Psyllid ID: psy12228

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MPGQSRTQHLFQVQLSAHTWSSSWKAFPLPSDLSTAAVLLPNLFWAFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLIFVF
Secondary Structure (PSIPRED)
ccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccEEEEEEEccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHccccccEEEEEEEEEEcccEEEEEEEcccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHccccccccccEEEEEccccEEEccccccEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHEEEEEEHcccccccccccccccccccccccHHHHccccccccccccccccccccHHHcccEcccccccEEEEEEcccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEccEEEEEccccccEEEEEcccccEHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHEEEEccccccccHccccEEEEcccccccccccccHHHHHcccccc
Coil and Loop (DISEMBL)
MPGQSRTQHLFQVQLSAHtwssswkafplpsdlstAAVLLPNLFWAFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLgvctqdgplyvivefaphgnlrdflrkhrpssgyesplgsaytngnvlteKDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDLCILVFfhdstllkTTSTIASLILRNQKVSVLLDLIFVF
Flexible Loop (DISEMBL)
MPGQSRTQHLFQVQLSAHTWSSSWKAFPLPSDLSTAAVLLPNLFWAFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLIFVF
Low Complexity Region (SEG)
MPGQSRTQHLFQVQLSAHTWSSSWKAFPLPSDLSTAAVLLPNLFWAFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLIFVF
Disordered region (IsUnstruct)
*********LFQVQLSAHTWSSSWKAFPLPSDLSTAAVLLPNLFWAFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLR************GSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLIFV*
Disordered Region (DISOPRED)
******************************************LFWAFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH*******************LTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLIFVF
Disordered Region (DISEMBL)
*********LFQVQLSAHTWSSSWKAFPLPSDLSTAAVLLPNLFWAFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLIFVF
Disordered Region (DISPRO)
****SRTQHLFQVQLSAHTWSSSWKAFPLPSDLSTAAVLLPNLFWAFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSG**********NGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLIFVF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPGQSRTQHLFQVQLSAHTWSSSWKAFPLPSDLSTAAVLLPNLFWAFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLIFVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	258	2.2.26 [Sep-21-2011]
Q26614	972	Fibroblast growth factor	yes	N/A	0.496	0.131	0.607	6e-37
Q07407	729	Fibroblast growth factor	yes	N/A	0.476	0.168	0.563	6e-36
Q09147	1052	Fibroblast growth factor	no	N/A	0.503	0.123	0.536	9e-36
Q498D6	800	Fibroblast growth factor	yes	N/A	0.496	0.16	0.587	7e-35
Q9I8X3	800	Fibroblast growth factor	yes	N/A	0.5	0.161	0.583	8e-35
Q8JG38	817	Fibroblast growth factor	no	N/A	0.5	0.157	0.590	2e-34
Q91287	796	Fibroblast growth factor	N/A	N/A	0.5	0.162	0.575	2e-34
Q91285	816	Fibroblast growth factor	N/A	N/A	0.496	0.156	0.564	2e-34
P16092	822	Fibroblast growth factor	yes	N/A	0.5	0.156	0.560	4e-34
P11362	822	Fibroblast growth factor	yes	N/A	0.5	0.156	0.560	4e-34

>sp|Q26614|FGFR_STRPU Fibroblast growth factor receptor OS=Strongylocentrotus purpuratus GN=FGFR PE=2 SV=1

 Score =  154 bits (389), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/130 (60%), Positives = 91/130 (70%), Gaps = 2/130 (1%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+  EA GI+ Q   +TVAVKMLK    D E  DL+SE+ MMKMIG++ NIINLLG
Sbjct: 649 AFGKVVIGEAVGIVCQEKTSTVAVKMLKANAMDREFSDLISELAMMKMIGKNPNIINLLG 708

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQ+GP YVIVEFA HGNLRDFLR  RP   YE  +    T    LT KDL+S AYQVA
Sbjct: 709 CCTQEGPPYVIVEFAHHGNLRDFLRSRRPPEEYEKSI--LLTTSQTLTNKDLMSMAYQVA 766

Query: 198 NGMHYLQSRK 207
            GM +L S+K
Sbjct: 767 RGMDFLASKK 776

Receptor for basic fibroblast growth factor.
Strongylocentrotus purpuratus (taxid: 7668)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 1

>sp|Q07407|FGFR1_DROME Fibroblast growth factor receptor homolog 1 OS=Drosophila melanogaster GN=htl PE=1 SV=3

 Score =  150 bits (380), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 75/133 (56%), Positives = 96/133 (72%), Gaps = 10/133 (7%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V+ AE N  +       VAVKM+KEGH+D ++  LV EME+MK+IG+HINIINLLG
Sbjct: 426 AFGRVVMAEVNNAI-------VAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLG 478

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRP---SSGYESPLGSAYTNGNVLTEKDLISFAY 194
            C+Q+GPLYVIVE+APHGNL+DFL K+RP       +S         +V+TEKDLI FA+
Sbjct: 479 CCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAH 538

Query: 195 QVANGMHYLQSRK 207
           Q+A GM YL SR+
Sbjct: 539 QIARGMDYLASRR 551

May be required for patterning of muscle precursor cells. May be essential for generation of mesodermal and endodermal layers, invaginations of various types of cells and CNS formation.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q09147|FGFR2_DROME Fibroblast growth factor receptor homolog 2 OS=Drosophila melanogaster GN=btl PE=2 SV=3

 Score =  150 bits (379), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/138 (53%), Positives = 96/138 (69%), Gaps = 8/138 (5%)

Query: 78  AFGKVICAEANGILK--QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ +  Q   T VAVKM+KE H+D +M  LV EME+MKMIG+HINIINL
Sbjct: 722 AFGRVVMAEAEGLPRSPQLAETIVAVKMVKEEHTDTDMASLVREMEVMKMIGKHINIINL 781

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLT------EKDL 189
           LG C+Q GPL+VIVE+APHGNL+DFL+++RP +         Y +   L       EK+L
Sbjct: 782 LGCCSQGGPLWVIVEYAPHGNLKDFLKQNRPGAPQRRSDSDGYLDDKPLISTQHLGEKEL 841

Query: 190 ISFAYQVANGMHYLQSRK 207
             FA+Q+A GM YL SR+
Sbjct: 842 TKFAFQIARGMEYLASRR 859

May be required for patterning of muscle precursor cells: generation of mesodermal and endodermal layers, invaginations of various types of cells, and CNS formation. Essential for the ability of the migrating tracheal and midline cells to recognize external guiding cues.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q498D6|FGFR4_RAT Fibroblast growth factor receptor 4 OS=Rattus norvegicus GN=Fgfr4 PE=1 SV=1

 Score =  147 bits (371), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 77/131 (58%), Positives = 95/131 (72%), Gaps = 3/131 (2%)

Query: 79  FGKVICAEANGI--LKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FG+V+ AEA G+   +    +TVAVKMLK+  SD ++ DL+SEMEMMK+IG+H NIINLL
Sbjct: 476 FGQVVRAEALGMDSSRPDQTSTVAVKMLKDNASDKDLADLISEMEMMKLIGRHKNIINLL 535

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           GVCTQ+GPLYVIVE+A  GNLR+FLR  RP     SP G   + G  L+   L+S AYQV
Sbjct: 536 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDLSPDGPRSSEGP-LSFPALVSCAYQV 594

Query: 197 ANGMHYLQSRK 207
           A GM YL+SRK
Sbjct: 595 ARGMQYLESRK 605

Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays a role in the regulation of cell proliferation, differentiation and migration, and in regulation of lipid metabolism, bile acid biosynthesis, glucose uptake, vitamin D metabolism and phosphate homeostasis. Required for normal down-regulation of the expression of CYP7A1, the rate-limiting enzyme in bile acid synthesis, in response to FGF19. Phosphorylates PLCG1 and FRS2. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. Promotes SRC-dependent phosphorylation of the matrix protease MMP14 and its lysosomal degradation. FGFR4 signaling is down-regulated by receptor internalization and degradation; MMP14 promotes internalization and degradation of FGFR4.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q9I8X3|FGFR3_DANRE Fibroblast growth factor receptor 3 OS=Danio rerio GN=fgfr3 PE=2 SV=1

 Score =  147 bits (371), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 77/132 (58%), Positives = 93/132 (70%), Gaps = 3/132 (2%)

Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            FG+V+ AEA GI K+      TVAVKMLK+  +D ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 470 CFGQVVMAEAIGIDKEKPNKPLTVAVKMLKDDGTDKDLSDLVSEMEMMKMIGKHKNIINL 529

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYV+VE+A  GNLR++LR  RP  G +    +       LT KDL+S AYQ
Sbjct: 530 LGACTQDGPLYVLVEYASKGNLREYLRARRP-PGMDYSFDTCKIPNETLTFKDLVSCAYQ 588

Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 589 VARGMEYLASKK 600

Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation and apoptosis. Plays an essential role in the regulation of chondrocyte differentiation, proliferation and apoptosis, and is required for normal skeleton development. Regulates both osteogenesis and postnatal bone mineralization by osteoblasts. Promotes apoptosis in chondrocytes, but can also promote cancer cell proliferation. Phosphorylates PLCG1, CBL and FRS2. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q8JG38|FGFR2_DANRE Fibroblast growth factor receptor 2 OS=Danio rerio GN=fgfr2 PE=1 SV=1

 Score =  146 bits (368), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/132 (59%), Positives = 92/132 (69%), Gaps = 3/132 (2%)

Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            FG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 487 CFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGRHKNIINL 546

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E     A  +   LT KDL+S  YQ
Sbjct: 547 LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDIARVSDEPLTFKDLVSCTYQ 605

Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 606 VARGMEYLASQK 617

Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation, migration and apoptosis, and in the regulation of embryonic development. Required for normal embryonic patterning, limb bud development, lung morphogenesis, osteogenesis and skin development. Plays an essential role in the regulation of osteoblast differentiation, proliferation and apoptosis, and is required for normal skeleton development. Promotes cell proliferation in keratinocytes and imature osteoblasts, but promotes apoptosis in differentiated osteoblasts. Phosphorylates PLCG1, FRS2 and PAK4. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. FGFR2 signaling is down-regulated by ubiquitination, internalization and degradation. Mutations that lead to constitutive kinase activation or impair normal FGFR2 maturation, internalization and degradation lead to aberrant signaling. Over-expressed FGFR2 promotes activation of STAT1.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q91287|FGFR3_PLEWA Fibroblast growth factor receptor 3 OS=Pleurodeles waltl GN=FGFR3 PE=2 SV=1

 Score =  145 bits (367), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 93/132 (70%), Gaps = 3/132 (2%)

Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            FG+V+ A+A GI K      T+VAVKMLK+  +D ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 467 CFGQVVMADAVGIEKDKPNKATSVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINL 526

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYV+VE+A  GNLR++LR  RP  G +    +       LT KDL+S AYQ
Sbjct: 527 LGACTQDGPLYVLVEYASKGNLREYLRARRP-PGMDYSFDTCKLPEEQLTFKDLVSCAYQ 585

Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 586 VARGMEYLASQK 597

Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation and apoptosis. Plays an essential role in the regulation of chondrocyte differentiation, proliferation and apoptosis, and is required for normal skeleton development. Regulates both osteogenesis and postnatal bone mineralization by osteoblasts. Promotes apoptosis in chondrocytes, but can also promote cancer cell proliferation. Phosphorylates PLCG1, CBL and FRS2. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway.

Pleurodeles waltl (taxid: 8319)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q91285|FGFR1_PLEWA Fibroblast growth factor receptor 1 OS=Pleurodeles waltl GN=FGFR1 PE=2 SV=1

 Score =  145 bits (366), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/131 (56%), Positives = 95/131 (72%), Gaps = 3/131 (2%)

Query: 79  FGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FG+V+  EA G+ K+    +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINLL
Sbjct: 485 FGQVVMGEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL 544

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CTQDGPLYVIVE+A  GNLR++LR  RP  G E      + + ++L+ KDL+S AYQV
Sbjct: 545 GACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYCYNPIHVSKDMLSFKDLVSCAYQV 603

Query: 197 ANGMHYLQSRK 207
           A GM YL S+K
Sbjct: 604 ARGMEYLASKK 614

Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of embryonic development, cell proliferation, differentiation and migration. Required for normal mesoderm patterning and normal skeletogenesis. Phosphorylates PLCG1, FRS2, GAB1 and SHB. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol-1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. Promotes phosphorylation of SHC1, STAT1 and PTPN11/SHP2. In the nucleus, enhances RPS6KA1 and CREB1 activity and contributes to the regulation of transcription. FGFR1 signaling is down-regulated by ubiquitination, internalization and degradation.

Pleurodeles waltl (taxid: 8319)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P16092|FGFR1_MOUSE Fibroblast growth factor receptor 1 OS=Mus musculus GN=Fgfr1 PE=1 SV=2

 Score =  145 bits (365), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 74/132 (56%), Positives = 93/132 (70%), Gaps = 3/132 (2%)

Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            FG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 488 CFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 547

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 548 LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYCYNPSHNPEEQLSSKDLVSCAYQ 606

Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 607 VARGMEYLASKK 618

Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of embryonic development, cell proliferation, differentiation and migration. Required for normal mesoderm patterning and correct axial organization during embryonic development, normal skeletogenesis and normal development of the gonadotropin-releasing hormone (GnRH) neuronal system. Phosphorylates PLCG1, FRS2, GAB1 and SHB. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. Promotes phosphorylation of SHC1, STAT1 and PTPN11/SHP2. In the nucleus, enhances RPS6KA1 and CREB1 activity and contributes to the regulation of transcription. FGFR1 signaling is down-regulated by IL17RD/SEF, and by FGFR1 ubiquitination, internalization and degradation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P11362|FGFR1_HUMAN Fibroblast growth factor receptor 1 OS=Homo sapiens GN=FGFR1 PE=1 SV=3

 Score =  145 bits (365), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 74/132 (56%), Positives = 93/132 (70%), Gaps = 3/132 (2%)

Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            FG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 488 CFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 547

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 548 LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYCYNPSHNPEEQLSSKDLVSCAYQ 606

Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 607 VARGMEYLASKK 618

Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of embryonic development, cell proliferation, differentiation and migration. Required for normal mesoderm patterning and correct axial organization during embryonic development, normal skeletogenesis and normal development of the gonadotropin-releasing hormone (GnRH) neuronal system. Phosphorylates PLCG1, FRS2, GAB1 and SHB. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. Promotes phosphorylation of SHC1, STAT1 and PTPN11/SHP2. In the nucleus, enhances RPS6KA1 and CREB1 activity and contributes to the regulation of transcription. FGFR1 signaling is down-regulated by IL17RD/SEF, and by FGFR1 ubiquitination, internalization and degradation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
242021541	682	tyrosine kinase receptor, putative [Pedi	0.503	0.190	0.730	8e-52
328715620	1026	PREDICTED: basic fibroblast growth facto	0.496	0.124	0.738	7e-50
328715622	1025	PREDICTED: basic fibroblast growth facto	0.496	0.124	0.738	7e-50
307182745	865	Fibroblast growth factor receptor 1 [Cam	0.5	0.149	0.723	2e-49
270015126	963	heartless [Tribolium castaneum]	0.507	0.136	0.717	3e-49
189233623	955	PREDICTED: similar to fibroblast growth	0.503	0.136	0.723	4e-49
383866193	830	PREDICTED: fibroblast growth factor rece	0.5	0.155	0.730	4e-49
380024261	825	PREDICTED: fibroblast growth factor rece	0.5	0.156	0.730	5e-49
350405269	824	PREDICTED: fibroblast growth factor rece	0.5	0.156	0.730	5e-49
340726269	830	PREDICTED: fibroblast growth factor rece	0.5	0.155	0.730	5e-49

>gi|242021541|ref|XP_002431203.1| tyrosine kinase receptor, putative [Pediculus humanus corporis] gi|212516452|gb|EEB18465.1| tyrosine kinase receptor, putative [Pediculus humanus corporis]

 Score =  209 bits (532), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 112/130 (86%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ AEA GI+KQG+ + VAVKMLK+GH+DAEMMDLVSEME+MKMIG+HINIINLLG
Sbjct: 372 AFGKVVKAEAKGIVKQGVTSVVAVKMLKDGHTDAEMMDLVSEMELMKMIGKHINIINLLG 431

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQDGPLYVIVE+AP+GNLR++LR+HRP SGYE  +G+       LT+KDL+SFAYQVA
Sbjct: 432 CCTQDGPLYVIVEYAPNGNLREYLRQHRPCSGYEPGIGTGLKERKTLTQKDLVSFAYQVA 491

Query: 198 NGMHYLQSRK 207
            GM YL SRK
Sbjct: 492 RGMEYLASRK 501

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328715620|ref|XP_001943155.2| PREDICTED: basic fibroblast growth factor receptor 1-A-like isoform 1 [Acyrthosiphon pisum]

 Score =  203 bits (516), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 96/130 (73%), Positives = 111/130 (85%), Gaps = 2/130 (1%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+  EA+GIL + ++ TVAVKMLK+GH+D EMMDLVSEMEMMKMIG+H+NIINLLG
Sbjct: 722 AFGKVLRGEADGILCENVMHTVAVKMLKDGHTDTEMMDLVSEMEMMKMIGKHVNIINLLG 781

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQDGPLYV+VEFA HGNLRDFLR+HRPSSGYE  +GS     + LT+KDL+SFAYQVA
Sbjct: 782 CCTQDGPLYVLVEFALHGNLRDFLRQHRPSSGYEPAIGSNLK--DTLTQKDLVSFAYQVA 839

Query: 198 NGMHYLQSRK 207
            GM YL SRK
Sbjct: 840 RGMEYLASRK 849

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328715622|ref|XP_003245675.1| PREDICTED: basic fibroblast growth factor receptor 1-A-like isoform 2 [Acyrthosiphon pisum]

 Score =  203 bits (516), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 96/130 (73%), Positives = 111/130 (85%), Gaps = 2/130 (1%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+  EA+GIL + ++ TVAVKMLK+GH+D EMMDLVSEMEMMKMIG+H+NIINLLG
Sbjct: 721 AFGKVLRGEADGILCENVMHTVAVKMLKDGHTDTEMMDLVSEMEMMKMIGKHVNIINLLG 780

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQDGPLYV+VEFA HGNLRDFLR+HRPSSGYE  +GS     + LT+KDL+SFAYQVA
Sbjct: 781 CCTQDGPLYVLVEFALHGNLRDFLRQHRPSSGYEPAIGSNLK--DTLTQKDLVSFAYQVA 838

Query: 198 NGMHYLQSRK 207
            GM YL SRK
Sbjct: 839 RGMEYLASRK 848

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307182745|gb|EFN69869.1| Fibroblast growth factor receptor 1 [Camponotus floridanus]

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/130 (72%), Positives = 106/130 (81%), Gaps = 1/130 (0%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ AE N   K GI + VAVKMLKEGH+D EMMDLVSEMEMMKMIG+H+NIINLLG
Sbjct: 556 AFGKVVRAETN-TGKSGIPSVVAVKMLKEGHTDTEMMDLVSEMEMMKMIGKHVNIINLLG 614

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQ+GPLYV+VEFAPHGNLRDFLR HRP+SGYE  +G        LT+KDL+SFAYQVA
Sbjct: 615 ACTQNGPLYVVVEFAPHGNLRDFLRDHRPTSGYEPTIGQESKERKTLTQKDLVSFAYQVA 674

Query: 198 NGMHYLQSRK 207
            GM YL SR+
Sbjct: 675 RGMEYLASRR 684

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270015126|gb|EFA11574.1| heartless [Tribolium castaneum]

 Score =  201 bits (510), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 94/131 (71%), Positives = 107/131 (81%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ AEA G+LK G  + VAVKMLKEGH+D EMMDLVSEMEMMKMIG+H NIINLLG
Sbjct: 645 AFGKVVKAEAVGLLKPGASSIVAVKMLKEGHTDNEMMDLVSEMEMMKMIGKHNNIINLLG 704

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQ GPLYV+VE+AP+GNLRDFLR+HRPSSGYE  +G        LT+KDL+SFAYQVA
Sbjct: 705 CCTQGGPLYVVVEYAPYGNLRDFLRQHRPSSGYEPAIGLEEKEKKTLTQKDLVSFAYQVA 764

Query: 198 NGMHYLQSRKV 208
            GM YL SR+ 
Sbjct: 765 RGMEYLASRRC 775

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189233623|ref|XP_970831.2| PREDICTED: similar to fibroblast growth factor receptor [Tribolium castaneum]

 Score =  201 bits (510), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 94/130 (72%), Positives = 107/130 (82%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ AEA G+LK G  + VAVKMLKEGH+D EMMDLVSEMEMMKMIG+H NIINLLG
Sbjct: 637 AFGKVVKAEAVGLLKPGASSIVAVKMLKEGHTDNEMMDLVSEMEMMKMIGKHNNIINLLG 696

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQ GPLYV+VE+AP+GNLRDFLR+HRPSSGYE  +G        LT+KDL+SFAYQVA
Sbjct: 697 CCTQGGPLYVVVEYAPYGNLRDFLRQHRPSSGYEPAIGLEEKEKKTLTQKDLVSFAYQVA 756

Query: 198 NGMHYLQSRK 207
            GM YL SR+
Sbjct: 757 RGMEYLASRR 766

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866193|ref|XP_003708555.1| PREDICTED: fibroblast growth factor receptor homolog 1-like [Megachile rotundata]

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 105/130 (80%), Gaps = 1/130 (0%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A+ N   K GI   VAVKMLKEGH+DAEMMDLVSEMEMMKMIG+H+NIINLLG
Sbjct: 520 AFGKVVRAQTN-TGKPGIPNVVAVKMLKEGHTDAEMMDLVSEMEMMKMIGKHVNIINLLG 578

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQ GPLYV+VEFAPHGNLRDFLR HRPSSGYE  +G        LT+KDL+SFAYQVA
Sbjct: 579 ACTQGGPLYVVVEFAPHGNLRDFLRDHRPSSGYEPTIGQEPKEKKTLTQKDLVSFAYQVA 638

Query: 198 NGMHYLQSRK 207
            GM YL SR+
Sbjct: 639 RGMEYLASRR 648

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024261|ref|XP_003695922.1| PREDICTED: fibroblast growth factor receptor homolog 1-like [Apis florea]

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 105/130 (80%), Gaps = 1/130 (0%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A+ N   K GI   VAVKMLKEGH+DAEMMDLVSEMEMMKMIG+H+NIINLLG
Sbjct: 515 AFGKVVRAQTN-TGKPGIPCVVAVKMLKEGHTDAEMMDLVSEMEMMKMIGKHVNIINLLG 573

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQ GPLYV+VEFAPHGNLRDFLR HRPSSGYE  +G        LT+KDL+SFAYQVA
Sbjct: 574 ACTQGGPLYVVVEFAPHGNLRDFLRDHRPSSGYEPTIGQEPKEKKTLTQKDLVSFAYQVA 633

Query: 198 NGMHYLQSRK 207
            GM YL SR+
Sbjct: 634 RGMEYLASRR 643

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350405269|ref|XP_003487380.1| PREDICTED: fibroblast growth factor receptor homolog 1-like [Bombus impatiens]

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 105/130 (80%), Gaps = 1/130 (0%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A+ N   K GI   VAVKMLKEGH+DAEMMDLVSEMEMMKMIG+H+NIINLLG
Sbjct: 514 AFGKVVRAQTN-TGKPGIPCVVAVKMLKEGHTDAEMMDLVSEMEMMKMIGKHVNIINLLG 572

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQ GPLYV+VEFAPHGNLRDFLR HRPSSGYE  +G        LT+KDL+SFAYQVA
Sbjct: 573 ACTQGGPLYVVVEFAPHGNLRDFLRDHRPSSGYEPTIGQEPKEKKTLTQKDLVSFAYQVA 632

Query: 198 NGMHYLQSRK 207
            GM YL SR+
Sbjct: 633 RGMEYLASRR 642

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726269|ref|XP_003401483.1| PREDICTED: fibroblast growth factor receptor homolog 1-like [Bombus terrestris]

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 105/130 (80%), Gaps = 1/130 (0%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A+ N   K GI   VAVKMLKEGH+DAEMMDLVSEMEMMKMIG+H+NIINLLG
Sbjct: 520 AFGKVVRAQTN-TGKPGIPCVVAVKMLKEGHTDAEMMDLVSEMEMMKMIGKHVNIINLLG 578

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CTQ GPLYV+VEFAPHGNLRDFLR HRPSSGYE  +G        LT+KDL+SFAYQVA
Sbjct: 579 ACTQGGPLYVVVEFAPHGNLRDFLRDHRPSSGYEPTIGQEPKEKKTLTQKDLVSFAYQVA 638

Query: 198 NGMHYLQSRK 207
            GM YL SR+
Sbjct: 639 RGMEYLASRR 648

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
FB|FBgn0010389	729	htl "heartless" [Drosophila me	0.476	0.168	0.563	2.9e-32
UNIPROTKB|K7GKB5	246	FGFR4 "Uncharacterized protein	0.496	0.520	0.587	3.7e-32
ZFIN|ZDB-GENE-000816-1	804	fgfr3 "fibroblast growth facto	0.496	0.159	0.587	1e-31
UNIPROTKB|F1MN51	800	FGFR4 "Fibroblast growth facto	0.496	0.16	0.595	1.3e-31
UNIPROTKB|Q91285	816	FGFR1 "Fibroblast growth facto	0.496	0.156	0.564	2.3e-31
FB|FBgn0005592	1052	btl "breathless" [Drosophila m	0.488	0.119	0.549	3e-31
UNIPROTKB|K7GRT5	754	FGFR4 "Fibroblast growth facto	0.496	0.169	0.587	3.1e-31
ZFIN|ZDB-GENE-030323-1	840	fgfr2 "fibroblast growth facto	0.496	0.152	0.595	3.1e-31
UNIPROTKB|F1NCL8	770	FGFR3 "Fibroblast growth facto	0.496	0.166	0.587	3.2e-31
UNIPROTKB|H0Y9P2	280	FGFR4 "Fibroblast growth facto	0.496	0.457	0.587	3.3e-31

FB|FBgn0010389 htl "heartless" [Drosophila melanogaster (taxid:7227)]

 Score = 361 (132.1 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 75/133 (56%), Positives = 96/133 (72%)

Query:    78 AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
             AFG+V+ AE N  +       VAVKM+KEGH+D ++  LV EME+MK+IG+HINIINLLG
Sbjct:   426 AFGRVVMAEVNNAI-------VAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLG 478

Query:   138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRP---SSGYESPLGSAYTNGNVLTEKDLISFAY 194
              C+Q+GPLYVIVE+APHGNL+DFL K+RP       +S         +V+TEKDLI FA+
Sbjct:   479 CCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAH 538

Query:   195 QVANGMHYLQSRK 207
             Q+A GM YL SR+
Sbjct:   539 QIARGMDYLASRR 551

GO:0005007 "fibroblast growth factor-activated receptor activity" evidence=ISS;NAS;TAS

GO:0007417 "central nervous system development" evidence=IEP;NAS;IMP

GO:0007500 "mesodermal cell fate determination" evidence=IEP

GO:0005886 "plasma membrane" evidence=ISS

GO:0007493 "endodermal cell fate determination" evidence=IEP

GO:0007507 "heart development" evidence=IEP;NAS;IMP;TAS

GO:0004713 "protein tyrosine kinase activity" evidence=ISS;NAS

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=ISS;TAS

GO:0006468 "protein phosphorylation" evidence=ISS;NAS

GO:0016021 "integral to membrane" evidence=ISS;NAS

GO:0008078 "mesodermal cell migration" evidence=IMP;TAS

GO:0001710 "mesodermal cell fate commitment" evidence=IGI;IMP

GO:0007525 "somatic muscle development" evidence=IMP

GO:0008347 "glial cell migration" evidence=IMP

GO:0007522 "visceral muscle development" evidence=IMP

GO:0007506 "gonadal mesoderm development" evidence=IMP

GO:0008354 "germ cell migration" evidence=IMP;TAS

GO:0007509 "mesoderm migration involved in gastrulation" evidence=IMP;NAS;TAS

GO:0008406 "gonad development" evidence=TAS

GO:0007280 "pole cell migration" evidence=TAS

GO:0007369 "gastrulation" evidence=NAS

GO:0007498 "mesoderm development" evidence=NAS

GO:0007517 "muscle organ development" evidence=NAS

GO:0007492 "endoderm development" evidence=NAS

GO:0007523 "larval visceral muscle development" evidence=IMP

GO:0016477 "cell migration" evidence=TAS

GO:0007431 "salivary gland development" evidence=TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005003 "ephrin receptor activity" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0061320 "pericardial nephrocyte differentiation" evidence=IMP

GO:0048542 "lymph gland development" evidence=IMP

GO:0010002 "cardioblast differentiation" evidence=IMP

GO:0007419 "ventral cord development" evidence=IMP

GO:0048747 "muscle fiber development" evidence=IMP

GO:0010001 "glial cell differentiation" evidence=IMP

UNIPROTKB|K7GKB5 FGFR4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 77/131 (58%), Positives = 95/131 (72%)

Query:    79 FGKVICAEANGI--LKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
             FG+V+CAEA G+   +    +TVAVKMLK+  SD ++ DLVSEME+MK+IG+H NIINLL
Sbjct:   109 FGQVVCAEAFGMDPTRPDQASTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLL 168

Query:   137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
             GVCTQ+GPLYVIVE A  GNLR+FLR  RP     SP G   + G  L+   L+S AYQV
Sbjct:   169 GVCTQEGPLYVIVECAAKGNLREFLRARRPPGPDLSPDGPRSSEGP-LSFPALVSCAYQV 227

Query:   197 ANGMHYLQSRK 207
             A GM YL+S+K
Sbjct:   228 ARGMQYLESQK 238

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

ZFIN|ZDB-GENE-000816-1 fgfr3 "fibroblast growth factor receptor 3" [Danio rerio (taxid:7955)]

 Score = 357 (130.7 bits), Expect = 1.0e-31, P = 1.0e-31
 Identities = 77/131 (58%), Positives = 93/131 (70%)

Query:    79 FGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
             FG+V+ AEA GI K+      TVAVKMLK+  +D ++ DLVSEMEMMKMIG+H NIINLL
Sbjct:   475 FGQVVMAEAIGIDKEKPNKPLTVAVKMLKDDGTDKDLSDLVSEMEMMKMIGKHKNIINLL 534

Query:   137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
             G CTQDGPLYV+VE+A  GNLR++LR  RP  G +    +       LT KDL+S AYQV
Sbjct:   535 GACTQDGPLYVLVEYASKGNLREYLRARRPP-GMDYSFDTCKIPNETLTFKDLVSCAYQV 593

Query:   197 ANGMHYLQSRK 207
             A GM YL S+K
Sbjct:   594 ARGMEYLASKK 604

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005007 "fibroblast growth factor-activated receptor activity" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

UNIPROTKB|F1MN51 FGFR4 "Fibroblast growth factor receptor" [Bos taurus (taxid:9913)]

 Score = 356 (130.4 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 78/131 (59%), Positives = 95/131 (72%)

Query:    79 FGKVICAEANGI--LKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
             FG+V+CAEA G+   +    +TVAVKMLK+  SD ++ DLVSEME+MK+IG+H NIINLL
Sbjct:   477 FGQVVCAEAFGMDPTRPDQASTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLL 536

Query:   137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
             GVCTQ+GPLYVIVE A  GNLR+FLR  RP     SP G   + G  L+   L+S AYQV
Sbjct:   537 GVCTQEGPLYVIVECAAKGNLREFLRARRPPGPDLSPDGPRSSEGP-LSFPALVSCAYQV 595

Query:   197 ANGMHYLQSRK 207
             A GM YL+SRK
Sbjct:   596 ARGMQYLESRK 606

GO:2000573 "positive regulation of DNA biosynthetic process" evidence=IEA

GO:2000188 "regulation of cholesterol homeostasis" evidence=IEA

GO:0070857 "regulation of bile acid biosynthetic process" evidence=IEA

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=IEA

GO:0061144 "alveolar secondary septum development" evidence=IEA

GO:0055062 "phosphate ion homeostasis" evidence=IEA

GO:0048554 "positive regulation of metalloenzyme activity" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045862 "positive regulation of proteolysis" evidence=IEA

GO:0042593 "glucose homeostasis" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0017134 "fibroblast growth factor binding" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0010715 "regulation of extracellular matrix disassembly" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001759 "organ induction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005007 "fibroblast growth factor-activated receptor activity" evidence=IEA

UNIPROTKB|Q91285 FGFR1 "Fibroblast growth factor receptor 1" [Pleurodeles waltl (taxid:8319)]

 Score = 354 (129.7 bits), Expect = 2.3e-31, P = 2.3e-31
 Identities = 74/131 (56%), Positives = 95/131 (72%)

Query:    79 FGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
             FG+V+  EA G+ K+    +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINLL
Sbjct:   485 FGQVVMGEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL 544

Query:   137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
             G CTQDGPLYVIVE+A  GNLR++LR  RP  G E      + + ++L+ KDL+S AYQV
Sbjct:   545 GACTQDGPLYVIVEYASKGNLREYLRARRPP-GMEYCYNPIHVSKDMLSFKDLVSCAYQV 603

Query:   197 ANGMHYLQSRK 207
             A GM YL S+K
Sbjct:   604 ARGMEYLASKK 614

GO:0005007 "fibroblast growth factor-activated receptor activity" evidence=ISS

FB|FBgn0005592 btl "breathless" [Drosophila melanogaster (taxid:7227)]

 Score = 355 (130.0 bits), Expect = 3.0e-31, P = 3.0e-31
 Identities = 78/142 (54%), Positives = 100/142 (70%)

Query:    78 AFGKVICAEANGILKQGII--TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
             AFG+V+ AEA G+ +   +  T VAVKM+KE H+D +M  LV EME+MKMIG+HINIINL
Sbjct:   722 AFGRVVMAEAEGLPRSPQLAETIVAVKMVKEEHTDTDMASLVREMEVMKMIGKHINIINL 781

Query:   136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRP--------SSGY--ESPLGSAYTNGNVLT 185
             LG C+Q GPL+VIVE+APHGNL+DFL+++RP        S GY  + PL S    G    
Sbjct:   782 LGCCSQGGPLWVIVEYAPHGNLKDFLKQNRPGAPQRRSDSDGYLDDKPLISTQHLG---- 837

Query:   186 EKDLISFAYQVANGMHYLQSRK 207
             EK+L  FA+Q+A GM YL SR+
Sbjct:   838 EKELTKFAFQIARGMEYLASRR 859

GO:0005886 "plasma membrane" evidence=IC;ISS;NAS

GO:0005007 "fibroblast growth factor-activated receptor activity" evidence=ISS;TAS

GO:0007427 "epithelial cell migration, open tracheal system" evidence=IMP;TAS

GO:0007424 "open tracheal system development" evidence=IEP;NAS;TAS

GO:0008347 "glial cell migration" evidence=IMP

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0007430 "terminal branching, open tracheal system" evidence=IMP;TAS

GO:0007428 "primary branching, open tracheal system" evidence=IMP;TAS

GO:0007429 "secondary branching, open tracheal system" evidence=IMP;TAS

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=NAS;TAS

GO:0004713 "protein tyrosine kinase activity" evidence=NAS

GO:0007498 "mesoderm development" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0007517 "muscle organ development" evidence=NAS

GO:0007417 "central nervous system development" evidence=NAS

GO:0007492 "endoderm development" evidence=NAS

GO:0001763 "morphogenesis of a branching structure" evidence=TAS

GO:0007435 "salivary gland morphogenesis" evidence=NAS

GO:0000187 "activation of MAPK activity" evidence=IEP

GO:0035215 "genital disc development" evidence=IEP

GO:0007426 "tracheal outgrowth, open tracheal system" evidence=IMP

GO:0046847 "filopodium assembly" evidence=IMP

GO:0005003 "ephrin receptor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0030517 "negative regulation of axon extension" evidence=IMP

GO:0035153 "epithelial cell type specification, open tracheal system" evidence=IMP

GO:0060439 "trachea morphogenesis" evidence=IMP

GO:0060446 "branching involved in open tracheal system development" evidence=IMP

UNIPROTKB|K7GRT5 FGFR4 "Fibroblast growth factor receptor" [Sus scrofa (taxid:9823)]

 Score = 352 (129.0 bits), Expect = 3.1e-31, P = 3.1e-31
 Identities = 77/131 (58%), Positives = 95/131 (72%)

Query:    79 FGKVICAEANGI--LKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
             FG+V+CAEA G+   +    +TVAVKMLK+  SD ++ DLVSEME+MK+IG+H NIINLL
Sbjct:   478 FGQVVCAEAFGMDPTRPDQASTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLL 537

Query:   137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
             GVCTQ+GPLYVIVE A  GNLR+FLR  RP     SP G   + G  L+   L+S AYQV
Sbjct:   538 GVCTQEGPLYVIVECAAKGNLREFLRARRPPGPDLSPDGPRSSEGP-LSFPALVSCAYQV 596

Query:   197 ANGMHYLQSRK 207
             A GM YL+S+K
Sbjct:   597 ARGMQYLESQK 607

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0005007 "fibroblast growth factor-activated receptor activity" evidence=IEA

ZFIN|ZDB-GENE-030323-1 fgfr2 "fibroblast growth factor receptor 2" [Danio rerio (taxid:7955)]

 Score = 353 (129.3 bits), Expect = 3.1e-31, P = 3.1e-31
 Identities = 78/131 (59%), Positives = 92/131 (70%)

Query:    79 FGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
             FG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINLL
Sbjct:   511 FGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGRHKNIINLL 570

Query:   137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
             G CTQDGPLYVIVE+A  GNLR++LR  RP  G E     A  +   LT KDL+S  YQV
Sbjct:   571 GACTQDGPLYVIVEYASKGNLREYLRARRPP-GMEYSYDIARVSDEPLTFKDLVSCTYQV 629

Query:   197 ANGMHYLQSRK 207
             A GM YL S+K
Sbjct:   630 ARGMEYLASQK 640

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005007 "fibroblast growth factor-activated receptor activity" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0017134 "fibroblast growth factor binding" evidence=IDA

GO:0003146 "heart jogging" evidence=IMP

GO:0001947 "heart looping" evidence=IMP

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

UNIPROTKB|F1NCL8 FGFR3 "Fibroblast growth factor receptor" [Gallus gallus (taxid:9031)]

 Score = 352 (129.0 bits), Expect = 3.2e-31, P = 3.2e-31
 Identities = 77/131 (58%), Positives = 92/131 (70%)

Query:    79 FGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
             FG+V+ AEA GI K       TVAVKMLK+  +D ++ DLVSEMEMMKMIG+H NIINLL
Sbjct:   441 FGQVVMAEAIGIDKDKPNKAITVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLL 500

Query:   137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
             G CTQDGPLYV+VE+A  GNLR++LR  RP  G +    +       LT KDL+S AYQV
Sbjct:   501 GACTQDGPLYVLVEYASKGNLREYLRARRPP-GMDYSFDTCKLPEEQLTFKDLVSCAYQV 559

Query:   197 ANGMHYLQSRK 207
             A GM YL S+K
Sbjct:   560 ARGMEYLASQK 570

GO:0005007 "fibroblast growth factor-activated receptor activity" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|H0Y9P2 FGFR4 "Fibroblast growth factor receptor 4" [Homo sapiens (taxid:9606)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 77/131 (58%), Positives = 94/131 (71%)

Query:    79 FGKVICAEANGI--LKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
             FG+V+ AEA G+   +    +TVAVKMLK+  SD ++ DLVSEME+MK+IG+H NIINLL
Sbjct:   110 FGQVVRAEAFGMDPARPDQASTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLL 169

Query:   137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
             GVCTQ+GPLYVIVE A  GNLR+FLR  RP     SP G   + G  L+   L+S AYQV
Sbjct:   170 GVCTQEGPLYVIVECAAKGNLREFLRARRPPGPDLSPDGPRSSEGP-LSFPVLVSCAYQV 228

Query:   197 ANGMHYLQSRK 207
             A GM YL+SRK
Sbjct:   229 ARGMQYLESRK 239

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q498D6	FGFR4_RAT	2, ., 7, ., 1, 0, ., 1	0.5877	0.4961	0.16	yes	N/A
P16092	FGFR1_MOUSE	2, ., 7, ., 1, 0, ., 1	0.5606	0.5	0.1569	yes	N/A
Q26614	FGFR_STRPU	2, ., 7, ., 1, 0, ., 1	0.6076	0.4961	0.1316	yes	N/A
Q9I8X3	FGFR3_DANRE	2, ., 7, ., 1, 0, ., 1	0.5833	0.5	0.1612	yes	N/A
P11362	FGFR1_HUMAN	2, ., 7, ., 1, 0, ., 1	0.5606	0.5	0.1569	yes	N/A
P18460	FGFR3_CHICK	2, ., 7, ., 1, 0, ., 1	0.5833	0.5	0.1600	yes	N/A
Q07407	FGFR1_DROME	2, ., 7, ., 1, 0, ., 1	0.5639	0.4767	0.1687	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	258
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-62
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	8e-48
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-47
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	6e-45
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	6e-45
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-43
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	5e-43
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-42
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	9e-41
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	7e-34
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-32
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-30
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	2e-28
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	4e-28
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-27
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	7e-26
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	1e-25
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-25
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-24
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-24
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	5e-24
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-22
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-21
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	6e-20
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-19
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-19
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-19
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-19
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	7e-19
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	9e-19
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-18
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-18
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-18
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-16
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	3e-16
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-16
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	6e-16
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-15
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-15
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	4e-15
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-15
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	7e-15
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-14
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-14
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-13
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-13
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-13
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-13
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	4e-13
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-13
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-12
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	3e-12
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-12
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-11
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-11
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-11
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-11
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	4e-11
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	5e-11
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	1e-10
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-10
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-10
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	3e-10
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-10
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-10
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	4e-10
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	6e-10
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	1e-09
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-09
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-09
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-09
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-09
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-09
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	5e-09
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	5e-09
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	9e-09
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	9e-09
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-08
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	6e-08
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	7e-08
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-08
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	9e-08
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-07
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	1e-06
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-06
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	3e-06
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	3e-06
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	4e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	5e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	7e-06
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	9e-06
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-05
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	3e-05
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	3e-05
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-04
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.001
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.001
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	0.003
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.004

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score =  198 bits (504), Expect = 1e-62
 Identities = 80/130 (61%), Positives = 97/130 (74%), Gaps = 1/130 (0%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V+ AEA G+      +TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINLLG
Sbjct: 24  AFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 83

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCTQ+GPLYV+VE+A HGNLRDFLR  RP   Y SP          LT+KDL+SFAYQVA
Sbjct: 84  VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEET-LTQKDLVSFAYQVA 142

Query: 198 NGMHYLQSRK 207
            GM +L S+K
Sbjct: 143 RGMEFLASKK 152

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score =  160 bits (406), Expect = 8e-48
 Identities = 74/131 (56%), Positives = 93/131 (70%), Gaps = 3/131 (2%)

Query: 79  FGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FG+V+ AEA GI K       TVAVKMLK+  +D ++ DL+SEME+MK+IG+H NIINLL
Sbjct: 25  FGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLL 84

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           GVCTQ+GPLYVIVE+A  GNLR+FLR  RP     +   +       L+ KDL+S AYQV
Sbjct: 85  GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ-LSFKDLVSCAYQV 143

Query: 197 ANGMHYLQSRK 207
           A GM YL+SR+
Sbjct: 144 ARGMEYLESRR 154

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  156 bits (397), Expect = 7e-47
 Identities = 55/133 (41%), Positives = 78/133 (58%), Gaps = 11/133 (8%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           + AFG+V   +  G   +   T VAVK LKE  S+ E  D + E  +MK +G H N++ L
Sbjct: 5   EGAFGEVYKGKLKGKDGKT--TEVAVKTLKEDASEEERKDFLKEARVMKKLG-HPNVVRL 61

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LGVCT++ PLY+++E+   G+L D+LRK RP               + L+ KDL+SFA Q
Sbjct: 62  LGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEK--------STLSLKDLLSFAIQ 113

Query: 196 VANGMHYLQSRKV 208
           +A GM YL S+K 
Sbjct: 114 IAKGMEYLASKKF 126

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score =  152 bits (386), Expect = 6e-45
 Identities = 75/132 (56%), Positives = 92/132 (69%), Gaps = 3/132 (2%)

Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            FG+V+ AEA G+ K+    +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 30  CFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 89

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            L+ KDL+S AYQ
Sbjct: 90  LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYCYNPTQVPEEQLSFKDLVSCAYQ 148

Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 149 VARGMEYLASKK 160

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score =  153 bits (388), Expect = 6e-45
 Identities = 77/131 (58%), Positives = 92/131 (70%), Gaps = 3/131 (2%)

Query: 79  FGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FG+V+ AEA GI K       TVAVKMLK+  +D ++ DLVSEMEMMKMIG+H NIINLL
Sbjct: 25  FGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLL 84

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CTQDGPLYV+VE+A  GNLR++LR  RP  G +    +       LT KDL+S AYQV
Sbjct: 85  GACTQDGPLYVLVEYASKGNLREYLRARRP-PGMDYSFDTCKLPEEQLTFKDLVSCAYQV 143

Query: 197 ANGMHYLQSRK 207
           A GM YL S+K
Sbjct: 144 ARGMEYLASQK 154

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  146 bits (372), Expect = 3e-43
 Identities = 49/133 (36%), Positives = 75/133 (56%), Gaps = 17/133 (12%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           + AFG+V      G      +  VAVK LKE  S+ ++ + + E  +M+ +  H NI+ L
Sbjct: 9   EGAFGEVYKGTLKGKGDGKEVE-VAVKTLKEDASEQQIEEFLREARIMRKL-DHPNIVKL 66

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LGVCT++ PL +++E+ P G+L D+LRK+RP                 L+  DL+SFA Q
Sbjct: 67  LGVCTEEEPLMIVMEYMPGGDLLDYLRKNRP---------------KELSLSDLLSFALQ 111

Query: 196 VANGMHYLQSRKV 208
           +A GM YL+S+  
Sbjct: 112 IARGMEYLESKNF 124

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score =  147 bits (373), Expect = 5e-43
 Identities = 77/131 (58%), Positives = 91/131 (69%), Gaps = 3/131 (2%)

Query: 79  FGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINLL
Sbjct: 28  FGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 87

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CTQDGPLYVIVE+A  GNLR++LR  RP  G E     A      +T KDL+S  YQV
Sbjct: 88  GACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDIARVPDEQMTFKDLVSCTYQV 146

Query: 197 ANGMHYLQSRK 207
           A GM YL S+K
Sbjct: 147 ARGMEYLASQK 157

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  144 bits (365), Expect = 3e-42
 Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 18/133 (13%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           + AFG+V   +  G   +  +  VAVK LKE  S+ ++ + + E  +M+ +  H N++ L
Sbjct: 9   EGAFGEVYKGKLKGKGGKKKVE-VAVKTLKEDASEQQIEEFLREARIMRKL-DHPNVVKL 66

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LGVCT++ PLY+++E+   G+L  +LRK+RP                 L+  DL+SFA Q
Sbjct: 67  LGVCTEEEPLYIVMEYMEGGDLLSYLRKNRP----------------KLSLSDLLSFALQ 110

Query: 196 VANGMHYLQSRKV 208
           +A GM YL+S+  
Sbjct: 111 IARGMEYLESKNF 123

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  140 bits (356), Expect = 9e-41
 Identities = 56/131 (42%), Positives = 72/131 (54%), Gaps = 18/131 (13%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V      G   +G  T VAVK LKEG S+ E  + + E  +MK +  H NI+ LLG
Sbjct: 11  AFGEVYKGTLKG-DGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKL-SHPNIVRLLG 68

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCTQ  PLY++ E+ P G+L DFLRKH                   LT KDL+  A Q+A
Sbjct: 69  VCTQGEPLYIVTEYMPGGDLLDFLRKHGEK----------------LTLKDLLQMALQIA 112

Query: 198 NGMHYLQSRKV 208
            GM YL+S+  
Sbjct: 113 KGMEYLESKNF 123

Length = 258

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score =  123 bits (311), Expect = 7e-34
 Identities = 57/129 (44%), Positives = 78/129 (60%), Gaps = 15/129 (11%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A G+ K   +  VAVKMLK     +E   L+SE+++M  +G H NI+NLLG
Sbjct: 47  AFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLG 106

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CT  GP+ VI E+  +G+L +FLR+ R S                LT +DL+SF+YQVA
Sbjct: 107 ACTIGGPILVITEYCCYGDLLNFLRRKRES---------------FLTLEDLLSFSYQVA 151

Query: 198 NGMHYLQSR 206
            GM +L S+
Sbjct: 152 KGMAFLASK 160

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score =  118 bits (298), Expect = 4e-32
 Identities = 60/137 (43%), Positives = 84/137 (61%), Gaps = 8/137 (5%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FGKV+ A A  +  +   TTVAVKMLKE  S +E+ DL+SE  ++K +  H ++I L G 
Sbjct: 13  FGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV-NHPHVIKLYGA 71

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRP-SSGYESPLGSAYTNG------NVLTEKDLIS 191
           C+QDGPL +IVE+A +G+LR FLR+ R     Y    G+  ++         LT  DLIS
Sbjct: 72  CSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLIS 131

Query: 192 FAYQVANGMHYLQSRKV 208
           FA+Q++ GM YL   K+
Sbjct: 132 FAWQISRGMQYLAEMKL 148

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score =  116 bits (291), Expect = 1e-30
 Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 45/175 (25%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKVI A A GI K     TVAVKMLKEG + +E   L++E++++  IG H+N++NLLG
Sbjct: 19  AFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLG 78

Query: 138 VCTQ-DGPLYVIVEFAPHGNLRDFLRKHRPS-SGYESP---------------------- 173
            CT+  GPL VIVE+   GNL ++LR  R   S Y +                       
Sbjct: 79  ACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSS 138

Query: 174 LGSAYTNGNV---------------------LTEKDLISFAYQVANGMHYLQSRK 207
             S+ ++G +                     LT +DLIS+++QVA GM +L SRK
Sbjct: 139 SQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRK 193

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score =  110 bits (275), Expect = 2e-28
 Identities = 69/176 (39%), Positives = 94/176 (53%), Gaps = 46/176 (26%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A GI K+    TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 19  AFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLG 78

Query: 138 VCTQ-DGPLYVIVEFAPHGNLRDFLRKHRPS----------------------------- 167
            CT+ +GPL VIVEF  +GNL +FLR  R                               
Sbjct: 79  ACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIE 138

Query: 168 SGYESPLGSAY---TNGNV-------------LTEKDLISFAYQVANGMHYLQSRK 207
           +G  S L S +   T+G+              LT +DLI +++QVA GM +L SRK
Sbjct: 139 AGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRK 194

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score =  109 bits (273), Expect = 4e-28
 Identities = 67/181 (37%), Positives = 88/181 (48%), Gaps = 51/181 (28%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 19  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 78

Query: 138 VCTQ-DGPLYVIVEFAPHGNLRDFLRKHR------------------------------- 165
            CT+  GPL VIVEF   GNL ++LR  R                               
Sbjct: 79  ACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRL 138

Query: 166 ---------PSSGY----------ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
                     SSG+          E           VLT +DLI +++QVA GM +L SR
Sbjct: 139 DSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR 198

Query: 207 K 207
           K
Sbjct: 199 K 199

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score =  107 bits (267), Expect = 1e-27
 Identities = 57/132 (43%), Positives = 76/132 (57%), Gaps = 10/132 (7%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+VI A    I K G+    A+KMLKE  S+ +  D   E+E++  +G H NIINLLG 
Sbjct: 15  FGQVIRAM---IKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGA 71

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHR---PSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           C   G LY+ +E+AP+GNL DFLRK R       +    G+A T    LT + L+ FA  
Sbjct: 72  CENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTAST----LTSQQLLQFASD 127

Query: 196 VANGMHYLQSRK 207
           VA GM YL  ++
Sbjct: 128 VATGMQYLSEKQ 139

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score =  102 bits (254), Expect = 7e-26
 Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 10/132 (7%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V+ A    I K G+    A+K +KE  S  +  D   E+E++  +G H NIINLLG 
Sbjct: 8   FGQVLKAR---IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 64

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHR---PSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           C   G LY+ +E+APHGNL DFLRK R       +     +A T    L+ + L+ FA  
Sbjct: 65  CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST----LSSQQLLHFAAD 120

Query: 196 VANGMHYLQSRK 207
           VA GM YL  ++
Sbjct: 121 VARGMDYLSQKQ 132

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score =  103 bits (257), Expect = 1e-25
 Identities = 61/187 (32%), Positives = 84/187 (44%), Gaps = 58/187 (31%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A G+ K     TVAVKMLK      E   L+SE++++  +G HINI+NLLG
Sbjct: 47  AFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLG 106

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHR-------------------------------- 165
            CT  GP  VI E+  +G+L +FLR+ R                                
Sbjct: 107 ACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLN 166

Query: 166 ------PSSGYESPL---------GSAYTNGNVLTE-----------KDLISFAYQVANG 199
                 P   Y  P            +Y + +V +E           +DL+SF+YQVA G
Sbjct: 167 EYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKG 226

Query: 200 MHYLQSR 206
           M +L S+
Sbjct: 227 MSFLASK 233

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score =  101 bits (254), Expect = 4e-25
 Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 55/183 (30%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLK-EGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           AFGKV+ A A G+ K+  +  VAVKMLK   H+D E   L+SE++++  +GQH NI+NLL
Sbjct: 50  AFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTD-EREALMSELKILSHLGQHKNIVNLL 108

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKH-------------------------------R 165
           G CT  GP+ VI E+  +G+L +FLRK                                R
Sbjct: 109 GACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIR 168

Query: 166 PSSGYES----------PLGSAYTNGNVLTEK------------DLISFAYQVANGMHYL 203
             SG+ S          P+ S+ +  +   ++            DL+ F+ QVA GM +L
Sbjct: 169 SDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFL 228

Query: 204 QSR 206
            S+
Sbjct: 229 ASK 231

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 98.7 bits (246), Expect = 1e-24
 Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 11/143 (7%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV   E   +  +     VAVK LKE  S+    D   E E++    QH NI+   G
Sbjct: 17  AFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF-QHENIVKFYG 75

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCT+  P  ++ E+  HG+L  FLR H P + +     S       LT   L+  A Q+A
Sbjct: 76  VCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGE---LTLSQLLQIAVQIA 132

Query: 198 NGMHYLQSRKVGNDAVRFIGFDL 220
           +GM YL S+        F+  DL
Sbjct: 133 SGMVYLASQ-------HFVHRDL 148

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 98.7 bits (246), Expect = 1e-24
 Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 77  CAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
            AFGKV   E  G  ++   T+VA+K LKE        +   E E+M  + QH NI+ LL
Sbjct: 16  GAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-QHPNIVCLL 74

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           GVCT++ P  ++ E+  HG+L +FL ++ P S   +  G   T  + L   D +  A Q+
Sbjct: 75  GVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDE-TVKSSLDCSDFLHIAIQI 133

Query: 197 ANGMHYLQSRKV 208
           A GM YL S   
Sbjct: 134 AAGMEYLSSHHF 145

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 97.8 bits (243), Expect = 5e-24
 Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 4/129 (3%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V+ A    I K G+    A+K +KE  S  +  D   E+E++  +G H NIINLLG 
Sbjct: 20  FGQVLKAR---IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 76

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
           C   G LY+ +E+APHGNL DFLRK R     +     A +  + L+ + L+ FA  VA 
Sbjct: 77  CEHRGYLYLAIEYAPHGNLLDFLRKSRVLET-DPAFAIANSTASTLSSQQLLHFAADVAR 135

Query: 199 GMHYLQSRK 207
           GM YL  ++
Sbjct: 136 GMDYLSQKQ 144

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 93.2 bits (232), Expect = 1e-22
 Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 8/130 (6%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 18  SFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCH-HVVRLLG 76

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V +   P  V++E    G+L+ +LR  RP +     LG         T +  I  A ++A
Sbjct: 77  VVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLG-------PPTLQKFIQMAAEIA 129

Query: 198 NGMHYLQSRK 207
           +GM YL ++K
Sbjct: 130 DGMAYLAAKK 139

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 90.7 bits (225), Expect = 1e-21
 Identities = 53/147 (36%), Positives = 73/147 (49%), Gaps = 8/147 (5%)

Query: 68  NSQEYVKI--KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKM 125
           N+ EYV+   + AFG+V  A A G+L     T VAVKMLKE  S     D   E  +M  
Sbjct: 5   NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 64

Query: 126 IGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRP----SSGYESPLGSAYTNG 181
              H NI+ LLGVC    P+ ++ E+  +G+L +FLR   P    S  + +         
Sbjct: 65  F-DHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLN 123

Query: 182 NV-LTEKDLISFAYQVANGMHYLQSRK 207
            + L+  + +  A QVA GM YL  RK
Sbjct: 124 PLPLSCTEQLCIAKQVAAGMAYLSERK 150

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 87.8 bits (217), Expect = 6e-20
 Identities = 39/90 (43%), Positives = 61/90 (67%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+   A G+ +   +  VAVKMLK     +E   L+SE+++M  +G H+NI+NLLG
Sbjct: 49  AFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLG 108

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPS 167
            CT+ GP+Y+I E+  +G+L ++L K+R +
Sbjct: 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDN 138

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 86.6 bits (214), Expect = 1e-19
 Identities = 38/88 (43%), Positives = 60/88 (68%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V+ A A+G+        VAVKMLK     +E   L+SE+++M  +G H+NI+NLLG
Sbjct: 49  AFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLG 108

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHR 165
            CT+ GP+Y+I E+  +G+L D+L +++
Sbjct: 109 ACTKGGPIYIITEYCRYGDLVDYLHRNK 136

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 84.7 bits (210), Expect = 2e-19
 Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 18/140 (12%)

Query: 79  FGKVICAEANGILK-----------QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG 127
           FG+V   EA+G+                   VAVK+L+   SD    D + E++++  + 
Sbjct: 18  FGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL- 76

Query: 128 QHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEK 187
              NI  LLGVCT D PL +I+E+  +G+L  FL+KH       +       N   L+  
Sbjct: 77  SDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKH------VAETSGLACNSKSLSFS 130

Query: 188 DLISFAYQVANGMHYLQSRK 207
            L+  A Q+A+GM YL+S  
Sbjct: 131 TLLYMATQIASGMRYLESLN 150

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 83.5 bits (207), Expect = 4e-19
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 24/130 (18%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG  K      VAVK LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 19  FGEVWMGTWNGTTK------VAVKTLKPGTMSPE--AFLQEAQIMKKL-RHDKLVQLYAV 69

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
           C+++ P+Y++ E+   G+L DFL+         S  G        L    L+  A Q+A 
Sbjct: 70  CSEEEPIYIVTEYMSKGSLLDFLK---------SGEGKK------LRLPQLVDMAAQIAE 114

Query: 199 GMHYLQSRKV 208
           GM YL+SR  
Sbjct: 115 GMAYLESRNY 124

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 83.3 bits (207), Expect = 4e-19
 Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 23/131 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FGKV  A      K      VA+K++K+     +   ++ E++++K + +H NI+ L  
Sbjct: 11  SFGKVYLARDKKTGKL-----VAIKVIKKKKIKKDRERILREIKILKKL-KHPNIVRLYD 64

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V   +  LY+++E+   G+L D L+K                    L+E +   +  Q+ 
Sbjct: 65  VFEDEDKLYLVMEYCEGGDLFDLLKKRGR-----------------LSEDEARFYLRQIL 107

Query: 198 NGMHYLQSRKV 208
           + + YL S+ +
Sbjct: 108 SALEYLHSKGI 118

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 83.2 bits (206), Expect = 7e-19
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 19/112 (16%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP--LYVIVEFAPHGN 156
           VAVK L     +    D   E+E+++ +  H NI+   GVC + G   L +I+E+ P G+
Sbjct: 36  VAVKSLNHSGEEQHRSDFEREIEILRTL-DHENIVKYKGVCEKPGGRSLRLIMEYLPSGS 94

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           LRD+L++HR                  +  K L+ F+ Q+  GM YL S++ 
Sbjct: 95  LRDYLQRHRDQ----------------INLKRLLLFSSQICKGMDYLGSQRY 130

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 83.1 bits (205), Expect = 9e-19
 Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 14/133 (10%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  AE + +L +     VAVK LKE    A   D   E E++ ++ QH +I+   G
Sbjct: 17  AFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQREAELLTVL-QHQHIVRFYG 74

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSS-----GYESPLGSAYTNGNVLTEKDLISF 192
           VCT+  PL ++ E+  HG+L  FLR H P +     G +   G        LT   +++ 
Sbjct: 75  VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQ-------LTLGQMLAI 127

Query: 193 AYQVANGMHYLQS 205
           A Q+A+GM YL S
Sbjct: 128 ASQIASGMVYLAS 140

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 81.4 bits (201), Expect = 2e-18
 Identities = 50/144 (34%), Positives = 67/144 (46%), Gaps = 19/144 (13%)

Query: 78  AFGKVICAEANGILKQGI-ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           AFG+V    A  IL  G     VAVK L++G +D E  + + E  +M     H NI+ LL
Sbjct: 7   AFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-NHPNIVKLL 65

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           GVC  + P Y+I+E    G+L  +LR  R       PL         LT K+L+     V
Sbjct: 66  GVCLLNEPQYIIMELMEGGDLLSYLRDARVERFG-PPL---------LTLKELLDICLDV 115

Query: 197 ANGMHYLQSRKVGNDAVRFIGFDL 220
           A G  YL+        + FI  DL
Sbjct: 116 AKGCVYLEQ-------MHFIHRDL 132

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 80.4 bits (199), Expect = 2e-18
 Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 22/131 (16%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V  A      K+     VA+K++K+  S + + +L+ E+E++K +  H NI+ L G
Sbjct: 5   GFGTVYLARDKKTGKK-----VAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYG 58

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V   +  LY+++E+   G+L+D L++                N   L+E +++    Q+ 
Sbjct: 59  VFEDENHLYLVMEYCEGGSLKDLLKE----------------NEGKLSEDEILRILLQIL 102

Query: 198 NGMHYLQSRKV 208
            G+ YL S  +
Sbjct: 103 EGLEYLHSNGI 113

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 80.7 bits (199), Expect = 4e-18
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%)

Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE     E+ + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 33  TVAVKTLKE--DTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 89

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 90  LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 123

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 77.1 bits (190), Expect = 1e-16
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 18/110 (16%)

Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK LK G  D +  D ++E ++MK + +H  +I L  VCT + P+Y++ E   +G+
Sbjct: 31  TPVAVKTLKPGTMDPK--DFLAEAQIMKKL-RHPKLIQLYAVCTLEEPIYIVTELMKYGS 87

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           L ++L+                  G  L    LI  A QVA+GM YL+++
Sbjct: 88  LLEYLQG---------------GAGRALKLPQLIDMAAQVASGMAYLEAQ 122

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 76.0 bits (187), Expect = 3e-16
 Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 21/161 (13%)

Query: 68  NSQEYVKI-KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMI 126
           N QE   + +  FG+V  A+A GI ++G  T V VK L++   +    +   E++M + +
Sbjct: 6   NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65

Query: 127 GQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTE 186
             H N++ LLG+C +  P Y+I+E+   G+L+ FLR  +       P          L+ 
Sbjct: 66  -SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKP--------PPLST 116

Query: 187 KDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDL----CIL 223
           K  ++   Q+A GM +L +        RF+  DL    C++
Sbjct: 117 KQKVALCTQIALGMDHLSN-------ARFVHRDLAARNCLV 150

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 75.1 bits (185), Expect = 4e-16
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 31/147 (21%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMD-LVSEME 121
           INS+E           FG V+  +  G         VAVK LK+   D+      ++E  
Sbjct: 3   INSKELKLGATIGKGEFGDVMLGDYRG-------QKVAVKCLKD---DSTAAQAFLAEAS 52

Query: 122 MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNG 181
           +M  + +H N++ LLGV  Q  PLY++ E+   G+L D+LR    S G            
Sbjct: 53  VMTTL-RHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLR----SRGRA---------- 97

Query: 182 NVLTEKDLISFAYQVANGMHYLQSRKV 208
            V+T    + FA  V  GM YL+ +  
Sbjct: 98  -VITLAQQLGFALDVCEGMEYLEEKNF 123

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 74.7 bits (184), Expect = 6e-16
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 25/131 (19%)

Query: 79  FGKVICAEANGI--LKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FG V+     G+  +K G    VAVK LK+ H  A   + + E  +M  +  H  I+ L+
Sbjct: 8   FGSVV----KGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL-DHPCIVRLI 62

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           GVC +  PL +++E AP G L  +L+K R                  +   DL   A+QV
Sbjct: 63  GVC-KGEPLMLVMELAPLGPLLKYLKKRR-----------------EIPVSDLKELAHQV 104

Query: 197 ANGMHYLQSRK 207
           A GM YL+S+ 
Sbjct: 105 AMGMAYLESKH 115

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 74.4 bits (183), Expect = 1e-15
 Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 22/150 (14%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V      G     +   VAVK L E  S+ +  D + E  +M     H NI+ L+G
Sbjct: 18  AFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF-NHQNIVRLIG 76

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  +  P ++++E    G+L+ FLR++RP     S           LT KDL+  A  VA
Sbjct: 77  VSFERLPRFILLELMAGGDLKSFLRENRPRPERPSS----------LTMKDLLFCARDVA 126

Query: 198 NGMHYLQSRKVGNDAVRFIGFDL----CIL 223
            G  YL+          FI  D+    C+L
Sbjct: 127 KGCKYLEEN-------HFIHRDIAARNCLL 149

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 74.2 bits (182), Expect = 1e-15
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 8/130 (6%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A  I+K    T VAVK + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 18  SFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLG 76

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V ++  P  V++E   HG+L+ +LR  RP +  E+  G         T +++I  A ++A
Sbjct: 77  VVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPPP-----TLQEMIQMAAEIA 129

Query: 198 NGMHYLQSRK 207
           +GM YL ++K
Sbjct: 130 DGMAYLNAKK 139

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 72.5 bits (178), Expect = 4e-15
 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 19/107 (17%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+KM++EG    +  D + E ++M  +  H N++ L GVCT+  P++++ E+  +G L 
Sbjct: 31  VAIKMIREGAMSED--DFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVTEYMANGCLL 87

Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
           ++LR+ +                  L  + L+     V   M YL+S
Sbjct: 88  NYLRERK----------------GKLGTEWLLDMCSDVCEAMEYLES 118

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 72.8 bits (178), Expect = 4e-15
 Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 6/129 (4%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  AE   +  +     VAVK LK+  SD    D   E E++  + QH +I+   G
Sbjct: 17  AFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNL-QHEHIVKFYG 74

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VC +  PL ++ E+  HG+L  FLR H P    ++ L +       LT+  ++  A Q+A
Sbjct: 75  VCVEGDPLIMVFEYMKHGDLNKFLRAHGP----DAVLMAEGNRPAELTQSQMLHIAQQIA 130

Query: 198 NGMHYLQSR 206
            GM YL S+
Sbjct: 131 AGMVYLASQ 139

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 71.7 bits (176), Expect = 7e-15
 Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 23/131 (17%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           K  FG V      G+LK    T VAVK  +           + E E++K    H NI+ L
Sbjct: 5   KGNFGDVY----KGVLKGN--TEVAVKTCRSTLPPDLKRKFLQEAEILKQY-DHPNIVKL 57

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           +GVC Q  P+Y+++E  P G+L  FLRK                  N LT K L+  +  
Sbjct: 58  IGVCVQKQPIYIVMELVPGGSLLTFLRK----------------KKNRLTVKKLLQMSLD 101

Query: 196 VANGMHYLQSR 206
            A GM YL+S+
Sbjct: 102 AAAGMEYLESK 112

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 70.5 bits (173), Expect = 2e-14
 Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 17/110 (15%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K+LK      +  D   E++ +K + +H ++I+L  VC+   P+Y+I E    G+L 
Sbjct: 33  VAIKILKS-DDLLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYIITELMEKGSLL 90

Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            FLR         SP       G VL    LI  A QVA GM YL+ +  
Sbjct: 91  AFLR---------SP------EGQVLPVASLIDMACQVAEGMAYLEEQNS 125

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 70.7 bits (173), Expect = 2e-14
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 22/140 (15%)

Query: 79  FGKVICAEANGILK-------------QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKM 125
           FG+V   EA G+ K             Q ++  VAVKML+E  +     D + E+++M  
Sbjct: 18  FGEVHLCEAEGMEKFMDKDFSLDVSGNQPVL--VAVKMLREDANKNARNDFLKEIKIMSR 75

Query: 126 IGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLT 185
           + +  NII LL VC    PL +I E+  +G+L  FL +H P    +     A  +   ++
Sbjct: 76  L-KDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEP----QEAAEKA--DVVTIS 128

Query: 186 EKDLISFAYQVANGMHYLQS 205
              LI  A Q+A+GM YL S
Sbjct: 129 YSTLIFMATQIASGMKYLSS 148

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 70.0 bits (171), Expect = 3e-14
 Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 23/131 (17%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           K  FG+V      G LK    T VAVK  KE       +  +SE  ++K    H NI+ L
Sbjct: 5   KGNFGEVF----KGTLKDK--TPVAVKTCKEDLPQELKIKFLSEARILKQY-DHPNIVKL 57

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           +GVCTQ  P+Y+++E  P G+   FLRK +                  L  K L+ FA  
Sbjct: 58  IGVCTQRQPIYIVMELVPGGDFLSFLRKKKDE----------------LKTKQLVKFALD 101

Query: 196 VANGMHYLQSR 206
            A GM YL+S+
Sbjct: 102 AAAGMAYLESK 112

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 24/132 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           +FG V  A+      +G    VAVK+L K      +      E+ +++ +  H NI+ L+
Sbjct: 11  SFGTVYKAK-----HKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRL-SHPNIVRLI 64

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
                   LY+++E+   G+L D+L +  P                 L+E +    A Q+
Sbjct: 65  DAFEDKDHLYLVMEYCEGGDLFDYLSRGGP-----------------LSEDEAKKIALQI 107

Query: 197 ANGMHYLQSRKV 208
             G+ YL S  +
Sbjct: 108 LRGLEYLHSNGI 119

Length = 260

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 23/127 (18%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ--HINIINLL 136
           FG+V         K+ I   VA+K LK G SD + +D ++E  +M   GQ  H NII L 
Sbjct: 17  FGEVCRGRLKLPGKKEI--DVAIKTLKAGSSDKQRLDFLTEASIM---GQFDHPNIIRLE 71

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           GV T+  P+ +I E+  +G+L  FLR++    G  +                L+     +
Sbjct: 72  GVVTKSRPVMIITEYMENGSLDKFLREND---GKFTVG-------------QLVGMLRGI 115

Query: 197 ANGMHYL 203
           A+GM YL
Sbjct: 116 ASGMKYL 122

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 47/147 (31%), Positives = 64/147 (43%), Gaps = 34/147 (23%)

Query: 89  GILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ 141
           G++++G  +T       VAVK LK       M D + E  +M  +  H N+I L GV   
Sbjct: 9   GVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-DHENLIRLYGVVLT 67

Query: 142 DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMH 201
             PL ++ E AP G+L D LRK                         L  +A Q+ANGM 
Sbjct: 68  H-PLMMVTELAPLGSLLDRLRKDALGH---------------FLISTLCDYAVQIANGMR 111

Query: 202 YLQSRKVGNDAVRFIGFDLC---ILVF 225
           YL+S+       RFI  DL    IL+ 
Sbjct: 112 YLESK-------RFIHRDLAARNILLA 131

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 67.1 bits (164), Expect = 3e-13
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 22/140 (15%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG V   +   +  +     VAVK  K   S +     + E  +M+    H +I+ L+GV
Sbjct: 19  FGDV--YQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-DHPHIVKLIGV 75

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            T + P+++++E AP G LR +L+ ++ S                L    LI ++YQ++ 
Sbjct: 76  IT-ENPVWIVMELAPLGELRSYLQVNKYS----------------LDLASLILYSYQLST 118

Query: 199 GMHYLQSRK-VGND-AVRFI 216
            + YL+S++ V  D A R +
Sbjct: 119 ALAYLESKRFVHRDIAARNV 138

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 67.0 bits (163), Expect = 4e-13
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 18  SFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 76

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V +Q  P  VI+E    G+L+ +LR  RP                  + K +I  A ++A
Sbjct: 77  VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPP-------SLKKMIQMAGEIA 129

Query: 198 NGMHYLQSRK 207
           +GM YL + K
Sbjct: 130 DGMAYLNANK 139

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 67.3 bits (164), Expect = 4e-13
 Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 15/136 (11%)

Query: 79  FGKVICAEANGILK---------QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH 129
           FG+V   EA G+ +          G    VAVKML+   +     D + E+++M  + ++
Sbjct: 18  FGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-KN 76

Query: 130 INIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL 189
            NII LLGVC  D PL +I E+  +G+L  FL +    S +     +   N   ++  +L
Sbjct: 77  PNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTF-----THANNIPSVSIANL 131

Query: 190 ISFAYQVANGMHYLQS 205
           +  A Q+A+GM YL S
Sbjct: 132 LYMAVQIASGMKYLAS 147

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 65.0 bits (158), Expect = 2e-12
 Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 3/129 (2%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  AE   +        VAVK LK+    A   D   E E++  + QH +I+   G
Sbjct: 17  AFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK-DFQREAELLTNL-QHEHIVKFYG 74

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VC    PL ++ E+  HG+L  FLR H P +            G  L    ++  A Q+A
Sbjct: 75  VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE-LGLSQMLHIASQIA 133

Query: 198 NGMHYLQSR 206
           +GM YL S+
Sbjct: 134 SGMVYLASQ 142

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 64.5 bits (157), Expect = 3e-12
 Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 36/158 (22%)

Query: 79  FGKVICAEANGILKQ--GIITTVAVKMLK-EGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           FG V+     G L Q  G    VAVK +K + H+ +E+ + +SE   MK    H N++ L
Sbjct: 12  FGSVM----EGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-DHPNVMKL 66

Query: 136 LGVCTQDGPL------YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL 189
           +GVC +   L       VI+ F  HG+L  FL   R     E            L  + L
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEK-----------LPLQTL 115

Query: 190 ISFAYQVANGMHYLQSRKVGNDAVRFIGFDL----CIL 223
           + F   +A GM YL +R        FI  DL    C+L
Sbjct: 116 LKFMVDIALGMEYLSNR-------NFIHRDLAARNCML 146

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 32/132 (24%)

Query: 99  VAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIVEFAPHG 155
           VAVK L+  HS AE + D   E+E++K + QH NI+   GVC   G   L +++E+ P+G
Sbjct: 36  VAVKKLQ--HSTAEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLRLVMEYLPYG 92

Query: 156 NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRF 215
           +LRD+L+KHR                  L  + L+ +A Q+  GM YL S+       R+
Sbjct: 93  SLRDYLQKHRER----------------LDHRKLLLYASQICKGMEYLGSK-------RY 129

Query: 216 IGFDLC---ILV 224
           +  DL    ILV
Sbjct: 130 VHRDLATRNILV 141

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 63.1 bits (153), Expect = 1e-11
 Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 2/130 (1%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FGKV      G         VA+K LK+  ++  + +      MM+   QH NI+ LLGV
Sbjct: 18  FGKVYKGHLFGTAPGEQTQAVAIKTLKD-KAEGPLREEFKHEAMMRSRLQHPNIVCLLGV 76

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            T++ PL +I  +  H +L +FL    P S   S      T  + L   D +    Q+A 
Sbjct: 77  VTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGST-DDDKTVKSTLEPADFVHIVTQIAA 135

Query: 199 GMHYLQSRKV 208
           GM +L S  V
Sbjct: 136 GMEFLSSHHV 145

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 62.6 bits (152), Expect = 2e-11
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 3/117 (2%)

Query: 91  LKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE 150
           +++G    VAVK+L+   +     D + E++++  + +  NII LLGVC  + PL +I E
Sbjct: 41  VRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL-KDPNIIRLLGVCVDEDPLCMITE 99

Query: 151 FAPHGNLRDFLRKHRPSSGYE--SPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
           +  +G+L  FL  H      E  +           ++   L+  A Q+A+GM YL S
Sbjct: 100 YMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS 156

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 62.3 bits (151), Expect = 2e-11
 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 21/113 (18%)

Query: 97  TTVAVKMLKEGHSDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHG 155
             VA+K ++EG    E  D + E + MMK+   H  ++ L GVCT+  P+ ++ EF  HG
Sbjct: 29  RKVAIKTIREGAMSEE--DFIEEAQVMMKL--SHPKLVQLYGVCTERSPICLVFEFMEHG 84

Query: 156 NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            L D+LR  R                   +++ L+     V  GM YL+S  V
Sbjct: 85  CLSDYLRAQRGK----------------FSQETLLGMCLDVCEGMAYLESSNV 121

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 61.9 bits (150), Expect = 3e-11
 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 19/111 (17%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIVEFAPHGN 156
           VAVK LK       + DL  E+E+++ +  H NI+   G+CT+DG   + +I+EF P G+
Sbjct: 36  VAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIMEFLPSGS 94

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           L+++L +                N N +  K  + +A Q+  GM YL SR+
Sbjct: 95  LKEYLPR----------------NKNKINLKQQLKYAVQICKGMDYLGSRQ 129

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 61.0 bits (148), Expect = 4e-11
 Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 21/110 (19%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           VA+KM+KEG    +  + + E + MMK+   H  ++ L GVCT+  P+Y++ E+  +G L
Sbjct: 31  VAIKMIKEGSMSED--EFIEEAKVMMKL--SHEKLVQLYGVCTKQRPIYIVTEYMSNGCL 86

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
            ++LR+H                        L+     V  GM YL+S++
Sbjct: 87  LNYLREHGKR----------------FQPSQLLEMCKDVCEGMAYLESKQ 120

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 22/117 (18%)

Query: 94  GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVC-TQDGPLYVIVEFA 152
           G     AVK L       E+   + E  +MK    H N+++LLG+C   +G   V++ + 
Sbjct: 21  GQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLPYM 79

Query: 153 PHGNLRDFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
            HG+LR+F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 80  KHGDLRNFIRSETHNP------------------TVKDLIGFGLQVAKGMEYLASKK 118

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 13/112 (11%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIG-QHINIINLLGVCTQD-GPLYVIVEFAPHGN 156
           V VK +K+  S+ ++  L+ E     + G  H NI+ +L VC +D  P +V+  +   GN
Sbjct: 38  VFVKTVKDHASEIQVTLLLQES--CLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGN 95

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           L+ FL++ R              N   L+ + L+  A Q+A GM YL  R V
Sbjct: 96  LKLFLQQCRLGEA---------NNPQALSTQQLVHMAIQIACGMSYLHKRGV 138

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 59.9 bits (145), Expect = 1e-10
 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 5/68 (7%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ--HINIINLLGVCTQDGPLYVIVEFAPHGN 156
           VA+K LK G+++ +  D +SE  +M   GQ  H NII+L GV T+  P+ ++ E+  +G+
Sbjct: 35  VAIKTLKAGYTEKQRRDFLSEASIM---GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGS 91

Query: 157 LRDFLRKH 164
           L  FLRKH
Sbjct: 92  LDAFLRKH 99

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 59.1 bits (143), Expect = 2e-10
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 21/107 (19%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           VA+K + EG    E  D + E + MMK+   H  ++ L GVCTQ  PLY++ EF  +G L
Sbjct: 31  VAIKAINEGAMSEE--DFIEEAKVMMKL--SHPKLVQLYGVCTQQKPLYIVTEFMENGCL 86

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQ 204
            ++LR+ +                  L++  L+S    V  GM YL+
Sbjct: 87  LNYLRQRQ----------------GKLSKDMLLSMCQDVCEGMEYLE 117

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 58.7 bits (142), Expect = 3e-10
 Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FGKV+  EA+  +       V VK L+   +  E +  + E++  + +  H N++  LG 
Sbjct: 8   FGKVLLGEAHRGMS---KARVVVKELRASATPDEQLLFLQEVQPYREL-NHPNVLQCLGQ 63

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHR 165
           C +  P  +++EF P G+L+++LR +R
Sbjct: 64  CIESIPYLLVLEFCPLGDLKNYLRSNR 90

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 58.9 bits (142), Expect = 3e-10
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 76  KCAFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINII 133
           +CAFGK+       +   G+     VA+K LK+ ++  +  +   E  +M  +  H NI+
Sbjct: 15  ECAFGKIYKGH---LYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-HHPNIV 70

Query: 134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
            LLGV TQ+ P+ ++ E+   G+L +FL    P S          T  + L   D +  A
Sbjct: 71  CLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIA 130

Query: 194 YQVANGMHYLQS 205
            Q+A GM YL S
Sbjct: 131 IQIAAGMEYLSS 142

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 18/110 (16%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K+L+E  S     +++ E  +M  +  H +++ LLG+C     + +I +  P G L 
Sbjct: 39  VAIKVLREETSPKANKEILDEAYVMASVD-HPHVVRLLGICLSS-QVQLITQLMPLGCLL 96

Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R H+ +      +GS          + L+++  Q+A GM YL+ +++
Sbjct: 97  DYVRNHKDN------IGS----------QYLLNWCVQIAKGMSYLEEKRL 130

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 19/110 (17%)

Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VA+K LK+G    E    ++E  +MK + QH  ++ L  V TQ+ P+Y+I E+  +G+
Sbjct: 31  TKVAIKSLKQGSMSPEA--FLAEANLMKQL-QHPRLVRLYAVVTQE-PIYIITEYMENGS 86

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           L DFL+                  G  LT   LI  A Q+A GM +++ +
Sbjct: 87  LVDFLKT---------------PEGIKLTINKLIDMAAQIAEGMAFIERK 121

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 57.7 bits (139), Expect = 6e-10
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 18/110 (16%)

Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK LK G    +    + E  +MK + QH  ++ L  V T++ P+Y+I E+   G+
Sbjct: 31  TKVAVKTLKPGTMSVQA--FLEEANLMKTL-QHDKLVRLYAVVTKEEPIYIITEYMAKGS 87

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           L DFL+                  G VL  K LI F+ Q+A GM Y++ +
Sbjct: 88  LLDFLKSDE--------------GGKVLLPK-LIDFSAQIAEGMAYIERK 122

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 57.2 bits (138), Expect = 1e-09
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
             VA+K LK G+++ +  D +SE  +M     H NII+L GV T+  P+ +I EF  +G 
Sbjct: 33  IFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVMIITEFMENGA 91

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYL 203
           L  FLR+                N    T   L+     +A GM YL
Sbjct: 92  LDSFLRQ----------------NDGQFTVIQLVGMLRGIAAGMKYL 122

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 30/145 (20%)

Query: 71  EYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMD-LVSEMEMMKM 125
           E+ + +     +FG V  A        G    +AVK ++      E ++ L  E+ ++  
Sbjct: 1   EWTRGELLGRGSFGSVYLAL---DKDTG--ELMAVKSVELSGDSEEELEALEREIRILSS 55

Query: 126 IGQHINIINLLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           + QH NI+   G    +    L + +E+   G+L   L+K                    
Sbjct: 56  L-QHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGK----------------- 97

Query: 184 LTEKDLISFAYQVANGMHYLQSRKV 208
           L E  +  +  Q+  G+ YL S  +
Sbjct: 98  LPEPVIRKYTRQILEGLAYLHSNGI 122

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 56.6 bits (136), Expect = 1e-09
 Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 17/110 (15%)

Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK  +E          + E  ++K    H NI+ L+GVCTQ  P+Y+++E    G+
Sbjct: 21  TPVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGGD 79

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
              FLR                T G  L  K+LI      A GM YL+S+
Sbjct: 80  FLTFLR----------------TEGPRLKVKELIQMVENAAAGMEYLESK 113

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 26/133 (19%)

Query: 79  FGKVI--CAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FGKV   C +       G    VAVK LK             E+ ++K +  H NI+   
Sbjct: 17  FGKVSLYCYDPA---NDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL-YHENIVKYK 72

Query: 137 GVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           G C++ G   L +I+E+ P G+LRD+L KH+                  L    L+ FA 
Sbjct: 73  GCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK------------------LNLAQLLLFAQ 114

Query: 195 QVANGMHYLQSRK 207
           Q+  GM YL S+ 
Sbjct: 115 QICEGMAYLHSQH 127

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 19/110 (17%)

Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK +K G    E    ++E  +MK + QH  ++ L  V T++ P+Y+I EF   G+
Sbjct: 31  TKVAVKTMKPGSMSVEA--FLAEANVMKTL-QHDKLVKLHAVVTKE-PIYIITEFMAKGS 86

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           L DFL+                  G+      LI F+ Q+A GM +++ R
Sbjct: 87  LLDFLKSDE---------------GSKQPLPKLIDFSAQIAEGMAFIEQR 121

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 55.8 bits (134), Expect = 3e-09
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 27/131 (20%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           K  FG V+  +  G         VAVK +K   +DA     ++E  +M  + +H N++ L
Sbjct: 16  KGEFGDVMLGDYRG-------NKVAVKCIK---NDATAQAFLAEASVMTQL-RHSNLVQL 64

Query: 136 LGVCTQD-GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           LGV  ++ G LY++ E+   G+L D+LR    S               VL    L+ F+ 
Sbjct: 65  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS---------------VLGGDCLLKFSL 109

Query: 195 QVANGMHYLQS 205
            V   M YL++
Sbjct: 110 DVCEAMEYLEA 120

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 55.0 bits (132), Expect = 5e-09
 Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 29/131 (22%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG V+  E  G         VAVK +K    D      + E  +M  +  H N++ LLGV
Sbjct: 19  FGAVLQGEYTG-------QKVAVKNIK---CDVTAQAFLEETAVMTKL-HHKNLVRLLGV 67

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTE-KDLISFAYQVA 197
              +G LY+++E    GNL +FLR                T G  L     L+ F+  VA
Sbjct: 68  ILHNG-LYIVMELMSKGNLVNFLR----------------TRGRALVSVIQLLQFSLDVA 110

Query: 198 NGMHYLQSRKV 208
            GM YL+S+K+
Sbjct: 111 EGMEYLESKKL 121

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 54.9 bits (132), Expect = 5e-09
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 79  FGKVICAEANGILKQGIITT-VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           FGKVI  E N     G     V VK L+   S  E M  + E +  + + QH N++  LG
Sbjct: 8   FGKVILGEVN----SGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-QHSNLLQCLG 62

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHR 165
            CT+  P  +++EF P G+L+ +LR  R
Sbjct: 63  QCTEVTPYLLVMEFCPLGDLKGYLRSCR 90

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 54.5 bits (131), Expect = 9e-09
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 21/107 (19%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ--HINIINLLGVCTQDGPLYVIVEFAPHGN 156
           VA+  L+ G SD +    ++E   +   GQ  H NI+ L GV T+   + ++ E+  +G 
Sbjct: 36  VAIHTLRAGCSDKQRRGFLAEALTL---GQFDHSNIVRLEGVITRGNTMMIVTEYMSNGA 92

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYL 203
           L  FLRKH                   L    L+     +A+GM YL
Sbjct: 93  LDSFLRKHEGQ----------------LVAGQLMGMLPGLASGMKYL 123

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 54.6 bits (131), Expect = 9e-09
 Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 24/130 (18%)

Query: 81  KVICAEANGILKQGII-------TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINII 133
           KVI A   G + +GI+         VA+K LK G+++ +  D +SE  +M     H NII
Sbjct: 11  KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHH-NII 69

Query: 134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
            L GV T+  P  +I E+  +G L  +LR H    G  S                L+   
Sbjct: 70  RLEGVVTKFKPAMIITEYMENGALDKYLRDH---DGEFSSY-------------QLVGML 113

Query: 194 YQVANGMHYL 203
             +A GM YL
Sbjct: 114 RGIAAGMKYL 123

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 54.0 bits (131), Expect = 1e-08
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 19/112 (16%)

Query: 98  TVAVKMLKEGHSDAEM-MDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
            VA+K ++  + +  +    + E+ ++K + +H NI+ LL V   +  LY++ E+    +
Sbjct: 26  IVALKKIRLDNEEEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVFEYCDM-D 83

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           L+ +L K                    L+   + S  YQ+  G+ Y  S ++
Sbjct: 84  LKKYLDKRPG----------------PLSPNLIKSIMYQLLRGLAYCHSHRI 119

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 52.0 bits (124), Expect = 6e-08
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 25/126 (19%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 19  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 69

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 70  VSEE-PIYIVTEYMSKGSLLDFLKGE---------------MGKYLRLPQLVDMAAQIAS 113

Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 114 GMAYVE 119

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 52.0 bits (124), Expect = 7e-08
 Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 37/158 (23%)

Query: 79  FGKVICAEANGILKQG-IITTVAVKMLKEG-HSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FG V+     G L Q   I  VAVK +K    + +EM D +SE   MK    H N++ L+
Sbjct: 12  FGSVM----EGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-DHPNVMRLI 66

Query: 137 GVCTQD-------GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL 189
           GVC Q         P+ VI+ F  HG+L  FL   R     + P          L  + L
Sbjct: 67  GVCLQTVESEGYPSPV-VILPFMKHGDLHSFLLYSRLG---DCPQ--------YLPTQML 114

Query: 190 ISFAYQVANGMHYLQSRKVGNDAVRFIGFDL----CIL 223
           + F   +A+GM YL S+        FI  DL    C+L
Sbjct: 115 VKFMTDIASGMEYLSSK-------SFIHRDLAARNCML 145

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 51.5 bits (124), Expect = 8e-08
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 19/112 (16%)

Query: 98  TVAVK-MLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
            VA+K +  E   +  +  ++ E++++K + +H NI+  +G       LY+I+E+A +G+
Sbjct: 27  FVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIILEYAENGS 85

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           LR  ++K  P                   E  +  + YQV  G+ YL  + V
Sbjct: 86  LRQIIKKFGP-----------------FPESLVAVYVYQVLQGLAYLHEQGV 120

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 51.6 bits (123), Expect = 9e-08
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 25/126 (19%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 19  FGEVWMGTWNGT------TKVAIKTLKPGTMMPEA--FLQEAQIMKKL-RHDKLVPLYAV 69

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ EF   G+L DFL++                +G  L    L+  A Q+A+
Sbjct: 70  VSEE-PIYIVTEFMGKGSLLDFLKE---------------GDGKYLKLPQLVDMAAQIAD 113

Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 114 GMAYIE 119

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 51.2 bits (122), Expect = 1e-07
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 25/126 (19%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 19  FGEVWMGTWNGN------TKVAVKTLKPGTMSPE--SFLEEAQIMKKL-RHDKLVQLYAV 69

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L   +L+  A QVA 
Sbjct: 70  VSEE-PIYIVTEYMSKGSLLDFLKD---------------GEGRALKLPNLVDMAAQVAA 113

Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 114 GMAYIE 119

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 51.3 bits (121), Expect = 1e-07
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 24/133 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSD--AEMMDLVSEMEMMKMIGQHINIINL 135
           +FG+V  A             VA+K+L +       E+   + E++++  +    NI+ L
Sbjct: 12  SFGEVYLARDR--------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKL 63

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
                 +G LY+++E+   G+L D L+K                    L+E + +    Q
Sbjct: 64  YDFFQDEGSLYLVMEYVDGGSLEDLLKKIG--------------RKGPLSESEALFILAQ 109

Query: 196 VANGMHYLQSRKV 208
           + + + YL S+ +
Sbjct: 110 ILSALEYLHSKGI 122

Length = 384

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 48.5 bits (115), Expect = 1e-06
 Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 18/116 (15%)

Query: 93  QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA 152
           + +   VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  
Sbjct: 33  EKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLM 90

Query: 153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           P G L D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 91  PFGCLLDYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEERRL 130

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 48.0 bits (114), Expect = 1e-06
 Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 20/108 (18%)

Query: 98  TVAVKMLKEGHSDAEMMD-LVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           TVAVK+LK  ++D  + D L+ E  +M+ +  +  I+ ++G+C  +    +++E A  G 
Sbjct: 24  TVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIVRMIGICEAES-WMLVMELAELGP 81

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQ 204
           L  FL+K++                  +TEK++    +QV+ GM YL+
Sbjct: 82  LNKFLQKNKH-----------------VTEKNITELVHQVSMGMKYLE 112

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 29/136 (21%)

Query: 78  AFGKV-ICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVS----EMEMMKMIGQHINI 132
           AFG+V +C + +     G    +AVK +       E    V+    E++++K + QH  I
Sbjct: 14  AFGRVYLCYDVD----TG--RELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERI 66

Query: 133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
           +   G    D  L + +E+ P G+++D L+ +                   LTE     +
Sbjct: 67  VQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGA-----------------LTETVTRKY 109

Query: 193 AYQVANGMHYLQSRKV 208
             Q+  G+ YL S  +
Sbjct: 110 TRQILEGVEYLHSNMI 125

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 44/138 (31%), Positives = 61/138 (44%), Gaps = 21/138 (15%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLK-EGHSDAEMMDLVSEMEMMKMIGQHINIIN 134
           K  FG V   EA    + G    VAVKMLK +  S +++ + + E   MK    H N+I 
Sbjct: 9   KGEFGSV--REAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-DHPNVIK 65

Query: 135 LLGVCTQDGPL------YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKD 188
           L+GV  +           VI+ F  HG+L  FL   R     E P          L  + 
Sbjct: 66  LIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIG---EEPFT--------LPLQT 114

Query: 189 LISFAYQVANGMHYLQSR 206
           L+ F   +A+GM YL S+
Sbjct: 115 LVRFMIDIASGMEYLSSK 132

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 24/124 (19%)

Query: 93  QGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV-E 150
            G   +V +K+L   H D+    +  S   +M  +  H +++ L GVC +D    ++V E
Sbjct: 27  PGQEVSVVLKVLGSDHRDSLAFFETAS---LMSQL-SHKHLVKLYGVCVRDE--NIMVEE 80

Query: 151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGN 210
           +   G L  FL +                  N ++    +  A Q+A+ +HYL+ +K+ +
Sbjct: 81  YVKFGPLDVFLHR----------------EKNNVSLHWKLDVAKQLASALHYLEDKKLVH 124

Query: 211 DAVR 214
             V 
Sbjct: 125 GNVC 128

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 46.5 bits (110), Expect = 4e-06
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 20/111 (18%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP-LYVIVEFAPHGNL 157
           VA+K +++        ++   M  M  +  H  I+ LLG+C   G  L ++ + +P G+L
Sbjct: 39  VAIKTIQDRSGRQTFQEITDHMLAMGSL-DHAYIVRLLGICP--GASLQLVTQLSPLGSL 95

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            D +R+HR S                L  + L+++  Q+A GM+YL+  ++
Sbjct: 96  LDHVRQHRDS----------------LDPQRLLNWCVQIAKGMYYLEEHRM 130

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 46.1 bits (109), Expect = 5e-06
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 25/136 (18%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA---EMMDLVSEMEMMKMIGQHINI 132
           K A+G V C    G+  QG +  V    L   +  A   E   L  E++++K + +H+NI
Sbjct: 10  KGAYGTVYC----GLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNI 64

Query: 133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
           +  LG C  D  + + +EF P G++   L +  P                 L E     +
Sbjct: 65  VQYLGTCLDDNTISIFMEFVPGGSISSILNRFGP-----------------LPEPVFCKY 107

Query: 193 AYQVANGMHYLQSRKV 208
             Q+ +G+ YL +  V
Sbjct: 108 TKQILDGVAYLHNNCV 123

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 19/111 (17%)

Query: 99  VAVKMLKEGHSDAEMMDL-VSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           VA+K  KE   D ++    + E+++++ + +H NI+NL     + G LY++ E+     L
Sbjct: 29  VAIKKFKESEDDEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYLVFEYVER-TL 86

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            + L          SP G        L    + S+ +Q+   + Y  S  +
Sbjct: 87  LELLE--------ASPGG--------LPPDAVRSYIWQLLQAIAYCHSHNI 121

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 45.8 bits (108), Expect = 9e-06
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 25/122 (20%)

Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K+L+E  S     +++ E  +M  +G    +  LLG+C     + ++ +  P+G L 
Sbjct: 39  VAIKVLRENTSPKANKEILDEAYVMAGVGSPY-VCRLLGICLTS-TVQLVTQLMPYGCLL 96

Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGF 218
           D++R+++   G                 +DL+++  Q+A GM YL+        VR +  
Sbjct: 97  DYVRENKDRIG----------------SQDLLNWCVQIAKGMSYLEE-------VRLVHR 133

Query: 219 DL 220
           DL
Sbjct: 134 DL 135

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 26/136 (19%)

Query: 81  KVICAEANGILKQGIITT--------VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINI 132
           KV+ + A G + +GI           VA+K+L E       ++ + E  +M  +  H ++
Sbjct: 13  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHL 71

Query: 133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
           + LLGVC     + ++ +  PHG L D++ +H+ + G +                 L+++
Sbjct: 72  VRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQL----------------LLNW 114

Query: 193 AYQVANGMHYLQSRKV 208
             Q+A GM YL+ R++
Sbjct: 115 CVQIAKGMMYLEERRL 130

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 19/110 (17%), Positives = 45/110 (40%), Gaps = 18/110 (16%)

Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
             A+K +     +     L+ E++ ++   +   ++   G   ++G + +++E+   G+L
Sbjct: 28  IYALKKIHVDGDEEFRKQLLRELKTLR-SCESPYVVKCYGAFYKEGEISIVLEYMDGGSL 86

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
            D L+K                    + E  L   A Q+  G+ YL +++
Sbjct: 87  ADLLKKVGK-----------------IPEPVLAYIARQILKGLDYLHTKR 119

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 22/141 (15%)

Query: 72  YVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG 127
           Y  IK     +FGKV         K  ++  + +  +    S+ E  D ++E++++K + 
Sbjct: 2   YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM----SEKEREDALNEVKILKKL- 56

Query: 128 QHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEK 187
            H NII       + G L +++E+A  G+L   ++K +                    E+
Sbjct: 57  NHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKP-------------FPEE 103

Query: 188 DLISFAYQVANGMHYLQSRKV 208
            ++ +  Q+   + YL SRK+
Sbjct: 104 QILDWFVQLCLALKYLHSRKI 124

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 24/124 (19%)

Query: 89  GILKQGIITT------VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD 142
           G +K+G+         VA+K+LK  +  +   +++ E E+M  +     I+ ++GVC  +
Sbjct: 9   GCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPY-IVRMIGVCEAE 67

Query: 143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHY 202
             L +++E A  G L  FL   +                + +T  +++   +QV+ GM Y
Sbjct: 68  A-LMLVMEMASGGPLNKFLSGKK----------------DEITVSNVVELMHQVSMGMKY 110

Query: 203 LQSR 206
           L+ +
Sbjct: 111 LEGK 114

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FGKV+ +E   I     +  V VK LK   S  E  + + + +  +++ QH NI+  LG 
Sbjct: 8   FGKVLLSE---IYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL-QHPNILQCLGQ 63

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKH 164
           C +  P  ++ E+   G+L+ +L + 
Sbjct: 64  CVEAIPYLLVFEYCELGDLKSYLSQE 89

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 22/113 (19%)

Query: 100 AVKMLKEGHSDAEMMDLVSEME----MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHG 155
           AVK +          + V ++E    ++  + QH NI+  LG   ++  LY+ +E  P G
Sbjct: 29  AVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYIFLELVPGG 87

Query: 156 NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           +L   L+K+     +  P+   YT               Q+  G+ YL  R  
Sbjct: 88  SLAKLLKKYGS---FPEPVIRLYTR--------------QILLGLEYLHDRNT 123

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 17/94 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKML------KEGHSDAEMMDLVSEMEMMKMIGQHIN 131
           +F  V+ A+     K+      A+K+L      KE       +    E E++  +  H  
Sbjct: 13  SFSTVVLAKEKETNKE-----YAIKILDKRQLIKEKKVKYVKI----EKEVLTRLNGHPG 63

Query: 132 IINLLGVCTQD-GPLYVIVEFAPHGNLRDFLRKH 164
           II L     QD   LY ++E+AP+G L  ++RK+
Sbjct: 64  IIKLYY-TFQDEENLYFVLEYAPNGELLQYIRKY 96

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 25/132 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V  A  +    +     VA+K++K   S  +   +++E++++K   +H NI+   G
Sbjct: 12  GFGEVYKAR-HKRTGK----EVAIKVIKL-ESKEKKEKIINEIQILKKC-KHPNIVKYYG 64

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF-AYQV 196
              +   L++++EF   G+L+D L+                     LTE   I++   ++
Sbjct: 65  SYLKKDELWIVMEFCSGGSLKDLLKST----------------NQTLTESQ-IAYVCKEL 107

Query: 197 ANGMHYLQSRKV 208
             G+ YL S  +
Sbjct: 108 LKGLEYLHSNGI 119

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 30/138 (21%)

Query: 76  KCAFGKVICA--EANG---ILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHI 130
           K +FG V     +A+     +KQ  ++ +  +  +E   +A ++   ++++         
Sbjct: 10  KGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVL---AKLD-------SS 59

Query: 131 NIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLI 190
            II         G L +++E+A +G+L   L+  R               G  L E  + 
Sbjct: 60  YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQR---------------GRPLPEDQVW 104

Query: 191 SFAYQVANGMHYLQSRKV 208
            F  Q+  G+ +L S+K+
Sbjct: 105 RFFIQILLGLAHLHSKKI 122

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 19/111 (17%)

Query: 99  VAVKMLKEGHSDAEMMDL-VSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           VA+K   E   D  +  + + E+ M+K + +H N++NL+ V  +   LY++ EF  H  L
Sbjct: 29  VAIKKFLESEDDKMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLVFEFVDHTVL 87

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            D                  Y NG  L E  +  + +Q+  G+ +  S  +
Sbjct: 88  DDL---------------EKYPNG--LDESRVRKYLFQILRGIEFCHSHNI 121

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 27/133 (20%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFGKV  A+    G L        A K++ E  S+ E+ D + E+E++     H  I+ L
Sbjct: 24  AFGKVYKAKNKETGAL-------AAAKVI-ETKSEEELEDYMVEIEILATC-NHPYIVKL 74

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG    DG L++++EF P G +   +         E   G        LTE  +     Q
Sbjct: 75  LGAFYWDGKLWIMIEFCPGGAVDAIM--------LELDRG--------LTEPQIQVICRQ 118

Query: 196 VANGMHYLQSRKV 208
           +   + YL S K+
Sbjct: 119 MLEALQYLHSMKI 131

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 28/133 (21%), Positives = 65/133 (48%), Gaps = 24/133 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAV-KM-LKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           +FGK+  A+A    +  +I  + + KM +KE  +  + + L+++M+       H NI+  
Sbjct: 12  SFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMK-------HPNIVTF 64

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
                ++G L++++E+   G+L   + + R               G + +E  ++S+  Q
Sbjct: 65  FASFQENGRLFIVMEYCDGGDLMKRINRQR---------------GVLFSEDQILSWFVQ 109

Query: 196 VANGMHYLQSRKV 208
           ++ G+ ++  RK+
Sbjct: 110 ISLGLKHIHDRKI 122

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 23/117 (19%)

Query: 97  TTVAVKMLK-----EGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF 151
           T +AVK +          +  +  L  E+ +M  +  H +II +LG   +D    + VE+
Sbjct: 26  TLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHFNLFVEW 84

Query: 152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              G++   L K+                     E  +I++  Q+  G+ YL   ++
Sbjct: 85  MAGGSVSHLLSKYGA-----------------FKEAVIINYTEQLLRGLSYLHENQI 124

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	258
KOG0595|consensus	429		100.0
KOG0575|consensus	592		100.0
KOG0581|consensus	364		100.0
KOG1187|consensus	361		100.0
KOG0192|consensus	362		100.0
KOG0598|consensus	357		100.0
KOG0615|consensus	475		100.0
KOG1026|consensus	774		100.0
KOG0616|consensus	355		100.0
KOG0194|consensus	474		100.0
KOG0197|consensus	468		100.0
KOG0591|consensus	375		100.0
KOG0600|consensus	560		100.0
KOG0593|consensus	396		100.0
KOG0694|consensus	694		100.0
KOG0578|consensus	550		100.0
KOG0597|consensus	808		100.0
KOG0583|consensus	370		100.0
KOG1095|consensus	1025		100.0
KOG0611|consensus	668		100.0
KOG0661|consensus	538		100.0
KOG0659|consensus	318		100.0
KOG0605|consensus	550		99.98
KOG0592|consensus	604		99.97
KOG0193|consensus	678		99.97
KOG4721|consensus	904		99.97
KOG0198|consensus	313		99.97
KOG0196|consensus	996		99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
KOG0580|consensus	281		99.97
KOG0663|consensus	419		99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
KOG1094|consensus	807		99.97
KOG4236|consensus	888		99.97
KOG0589|consensus	426		99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
KOG0594|consensus	323		99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.97
KOG0582|consensus	516		99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
KOG0201|consensus	467		99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
KOG0032|consensus	382		99.97
KOG0658|consensus	364		99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
KOG4257|consensus	974		99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
KOG4250|consensus	732		99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
KOG0588|consensus	786		99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.97
KOG0579|consensus	1187		99.97
KOG0586|consensus	596		99.96
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
KOG0584|consensus	632		99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.96
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.96
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.96
KOG4278|consensus	1157		99.96
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.96
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.96
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.96
KOG0033|consensus	355		99.96
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.96
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
KOG0577|consensus	948		99.96
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.96
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.96
KOG0574|consensus	502		99.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.96
KOG0667|consensus	586		99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
KOG0610|consensus	459		99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
KOG0690|consensus	516		99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.96
KOG0585|consensus	576		99.96
PHA02988	283	hypothetical protein; Provisional	99.96
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.96
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.96
KOG0199|consensus	1039		99.95
PHA03212	391	serine/threonine kinase US3; Provisional	99.95
KOG0660|consensus	359		99.95
KOG3653|consensus	534		99.95
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.95
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.95
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.95
KOG4279|consensus	1226		99.95
KOG0607|consensus	463		99.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.95
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.95
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.95
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.95
KOG0200|consensus	609		99.95
KOG1989|consensus	738		99.95
KOG4717|consensus	864		99.95
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.95
PTZ00283	496	serine/threonine protein kinase; Provisional	99.95
KOG2052|consensus	513		99.95
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.95
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.95
KOG0696|consensus	683		99.95
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.95
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.95
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.95
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.95
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.95
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.95
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.95
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.95
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.95
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.95
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.95
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.95
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
PTZ00036	440	glycogen synthase kinase; Provisional	99.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.95
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.95
KOG0599|consensus	411		99.95
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.95
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.95
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.95
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.95
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.95
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.95
PHA03209	357	serine/threonine kinase US3; Provisional	99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.95
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.95
PHA03211	461	serine/threonine kinase US3; Provisional	99.95
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.95
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.95
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.95
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.95
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.95
KOG0986|consensus	591		99.94
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.94
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.94
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.94
KOG1152|consensus	772		99.94
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.94
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.94
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.94
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.94
PHA03207	392	serine/threonine kinase US3; Provisional	99.94
KOG0604|consensus	400		99.94
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.94
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.94
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.94
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.94
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.94
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.94
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.94
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.94
KOG0662|consensus	292		99.94
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.94
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.94
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.94
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.94
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.94
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.94
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.94
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.94
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.94
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.94
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.94
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.94
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.94
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.94
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.94
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.94
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.94
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.94
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.94
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.94
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.94
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.94
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.94
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.94
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.94
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.94
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.94
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.94
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.94
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.94
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.94
PTZ00284	467	protein kinase; Provisional	99.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.94
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.94
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.94
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.94
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.94
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
KOG0666|consensus	438		99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.94
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.94
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.94
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.94
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.94
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
KOG1025|consensus	1177		99.94
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.94
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.94
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.94
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.94
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.93
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.93
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.93
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.93
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.93
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.93
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.93
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.93
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.93
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.93
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.93
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.93
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.93
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.93
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.93
KOG0612|consensus	1317		99.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.93
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.93
KOG0587|consensus	953		99.93
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.93
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.93
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.93
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.93
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.93
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.93
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.93
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.93
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.93
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.93
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.93
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.93
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.93
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.93
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.93
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.93
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.93
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.93
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.93
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.93
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.93
KOG0695|consensus	593		99.93
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.93
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.93
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.93
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.93
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.93
PHA03210	501	serine/threonine kinase US3; Provisional	99.93
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.92
KOG4645|consensus	1509		99.92
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.92
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.92
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.92
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.92
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.92
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.92
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.92
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.92
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.92
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.92
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.92
PLN00009	294	cyclin-dependent kinase A; Provisional	99.92
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.92
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.92
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.92
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.92
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.92
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.92
KOG0614|consensus	732		99.92
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.92
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.92
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.92
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.92
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.92
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.92
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.92
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.92
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.92
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.92
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.92
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.92
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.92
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.91
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.91
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.91
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.91
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.91
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.91
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.91
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.91
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.91
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.91
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.91
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.91
KOG1151|consensus	775		99.91
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.91
KOG2345|consensus	302		99.91
KOG0608|consensus	1034		99.91
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.91
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.91
KOG0984|consensus	282		99.91
KOG0669|consensus	376		99.91
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.91
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.9
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.9
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.9
KOG0596|consensus	677		99.9
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.9
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.9
PHA02882	294	putative serine/threonine kinase; Provisional	99.9
KOG1006|consensus	361		99.9
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.9
KOG1035|consensus	1351		99.9
KOG0664|consensus	449		99.9
KOG0983|consensus	391		99.9
KOG0576|consensus	829		99.9
KOG0671|consensus	415		99.89
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.89
PRK09188	365	serine/threonine protein kinase; Provisional	99.89
KOG1027|consensus	903		99.88
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.88
KOG0668|consensus	338		99.88
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.88
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.87
KOG1167|consensus	418		99.87
KOG1345|consensus	378		99.86
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.86
KOG0603|consensus	612		99.86
KOG1024|consensus	563		99.85
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.85
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.82
KOG0670|consensus	752		99.82
KOG1290|consensus	590		99.81
KOG1163|consensus	341		99.8
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.78
KOG0665|consensus	369		99.77
KOG1164|consensus	322		99.76
PRK10345	210	hypothetical protein; Provisional	99.75
KOG1165|consensus	449		99.74
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.73
PRK14879	211	serine/threonine protein kinase; Provisional	99.69
KOG1166|consensus	974		99.67
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.66
smart00090	237	RIO RIO-like kinase.	99.66
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.64
PLN00181	793	protein SPA1-RELATED; Provisional	99.63
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.62
PRK12274	218	serine/threonine protein kinase; Provisional	99.61
KOG0590|consensus	601		99.6
KOG0195|consensus	448		99.57
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.53
KOG0603|consensus	612		99.47
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.47
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.47
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.43
KOG1240|consensus	1431		99.26
KOG4158|consensus	598		99.26
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.24
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.23
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.11
KOG1023|consensus	484		99.1
KOG1033|consensus	516		99.05
KOG0606|consensus	1205		99.04
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.0
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.99
KOG3087|consensus	229		98.98
KOG0590|consensus	601		98.97
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.94
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.9
KOG1266|consensus	458		98.78
KOG0601|consensus	524		98.72
KOG1243|consensus	690		98.67
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.57
KOG0601|consensus	524		98.56
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.52
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.27
KOG3741|consensus	655		98.2
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.99
KOG0576|consensus	829		97.95
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.86
PRK09902	216	hypothetical protein; Provisional	97.75
KOG0606|consensus	1205		97.73
PLN02876	822	acyl-CoA dehydrogenase	97.48
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.47
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.45
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.42
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.41
PRK10593	297	hypothetical protein; Provisional	97.31
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.25
PF01636	239	APH: Phosphotransferase enzyme family This family	97.03
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.03
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.02
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.88
KOG1235|consensus	538		96.4
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	96.35
KOG2270|consensus	520		95.84
PRK09550	401	mtnK methylthioribose kinase; Reviewed	95.43
KOG2137|consensus	700		95.43
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.7
KOG1035|consensus	1351		93.97
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	93.91
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	93.14
KOG1033|consensus	516		92.01
COG4248	637	Uncharacterized protein with protein kinase and he	91.75
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	90.53
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	90.25
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	90.09
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	89.85
PLN02756	418	S-methyl-5-thioribose kinase	88.65
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	88.55
KOG2268|consensus	465		87.11
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	82.04
KOG1236|consensus	565		81.64

>KOG0595|consensus

Probab=100.00  E-value=3.4e-41  Score=281.04  Aligned_cols=160  Identities=22%  Similarity=0.338  Sum_probs=148.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|+++     .++..||||.+.... ..+.++.+..|+.+|+.+ +|||||.+++++.+++.+||||||
T Consensus        17 ~iG~GsfavVykg~h~-----~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~i~lVMEy   90 (429)
T KOG0595|consen   17 EIGSGSFAVVYKGRHK-----KSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDFIYLVMEY   90 (429)
T ss_pred             hccCcceEEEEEeEec-----cCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCeEEEEEEe
Confidence            5999999999999998     677999999997654 566678899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------------  214 (258)
                      |.+|||.+||++.+.                 +++..++.++.||+.||++||+++|||||||                 
T Consensus        91 C~gGDLs~yi~~~~~-----------------l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~  153 (429)
T KOG0595|consen   91 CNGGDLSDYIRRRGR-----------------LPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPV  153 (429)
T ss_pred             CCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCce
Confidence            999999999999876                 9999999999999999999999999999995                 


Q ss_pred             --ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        |+|||+|+....+.  .+.+|++.|||||++..++|+.|+|+-
T Consensus       154 LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLW  198 (429)
T KOG0595|consen  154 LKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLW  198 (429)
T ss_pred             EEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHH
Confidence              78999999877664  689999999999999999999999963

>KOG0575|consensus

Probab=100.00  E-value=2e-37  Score=269.80  Aligned_cols=163  Identities=23%  Similarity=0.364  Sum_probs=147.9

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      .....||+|+|++||.++..     .++..||+|++.+..  ....++.+.+|+++.+++ +|||||+++++|++.+++|
T Consensus        21 ~~g~~LGkGgFA~cYe~~~~-----~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVY   94 (592)
T KOG0575|consen   21 KRGRFLGKGGFARCYEARDL-----DTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVY   94 (592)
T ss_pred             eeeeeeccCcceEEEEEEEc-----CCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceE
Confidence            44558999999999999986     588999999996532  456678899999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      ||+|+|++|+|..++++...                 +++.+++.++.||+.||.|||+++|||||||            
T Consensus        95 ivLELC~~~sL~el~Krrk~-----------------ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~V  157 (592)
T KOG0575|consen   95 IVLELCHRGSLMELLKRRKP-----------------LTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNV  157 (592)
T ss_pred             EEEEecCCccHHHHHHhcCC-----------------CCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcE
Confidence            99999999999999996554                 9999999999999999999999999999995            


Q ss_pred             -ccCCCcceeeecc---CCccccccccccccccccCCCCcccce
Q psy12228        215 -FIGFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 -i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                       |+|||||......   ..+.+|||.|+|||++....++..+||
T Consensus       158 KIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDi  201 (592)
T KOG0575|consen  158 KIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDI  201 (592)
T ss_pred             EecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhh
Confidence             8899999987733   479999999999999999999999997

>KOG0581|consensus

Probab=100.00  E-value=3e-37  Score=255.03  Aligned_cols=161  Identities=20%  Similarity=0.257  Sum_probs=149.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc-EEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP-LYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~-~~lv~e  150 (258)
                      ..||+|..|.||++.++     .+++.+|+|++.........+++.+|++++..+ +||+||.+||+|..++. +.|+||
T Consensus        85 ~~lG~G~gG~V~kv~Hk-----~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~mE  158 (364)
T KOG0581|consen   85 GVLGSGNGGTVYKVRHK-----PTGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISICME  158 (364)
T ss_pred             hhcccCCCcEEEEEEEc-----CCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEeehh
Confidence            37999999999999998     789999999997776777889999999999999 99999999999999985 999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------------cc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------------FI  216 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------------i~  216 (258)
                      ||.+|+|.++++..+.                 +++..+..++.+|++||.|||+ ++|||||||             ||
T Consensus       159 YMDgGSLd~~~k~~g~-----------------i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKic  221 (364)
T KOG0581|consen  159 YMDGGSLDDILKRVGR-----------------IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKIC  221 (364)
T ss_pred             hcCCCCHHHHHhhcCC-----------------CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEec
Confidence            9999999999998766                 9999999999999999999995 999999995             89


Q ss_pred             CCCcceeeeccC-CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||.++.+.... .+++||..|||||.+.+..|+.++||=
T Consensus       222 DFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIW  261 (364)
T KOG0581|consen  222 DFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIW  261 (364)
T ss_pred             cccccHHhhhhhcccccccccccChhhhcCCcCCccccee
Confidence            999998765554 789999999999999999999999983

>KOG1187|consensus

Probab=100.00  E-value=5.5e-37  Score=264.18  Aligned_cols=180  Identities=24%  Similarity=0.312  Sum_probs=155.9

Q ss_pred             cccceeeeeceeeec-cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcc
Q psy12228         54 HDKVSLINVLTVTIN-SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINI  132 (258)
Q Consensus        54 ~~~~~~~~~~~~~~~-~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nI  132 (258)
                      ...|++.++..+|++ +..+.||+|+||.||+|...      ++..||||.+....... ..+|.+|+.++.++ +|||+
T Consensus        62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~------~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l-~H~Nl  133 (361)
T KOG1187|consen   62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS------DGTVVAVKRLSSNSGQG-EREFLNEVEILSRL-RHPNL  133 (361)
T ss_pred             cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC------CCCEEEEEEecCCCCcc-hhHHHHHHHHHhcC-CCcCc
Confidence            446889999999988 88899999999999999996      44889999887653332 44599999999999 89999


Q ss_pred             cceeeeEEcCCc-EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC---Cc
Q psy12228        133 INLLGVCTQDGP-LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR---KV  208 (258)
Q Consensus       133 v~l~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~i  208 (258)
                      |+++|||.+.+. .+||+|||++|+|.++|.....              . .++|.++.+||.++|+||+|||+.   .|
T Consensus       134 v~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~--------------~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~i  198 (361)
T KOG1187|consen  134 VKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKG--------------E-PLDWETRLKIALGAARGLAYLHEGCPPPI  198 (361)
T ss_pred             ccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCC--------------C-CCCHHHHHHHHHHHHHHHHHHccCCCCCE
Confidence            999999999884 9999999999999999988653              1 599999999999999999999995   49


Q ss_pred             cccCcc-------------ccCCCcceeeec-cCC--cc-ccccccccccccccCCCCcccceeE
Q psy12228        209 GNDAVR-------------FIGFDLCILVFF-HDS--TL-LKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       209 iH~DlK-------------i~dfgl~~~~~~-~~~--~~-~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      ||||||             ++|||+|+.... ...  .. .||.+|+|||++..+..++|+||+-
T Consensus       199 iHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVyS  263 (361)
T KOG1187|consen  199 IHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYS  263 (361)
T ss_pred             ecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCccccccc
Confidence            999995             899999976554 332  22 8999999999999999999999963

>KOG0192|consensus

Probab=100.00  E-value=1.7e-36  Score=259.90  Aligned_cols=160  Identities=26%  Similarity=0.396  Sum_probs=140.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEE-EEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-cEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITT-VAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-PLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~-vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-~~~lv~  149 (258)
                      .||+|+||+||+|.+++       .. ||||.+.... +....+.|.+|+.+|.++ +|||||+++|+|..+. ..+|||
T Consensus        48 ~iG~G~~g~V~~~~~~g-------~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~f~G~~~~~~~~~~iVt  119 (362)
T KOG0192|consen   48 VLGSGSFGTVYKGKWRG-------TDVVAVKIISDPDFDDESRKAFRREASLLSRL-RHPNIVQFYGACTSPPGSLCIVT  119 (362)
T ss_pred             hcccCCceeEEEEEeCC-------ceeEEEEEecchhcChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCceEEEE
Confidence            59999999999999984       44 9999997543 333367899999999999 9999999999999887 799999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-ccccCcc--------------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK-VGNDAVR--------------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-iiH~DlK--------------  214 (258)
                      ||+++|+|.++|.....               ..+++..++.|+.|||+||.|||+++ |||||||              
T Consensus       120 Ey~~~GsL~~~l~~~~~---------------~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~K  184 (362)
T KOG0192|consen  120 EYMPGGSLSVLLHKKRK---------------RKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLK  184 (362)
T ss_pred             EeCCCCcHHHHHhhccc---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEE
Confidence            99999999999988411               23999999999999999999999999 9999995              


Q ss_pred             ccCCCcceeeec---cCCccccccccccccccc--cCCCCccccee
Q psy12228        215 FIGFDLCILVFF---HDSTLLKTTSTIASLILR--NQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~---~~~~~~gt~~y~aPE~~~--~~~~s~~~Dv~  255 (258)
                      |+|||+++....   ......||+.|||||++.  ...|+.|+||+
T Consensus       185 I~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~Dvy  230 (362)
T KOG0192|consen  185 IADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVY  230 (362)
T ss_pred             ECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhh
Confidence            899999987654   234589999999999999  56999999986

>KOG0598|consensus

Probab=100.00  E-value=3.6e-36  Score=248.57  Aligned_cols=160  Identities=21%  Similarity=0.295  Sum_probs=146.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||+|+.++.+     .+++.+|+|++++..  ...+.+...+|..+|..+ +||+||+++..|++.+.+|||+|
T Consensus        32 viGkG~fGkV~~Vrk~-----dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLylVld  105 (357)
T KOG0598|consen   32 VIGKGSFGKVFQVRKK-----DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYLVLD  105 (357)
T ss_pred             eeeccCCceEEEEEEc-----ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEEEEe
Confidence            8999999999999988     688999999997643  334678899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+.||.|...|.+.+.                 ++++.++.|+..|+.||.|||++||||||||             ++|
T Consensus       106 ~~~GGeLf~hL~~eg~-----------------F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtD  168 (357)
T KOG0598|consen  106 YLNGGELFYHLQREGR-----------------FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTD  168 (357)
T ss_pred             ccCCccHHHHHHhcCC-----------------cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEec
Confidence            9999999999999887                 9999999999999999999999999999997             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||||+.....   ..+++||+.|||||++.+.+|+.++||-
T Consensus       169 FgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWW  209 (357)
T KOG0598|consen  169 FGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWW  209 (357)
T ss_pred             cccchhcccCCCccccccCCccccChHHHhcCCCCcccchH
Confidence            9999954332   3678999999999999999999999973

>KOG0615|consensus

Probab=100.00  E-value=4.1e-36  Score=250.80  Aligned_cols=161  Identities=23%  Similarity=0.280  Sum_probs=139.8

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH------HHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA------EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP  144 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~  144 (258)
                      ...||+|+||.|-+|..+     .+++.||||++++.....      ......+|+++|++| +|||||+++++|..++.
T Consensus       177 ~~~LGsGafg~Vkla~e~-----~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  177 SKTLGSGAFGLVKLAYEK-----KTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             eeeecCCceeEEEEEEEc-----ccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeeeecCCc
Confidence            347899999999999988     799999999997543211      223467999999999 99999999999999999


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .||||||+.||+|.+++-.++.                 +.+..-..++.|++.|+.|||++||+|||||          
T Consensus       251 ~YmVlE~v~GGeLfd~vv~nk~-----------------l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~  313 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVANKY-----------------LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDA  313 (475)
T ss_pred             eEEEEEEecCccHHHHHHhccc-----------------cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCC
Confidence            9999999999999999998876                 8888889999999999999999999999995          


Q ss_pred             ------ccCCCcceeeeccC--CccccccccccccccccCCCC---cccce
Q psy12228        215 ------FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVS---VLLDL  254 (258)
Q Consensus       215 ------i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s---~~~Dv  254 (258)
                            |+|||+|+......  .+.||||.|.|||++.++.++   .++|+
T Consensus       314 e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDi  364 (475)
T KOG0615|consen  314 EDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDI  364 (475)
T ss_pred             cceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchhee
Confidence                  88999999765443  689999999999999886553   36675

>KOG1026|consensus

Probab=100.00  E-value=3.9e-36  Score=270.50  Aligned_cols=178  Identities=29%  Similarity=0.424  Sum_probs=155.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||+||+|+..+.....+...||||.++...+.+...+|.+|++.|..+ +|||||+|+|.|..++.+++|+|||
T Consensus       493 eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~~P~~MvFEYm  571 (774)
T KOG1026|consen  493 ELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL-QHPNIVRLLGVCREGDPLCMVFEYM  571 (774)
T ss_pred             hhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccCCeeEEEEEec
Confidence            799999999999999887777788999999999987777889999999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~dfg  219 (258)
                      ..|||.+||+.+.+.........+   ...+++..+.+.||.|||.||+||.++.+|||||             ||+|||
T Consensus       572 ~~GDL~eFLra~sP~a~~~~~g~~---~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfG  648 (774)
T KOG1026|consen  572 DHGDLHEFLRARSPKADKLASGQD---TPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFG  648 (774)
T ss_pred             ccccHHHHHHhhCCccccccCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccc
Confidence            999999999987763322211111   1456999999999999999999999999999999             899999


Q ss_pred             cceeeeccCCcccc-----ccccccccccccCCCCcccce
Q psy12228        220 LCILVFFHDSTLLK-----TTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       220 l~~~~~~~~~~~~g-----t~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      +++.....+....+     ..+|||||.|..++||++|||
T Consensus       649 LsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDV  688 (774)
T KOG1026|consen  649 LSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDV  688 (774)
T ss_pred             cchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhh
Confidence            99987666643333     378999999999999999997

>KOG0616|consensus

Probab=100.00  E-value=6.5e-35  Score=234.55  Aligned_cols=159  Identities=21%  Similarity=0.300  Sum_probs=148.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||.|+||+|.+++.+     .++..+|+|+++...  .-++.+...+|..+|+.+ .||+++++++.|.+...++||||
T Consensus        51 tlGtGSFGrV~LVr~k-----~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~lymvme  124 (355)
T KOG0616|consen   51 TLGTGSFGRVHLVREK-----HSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSNLYMVME  124 (355)
T ss_pred             eeccCccceEEEEEEc-----cCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCeEEEEEe
Confidence            8999999999999998     678999999997542  345667899999999999 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |.+||.|..+|++.+.                 +++..++.+|.||+.||+|||+++|++||||             ++|
T Consensus       125 yv~GGElFS~Lrk~~r-----------------F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitD  187 (355)
T KOG0616|consen  125 YVPGGELFSYLRKSGR-----------------FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITD  187 (355)
T ss_pred             ccCCccHHHHHHhcCC-----------------CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEe
Confidence            9999999999999887                 9999999999999999999999999999995             889


Q ss_pred             CCcceeeeccCCccccccccccccccccCCCCcccce
Q psy12228        218 FDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       218 fgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      ||+|+.......+.||||.|+|||.+..++|+.++|+
T Consensus       188 FGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDW  224 (355)
T KOG0616|consen  188 FGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDW  224 (355)
T ss_pred             ccceEEecCcEEEecCCccccChHHhhcCCCCcchhH
Confidence            9999998888889999999999999999999999996

>KOG0194|consensus

Probab=100.00  E-value=2.5e-34  Score=250.58  Aligned_cols=166  Identities=22%  Similarity=0.318  Sum_probs=139.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecC--CCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKE--GHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||+|.++-.... ....||+|..+.  ........+|++|+++|+++ +|||||++||++....+++|||
T Consensus       163 kkLGeGaFGeV~~G~l~~~~~~-~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~~Pl~ivm  240 (474)
T KOG0194|consen  163 KKLGEGAFGEVFKGKLKLKNGF-KVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLEEPLMLVM  240 (474)
T ss_pred             ceeecccccEEEEEEEEecCCc-eeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCccEEEE
Confidence            4899999999999998721110 112399999985  34677789999999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------ccc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~  216 (258)
                      |+|+||+|.+||++...                .++..+...++.+.|.||+|||++++|||||             ||+
T Consensus       241 El~~gGsL~~~L~k~~~----------------~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKIS  304 (474)
T KOG0194|consen  241 ELCNGGSLDDYLKKNKK----------------SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKIS  304 (474)
T ss_pred             EecCCCcHHHHHHhCCC----------------CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeC
Confidence            99999999999998763                3999999999999999999999999999998             799


Q ss_pred             CCCcceeeeccC--C-ccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--S-TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~-~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.-..-.  . ..---.+|+|||.+....||+++||.
T Consensus       305 DFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~  346 (474)
T KOG0194|consen  305 DFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVW  346 (474)
T ss_pred             ccccccCCcceeeccccccCcceecChhhhccCccccccchh
Confidence            999988543111  1 11122689999999999999999985

>KOG0197|consensus

Probab=100.00  E-value=7e-35  Score=250.87  Aligned_cols=159  Identities=31%  Similarity=0.471  Sum_probs=136.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|.||.|+.|.+++      ...||+|.++...  ...+.|.+|+.+|++| +|+|||+++|+|..++.++|||||
T Consensus       212 ~~LG~G~FG~V~~g~~~~------~~~vavk~ik~~~--m~~~~f~~Ea~iMk~L-~H~~lV~l~gV~~~~~piyIVtE~  282 (468)
T KOG0197|consen  212 RELGSGQFGEVWLGKWNG------STKVAVKTIKEGS--MSPEAFLREAQIMKKL-RHEKLVKLYGVCTKQEPIYIVTEY  282 (468)
T ss_pred             HHhcCCccceEEEEEEcC------CCcccceEEeccc--cChhHHHHHHHHHHhC-cccCeEEEEEEEecCCceEEEEEe
Confidence            379999999999999973      3579999998742  2235699999999999 999999999999998899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~df  218 (258)
                      |+.|+|.+||+....               ..+...+++.++.|||.||+||+++++|||||             ||+||
T Consensus       283 m~~GsLl~yLr~~~~---------------~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDF  347 (468)
T KOG0197|consen  283 MPKGSLLDYLRTREG---------------GLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDF  347 (468)
T ss_pred             cccCcHHHHhhhcCC---------------CccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccc
Confidence            999999999998332               34899999999999999999999999999999             89999


Q ss_pred             CcceeeeccCC-ccccc---cccccccccccCCCCcccce
Q psy12228        219 DLCILVFFHDS-TLLKT---TSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~~~~-~~~gt---~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      |+|+....... ...|.   ..|.|||.+...++|.||||
T Consensus       348 GLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDV  387 (468)
T KOG0197|consen  348 GLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDV  387 (468)
T ss_pred             ccccccCCCceeecCCCCCCceecCHHHHhhCCcccccce
Confidence            99994332221 11222   57999999999999999998

>KOG0591|consensus

Probab=100.00  E-value=1e-35  Score=237.91  Aligned_cols=163  Identities=18%  Similarity=0.264  Sum_probs=143.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceee-eEEcCCc-EEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLG-VCTQDGP-LYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~-~~~~~~~-~~lv~  149 (258)
                      +||+|.||.||++...     .++..||.|.++-.. +.+.++.+..|+.+|++| +|||||++++ .+..++. ++|||
T Consensus        26 ~IG~GsFg~vykv~~~-----~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   26 KIGRGSFGEVYKVQCL-----LDGKLVALKKIQFGMMDAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHcCCcchheEEeeec-----cCcchhhhhhcchhhccHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchhhHHHH
Confidence            8999999999999998     688999999997432 566778899999999999 9999999999 4444444 89999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh--CC--ccccCcc-----------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS--RK--VGNDAVR-----------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~--~~--iiH~DlK-----------  214 (258)
                      |+|..|||.+.++....             ..+.+++..++.++.|++.||.++|+  .+  |+|||||           
T Consensus       100 E~c~~GDLsqmIk~~K~-------------qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gv  166 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKK-------------QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGV  166 (375)
T ss_pred             HhhcccCHHHHHHHHHh-------------ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCc
Confidence            99999999999987654             34669999999999999999999999  56  9999996           


Q ss_pred             --ccCCCcceeeeccC---CccccccccccccccccCCCCcccce
Q psy12228        215 --FIGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 --i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                        +.|||+++.+....   .+.+|||.||+||.+.+.+|+.+|||
T Consensus       167 vKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDi  211 (375)
T KOG0591|consen  167 VKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDI  211 (375)
T ss_pred             eeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhH
Confidence              67999999766654   58999999999999999999999997

>KOG0600|consensus

Probab=100.00  E-value=3.4e-34  Score=244.65  Aligned_cols=160  Identities=21%  Similarity=0.304  Sum_probs=139.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv~  149 (258)
                      +||+|+||.||+|+..     .+++.||+|.++.+. .+.......+||.+|++| +||||+++.++..+.  +.+|||+
T Consensus       124 kIGeGTyg~VYkAr~~-----~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~siYlVF  197 (560)
T KOG0600|consen  124 KIGEGTYGQVYKARDL-----ETGKIVALKKVRFDNEKEGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGSIYLVF  197 (560)
T ss_pred             HhcCcchhheeEeeec-----ccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCceEEEEE
Confidence            6999999999999998     789999999997654 233345577999999999 999999999999876  6899999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      |||++ ||.-++...+-                .+++.++..||.||+.||+|||++||+|||||             |+
T Consensus       198 eYMdh-DL~GLl~~p~v----------------kft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKia  260 (560)
T KOG0600|consen  198 EYMDH-DLSGLLSSPGV----------------KFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIA  260 (560)
T ss_pred             ecccc-hhhhhhcCCCc----------------ccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEec
Confidence            99998 99998887543                39999999999999999999999999999995             89


Q ss_pred             CCCcceeeeccC----Ccccccccccccccccc-CCCCccccee
Q psy12228        217 GFDLCILVFFHD----STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      |||||+.+....    ...+-|.+|.|||++.| ..|+.++|+-
T Consensus       261 DFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlW  304 (560)
T KOG0600|consen  261 DFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLW  304 (560)
T ss_pred             cccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeeh
Confidence            999999765554    45677899999999987 5789999974

>KOG0593|consensus

Probab=100.00  E-value=1.8e-33  Score=227.05  Aligned_cols=159  Identities=17%  Similarity=0.252  Sum_probs=140.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ++|+|+||.||+|+.+     .+|+.||||.+....+ ....+-.++|+++|+++ +|+|+|.++.+|.....++||+||
T Consensus         9 kvGEGSYGvV~KCrnk-----~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    9 KVGEGSYGVVMKCRNK-----DTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             ccccCcceEEEEeccC-----CcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeEEEeee
Confidence            7899999999999998     7999999999976544 33446688999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      |+. ++.+-|.....                .++...+..|+.|++.|+.|+|++++||||||             +|||
T Consensus        83 ~dh-TvL~eLe~~p~----------------G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDF  145 (396)
T KOG0593|consen   83 CDH-TVLHELERYPN----------------GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDF  145 (396)
T ss_pred             cch-HHHHHHHhccC----------------CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccc
Confidence            998 77777776553                38999999999999999999999999999995             8999


Q ss_pred             Ccceeeec-cC--Ccccccccccccccccc-CCCCcccce
Q psy12228        219 DLCILVFF-HD--STLLKTTSTIASLILRN-QKVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~-~~--~~~~gt~~y~aPE~~~~-~~~s~~~Dv  254 (258)
                      |+|+.... ++  ..++.|.+|.|||.+.+ -+|+.++||
T Consensus       146 GFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDi  185 (396)
T KOG0593|consen  146 GFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDI  185 (396)
T ss_pred             hhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccc
Confidence            99998763 33  46788999999999988 789999997

>KOG0694|consensus

Probab=100.00  E-value=2.2e-33  Score=247.34  Aligned_cols=163  Identities=24%  Similarity=0.372  Sum_probs=144.2

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ....+||+|.||+|++++.+     .++..+|||++++..  .+++.+..+.|..++..+.+||.++.++++|.+.++++
T Consensus       371 ~~l~vLGkGsFGkV~lae~k-----~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  371 RLLAVLGRGSFGKVLLAELK-----GTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             EEEEEeccCcCceEEEEEEc-----CCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            44458999999999999998     678899999998764  55677889999999999978999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+.||++..+.+ ..                 .+++..++.|+..|+.||.|||++|||+||||            
T Consensus       446 fvmey~~Ggdm~~~~~-~~-----------------~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~  507 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHIH-TD-----------------VFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHV  507 (694)
T ss_pred             EEEEecCCCcEEEEEe-cc-----------------cccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcE
Confidence            9999999999443332 22                 39999999999999999999999999999996            


Q ss_pred             -ccCCCcceeee---ccCCccccccccccccccccCCCCcccce
Q psy12228        215 -FIGFDLCILVF---FHDSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 -i~dfgl~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                       |+|||+|+...   ...++++|||.|||||++.+..|+.++||
T Consensus       508 kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDW  551 (694)
T KOG0694|consen  508 KIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDW  551 (694)
T ss_pred             EecccccccccCCCCCccccccCChhhcChhhhccCcccchhhH
Confidence             89999999754   23479999999999999999999999997

>KOG0578|consensus

Probab=100.00  E-value=1.7e-33  Score=243.52  Aligned_cols=160  Identities=22%  Similarity=0.340  Sum_probs=143.2

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..+||+|+.|.||.+...     .++..||||.+... .....+-+++|+.+|+.. +|+|||.++..|...+.+|+|||
T Consensus       278 ~~kigqgaSG~vy~A~~~-----~~~~~VaiK~m~l~-~Q~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  278 FKKIGQGATGGVYVARKI-----STKQEVAIKRMDLR-KQPKKELLLNEILVMRDL-HHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhhhccccccceeeeeec-----cCCceEEEEEEEec-cCCchhhhHHHHHHHHhc-cchHHHHHHHHhcccceeEEEEe
Confidence            447999999999999987     57788999999754 223345689999999999 99999999999998899999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||++|+|.+.+....                  +++.++..++++++.||+|||.+||+|||||             ++|
T Consensus       351 ym~ggsLTDvVt~~~------------------~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltD  412 (550)
T KOG0578|consen  351 YMEGGSLTDVVTKTR------------------MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTD  412 (550)
T ss_pred             ecCCCchhhhhhccc------------------ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEee
Confidence            999999999988754                  8999999999999999999999999999995             899


Q ss_pred             CCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||||.......   .+.+|||+|||||++....|++++||=
T Consensus       413 FGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIW  453 (550)
T KOG0578|consen  413 FGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIW  453 (550)
T ss_pred             eeeeeccccccCccccccCCCCccchhhhhhcccCccccch
Confidence            99998765553   689999999999999999999999983

>KOG0597|consensus

Probab=100.00  E-value=4.1e-33  Score=240.89  Aligned_cols=158  Identities=22%  Similarity=0.381  Sum_probs=146.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCC-CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|+.+     .+...||+|.+.+. ..+++.+.+.+|+++++.+ +|||||.++++|++..++|+|+||
T Consensus         9 ~iG~Gsfg~VYKgrrK-----~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~vVte~   82 (808)
T KOG0597|consen    9 MIGEGSFGRVYKGRRK-----YTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLWVVTEY   82 (808)
T ss_pred             HhcCCccceeeecccc-----cceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEEEEehh
Confidence            7999999999999988     68899999999654 3667788999999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~df  218 (258)
                      +.| +|..+|...+.                 ++++.+..++.+++.||.|||+++|+|||+             |++||
T Consensus        83 a~g-~L~~il~~d~~-----------------lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdF  144 (808)
T KOG0597|consen   83 AVG-DLFTILEQDGK-----------------LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDF  144 (808)
T ss_pred             hhh-hHHHHHHhccC-----------------CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechh
Confidence            987 99999998877                 999999999999999999999999999999             48999


Q ss_pred             CcceeeeccC---CccccccccccccccccCCCCcccce
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      |+|+......   ...-|||.|||||++.+++|+..+|.
T Consensus       145 g~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDl  183 (808)
T KOG0597|consen  145 GLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDL  183 (808)
T ss_pred             hhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhH
Confidence            9999876665   57789999999999999999999995

>KOG0583|consensus

Probab=100.00  E-value=2.1e-32  Score=236.28  Aligned_cols=164  Identities=21%  Similarity=0.281  Sum_probs=141.6

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC----ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH----SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP  144 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~  144 (258)
                      .....||+|+||+|+.|...     .++..||+|+++...    .....+.+.+|+.+++.+..||||++++.++.....
T Consensus        20 ~~~~~lG~GsfgkV~~a~~~-----~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   20 ELGRTLGSGSFGKVKLAKHR-----LTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             eeeeeecCCCCeeEEEeeec-----cCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            33448999999999999987     677999999876531    112345567899999999339999999999999999


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +++||||+.+|+|.+++...+.                 +++..++.++.|++.|++|||++||+|||||          
T Consensus        95 ~~ivmEy~~gGdL~~~i~~~g~-----------------l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~  157 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVNKGR-----------------LKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE  157 (370)
T ss_pred             EEEEEEecCCccHHHHHHHcCC-----------------CChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC
Confidence            9999999999999999999655                 9999999999999999999999999999996          


Q ss_pred             ----ccCCCcceeee-c--cCCccccccccccccccccCC-CC-cccce
Q psy12228        215 ----FIGFDLCILVF-F--HDSTLLKTTSTIASLILRNQK-VS-VLLDL  254 (258)
Q Consensus       215 ----i~dfgl~~~~~-~--~~~~~~gt~~y~aPE~~~~~~-~s-~~~Dv  254 (258)
                          ++|||++.... .  ...+.+||+.|+|||++.+.. |+ .++||
T Consensus       158 ~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDv  206 (370)
T KOG0583|consen  158 GNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADV  206 (370)
T ss_pred             CCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhh
Confidence                78999999763 2  237899999999999999988 85 77886

>KOG1095|consensus

Probab=100.00  E-value=1.7e-32  Score=254.91  Aligned_cols=175  Identities=29%  Similarity=0.431  Sum_probs=149.0

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      .....||+|+||.||.|...+.........||+|.++...+.++..+|++|..+|+.+ +|||||+++|+|.+....+|+
T Consensus       695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~~~~~i~  773 (1025)
T KOG1095|consen  695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDSGPPLIL  773 (1025)
T ss_pred             EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCCCCcEEE
Confidence            3455899999999999998753333335779999999888888999999999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cc
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RF  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki  215 (258)
                      +|||++|||..||++.+....          ....++..+++.++.|||+||.||+++++|||||             ||
T Consensus       774 leyM~gGDL~sflr~~r~~~~----------~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKI  843 (1025)
T KOG1095|consen  774 LEYMEGGDLLSFLRESRPAPF----------QPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKI  843 (1025)
T ss_pred             ehhcccCcHHHHHHhcccccC----------CCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEE
Confidence            999999999999999865211          2345999999999999999999999999999999             79


Q ss_pred             cCCCcceeeeccCC----cc-ccccccccccccccCCCCcccce
Q psy12228        216 IGFDLCILVFFHDS----TL-LKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       216 ~dfgl~~~~~~~~~----~~-~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      +|||+|+.....+.    .. .--.+|||||.+.++.++.|+||
T Consensus       844 aDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDv  887 (1025)
T KOG1095|consen  844 ADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDV  887 (1025)
T ss_pred             cccchhHhhhhchheeccCccccceecCCHHHHhhcccccccch
Confidence            99999995433331    11 12268999999999999999997

>KOG0611|consensus

Probab=100.00  E-value=5.4e-33  Score=232.16  Aligned_cols=158  Identities=21%  Similarity=0.354  Sum_probs=144.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|.||+|-++..+     ..++.||||.|++..  ++++.-.+.+|+++|+.| +||||+.+|.+|+..+.+.||||
T Consensus        60 tLGkGTYGKVk~A~e~-----~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdKIvivME  133 (668)
T KOG0611|consen   60 TLGKGTYGKVKLAYEH-----KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDKIVIVME  133 (668)
T ss_pred             HhcCCcccceeehhhc-----cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCceEEEEEE
Confidence            7999999999999876     688999999997654  556677899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |..+|.|++|+..++.                 +++...+.+++||.+|+.|+|.++++|||||             |+|
T Consensus       134 YaS~GeLYDYiSer~~-----------------LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIAD  196 (668)
T KOG0611|consen  134 YASGGELYDYISERGS-----------------LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIAD  196 (668)
T ss_pred             ecCCccHHHHHHHhcc-----------------ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeec
Confidence            9999999999999887                 9999999999999999999999999999995             899


Q ss_pred             CCcceeeeccC--CccccccccccccccccCCC-Ccccc
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRNQKV-SVLLD  253 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-s~~~D  253 (258)
                      ||++-.+....  .+++|++-|.+||++.|.+| ++.+|
T Consensus       197 FGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVD  235 (668)
T KOG0611|consen  197 FGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVD  235 (668)
T ss_pred             cchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccc
Confidence            99998766554  58999999999999999999 57777

>KOG0661|consensus

Probab=100.00  E-value=2e-33  Score=238.36  Aligned_cols=160  Identities=22%  Similarity=0.279  Sum_probs=141.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-cEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-PLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-~~~lv~e~  151 (258)
                      +||.|+||.||+|...     .++..||||.++.....-+...=++|+..|+++..|||||++..++.+.+ .+++||||
T Consensus        17 klGDGTfGsV~la~~~-----~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~   91 (538)
T KOG0661|consen   17 KLGDGTFGSVYLAKSK-----ETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEF   91 (538)
T ss_pred             HhcCCcceeEEEeeec-----CCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHh
Confidence            7999999999999988     67888999999876544444556799999999944999999999999888 89999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      |+. +|++.++.++                +.+++..++.|+.||++||+|+|.+|+.|||+|             |+||
T Consensus        92 Md~-NLYqLmK~R~----------------r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDF  154 (538)
T KOG0661|consen   92 MDC-NLYQLMKDRN----------------RLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADF  154 (538)
T ss_pred             hhh-hHHHHHhhcC----------------CcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccc
Confidence            987 9999999875                459999999999999999999999999999995             8999


Q ss_pred             CcceeeeccC--Cccccccccccccccc-cCCCCcccce
Q psy12228        219 DLCILVFFHD--STLLKTTSTIASLILR-NQKVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~~~--~~~~gt~~y~aPE~~~-~~~~s~~~Dv  254 (258)
                      |+||.....+  ..++.|.+|.|||++. ..-|+.++||
T Consensus       155 GLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~  193 (538)
T KOG0661|consen  155 GLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDM  193 (538)
T ss_pred             ccccccccCCCcchhhhcccccchHHhhhccccCCchHH
Confidence            9999876655  6789999999999975 4677999997

>KOG0659|consensus

Probab=100.00  E-value=1.6e-32  Score=217.79  Aligned_cols=160  Identities=21%  Similarity=0.295  Sum_probs=140.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|.||.||+|...     .+++.||||.++... .+......++|+..|+.+ +|+||+.++++|.+.+.+.||+|
T Consensus         8 ~~lGEG~~gvVyka~d~-----~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    8 EKLGEGTYGVVYKARDT-----ETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL-KHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             hhhcCcceEEEEEEEec-----CCCcEEEEEEeeccccccCccHHHHHHHHHHHHc-cCcchhhhhhhccCCCceEEEEE
Confidence            37999999999999988     689999999997643 223345688999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |++. +|...++....                .++..++..|+.++++|++|||++.|+|||||             ++|
T Consensus        82 fm~t-dLe~vIkd~~i----------------~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiAD  144 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKNI----------------ILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIAD  144 (318)
T ss_pred             eccc-cHHHHhccccc----------------ccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeec
Confidence            9997 99999988653                49999999999999999999999999999995             899


Q ss_pred             CCcceeeeccCC---cccccccccccccccc-CCCCcccce
Q psy12228        218 FDLCILVFFHDS---TLLKTTSTIASLILRN-QKVSVLLDL  254 (258)
Q Consensus       218 fgl~~~~~~~~~---~~~gt~~y~aPE~~~~-~~~s~~~Dv  254 (258)
                      ||+|+.......   ..+-|.+|.|||.+.| +.|+..+||
T Consensus       145 FGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDm  185 (318)
T KOG0659|consen  145 FGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDM  185 (318)
T ss_pred             ccchhccCCCCcccccceeeeeccChHHhccchhcCCcchh
Confidence            999998766542   3367899999999877 688999996

>KOG0605|consensus

Probab=99.98  E-value=3.6e-32  Score=233.82  Aligned_cols=159  Identities=19%  Similarity=0.212  Sum_probs=142.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||.||+|+-+     .+|..+|+|++++..  ...+.+.++.|-.+|... .+|+||++|..|.+.+++|||||
T Consensus       148 ~IgkGAfGeVrLarKk-----~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~LYLiME  221 (550)
T KOG0605|consen  148 VIGKGAFGEVRLARKK-----DTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEYLYLIME  221 (550)
T ss_pred             eeccccceeEEEEEEc-----cCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCeeEEEEE
Confidence            8999999999999988     799999999998643  345678899999999997 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |++|||+..+|.+.+.                 |++..++.|+.+++.|++-||..|+||||||             ++|
T Consensus       222 ylPGGD~mTLL~~~~~-----------------L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSD  284 (550)
T KOG0605|consen  222 YLPGGDMMTLLMRKDT-----------------LTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSD  284 (550)
T ss_pred             ecCCccHHHHHHhcCc-----------------CchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeecc
Confidence            9999999999998876                 9999999999999999999999999999996             889


Q ss_pred             CCcceeeec-------------------------c-------------------------CCccccccccccccccccCC
Q psy12228        218 FDLCILVFF-------------------------H-------------------------DSTLLKTTSTIASLILRNQK  247 (258)
Q Consensus       218 fgl~~~~~~-------------------------~-------------------------~~~~~gt~~y~aPE~~~~~~  247 (258)
                      ||||.-...                         .                         ....+|||.|||||++.+..
T Consensus       285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg  364 (550)
T KOG0605|consen  285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG  364 (550)
T ss_pred             ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC
Confidence            999843110                         0                         01569999999999999999


Q ss_pred             CCcccce
Q psy12228        248 VSVLLDL  254 (258)
Q Consensus       248 ~s~~~Dv  254 (258)
                      |+..+|+
T Consensus       365 Y~~~cDw  371 (550)
T KOG0605|consen  365 YGKECDW  371 (550)
T ss_pred             CCccccH
Confidence            9999996

>KOG0592|consensus

Probab=99.97  E-value=3e-32  Score=234.52  Aligned_cols=164  Identities=18%  Similarity=0.308  Sum_probs=145.6

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      .+...||+|+|++|++|+.+     .+++.+|||++.+..  .+.-.+-+..|-.+|.+|..||.|++|+..|.++..+|
T Consensus        76 ~Fg~~lGeGSYStV~~A~~~-----~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   76 KFGKILGEGSYSTVVLAREK-----ATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             chhheeccccceeEEEeeec-----CCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            56668999999999999988     688999999996532  22223457789999999989999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +|+||+++|+|.++|++.+.                 +++...+.++.+|+.||+|||++||||||||            
T Consensus       151 FvLe~A~nGdll~~i~K~Gs-----------------fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhi  213 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYGS-----------------FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHI  213 (604)
T ss_pred             EEEEecCCCcHHHHHHHhCc-----------------chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcE
Confidence            99999999999999999987                 9999999999999999999999999999996            


Q ss_pred             -ccCCCcceeeeccC----------------CccccccccccccccccCCCCcccce
Q psy12228        215 -FIGFDLCILVFFHD----------------STLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 -i~dfgl~~~~~~~~----------------~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                       |+|||.|+.+....                .+++||..|.+||+|.+...++.+|+
T Consensus       214 kITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDi  270 (604)
T KOG0592|consen  214 KITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDL  270 (604)
T ss_pred             EEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccch
Confidence             89999998753321                35899999999999999999999996

>KOG0193|consensus

Probab=99.97  E-value=3.5e-32  Score=236.73  Aligned_cols=160  Identities=20%  Similarity=0.267  Sum_probs=139.0

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ....||+|.||+||+|+|.        -.||||+++... +++..+.|.+|+.++++- +|.||+-+.|+|..++. .||
T Consensus       396 l~~rIGsGsFGtV~Rg~wh--------GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~~-AIi  465 (678)
T KOG0193|consen  396 LGERIGSGSFGTVYRGRWH--------GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKT-RHENILLFMGACMNPPL-AII  465 (678)
T ss_pred             ccceeccccccceeecccc--------cceEEEEEecCCCCHHHHHHHHHHHHHHhhc-chhhheeeehhhcCCce-eee
Confidence            3447999999999999999        479999997543 566789999999999999 99999999999998766 999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      +.+|+|-+|+.+|+..+.                .+...+.+.|+.||++||.|||.++|||||||             |
T Consensus       466 TqwCeGsSLY~hlHv~et----------------kfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkI  529 (678)
T KOG0193|consen  466 TQWCEGSSLYTHLHVQET----------------KFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKI  529 (678)
T ss_pred             ehhccCchhhhhccchhh----------------hhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEE
Confidence            999999999999998764                38999999999999999999999999999995             8


Q ss_pred             cCCCcceeeecc-----CCcccccccccccccccc---CCCCccccee
Q psy12228        216 IGFDLCILVFFH-----DSTLLKTTSTIASLILRN---QKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~---~~~s~~~Dv~  255 (258)
                      .||||+..-..-     -....|...|||||+++.   .+|++.+||+
T Consensus       530 gDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVY  577 (678)
T KOG0193|consen  530 GDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVY  577 (678)
T ss_pred             ecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchh
Confidence            999998642211     146678899999999864   5889999986

>KOG4721|consensus

Probab=99.97  E-value=7e-33  Score=239.63  Aligned_cols=150  Identities=27%  Similarity=0.410  Sum_probs=134.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+-|.||+|++++       +.||||+++.- .       ..+|+-|++| +||||+.|.|+|....-+|||||||
T Consensus       131 WlGSGaQGAVF~Grl~n-------etVAVKKV~el-k-------ETdIKHLRkL-kH~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  131 WLGSGAQGAVFLGRLHN-------ETVAVKKVREL-K-------ETDIKHLRKL-KHPNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             hhccCcccceeeeeccC-------ceehhHHHhhh-h-------hhhHHHHHhc-cCcceeeEeeeecCCceeEEeeecc
Confidence            79999999999999874       89999988642 1       1467889999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      +.|-|...|+..+.                 ++...+..|..+||.||.|||.+.|||||||             |+|||
T Consensus       195 a~GqL~~VLka~~~-----------------itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFG  257 (904)
T KOG4721|consen  195 AQGQLYEVLKAGRP-----------------ITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFG  257 (904)
T ss_pred             ccccHHHHHhccCc-----------------cCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEecccc
Confidence            99999999998765                 9999999999999999999999999999995             89999


Q ss_pred             cceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      -++......  -.++||..|||||++++++.++|+||.
T Consensus       258 TS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIw  295 (904)
T KOG4721|consen  258 TSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIW  295 (904)
T ss_pred             chHhhhhhhhhhhhhhhHhhhCHHHhhcCCccccccee
Confidence            998654332  579999999999999999999999985

>KOG0198|consensus

Probab=99.97  E-value=2.7e-31  Score=221.92  Aligned_cols=162  Identities=22%  Similarity=0.322  Sum_probs=137.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC--cEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~--~~~lv  148 (258)
                      ...||+|+||.||++...     .++...|||.+....... .+.+.+|+.+|.++ +|||||+++|......  .++++
T Consensus        22 ~~~lG~Gs~G~V~l~~~~-----~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~~~~~~~i~   94 (313)
T KOG0198|consen   22 GKLLGRGSFGSVYLATNK-----KTGELMAVKSVELEDSPT-SESLEREIRILSRL-NHPNIVQYYGSSSSRENDEYNIF   94 (313)
T ss_pred             hccccCccceEEEEEEec-----CCCcceeeeeeecccchh-HHHHHHHHHHHHhC-CCCCEEeeCCccccccCeeeEee
Confidence            348999999999999987     568899999997653333 67789999999999 7999999999855544  69999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------  214 (258)
                      |||+++|+|.+++.+.+.                .++++.++.+..||+.||.|||++||||||||              
T Consensus        95 mEy~~~GsL~~~~~~~g~----------------~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~K  158 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKRYGG----------------KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVK  158 (313)
T ss_pred             eeccCCCcHHHHHHHcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEE
Confidence            999999999999998762                29999999999999999999999999999996              


Q ss_pred             ccCCCcceeeec------cCCccccccccccccccccCCC-Cccccee
Q psy12228        215 FIGFDLCILVFF------HDSTLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~------~~~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                      |+|||+++....      ......||+.|||||++.++.. ..++||-
T Consensus       159 laDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiW  206 (313)
T KOG0198|consen  159 LADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIW  206 (313)
T ss_pred             eccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhh
Confidence            789999986552      1246899999999999996333 3589974

>KOG0196|consensus

Probab=99.97  E-value=4.5e-32  Score=241.56  Aligned_cols=166  Identities=28%  Similarity=0.351  Sum_probs=147.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +.+||.|.||+|++|+++-  ..+....||||.++...+++++.+|+.|+.+|.++ .||||++|.|+......+.||+|
T Consensus       634 e~VIGaGEFGEVc~GrLk~--pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvMIiTE  710 (996)
T KOG0196|consen  634 EKVIGAGEFGEVCSGRLKL--PGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVMIITE  710 (996)
T ss_pred             EEEEecccccceecccccC--CCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeEEEhh
Confidence            4489999999999999873  22455889999999998999999999999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~d  217 (258)
                      ||++|+|+.||+.+..                .+++.++..+.++|+.||.||.++|+|||||             |++|
T Consensus       711 yMENGsLDsFLR~~DG----------------qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsD  774 (996)
T KOG0196|consen  711 YMENGSLDSFLRQNDG----------------QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSD  774 (996)
T ss_pred             hhhCCcHHHHHhhcCC----------------ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEecc
Confidence            9999999999998764                2999999999999999999999999999999             8999


Q ss_pred             CCcceeeeccC----Cccccc--cccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD----STLLKT--TSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~----~~~~gt--~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.+....    .+..|.  .+|.|||.+...+++.+|||-
T Consensus       775 FGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVW  818 (996)
T KOG0196|consen  775 FGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVW  818 (996)
T ss_pred             ccceeecccCCCccccccCCccceeecChhHhhhcccCchhhcc
Confidence            99999764443    222232  689999999999999999973

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=4.8e-31  Score=225.73  Aligned_cols=160  Identities=21%  Similarity=0.268  Sum_probs=140.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||++...     .++..||+|+++...  .......+.+|+.+++.+ +||||+++++++...+.+++|||
T Consensus         2 ~lG~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           2 LLGKGTFGKVILVREK-----ATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVME   75 (323)
T ss_pred             eeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEe
Confidence            6899999999999987     578899999997532  233456788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                 +++..+..++.||+.||+|||++||+|||||             ++|
T Consensus        76 ~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~D  138 (323)
T cd05571          76 YANGGELFFHLSRERV-----------------FSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITD  138 (323)
T ss_pred             CCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEee
Confidence            9999999999987655                 8999999999999999999999999999996             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....   .....||+.|+|||++.+..++.++||.
T Consensus       139 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  179 (323)
T cd05571         139 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW  179 (323)
T ss_pred             CCCCcccccCCCcccceecCccccChhhhcCCCCCccccCc
Confidence            9998753222   2456799999999999999999999985

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0580|consensus

Probab=99.97  E-value=3.5e-32  Score=212.94  Aligned_cols=164  Identities=23%  Similarity=0.331  Sum_probs=143.9

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      +..||+|.||.||.|+.+     .+.-.||+|++.+..  ......++.+|+++-+.| +||||+++|++|.+...+||+
T Consensus        27 gr~LgkgkFG~vYlarek-----ks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   27 GRPLGKGKFGNVYLAREK-----KSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             cccccCCccccEeEeeec-----cCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhheeccceeEEE
Confidence            448999999999999988     678899999996432  122235688999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      +||.++|+|...|...+.               ..+++.....++.|+|.||.|+|.++|||||||             +
T Consensus       101 lEya~~gel~k~L~~~~~---------------~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lki  165 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRM---------------KRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKI  165 (281)
T ss_pred             EEecCCchHHHHHHhccc---------------ccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeec
Confidence            999999999999996543               348999999999999999999999999999995             8


Q ss_pred             cCCCcceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||-+...... ..+.+||..|.|||+..+..++..+|+-
T Consensus       166 AdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w  206 (281)
T KOG0580|consen  166 ADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLW  206 (281)
T ss_pred             cCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHH
Confidence            999998876433 3789999999999999999999999974

>KOG0663|consensus

Probab=99.97  E-value=8.1e-32  Score=219.99  Aligned_cols=161  Identities=17%  Similarity=0.238  Sum_probs=137.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHH-HHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv  148 (258)
                      +.|++|+||.||+|+.+     .++..||+|.++....... .-.-++|+.+|.++ +|||||.+..+....  +.++||
T Consensus        82 nrI~EGtyGiVYRakdk-----~t~eIVALKr~kmekek~GFPItsLREIniLl~~-~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   82 NRIEEGTYGVVYRAKDK-----KTDEIVALKRLKMEKEKEGFPITSLREINILLKA-RHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             hhcccCcceeEEEeccC-----CcceeEEeeecccccccCCCcchhHHHHHHHHhc-CCCCeeeeEEEEeccccceeeee
Confidence            37999999999999998     7889999999986532211 12357999999999 899999999988753  469999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      ||||++ ||...|..-..                ++...++..++.|+++|++|||.+.|+|||||             +
T Consensus       156 Me~~Eh-DLksl~d~m~q----------------~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKi  218 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETMKQ----------------PFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKI  218 (419)
T ss_pred             HHHHHh-hHHHHHHhccC----------------CCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEe
Confidence            999998 99999988652                49999999999999999999999999999995             8


Q ss_pred             cCCCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        216 IGFDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      +|||+|+.+....   ...+-|.+|.|||.+.+ ..|++++|+-
T Consensus       219 aDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMW  262 (419)
T KOG0663|consen  219 ADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMW  262 (419)
T ss_pred             cccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhh
Confidence            9999999876663   46678999999999887 6789999963

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=6.8e-31  Score=225.36  Aligned_cols=161  Identities=19%  Similarity=0.252  Sum_probs=143.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|+++...  .....+.+.+|+.+++.+ +||||+++++++.+++..++||
T Consensus        24 ~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         24 ETLGTGSFGRVRIAKHK-----GTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             EEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEEEEE
Confidence            38999999999999987     577899999996431  223456789999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             ++
T Consensus        98 e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~  160 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGR-----------------FPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVT  160 (329)
T ss_pred             cCCCCChHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEe
Confidence            99999999999987655                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++..........||+.|+|||++.+..++.++||.
T Consensus       161 Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  199 (329)
T PTZ00263        161 DFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWW  199 (329)
T ss_pred             eccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceee
Confidence            999998765555677899999999999999999999985

>KOG1094|consensus

Probab=99.97  E-value=7.3e-32  Score=233.76  Aligned_cols=162  Identities=27%  Similarity=0.386  Sum_probs=142.9

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..+||+|.||.|.+|+..      .+..||||.++.......+.+|.+|+++|.++ +|||||+++|+|..++.+++|+|
T Consensus       543 ~ekiGeGqFGEVhLCeve------g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicmI~E  615 (807)
T KOG1094|consen  543 KEKIGEGQFGEVHLCEVE------GPLKVAVKILRPDATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCMITE  615 (807)
T ss_pred             hhhhcCcccceeEEEEec------CceEEEEeecCcccchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHHHHH
Confidence            347999999999999986      35899999999987888889999999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~d  217 (258)
                      ||++|+|.+||..+...               .+.......|+.||++||+||.+.++|||||             ||+|
T Consensus       616 YmEnGDLnqFl~aheap---------------t~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiad  680 (807)
T KOG1094|consen  616 YMENGDLNQFLSAHELP---------------TAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIAD  680 (807)
T ss_pred             HHhcCcHHHHHHhccCc---------------ccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecC
Confidence            99999999999998641               1345566779999999999999999999998             8999


Q ss_pred             CCcceeeeccCCc-----cccccccccccccccCCCCcccce
Q psy12228        218 FDLCILVFFHDST-----LLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       218 fgl~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      ||+++.+..++..     .+-..+|||||.+..++++++|||
T Consensus       681 fgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDv  722 (807)
T KOG1094|consen  681 FGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDV  722 (807)
T ss_pred             cccccccccCCceeeecceeeeeeehhHHHHHhccccchhhh
Confidence            9999976666532     233479999999999999999997

>KOG4236|consensus

Probab=99.97  E-value=3e-31  Score=227.90  Aligned_cols=164  Identities=18%  Similarity=0.245  Sum_probs=144.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      +.+||+|.||.||.|..+     .+|+.||||+|.+.. ..+....+.+|+.+|+++ +||.||.+...|++.+.+++||
T Consensus       569 devLGSGQFG~VYgg~hR-----ktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-~HPGiV~le~M~ET~ervFVVM  642 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHR-----KTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-HHPGIVNLECMFETPERVFVVM  642 (888)
T ss_pred             HhhccCCcceeeecceec-----ccCceeeeeeeecccCCCchHHHHHHHHHHHHhc-CCCCeeEEEEeecCCceEEEEe
Confidence            348999999999999998     799999999996533 444557899999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------  214 (258)
                      |-+.| ++.+.|.....               ..+++..-..+..||+.||.|||.+||+|+|||               
T Consensus       643 EKl~G-DMLEMILSsEk---------------gRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQv  706 (888)
T KOG4236|consen  643 EKLHG-DMLEMILSSEK---------------GRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQV  706 (888)
T ss_pred             hhhcc-hHHHHHHHhhc---------------ccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCce
Confidence            99975 88887776543               348999999999999999999999999999995               


Q ss_pred             -ccCCCcceeeeccC--CccccccccccccccccCCCCcccceeE
Q psy12228        215 -FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       215 -i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                       ++|||+|+......  .+++|||.|+|||+++++.|+.+-|+-.
T Consensus       707 KlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWS  751 (888)
T KOG4236|consen  707 KLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWS  751 (888)
T ss_pred             eeccccceeecchhhhhhhhcCCccccCHHHHhhcccccccccee
Confidence             89999999877665  5889999999999999999999988543

>KOG0589|consensus

Probab=99.97  E-value=1.8e-31  Score=228.91  Aligned_cols=161  Identities=19%  Similarity=0.330  Sum_probs=145.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc-EEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP-LYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~-~~lv~e  150 (258)
                      ++|+|+||.++.++.+     .+...+++|.+.-.. ++..+.....|+.+++++ +|||||.+++.|..++. ++|||+
T Consensus        11 ~iG~GafG~a~lvrhk-----~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l~Ivm~   84 (426)
T KOG0589|consen   11 QVGRGAFGSALLVRHK-----SDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLLCIVME   84 (426)
T ss_pred             hcCccccchhhhhhhc-----cCCceEEEEEEeccccCchhhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceEEEEEe
Confidence            7999999999999988     567899999997443 555666889999999999 99999999999999887 999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||+||+|.+.|.+.+.               ..++++++..|+.|++.|+.|||+++|+|||||             +.|
T Consensus        85 Y~eGg~l~~~i~~~k~---------------~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgD  149 (426)
T KOG0589|consen   85 YCEGGDLAQLIKEQKG---------------VLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGD  149 (426)
T ss_pred             ecCCCCHHHHHHHHhh---------------ccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecc
Confidence            9999999999998763               449999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCCCCcccce
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      ||+|+......   .+.+||+.||.||.+.+.+|+.|+||
T Consensus       150 fGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDi  189 (426)
T KOG0589|consen  150 FGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDI  189 (426)
T ss_pred             hhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcc
Confidence            99999876654   68999999999999999999999997

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1e-30  Score=222.57  Aligned_cols=160  Identities=19%  Similarity=0.244  Sum_probs=139.4

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ||+|+||.||+|...     .++..||+|+++...  .......+.+|+.++..+ +||||+++++++.+.+..++||||
T Consensus         1 lg~G~~g~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~   74 (312)
T cd05585           1 IGKGSFGKVMQVRKR-----DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAF   74 (312)
T ss_pred             CCcCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcC
Confidence            689999999999987     577899999996421  334456788999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             ++||
T Consensus        75 ~~~g~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Df  137 (312)
T cd05585          75 INGGELFHHLQREGR-----------------FDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDF  137 (312)
T ss_pred             CCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEEC
Confidence            999999999987654                 8999999999999999999999999999996             7899


Q ss_pred             Ccceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       138 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws  178 (312)
T cd05585         138 GLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWT  178 (312)
T ss_pred             cccccCccCCCccccccCCcccCCHHHHcCCCCCCccceec
Confidence            998753222   23567999999999999999999999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=1.5e-30  Score=224.11  Aligned_cols=163  Identities=25%  Similarity=0.300  Sum_probs=141.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...+    ..+..||+|++....  .....+.+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus        36 ~~ig~G~~g~Vy~a~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~  110 (340)
T PTZ00426         36 RTLGTGSFGRVILATYKN----EDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYLYLVL  110 (340)
T ss_pred             EEEeecCCeEEEEEEEEC----CCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEEEEEE
Confidence            389999999999998762    233689999986421  233456788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.|++.||.|||+++|+|||||             ++
T Consensus       111 Ey~~~g~L~~~i~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~  173 (340)
T PTZ00426        111 EFVIGGEFFTFLRRNKR-----------------FPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMT  173 (340)
T ss_pred             eCCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEe
Confidence            99999999999987655                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccCCccccccccccccccccCCCCcccceeE
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |||++...........||+.|+|||++.+..++.++||..
T Consensus       174 DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  213 (340)
T PTZ00426        174 DFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWT  213 (340)
T ss_pred             cCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccc
Confidence            9999987655556778999999999999989999999853

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.8e-31  Score=221.59  Aligned_cols=161  Identities=18%  Similarity=0.241  Sum_probs=142.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .+++.||+|++....  .....+.+.+|+.+++.+ +||||+++++++.+++.+++||
T Consensus         7 ~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           7 KTVGTGTFGRVHLVRDR-----ISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             eeeecCCCeEEEEEEEc-----CCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEEE
Confidence            48999999999999987     577899999996432  223456788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++...+.                 +++..+..++.|++.||.|||++||+|||||             ++
T Consensus        81 e~~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~  143 (291)
T cd05612          81 EYVPGGELFSYLRNSGR-----------------FSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLT  143 (291)
T ss_pred             eCCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEE
Confidence            99999999999987655                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++..........||+.|+|||++.+..++.++||.
T Consensus       144 Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  182 (291)
T cd05612         144 DFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWW  182 (291)
T ss_pred             ecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHH
Confidence            999998765555567899999999999999999999984

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0594|consensus

Probab=99.97  E-value=4.7e-31  Score=217.76  Aligned_cols=162  Identities=20%  Similarity=0.267  Sum_probs=139.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCc-ccceeeeEEcCC------c
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHIN-IINLLGVCTQDG------P  144 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~n-Iv~l~~~~~~~~------~  144 (258)
                      +||+|+||.||+|+.+     .++..||+|+++.... +.......+|+.+++.+ +|+| ||.+++++.+.+      .
T Consensus        18 klGeGtyg~Vykar~~-----~~g~~VALKkirl~~~~EG~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   18 KLGEGTYGVVYKARSK-----RTGKFVALKKIRLEFEEEGVPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HhCCCCceEEEEEEEe-----cCCCEEEEEEEeccccccCCCchhhHHHHHHHHh-CCCcceEEEEeeeeecccccccce
Confidence            6999999999999998     6889999999976533 22335578999999999 9999 999999999877      7


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +++|+||+.. +|..++......             ...++...+..++.||+.||+|||+++|+|||||          
T Consensus        92 l~lvfe~~d~-DL~~ymd~~~~~-------------~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G  157 (323)
T KOG0594|consen   92 LYLVFEFLDR-DLKKYMDSLPKK-------------PQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSG  157 (323)
T ss_pred             EEEEEEeecc-cHHHHHHhcccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCC
Confidence            9999999987 999999987631             0237778999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccC---CccccccccccccccccC-CCCcccce
Q psy12228        215 ---FIGFDLCILVFFHD---STLLKTTSTIASLILRNQ-KVSVLLDL  254 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~s~~~Dv  254 (258)
                         ++|||+|+....+.   ...++|.+|.|||++.+. .|++.+||
T Consensus       158 ~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDi  204 (323)
T KOG0594|consen  158 VLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDI  204 (323)
T ss_pred             cEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcch
Confidence               89999999765443   467889999999999886 78999996

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=1.4e-30  Score=222.84  Aligned_cols=160  Identities=23%  Similarity=0.303  Sum_probs=139.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||++...     .++..||+|+++...  .......+.+|+.+++.+ +||||+++++++...+..++|||
T Consensus         2 ~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           2 LLGKGTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVME   75 (323)
T ss_pred             eeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEe
Confidence            6899999999999987     578899999997532  233456788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|..++.....                 +++..++.++.||+.||.|||++||+|||||             ++|
T Consensus        76 ~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~D  138 (323)
T cd05595          76 YANGGELFFHLSRERV-----------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD  138 (323)
T ss_pred             CCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecc
Confidence            9999999999887654                 8999999999999999999999999999996             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......   ....||+.|+|||++.+..++.++||.
T Consensus       139 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  179 (323)
T cd05595         139 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW  179 (323)
T ss_pred             cHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchh
Confidence            99987532222   356799999999999999999999985

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=1.3e-30  Score=226.51  Aligned_cols=161  Identities=18%  Similarity=0.258  Sum_probs=139.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..||+|+++...  .......+.+|+.++..+ +|+||+++++.+.+...+++||
T Consensus         7 ~~LG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           7 KVIGRGAFGEVRLVQKK-----DTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             EEEEeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEEE
Confidence            38999999999999987     577899999996431  223346788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.|++.||+|||++||+|||||             ++
T Consensus        81 E~~~gg~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~  143 (363)
T cd05628          81 EFLPGGDMMTLLMKKDT-----------------LTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLS  143 (363)
T ss_pred             cCCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEe
Confidence            99999999999987655                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc--------------------------------------CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH--------------------------------------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~--------------------------------------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....                                      ....+||+.|+|||++.+..++.++||-
T Consensus       144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~Dvw  220 (363)
T cd05628         144 DFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWW  220 (363)
T ss_pred             eccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhh
Confidence            99998743211                                      0235799999999999999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.2e-30  Score=222.44  Aligned_cols=162  Identities=17%  Similarity=0.252  Sum_probs=143.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|+++...  .......+.+|+.++..+ +||||+++++++.+.+..++||
T Consensus         7 ~~ig~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           7 TQVGQGGYGQVFLAKKK-----DTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             EEEeecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEEEE
Confidence            38999999999999987     567899999997532  223456788999999999 8999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             ++
T Consensus        81 e~~~g~~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~  143 (333)
T cd05600          81 EYVPGGDFRTLLNNLGV-----------------LSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLT  143 (333)
T ss_pred             eCCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEE
Confidence            99999999999987654                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccCCccccccccccccccccCCCCcccceeE
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |||++...........||+.|+|||++.+..++.++||..
T Consensus       144 Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws  183 (333)
T cd05600         144 DFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWS  183 (333)
T ss_pred             eCcCCcccccccCCcccCccccChhHhcCCCCCCccceec
Confidence            9999986655556778999999999999999999999854

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=2.4e-30  Score=221.94  Aligned_cols=161  Identities=21%  Similarity=0.267  Sum_probs=140.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||++...     .++..||+|+++...  .......+.+|+.+++.+ +||||+++++++...+..++|||
T Consensus         2 ~lG~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           2 LLGKGTFGKVILVREK-----ASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             eeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEe
Confidence            6899999999999987     578999999997532  234456788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|..++.....                 +++..+..++.||+.||+|||+++|+|||||             ++|
T Consensus        76 y~~~g~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~D  138 (328)
T cd05593          76 YVNGGELFFHLSRERV-----------------FSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITD  138 (328)
T ss_pred             CCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEec
Confidence            9999999999887654                 8999999999999999999999999999996             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      ||+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       139 fG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  180 (328)
T cd05593         139 FGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG  180 (328)
T ss_pred             CcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccc
Confidence            9998753222   13567999999999999999999999853

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=2.2e-30  Score=226.51  Aligned_cols=161  Identities=16%  Similarity=0.225  Sum_probs=139.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .++..||+|++....  .......+.+|+.+++.+ +||||+++++++.+.+.+++|||
T Consensus         8 ~LG~G~~g~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           8 TLGIGAFGEVCLACKV-----DTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             EEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEEe
Confidence            7999999999999987     578899999996532  234456789999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||             ++|
T Consensus        82 ~~~gg~L~~~l~~~~~-----------------~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~D  144 (381)
T cd05626          82 YIPGGDMMSLLIRMEV-----------------FPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTD  144 (381)
T ss_pred             cCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEee
Confidence            9999999999987654                 8999999999999999999999999999996             789


Q ss_pred             CCcceeeecc--------------------------------------------------CCccccccccccccccccCC
Q psy12228        218 FDLCILVFFH--------------------------------------------------DSTLLKTTSTIASLILRNQK  247 (258)
Q Consensus       218 fgl~~~~~~~--------------------------------------------------~~~~~gt~~y~aPE~~~~~~  247 (258)
                      ||+++.....                                                  ....+||+.|+|||++.+..
T Consensus       145 FGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~  224 (381)
T cd05626         145 FGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG  224 (381)
T ss_pred             CcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC
Confidence            9987532100                                                  01357999999999999999


Q ss_pred             CCcccceeE
Q psy12228        248 VSVLLDLIF  256 (258)
Q Consensus       248 ~s~~~Dv~~  256 (258)
                      ++.++||-.
T Consensus       225 ~~~~~DiwS  233 (381)
T cd05626         225 YTQLCDWWS  233 (381)
T ss_pred             CCCccceee
Confidence            999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.97  E-value=1.9e-30  Score=223.21  Aligned_cols=183  Identities=37%  Similarity=0.497  Sum_probs=140.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-cEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-PLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-~~~lv~e~  151 (258)
                      +||+|+||.||+|...+.....++..||||+++..........+.+|+.++..+.+||||++++++|...+ .++++|||
T Consensus        14 ~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey   93 (338)
T cd05102          14 VLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEF   93 (338)
T ss_pred             EeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEec
Confidence            89999999999998753333345678999999865455566789999999999988999999999987644 68999999


Q ss_pred             CCCCCHHHHHhhcCCCCCC-------------------------------------CCCCC--------CCCCCCCCCCH
Q psy12228        152 APHGNLRDFLRKHRPSSGY-------------------------------------ESPLG--------SAYTNGNVLTE  186 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~-------------------------------------~~~~~--------~~~~~~~~l~~  186 (258)
                      +++|+|.+++.........                                     ....+        ........+++
T Consensus        94 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  173 (338)
T cd05102          94 CKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTM  173 (338)
T ss_pred             CCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCH
Confidence            9999999999864320000                                     00000        00001345889


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCcceeeeccC-----CccccccccccccccccCCC
Q psy12228        187 KDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKV  248 (258)
Q Consensus       187 ~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~  248 (258)
                      ..+..++.||+.||.|||+++|+|||||             ++|||+++......     ....+++.|+|||++.+..+
T Consensus       174 ~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  253 (338)
T cd05102         174 EDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVY  253 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCC
Confidence            9999999999999999999999999996             68999997543221     23445678999999999999


Q ss_pred             Cccccee
Q psy12228        249 SVLLDLI  255 (258)
Q Consensus       249 s~~~Dv~  255 (258)
                      +.++||.
T Consensus       254 ~~~sDiw  260 (338)
T cd05102         254 TTQSDVW  260 (338)
T ss_pred             CcccCHH
Confidence            9999984

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0582|consensus

Probab=99.97  E-value=1.7e-30  Score=219.21  Aligned_cols=163  Identities=21%  Similarity=0.286  Sum_probs=144.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||.|..+.||+|...     .++..||||++.-+....+.+.+.+|+..|+.+ +||||++++..|..+..+|+||.||
T Consensus        33 ~IG~G~sa~V~~A~c~-----p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWvVmpfM  106 (516)
T KOG0582|consen   33 VIGVGASAVVYLARCI-----PTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWVVMPFM  106 (516)
T ss_pred             EEeccceeEeeeeeec-----ccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEEeehhh
Confidence            8999999999999998     577999999998766666688999999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      .+|++.+.++..-.               ..+.+..+..|.+++++||.|||.+|.||||||             ++|||
T Consensus       107 a~GS~ldIik~~~~---------------~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFg  171 (516)
T KOG0582|consen  107 AGGSLLDIIKTYYP---------------DGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFG  171 (516)
T ss_pred             cCCcHHHHHHHHcc---------------ccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCce
Confidence            99999999998765               349999999999999999999999999999996             78998


Q ss_pred             cceeeeccC-------Ccccccccccccccccc--CCCCcccceeE
Q psy12228        220 LCILVFFHD-------STLLKTTSTIASLILRN--QKVSVLLDLIF  256 (258)
Q Consensus       220 l~~~~~~~~-------~~~~gt~~y~aPE~~~~--~~~s~~~Dv~~  256 (258)
                      .+..+..+.       .+.+||++|||||++..  ..|+.|+||..
T Consensus       172 vsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwS  217 (516)
T KOG0582|consen  172 VSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWS  217 (516)
T ss_pred             eeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhh
Confidence            776543331       56799999999999543  68999999853

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=2.9e-30  Score=221.45  Aligned_cols=162  Identities=19%  Similarity=0.312  Sum_probs=140.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||.||++...     .++..||+|+++...  .......+..|..++..+.+||||+++++++.+.+.+++|||
T Consensus         2 ~lG~G~~g~V~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e   76 (329)
T cd05588           2 VIGRGSYAKVLLVELK-----KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIE   76 (329)
T ss_pred             eEeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEe
Confidence            6899999999999987     577899999997532  233456688999999998779999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++...+.                 +++..+..++.||+.||.|||++||+|||||             ++|
T Consensus        77 ~~~~g~L~~~~~~~~~-----------------l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~D  139 (329)
T cd05588          77 FVSGGDLMFHMQRQRK-----------------LPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTD  139 (329)
T ss_pred             CCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECc
Confidence            9999999999877654                 9999999999999999999999999999995             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      ||+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  181 (329)
T cd05588         140 YGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWA  181 (329)
T ss_pred             CccccccccCCCccccccCCccccCHHHHcCCCCCCccceec
Confidence            9998753221   24568999999999999999999999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0201|consensus

Probab=99.97  E-value=2.9e-32  Score=229.41  Aligned_cols=160  Identities=21%  Similarity=0.319  Sum_probs=146.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .+++.||+|++.-+....+.+++..|+.++.++ +++||.++||.+..+..++++||||
T Consensus        20 ~IgrGsfG~Vyk~~d~-----~t~k~vAiKii~Le~~~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   20 LIGRGSFGEVYKAIDN-----KTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             hccccccceeeeeeec-----cccceEEEEEechhhcchhhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHHHHHHh
Confidence            8999999999999998     788999999998777777788999999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      .+|++.+.|+....                 +.+..+..++++++.||.|||+++.+|||||             ++|||
T Consensus        94 ~gGsv~~lL~~~~~-----------------~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~Dfg  156 (467)
T KOG0201|consen   94 GGGSVLDLLKSGNI-----------------LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFG  156 (467)
T ss_pred             cCcchhhhhccCCC-----------------CccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecc
Confidence            99999999987654                 6888999999999999999999999999996             78999


Q ss_pred             cceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      .+......   ..+++||+.|||||++....|+.|+||-
T Consensus       157 Va~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIW  195 (467)
T KOG0201|consen  157 VAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIW  195 (467)
T ss_pred             eeeeeechhhccccccccccccchhhhccccccchhhhh
Confidence            98865443   3789999999999999999999999973

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.6e-30  Score=224.57  Aligned_cols=162  Identities=17%  Similarity=0.223  Sum_probs=139.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||||+++...  .......+.+|+.++..+ +||||+++++++.+++.+++||
T Consensus         7 ~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           7 KVIGRGAFGEVRLVQKK-----DTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             EEEEecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEEE
Confidence            48999999999999987     577899999997431  223446688999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||+|||+++|+|||||             ++
T Consensus        81 E~~~~g~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~  143 (364)
T cd05599          81 EYLPGGDMMTLLMKKDT-----------------FTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLS  143 (364)
T ss_pred             CCCCCcHHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEe
Confidence            99999999999987654                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC-----------------------------------------CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD-----------------------------------------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-----------------------------------------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......                                         ...+||+.|+|||++.+..++.++||.
T Consensus       144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  223 (364)
T cd05599         144 DFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWW  223 (364)
T ss_pred             ecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeee
Confidence            999987532110                                         124699999999999999999999985


Q ss_pred             E
Q psy12228        256 F  256 (258)
Q Consensus       256 ~  256 (258)
                      .
T Consensus       224 S  224 (364)
T cd05599         224 S  224 (364)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3e-30  Score=225.34  Aligned_cols=162  Identities=19%  Similarity=0.177  Sum_probs=138.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..||||++....  .....+.+.+|+.+++.+ +||||+++++++.+++..++||
T Consensus         7 ~~lG~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           7 KVIGKGAFGEVRLVQKK-----DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             EEEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEEE
Confidence            48999999999999987     578899999986421  233456788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..++.++.|++.||+|||++||+|||||             ++
T Consensus        81 E~~~gg~L~~~l~~~~~-----------------~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~  143 (377)
T cd05629          81 EFLPGGDLMTMLIKYDT-----------------FSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLS  143 (377)
T ss_pred             eCCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEe
Confidence            99999999999987654                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc--------------------------------------------------CCccccccccccccccccC
Q psy12228        217 GFDLCILVFFH--------------------------------------------------DSTLLKTTSTIASLILRNQ  246 (258)
Q Consensus       217 dfgl~~~~~~~--------------------------------------------------~~~~~gt~~y~aPE~~~~~  246 (258)
                      |||+++.....                                                  ....+||+.|+|||++.+.
T Consensus       144 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  223 (377)
T cd05629         144 DFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ  223 (377)
T ss_pred             ecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC
Confidence            99998632110                                                  0124699999999999999


Q ss_pred             CCCcccceeE
Q psy12228        247 KVSVLLDLIF  256 (258)
Q Consensus       247 ~~s~~~Dv~~  256 (258)
                      .++.++||-.
T Consensus       224 ~~~~~~DiwS  233 (377)
T cd05629         224 GYGQECDWWS  233 (377)
T ss_pred             CCCCceeeEe
Confidence            9999999853

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=3.4e-30  Score=219.82  Aligned_cols=161  Identities=23%  Similarity=0.314  Sum_probs=137.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||.||+|...     .++..||+|+++...  .....+.+..|..++..+.+||||+++++++..++..++|||
T Consensus         2 ~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e   76 (316)
T cd05592           2 VLGKGSFGKVMLAELK-----GTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVME   76 (316)
T ss_pred             eeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEc
Confidence            6899999999999987     577899999997532  223345567777777765589999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|..++.....                 +++..+..++.||+.||.|||+++|+|||||             ++|
T Consensus        77 ~~~gg~L~~~~~~~~~-----------------~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~D  139 (316)
T cd05592          77 YLNGGDLMFHIQSSGR-----------------FDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIAD  139 (316)
T ss_pred             CCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEcc
Confidence            9999999999987654                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....   .....||+.|+|||++.+..++.++||.
T Consensus       140 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvw  180 (316)
T cd05592         140 FGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWW  180 (316)
T ss_pred             CcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccch
Confidence            9999854322   2456799999999999999999999985

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0032|consensus

Probab=99.97  E-value=2.8e-30  Score=223.22  Aligned_cols=161  Identities=20%  Similarity=0.290  Sum_probs=144.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|.||.||++..+     .++..+|+|.+.+...  ....+.+.+|+.+|+.+..|||||.+++.|.+...+++||
T Consensus        41 ~~lG~G~Fg~v~~~~~~-----~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvm  115 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREK-----STGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVM  115 (382)
T ss_pred             hhhCCCCceEEEEEEec-----CCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEE
Confidence            38999999999999998     6789999999976532  2345789999999999944999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------  214 (258)
                      |+|.||.|.+.+... .                 +++.++..++.|++.++.|||+.||+|||||               
T Consensus       116 EL~~GGeLfd~i~~~-~-----------------~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~  177 (382)
T KOG0032|consen  116 ELCEGGELFDRIVKK-H-----------------YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGR  177 (382)
T ss_pred             EecCCchHHHHHHHc-c-----------------CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCc
Confidence            999999999999876 3                 8999999999999999999999999999996               


Q ss_pred             --ccCCCcceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        ++|||++......  ....+||+.|+|||++....|+..+||-
T Consensus       178 ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiW  222 (382)
T KOG0032|consen  178 IKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVW  222 (382)
T ss_pred             EEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchh
Confidence              7899999987763  3689999999999999999999999974

>KOG0658|consensus

Probab=99.97  E-value=4.3e-31  Score=218.19  Aligned_cols=160  Identities=18%  Similarity=0.277  Sum_probs=133.7

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-----cE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-----PL  145 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-----~~  145 (258)
                      ..++|.|+||.||.|...     .++..||||..-.+..-.     -+|+.+|+.+ .|||||++..+|....     ..
T Consensus        29 ~~liG~GsFg~Vyq~~~~-----e~~~~vAIKKv~~d~r~k-----nrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~l   97 (364)
T KOG0658|consen   29 VRLIGSGSFGVVYQAKLR-----ETEEEVAIKKVLQDKRYK-----NRELQIMRKL-DHPNIVRLLYFFSSSTESDEVYL   97 (364)
T ss_pred             eEEEeecccceEEEEEEc-----CCCceeEEEEecCCCCcC-----cHHHHHHHhc-CCcCeeeEEEEEEecCCCchhHH
Confidence            448999999999999998     567999999986543222     2799999999 9999999998886422     35


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      .+||||+|. +|.++++....             .+..++.-.+..++.||.+||.|||+.||+|||||           
T Consensus        98 nlVleymP~-tL~~~~r~~~~-------------~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg  163 (364)
T KOG0658|consen   98 NLVLEYMPE-TLYRVIRHYTR-------------ANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTG  163 (364)
T ss_pred             HHHHHhchH-HHHHHHHHHhh-------------cCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCC
Confidence            689999998 99999996421             12348999999999999999999999999999995           


Q ss_pred             ---ccCCCcceeeeccC--Ccccccccccccccccc-CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD--STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                         |||||.|+....+.  .++.-|..|.|||.+.| ..|+.+.||=
T Consensus       164 ~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiW  210 (364)
T KOG0658|consen  164 VLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIW  210 (364)
T ss_pred             eEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEh
Confidence               89999999876554  57788899999999887 5789999973

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=9.2e-30  Score=214.00  Aligned_cols=163  Identities=15%  Similarity=0.190  Sum_probs=139.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|.+....  .......+.+|+.+++.+ +|+||+.+++++.+++..++||
T Consensus         6 ~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05631           6 RVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             EEEecCCCEEEEEEEEe-----cCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEE
Confidence            37999999999999987     578999999986432  122335688999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....               ..+++..+..++.|++.||.|||+++|+|||||             ++
T Consensus        80 e~~~~g~L~~~~~~~~~---------------~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~  144 (285)
T cd05631          80 TIMNGGDLKFHIYNMGN---------------PGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRIS  144 (285)
T ss_pred             EecCCCcHHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEe
Confidence            99999999988875432               238999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......  ....||+.|+|||++.+..++.++||.
T Consensus       145 Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvw  185 (285)
T cd05631         145 DLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWW  185 (285)
T ss_pred             eCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCch
Confidence            999998643322  356789999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=4.9e-30  Score=223.86  Aligned_cols=162  Identities=15%  Similarity=0.211  Sum_probs=138.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..||+|++....  .......+.+|+.+++.+ +|+||+++++.+.+++.+++||
T Consensus         7 ~~lG~G~~g~V~~a~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           7 KTIGIGAFGEVCLVRKV-----DTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             EEEEeCCCeEEEEEEEC-----CCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEEE
Confidence            37999999999999987     578999999996421  122346688999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++...+.                 +++..+..++.||+.||+|||+++|+|||||             ++
T Consensus        81 E~~~~g~L~~~i~~~~~-----------------~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~  143 (376)
T cd05598          81 DYIPGGDMMSLLIRLGI-----------------FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLT  143 (376)
T ss_pred             eCCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEE
Confidence            99999999999987654                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc----------------------------------------------CCccccccccccccccccCCCCc
Q psy12228        217 GFDLCILVFFH----------------------------------------------DSTLLKTTSTIASLILRNQKVSV  250 (258)
Q Consensus       217 dfgl~~~~~~~----------------------------------------------~~~~~gt~~y~aPE~~~~~~~s~  250 (258)
                      |||++......                                              .....||+.|+|||++.+..++.
T Consensus       144 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  223 (376)
T cd05598         144 DFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ  223 (376)
T ss_pred             eCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCc
Confidence            99997522100                                              01357999999999999999999


Q ss_pred             ccceeE
Q psy12228        251 LLDLIF  256 (258)
Q Consensus       251 ~~Dv~~  256 (258)
                      ++||..
T Consensus       224 ~~DiwS  229 (376)
T cd05598         224 LCDWWS  229 (376)
T ss_pred             ceeeee
Confidence            999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=4.7e-30  Score=219.37  Aligned_cols=162  Identities=22%  Similarity=0.308  Sum_probs=139.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||.||+|...     .++..||+|+++...  .......+..|.+++..+.+||||+++++++.+.+..++|||
T Consensus         2 ~lG~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E   76 (321)
T cd05591           2 VLGKGSFGKVMLAELK-----GTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVME   76 (321)
T ss_pred             ccccCCCeEEEEEEEC-----CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEe
Confidence            6899999999999987     577899999997532  233456678899999877689999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|..++.....                 +++..+..++.||+.||.|||+++|+|||||             ++|
T Consensus        77 ~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~D  139 (321)
T cd05591          77 YVNGGDLMFQIQRSRK-----------------FDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLAD  139 (321)
T ss_pred             CCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEee
Confidence            9999999999987655                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      ||++......   .....||+.|+|||++.+..++.++||..
T Consensus       140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws  181 (321)
T cd05591         140 FGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWA  181 (321)
T ss_pred             cccceecccCCccccccccCccccCHHHHcCCCCCCccceec
Confidence            9998754322   24567899999999999999999999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=8.9e-30  Score=218.48  Aligned_cols=162  Identities=19%  Similarity=0.303  Sum_probs=140.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||.||++...     .++..||+|+++...  .......+..|+.++..+.+||||+++++++.+.+..++|||
T Consensus         2 ~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   76 (329)
T cd05618           2 VIGRGSYAKVLLVRLK-----KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE   76 (329)
T ss_pred             eeeeCCCeEEEEEEEC-----CCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEe
Confidence            6999999999999987     577899999997532  233456688899988887689999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|..++.....                 +++..+..++.||+.||.|||+++|+|||||             ++|
T Consensus        77 ~~~~~~L~~~~~~~~~-----------------l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~D  139 (329)
T cd05618          77 YVNGGDLMFHMQRQRK-----------------LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTD  139 (329)
T ss_pred             CCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEee
Confidence            9999999999877654                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      ||+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       140 fG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  181 (329)
T cd05618         140 YGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWA  181 (329)
T ss_pred             CCccccccCCCCccccccCCccccCHHHHcCCCCCCccceec
Confidence            9998753222   24567999999999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=5.6e-30  Score=223.96  Aligned_cols=162  Identities=16%  Similarity=0.216  Sum_probs=138.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||+|...     .++..||+|++....  .......+.+|+.+++.+ +|+||+++++.+.+++.+++||
T Consensus         7 ~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           7 KTLGIGAFGEVCLARKV-----DTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             EEEEeCCCEEEEEEEEC-----CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEE
Confidence            37999999999999987     577899999996431  233456788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.+.+.                 +++..+..++.||+.||+|||+++|+|||||             ++
T Consensus        81 E~~~gg~L~~~l~~~~~-----------------~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~  143 (382)
T cd05625          81 DYIPGGDMMSLLIRMGI-----------------FPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLT  143 (382)
T ss_pred             eCCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEe
Confidence            99999999999987654                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc--------------------------------------------------CCccccccccccccccccC
Q psy12228        217 GFDLCILVFFH--------------------------------------------------DSTLLKTTSTIASLILRNQ  246 (258)
Q Consensus       217 dfgl~~~~~~~--------------------------------------------------~~~~~gt~~y~aPE~~~~~  246 (258)
                      |||++......                                                  ....+||+.|+|||++.+.
T Consensus       144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~  223 (382)
T cd05625         144 DFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT  223 (382)
T ss_pred             ECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC
Confidence            99997532100                                                  0134789999999999999


Q ss_pred             CCCcccceeE
Q psy12228        247 KVSVLLDLIF  256 (258)
Q Consensus       247 ~~s~~~Dv~~  256 (258)
                      .++.++||-.
T Consensus       224 ~~~~~~DiwS  233 (382)
T cd05625         224 GYTQLCDWWS  233 (382)
T ss_pred             CCCCeeeEEe
Confidence            9999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=6.4e-30  Score=218.95  Aligned_cols=160  Identities=21%  Similarity=0.285  Sum_probs=138.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||++...     .++..||+|+++...  .......+.+|+.++..+ +||||+++++++...+..++|||
T Consensus         2 ~lG~G~~g~V~~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E   75 (325)
T cd05594           2 LLGKGTFGKVILVKEK-----ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVME   75 (325)
T ss_pred             eeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEe
Confidence            6899999999999987     578899999997532  233456778999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------------cc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------------FI  216 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------------i~  216 (258)
                      |+++|+|..++.....                 +++..+..++.||+.||.|||+ +||+|||||             ++
T Consensus        76 ~~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~  138 (325)
T cd05594          76 YANGGELFFHLSRERV-----------------FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKIT  138 (325)
T ss_pred             CCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEe
Confidence            9999999999877654                 8999999999999999999997 799999996             78


Q ss_pred             CCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++......   ....||+.|+|||++.+..++.++||.
T Consensus       139 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  180 (325)
T cd05594         139 DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW  180 (325)
T ss_pred             cCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccc
Confidence            999987532221   356799999999999999999999985

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG4257|consensus

Probab=99.97  E-value=1.3e-30  Score=227.59  Aligned_cols=165  Identities=22%  Similarity=0.406  Sum_probs=143.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +.+||+|-||.||.|.+.... .+....||||+.+.+.+.+..+.|+.|+.+|+++ +|||||+++|+|.+. ..|||||
T Consensus       394 ~r~iG~GqFGdVy~gvYt~~~-kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf-dHphIikLIGv~~e~-P~WivmE  470 (974)
T KOG4257|consen  394 KRLIGEGQFGDVYKGVYTDPE-KGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVEQ-PMWIVME  470 (974)
T ss_pred             HHhhcCCcccceeeeEecccc-cCcceeeeeehhccCCChhhHHHHHHHHHHHHhC-CCcchhheeeeeecc-ceeEEEe
Confidence            347999999999999987432 3455789999999877777889999999999999 999999999999754 7899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~d  217 (258)
                      .++.|.|+.||+.+..                .++...+..++.||+.||.|||++++|||||             |++|
T Consensus       471 L~~~GELr~yLq~nk~----------------sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaD  534 (974)
T KOG4257|consen  471 LAPLGELREYLQQNKD----------------SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLAD  534 (974)
T ss_pred             cccchhHHHHHHhccc----------------cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecc
Confidence            9999999999998664                4999999999999999999999999999999             7999


Q ss_pred             CCcceeeeccCC--cccc--ccccccccccccCCCCcccce
Q psy12228        218 FDLCILVFFHDS--TLLK--TTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       218 fgl~~~~~~~~~--~~~g--t~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      ||+++.......  ...|  ...|||||.+.-..++.+|||
T Consensus       535 FGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDV  575 (974)
T KOG4257|consen  535 FGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDV  575 (974)
T ss_pred             cchhhhccccchhhccccccceeecCccccchhcccchhhH
Confidence            999998766542  1122  257999999999999999997

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=5.3e-30  Score=219.01  Aligned_cols=162  Identities=23%  Similarity=0.312  Sum_probs=139.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||.||+|...     .++..||+|+++...  .....+.+..|..++..+.+||||+++++++.+.+.+++|||
T Consensus         2 ~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~E   76 (320)
T cd05590           2 VLGKGSFGKVMLARLK-----ESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVME   76 (320)
T ss_pred             eeeeCCCeEEEEEEEc-----CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEc
Confidence            6899999999999987     577899999997431  233456678899999887579999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                 +++..+..++.|++.||.|||+++|+|||||             ++|
T Consensus        77 y~~~g~L~~~i~~~~~-----------------l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~D  139 (320)
T cd05590          77 FVNGGDLMFHIQKSRR-----------------FDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLAD  139 (320)
T ss_pred             CCCCchHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEee
Confidence            9999999999987655                 8999999999999999999999999999996             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      ||+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       140 fG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  181 (320)
T cd05590         140 FGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWA  181 (320)
T ss_pred             CCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhh
Confidence            9998753222   24567999999999999999999999853

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG4250|consensus

Probab=99.97  E-value=6.9e-31  Score=232.31  Aligned_cols=162  Identities=19%  Similarity=0.259  Sum_probs=143.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------cEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------PLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------~~~  146 (258)
                      .||+|+||.||+|+.+     .+|+.||||.++.......++.+.+|+++|+++ +|+|||+++++-.+..      ...
T Consensus        20 ~LG~Ga~g~V~rgrnk-----etG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   20 RLGKGAFGNVYRGRNK-----ETGRLVAVKTFNKESSLRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             hhcCCccceeeeeccc-----ccccchhHHhhhhhcccchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccccce
Confidence            7999999999999988     799999999998876667788899999999999 8999999999876543      468


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      ++||||++|||+..|....+              ...+++..++.+..+++.||.|||++||+|||||            
T Consensus        94 lvmEyC~gGsL~~~L~~PEN--------------~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedg  159 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPEN--------------AYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDG  159 (732)
T ss_pred             EEEeecCCCcHHHHhcCccc--------------ccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCC
Confidence            99999999999999987543              4569999999999999999999999999999995            


Q ss_pred             -----ccCCCcceeeeccC--Ccccccccccccccccc-CCCCcccce
Q psy12228        215 -----FIGFDLCILVFFHD--STLLKTTSTIASLILRN-QKVSVLLDL  254 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~s~~~Dv  254 (258)
                           ++|||.|+......  .+..||..|++||++.. +.|+.-+|.
T Consensus       160 q~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDL  207 (732)
T KOG4250|consen  160 QSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDL  207 (732)
T ss_pred             ceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeeh
Confidence                 89999999766655  58899999999999995 777888883

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=1e-29  Score=217.97  Aligned_cols=162  Identities=18%  Similarity=0.277  Sum_probs=140.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||.||+|...     .++..||+|+++...  .....+.+.+|+.++..+.+||||+.+++++.+.+.+++|||
T Consensus         2 ~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   76 (327)
T cd05617           2 VIGRGSYAKVLLVRLK-----KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIE   76 (327)
T ss_pred             eeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEe
Confidence            6999999999999987     577899999997542  233456788999999998779999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|..++.....                 +++..+..++.||+.||.|||+++|+|||||             ++|
T Consensus        77 ~~~~~~L~~~~~~~~~-----------------l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~D  139 (327)
T cd05617          77 YVNGGDLMFHMQRQRK-----------------LPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTD  139 (327)
T ss_pred             CCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEec
Confidence            9999999999887654                 9999999999999999999999999999995             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      ||+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  181 (327)
T cd05617         140 YGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWA  181 (327)
T ss_pred             cccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeeh
Confidence            9998753221   24567999999999999999999999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.97  E-value=8e-30  Score=222.48  Aligned_cols=185  Identities=34%  Similarity=0.435  Sum_probs=143.2

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.+.+.....++..||||+++........+.+.+|+.++..+++||||++++++|.+.+..++|||
T Consensus        40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E  119 (375)
T cd05104          40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITE  119 (375)
T ss_pred             hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeeh
Confidence            34899999999999986543333566789999998654455567899999999999789999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCC--------------------------CCC----------CCC------------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGY--------------------------ESP----------LGS------------------  176 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~--------------------------~~~----------~~~------------------  176 (258)
                      |+++|+|.+++.........                          ...          ...                  
T Consensus       120 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (375)
T cd05104         120 YCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDV  199 (375)
T ss_pred             hccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceeccccc
Confidence            99999999999764310000                          000          000                  


Q ss_pred             ----CCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCcceeeeccC-----Cccccc
Q psy12228        177 ----AYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILVFFHD-----STLLKT  234 (258)
Q Consensus       177 ----~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~~~-----~~~~gt  234 (258)
                          .......+++..+..++.||+.||.|||+++|+|||||             ++|||+++......     ....++
T Consensus       200 ~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~  279 (375)
T cd05104         200 TSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLP  279 (375)
T ss_pred             HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCC
Confidence                00112358899999999999999999999999999996             78999998643322     123345


Q ss_pred             cccccccccccCCCCccccee
Q psy12228        235 TSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       235 ~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ..|+|||++.+..++.++||.
T Consensus       280 ~~y~aPE~~~~~~~~~~sDi~  300 (375)
T cd05104         280 VKWMAPESIFNCVYTFESDVW  300 (375)
T ss_pred             cceeChhHhcCCCCCCCCCHH
Confidence            679999999999999999974

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=1e-29  Score=216.95  Aligned_cols=162  Identities=22%  Similarity=0.294  Sum_probs=138.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .++..||+|+++...  .......+..|..++..+.+||||+++++++.+.+.+++|||
T Consensus         2 ~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~e   76 (316)
T cd05619           2 MLGKGSFGKVFLAELK-----GTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVME   76 (316)
T ss_pred             eeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEe
Confidence            6899999999999987     577899999997532  123345677788888765599999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                 +++..+..++.|++.||.|||+++|+|||||             ++|
T Consensus        77 y~~~g~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~D  139 (316)
T cd05619          77 YLNGGDLMFHIQSCHK-----------------FDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIAD  139 (316)
T ss_pred             CCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEcc
Confidence            9999999999987554                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      ||+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws  181 (316)
T cd05619         140 FGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWS  181 (316)
T ss_pred             CCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhh
Confidence            9998754322   24567899999999999999999999853

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0588|consensus

Probab=99.97  E-value=2.2e-30  Score=227.58  Aligned_cols=163  Identities=22%  Similarity=0.325  Sum_probs=146.8

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCC--CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ..+..||.|+-|.|-+|++.     .+|+.+|||++...  .+......+.+|+-+|+.+ .||||+.+|+.+++..++|
T Consensus        15 kLgkTLG~Gstg~vrlakh~-----~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~ly   88 (786)
T KOG0588|consen   15 KLGKTLGKGSTGCVRLAKHA-----ETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLY   88 (786)
T ss_pred             eccccccCCCCceehhhhcc-----cccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEE
Confidence            33457999999999999998     79999999999654  2445567788999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +|.||+++|.|.++|...+.                 +++.+++.++.||+.|+.|+|..+|+|||||            
T Consensus        89 lvlEyv~gGELFdylv~kG~-----------------l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nI  151 (786)
T KOG0588|consen   89 LVLEYVPGGELFDYLVRKGP-----------------LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNI  151 (786)
T ss_pred             EEEEecCCchhHHHHHhhCC-----------------CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCE
Confidence            99999999999999999887                 9999999999999999999999999999995            


Q ss_pred             -ccCCCcceeeeccC--CccccccccccccccccCCC-Ccccce
Q psy12228        215 -FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKV-SVLLDL  254 (258)
Q Consensus       215 -i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-s~~~Dv  254 (258)
                       |+|||+|..-..+.  .+.||+|.|.|||++.|.+| +.++||
T Consensus       152 KIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDV  195 (786)
T KOG0588|consen  152 KIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDV  195 (786)
T ss_pred             eeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCcccc
Confidence             89999998644443  68899999999999999999 688997

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=3.3e-29  Score=212.43  Aligned_cols=184  Identities=24%  Similarity=0.331  Sum_probs=143.0

Q ss_pred             eeeeeecCceEEEEEEEcccc-----------cCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeE
Q psy12228         71 EYVKIKCAFGKVICAEANGIL-----------KQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVC  139 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~-----------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~  139 (258)
                      ...||+|+||.||+|.+....           ....+..||+|.+...........|.+|+.++..+ +||||+++++++
T Consensus        10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~   88 (304)
T cd05096          10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL-KDPNIIRLLGVC   88 (304)
T ss_pred             eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEE
Confidence            348999999999999864211           11245689999998765566667899999999999 999999999999


Q ss_pred             EcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---
Q psy12228        140 TQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESP--LGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---  214 (258)
Q Consensus       140 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---  214 (258)
                      .+.+..+++|||+++|+|.+++............  ..........+++..+..++.||+.||.|||+++|+|||||   
T Consensus        89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~N  168 (304)
T cd05096          89 VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRN  168 (304)
T ss_pred             ecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhh
Confidence            9999999999999999999999764321100000  00001223458899999999999999999999999999995   


Q ss_pred             ----------ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 ----------FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----------i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                ++|||+++......     ....++..|+|||++.+..++.++||.
T Consensus       169 ill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  224 (304)
T cd05096         169 CLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVW  224 (304)
T ss_pred             eEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhH
Confidence                      78999998654332     233457789999999988999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.97  E-value=1.3e-29  Score=220.05  Aligned_cols=161  Identities=17%  Similarity=0.252  Sum_probs=139.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..||+|+++...  .......+.+|+.++..+ +|+||+++++.+.+.+.+++||
T Consensus         7 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           7 KVIGRGAFGEVRLVQKK-----DTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             EEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence            37999999999999987     578899999996421  233456788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.|++.||.|||++||+|||||             ++
T Consensus        81 E~~~gg~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~  143 (360)
T cd05627          81 EFLPGGDMMTLLMKKDT-----------------LSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLS  143 (360)
T ss_pred             eCCCCccHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEe
Confidence            99999999999987655                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc--------------------------------------CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH--------------------------------------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~--------------------------------------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++......                                      ....+||+.|+|||++.+..++.++||.
T Consensus       144 DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw  220 (360)
T cd05627         144 DFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWW  220 (360)
T ss_pred             eccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceec
Confidence            99998643211                                      0135799999999999999999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=1.3e-29  Score=216.30  Aligned_cols=161  Identities=24%  Similarity=0.303  Sum_probs=138.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||.||+|...     .++..||+|+++...  .......+..|..++....+||||+++++++.+.+.+++|||
T Consensus         2 ~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   76 (316)
T cd05620           2 VLGKGSFGKVLLAELK-----GKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVME   76 (316)
T ss_pred             eeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEEC
Confidence            6899999999999987     577899999997532  123345677788888765589999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|..++.....                 +++..+..++.|++.||+|||++||+|||||             ++|
T Consensus        77 ~~~~g~L~~~i~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~D  139 (316)
T cd05620          77 FLNGGDLMFHIQDKGR-----------------FDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIAD  139 (316)
T ss_pred             CCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCc
Confidence            9999999999987654                 8999999999999999999999999999996             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....   .....||+.|+|||++.+..++.++||.
T Consensus       140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  180 (316)
T cd05620         140 FGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWW  180 (316)
T ss_pred             cCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchh
Confidence            9998753222   2456799999999999999999999985

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=2.6e-29  Score=215.06  Aligned_cols=164  Identities=20%  Similarity=0.266  Sum_probs=138.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .||+|+||.||++....  ...+++.||+|+++...   .......+.+|+.+++.+ +||||+++++++..++..++||
T Consensus         3 ~lg~G~~g~V~~~~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~   79 (323)
T cd05584           3 VLGKGGYGKVFQVRKVT--GADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLIL   79 (323)
T ss_pred             eeeecCCeEEEEEEEcc--cCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEE
Confidence            79999999999998641  11357899999997431   223345678999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             ++
T Consensus        80 e~~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~  142 (323)
T cd05584          80 EYLSGGELFMHLEREGI-----------------FMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLT  142 (323)
T ss_pred             eCCCCchHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEe
Confidence            99999999999987654                 8899999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC---CccccccccccccccccCCCCcccceeE
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |||+++......   ....||+.|+|||++.+..++.++||..
T Consensus       143 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  185 (323)
T cd05584         143 DFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWS  185 (323)
T ss_pred             eCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecc
Confidence            999987533222   3567999999999999999999999853

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=2.5e-29  Score=215.13  Aligned_cols=162  Identities=23%  Similarity=0.330  Sum_probs=139.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|+++...  .......+..|..++..+.+|++|+.+++++.+.+.+++||
T Consensus         6 ~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           6 MVLGKGSFGKVMLAERK-----GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             EEEeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            48999999999999987     577899999997532  22334567788888888867899999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             ++
T Consensus        81 E~~~~g~L~~~~~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~  143 (323)
T cd05616          81 EYVNGGDLMYQIQQVGR-----------------FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIA  143 (323)
T ss_pred             cCCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEc
Confidence            99999999999987655                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....   .....||+.|+|||++.+..++.++||.
T Consensus       144 DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  185 (323)
T cd05616         144 DFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWW  185 (323)
T ss_pred             cCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchh
Confidence            99999854322   2456799999999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.97  E-value=1.9e-29  Score=215.88  Aligned_cols=163  Identities=21%  Similarity=0.306  Sum_probs=139.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...||+|+||.||+|...     .++..||+|+++...  .....+.+..|..++..+.+|++|+++++++.+.+.+++|
T Consensus         5 ~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05615           5 LMVLGKGSFGKVMLAERK-----GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV   79 (323)
T ss_pred             EEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence            348999999999999987     578899999997432  2334466888999999885678888999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++.....                 +++.++..++.||+.||.|||++||+|||||             +
T Consensus        80 ~Ey~~~g~L~~~i~~~~~-----------------l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL  142 (323)
T cd05615          80 MEYVNGGDLMYHIQQVGK-----------------FKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKI  142 (323)
T ss_pred             EcCCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEE
Confidence            999999999999987655                 8999999999999999999999999999996             7


Q ss_pred             cCCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++.....   .....||+.|+|||++.+..++.++||.
T Consensus       143 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  185 (323)
T cd05615         143 ADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWW  185 (323)
T ss_pred             eccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchh
Confidence            899998754322   2356789999999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0579|consensus

Probab=99.97  E-value=3.4e-31  Score=231.74  Aligned_cols=160  Identities=22%  Similarity=0.329  Sum_probs=141.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||.|+||+||++..+     .++...|.|+|... ++.+.++++.|+++|..+ .||+||++++.|+..+.+||+.|||
T Consensus        39 ELGDGAFGKVyKA~nk-----et~~lAAaKvIetk-seEELEDylVEIeILa~C-dHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   39 ELGDGAFGKVYKAVNK-----ETKLLAAAKVIETK-SEEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             hhcCccchhhhhhhcc-----cchhhhhhhhhccc-chhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCceEEEEeec
Confidence            5789999999999987     56777889999765 677889999999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      .||-....+...+.                .++++++.-+++|++.||.|||+++|||||||             ++|||
T Consensus       112 ~GGAVDaimlEL~r----------------~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFG  175 (1187)
T KOG0579|consen  112 GGGAVDAIMLELGR----------------VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFG  175 (1187)
T ss_pred             CCchHhHHHHHhcc----------------ccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeeccc
Confidence            99999998887654                49999999999999999999999999999996             78999


Q ss_pred             cceeeecc---CCcccccccccccccc-----ccCCCCccccee
Q psy12228        220 LCILVFFH---DSTLLKTTSTIASLIL-----RNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~---~~~~~gt~~y~aPE~~-----~~~~~s~~~Dv~  255 (258)
                      .+......   ..++.|||+|||||++     .+.+|+.++||-
T Consensus       176 VSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiW  219 (1187)
T KOG0579|consen  176 VSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIW  219 (1187)
T ss_pred             ccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHH
Confidence            88654322   2689999999999985     568999999973

>KOG0586|consensus

Probab=99.96  E-value=1.6e-29  Score=220.76  Aligned_cols=163  Identities=23%  Similarity=0.336  Sum_probs=146.9

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      .....||+|.|++|.++...     .++..||||.+.+.. ....+..+.+|+++|+.+ +|||||+++.+......+|+
T Consensus        59 ~i~~tig~g~f~~V~La~~~-----~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   59 VIIKTIGKGNFAKVKLARHI-----LTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             eeeeeeccceeEEEEeeEec-----CCCceEEEEEehhcccChHHHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeEE
Confidence            55568999999999999998     688999999997644 334456699999999999 99999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+.+|.+.+||.+++.                 +.+..+..++.|+.+|++|||+++|+|||||             
T Consensus       133 V~eya~~ge~~~yl~~~gr-----------------~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnik  195 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHGR-----------------MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIK  195 (596)
T ss_pred             EEEeccCchhHHHHHhccc-----------------chhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccccee
Confidence            9999999999999999887                 7889999999999999999999999999995             


Q ss_pred             ccCCCcceeeeccC--CccccccccccccccccCCC-Ccccce
Q psy12228        215 FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKV-SVLLDL  254 (258)
Q Consensus       215 i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-s~~~Dv  254 (258)
                      |+|||++..+....  .+.+|++.|.|||++.+.+| ++.+|+
T Consensus       196 IaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~  238 (596)
T KOG0586|consen  196 IADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDI  238 (596)
T ss_pred             eeccccceeecccccccccCCCCCccChHhhcCcccCCcceeh
Confidence            89999999877664  68999999999999999988 578885

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.96  E-value=2.5e-29  Score=215.19  Aligned_cols=162  Identities=23%  Similarity=0.336  Sum_probs=138.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|+++...  .....+.+..|..++..+.+|++|+.+++++.+.+.+++||
T Consensus         6 ~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           6 MVLGKGSFGKVMLAERK-----GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             EEEeeccCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            48999999999999987     577899999997532  23445678899999999944567889999999989999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             ++
T Consensus        81 E~~~~g~L~~~~~~~~~-----------------~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~  143 (324)
T cd05587          81 EYVNGGDLMYHIQQVGK-----------------FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIA  143 (324)
T ss_pred             cCCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEe
Confidence            99999999999987655                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++......   .....||+.|+|||++.+..++.++||.
T Consensus       144 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  185 (324)
T cd05587         144 DFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWW  185 (324)
T ss_pred             ecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchh
Confidence            99998753322   2356799999999999999999999985

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=2.3e-29  Score=214.94  Aligned_cols=161  Identities=24%  Similarity=0.345  Sum_probs=139.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||++...     .++..||+|+++...  .......+..|..++..+.+||||+++++++.+.+.+++|||
T Consensus         2 ~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e   76 (318)
T cd05570           2 VLGKGSFGKVLLAELK-----GTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVME   76 (318)
T ss_pred             eeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEc
Confidence            6899999999999987     577899999997532  233456678899999888679999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|..++.....                 +++..+..++.|++.||.|||+++|+|||||             ++|
T Consensus        77 ~~~~~~L~~~~~~~~~-----------------l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~D  139 (318)
T cd05570          77 YVNGGDLMFHIQRSGR-----------------FDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIAD  139 (318)
T ss_pred             CCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecc
Confidence            9999999999987654                 9999999999999999999999999999995             789


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....   .....||+.|+|||++.+..++.++||.
T Consensus       140 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Diw  180 (318)
T cd05570         140 FGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWW  180 (318)
T ss_pred             cCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhh
Confidence            9998753222   2355789999999999999999999985

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0584|consensus

Probab=99.96  E-value=6.9e-31  Score=229.62  Aligned_cols=163  Identities=24%  Similarity=0.318  Sum_probs=143.2

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEec---CCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc-
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLK---EGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP-  144 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~---~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~-  144 (258)
                      .+..+||+|+|-+||+|...     .+|..||.-.++   ...+....++|..|+++|+.| +||||+++|.++.+... 
T Consensus        43 k~~evLGrGafKtVYka~De-----~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~~n~  116 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDE-----EEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDTDNK  116 (632)
T ss_pred             ehhhhcccccceeeeecccc-----ccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecCCCc
Confidence            44558999999999999987     688889865553   223566678999999999999 99999999999987665 


Q ss_pred             -EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC--CccccCcc-------
Q psy12228        145 -LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR--KVGNDAVR-------  214 (258)
Q Consensus       145 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~--~iiH~DlK-------  214 (258)
                       +.+|+|.+..|+|+.|+++++.                 ++...+..|++||++||.|||++  .|||||||       
T Consensus       117 ~in~iTEL~TSGtLr~Y~kk~~~-----------------vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin  179 (632)
T KOG0584|consen  117 TINFITELFTSGTLREYRKKHRR-----------------VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN  179 (632)
T ss_pred             eeeeeeecccCCcHHHHHHHhcc-----------------CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc
Confidence             8899999999999999999987                 99999999999999999999998  89999995       


Q ss_pred             -------ccCCCcceeeeccC-CccccccccccccccccCCCCccccee
Q psy12228        215 -------FIGFDLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -------i~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                             |.|.|||....... ..+.|||.|||||+.. ..|++.+||+
T Consensus       180 G~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVY  227 (632)
T KOG0584|consen  180 GNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVY  227 (632)
T ss_pred             CCcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhh
Confidence                   88999998765544 5689999999999998 6999999986

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=3.4e-29  Score=218.14  Aligned_cols=162  Identities=19%  Similarity=0.238  Sum_probs=137.5

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...||+|+||.||++...     .++..+|+|++....  .......+.+|+.+++.+ +||||+++++++.+++.+++|
T Consensus        48 ~~~lG~G~fg~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv  121 (370)
T cd05621          48 VKVIGRGAFGEVQLVRHK-----SSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLYMV  121 (370)
T ss_pred             EEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence            348999999999999987     577899999996421  223345688999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++....                  +++..+..++.||+.||+|||+++|+|||||             +
T Consensus       122 ~Ey~~gg~L~~~l~~~~------------------~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL  183 (370)
T cd05621         122 MEYMPGGDLVNLMSNYD------------------VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKL  183 (370)
T ss_pred             EcCCCCCcHHHHHHhcC------------------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEE
Confidence            99999999999997542                  7899999999999999999999999999996             7


Q ss_pred             cCCCcceeeeccC----CccccccccccccccccCC----CCcccceeE
Q psy12228        216 IGFDLCILVFFHD----STLLKTTSTIASLILRNQK----VSVLLDLIF  256 (258)
Q Consensus       216 ~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~----~s~~~Dv~~  256 (258)
                      +|||++.......    ....||+.|+|||++.+..    ++.++||-.
T Consensus       184 ~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwS  232 (370)
T cd05621         184 ADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS  232 (370)
T ss_pred             EecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEe
Confidence            8999998654322    3567999999999997643    789999853

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.96  E-value=2.9e-29  Score=214.65  Aligned_cols=161  Identities=25%  Similarity=0.335  Sum_probs=135.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHH-HHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      +||+|+||.||+|...     .++..||+|++....  .......+..|.. +++.+ +||||+++++++.+.+..++||
T Consensus         2 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~   75 (323)
T cd05575           2 VIGKGSFGKVLLAKHK-----ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVL   75 (323)
T ss_pred             eeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEE
Confidence            6899999999999987     578999999996431  1223345566655 45678 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|..++.....                 +++..+..++.||+.||.|||++||+|||||             ++
T Consensus        76 e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~  138 (323)
T cd05575          76 DYVNGGELFFHLQRERS-----------------FPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLT  138 (323)
T ss_pred             cCCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEe
Confidence            99999999999987654                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |||+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       139 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws  181 (323)
T cd05575         139 DFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWC  181 (323)
T ss_pred             ccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccc
Confidence            99998753222   23567999999999999999999999853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.96  E-value=3e-29  Score=208.11  Aligned_cols=167  Identities=27%  Similarity=0.461  Sum_probs=139.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||.|.||.||+|.+.. .....+..|+||.++........+.|.+|++.++++ +||||++++|++...+..++|+||
T Consensus         5 ~~ig~G~fg~v~~~~~~~-~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    5 KQIGEGSFGKVYRAEWKQ-KDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEESSEEEEEEEEES-TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             eEEccCCCcEEEEEEEEc-ccCCCCEEEEEEEeccccccccceeeeecccccccc-cccccccccccccccccccccccc
Confidence            389999999999999973 233467899999997765666678999999999999 999999999999988889999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~df  218 (258)
                      +++|+|.++|.....               ..+++..+..|+.||+.||.|||+++++|+||             |++||
T Consensus        83 ~~~g~L~~~L~~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f  147 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNK---------------EPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDF  147 (259)
T ss_dssp             -TTEBHHHHHHHTCT---------------TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEEST
T ss_pred             ccccccccccccccc---------------cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999998722               23899999999999999999999999999999             58899


Q ss_pred             Ccceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++......     .........|+|||++.+..++.++||.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVy  189 (259)
T PF07714_consen  148 GLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVY  189 (259)
T ss_dssp             TTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc
Confidence            999865222     1334566789999999998999999985

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.96  E-value=3e-29  Score=214.78  Aligned_cols=161  Identities=25%  Similarity=0.325  Sum_probs=134.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHH-HHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .||+|+||.||+|...     .++..||+|++....  .......+..|.. +++.+ +||||+++++++...+..++||
T Consensus         2 ~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~   75 (325)
T cd05602           2 VIGKGSFGKVLLARHK-----AEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVL   75 (325)
T ss_pred             eeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEE
Confidence            6899999999999987     567899999996431  1222334555554 46778 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||             ++
T Consensus        76 e~~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~  138 (325)
T cd05602          76 DYINGGELFYHLQRERC-----------------FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLT  138 (325)
T ss_pred             eCCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEc
Confidence            99999999999987654                 8899999999999999999999999999996             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |||+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       139 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  181 (325)
T cd05602         139 DFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWC  181 (325)
T ss_pred             cCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCcccccc
Confidence            99998753322   24567999999999999999999999853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG4278|consensus

Probab=99.96  E-value=3.1e-30  Score=225.39  Aligned_cols=162  Identities=29%  Similarity=0.386  Sum_probs=143.0

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..++||-|.||.||.|.|+     +....||||.++.+  ....++|++|+.+|+.+ +|||+|+++|+|......|||+
T Consensus       271 MkhKLGGGQYGeVYeGvWK-----kyslTvAVKtLKED--tMeveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFYIiT  342 (1157)
T KOG4278|consen  271 MKHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKED--TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFYIIT  342 (1157)
T ss_pred             eeeccCCCcccceeeeeee-----ccceeeehhhhhhc--chhHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeEEEE
Confidence            3458999999999999998     67799999999874  44578899999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------ccc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~  216 (258)
                      |||.+|+|.+||+....               ..++.-.++.++.||++||+||..+++|||||             |++
T Consensus       343 EfM~yGNLLdYLRecnr---------------~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvA  407 (1157)
T KOG4278|consen  343 EFMCYGNLLDYLRECNR---------------SEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVA  407 (1157)
T ss_pred             ecccCccHHHHHHHhch---------------hhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEee
Confidence            99999999999998764               34777888999999999999999999999998             799


Q ss_pred             CCCcceeeeccCC-ccccc---cccccccccccCCCCcccce
Q psy12228        217 GFDLCILVFFHDS-TLLKT---TSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       217 dfgl~~~~~~~~~-~~~gt---~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      ||||++.+..... .-+|.   ..|.|||.+....++.|+||
T Consensus       408 DFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDV  449 (1157)
T KOG4278|consen  408 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV  449 (1157)
T ss_pred             ccchhhhhcCCceecccCccCcccccCcccccccccccchhh
Confidence            9999997655542 23333   57999999999999999997

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.96  E-value=2.4e-29  Score=219.40  Aligned_cols=185  Identities=32%  Similarity=0.410  Sum_probs=143.5

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.........+...||+|+++........+.+.+|+.+++.+.+|+||++++++|...+..++|||
T Consensus        43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~e  122 (374)
T cd05106          43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITE  122 (374)
T ss_pred             hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHh
Confidence            34799999999999997644344456789999998665555667899999999999789999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCC---C--------------------------------------------------CCCCCCCC
Q psy12228        151 FAPHGNLRDFLRKHRPSS---G--------------------------------------------------YESPLGSA  177 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~---~--------------------------------------------------~~~~~~~~  177 (258)
                      |+++|+|.+++.......   .                                                  ........
T Consensus       123 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (374)
T cd05106         123 YCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEED  202 (374)
T ss_pred             hccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhc
Confidence            999999999997643100   0                                                  00000001


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCcceeeeccC-----Ccccccccccc
Q psy12228        178 YTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILVFFHD-----STLLKTTSTIA  239 (258)
Q Consensus       178 ~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~~~-----~~~~gt~~y~a  239 (258)
                      ......+++..++.|+.||+.||.|||+++|+|||||             ++|||+++......     ....+++.|+|
T Consensus       203 ~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~a  282 (374)
T cd05106         203 TEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMA  282 (374)
T ss_pred             cCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeC
Confidence            1123458999999999999999999999999999996             78999987543322     12234567999


Q ss_pred             ccccccCCCCccccee
Q psy12228        240 SLILRNQKVSVLLDLI  255 (258)
Q Consensus       240 PE~~~~~~~s~~~Dv~  255 (258)
                      ||++.+..++.++||.
T Consensus       283 PE~~~~~~~~~~~Dvw  298 (374)
T cd05106         283 PESIFDCVYTVQSDVW  298 (374)
T ss_pred             HHHhcCCCCCccccHH
Confidence            9999999999999984

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.96  E-value=5.5e-29  Score=218.57  Aligned_cols=184  Identities=32%  Similarity=0.502  Sum_probs=142.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||+|...+.........||||+++........+.+.+|+.+++.+..||||++++++|.+.+..+|||||
T Consensus        43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey  122 (400)
T cd05105          43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEY  122 (400)
T ss_pred             heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEe
Confidence            37999999999999976433334456899999986655566678999999999994599999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCC------------------------------------------------------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYE------------------------------------------------------------  171 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~------------------------------------------------------------  171 (258)
                      |++|+|.++|..........                                                            
T Consensus       123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (400)
T cd05105         123 CFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSD  202 (400)
T ss_pred             cCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhh
Confidence            99999999998643100000                                                            


Q ss_pred             -------CCCCC------------CCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        172 -------SPLGS------------AYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       172 -------~~~~~------------~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                             .+...            .......+++..+..++.|++.||.|||+++|+|||||             ++|||
T Consensus       203 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfG  282 (400)
T cd05105         203 IQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFG  282 (400)
T ss_pred             cccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCC
Confidence                   00000            00112358899999999999999999999999999996             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......     ....+++.|+|||++.+..+++++||.
T Consensus       283 la~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  323 (400)
T cd05105         283 LARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVW  323 (400)
T ss_pred             cceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHH
Confidence            988643322     234566789999999999999999974

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.96  E-value=3.5e-29  Score=214.34  Aligned_cols=161  Identities=24%  Similarity=0.317  Sum_probs=135.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHH-HHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEM-MKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~-l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .||+|+||.||+|...     .++..||+|++....  .......+..|..+ ++.+ +||||+++++++..++..++||
T Consensus         2 ~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~   75 (325)
T cd05604           2 VIGKGSFGKVLLAKRK-----LDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVL   75 (325)
T ss_pred             ceeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEE
Confidence            6899999999999987     578899999996432  22334456666654 5667 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|..++.....                 +++..+..++.||+.||.|||++||+|||||             ++
T Consensus        76 e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~  138 (325)
T cd05604          76 DFVNGGELFFHLQRERS-----------------FPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLT  138 (325)
T ss_pred             cCCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEe
Confidence            99999999999887654                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |||+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       139 DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws  181 (325)
T cd05604         139 DFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWC  181 (325)
T ss_pred             ecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCcccc
Confidence            99998753222   24567999999999999999999999853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=3.6e-29  Score=213.93  Aligned_cols=161  Identities=24%  Similarity=0.306  Sum_probs=135.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHH-HHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      +||+|+||.||+|...     .++..||+|++....  .......+..|.. +++.+ +||||+++++++.+.+..++||
T Consensus         2 ~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~   75 (321)
T cd05603           2 VIGKGSFGKVLLAKRK-----SDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVL   75 (321)
T ss_pred             eeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEE
Confidence            6999999999999987     577899999996432  1223345666654 56778 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|..++.....                 +++..+..++.||+.||.|||+++|+|||||             ++
T Consensus        76 e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~  138 (321)
T cd05603          76 DYVNGGELFFHLQRERC-----------------FLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLT  138 (321)
T ss_pred             cCCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEc
Confidence            99999999998876554                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |||+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       139 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  181 (321)
T cd05603         139 DFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWC  181 (321)
T ss_pred             cCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccc
Confidence            99998753222   24567899999999999999999999853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=4e-29  Score=209.60  Aligned_cols=163  Identities=15%  Similarity=0.181  Sum_probs=137.4

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ||+|+||.||++...     .+++.||+|++....  .....+.+..|+.+++.+ +|+||+++.+++......++||||
T Consensus         1 lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~   74 (280)
T cd05608           1 LGKGGFGEVSACQMR-----ATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTI   74 (280)
T ss_pred             CCCCCceeEEEEEEc-----cCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeC
Confidence            689999999999987     577899999996432  122345678899999999 999999999999999899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|..++.....             ....+++..+..++.||+.||.|||+++|+|||||             ++||
T Consensus        75 ~~~g~L~~~~~~~~~-------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~df  141 (280)
T cd05608          75 MNGGDLRYHIYNVDE-------------ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDL  141 (280)
T ss_pred             CCCCCHHHHHHhccc-------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeC
Confidence            999999988864321             12348999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......   ....||+.|+|||++.+..++.++||.
T Consensus       142 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvw  181 (280)
T cd05608         142 GLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYF  181 (280)
T ss_pred             ccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHH
Confidence            9987654432   345789999999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=4.1e-29  Score=213.30  Aligned_cols=164  Identities=21%  Similarity=0.226  Sum_probs=139.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||++....  ...++..||+|+++... .......+..|+.+++++ +||||+++++++.+++..++||||
T Consensus         3 ~lg~G~~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   79 (318)
T cd05582           3 VLGQGSFGKVFLVRKIT--GPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILDF   79 (318)
T ss_pred             eeeeCCCEEEEEEEEec--cCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEcC
Confidence            79999999999987631  12467899999997532 223345678899999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.+...                 +++..+..++.||+.||.|||+++|+|||||             ++||
T Consensus        80 ~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Df  142 (318)
T cd05582          80 LRGGDLFTRLSKEVM-----------------FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF  142 (318)
T ss_pred             CCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeec
Confidence            999999999977554                 8999999999999999999999999999995             7899


Q ss_pred             Ccceeeecc---CCccccccccccccccccCCCCcccceeE
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |+++.....   .....||+.|+|||++.+..++.++||..
T Consensus       143 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Diws  183 (318)
T cd05582         143 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWS  183 (318)
T ss_pred             cCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceec
Confidence            998764333   23567899999999999989999999853

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=8.2e-29  Score=212.64  Aligned_cols=160  Identities=18%  Similarity=0.221  Sum_probs=141.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...     .++..+|+|.+.........+.+.+|+++++.+ +||||+++++++..++..++||||+
T Consensus        12 ~lg~G~~g~V~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~   85 (331)
T cd06649          12 ELGAGNGGVVTKVQHK-----PSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHM   85 (331)
T ss_pred             eecCCCCEEEEEEEEC-----CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEeecC
Confidence            7999999999999987     577899999998655555667899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------ccCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FIGF  218 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~df  218 (258)
                      ++|+|.+++.....                 +++..+..++.|++.||.|||++ +|+|||||             ++||
T Consensus        86 ~~~~L~~~l~~~~~-----------------~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Df  148 (331)
T cd06649          86 DGGSLDQVLKEAKR-----------------IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDF  148 (331)
T ss_pred             CCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccC
Confidence            99999999987654                 89999999999999999999986 69999996             7899


Q ss_pred             Ccceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++...... .....||+.|+|||++.+..++.++||.
T Consensus       149 g~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Diw  186 (331)
T cd06649         149 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW  186 (331)
T ss_pred             cccccccccccccCCCCcCcCCHhHhcCCCCCchHhHH
Confidence            998754332 2456799999999999999999999974

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4.3e-29  Score=215.62  Aligned_cols=162  Identities=17%  Similarity=0.257  Sum_probs=141.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|+++...  .......+.+|+.++..+ +||||+++++++.+++..++||
T Consensus         7 ~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           7 KVIGRGAFGEVWLVRDK-----DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             EEEEeCCcEEEEEEEEC-----CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEEE
Confidence            38999999999999987     578999999997432  123456788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||             ++
T Consensus        81 e~~~~~~L~~~l~~~~~-----------------l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~  143 (350)
T cd05573          81 EYMPGGDLMNLLIRKDV-----------------FPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLA  143 (350)
T ss_pred             cCCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEee
Confidence            99999999999987654                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC--------------------------------CccccccccccccccccCCCCcccceeE
Q psy12228        217 GFDLCILVFFHD--------------------------------STLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~~--------------------------------~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |||++.......                                ....||+.|+|||++.+..++.++||..
T Consensus       144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  215 (350)
T cd05573         144 DFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWS  215 (350)
T ss_pred             cCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEe
Confidence            999987543322                                3457899999999999999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0033|consensus

Probab=99.96  E-value=3.4e-31  Score=208.39  Aligned_cols=159  Identities=19%  Similarity=0.230  Sum_probs=141.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|.|+.|+++...     .+++.+|+|.++... +....+.+.+|+.+.+.| +|||||++..........+||+|+
T Consensus        18 ~igkG~FSvVrRc~~~-----~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L-qHP~IvrL~~ti~~~~~~ylvFe~   91 (355)
T KOG0033|consen   18 ELGKGAFSVVRRCVHK-----TTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDL   91 (355)
T ss_pred             HHccCchHHHHHHHhc-----cchHHHHHHHhhhhhhccccHHHHHHHHHHHHhc-CCCcEeehhhhhcccceeEEEEec
Confidence            7999999999999887     688999999996432 334567789999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------c
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------F  215 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i  215 (258)
                      +.||+|..-+-.+.-                 .++..+-.++.||+.+|.|+|.++|||||+|                +
T Consensus        92 m~G~dl~~eIV~R~~-----------------ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL  154 (355)
T KOG0033|consen   92 VTGGELFEDIVAREF-----------------YSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKL  154 (355)
T ss_pred             ccchHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceee
Confidence            999999876665443                 8999999999999999999999999999994                8


Q ss_pred             cCCCcceeeeccC--CccccccccccccccccCCCCcccce
Q psy12228        216 IGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       216 ~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      +|||+|.....+.  ..++|||.|||||++...+|+..+||
T Consensus       155 ~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDi  195 (355)
T KOG0033|consen  155 ADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDI  195 (355)
T ss_pred             cccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchh
Confidence            9999999877443  57899999999999999999999996

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.96  E-value=1.2e-28  Score=205.03  Aligned_cols=165  Identities=22%  Similarity=0.255  Sum_probs=138.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.+..  ....+..||+|.++...+......+.+|+..++.+ +||||+++++++..++..++||||
T Consensus        11 ~~ig~G~fg~V~~~~~~~--~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~   87 (266)
T cd05064          11 RILGTGRFGELCRGCLKL--PSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTMMIVTEY   87 (266)
T ss_pred             eeecccCCCeEEEEEEec--CCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCcEEEEEe
Confidence            389999999999998752  12356899999998765666667899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..++.++.|++.||+|||+++++|||||             ++||
T Consensus        88 ~~~~~L~~~l~~~~~----------------~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~df  151 (266)
T cd05064          88 MSNGALDSFLRKHEG----------------QLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGF  151 (266)
T ss_pred             CCCCcHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCC
Confidence            999999999986432                38999999999999999999999999999996             6788


Q ss_pred             CcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |.+.......    ....++..|+|||++.+..++.++||.
T Consensus       152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  192 (266)
T cd05064         152 RRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVW  192 (266)
T ss_pred             cccccccccchhcccCCCCceeecCHHHHhhCCccchhHHH
Confidence            8765432221    123445789999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=1.1e-28  Score=214.96  Aligned_cols=162  Identities=20%  Similarity=0.215  Sum_probs=136.8

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...||+|+||.||++...     .++..||+|+++...  .......+.+|+.+++.+ +||||+++++++.+++..++|
T Consensus        48 ~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~lv  121 (370)
T cd05596          48 IKVIGRGAFGEVQLVRHK-----SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLYMV  121 (370)
T ss_pred             EEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEE
Confidence            348999999999999987     577899999996421  223345678999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++....                  +++..+..++.||+.||.|||+++|+|||||             +
T Consensus       122 ~Ey~~gg~L~~~l~~~~------------------l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL  183 (370)
T cd05596         122 MEYMPGGDLVNLMSNYD------------------IPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKL  183 (370)
T ss_pred             EcCCCCCcHHHHHHhcC------------------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEE
Confidence            99999999999987532                  7889999999999999999999999999996             7


Q ss_pred             cCCCcceeeecc----CCccccccccccccccccC----CCCcccceeE
Q psy12228        216 IGFDLCILVFFH----DSTLLKTTSTIASLILRNQ----KVSVLLDLIF  256 (258)
Q Consensus       216 ~dfgl~~~~~~~----~~~~~gt~~y~aPE~~~~~----~~s~~~Dv~~  256 (258)
                      +|||++......    .....||+.|+|||++.+.    .++.++||..
T Consensus       184 ~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwS  232 (370)
T cd05596         184 ADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS  232 (370)
T ss_pred             EeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeee
Confidence            899999865332    2356799999999998753    4789999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.96  E-value=1.1e-28  Score=214.95  Aligned_cols=162  Identities=19%  Similarity=0.237  Sum_probs=137.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...||+|+||.||++...     .++..||+|++....  .......+.+|+.+++.+ +||||+++++++.+++..++|
T Consensus        48 ~~~lG~G~fg~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv  121 (371)
T cd05622          48 VKVIGRGAFGEVQLVRHK-----STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMV  121 (371)
T ss_pred             EEEEeecCCeEEEEEEEC-----CCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEE
Confidence            348999999999999987     578899999986421  223345678999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++....                  +++..+..++.||+.||.|||+++|+|||||             +
T Consensus       122 ~Ey~~gg~L~~~~~~~~------------------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL  183 (371)
T cd05622         122 MEYMPGGDLVNLMSNYD------------------VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKL  183 (371)
T ss_pred             EcCCCCCcHHHHHHhcC------------------CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEE
Confidence            99999999999987532                  7889999999999999999999999999996             7


Q ss_pred             cCCCcceeeeccC----CccccccccccccccccCC----CCcccceeE
Q psy12228        216 IGFDLCILVFFHD----STLLKTTSTIASLILRNQK----VSVLLDLIF  256 (258)
Q Consensus       216 ~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~----~s~~~Dv~~  256 (258)
                      +|||+++......    ....||+.|+|||++.+..    ++.++||..
T Consensus       184 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwS  232 (371)
T cd05622         184 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS  232 (371)
T ss_pred             EeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceee
Confidence            8999998654321    3567999999999997643    789999854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.96  E-value=1.6e-28  Score=210.78  Aligned_cols=165  Identities=15%  Similarity=0.194  Sum_probs=137.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..||+|+||.||++....  ...++..||+|+++...   .....+.+..|+.++..+.+|+||+.+++++..++..++|
T Consensus         6 ~~lg~G~~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (332)
T cd05614           6 KVLGTGAYGKVFLVRKVT--GHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLI   83 (332)
T ss_pred             EEEeecCCEEEEEEEEcc--cCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEE
Confidence            379999999999998641  12367899999996421   2233456889999999996799999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             +
T Consensus        84 ~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl  146 (332)
T cd05614          84 LDYVSGGEMFTHLYQRDN-----------------FSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVL  146 (332)
T ss_pred             EeCCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEE
Confidence            999999999999987654                 8999999999999999999999999999996             7


Q ss_pred             cCCCcceeeeccC----CccccccccccccccccC-CCCccccee
Q psy12228        216 IGFDLCILVFFHD----STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      +|||+++......    ....||+.|+|||++.+. .++.++||.
T Consensus       147 ~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  191 (332)
T cd05614         147 TDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWW  191 (332)
T ss_pred             eeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccc
Confidence            8999987543222    356799999999999875 478999985

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=1.4e-28  Score=220.96  Aligned_cols=164  Identities=15%  Similarity=0.175  Sum_probs=138.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCc-eEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGI-ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .+ +..||+|.+... .......+.+|+.+++.+ +|||||++++++..++..+||||
T Consensus        73 ~~lg~G~~g~vy~a~~~-----~~~~~~vv~K~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~E  145 (478)
T PTZ00267         73 TLVGRNPTTAAFVATRG-----SDPKEKVVAKFVMLN-DERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLLLIME  145 (478)
T ss_pred             EEEEeCCCcEEEEEEEc-----CCCCeEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEEEEEE
Confidence            37999999999999876     34 578899987543 344456788899999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.++|.....             ...++++..+..++.||+.||.|||+++|+|||||             ++|
T Consensus       146 ~~~gg~L~~~l~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~D  212 (478)
T PTZ00267        146 YGSGGDLNKQIKQRLK-------------EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGD  212 (478)
T ss_pred             CCCCCCHHHHHHHHHh-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEe
Confidence            9999999998875322             12348999999999999999999999999999996             789


Q ss_pred             CCcceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....     ....+||+.|+|||++.+..++.++||.
T Consensus       213 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~  255 (478)
T PTZ00267        213 FGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMW  255 (478)
T ss_pred             CcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHH
Confidence            9999865432     2355799999999999999999999984

>KOG0577|consensus

Probab=99.96  E-value=5.8e-30  Score=222.44  Aligned_cols=159  Identities=18%  Similarity=0.294  Sum_probs=138.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||.|+||.||-+...     .+...||||.+.-..  +...-.++++|+..|+++ +|||+|.+.|||..+...|||||
T Consensus        33 EIGHGSFGAVYfArd~-----~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   33 EIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HhcCCccceeEEeecc-----CccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccchHHHHHH
Confidence            6999999999999987     678999999996432  223346799999999999 99999999999999889999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||-| +-.+.|.-+.                +++.+-.+..|+.+.+.||.|||+.+.||||||             ++|
T Consensus       107 YClG-SAsDlleVhk----------------KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaD  169 (948)
T KOG0577|consen  107 YCLG-SASDLLEVHK----------------KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLAD  169 (948)
T ss_pred             HHhc-cHHHHHHHHh----------------ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeecc
Confidence            9975 8888888766                359999999999999999999999999999995             789


Q ss_pred             CCcceeeeccCCccccccccccccccc---cCCCCccccee
Q psy12228        218 FDLCILVFFHDSTLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                      ||.|.. ..+.++++|||+|||||++.   .+.|+-++||-
T Consensus       170 FGSAsi-~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvW  209 (948)
T KOG0577|consen  170 FGSASI-MAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVW  209 (948)
T ss_pred             ccchhh-cCchhcccCCccccchhHheeccccccCCcccee
Confidence            998875 34457899999999999974   47999999984

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.96  E-value=1.2e-28  Score=207.56  Aligned_cols=161  Identities=17%  Similarity=0.271  Sum_probs=136.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|+++..........+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        11 ~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871          11 DKLGEGTYATVFKGRSK-----LTENLVALKEIRLEHEEGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             eEEecCCCEEEEEEEEC-----CCCCEEEEEEecccccCCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEeC
Confidence            38999999999999987     577899999997543333445678999999999 999999999999998899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++ +|.+++.....                .+++..+..++.||+.||+|||++||+|||||             ++||
T Consensus        85 ~~~-~l~~~l~~~~~----------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Df  147 (288)
T cd07871          85 LDS-DLKQYLDNCGN----------------LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADF  147 (288)
T ss_pred             CCc-CHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcC
Confidence            985 99999876542                37899999999999999999999999999995             7899


Q ss_pred             CcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      |+++......   ....+++.|+|||++.+ ..++.++||.
T Consensus       148 G~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw  188 (288)
T cd07871         148 GLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMW  188 (288)
T ss_pred             cceeeccCCCccccCceecccccChHHhcCCcccCcHHHHH
Confidence            9997644332   34577899999999865 5689999974

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.96  E-value=9.4e-29  Score=211.63  Aligned_cols=160  Identities=24%  Similarity=0.345  Sum_probs=134.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHH---HHhcCCCcccceeeeEEcCCcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMM---KMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l---~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ..||+|+||.||+|...     .++..||||+++...  .....+.+.+|+.++   +.+ +||||+++++++.+.+..+
T Consensus         5 ~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l-~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           5 AVLGRGHFGKVLLAEYK-----KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSE-RHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             EEEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcccc-CCCChhceeeEEEcCCEEE
Confidence            38999999999999987     578899999997431  223345677776665   456 7999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+++|+|..++...                  .+++..+..++.||+.||.|||++||+|||||            
T Consensus        79 lv~E~~~~~~L~~~~~~~------------------~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~  140 (324)
T cd05589          79 FVMEYAAGGDLMMHIHTD------------------VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFV  140 (324)
T ss_pred             EEEcCCCCCcHHHHhhcC------------------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcE
Confidence            999999999999887642                  28999999999999999999999999999995            


Q ss_pred             -ccCCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||+++.....   .....||+.|+|||++.+..++.++||.
T Consensus       141 kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Diw  185 (324)
T cd05589         141 KIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWW  185 (324)
T ss_pred             EeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchh
Confidence             7899998753222   2456799999999999999999999985

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=2e-28  Score=210.20  Aligned_cols=163  Identities=19%  Similarity=0.194  Sum_probs=137.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+++..     .+++.||+|++....  .......+.+|..++..+ +|+||+.+++++.+.+..++||
T Consensus         7 ~~lG~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           7 KVIGRGAFGEVAVVKMK-----HTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             EEEeeCCCeEEEEEEEC-----CCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence            48999999999999987     577899999996421  223345688899999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                .+++..+..++.|++.||+|||+++|+|||||             ++
T Consensus        81 Ey~~gg~L~~~l~~~~~----------------~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~  144 (331)
T cd05624          81 DYYVGGDLLTLLSKFED----------------RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLA  144 (331)
T ss_pred             eCCCCCcHHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEE
Confidence            99999999999987432                28999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC----Ccccccccccccccccc-----CCCCcccceeE
Q psy12228        217 GFDLCILVFFHD----STLLKTTSTIASLILRN-----QKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~s~~~Dv~~  256 (258)
                      |||++.......    ....||+.|+|||++.+     ..++.++||..
T Consensus       145 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwS  193 (331)
T cd05624         145 DFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWS  193 (331)
T ss_pred             eccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEe
Confidence            999987654322    24579999999999876     56889999854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.1e-28  Score=205.72  Aligned_cols=163  Identities=13%  Similarity=0.191  Sum_probs=138.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||++...     .++..||+|++....  .......+.+|+.+++.+ +||||+.+++++.+++..++||
T Consensus         6 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05605           6 RVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             EEEecCCCeEEEEEEEc-----CCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEE
Confidence            37999999999999986     577899999996532  122335678899999999 9999999999999988999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....               ..+++..+..++.|++.||.|||+++++|||||             ++
T Consensus        80 e~~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~  144 (285)
T cd05605          80 TLMNGGDLKFHIYNMGN---------------PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRIS  144 (285)
T ss_pred             eccCCCcHHHHHHhcCc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEe
Confidence            99999999998875432               238999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......  ....|++.|+|||++.+..++.++||.
T Consensus       145 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  185 (285)
T cd05605         145 DLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWW  185 (285)
T ss_pred             eCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccch
Confidence            999988643322  345789999999999998999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.6e-28  Score=210.92  Aligned_cols=162  Identities=18%  Similarity=0.206  Sum_probs=136.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCC--CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..||+|++...  ......+.+.+|+.++..+ +|+||+.+++++.+++.+++||
T Consensus         7 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           7 KVIGRGAFGEVAVVKMK-----NTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             EEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEEE
Confidence            38999999999999987     57789999999642  1233446688999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.+...                .+++..+..++.||+.||+|||+++|+|||||             ++
T Consensus        81 e~~~g~~L~~~l~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~  144 (331)
T cd05597          81 DYYVGGDLLTLLSKFED----------------RLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLA  144 (331)
T ss_pred             ecCCCCcHHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEE
Confidence            99999999999976432                28999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC----Ccccccccccccccccc-----CCCCccccee
Q psy12228        217 GFDLCILVFFHD----STLLKTTSTIASLILRN-----QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~s~~~Dv~  255 (258)
                      |||++.......    ....||+.|+|||++..     ..++.++||.
T Consensus       145 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw  192 (331)
T cd05597         145 DFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWW  192 (331)
T ss_pred             ECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceee
Confidence            999987643322    23568999999999873     4578899985

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.96  E-value=1.4e-28  Score=210.98  Aligned_cols=162  Identities=15%  Similarity=0.194  Sum_probs=138.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..||+|+++...  .......+.+|+.+++.+ +|+||+++++++.+.+..++||
T Consensus         7 ~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           7 SLVGRGHFGEVQVVREK-----ATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             EEEEeccCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEEE
Confidence            48999999999999987     577899999997532  223456688999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                .+++..+..++.||+.||.|||+++|+|||||             ++
T Consensus        81 e~~~~~~L~~~l~~~~~----------------~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~  144 (330)
T cd05601          81 EYQPGGDLLSLLNRYED----------------QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLA  144 (330)
T ss_pred             CCCCCCCHHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEec
Confidence            99999999999987632                28999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC----Cccccccccccccccc------cCCCCccccee
Q psy12228        217 GFDLCILVFFHD----STLLKTTSTIASLILR------NQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~----~~~~gt~~y~aPE~~~------~~~~s~~~Dv~  255 (258)
                      |||++.......    ....||+.|+|||++.      ...++.++||.
T Consensus       145 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw  193 (330)
T cd05601         145 DFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWW  193 (330)
T ss_pred             cCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceee
Confidence            999998654332    2357899999999987      46778999985

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0574|consensus

Probab=99.96  E-value=1.3e-30  Score=210.68  Aligned_cols=158  Identities=16%  Similarity=0.291  Sum_probs=143.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||++.++     .+|..||+|.+..+   .+.+++.+|+.+|+++ ..|++|++||.+.....+|||||||
T Consensus        40 KLGEGSYGSV~KAIH~-----EsG~v~AIK~VPV~---sDLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDLWIVMEYC  110 (502)
T KOG0574|consen   40 KLGEGSYGSVHKAIHR-----ESGHVLAIKKVPVD---TDLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDLWIVMEYC  110 (502)
T ss_pred             HhcCCcchHHHHHHHh-----ccCcEEEEEecCcc---chHHHHHHHHHHHHHc-CCchhhhhhhhhccCCceEeehhhc
Confidence            7999999999999998     78999999999743   5577899999999999 9999999999999888999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      .-|++.+.++.++                +++++.++..+....++||+|||...-||||||             ++|||
T Consensus       111 GAGSiSDI~R~R~----------------K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFG  174 (502)
T KOG0574|consen  111 GAGSISDIMRARR----------------KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFG  174 (502)
T ss_pred             CCCcHHHHHHHhc----------------CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhcc
Confidence            9999999998766                359999999999999999999999999999995             88999


Q ss_pred             cceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      .+..+...   .+++.|||.|||||++..-.|+.++||-
T Consensus       175 VAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIW  213 (502)
T KOG0574|consen  175 VAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIW  213 (502)
T ss_pred             ccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHh
Confidence            99865433   3789999999999999999999999973

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=9.5e-29  Score=212.08  Aligned_cols=161  Identities=17%  Similarity=0.208  Sum_probs=133.8

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhc--CCCcccceeeeEEcCCcEEEEE
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIG--QHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~--~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ||+|+||.||+|...     .++..||+|++....  .......+..|..++..+.  +||||+.+++++.+.+..++||
T Consensus         1 lG~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKK-----DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEEC-----CCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEE
Confidence            689999999999987     577899999996421  1223345667777777663  6999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             ++
T Consensus        76 e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~  138 (330)
T cd05586          76 DYMSGGELFWHLQKEGR-----------------FSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALC  138 (330)
T ss_pred             cCCCCChHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEe
Confidence            99999999999987654                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccC-CCCcccceeE
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQ-KVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~~  256 (258)
                      |||++......   .....||+.|+|||++.+. .++.++||.-
T Consensus       139 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Dvws  182 (330)
T cd05586         139 DFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWS  182 (330)
T ss_pred             cCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceec
Confidence            99998753322   2356799999999998764 4799999853

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0667|consensus

Probab=99.96  E-value=8.4e-29  Score=217.83  Aligned_cols=160  Identities=19%  Similarity=0.249  Sum_probs=143.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC-----CcccceeeeEEcCCcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH-----INIINLLGVCTQDGPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~nIv~l~~~~~~~~~~~  146 (258)
                      .+||+|+||.|.+|...     .+++.||||++++.  ..-..+-..|+.+|..+.+|     -|+|+++++|...+++|
T Consensus       192 e~LGkGtFGQVvk~~d~-----~T~e~VAIKIiKN~--k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc  264 (586)
T KOG0667|consen  192 EVLGKGSFGQVVKAYDH-----KTGEIVAIKIIKNK--KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC  264 (586)
T ss_pred             EEecccccceeEEEEec-----CCCcEEEEEeeccC--hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence            37999999999999998     78999999999874  34445677899999999535     39999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      ||+|.+.. +|+++|+.+..               ..++...++.++.||+.||.+||+.+|||+|||            
T Consensus       265 iVfELL~~-NLYellK~n~f---------------~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~  328 (586)
T KOG0667|consen  265 IVFELLST-NLYELLKNNKF---------------RGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRS  328 (586)
T ss_pred             eeehhhhh-hHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcC
Confidence            99999987 99999998775               459999999999999999999999999999995            


Q ss_pred             ---ccCCCcceeeeccCCccccccccccccccccCCCCcccce
Q psy12228        215 ---FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                         ++|||.|......-.+.+-+..|.|||++.|.+|+.+.||
T Consensus       329 ~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDm  371 (586)
T KOG0667|consen  329 RIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDM  371 (586)
T ss_pred             ceeEEecccccccCCcceeeeeccccccchhhccCCCCCccce
Confidence               8999999977666678889999999999999999999997

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=1.9e-28  Score=210.56  Aligned_cols=161  Identities=19%  Similarity=0.220  Sum_probs=140.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++...     .++..+|+|.++..........+.+|+.+++.+ +|+||++++++|.+++..++||||
T Consensus        11 ~~lg~g~~g~V~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~   84 (333)
T cd06650          11 SELGAGNGGVVFKVSHK-----PSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEH   84 (333)
T ss_pred             ccccCCCCEEEEEEEEC-----CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEEEEec
Confidence            37999999999999987     577899999998655555667899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~d  217 (258)
                      +++|+|.+++.....                 +++..+..++.|++.||.|||++ +|+|||||             ++|
T Consensus        85 ~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~D  147 (333)
T cd06650          85 MDGGSLDQVLKKAGR-----------------IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD  147 (333)
T ss_pred             CCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEee
Confidence            999999999987654                 89999999999999999999985 79999996             789


Q ss_pred             CCcceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++...... .....|+..|+|||++.+..++.++||.
T Consensus       148 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  186 (333)
T cd06650         148 FGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW  186 (333)
T ss_pred             CCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHH
Confidence            9998754322 2456789999999999998999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=2.5e-28  Score=206.98  Aligned_cols=160  Identities=18%  Similarity=0.258  Sum_probs=134.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|+++..........+.+|+.+++.+ +||||+++++++.++...++||||
T Consensus        11 ~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869          11 EKLGEGSYATVYKGKSK-----VNGKLVALKVIRLQEEEGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             eeEEecCCEEEEEEEEC-----CCCCEEEEEEeccccccccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEEEEEC
Confidence            48999999999999987     577899999997543333345678999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      ++ ++|.+++.....                .+++..+..++.|++.||.|||+++|+|||||             ++||
T Consensus        85 ~~-~~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Df  147 (303)
T cd07869          85 VH-TDLCQYMDKHPG----------------GLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADF  147 (303)
T ss_pred             CC-cCHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCC
Confidence            96 599888876532                38899999999999999999999999999996             7899


Q ss_pred             CcceeeeccC---Ccccccccccccccccc-CCCCcccce
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv  254 (258)
                      |+++......   ....+|+.|+|||++.+ ..++.++||
T Consensus       148 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  187 (303)
T cd07869         148 GLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDM  187 (303)
T ss_pred             CcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHH
Confidence            9987543222   34678899999999875 457889997

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0610|consensus

Probab=99.96  E-value=1.1e-28  Score=206.60  Aligned_cols=161  Identities=18%  Similarity=0.267  Sum_probs=140.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||.|.-|.||+++..     +++..+|+|++.+..  ..+...+...|-+||+.+ +||.++.+|+.+..+...|++||
T Consensus        84 ~LG~GdiG~VyL~~l~-----~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl~me  157 (459)
T KOG0610|consen   84 RLGCGDIGTVYLVELR-----GTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCLVME  157 (459)
T ss_pred             HcCCCCceeEEEEEec-----CCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEEEEe
Confidence            6899999999999998     577999999997643  334456788899999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||+||+|...++++..               +.+++..++.|+..++.||+|||-.|||.||||             ++|
T Consensus       158 yCpGGdL~~LrqkQp~---------------~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsD  222 (459)
T KOG0610|consen  158 YCPGGDLHSLRQKQPG---------------KRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSD  222 (459)
T ss_pred             cCCCccHHHHHhhCCC---------------CccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeee
Confidence            9999999999888764               669999999999999999999999999999998             678


Q ss_pred             CCcceeeec-----------------------------------c------------------------CCccccccccc
Q psy12228        218 FDLCILVFF-----------------------------------H------------------------DSTLLKTTSTI  238 (258)
Q Consensus       218 fgl~~~~~~-----------------------------------~------------------------~~~~~gt~~y~  238 (258)
                      |+|+.....                                   .                        ...++||-.|+
T Consensus       223 FDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYl  302 (459)
T KOG0610|consen  223 FDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYL  302 (459)
T ss_pred             ccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccc
Confidence            877633100                                   0                        12568999999


Q ss_pred             cccccccCCCCcccce
Q psy12228        239 ASLILRNQKVSVLLDL  254 (258)
Q Consensus       239 aPE~~~~~~~s~~~Dv  254 (258)
                      |||++.|..++.++||
T Consensus       303 APEvI~G~GHgsAVDW  318 (459)
T KOG0610|consen  303 APEVIRGEGHGSAVDW  318 (459)
T ss_pred             cceeeecCCCCchhhH
Confidence            9999999999999997

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=3.7e-28  Score=208.67  Aligned_cols=163  Identities=18%  Similarity=0.208  Sum_probs=136.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||++...     .++..+|+|++....  .......+.+|+.++..+ +|+||+.+++++.+.+..++||
T Consensus         7 ~~lG~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           7 KVIGRGAFGEVAVVKLK-----NADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             EEEEeCCCeEEEEEEEC-----CCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEEE
Confidence            48999999999999987     567899999996421  223345588899999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.+...                .+++..+..++.||+.||.|||+++|+|||||             ++
T Consensus        81 ey~~~g~L~~~l~~~~~----------------~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~  144 (332)
T cd05623          81 DYYVGGDLLTLLSKFED----------------RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLA  144 (332)
T ss_pred             eccCCCcHHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEe
Confidence            99999999999987432                28999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC----Cccccccccccccccc-----cCCCCcccceeE
Q psy12228        217 GFDLCILVFFHD----STLLKTTSTIASLILR-----NQKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~~----~~~~gt~~y~aPE~~~-----~~~~s~~~Dv~~  256 (258)
                      |||++.......    ....||+.|+|||++.     ...++.++||..
T Consensus       145 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwS  193 (332)
T cd05623         145 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWS  193 (332)
T ss_pred             ecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEe
Confidence            999987543222    2457999999999986     356899999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.96  E-value=4.3e-28  Score=209.92  Aligned_cols=157  Identities=18%  Similarity=0.241  Sum_probs=131.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||||++...........+.+|+++++.+ +|+||+++++++...+.+++||||
T Consensus        80 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         80 NRIGSGAGGTVYKVIHR-----PTGRLYALKVIYGNHEDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             hhccCCCCeEEEEEEEC-----CCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeEEEEEec
Confidence            37999999999999987     577899999997654555667899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|...    .                 ..++..+..++.||+.||.|||+++|+|||||             ++||
T Consensus       154 ~~~~~L~~~----~-----------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~Df  212 (353)
T PLN00034        154 MDGGSLEGT----H-----------------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADF  212 (353)
T ss_pred             CCCCccccc----c-----------------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccc
Confidence            999998542    1                 15678888999999999999999999999995             7899


Q ss_pred             CcceeeeccC---Ccccccccccccccccc-----CCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRN-----QKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~-----~~~s~~~Dv~  255 (258)
                      |+++......   ....||..|+|||++..     ...+.++||.
T Consensus       213 G~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Dvw  257 (353)
T PLN00034        213 GVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIW  257 (353)
T ss_pred             ccceecccccccccccccCccccCccccccccccCcCCCcchhHH
Confidence            9998654321   35689999999999853     2335688874

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=2.9e-28  Score=204.73  Aligned_cols=161  Identities=16%  Similarity=0.260  Sum_probs=135.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|..+     .++..||+|+++... .....+.+.+|+.+++.+ +||||+++++++..++..++|||
T Consensus         7 ~~lg~g~~~~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           7 GVVGEGAYGVVLKCRHK-----ETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             EEecccCCEEEEEEEEC-----CCCcEEEEEEEecccccccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEEEe
Confidence            37999999999999987     577899999997542 233456788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |++++.+..+.....                 .+++..+..++.|++.||.|||+++|+|||||             ++|
T Consensus        81 ~~~~~~l~~~~~~~~-----------------~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~D  143 (287)
T cd07848          81 YVEKNMLELLEEMPN-----------------GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCD  143 (287)
T ss_pred             cCCCCHHHHHHhcCC-----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEee
Confidence            999866654433322                 38999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......    ....||+.|+|||++.+..++.++||-
T Consensus       144 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  185 (287)
T cd07848         144 FGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMW  185 (287)
T ss_pred             ccCcccccccccccccccccccccCCcHHHcCCCCCCchhHH
Confidence            99998653322    345789999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0690|consensus

Probab=99.96  E-value=1.3e-29  Score=206.85  Aligned_cols=163  Identities=21%  Similarity=0.299  Sum_probs=146.0

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      +.-.+||+|.||+|.+++-+     .+++.+|+|+++++.  ..++...-+.|-++|+.. +||.+..+...|.+.+.+|
T Consensus       171 dfLKvLGkGTFGKVIL~rEK-----at~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt~drlC  244 (516)
T KOG0690|consen  171 DFLKVLGKGTFGKVILCREK-----ATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQTQDRLC  244 (516)
T ss_pred             hHHHHhcCCccceEEEEeec-----ccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhccCceEE
Confidence            44457999999999999988     789999999998764  455667788999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||..||.|..+|.+.+.                 +++...+.+...|+.||.|||+++||.||||            
T Consensus       245 FVMeyanGGeLf~HLsrer~-----------------FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHI  307 (516)
T KOG0690|consen  245 FVMEYANGGELFFHLSRERV-----------------FSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHI  307 (516)
T ss_pred             EEEEEccCceEeeehhhhhc-----------------ccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCce
Confidence            99999999999999988765                 9999999999999999999999999999985            


Q ss_pred             -ccCCCcceeee-c--cCCccccccccccccccccCCCCcccce
Q psy12228        215 -FIGFDLCILVF-F--HDSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 -i~dfgl~~~~~-~--~~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                       |+|||+|+.-. .  ...+++|||.|+|||++.+..|+.++||
T Consensus       308 KitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDW  351 (516)
T KOG0690|consen  308 KITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDW  351 (516)
T ss_pred             EeeecccchhcccccceeccccCChhhcCchhhccccccceeeh
Confidence             88999998522 2  2378999999999999999999999997

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=3.8e-28  Score=203.40  Aligned_cols=161  Identities=17%  Similarity=0.196  Sum_probs=136.0

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ||+|+||.||++...     .++..+|+|++....  .......+..|+++++.+ +||||+++++++.++...++||||
T Consensus         1 lg~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~   74 (277)
T cd05607           1 LGKGGFGEVCAVQVK-----NTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSL   74 (277)
T ss_pred             CCCCCceEEEEEEEc-----cCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEec
Confidence            689999999999987     578999999996422  112234566799999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....               ..+++..+..++.|++.||+|||+++|+|||||             ++||
T Consensus        75 ~~g~~L~~~~~~~~~---------------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Df  139 (277)
T cd05607          75 MNGGDLKYHIYNVGE---------------RGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDL  139 (277)
T ss_pred             CCCCCHHHHHHhccc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeec
Confidence            999999998876443               348999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......  ....|++.|+|||++.+..++.++||.
T Consensus       140 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  178 (277)
T cd05607         140 GLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWF  178 (277)
T ss_pred             eeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHH
Confidence            9987654332  345788999999999998999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.96  E-value=1e-27  Score=201.56  Aligned_cols=163  Identities=15%  Similarity=0.187  Sum_probs=138.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .+++.||+|.+....  .......+.+|+.+++.+ +|+||+.+++++.+++..+++|
T Consensus         6 ~~lg~G~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05632           6 RVLGKGGFGEVCACQVR-----ATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVL   79 (285)
T ss_pred             EEEecCCCeEEEEEEEC-----CCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEE
Confidence            37999999999999987     578899999996532  122335678899999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....               ..+++..+..++.|++.||.|||+++|+|||||             ++
T Consensus        80 e~~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~  144 (285)
T cd05632          80 TIMNGGDLKFHIYNMGN---------------PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRIS  144 (285)
T ss_pred             EeccCccHHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEe
Confidence            99999999998876432               238999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......  ....|+..|+|||++.+..++.++||.
T Consensus       145 Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~  185 (285)
T cd05632         145 DLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYW  185 (285)
T ss_pred             cCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchH
Confidence            999987543322  346789999999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0585|consensus

Probab=99.96  E-value=1.1e-28  Score=209.67  Aligned_cols=161  Identities=18%  Similarity=0.237  Sum_probs=129.7

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-------------hHHHHHHHHHHHHHHHhcCCCcccceee
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-------------DAEMMDLVSEMEMMKMIGQHINIINLLG  137 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~E~~~l~~l~~h~nIv~l~~  137 (258)
                      ...||+|.||+|-+|...     .++..||||++.+..-             ....+.+.+|+.+|+++ +|||||+|+.
T Consensus       102 ~~eiG~G~yGkVkLar~~-----~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV~LiE  175 (576)
T KOG0585|consen  102 IKEIGSGQYGKVKLARDE-----VDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVVKLIE  175 (576)
T ss_pred             hhhhcCCccceEEEEeec-----CCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCeeEEEE
Confidence            346899999999999987     6889999999964311             11235789999999999 9999999999


Q ss_pred             eEEcC--CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-
Q psy12228        138 VCTQD--GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-  214 (258)
Q Consensus       138 ~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-  214 (258)
                      +..+.  +.+|||+|||..|.+.+.=...                 ..+++.+++.|+++++.||+|||.+|||||||| 
T Consensus       176 vLDDP~s~~~YlVley~s~G~v~w~p~d~-----------------~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKP  238 (576)
T KOG0585|consen  176 VLDDPESDKLYLVLEYCSKGEVKWCPPDK-----------------PELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKP  238 (576)
T ss_pred             eecCcccCceEEEEEeccCCccccCCCCc-----------------ccccHHHHHHHHHHHHHHHHHHHhcCeeccccch
Confidence            98764  4799999999998876432221                 128999999999999999999999999999995 


Q ss_pred             ------------ccCCCcceeeeccC--------CccccccccccccccccC---CC-Ccccce
Q psy12228        215 ------------FIGFDLCILVFFHD--------STLLKTTSTIASLILRNQ---KV-SVLLDL  254 (258)
Q Consensus       215 ------------i~dfgl~~~~~~~~--------~~~~gt~~y~aPE~~~~~---~~-s~~~Dv  254 (258)
                                  |+|||.+.....+.        ...+|||.|||||+..++   .+ +.+.||
T Consensus       239 sNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~Di  302 (576)
T KOG0585|consen  239 SNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDI  302 (576)
T ss_pred             hheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhh
Confidence                        88999998663221        357999999999998773   33 466665

>PHA02988 hypothetical protein; Provisional

Probab=99.96  E-value=7e-28  Score=202.50  Aligned_cols=159  Identities=16%  Similarity=0.179  Sum_probs=136.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~  145 (258)
                      ..||+|++|.||+|.+.       +..||||+++....  ....+.+.+|+.+|+++ +||||++++|++.+    ....
T Consensus        26 ~~i~~g~~~~v~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~   97 (283)
T PHA02988         26 VLIKENDQNSIYKGIFN-------NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRL   97 (283)
T ss_pred             eEEeeCCceEEEEEEEC-------CEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCce
Confidence            47899999999999985       48899999975422  22246788999999999 99999999999876    3468


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK----------  214 (258)
                      ++||||+++|+|.+++.....                 +++.....++.|++.||.|||+. +++|||||          
T Consensus        98 ~lv~Ey~~~g~L~~~l~~~~~-----------------~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~  160 (283)
T PHA02988         98 SLILEYCTRGYLREVLDKEKD-----------------LSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY  160 (283)
T ss_pred             EEEEEeCCCCcHHHHHhhCCC-----------------CChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC
Confidence            999999999999999987554                 89999999999999999999984 99999995          


Q ss_pred             ---ccCCCcceeeeccCCcccccccccccccccc--CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHDSTLLKTTSTIASLILRN--QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~Dv~  255 (258)
                         ++|||+++..........+++.|+|||++.+  ..++.++||.
T Consensus       161 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~  206 (283)
T PHA02988        161 KLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIY  206 (283)
T ss_pred             cEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhh
Confidence               7899999865555556788999999999976  6899999984

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.96  E-value=1.1e-27  Score=201.38  Aligned_cols=163  Identities=14%  Similarity=0.187  Sum_probs=138.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||++...     .+++.||+|.+....  .......+.+|+.+++.+ +|+||+.+++.+.+.+..++||
T Consensus         6 ~~ig~G~~g~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05630           6 RVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             EEeecCCCeEEEEEEEc-----CCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEE
Confidence            37999999999999998     678999999986532  222335678899999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....               ..+++..+..++.|++.||.|||+++|+|||||             ++
T Consensus        80 e~~~g~~L~~~l~~~~~---------------~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~  144 (285)
T cd05630          80 TLMNGGDLKFHIYHMGE---------------AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRIS  144 (285)
T ss_pred             EecCCCcHHHHHHHhcc---------------cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEe
Confidence            99999999999865432               238999999999999999999999999999996             68


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......  ....|+..|+|||++.+..++.++||.
T Consensus       145 Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Diw  185 (285)
T cd05630         145 DLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWW  185 (285)
T ss_pred             eccceeecCCCccccCCCCCccccChHHHcCCCCCCccccH
Confidence            999987543322  345789999999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.96  E-value=7.9e-28  Score=201.62  Aligned_cols=181  Identities=30%  Similarity=0.398  Sum_probs=143.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...+.........||+|.++..........|.+|+.++..+ +||||+++++++...+..+++|||+
T Consensus        12 ~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e~~   90 (283)
T cd05048          12 ELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKEQPTCMLFEYL   90 (283)
T ss_pred             cccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCCCceEEEEecC
Confidence            799999999999998643333455789999998665566667899999999999 9999999999999888999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++........... ..........+++..+..++.|++.||.|||+++++|+|||             ++|||
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg  169 (283)
T cd05048          91 AHGDLHEFLVRNSPHSDVGA-ESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFG  169 (283)
T ss_pred             CCCcHHHHHHhcCCCccccc-ccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCc
Confidence            99999999987542110000 00001112458999999999999999999999999999996             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++.....+     ....+++.|+|||++.+..++.++||.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~  210 (283)
T cd05048         170 LSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIW  210 (283)
T ss_pred             ceeeccccccccccCCCcccccccCHHHhccCcCchhhhHH
Confidence            987543322     234567889999999988999999984

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0199|consensus

Probab=99.95  E-value=6.9e-29  Score=219.18  Aligned_cols=163  Identities=29%  Similarity=0.379  Sum_probs=142.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|.||.|+.|.|..  ..++...||||+++...-.....+|++|+.+|.++ +|+|+++|||+..+ ..+.+|+|++
T Consensus       117 ~LG~GsFgvV~rg~Wt~--psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L-~H~hliRLyGvVl~-qp~mMV~ELa  192 (1039)
T KOG0199|consen  117 LLGEGSFGVVKRGTWTQ--PSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL-QHPHLIRLYGVVLD-QPAMMVFELA  192 (1039)
T ss_pred             HhcCcceeeEeeccccC--CCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc-cCcceeEEeeeecc-chhhHHhhhc
Confidence            78999999999999984  34566889999998876555778999999999999 99999999999987 5788999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~dfg  219 (258)
                      +.|+|.+.|++...               ..|....+..|+.|||.||.||.++++|||||             ||+|||
T Consensus       193 plGSLldrLrka~~---------------~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFG  257 (1039)
T KOG0199|consen  193 PLGSLLDRLRKAKK---------------AILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFG  257 (1039)
T ss_pred             ccchHHHHHhhccc---------------cceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeeccc
Confidence            99999999998322               34889999999999999999999999999998             899999


Q ss_pred             cceeeeccCCcccc------ccccccccccccCCCCcccce
Q psy12228        220 LCILVFFHDSTLLK------TTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       220 l~~~~~~~~~~~~g------t~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      |.+.+...+..+.-      -..|.|||.++..+++.+|||
T Consensus       258 LmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDv  298 (1039)
T KOG0199|consen  258 LMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDV  298 (1039)
T ss_pred             ceeccCCCCcceEecCCCcCcccccCHhHhccccccccchh
Confidence            99987766532222      256999999999999999997

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=4.8e-28  Score=212.19  Aligned_cols=155  Identities=17%  Similarity=0.163  Sum_probs=134.1

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ....||+|+||.||++...     .+++.||+|....       ..+.+|+.+++.+ +||||+++++++..+...++++
T Consensus        96 ~~~~lg~G~~g~V~~~~d~-----~~~~~vaiK~~~~-------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~  162 (391)
T PHA03212         96 ILETFTPGAEGFAFACIDN-----KTCEHVVIKAGQR-------GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTCLIL  162 (391)
T ss_pred             EEEEEcCCCCeEEEEEEEC-----CCCCEEEEechhh-------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeEEEE
Confidence            3447999999999999987     6788999997542       3467899999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      |++. ++|..++.....                 +++..++.++.||+.||.|||+++|+|||||             ++
T Consensus       163 e~~~-~~L~~~l~~~~~-----------------l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~  224 (391)
T PHA03212        163 PRYK-TDLYCYLAAKRN-----------------IAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLG  224 (391)
T ss_pred             ecCC-CCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEE
Confidence            9996 599999877654                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc----CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....    .....||+.|+|||++.+..++.++||.
T Consensus       225 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  267 (391)
T PHA03212        225 DFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIW  267 (391)
T ss_pred             eCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHH
Confidence            99998743221    1356899999999999999999999974

>KOG0660|consensus

Probab=99.95  E-value=9.1e-29  Score=204.11  Aligned_cols=160  Identities=20%  Similarity=0.311  Sum_probs=138.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-----CCcE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-----DGPL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-----~~~~  145 (258)
                      ..||+|+||.|..+..+     .++..||||.+.... ..-..++..+|+.+|+.+ +|+||+.+++++..     -+.+
T Consensus        28 ~~iG~GAyGvVcsA~~~-----~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p~~~~~f~Dv  101 (359)
T KOG0660|consen   28 EPIGRGAYGVVCSAKDK-----RTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRPPSRDKFNDV  101 (359)
T ss_pred             ccccCcceeeEEEEEEc-----CCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-cCCCcceEEeeccccccccccee
Confidence            37999999999999998     688999999997432 344567899999999999 89999999999876     2469


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      |+|+|+|+. +|.+.++....                 ++...+..++.||+.||.|+|+.+|+|||||           
T Consensus       102 YiV~elMet-DL~~iik~~~~-----------------L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~  163 (359)
T KOG0660|consen  102 YLVFELMET-DLHQIIKSQQD-----------------LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCD  163 (359)
T ss_pred             EEehhHHhh-HHHHHHHcCcc-----------------ccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCC
Confidence            999999975 99999988655                 9999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeec----cC-Cccccccccccccccc-cCCCCccccee
Q psy12228        215 --FIGFDLCILVFF----HD-STLLKTTSTIASLILR-NQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~----~~-~~~~gt~~y~aPE~~~-~~~~s~~~Dv~  255 (258)
                        |+|||+|+....    .. ...+.|.+|.|||++. ...|+.++||=
T Consensus       164 lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiW  212 (359)
T KOG0660|consen  164 LKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIW  212 (359)
T ss_pred             EEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhh
Confidence              889999998743    12 5778899999999975 47899999974

>KOG3653|consensus

Probab=99.95  E-value=9.7e-29  Score=209.86  Aligned_cols=145  Identities=22%  Similarity=0.374  Sum_probs=126.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhc-CCCcccceeeeEEcCC----cEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG-QHINIINLLGVCTQDG----PLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-~h~nIv~l~~~~~~~~----~~~  146 (258)
                      .+||+|.||.||+|.+.+       +.||||++.    ..+.+.|.+|-++++..+ +|+||++++++-....    .++
T Consensus       216 eli~~Grfg~V~KaqL~~-------~~VAVKifp----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  216 ELIGRGRFGCVWKAQLDN-------RLVAVKIFP----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             HHhhcCccceeehhhccC-------ceeEEEecC----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            378999999999999873       899999995    456678999988887643 8999999999876544    799


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC---------CccccCcc---
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR---------KVGNDAVR---  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---------~iiH~DlK---  214 (258)
                      ||+||.+.|+|.+||+.+-                  ++|.....++..+++||+|||+-         .|+|||||   
T Consensus       285 LVt~fh~kGsL~dyL~~nt------------------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkN  346 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKANT------------------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKN  346 (534)
T ss_pred             EEeeeccCCcHHHHHHhcc------------------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccc
Confidence            9999999999999999865                  89999999999999999999973         79999997   


Q ss_pred             ----------ccCCCcceeeeccC-----Ccccccccccccccccc
Q psy12228        215 ----------FIGFDLCILVFFHD-----STLLKTTSTIASLILRN  245 (258)
Q Consensus       215 ----------i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~  245 (258)
                                |+|||||..+....     ...+||.+|||||++.+
T Consensus       347 VLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEg  392 (534)
T KOG3653|consen  347 VLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEG  392 (534)
T ss_pred             eEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhh
Confidence                      89999999876543     35799999999999987

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=9.5e-28  Score=206.15  Aligned_cols=160  Identities=18%  Similarity=0.318  Sum_probs=133.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-----cE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-----PL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-----~~  145 (258)
                      .+||+|+||.||+|...     .++..||||.++... .......+.+|+.+++.+ +||||+++++++....     .+
T Consensus         6 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~   79 (338)
T cd07859           6 EVIGKGSYGVVCSAIDT-----HTGEKVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKDI   79 (338)
T ss_pred             EEEeecCCeEEEEEEEC-----CCCCEEEEEEechhhccchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCceE
Confidence            38999999999999987     578899999997432 233445788999999999 9999999999886432     48


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++||||+. ++|.+++.....                 +++..+..++.||+.||.|||+++|+|||||           
T Consensus        80 ~lv~e~~~-~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~  141 (338)
T cd07859          80 YVVFELME-SDLHQVIKANDD-----------------LTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCK  141 (338)
T ss_pred             EEEEecCC-CCHHHHHHhccc-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc
Confidence            99999996 599999987654                 8999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeeccC------Ccccccccccccccccc--CCCCccccee
Q psy12228        215 --FIGFDLCILVFFHD------STLLKTTSTIASLILRN--QKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~--~~~s~~~Dv~  255 (258)
                        ++|||+++......      ....||+.|+|||++.+  ..++.++||.
T Consensus       142 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~Dvw  192 (338)
T cd07859         142 LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIW  192 (338)
T ss_pred             EEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHH
Confidence              78999997543221      24578999999999876  6789999974

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.95  E-value=8.8e-28  Score=204.86  Aligned_cols=166  Identities=22%  Similarity=0.313  Sum_probs=136.2

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.+... .......||+|+++........+++.+|+.+++.+ +||||++++|+|... ..++++|
T Consensus        12 ~~~lg~G~~g~Vy~~~~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~~~~v~e   88 (316)
T cd05108          12 IKVLGSGAFGTVYKGLWIPE-GEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQ   88 (316)
T ss_pred             eeeeecCCCceEEEEEEecC-CCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-Cceeeee
Confidence            34899999999999997521 11223469999998654556667899999999999 999999999999765 5679999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..+..++.||+.||+|||+++|+|||||             ++|
T Consensus        89 ~~~~g~l~~~l~~~~~----------------~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~D  152 (316)
T cd05108          89 LMPFGCLLDYVREHKD----------------NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITD  152 (316)
T ss_pred             cCCCCCHHHHHHhccc----------------cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcc
Confidence            9999999999987542                28899999999999999999999999999995             789


Q ss_pred             CCcceeeeccCC-----ccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHDS-----TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.......     ...++..|+|||++.+..++.++||.
T Consensus       153 fG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~  195 (316)
T cd05108         153 FGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW  195 (316)
T ss_pred             ccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhH
Confidence            999986543321     22335689999999999999999985

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.95  E-value=1.1e-27  Score=210.42  Aligned_cols=184  Identities=31%  Similarity=0.486  Sum_probs=143.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.+++......+..||+|+++........+.+.+|+.+|..+..||||++++++|...+..++||||
T Consensus        43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~  122 (401)
T cd05107          43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEY  122 (401)
T ss_pred             hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEec
Confidence            37999999999999987543334567899999986545555567999999999994499999999999998899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCC------------------------------------------------------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYE------------------------------------------------------------  171 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~------------------------------------------------------------  171 (258)
                      +++|+|.++++.........                                                            
T Consensus       123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (401)
T cd05107         123 CRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYA  202 (401)
T ss_pred             cCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhh
Confidence            99999999998653210000                                                            


Q ss_pred             ---------------------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        172 ---------------------SPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       172 ---------------------~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                                           ............+++..++.++.||+.||.|||+++++|||||             ++|
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~D  282 (401)
T cd05107         203 DIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD  282 (401)
T ss_pred             hhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEe
Confidence                                 0000011233468899999999999999999999999999996             689


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....++..|+|||++.+..++.++||.
T Consensus       283 fGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  325 (401)
T cd05107         283 FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVW  325 (401)
T ss_pred             cCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHH
Confidence            99987543221     234567889999999998899999983

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG4279|consensus

Probab=99.95  E-value=2.1e-28  Score=216.10  Aligned_cols=163  Identities=21%  Similarity=0.335  Sum_probs=141.6

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...-+||+|.||.||-|+..     .+...+|||.+... .....+-+..|+...+.+ +|.|||+++|.+..++.+-|.
T Consensus       578 ~ervVLGKGTYG~VYA~RD~-----~tqvrIaIKEIpek-dsr~~QPLhEEIaLH~~L-rHkNIVrYLGs~senGf~kIF  650 (1226)
T KOG4279|consen  578 NERVVLGKGTYGTVYAARDM-----DTQVRIAIKEIPEK-DSREVQPLHEEIALHSTL-RHKNIVRYLGSVSENGFFKIF  650 (1226)
T ss_pred             CceEEeecCceeEEEeeccc-----cceeEEEeeecccc-cchhhccHHHHHHHHHHH-hhHhHHHHhhccCCCCeEEEE
Confidence            44457999999999999988     68899999999765 444556688999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVL--TEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      ||..+||+|...|+..-.                ++  .+..+-.+..||+.||.|||++.|||||||            
T Consensus       651 MEqVPGGSLSsLLrskWG----------------PlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGv  714 (1226)
T KOG4279|consen  651 MEQVPGGSLSSLLRSKWG----------------PLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGV  714 (1226)
T ss_pred             eecCCCCcHHHHHHhccC----------------CCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccce
Confidence            999999999999987543                24  788899999999999999999999999995            


Q ss_pred             --ccCCCcceeeecc---CCcccccccccccccccc--CCCCcccce
Q psy12228        215 --FIGFDLCILVFFH---DSTLLKTTSTIASLILRN--QKVSVLLDL  254 (258)
Q Consensus       215 --i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~--~~~s~~~Dv  254 (258)
                        |+|||-++.+..-   ..++.||..|||||++..  ..|+.++||
T Consensus       715 lKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADI  761 (1226)
T KOG4279|consen  715 LKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADI  761 (1226)
T ss_pred             EEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhh
Confidence              8999998864332   368999999999999975  478888986

>KOG0607|consensus

Probab=99.95  E-value=1.2e-28  Score=200.57  Aligned_cols=168  Identities=16%  Similarity=0.236  Sum_probs=144.5

Q ss_pred             eeeeceeeeccceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeee
Q psy12228         59 LINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV  138 (258)
Q Consensus        59 ~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~  138 (258)
                      |.++.++|.    .+||+|+|+.|-.+...     .++.++|||++.+. ....+.++.+|++++.++..|+||++++.+
T Consensus        75 F~d~YkLt~----e~LGeGAyasVqtcv~i-----~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLief  144 (463)
T KOG0607|consen   75 FEDMYKLTS----ELLGEGAYASVQTCVSI-----QTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEF  144 (463)
T ss_pred             HHHHHHhHH----HHhcCccceeeeeeeee-----ccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHH
Confidence            456555553    38999999999999877     68899999999887 556678999999999999899999999999


Q ss_pred             EEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----
Q psy12228        139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----  214 (258)
Q Consensus       139 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----  214 (258)
                      |+++...|||||-|.||+|...|.++..                 +++.++..+..+|+.||+|||.+||.|||||    
T Consensus       145 FEdd~~FYLVfEKm~GGplLshI~~~~~-----------------F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENi  207 (463)
T KOG0607|consen  145 FEDDTRFYLVFEKMRGGPLLSHIQKRKH-----------------FNEREASRVVKDIASALDFLHTKGIAHRDLKPENI  207 (463)
T ss_pred             hcccceEEEEEecccCchHHHHHHHhhh-----------------ccHHHHHHHHHHHHHHHHHHhhcCcccccCCccce
Confidence            9999999999999999999999999877                 9999999999999999999999999999995    


Q ss_pred             ------------ccCCCcceeeeccC----------Ccccccccccccccccc-----CCCCcccc
Q psy12228        215 ------------FIGFDLCILVFFHD----------STLLKTTSTIASLILRN-----QKVSVLLD  253 (258)
Q Consensus       215 ------------i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~-----~~~s~~~D  253 (258)
                                  |+||+++.-.....          .+.+|+..|||||+..-     -.|+.++|
T Consensus       208 LC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCD  273 (463)
T KOG0607|consen  208 LCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCD  273 (463)
T ss_pred             eecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhcccccccccccc
Confidence                        88998876433221          36788999999999632     35677776

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.95  E-value=2.2e-27  Score=201.72  Aligned_cols=161  Identities=18%  Similarity=0.197  Sum_probs=140.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++...     .++..+|+|.++..........+.+|++++..+ +||||+++++++.+++.++++|||
T Consensus         7 ~~lg~G~~g~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           7 GELGAGNGGVVTKVLHR-----PSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             eeccCCCCeEEEEEEEc-----CCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEeec
Confidence            47999999999999987     577889999997654555567799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------------i~d  217 (258)
                      +++++|.+++.....                 +++..+..++.|++.||.|||+ .+++|+|||             ++|
T Consensus        81 ~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~d  143 (308)
T cd06615          81 MDGGSLDQVLKKAGR-----------------IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD  143 (308)
T ss_pred             cCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEcc
Confidence            999999999987654                 8999999999999999999998 599999995             789


Q ss_pred             CCcceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++...... .....++..|+|||++.+..++.++||.
T Consensus       144 fg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Diw  182 (308)
T cd06615         144 FGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIW  182 (308)
T ss_pred             CCCcccccccccccCCCCcCccChhHhcCCCCCccchHH
Confidence            9988754322 2456788999999999988899999974

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.95  E-value=2.5e-27  Score=200.92  Aligned_cols=170  Identities=36%  Similarity=0.504  Sum_probs=141.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||++...+.....++..||+|+++........+.+.+|+.+++++.+||||+++++++...+..+++||
T Consensus        40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e  119 (302)
T cd05055          40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE  119 (302)
T ss_pred             cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEE
Confidence            34899999999999986433333566789999998654555567899999999999679999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....               ..+++.++..++.|++.||.|||+++|+|+|||             ++|
T Consensus       120 ~~~~~~L~~~i~~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~d  184 (302)
T cd05055         120 YCCYGDLLNFLRRKRE---------------SFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICD  184 (302)
T ss_pred             cCCCCcHHHHHHhCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECC
Confidence            9999999999976432               238999999999999999999999999999996             689


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....++..|+|||++.+..++.++||.
T Consensus       185 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  227 (302)
T cd05055         185 FGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW  227 (302)
T ss_pred             CcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHH
Confidence            99987543322     123456789999999998999999973

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.95  E-value=1.6e-27  Score=196.54  Aligned_cols=161  Identities=27%  Similarity=0.340  Sum_probs=136.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|.+...........+.+|+++++.+ +||||+++++++...+..++||||+
T Consensus         2 ~lg~g~~g~vy~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   75 (252)
T cd05084           2 RIGRGNFGEVFSGRLR-----ADNTPVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELV   75 (252)
T ss_pred             ccCcccCccEEEEEEe-----cCCceEEEEecCccCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeec
Confidence            6899999999999987     567899999987655556667899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++.....                .+++..++.++.|++.||.|||+++++|||||             ++|||
T Consensus        76 ~~~~L~~~~~~~~~----------------~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg  139 (252)
T cd05084          76 QGGDFLTFLRTEGP----------------RLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFG  139 (252)
T ss_pred             cCCcHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccc
Confidence            99999999976432                38999999999999999999999999999985             78999


Q ss_pred             cceeeeccCC-----ccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHDS-----TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++........     ....+..|+|||.+.+..++.++||.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  180 (252)
T cd05084         140 MSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVW  180 (252)
T ss_pred             cCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHH
Confidence            9875432211     11223569999999998999999974

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.95  E-value=2.3e-27  Score=198.33  Aligned_cols=176  Identities=26%  Similarity=0.354  Sum_probs=140.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...+.....++..||+|+++..........+.+|+.+++.+ +||||+++++++...+..++||||
T Consensus        12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~e~   90 (277)
T cd05062          12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIMEL   90 (277)
T ss_pred             eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCeEEEEec
Confidence            4899999999999988654444566889999997654445566799999999999 999999999999988999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.........       ......+++..+..++.|++.||.|||+++++|||||             ++||
T Consensus        91 ~~~~~L~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~df  163 (277)
T cd05062          91 MTRGDLKSYLRSLRPEMEN-------NPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF  163 (277)
T ss_pred             CCCCCHHHHHHHcCccccc-------cccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCC
Confidence            9999999999764321000       0001246888999999999999999999999999996             7899


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......     ....+++.|+|||++.+..++.++||.
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  205 (277)
T cd05062         164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW  205 (277)
T ss_pred             CCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHH
Confidence            9887543222     223456789999999998999999974

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0200|consensus

Probab=99.95  E-value=1e-27  Score=220.11  Aligned_cols=182  Identities=42%  Similarity=0.569  Sum_probs=147.8

Q ss_pred             eeeeecCceEEEEEEEcccccCC--ceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQG--IITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|.||.|++|...+.....  ....||||.++......+.+.+..|+++|+.+++|+||+.++|+|...+.+++|+
T Consensus       302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~  381 (609)
T KOG0200|consen  302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV  381 (609)
T ss_pred             ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence            38999999999999987544332  3688999999988777888999999999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------ccc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~  216 (258)
                      ||+..|+|.+||+..+......... ........++..+++.++.|||.||+||+++++|||||             ||+
T Consensus       382 Ey~~~G~L~~~Lr~~r~~~~~~~~~-~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIa  460 (609)
T KOG0200|consen  382 EYAEHGDLLEFLRKKRVTESIDGSG-VFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIA  460 (609)
T ss_pred             EeccCCcHHHHHHhccccccccccC-CCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEc
Confidence            9999999999999987111111110 00001135999999999999999999999999999999             799


Q ss_pred             CCCcceeeeccCCc----cccc--cccccccccccCCCCcccce
Q psy12228        217 GFDLCILVFFHDST----LLKT--TSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       217 dfgl~~~~~~~~~~----~~gt--~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      |||+|+.....+..    ..++  ..|||||.+.+..|+.+|||
T Consensus       461 DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDV  504 (609)
T KOG0200|consen  461 DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDV  504 (609)
T ss_pred             cccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchh
Confidence            99999964444322    1222  35999999999999999997

>KOG1989|consensus

Probab=99.95  E-value=5.5e-28  Score=218.70  Aligned_cols=163  Identities=17%  Similarity=0.263  Sum_probs=136.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----C---C
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----D---G  143 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~---~  143 (258)
                      +..|.+|+|+.||++...     ..+..+|+|.+-.. ++...+.+.+|+++|+.|..|+|||.+++....    .   -
T Consensus        42 ~~vLAEGGFa~VYla~~~-----~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   42 EKVLAEGGFAQVYLAQDV-----KGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             EEEEccCCcEEEEEEEec-----CCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            448999999999999987     34489999999765 777888999999999999789999999994321    1   2


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--ccccCcc-------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK--VGNDAVR-------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--iiH~DlK-------  214 (258)
                      .++|+||||.+|+|-++|..+..               ..|++.++++|+.|+++|+.+||...  |||||||       
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq---------------~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls  180 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQ---------------TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS  180 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHh---------------ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc
Confidence            58899999999999999997654               23999999999999999999999986  9999996       


Q ss_pred             ------ccCCCcceeeeccC------------Ccccccccccccccc---ccCCCCcccce
Q psy12228        215 ------FIGFDLCILVFFHD------------STLLKTTSTIASLIL---RNQKVSVLLDL  254 (258)
Q Consensus       215 ------i~dfgl~~~~~~~~------------~~~~gt~~y~aPE~~---~~~~~s~~~Dv  254 (258)
                            +||||.+.......            -....|+-|+|||++   .+.++++|+||
T Consensus       181 ~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDI  241 (738)
T KOG1989|consen  181 ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDI  241 (738)
T ss_pred             CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHH
Confidence                  89999886432221            134668999999996   56889999997

>KOG4717|consensus

Probab=99.95  E-value=2.1e-28  Score=210.00  Aligned_cols=168  Identities=23%  Similarity=0.257  Sum_probs=148.0

Q ss_pred             eeeccceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC
Q psy12228         65 VTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG  143 (258)
Q Consensus        65 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~  143 (258)
                      +...+.+..||+|.|..|-++++.     -+|..||||++.+.. ++-....++.|+..|+.+ +|||||++|.+..+..
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHV-----FTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV-QHpNiVRLYEViDTQT   90 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHV-----FTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV-QHPNIVRLYEVIDTQT   90 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhh-----cccceeEEEEecccccchhhhhHHHHHHHHHHHh-cCcCeeeeeehhcccc
Confidence            333466668999999999999987     688999999997654 333446789999999999 9999999999999999


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      .+|||+|+-.+|+|++||.++..                .+.++...+|+.||+.|+.|+|...+||||||         
T Consensus        91 KlyLiLELGD~GDl~DyImKHe~----------------Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEK  154 (864)
T KOG4717|consen   91 KLYLILELGDGGDLFDYIMKHEE----------------GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEK  154 (864)
T ss_pred             eEEEEEEecCCchHHHHHHhhhc----------------cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeee
Confidence            99999999999999999998864                39999999999999999999999999999995         


Q ss_pred             -----ccCCCcceeeeccC--CccccccccccccccccCCCC-cccce
Q psy12228        215 -----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVS-VLLDL  254 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s-~~~Dv  254 (258)
                           +.|||++-.+..+.  .+.+|+..|-|||++.|..|+ +++||
T Consensus       155 lGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDi  202 (864)
T KOG4717|consen  155 LGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDI  202 (864)
T ss_pred             cCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhh
Confidence                 78999998766654  689999999999999999996 77886

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.95  E-value=1.7e-27  Score=205.04  Aligned_cols=183  Identities=36%  Similarity=0.496  Sum_probs=141.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-CcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-GPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-~~~~lv~e~  151 (258)
                      +||+|+||.||+|...+.....+++.||+|+++........+.+.+|+.++..+.+|+||++++++|... ..++++|||
T Consensus        14 ~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey   93 (337)
T cd05054          14 PLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEY   93 (337)
T ss_pred             ccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEec
Confidence            8999999999999876433445668999999986545555677889999999997899999999988754 568899999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCC-----------------------------------C---------CCCCCCCCCCCHH
Q psy12228        152 APHGNLRDFLRKHRPSSGYESP-----------------------------------L---------GSAYTNGNVLTEK  187 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~-----------------------------------~---------~~~~~~~~~l~~~  187 (258)
                      +++|+|.+++............                                   .         .........+++.
T Consensus        94 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  173 (337)
T cd05054          94 CKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLE  173 (337)
T ss_pred             CCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHH
Confidence            9999999999754321000000                                   0         0000012368999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCcceeeeccC-----CccccccccccccccccCCCC
Q psy12228        188 DLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVS  249 (258)
Q Consensus       188 ~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s  249 (258)
                      .+..++.||+.||.|||+++|+|||||             ++|||+++......     ....++..|+|||++.+..++
T Consensus       174 ~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  253 (337)
T cd05054         174 DLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYT  253 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCC
Confidence            999999999999999999999999996             78999998653322     234556789999999999999


Q ss_pred             ccccee
Q psy12228        250 VLLDLI  255 (258)
Q Consensus       250 ~~~Dv~  255 (258)
                      .++||.
T Consensus       254 ~~~Di~  259 (337)
T cd05054         254 TQSDVW  259 (337)
T ss_pred             ccccHH
Confidence            999984

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.95  E-value=1.8e-27  Score=214.29  Aligned_cols=166  Identities=18%  Similarity=0.205  Sum_probs=138.8

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------  143 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------  143 (258)
                      ...||+|+||.||+|...     .++..||||++.... +......+.+|+.++..+ +|+||++++..+...+      
T Consensus        37 ~~~LG~G~fG~Vy~a~~~-----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~~~~~  110 (496)
T PTZ00283         37 SRVLGSGATGTVLCAKRV-----SDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPRNPEN  110 (496)
T ss_pred             EEEEecCCCEEEEEEEEc-----CCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC-CCCcEEEeecceecccccCccc
Confidence            348999999999999987     577899999996532 455567789999999999 9999999988775432      


Q ss_pred             --cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------
Q psy12228        144 --PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------  214 (258)
Q Consensus       144 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------  214 (258)
                        .+++||||+++|+|.++|.....             ....+++..+..++.|++.||.|||+++|+|||||       
T Consensus       111 ~~~i~lV~Ey~~~gsL~~~l~~~~~-------------~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~  177 (496)
T PTZ00283        111 VLMIALVLDYANAGDLRQEIKSRAK-------------TNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC  177 (496)
T ss_pred             ceEEEEEEeCCCCCcHHHHHHHhhc-------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe
Confidence              36899999999999999976432             12348999999999999999999999999999996       


Q ss_pred             ------ccCCCcceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        215 ------FIGFDLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ------i~dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                            |+|||+++.....     .....||+.|+|||++.+..++.++||.
T Consensus       178 ~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVw  229 (496)
T PTZ00283        178 SNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMF  229 (496)
T ss_pred             CCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHH
Confidence                  7899999864332     2456799999999999999999999984

>KOG2052|consensus

Probab=99.95  E-value=2.8e-28  Score=205.69  Aligned_cols=143  Identities=21%  Similarity=0.398  Sum_probs=123.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHH--hcCCCcccceeeeEEcCC----cEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKM--IGQHINIINLLGVCTQDG----PLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~~h~nIv~l~~~~~~~~----~~~  146 (258)
                      .||+|.||+||+|.|+|       ..||||++...    +.+.+.+|.++.+.  + +|+||+.+++.-..++    .+|
T Consensus       218 ~IGkGRyGEVwrG~wrG-------e~VAVKiF~sr----dE~SWfrEtEIYqTvmL-RHENILgFIaaD~~~~gs~TQLw  285 (513)
T KOG2052|consen  218 IIGKGRFGEVWRGRWRG-------EDVAVKIFSSR----DERSWFRETEIYQTVML-RHENILGFIAADNKDNGSWTQLW  285 (513)
T ss_pred             EecCccccceeeccccC-------CceEEEEeccc----chhhhhhHHHHHHHHHh-ccchhhhhhhccccCCCceEEEE
Confidence            79999999999999985       88999999642    33568888888876  6 9999999999865443    589


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC--------CccccCcc----
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR--------KVGNDAVR----  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~--------~iiH~DlK----  214 (258)
                      ||++|.++|||.+||.+..                  ++....++++..+|.||+|||..        .|.|||||    
T Consensus       286 LvTdYHe~GSL~DyL~r~t------------------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNI  347 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLNRNT------------------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNI  347 (513)
T ss_pred             EeeecccCCcHHHHHhhcc------------------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccE
Confidence            9999999999999999843                  89999999999999999999963        69999997    


Q ss_pred             ---------ccCCCcceeeecc-------CCcccccccccccccccc
Q psy12228        215 ---------FIGFDLCILVFFH-------DSTLLKTTSTIASLILRN  245 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~-------~~~~~gt~~y~aPE~~~~  245 (258)
                               |+|+|||......       .+..+||.+|||||++..
T Consensus       348 LVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLde  394 (513)
T KOG2052|consen  348 LVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDE  394 (513)
T ss_pred             EEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhh
Confidence                     8999999865433       368899999999999876

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.95  E-value=2.8e-27  Score=221.06  Aligned_cols=172  Identities=15%  Similarity=0.218  Sum_probs=139.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||+|...     .+++.||+|+++...  .....+++.+|+.+++.+ +||||+++++++.+++..+++|
T Consensus         8 ~~LGkGgfG~VYlA~d~-----~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          8 RLIGKGGMGEVYLAYDP-----VCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             EEEecCCCEEEEEEEEC-----CCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEEEEE
Confidence            38999999999999987     578899999997543  233456799999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++..........      ......+++..++.++.||+.||+|||++||+|||||             ++
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~------e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLi  155 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLS------KELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVIL  155 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccc------hhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEE
Confidence            9999999999997643210000      0012336778899999999999999999999999996             68


Q ss_pred             CCCcceeeecc---------------------CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---------------------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---------------------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....                     .....||+.|+|||++.+..++.++||.
T Consensus       156 DFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIW  215 (932)
T PRK13184        156 DWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIY  215 (932)
T ss_pred             ecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHH
Confidence            99999865111                     0135799999999999999999999974

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.95  E-value=6.2e-27  Score=196.38  Aligned_cols=181  Identities=25%  Similarity=0.325  Sum_probs=140.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|..... ....+..||+|.++..........+.+|+.+++.+ +||||+++++++......+++|||+
T Consensus        12 ~lg~g~~g~vy~~~~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   89 (283)
T cd05090          12 ELGECAFGKIYKGHLYLP-GMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQPVCMLFEYL   89 (283)
T ss_pred             eccccCCcceEEEEEecC-CCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCceEEEEEcC
Confidence            899999999999986311 11356889999998655555567899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++......................+++.++..++.|++.||.|||+++++|||||             ++|||
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg  169 (283)
T cd05090          90 NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLG  169 (283)
T ss_pred             CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEecccc
Confidence            99999999975432100000000011112458899999999999999999999999999995             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......     ....++..|+|||++.+..++.++||.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  210 (283)
T cd05090         170 LSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIW  210 (283)
T ss_pred             ccccccCCcceecccCCCccceecChHHhccCCCCchhhhH
Confidence            997643322     234456789999999988899999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0696|consensus

Probab=99.95  E-value=5.3e-29  Score=208.77  Aligned_cols=173  Identities=23%  Similarity=0.308  Sum_probs=152.3

Q ss_pred             eeeceeeeccceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceee
Q psy12228         60 INVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLG  137 (258)
Q Consensus        60 ~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~  137 (258)
                      .+...++...+-.+||+|+||+|.+++.+     ++...+|||++++..  -+++.+--+.|-++|...++-|.+++++.
T Consensus       343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerk-----gtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHS  417 (683)
T KOG0696|consen  343 RDRIKATDFNFLMVLGKGSFGKVLLAERK-----GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHS  417 (683)
T ss_pred             ccceeecccceEEEeccCccceeeeeccc-----CcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHH
Confidence            44555665677779999999999999998     678999999998764  23445667788889988888899999999


Q ss_pred             eEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---
Q psy12228        138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---  214 (258)
Q Consensus       138 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---  214 (258)
                      +|.+.+.+++||||+.||+|.-.++..+.                 +.++.+..+|..|+.||-|||++|||.||||   
T Consensus       418 cFQTmDRLyFVMEyvnGGDLMyhiQQ~Gk-----------------FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDN  480 (683)
T KOG0696|consen  418 CFQTMDRLYFVMEYVNGGDLMYHIQQVGK-----------------FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDN  480 (683)
T ss_pred             HhhhhhheeeEEEEecCchhhhHHHHhcc-----------------cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccc
Confidence            99999999999999999999999998887                 9999999999999999999999999999995   


Q ss_pred             ----------ccCCCcceeeecc---CCccccccccccccccccCCCCcccce
Q psy12228        215 ----------FIGFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 ----------i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                                |+|||+++.....   ..+++|||.|+|||++..++|+.++||
T Consensus       481 vmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDW  533 (683)
T KOG0696|consen  481 VMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDW  533 (683)
T ss_pred             eEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhH
Confidence                      8999999875444   368999999999999999999999997

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.95  E-value=3.1e-27  Score=203.82  Aligned_cols=184  Identities=37%  Similarity=0.513  Sum_probs=139.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-CcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-GPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-~~~~lv~e  150 (258)
                      ..||+|+||.||+|...+.....+++.||||.++..........+.+|+.++..+++||||+++++++... ...+++||
T Consensus        13 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~e   92 (343)
T cd05103          13 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE   92 (343)
T ss_pred             ccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEe
Confidence            38999999999999876433345678999999986545555677999999999997789999999988654 46899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCC-CC-----------------------------------------C--------CCCCCC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYE-SP-----------------------------------------L--------GSAYTN  180 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~-~~-----------------------------------------~--------~~~~~~  180 (258)
                      |+++|+|.+++.......... ..                                         .        ......
T Consensus        93 y~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (343)
T cd05103          93 FCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLY  172 (343)
T ss_pred             ccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhh
Confidence            999999999997643100000 00                                         0        000001


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCcceeeeccC-----Cccccccccccccc
Q psy12228        181 GNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILVFFHD-----STLLKTTSTIASLI  242 (258)
Q Consensus       181 ~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~  242 (258)
                      ...+++.++..++.||+.||.|||+++|+|||||             ++|||++.......     ....++..|+|||+
T Consensus       173 ~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  252 (343)
T cd05103         173 KKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  252 (343)
T ss_pred             hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHH
Confidence            2357899999999999999999999999999996             78999987543221     22344567999999


Q ss_pred             cccCCCCccccee
Q psy12228        243 LRNQKVSVLLDLI  255 (258)
Q Consensus       243 ~~~~~~s~~~Dv~  255 (258)
                      +.+..++.++||.
T Consensus       253 ~~~~~~~~~~Di~  265 (343)
T cd05103         253 IFDRVYTIQSDVW  265 (343)
T ss_pred             hcCCCCCchhhHH
Confidence            9998999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=2.5e-27  Score=198.21  Aligned_cols=164  Identities=18%  Similarity=0.196  Sum_probs=129.4

Q ss_pred             eeeecCceEEEEEEEcccc-------------------cCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCccc
Q psy12228         73 VKIKCAFGKVICAEANGIL-------------------KQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINII  133 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~-------------------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv  133 (258)
                      .||+|+||.||+|.+....                   .......||+|++... .......+.+|+.+++.+ +||||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv   79 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS-HRDIALAFFETASLMSQV-SHIHLA   79 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH-HHHHHHHHHHHHHHHhcC-CCCCee
Confidence            6899999999999863111                   1122357999999754 233446788999999999 999999


Q ss_pred             ceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc
Q psy12228        134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV  213 (258)
Q Consensus       134 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl  213 (258)
                      ++++++......++||||+++|+|..++.....                .+++..+..++.||+.||+|||+++|+||||
T Consensus        80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dl  143 (274)
T cd05076          80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG----------------RVPVAWKITVAQQLASALSYLEDKNLVHGNV  143 (274)
T ss_pred             eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHcCCccCCCC
Confidence            999999999999999999999999999876432                3899999999999999999999999999999


Q ss_pred             cc--------------------cCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        214 RF--------------------IGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       214 Ki--------------------~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      |.                    +|||++.... ......++..|+|||++.+ ..++.++||.
T Consensus       144 kp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~  205 (274)
T cd05076         144 CAKNILLARLGLAEGTSPFIKLSDPGVSFTAL-SREERVERIPWIAPECVPGGNSLSTAADKW  205 (274)
T ss_pred             CcccEEEeccCcccCccceeeecCCccccccc-cccccccCCcccCchhhcCCCCCCcHHHHH
Confidence            73                    4555554321 1233467788999999876 5679999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.95  E-value=1.2e-26  Score=195.47  Aligned_cols=183  Identities=46%  Similarity=0.657  Sum_probs=144.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...+.........+|+|.++..........+.+|+.++..+.+|+||+++++++..++..+++|||+
T Consensus        19 ~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~   98 (293)
T cd05053          19 PLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYA   98 (293)
T ss_pred             EecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeC
Confidence            89999999999999864322234578999999865555666779999999999967999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|..++........... ..........+++..++.++.|++.||.|||+++|+|||||             ++|||
T Consensus        99 ~~~~L~~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg  177 (293)
T cd05053          99 AHGNLRDFLRARRPPGEYAS-PDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFG  177 (293)
T ss_pred             CCCcHHHHHHhcCCCccccc-cccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccc
Confidence            99999999987542111111 11111234568999999999999999999999999999995             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccCCCCcccceeE
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      +++......     ....++..|+|||++.+..++.++||..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  219 (293)
T cd05053         178 LARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWS  219 (293)
T ss_pred             cccccccccceeccCCCCCCccccCHHHhccCCcCcccceee
Confidence            988654322     1223456799999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.95  E-value=8e-27  Score=192.63  Aligned_cols=163  Identities=18%  Similarity=0.283  Sum_probs=141.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++...     .++..+|+|.++........+.+.+|+.+++.+ +|+||+++++.+.+++.++++|||
T Consensus         6 ~~lg~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   79 (255)
T cd08219           6 RVVGEGSFGRALLVQHV-----NSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVMEY   79 (255)
T ss_pred             EEeeccCCeEEEEEEEc-----CCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEee
Confidence            38999999999999987     577899999997544555667889999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....               ..+++..+..++.|++.||.|||+++|+|+|||             ++||
T Consensus        80 ~~~~~l~~~~~~~~~---------------~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~df  144 (255)
T cd08219          80 CDGGDLMQKIKLQRG---------------KLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDF  144 (255)
T ss_pred             CCCCcHHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEccc
Confidence            999999999876432               347899999999999999999999999999996             6799


Q ss_pred             CcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......   ....+++.|+|||++.+..++.++||.
T Consensus       145 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  184 (255)
T cd08219         145 GSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIW  184 (255)
T ss_pred             CcceeecccccccccccCCccccCHHHHccCCcCchhhhh
Confidence            9987654322   346788999999999998899999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.95  E-value=5.5e-27  Score=197.25  Aligned_cols=164  Identities=20%  Similarity=0.307  Sum_probs=131.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhc--CCCcccceeeeEEc-----CC
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIG--QHINIINLLGVCTQ-----DG  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--~h~nIv~l~~~~~~-----~~  143 (258)
                      ..||+|+||.||+|....    ..+..||+|.++.... ......+.+|+.+++.+.  +||||++++++|..     ..
T Consensus         7 ~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~   82 (290)
T cd07862           7 AEIGEGAYGKVFKARDLK----NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   82 (290)
T ss_pred             eEeccCCCeEEEEEEEcC----CCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCC
Confidence            379999999999998752    2457899999975432 222345667777777653  69999999999852     34


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      .+++||||++ ++|.+++.....               ..+++..+..++.|++.||.|||+++|+|||||         
T Consensus        83 ~~~lv~e~~~-~~l~~~~~~~~~---------------~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~  146 (290)
T cd07862          83 KLTLVFEHVD-QDLTTYLDKVPE---------------PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS  146 (290)
T ss_pred             cEEEEEccCC-CCHHHHHHhCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC
Confidence            6899999997 599999976542               338999999999999999999999999999996         


Q ss_pred             ----ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||+++......  ....||+.|+|||++.+..++.++||.
T Consensus       147 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  193 (290)
T cd07862         147 GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLW  193 (290)
T ss_pred             CCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchH
Confidence                78999998654332  456789999999999998999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=5.1e-27  Score=197.71  Aligned_cols=161  Identities=24%  Similarity=0.319  Sum_probs=141.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .+++.||+|++....  .....+.+.+|+++++++ +||||+++++++...+..++||
T Consensus         7 ~~ig~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           7 KTLGTGSFGRVMLVRHK-----GSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             EEeecCCCeEEEEEEEc-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEEEE
Confidence            38999999999999987     567899999996432  223456789999999999 8999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++.....                 +++..+..++.|++.||.|||++|++|+|||             ++
T Consensus        81 e~~~~~~L~~~~~~~~~-----------------l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~  143 (290)
T cd05580          81 EYVPGGELFSHLRKSGR-----------------FPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKIT  143 (290)
T ss_pred             ecCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEe
Confidence            99999999999987655                 8999999999999999999999999999994             78


Q ss_pred             CCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++...........+++.|+|||.+.+..++.++||.
T Consensus       144 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  182 (290)
T cd05580         144 DFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWW  182 (290)
T ss_pred             eCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHH
Confidence            999998765555667889999999999888889999985

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.95  E-value=6.2e-27  Score=196.12  Aligned_cols=156  Identities=20%  Similarity=0.206  Sum_probs=136.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||+|...     .++..||+|++...........+.+|+.+++++ +||||+++++++...+..++||||+
T Consensus         8 ~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           8 ILGHGNGGTVYKAYHL-----LTRRILAVKVIPLDITVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             eeccCCCeEEEEEEEc-----CCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEEEecC
Confidence            7999999999999986     577899999997654455567799999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|..+.    .                 +++..+..++.|++.||.|||+++|+|+|||             ++|||
T Consensus        82 ~~~~l~~~~----~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg  140 (279)
T cd06619          82 DGGSLDVYR----K-----------------IPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFG  140 (279)
T ss_pred             CCCChHHhh----c-----------------CCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCC
Confidence            999996542    2                 7889999999999999999999999999995             78999


Q ss_pred             cceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++...... .....++..|+|||++.+..++.++||.
T Consensus       141 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  177 (279)
T cd06619         141 VSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVW  177 (279)
T ss_pred             cceecccccccCCCCChhhcCceeecCCCCCCcchHH
Confidence            99764433 2456889999999999998999999984

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.95  E-value=7e-27  Score=195.96  Aligned_cols=181  Identities=27%  Similarity=0.324  Sum_probs=141.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...+......+..||+|+++........+.+.+|+.+++.+ +||||+++++++.+.+..++++||+
T Consensus        12 ~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~~~~e~~   90 (283)
T cd05091          12 ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQPLSMIFSYC   90 (283)
T ss_pred             HhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCceEEEEEcC
Confidence            789999999999998643333456889999998654555567789999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++........... ..........+++..+..++.|++.||.|||+++|+|||||             ++|||
T Consensus        91 ~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg  169 (283)
T cd05091          91 SHSDLHEFLVMRSPHSDVGS-TDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLG  169 (283)
T ss_pred             CCCcHHHHHHhcCCCccccc-cccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccc
Confidence            99999999975432111000 01111123458899999999999999999999999999995             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......     ....+++.|+|||++.+..++.++||.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  210 (283)
T cd05091         170 LFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIW  210 (283)
T ss_pred             cccccccchheeeccCccCCccccCHHHHhcCCCCcchhHH
Confidence            987543222     234456789999999888899999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.95  E-value=4.4e-27  Score=196.71  Aligned_cols=180  Identities=29%  Similarity=0.404  Sum_probs=143.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.........+...||+|.++........+.+.+|+++++.+ +|+||+++++++......+++|||
T Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~   89 (280)
T cd05049          11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF-QHENIVKFYGVCTEGDPPIMVFEY   89 (280)
T ss_pred             hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc-CCCCchheeeEEecCCCeEEEEec
Confidence            3799999999999987633223456889999998765554567899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++...+.....   ..........+++..+..++.|++.|+.|||+++++|||||             ++||
T Consensus        90 ~~~~~L~~~i~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~  166 (280)
T cd05049          90 MEHGDLNKFLRSHGPDAAF---LKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDF  166 (280)
T ss_pred             CCCCCHHHHHHhcCCchhh---hcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCc
Confidence            9999999999875421000   00011123458999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......     ....+++.|+|||++.+..+++++||.
T Consensus       167 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  208 (280)
T cd05049         167 GMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW  208 (280)
T ss_pred             ccceecccCcceecCCCCcccceecChhhhccCCcchhhhHH
Confidence            9987543221     233456789999999999999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.95  E-value=7.2e-27  Score=197.03  Aligned_cols=177  Identities=28%  Similarity=0.380  Sum_probs=142.1

Q ss_pred             eeeeecCceEEEEEEEcccc-----------cCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEE
Q psy12228         72 YVKIKCAFGKVICAEANGIL-----------KQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCT  140 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~-----------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~  140 (258)
                      ..||+|+||.||++......           ....+..||+|.+.........+.+.+|+.+++.+ +||||+++++++.
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~   89 (296)
T cd05051          11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-SDPNIARLLGVCT   89 (296)
T ss_pred             ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-CCCCEeEEEEEEe
Confidence            38999999999999875311           11234679999998765666678899999999999 9999999999999


Q ss_pred             cCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------
Q psy12228        141 QDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------  214 (258)
Q Consensus       141 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------  214 (258)
                      .++..+++|||+++++|.+++.........      .......+++..++.++.|++.||.|||+++++|||||      
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili  163 (296)
T cd05051          90 VDPPLCMIMEYMENGDLNQFLQKHVAETSG------LACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV  163 (296)
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhccccccc------ccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence            989999999999999999999875521000      01112358999999999999999999999999999996      


Q ss_pred             -------ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 -------FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -------i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                             ++|||+++......     ....+++.|+|||++.+..++.++||.
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  216 (296)
T cd05051         164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVW  216 (296)
T ss_pred             cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhh
Confidence                   68999987543332     234456789999999988899999974

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.95  E-value=1.1e-26  Score=193.13  Aligned_cols=166  Identities=27%  Similarity=0.321  Sum_probs=139.5

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.+...  ..+...||+|.++..........|.+|+.+++.+ +||||+++++++...+..+++||
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~--~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~e   85 (266)
T cd05033           9 EKVIGGGEFGEVCRGRLKLP--GKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPVMIITE   85 (266)
T ss_pred             eeEecCCccceEEEEEEccC--CCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCceEEEEE
Confidence            34899999999999998621  1234689999998765666667899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..+..++.|++.||.|||+++|+|+|||             ++|
T Consensus        86 ~~~~~~L~~~~~~~~~----------------~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~d  149 (266)
T cd05033          86 YMENGSLDKFLRENDG----------------KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSD  149 (266)
T ss_pred             cCCCCCHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECc
Confidence            9999999999976542                38999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....++..|+|||.+.+..++.++||.
T Consensus       150 fg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~  192 (266)
T cd05033         150 FGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVW  192 (266)
T ss_pred             cchhhcccccccceeccCCCCCccccChhhhccCCCccccchH
Confidence            99988654222     122345689999999998999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.95  E-value=4e-27  Score=200.14  Aligned_cols=161  Identities=19%  Similarity=0.292  Sum_probs=135.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|.++..........+.+|+.+++.+ +||||+++++++..++..++||||
T Consensus        12 ~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872          12 EKLGEGTYATVFKGRSK-----LTENLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             EEecccCCEEEEEEEec-----CCCCeEEEEEeeccccCCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEEEEeC
Confidence            37999999999999987     567889999997544333445678999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++ +|.+++.....                .+++..+..++.|++.||.|||++||+|||||             ++||
T Consensus        86 ~~~-~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Df  148 (309)
T cd07872          86 LDK-DLKQYMDDCGN----------------IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADF  148 (309)
T ss_pred             CCC-CHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcc
Confidence            986 99998876542                37899999999999999999999999999995             7899


Q ss_pred             CcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      |+++......   ....+|+.|+|||++.+ ..++.++||.
T Consensus       149 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw  189 (309)
T cd07872         149 GLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMW  189 (309)
T ss_pred             ccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHH
Confidence            9987643322   34567899999999865 5678999974

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.95  E-value=7.1e-27  Score=193.54  Aligned_cols=162  Identities=23%  Similarity=0.288  Sum_probs=133.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.+..   ...+..||+|++.........+.+.+|+.+++++ +||||+++++++. ....++||||+
T Consensus         2 ~ig~G~~g~v~~~~~~~---~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~-~~~~~lv~e~~   76 (257)
T cd05115           2 ELGSGNFGCVKKGVYKM---RKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL-DNPYIVRMIGVCE-AEALMLVMEMA   76 (257)
T ss_pred             ccCCCCcccEEEEEEec---CCCceeEEEEEcccccChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEc-CCCeEEEEEeC
Confidence            48999999999998752   1345679999998665555567799999999999 9999999999885 45789999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..++.++.|++.||.|||+++++|||||             ++|||
T Consensus        77 ~~~~L~~~l~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg  140 (257)
T cd05115          77 SGGPLNKFLSGKKD----------------EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFG  140 (257)
T ss_pred             CCCCHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCC
Confidence            99999999975432                38999999999999999999999999999996             78999


Q ss_pred             cceeeeccCC------ccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHDS------TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~~------~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++........      ...++..|+|||++.+..++.++||.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  182 (257)
T cd05115         141 LSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVW  182 (257)
T ss_pred             ccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHH
Confidence            9875433221      11224689999999988899999974

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.95  E-value=1.5e-26  Score=196.17  Aligned_cols=183  Identities=45%  Similarity=0.586  Sum_probs=142.4

Q ss_pred             eeeeecCceEEEEEEEcccc--cCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGIL--KQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...+..  ....+..||+|.++..........+.+|+.+++.+.+||||+++++++......+++|
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~  100 (304)
T cd05101          21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV  100 (304)
T ss_pred             ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEE
Confidence            38999999999999864211  1234568999999765455566789999999999977999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++........ .....-.......+++..+..++.||+.||.|||++|++|||||             ++
T Consensus       101 e~~~~~~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~  179 (304)
T cd05101         101 EYASKGNLREYLRARRPPGM-EYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIA  179 (304)
T ss_pred             ecCCCCcHHHHHHhcCCccc-ccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEEC
Confidence            99999999999987543110 00000011123458999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++......     ....+++.|+|||++.+..++.++||.
T Consensus       180 D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  223 (304)
T cd05101         180 DFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW  223 (304)
T ss_pred             CCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHH
Confidence            999988653322     223455789999999998999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.95  E-value=6.7e-27  Score=193.29  Aligned_cols=158  Identities=26%  Similarity=0.384  Sum_probs=132.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++.+.      .+..+|+|.++...  .....+.+|+.+++.+ +||||+++++++...+..+++|||+
T Consensus        11 ~lg~G~~~~vy~~~~~------~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~e~~   81 (256)
T cd05114          11 ELGSGQFGVVHLGKWR------AQIKVAIKAINEGA--MSEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIVTEFM   81 (256)
T ss_pred             EecCCcCceEEEEEec------cCceEEEEecccCC--ccHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEEEEcC
Confidence            7999999999999875      34679999987532  2235688999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..+..++.|++.||.|||+++++|||||             ++|||
T Consensus        82 ~~~~L~~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g  145 (256)
T cd05114          82 ENGCLLNYLRQRQG----------------KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFG  145 (256)
T ss_pred             CCCcHHHHHHhCcc----------------CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCC
Confidence            99999999876432                28999999999999999999999999999995             78999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......    ....++..|+|||++.+..++.++||.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  185 (256)
T cd05114         146 MTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVW  185 (256)
T ss_pred             CccccCCCceeccCCCCCchhhCChhhcccCccchhhhhH
Confidence            887543222    223345689999999988999999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.95  E-value=1.6e-26  Score=196.33  Aligned_cols=182  Identities=45%  Similarity=0.623  Sum_probs=141.7

Q ss_pred             eeeecCceEEEEEEEccccc--CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILK--QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||++...+...  ......+|+|.++..........+.+|+.+++.+.+||||+++++++...+..++|||
T Consensus        25 ~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e  104 (307)
T cd05098          25 PLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE  104 (307)
T ss_pred             eeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEe
Confidence            89999999999998753211  1234679999998654555567789999999999779999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++...... +.....+........+++.+++.++.|++.||+|||++|++|||||             ++|
T Consensus       105 ~~~~~~L~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~d  183 (307)
T cd05098         105 YASKGNLREYLRARRPP-GMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD  183 (307)
T ss_pred             cCCCCcHHHHHHhcCCc-ccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECC
Confidence            99999999999875431 1111112222233458999999999999999999999999999996             689


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....+++.|+|||++.+..++.++||.
T Consensus       184 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  226 (307)
T cd05098         184 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW  226 (307)
T ss_pred             CcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHH
Confidence            99887543221     122334689999999998899999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=8.5e-27  Score=202.23  Aligned_cols=158  Identities=22%  Similarity=0.239  Sum_probs=132.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------c
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------P  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------~  144 (258)
                      ..||+|+||.||++...     .++..||+|++.... .......+.+|+.+++.+ +||||+++++++....      .
T Consensus        27 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~  100 (359)
T cd07876          27 KPIGSGAQGIVCAAFDT-----VLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLEEFQD  100 (359)
T ss_pred             EEeecCCCEEEEEEEEc-----CCCceeEEEEecccccchhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCccccce
Confidence            38999999999999987     578999999996532 334456788999999999 9999999999986543      4


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +++||||+++ +|.+.+..  .                 +++..+..++.|++.||.|||++||+|||||          
T Consensus       101 ~~lv~e~~~~-~l~~~~~~--~-----------------~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~  160 (359)
T cd07876         101 VYLVMELMDA-NLCQVIHM--E-----------------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  160 (359)
T ss_pred             eEEEEeCCCc-CHHHHHhc--c-----------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence            7999999976 77776643  2                 7889999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++.....  .....+|+.|+|||++.+..++.++||.
T Consensus       161 ~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw  206 (359)
T cd07876         161 TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIW  206 (359)
T ss_pred             CEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhH
Confidence               7899999754322  2456789999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.95  E-value=5e-27  Score=208.76  Aligned_cols=160  Identities=19%  Similarity=0.249  Sum_probs=128.8

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--------
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--------  142 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--------  142 (258)
                      ..+||+|+||.||+|...     .++..||||++....     ....+|+.+|+.+ +||||+++++++...        
T Consensus        71 ~~~LG~G~fg~Vy~~~~~-----~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         71 GNIIGNGSFGVVYEAICI-----DTSEKVAIKKVLQDP-----QYKNRELLIMKNL-NHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             eEEEEeCCCEEEEEEEEC-----CCCCEEEEEEEecCc-----chHHHHHHHHHhc-CCCCCcceeeeEeecccccCCCc
Confidence            447999999999999987     577899999986431     1234799999999 999999999887532        


Q ss_pred             CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------
Q psy12228        143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------  214 (258)
Q Consensus       143 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------  214 (258)
                      ..+++||||+++ +|.+++.....             ....+++..++.++.||+.||.|||+++|+|||||        
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~-------------~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~  205 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYAR-------------NNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP  205 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhh-------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC
Confidence            146799999985 88887765321             12348999999999999999999999999999995        


Q ss_pred             ------ccCCCcceeeeccC--Ccccccccccccccccc-CCCCccccee
Q psy12228        215 ------FIGFDLCILVFFHD--STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ------i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                            |+|||+++......  ....||+.|+|||++.+ ..|+.++||.
T Consensus       206 ~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  255 (440)
T PTZ00036        206 NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLW  255 (440)
T ss_pred             CCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHH
Confidence                  78999998654332  35678999999999876 4689999974

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.95  E-value=7.8e-27  Score=197.92  Aligned_cols=181  Identities=31%  Similarity=0.422  Sum_probs=139.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.+..   .+....+|+|.++..........+.+|++++.++.+|+||+++++++.+++.++++|||
T Consensus        13 ~~lg~G~~g~V~~a~~~~---~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~   89 (303)
T cd05088          13 DVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY   89 (303)
T ss_pred             eeecCCCCceEEEEEEcc---CCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEe
Confidence            389999999999999862   12234678888876545556678999999999997899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++...... ...............+++.+++.++.|++.||+|||++|++|||||             ++||
T Consensus        90 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~df  168 (303)
T cd05088          90 APHGNLLDFLRKSRVL-ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF  168 (303)
T ss_pred             CCCCcHHHHHHhcccc-cccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCcc
Confidence            9999999999875421 0000000011122358999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC--CccccccccccccccccCCCCcccceeE
Q psy12228        219 DLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       219 gl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |++.......  .....+..|+|||++.+..++.++||..
T Consensus       169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  208 (303)
T cd05088         169 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS  208 (303)
T ss_pred             ccCcccchhhhcccCCCcccccCHHHHhccCCcccccchh
Confidence            9986432211  2223356799999999888999999853

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.95  E-value=1e-26  Score=193.35  Aligned_cols=160  Identities=20%  Similarity=0.294  Sum_probs=137.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|+++.. .......+.+|+.+++.+ +||||+++++.+...+..+++|||
T Consensus        15 ~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~-~~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645          15 QRIGSGTYGDVYKARNV-----NTGELAAIKVIKLE-PGEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHhCCCCCeEEEEEEEc-----CCCcEEEEEEEecC-chhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEec
Confidence            37899999999999987     57789999999764 333445688999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++...+.                 +++.++..++.|++.||.|||++|++|+|||             ++||
T Consensus        88 ~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~df  150 (267)
T cd06645          88 CGGGSLQDIYHVTGP-----------------LSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADF  150 (267)
T ss_pred             cCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcc
Confidence            999999999987654                 8999999999999999999999999999995             7899


Q ss_pred             Ccceeeecc---CCccccccccccccccc---cCCCCccccee
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                      |++......   .....|+..|+|||++.   ...++.++||.
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dvw  193 (267)
T cd06645         151 GVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIW  193 (267)
T ss_pred             eeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhH
Confidence            998754322   23557899999999984   45688899974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0599|consensus

Probab=99.95  E-value=3.5e-28  Score=194.16  Aligned_cols=163  Identities=18%  Similarity=0.233  Sum_probs=141.0

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-------hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-------DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD  142 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~  142 (258)
                      ....||+|..+.|-++..+     .++..+|+|++....+       ..-++.-..|+.+|+++..||+|+++.+.++++
T Consensus        21 pkeilgrgvss~vrRci~k-----~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   21 PKEILGRGVSSVVRRCIHK-----ETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             hHHHhcccchhhhhhhhhc-----ccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            3447999999999999887     6889999999954321       123466788999999999999999999999999


Q ss_pred             CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------
Q psy12228        143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------  214 (258)
Q Consensus       143 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------  214 (258)
                      ..+++|+|.|+.|.|.+||...-.                 +++...+.||+|+..|+.|||.++|||||||        
T Consensus        96 sF~FlVFdl~prGELFDyLts~Vt-----------------lSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILldd  158 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELFDYLTSKVT-----------------LSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDD  158 (411)
T ss_pred             chhhhhhhhcccchHHHHhhhhee-----------------ecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecc
Confidence            999999999999999999987655                 9999999999999999999999999999996        


Q ss_pred             -----ccCCCcceeeeccC--Ccccccccccccccccc------CCCCcccce
Q psy12228        215 -----FIGFDLCILVFFHD--STLLKTTSTIASLILRN------QKVSVLLDL  254 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~------~~~s~~~Dv  254 (258)
                           |+|||++.....+.  ...+|||+|+|||.+.=      ..|+..+|+
T Consensus       159 n~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~  211 (411)
T KOG0599|consen  159 NMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDE  211 (411)
T ss_pred             ccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhH
Confidence                 78999999877665  57899999999999853      466777764

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.95  E-value=1.4e-26  Score=192.44  Aligned_cols=160  Identities=20%  Similarity=0.272  Sum_probs=136.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|+++.. .......+.+|+.+++.+ +||||+++++++..++..++||||
T Consensus        15 ~~lg~g~~g~vy~~~~~-----~~~~~~aik~~~~~-~~~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646          15 QRVGSGTYGDVYKARNL-----HTGELAAVKIIKLE-PGDDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             heeecCCCeEEEEEEEC-----CCCeEEEEEEEecC-ccchHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEEeC
Confidence            48999999999999987     57789999999754 223345688999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                 +++..+..++.|++.||.|||+++|+|||||             ++||
T Consensus        88 ~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~df  150 (267)
T cd06646          88 CGGGSLQDIYHVTGP-----------------LSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADF  150 (267)
T ss_pred             CCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcC
Confidence            999999999976544                 8999999999999999999999999999985             7899


Q ss_pred             CcceeeeccC---Cccccccccccccccc---cCCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                      |++.......   ....+++.|+|||.+.   ...++.++||.
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvw  193 (267)
T cd06646         151 GVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIW  193 (267)
T ss_pred             ccceeecccccccCccccCccccCHhHcccccCCCCcchhhHH
Confidence            9988654322   3457889999999984   34578888874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.95  E-value=6.6e-27  Score=203.91  Aligned_cols=160  Identities=20%  Similarity=0.274  Sum_probs=134.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-----cE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-----PL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-----~~  145 (258)
                      ..||+|+||.||++...     .++..||+|.+.... ......++.+|+.+++.+ +|+||+++++++...+     ..
T Consensus         6 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~   79 (372)
T cd07853           6 RPIGYGAFGVVWSVTDP-----RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEEI   79 (372)
T ss_pred             ceeeeCCCEEEEEEEEC-----CCCCEEEEEeccccccchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccceE
Confidence            48999999999999986     577899999996532 233456788999999999 9999999999998776     78


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++|+||+.+ +|.+++.....                 +++..+..++.||+.||.|||+++|+|||||           
T Consensus        80 ~lv~e~~~~-~l~~~~~~~~~-----------------l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~  141 (372)
T cd07853          80 YVVTELMQS-DLHKIIVSPQP-----------------LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV  141 (372)
T ss_pred             EEEeecccc-CHHHHHhcCCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCC
Confidence            999999974 89888876544                 8999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeeccC----CccccccccccccccccC-CCCccccee
Q psy12228        215 --FIGFDLCILVFFHD----STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                        ++|||+++......    ....+|+.|+|||++.+. .++.++||.
T Consensus       142 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw  189 (372)
T cd07853         142 LKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIW  189 (372)
T ss_pred             EEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHH
Confidence              78999998643322    234678999999999874 479999974

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.95  E-value=1.2e-26  Score=192.67  Aligned_cols=165  Identities=18%  Similarity=0.246  Sum_probs=139.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCC--CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||||.++..  ........+.+|+.+++.+ +||||+++++++.+.+..++++
T Consensus         8 ~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           8 KKIGRGQFSEVYRATCL-----LDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             eeeccCCCeeEEEEEEe-----CCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEEE
Confidence            37999999999999987     57789999988642  2344556789999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....             ....+++..+..++.|++.||.|||+++++|+|||             ++
T Consensus        82 e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~  148 (267)
T cd08228          82 ELADAGDLSQMIKYFKK-------------QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLG  148 (267)
T ss_pred             EecCCCcHHHHHHHhhh-------------ccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEEC
Confidence            99999999999875332             11348899999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......   ....+++.|+|||.+.+..++.++||.
T Consensus       149 d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~  190 (267)
T cd08228         149 DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIW  190 (267)
T ss_pred             ccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHH
Confidence            999888654332   245788899999999988899999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.95  E-value=9.2e-27  Score=193.31  Aligned_cols=162  Identities=30%  Similarity=0.388  Sum_probs=137.5

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|...     .++..||+|.++..  ......+.+|+.+++.+ +|+||+++++++..++..+++||
T Consensus        11 ~~~ig~g~~~~v~~~~~~-----~~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   82 (263)
T cd05052          11 KHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKED--TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITE   82 (263)
T ss_pred             eeecCCcccceEEEEEEe-----cCCceEEEEEecCC--chHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcEEEEE
Confidence            348999999999999987     56789999998753  33456789999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....               ..+++..++.++.|++.||.|||+++++|||||             ++|
T Consensus        83 ~~~~~~L~~~~~~~~~---------------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~d  147 (263)
T cd05052          83 FMTYGNLLDYLRECNR---------------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD  147 (263)
T ss_pred             eCCCCcHHHHHHhCCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCC
Confidence            9999999999976442               338999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......    .....+..|+|||.+.+..++.++||.
T Consensus       148 f~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  189 (263)
T cd05052         148 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW  189 (263)
T ss_pred             CccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHH
Confidence            99987654332    122335679999999999999999984

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.95  E-value=1.1e-26  Score=193.36  Aligned_cols=167  Identities=25%  Similarity=0.317  Sum_probs=134.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...+   ..++..+|+|.++..........+.+|+.+++.+ +||||+++++++.+....++||||+
T Consensus         2 ~lg~G~~g~Vy~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~   77 (269)
T cd05087           2 EIGNGWFGKVILGEVNS---GYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFC   77 (269)
T ss_pred             cccccCCceEEEEEEcC---CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECC
Confidence            58999999999998752   2355789999998655555556799999999999 9999999999999888999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++......            .....++..+..++.|++.||.|||+++++|||||             ++|||
T Consensus        78 ~~g~L~~~l~~~~~~------------~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg  145 (269)
T cd05087          78 PLGDLKGYLRSCRKA------------ELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYG  145 (269)
T ss_pred             CCCcHHHHHHHhhhc------------ccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCcc
Confidence            999999999864420            11236778888999999999999999999999995             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccC-------CCCccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQ-------KVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~-------~~s~~~Dv~  255 (258)
                      ++.......     ....++..|+|||++.+.       .++.++||.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diw  193 (269)
T cd05087         146 LSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVW  193 (269)
T ss_pred             ccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhH
Confidence            986432221     234567889999998642       357888874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.95  E-value=9.5e-27  Score=193.78  Aligned_cols=167  Identities=20%  Similarity=0.314  Sum_probs=132.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.....   .....+|+|.+...........+.+|+.+++.+ +|+||+++++.+.+....++||||+
T Consensus         2 ~lg~G~fg~v~~~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~   77 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRG---MSKARVVVKELRASATPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFC   77 (269)
T ss_pred             cCCccCCceEEEEEEecC---CCCeEEEEeecCccCChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeC
Confidence            589999999999976421   234679999887654555567789999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++......            .....++..+..++.||+.||+|||+++|+|||||             ++|||
T Consensus        78 ~~g~L~~~l~~~~~~------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg  145 (269)
T cd05042          78 PLGDLKNYLRSNRGM------------VAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYG  145 (269)
T ss_pred             CCCcHHHHHHhcccc------------ccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccc
Confidence            999999999875431            01225678889999999999999999999999996             78999


Q ss_pred             cceeeecc-----CCcccccccccccccccc-------CCCCccccee
Q psy12228        220 LCILVFFH-----DSTLLKTTSTIASLILRN-------QKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~s~~~Dv~  255 (258)
                      ++......     .....+++.|+|||++..       ..++.++||.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diw  193 (269)
T cd05042         146 LALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIW  193 (269)
T ss_pred             cccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHH
Confidence            98643221     123345678999999743       4567888874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=5.9e-27  Score=203.15  Aligned_cols=156  Identities=17%  Similarity=0.210  Sum_probs=132.8

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ....||+|+||.||+|...     .++..||+|+....       ....|+.+++++ +||||+++++++...+..++||
T Consensus        70 ~~~~lg~G~~g~Vy~~~~~-----~~~~~valK~~~~~-------~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         70 VIKTLTPGSEGRVFVATKP-----GQPDPVVLKIGQKG-------TTLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             EEEEecCCCCeEEEEEEEC-----CCCceEEEEeCCcc-------ccHHHHHHHHhC-CCCCCcChhheEEeCCeeEEEE
Confidence            3447999999999999987     56788999986532       234689999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      |++. |+|.+++.....                .+++..+..|+.||+.||.|||+++|+|||||             ++
T Consensus       137 e~~~-~~l~~~l~~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~  199 (357)
T PHA03209        137 PHYS-SDLYTYLTKRSR----------------PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIG  199 (357)
T ss_pred             EccC-CcHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEe
Confidence            9996 599999876432                38999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....  .....||+.|+|||++.+..++.++||.
T Consensus       200 DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  240 (357)
T PHA03209        200 DLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIW  240 (357)
T ss_pred             cCccccccccCcccccccccccccCCeecCCCCCCchhhHH
Confidence            99998753322  2356799999999999999999999974

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=1.9e-26  Score=190.23  Aligned_cols=163  Identities=18%  Similarity=0.249  Sum_probs=141.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCC-CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|++|.||++...     .++..|++|.+... ........+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus         6 ~~l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08529           6 NKIGKGSFGVVFKVVRK-----ADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVME   79 (256)
T ss_pred             EEecCCCCeEEEEEEEc-----CCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEEE
Confidence            47999999999999987     57789999998643 2445667899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....               ..+++..+..++.|++.||.|||+++++|+|||             ++|
T Consensus        80 ~~~~~~L~~~l~~~~~---------------~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~d  144 (256)
T cd08529          80 YAENGDLHKLLKMQRG---------------RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGD  144 (256)
T ss_pred             eCCCCcHHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcc
Confidence            9999999999987532               348999999999999999999999999999996             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......   ....+++.|+|||++.+..++.++||.
T Consensus       145 f~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  185 (256)
T cd08529         145 LGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVW  185 (256)
T ss_pred             cccceeccCccchhhccccCccccCHHHhcCCCCCCccchH
Confidence            99888654332   345788999999999998999999984

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.95  E-value=1.3e-26  Score=195.02  Aligned_cols=178  Identities=28%  Similarity=0.399  Sum_probs=140.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++.........++..+|+|.+... .......+.+|+.+++++ +||||+++++++...+..+++|||
T Consensus        11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   88 (288)
T cd05093          11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEY   88 (288)
T ss_pred             cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc-CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEEEEEc
Confidence            379999999999998643222345677999999764 445567899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++..........    ........+++..+..++.|++.||+|||++|++|||||             ++||
T Consensus        89 ~~~~~L~~~i~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~df  164 (288)
T cd05093          89 MKHGDLNKFLRAHGPDAVLM----AEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF  164 (288)
T ss_pred             CCCCCHHHHHHHcCCccccc----cccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccC
Confidence            99999999998654210000    001122348999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......     ....++..|+|||++.+..++.++||.
T Consensus       165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiw  206 (288)
T cd05093         165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW  206 (288)
T ss_pred             CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHH
Confidence            9987543222     233446789999999998999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.95  E-value=8.7e-27  Score=192.55  Aligned_cols=161  Identities=25%  Similarity=0.477  Sum_probs=139.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHH-HHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||++...     .++..+|+|++........ .....+|+.+++.+ +||||+++++++.+....+++||
T Consensus         5 ~~lg~G~~g~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~   78 (260)
T PF00069_consen    5 KKLGSGGFGTVYKAKNK-----KNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVME   78 (260)
T ss_dssp             EEEEEESSEEEEEEEET-----TTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEE
T ss_pred             EEEEeCCCEEEEEEEEC-----CCCeEEEEEEeccccccccccchhhhhhhccccc-ccccccccccccccccccccccc
Confidence            48999999999999998     6778999999987533322 23446699999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ++++++|.+++.....                 +++..+..++.|++.||.|||+++++|+|||             ++|
T Consensus        79 ~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~D  141 (260)
T PF00069_consen   79 YCPGGSLQDYLQKNKP-----------------LSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLID  141 (260)
T ss_dssp             EETTEBHHHHHHHHSS-----------------BBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESS
T ss_pred             cccccccccccccccc-----------------ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999996554                 8999999999999999999999999999996             789


Q ss_pred             CCcceee---eccCCccccccccccccccc-cCCCCccccee
Q psy12228        218 FDLCILV---FFHDSTLLKTTSTIASLILR-NQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~---~~~~~~~~gt~~y~aPE~~~-~~~~s~~~Dv~  255 (258)
                      ||++...   ........++..|+|||++. +..++.++||.
T Consensus       142 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  183 (260)
T PF00069_consen  142 FGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIW  183 (260)
T ss_dssp             GTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc
Confidence            9999753   11225678899999999998 88889999984

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=6.1e-27  Score=208.43  Aligned_cols=157  Identities=15%  Similarity=0.132  Sum_probs=134.1

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      .....||+|+||.||++...     .++..||||....       ..+.+|+.+++++ +|+|||++++++..++..++|
T Consensus       172 ~i~~~Lg~G~~G~Vy~a~~~-----~~~~~vavK~~~~-------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~lv  238 (461)
T PHA03211        172 AIHRALTPGSEGCVFESSHP-----DYPQRVVVKAGWY-------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCLV  238 (461)
T ss_pred             EEEEEEccCCCeEEEEEEEC-----CCCCEEEEecccc-------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEE
Confidence            34457999999999999987     5678999996432       2356899999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      ||++. ++|.+++.....                .+++.+++.|+.||+.||.|||++||+|||||             +
T Consensus       239 ~e~~~-~~L~~~l~~~~~----------------~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL  301 (461)
T PHA03211        239 LPKYR-SDLYTYLGARLR----------------PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICL  301 (461)
T ss_pred             EEccC-CCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEE
Confidence            99996 699999876432                38999999999999999999999999999996             7


Q ss_pred             cCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......     ....||+.|+|||++.+..++.++||.
T Consensus       302 ~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvw  346 (461)
T PHA03211        302 GDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIW  346 (461)
T ss_pred             cccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHH
Confidence            8999998653322     245799999999999999999999984

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.95  E-value=1.7e-26  Score=194.28  Aligned_cols=175  Identities=26%  Similarity=0.379  Sum_probs=138.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|..++......+..||+|.++..........+.+|+.+++.+ +||||+++++++.+.+..++||||+
T Consensus        13 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~   91 (288)
T cd05061          13 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCHHVVRLLGVVSKGQPTLVVMELM   91 (288)
T ss_pred             eecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEEEeCC
Confidence            899999999999987633333446789999987654445556788999999999 9999999999999988999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++........       .......+++..+..++.|++.||.|||+++|+|||||             ++|||
T Consensus        92 ~~g~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg  164 (288)
T cd05061          92 AHGDLKSYLRSLRPEAE-------NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG  164 (288)
T ss_pred             CCCCHHHHHHHhccccc-------cCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCC
Confidence            99999999986432100       00012336788899999999999999999999999996             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......     ....++..|+|||++.+..++.++||.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dvw  205 (288)
T cd05061         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMW  205 (288)
T ss_pred             ccccccccccccccCCCcccccccCHHHhccCCCChHhHHH
Confidence            987543322     223446789999999998999999963

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=1e-26  Score=193.13  Aligned_cols=164  Identities=20%  Similarity=0.234  Sum_probs=131.2

Q ss_pred             eeeecCceEEEEEEEccccc-------CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE
Q psy12228         73 VKIKCAFGKVICAEANGILK-------QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~  145 (258)
                      .||+|+||.||+|.......       ......|++|++... .......+.+|+.+++.+ +||||+++++++..+...
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~~~~   79 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS-HRDISLAFFETASMMRQV-SHKHIVLLYGVCVRDVEN   79 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh-hhhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCC
Confidence            68999999999998642111       123357899998754 334456788999999999 999999999999998899


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +++|||+++|+|..++.....                .+++..++.++.||+.||+|||+++|+|||||           
T Consensus        80 ~lv~e~~~~~~l~~~~~~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~  143 (262)
T cd05077          80 IMVEEFVEFGPLDLFMHRKSD----------------VLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGI  143 (262)
T ss_pred             EEEEecccCCCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCc
Confidence            999999999999999876432                38999999999999999999999999999996           


Q ss_pred             ---------ccCCCcceeeeccCCccccccccccccccc-cCCCCccccee
Q psy12228        215 ---------FIGFDLCILVFFHDSTLLKTTSTIASLILR-NQKVSVLLDLI  255 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~Dv~  255 (258)
                               ++|||++.... ......++..|+|||++. +..++.++||.
T Consensus       144 ~~~~~~~~~l~d~g~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw  193 (262)
T cd05077         144 DGECGPFIKLSDPGIPITVL-SRQECVERIPWIAPECVEDSKNLSIAADKW  193 (262)
T ss_pred             cCCCCceeEeCCCCCCcccc-CcccccccccccChhhhcCCCCCCchhHHH
Confidence                     34666665322 223456788999999987 46789999984

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.6e-26  Score=193.04  Aligned_cols=176  Identities=25%  Similarity=0.357  Sum_probs=142.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.........++..||+|.+...........+.+|+.+++.+ +|+||+++++++......++||||
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~   90 (277)
T cd05032          12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSTGQPTLVVMEL   90 (277)
T ss_pred             eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCCCCcEEEEec
Confidence            3899999999999998743333456889999997654555667899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++........       .......+++..+..++.|++.||.|||+++++|||||             ++||
T Consensus        91 ~~~~~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~df  163 (277)
T cd05032          91 MAKGDLKSYLRSRRPEAE-------NNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDF  163 (277)
T ss_pred             CCCCCHHHHHHhcccchh-------hccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCc
Confidence            999999999986542100       00012347899999999999999999999999999995             7899


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......     ....++..|+|||.+.+..++.++||.
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  205 (277)
T cd05032         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVW  205 (277)
T ss_pred             ccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchH
Confidence            9987543322     234567889999999988899999974

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.95  E-value=1.2e-26  Score=193.59  Aligned_cols=174  Identities=25%  Similarity=0.390  Sum_probs=139.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|..+..........|++|.+.........+.+.+|+.+++++ +|+||+++++++.+.+..++||||+
T Consensus        12 ~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~   90 (275)
T cd05046          12 TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAEPHYMILEYT   90 (275)
T ss_pred             eecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCCcceEEEEec
Confidence            799999999999998643333456789999997654444567899999999999 9999999999999888999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.......        .......+++..+..++.|++.||.|||+++|+|||||             ++|||
T Consensus        91 ~~~~L~~~i~~~~~~~--------~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~  162 (275)
T cd05046          91 DLGDLKQFLRATKSKD--------EKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLS  162 (275)
T ss_pred             CCCcHHHHHHhccccc--------ccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccc
Confidence            9999999998765210        00111248999999999999999999999999999996             67888


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......    ....++..|+|||.+.+..++.++||.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  202 (275)
T cd05046         163 LSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVW  202 (275)
T ss_pred             cccccCcccccccCCceeEEeecChhhhccCCCCchhhHH
Confidence            876432221    234556789999999888889999973

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.95  E-value=2.4e-26  Score=191.26  Aligned_cols=166  Identities=20%  Similarity=0.293  Sum_probs=136.8

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      .....||+|+||.||+|...     .++..||+|.+... .....+.+.+|+.+++.+ +|+||+++++++..++..+++
T Consensus        11 ~~~~~lg~g~~g~v~~~~~~-----~~~~~v~~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv   83 (268)
T cd06624          11 GERVVLGKGTYGIVYAARDL-----STQVRIAIKEIPER-DSRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIF   83 (268)
T ss_pred             CceEEEecCCceEEEEeEec-----CCCcEEEEEEecCC-CHHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEE
Confidence            34458999999999999986     56789999998764 344556799999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------  214 (258)
                      +||+++++|.+++......              ...++..+..++.||+.||.|||+++|+|||||              
T Consensus        84 ~e~~~~~~L~~~l~~~~~~--------------~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~  149 (268)
T cd06624          84 MEQVPGGSLSALLRSKWGP--------------LKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVK  149 (268)
T ss_pred             EecCCCCCHHHHHHHhccc--------------CCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEE
Confidence            9999999999999865320              012888899999999999999999999999996              


Q ss_pred             ccCCCcceeeeccC---CccccccccccccccccC--CCCccccee
Q psy12228        215 FIGFDLCILVFFHD---STLLKTTSTIASLILRNQ--KVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~--~~s~~~Dv~  255 (258)
                      ++|||++.......   ....+++.|+|||++.+.  .++.++||.
T Consensus       150 l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~  195 (268)
T cd06624         150 ISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIW  195 (268)
T ss_pred             EecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhH
Confidence            67888876543221   345678999999998664  378899974

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.95  E-value=1.1e-26  Score=197.98  Aligned_cols=168  Identities=20%  Similarity=0.277  Sum_probs=131.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv~  149 (258)
                      .+||+|+||.||+|....   ..++..||+|.++....   ...+.+|+.+++.+ +||||+++++++..  +..++++|
T Consensus         7 ~~lG~G~~g~Vy~~~~~~---~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKD---GKDDRDYALKQIEGTGI---SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLF   79 (317)
T ss_pred             cccccCCCeEEEEEEEcc---CCCCceEEEEEECCCCC---cHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEE
Confidence            479999999999998752   13568899999975422   23477899999999 99999999999864  44689999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------  214 (258)
                      ||+.+ +|.+++.......        .......+++..+..++.||+.||.|||++||+|||||               
T Consensus        80 e~~~~-~l~~~~~~~~~~~--------~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~  150 (317)
T cd07868          80 DYAEH-DLWHIIKFHRASK--------ANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR  150 (317)
T ss_pred             eccCC-CHHHHHHhccccc--------ccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCc
Confidence            99975 9999887543210        00112348999999999999999999999999999996               


Q ss_pred             --ccCCCcceeeecc------CCcccccccccccccccc-CCCCccccee
Q psy12228        215 --FIGFDLCILVFFH------DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                        ++|||+++.....      .....+|+.|+|||++.+ ..++.++||-
T Consensus       151 ~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  200 (317)
T cd07868         151 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW  200 (317)
T ss_pred             EEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHH
Confidence              6899999764322      135678999999999977 4579999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0986|consensus

Probab=99.94  E-value=4e-28  Score=205.32  Aligned_cols=178  Identities=16%  Similarity=0.185  Sum_probs=152.1

Q ss_pred             ceeeeeceeeec--cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcc
Q psy12228         57 VSLINVLTVTIN--SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINI  132 (258)
Q Consensus        57 ~~~~~~~~~~~~--~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nI  132 (258)
                      +.+.+....+.+  ..-.+||+|+||.|+-+..+     .+|+.+|.|.+.+..  ........++|-.+|..+ +.+.|
T Consensus       174 WK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvr-----aTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~Fi  247 (591)
T KOG0986|consen  174 WKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVR-----ATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFI  247 (591)
T ss_pred             HHHHHhhhccccceeeeEEEecccccceeEEEEe-----cchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcE
Confidence            334455566666  55568999999999999998     689999999985321  233345678999999999 99999


Q ss_pred             cceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy12228        133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDA  212 (258)
Q Consensus       133 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~D  212 (258)
                      |.+-.+|++.+.+|+|+..|+||||.-+|-+.+.               ..+++..++.|+.+|+-||++||..+||.||
T Consensus       248 VslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~---------------~gF~e~ra~FYAAEi~cGLehlH~~~iVYRD  312 (591)
T KOG0986|consen  248 VSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGN---------------PGFDEQRARFYAAEIICGLEHLHRRRIVYRD  312 (591)
T ss_pred             EEEeeeecCCCceEEEEEeecCCceeEEeeccCC---------------CCCchHHHHHHHHHHHhhHHHHHhcceeecc
Confidence            9999999999999999999999999999988774               3499999999999999999999999999999


Q ss_pred             cc-------------ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        213 VR-------------FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       213 lK-------------i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||             |+|.|||.....+.  ...+||.+|||||++.++.|+.+.|+.
T Consensus       313 LKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf  370 (591)
T KOG0986|consen  313 LKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWF  370 (591)
T ss_pred             CChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHH
Confidence            98             78899998776665  466999999999999999999999974

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.94  E-value=1.9e-26  Score=190.36  Aligned_cols=172  Identities=35%  Similarity=0.499  Sum_probs=141.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|......  ..+..||+|.++........+.+.+|+..++.+ +|+||+++++++.+....+++|||+
T Consensus         2 ~ig~g~~g~v~~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~   78 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKD--GKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEYM   78 (262)
T ss_pred             ccccCCceEEEEEEEecCC--CCCceEEeEeeccccchhHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEec
Confidence            6899999999999987210  226889999998765544567899999999999 7999999999999988999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++.......        .......+++..+..++.|++.||.|||+++++|+|||             ++|||
T Consensus        79 ~~~~L~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg  150 (262)
T cd00192          79 EGGDLLDYLRKSRPVF--------PSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFG  150 (262)
T ss_pred             cCCcHHHHHhhccccc--------cccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccc
Confidence            9999999998762100        00011348999999999999999999999999999995             78999


Q ss_pred             cceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      .+......     .....++..|+|||.+....++.++||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  191 (262)
T cd00192         151 LSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVW  191 (262)
T ss_pred             cccccccccccccccCCCcCccccCHHHhccCCcchhhccH
Confidence            98865443     2345677899999999988899999975

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.94  E-value=1.4e-26  Score=193.06  Aligned_cols=179  Identities=31%  Similarity=0.430  Sum_probs=137.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||+|.....   +....+|+|.++........+.+.+|+.++.++++||||+++++++...+..+++|||+
T Consensus         2 ~lg~g~~g~v~~~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (270)
T cd05047           2 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   78 (270)
T ss_pred             cCCCCCCceEEEEEEcCC---CCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence            689999999999998621   12246799999865455566789999999999978999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++....... ..............+++..+..++.|++.||+|||+++++|||||             ++|||
T Consensus        79 ~~~~L~~~i~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          79 PHGNLLDFLRKSRVLE-TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CCCcHHHHHHhccccc-cccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCC
Confidence            9999999998754210 000000011122358999999999999999999999999999996             78999


Q ss_pred             cceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......  .....+..|+|||++.+..++.++||.
T Consensus       158 l~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~  195 (270)
T cd05047         158 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW  195 (270)
T ss_pred             CccccchhhhccCCCCccccCChHHHccCCCCchhhHH
Confidence            886322211  222335679999999998999999974

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.94  E-value=1.8e-26  Score=193.01  Aligned_cols=172  Identities=25%  Similarity=0.357  Sum_probs=139.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.+.+...+..+..||+|.+...........|.+|+.+++.+ +|+||+++++++.+.+..+++|||+
T Consensus        13 ~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~   91 (277)
T cd05036          13 ALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERLPRFILLELM   91 (277)
T ss_pred             ECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCcEEEEecC
Confidence            799999999999998732222267889999997655555567799999999999 9999999999999888999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------cc
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------FI  216 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i~  216 (258)
                      ++|+|.+++...+...          .....+++..++.++.||+.||.|||+++++|||||                ++
T Consensus        92 ~g~~L~~~i~~~~~~~----------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          92 AGGDLKSFLRENRPRP----------ERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             CCCCHHHHHHHhCCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence            9999999998765310          112348999999999999999999999999999985                67


Q ss_pred             CCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++......     .....+..|+|||++.+..+++++||.
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  205 (277)
T cd05036         162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVW  205 (277)
T ss_pred             cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHH
Confidence            889887542221     122334679999999998999999984

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.94  E-value=3.2e-26  Score=190.15  Aligned_cols=162  Identities=19%  Similarity=0.257  Sum_probs=136.2

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC----ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--Cc
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH----SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GP  144 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~  144 (258)
                      ...||+|+||.||.+...     .++..||+|.+....    .....+.+.+|+.+++.+ +||||+++++++.+.  ..
T Consensus         7 ~~~l~~g~~g~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   80 (265)
T cd06652           7 GKLLGQGAFGRVYLCYDA-----DTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERT   80 (265)
T ss_pred             eeEEecCCceEEEEEEEc-----CCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCce
Confidence            348999999999999987     578899999985321    223456788999999999 999999999998764  45


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      ++++|||+++|+|.+++.....                 +++..+..++.|++.||.|||+++++|+|||          
T Consensus        81 ~~~v~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~  143 (265)
T cd06652          81 LSIFMEHMPGGSIKDQLKSYGA-----------------LTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG  143 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC
Confidence            8899999999999999987654                 8899999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeecc------CCccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFH------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||++......      .....++..|+|||++.+..++.++||.
T Consensus       144 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  193 (265)
T cd06652         144 NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIW  193 (265)
T ss_pred             CEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHH
Confidence               7899988754321      2345688899999999998899999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG1152|consensus

Probab=99.94  E-value=9.4e-28  Score=208.15  Aligned_cols=159  Identities=21%  Similarity=0.255  Sum_probs=137.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-------ChHHHHHHHHHHHHHHHhcC---CCcccceeeeEEcC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-------SDAEMMDLVSEMEMMKMIGQ---HINIINLLGVCTQD  142 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~---h~nIv~l~~~~~~~  142 (258)
                      .+|+|+||.|++|.++     .....|+||.|.++.       .+...-.+-.|+.+|..+ +   |+||++++++|+++
T Consensus       568 ~lG~GAyGkV~lai~K-----~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l-~~~sH~NIlKlLdfFEdd  641 (772)
T KOG1152|consen  568 PLGEGAYGKVNLAIHK-----ENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATL-NKHSHENILKLLDFFEDD  641 (772)
T ss_pred             eccccccceEEEeeec-----ccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHh-hhcCccchhhhhheeecC
Confidence            6899999999999998     567899999997542       111122355799999999 6   99999999999999


Q ss_pred             CcEEEEEEeC-CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------
Q psy12228        143 GPLYVIVEFA-PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------  214 (258)
Q Consensus       143 ~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------  214 (258)
                      +++||+||-- ++-+|.+++.....                 +++..+..|+.|++.|+++||+.||||||||       
T Consensus       642 d~yyl~te~hg~gIDLFd~IE~kp~-----------------m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd  704 (772)
T KOG1152|consen  642 DYYYLETEVHGEGIDLFDFIEFKPR-----------------MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD  704 (772)
T ss_pred             CeeEEEecCCCCCcchhhhhhccCc-----------------cchHHHHHHHHHHHhccccccccCceecccccccEEEe
Confidence            9999999965 56699999998776                 9999999999999999999999999999996       


Q ss_pred             ------ccCCCcceeeeccC-CccccccccccccccccCCC-Ccccce
Q psy12228        215 ------FIGFDLCILVFFHD-STLLKTTSTIASLILRNQKV-SVLLDL  254 (258)
Q Consensus       215 ------i~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~-s~~~Dv  254 (258)
                            ++|||.+...+.++ ..++||..|.|||++.|.+| +..-||
T Consensus       705 ~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdi  752 (772)
T KOG1152|consen  705 SNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDI  752 (772)
T ss_pred             cCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchh
Confidence                  89999999888777 58899999999999999998 444554

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=9.7e-27  Score=200.60  Aligned_cols=159  Identities=21%  Similarity=0.287  Sum_probs=133.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC------Cc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD------GP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~------~~  144 (258)
                      ..||+|+||.||+|...     .++..||||.+..... ......+.+|+.+++.+ +||||+++++++...      ..
T Consensus        21 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07878          21 TPVGSGAYGSVCSAYDT-----RLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIENFNE   94 (343)
T ss_pred             eecccCCCeEEEEEEEC-----CCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-CCCchhhhhhhhcccccccccCc
Confidence            37999999999999987     5778999999975322 23345688999999999 999999999988643      34


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++++|++ +++|.+++... .                 +++..+..++.||+.||.|||+++|+|||||          
T Consensus        95 ~~~~~~~~-~~~l~~~~~~~-~-----------------l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~  155 (343)
T cd07878          95 VYLVTNLM-GADLNNIVKCQ-K-----------------LSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC  155 (343)
T ss_pred             EEEEeecC-CCCHHHHHhcC-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCC
Confidence            78999988 56998877542 2                 8999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                         ++|||+++..........||+.|+|||++.+ ..++.++||.
T Consensus       156 ~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  200 (343)
T cd07878         156 ELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW  200 (343)
T ss_pred             CEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhH
Confidence               7899999876555566789999999999877 5689999974

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=2.5e-26  Score=192.90  Aligned_cols=165  Identities=27%  Similarity=0.375  Sum_probs=137.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv~e  150 (258)
                      .||+|+||.||.+.... ....++..||+|.++..........+.+|+.+++.+ +||||+++++++...  ...++|||
T Consensus        11 ~lg~g~~g~v~~~~~~~-~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e   88 (284)
T cd05079          11 DLGEGHFGKVELCRYDP-EGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIME   88 (284)
T ss_pred             ecCCCCceeEEEEEEcc-CCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCCceEEEEE
Confidence            79999999999998641 112457899999998665555667899999999999 999999999999875  56899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....                .+++..+..++.|++.||.|||++|++|||||             ++|
T Consensus        89 ~~~g~~L~~~l~~~~~----------------~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~d  152 (284)
T cd05079          89 FLPSGSLKEYLPRNKN----------------KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD  152 (284)
T ss_pred             ccCCCCHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECC
Confidence            9999999999976432                38999999999999999999999999999996             679


Q ss_pred             CCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......      ....++..|+|||++.+..++.++||.
T Consensus       153 fg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~  196 (284)
T cd05079         153 FGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVW  196 (284)
T ss_pred             CccccccccCccceeecCCCCCCccccCHHHhccCCCCccccch
Confidence            99987543322      234566789999999988999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.94  E-value=2.6e-26  Score=188.94  Aligned_cols=160  Identities=30%  Similarity=0.400  Sum_probs=135.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||+|...      ++..+|+|.++..........+.+|+.+++.+ +||||+++++++...+..++||||+
T Consensus         2 ~ig~g~~g~vy~~~~~------~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   74 (250)
T cd05085           2 LLGKGNFGEVFKGTLK------DKTPVAVKTCKEDLPQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELV   74 (250)
T ss_pred             ccCCCCCceEEEEEec------CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECC
Confidence            6899999999999864      46789999998765555556799999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..+..++.|++.||.|||+++++|||||             ++|||
T Consensus        75 ~~~~L~~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g  138 (250)
T cd05085          75 PGGDFLSFLRKKKD----------------ELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFG  138 (250)
T ss_pred             CCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCc
Confidence            99999999876432                27899999999999999999999999999996             68999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......    ....++..|+|||++.+..++.++||.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  178 (250)
T cd05085         139 MSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVW  178 (250)
T ss_pred             cceeccccccccCCCCCCcccccCHHHhccCCCCchhHHH
Confidence            987533221    122335679999999988899999974

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.94  E-value=2.5e-26  Score=190.88  Aligned_cols=162  Identities=22%  Similarity=0.301  Sum_probs=138.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-----hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-----DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL  145 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~  145 (258)
                      ...||+|+||.||++...     .++..||+|+++....     ....+.+.+|+.+++.+ +|+||+++++++.+.+..
T Consensus         5 ~~~lg~g~~~~v~~~~~~-----~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~   78 (268)
T cd06630           5 GQQLGTGAFSSCYQARDV-----KTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHF   78 (268)
T ss_pred             cceecCcCceEEEEEEEc-----CCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeE
Confidence            348999999999999876     5778999999964321     12356789999999999 999999999999999999


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++|+||+++++|.+++.....                 +++..+..++.|++.||.|||++|++|+|||           
T Consensus        79 ~~v~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~  141 (268)
T cd06630          79 NLFVEWMAGGSVSHLLSKYGA-----------------FKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ  141 (268)
T ss_pred             EEEEeccCCCcHHHHHHHhCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence            999999999999999987654                 8999999999999999999999999999995           


Q ss_pred             ---ccCCCcceeeecc-------CCccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFH-------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||++......       .....++..|+|||++.+..++.++||.
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~  192 (268)
T cd06630         142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVW  192 (268)
T ss_pred             EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchH
Confidence               6889888654322       1235678899999999988999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=1.4e-26  Score=203.17  Aligned_cols=157  Identities=18%  Similarity=0.217  Sum_probs=133.2

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||++...+   ...+..||+|.+...      ....+|+.+++.+ +||||+++++++...+..+++||
T Consensus        97 ~~~Lg~G~~g~Vy~~~~~~---~~~~~~v~vK~~~~~------~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~e  166 (392)
T PHA03207         97 LSSLTPGSEGEVFVCTKHG---DEQRKKVIVKAVTGG------KTPGREIDILKTI-SHRAIINLIHAYRWKSTVCMVMP  166 (392)
T ss_pred             EEeecCCCCeEEEEEEEcC---CccceeEEEEecccc------ccHHHHHHHHHhc-CCCCccceeeeEeeCCEEEEEeh
Confidence            3479999999999998652   135688999998653      1345899999999 99999999999999899999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ++. ++|.+++.....                 +++..++.|+.||+.||.|||++||+|||||             ++|
T Consensus       167 ~~~-~~l~~~l~~~~~-----------------l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~D  228 (392)
T PHA03207        167 KYK-CDLFTYVDRSGP-----------------LPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGD  228 (392)
T ss_pred             hcC-CCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcc
Confidence            997 599999965444                 8999999999999999999999999999996             789


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....||+.|+|||++.+..++.++||.
T Consensus       229 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvw  271 (392)
T PHA03207        229 FGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIW  271 (392)
T ss_pred             CccccccCcccccccccccccccCccCHhHhcCCCCCchhhHH
Confidence            99987644332     246799999999999999999999984

>KOG0604|consensus

Probab=99.94  E-value=9.2e-28  Score=193.82  Aligned_cols=157  Identities=19%  Similarity=0.209  Sum_probs=136.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPLYV  147 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~~l  147 (258)
                      .+||-|-.|+|..|..+     .++..+|+|++...  .    ...+|++..-..+.|||||.++++|..    ...+.+
T Consensus        68 qvLG~GinGkV~~C~~k-----~T~ekfALKvL~Ds--~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLi  136 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHK-----RTQEKFALKVLLDS--P----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLI  136 (400)
T ss_pred             hhhccccCCceEEEEec-----cchhhhHHHHHhcC--H----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEe
Confidence            48999999999999998     79999999999752  2    345777776666689999999999864    235889


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      |||+|+||.|.+.+..++.               ..+++.++..|+.||+.|+.|||+.+|.|||||             
T Consensus       137 VmE~meGGeLfsriq~~g~---------------~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na  201 (400)
T KOG0604|consen  137 VMECMEGGELFSRIQDRGD---------------QAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNA  201 (400)
T ss_pred             eeecccchHHHHHHHHccc---------------ccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCc
Confidence            9999999999999999876               569999999999999999999999999999995             


Q ss_pred             ---ccCCCcceeeecc--CCccccccccccccccccCCCCcccce
Q psy12228        215 ---FIGFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 ---i~dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                         ++|||+|+.....  -.+.+-||.|.|||++..++|+.++|+
T Consensus       202 ~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdm  246 (400)
T KOG0604|consen  202 PLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDM  246 (400)
T ss_pred             ceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCc
Confidence               8899999976533  257888999999999999999999986

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.94  E-value=5.2e-26  Score=193.77  Aligned_cols=183  Identities=45%  Similarity=0.608  Sum_probs=141.1

Q ss_pred             eeeeecCceEEEEEEEccccc--CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILK--QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...+...  ......+|+|.++..........+.+|+.+++.+.+||||+++++++...+..+++|
T Consensus        18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~   97 (314)
T cd05099          18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIV   97 (314)
T ss_pred             eeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEE
Confidence            389999999999998642111  124567999999865555666789999999999966999999999999888999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++....... ..............+++..+..++.|++.||.|||++|++|||||             ++
T Consensus        98 e~~~~g~L~~~i~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~  176 (314)
T cd05099          98 EYAAKGNLREFLRARRPPG-PDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIA  176 (314)
T ss_pred             ecCCCCcHHHHHHhcCCCc-ccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEc
Confidence            9999999999998754210 000011111123458999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++......     ....++..|+|||++.+..++.++||.
T Consensus       177 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  220 (314)
T cd05099         177 DFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVW  220 (314)
T ss_pred             cccccccccccccccccccCCCCccccCHHHHccCCcCccchhh
Confidence            999997543322     122334679999999998999999984

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.94  E-value=2.7e-26  Score=193.97  Aligned_cols=181  Identities=33%  Similarity=0.429  Sum_probs=137.9

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.....   .....+++|.++........+.+.+|+.++.++.+||||+++++++...+..++++|
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e   83 (297)
T cd05089           7 EDVIGEGNFGQVIRAMIKKD---GLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIE   83 (297)
T ss_pred             eeeecCCCcceEEEEEecCC---CCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEE
Confidence            34899999999999988621   122457899887544555567899999999999679999999999999889999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++........ .............+++..++.++.|++.||+|||++||+|||||             ++|
T Consensus        84 ~~~~~~L~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~d  162 (297)
T cd05089          84 YAPYGNLLDFLRKSRVLET-DPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIAD  162 (297)
T ss_pred             ecCCCcHHHHHHhcccccc-ccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECC
Confidence            9999999999976542100 00000011122358999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......  .....+..|+|||++.+..++.++||.
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  202 (297)
T cd05089         163 FGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVW  202 (297)
T ss_pred             cCCCccccceeccCCCCcCccccCchhhccCCCCchhhHH
Confidence            99886432221  122234579999999998999999984

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.94  E-value=2.5e-26  Score=191.07  Aligned_cols=165  Identities=26%  Similarity=0.313  Sum_probs=137.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.....  ......+|+|.++........+.+.+|+.+++.+ +||||+++++++..++..+++|||
T Consensus        10 ~~lg~g~~g~v~~~~~~~~--~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   86 (267)
T cd05066          10 KVIGAGEFGEVCSGRLKLP--GKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPVMIVTEY   86 (267)
T ss_pred             eeecccCCCceEEEEEecC--CCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEEEEEc
Confidence            4899999999999987521  1234589999998655556667899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++.++..++.|++.||.|||+++++|||||             ++||
T Consensus        87 ~~~~~L~~~~~~~~~----------------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~df  150 (267)
T cd05066          87 MENGSLDAFLRKHDG----------------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDF  150 (267)
T ss_pred             CCCCCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCC
Confidence            999999999976532                28999999999999999999999999999996             6899


Q ss_pred             CcceeeeccCC------ccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHDS------TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~~------~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++........      ...++..|+|||++.+..++.++||.
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~  193 (267)
T cd05066         151 GLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW  193 (267)
T ss_pred             CcccccccccceeeecCCCccceeecCHhHhccCccCchhhhH
Confidence            99876543321      12234679999999998999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.94  E-value=1.7e-26  Score=200.00  Aligned_cols=158  Identities=22%  Similarity=0.231  Sum_probs=132.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------c
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------P  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------~  144 (258)
                      ..||+|+||.||++...     .++..||+|.+.... .......+.+|+.+++.+ +||||+++++++....      .
T Consensus        23 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~   96 (355)
T cd07874          23 KPIGSGAQGIVCAAYDA-----VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLEEFQD   96 (355)
T ss_pred             EEeeecCCEEEEEEEec-----CCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh-CCCchhceeeeeeccccccccce
Confidence            37999999999999876     577899999997543 334456788999999999 9999999999886432      4


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++||||+++ +|.+++..  .                 +++..+..++.|++.||.|||++||+|||||          
T Consensus        97 ~~lv~e~~~~-~l~~~~~~--~-----------------l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~  156 (355)
T cd07874          97 VYLVMELMDA-NLCQVIQM--E-----------------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  156 (355)
T ss_pred             eEEEhhhhcc-cHHHHHhh--c-----------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC
Confidence            7999999975 78777753  2                 7889999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++......  ....+|+.|+|||++.+..++.++||.
T Consensus       157 ~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw  202 (355)
T cd07874         157 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW  202 (355)
T ss_pred             CEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHH
Confidence               78999998643332  456789999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=2.1e-26  Score=194.40  Aligned_cols=177  Identities=28%  Similarity=0.396  Sum_probs=138.6

Q ss_pred             eeeecCceEEEEEEEcccc---------cCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC
Q psy12228         73 VKIKCAFGKVICAEANGIL---------KQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG  143 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~---------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~  143 (258)
                      .||+|+||.||++...+..         .......||+|.++..........|.+|+++++++ +|+||+++++++...+
T Consensus        12 ~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~   90 (295)
T cd05097          12 KLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-KNPNIIRLLGVCVSDD   90 (295)
T ss_pred             ccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEcCCC
Confidence            7999999999999875211         01234569999998765666667899999999999 9999999999999999


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      ..++||||+++++|.+++.........+     .......+++..++.++.|++.||.|||+++++|||||         
T Consensus        91 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~  165 (295)
T cd05097          91 PLCMITEYMENGDLNQFLSQREIESTFT-----HANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH  165 (295)
T ss_pred             ccEEEEecCCCCcHHHHHHhcccccccc-----ccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCC
Confidence            9999999999999999997643100000     00112237899999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||++.......     ....++..|+|||++.+..++.++||.
T Consensus       166 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  215 (295)
T cd05097         166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVW  215 (295)
T ss_pred             CcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHH
Confidence                78999987543322     223446789999999988999999974

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=2.1e-26  Score=192.79  Aligned_cols=165  Identities=21%  Similarity=0.310  Sum_probs=135.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||+|.+..... .....||+|+++..........+.+|+.++..+ +|+||+.+++++... ..++++||
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~-~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~l~~~~   89 (279)
T cd05109          13 KVLGSGAFGTVYKGIWIPDGE-NVKIPVAIKVLRENTSPKANKEILDEAYVMAGV-GSPYVCRLLGICLTS-TVQLVTQL   89 (279)
T ss_pred             eecCCCCCceEEEEEEecCCC-ccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcCC-CcEEEEEc
Confidence            389999999999999762111 112468999998665666667899999999999 999999999999754 57899999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..+..++.|++.||.|||+++|+|||||             ++||
T Consensus        90 ~~~g~l~~~l~~~~~----------------~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~df  153 (279)
T cd05109          90 MPYGCLLDYVRENKD----------------RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDF  153 (279)
T ss_pred             CCCCCHHHHHhhccC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCC
Confidence            999999999976432                38999999999999999999999999999995             7899


Q ss_pred             CcceeeeccCC-----ccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHDS-----TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++.......     ...++..|+|||.+.+..++.++||.
T Consensus       154 G~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  195 (279)
T cd05109         154 GLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVW  195 (279)
T ss_pred             CceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHH
Confidence            99986543321     22345789999999998999999974

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.94  E-value=2.6e-26  Score=190.25  Aligned_cols=159  Identities=26%  Similarity=0.384  Sum_probs=134.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||+|...      .+..||+|.+...  ....+.+.+|+.+++.+ +|+||+++++++...+..+++|||+
T Consensus        13 ~lg~g~~g~v~~~~~~------~~~~v~iK~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072          13 KLGAGQFGEVWMGYYN------NSTKVAVKTLKPG--TMSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             ecCCcCCceEEEEEec------CCceEEEEEccCC--chhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEEEecC
Confidence            7999999999999865      3467999998753  22356799999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....               ..+++..+..++.|++.||.|||+++++|||||             ++|||
T Consensus        84 ~~~~L~~~l~~~~~---------------~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg  148 (261)
T cd05072          84 AKGSLLDFLKSDEG---------------GKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFG  148 (261)
T ss_pred             CCCcHHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCc
Confidence            99999999976532               338899999999999999999999999999996             78999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......    ....++..|+|||++.+..++.++||.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  188 (261)
T cd05072         149 LARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW  188 (261)
T ss_pred             cceecCCCceeccCCCccceecCCHHHhccCCCChhhhhh
Confidence            998654322    223445689999999988999999985

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=3.6e-26  Score=191.76  Aligned_cols=164  Identities=29%  Similarity=0.357  Sum_probs=135.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv~  149 (258)
                      ..||+|+||.||++.... ....++..||+|.++..........+.+|+.+++.+ +||||+++++++...  ...+++|
T Consensus        10 ~~lg~g~~g~v~~~~~~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~   87 (283)
T cd05080          10 RVLGEGHFGKVSLYCYDP-ANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQGGKGLQLIM   87 (283)
T ss_pred             eecccCCCcEEEEeeEcc-ccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCceEEEEe
Confidence            379999999999877532 122467889999998654545567889999999999 999999999988753  3588999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++....                  +++.+++.++.|++.||.|||+++|+|||||             ++
T Consensus        88 e~~~~~~l~~~~~~~~------------------l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~  149 (283)
T cd05080          88 EYVPLGSLRDYLPKHK------------------LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIG  149 (283)
T ss_pred             cCCCCCCHHHHHHHcC------------------CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEe
Confidence            9999999999997632                  8999999999999999999999999999996             68


Q ss_pred             CCCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++......      ....++..|+|||++.+..++.++||.
T Consensus       150 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~  194 (283)
T cd05080         150 DFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVW  194 (283)
T ss_pred             ecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccH
Confidence            999987644322      123455679999999988999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.3e-26  Score=189.61  Aligned_cols=162  Identities=20%  Similarity=0.272  Sum_probs=138.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC----hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS----DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ...||+|++|.||.+...     .++..||+|.+.....    ......+.+|+.+++++ +||||+++++++..++..+
T Consensus         7 ~~~lg~g~~~~vy~~~~~-----~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   80 (263)
T cd06625           7 GKLLGQGAFGRVYLCYDV-----DTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLS   80 (263)
T ss_pred             cceecCCCceEEEEEEEc-----CCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEE
Confidence            448999999999999876     5678999999864321    22345788999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +++||+++++|.+++.....                 +++..+..++.|++.||.|||+.+++|||||            
T Consensus        81 ~v~e~~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~  143 (263)
T cd06625          81 IFMEYMPGGSVKDQLKAYGA-----------------LTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNV  143 (263)
T ss_pred             EEEEECCCCcHHHHHHHhCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCE
Confidence            99999999999999987654                 8999999999999999999999999999995            


Q ss_pred             -ccCCCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||+++......      ....++..|+|||++.+..++.++||.
T Consensus       144 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  191 (263)
T cd06625         144 KLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVW  191 (263)
T ss_pred             EEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhH
Confidence             78999987543221      235677899999999998999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.94  E-value=2.4e-26  Score=192.65  Aligned_cols=164  Identities=23%  Similarity=0.346  Sum_probs=132.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.+.... ......+++|.+..........++..|+..++.+ .||||+++++++.. ...++++||+
T Consensus        14 ~lg~G~~~~vy~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~~-~~~~~i~e~~   90 (279)
T cd05111          14 LLGSGVFGTVHKGIWIPEG-DSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL-DHAYIVRLLGICPG-ASLQLVTQLS   90 (279)
T ss_pred             ccCccCCcceEEEEEcCCC-CceeeEEEEeecccccchHHHHHHHHHHHHHhcC-CCCCcceEEEEECC-CccEEEEEeC
Confidence            7999999999999985210 1122468889886543444556788899999999 99999999998854 4678999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..+..|+.||+.||.|||+++++|||||             ++|||
T Consensus        91 ~~gsL~~~l~~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg  154 (279)
T cd05111          91 PLGSLLDHVRQHRD----------------SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFG  154 (279)
T ss_pred             CCCcHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCc
Confidence            99999999986542                38999999999999999999999999999995             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......     ....++..|+|||++.+..++.++||.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~  195 (279)
T cd05111         155 VADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVW  195 (279)
T ss_pred             cceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHH
Confidence            998653322     234566789999999988999999974

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.94  E-value=2.8e-26  Score=190.91  Aligned_cols=166  Identities=28%  Similarity=0.325  Sum_probs=137.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.....  ......||+|.++..........|..|+.+++.+ +||||+++++++.+++..++|||
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e   85 (269)
T cd05065           9 EEVIGAGEFGEVCRGRLKLP--GKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVMIITE   85 (269)
T ss_pred             EeEecCCCCCeEEEEEEecC--CCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCceEEEEe
Confidence            34899999999999998631  1123579999998765666678899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++.+++.++.|++.||.|||++|++|+|||             ++|
T Consensus        86 ~~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~d  149 (269)
T cd05065          86 FMENGALDSFLRQNDG----------------QFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSD  149 (269)
T ss_pred             cCCCCcHHHHHhhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECC
Confidence            9999999999976432                28999999999999999999999999999996             679


Q ss_pred             CCcceeeeccCC------ccc--cccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHDS------TLL--KTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~------~~~--gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++........      ...  .+..|+|||++.+..++.++||.
T Consensus       150 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dvw  195 (269)
T cd05065         150 FGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVW  195 (269)
T ss_pred             CccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhh
Confidence            998875433221      111  13579999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0662|consensus

Probab=99.94  E-value=1.2e-27  Score=180.67  Aligned_cols=160  Identities=21%  Similarity=0.241  Sum_probs=139.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH-HHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA-EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .+||+|.||+|++|+.+     .+...||+|.++-..+++ .....++|+.+++.+ +|.|||++++....++.+.+|+|
T Consensus         8 ekigegtygtvfkarn~-----~t~eivalkrvrlddddegvpssalreicllkel-khknivrl~dvlhsdkkltlvfe   81 (292)
T KOG0662|consen    8 EKIGEGTYGTVFKARNR-----ETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_pred             HhhcCCcceeeEecccC-----CccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh-hhcceeehhhhhccCceeEEeHH
Confidence            37999999999999987     688999999997544333 346788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||.. +|..|......                .++....+.++.|+++||.|+|+++++|||+|             ++|
T Consensus        82 ~cdq-dlkkyfdslng----------------~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelklad  144 (292)
T KOG0662|consen   82 FCDQ-DLKKYFDSLNG----------------DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLAD  144 (292)
T ss_pred             HhhH-HHHHHHHhcCC----------------cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecc
Confidence            9987 99999887654                28999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---Ccccccccccccccccc-CCCCcccce
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDL  254 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv  254 (258)
                      ||+++.+..+-   +..+-|.+|.+|.++.+ +-|+++.|+
T Consensus       145 fglarafgipvrcysaevvtlwyrppdvlfgakly~tsidm  185 (292)
T KOG0662|consen  145 FGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM  185 (292)
T ss_pred             cchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHh
Confidence            99999876654   46677899999999887 456888875

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.94  E-value=2.9e-26  Score=192.60  Aligned_cols=163  Identities=20%  Similarity=0.279  Sum_probs=131.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-HHHHHHHHHHHHHHHhc--CCCcccceeeeEEcC-----C
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-AEMMDLVSEMEMMKMIG--QHINIINLLGVCTQD-----G  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~--~h~nIv~l~~~~~~~-----~  143 (258)
                      ..||+|+||.||+|...     .++..||+|.++..... .....+.+|+.+++.+.  +||||+++++++...     .
T Consensus         6 ~~lg~g~~g~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           6 AEIGVGAYGTVYKARDP-----HSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             eEEeecCCeEEEEEEEC-----CCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            37999999999999987     57899999999753222 12234566777776652  699999999988642     3


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      ..+++|||+++ +|.+++.....               ..+++..+..++.|++.||.|||++||+|||||         
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~---------------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~  144 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPP---------------PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG  144 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence            58999999985 99999876432               238999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||+++......  ....+|..|+|||++.+..++.++||.
T Consensus       145 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  191 (288)
T cd07863         145 GQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMW  191 (288)
T ss_pred             CCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhh
Confidence                78999988654332  356788999999999999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.94  E-value=4.5e-26  Score=191.64  Aligned_cols=183  Identities=29%  Similarity=0.373  Sum_probs=143.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++...+.....++..||+|++...........+.+|+.+++.+ .||||+++++++.++...+++|||
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~   89 (288)
T cd05050          11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DHPNIVKLLGVCAVGKPMCLLFEY   89 (288)
T ss_pred             ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCccEEEEec
Confidence            3789999999999997643334567899999998665555667799999999999 999999999999998899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESP-----LGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +++|+|.+++............     ..........+++..++.++.|++.||.|||+++++|||||            
T Consensus        90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~  169 (288)
T cd05050          90 MAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVV  169 (288)
T ss_pred             CCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCce
Confidence            9999999999865431111110     00011223458899999999999999999999999999985            


Q ss_pred             -ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||++.......     .....+..|+|||.+.+..++.++||.
T Consensus       170 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  216 (288)
T cd05050         170 KIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVW  216 (288)
T ss_pred             EECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHH
Confidence             78999987543221     223345679999999998999999974

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.94  E-value=2.6e-26  Score=193.28  Aligned_cols=183  Identities=36%  Similarity=0.454  Sum_probs=141.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.............+|+|.+..........++.+|+.+++.+ +||||+++++.+...+..++++||
T Consensus         6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~   84 (290)
T cd05045           6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGPLLLIVEY   84 (290)
T ss_pred             ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCCcEEEEEe
Confidence            3799999999999987532222344679999998665556667899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCC----C---CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        152 APHGNLRDFLRKHRPSSGYES----P---LGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~----~---~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +++|+|.+++...........    .   .-........+++..++.++.|++.||.|||+++++|||||          
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~  164 (290)
T cd05045          85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGR  164 (290)
T ss_pred             cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCC
Confidence            999999999986432100000    0   00011123458999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++......     ....++..|+|||++.+..++.++||.
T Consensus       165 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~  213 (290)
T cd05045         165 KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVW  213 (290)
T ss_pred             cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHH
Confidence               78999987543221     233456789999999998999999984

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.94  E-value=3.5e-26  Score=190.49  Aligned_cols=166  Identities=17%  Similarity=0.240  Sum_probs=132.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|....   ......+++|.++........+.+.+|+.+++.+ +||||+++++.|.+....++||||+
T Consensus         2 ~lg~G~~g~v~~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~   77 (268)
T cd05086           2 EIGNGWFGKVLLSEIYT---DTGVARVVVKELKANASSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYC   77 (268)
T ss_pred             cCCCCcCceEEEEEEEc---CCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecC
Confidence            58999999999998642   1233567788877654555667899999999999 9999999999999988999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....             ....+++..+..++.||+.||.|||+++++|||||             ++|||
T Consensus        78 ~~~~L~~~l~~~~~-------------~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg  144 (268)
T cd05086          78 ELGDLKSYLSQEQW-------------HRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYG  144 (268)
T ss_pred             CCCcHHHHHHhhhc-------------ccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccc
Confidence            99999999986532             01236778889999999999999999999999996             78999


Q ss_pred             cceeeecc-----CCcccccccccccccccc-------CCCCccccee
Q psy12228        220 LCILVFFH-----DSTLLKTTSTIASLILRN-------QKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~s~~~Dv~  255 (258)
                      ++......     .....++..|+|||++..       ..++.++||.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diw  192 (268)
T cd05086         145 IGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVW  192 (268)
T ss_pred             cccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhH
Confidence            87642211     234567889999999853       2457788874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.94  E-value=4.3e-26  Score=192.14  Aligned_cols=181  Identities=27%  Similarity=0.355  Sum_probs=141.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...+.....+...+++|.++.. .....+.+.+|+.+++++ +|+||+++++++...+..++||||
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   88 (291)
T cd05094          11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNL-QHEHIVKFYGVCGDGDPLIMVFEY   88 (291)
T ss_pred             eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc-cHHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCceEEEEec
Confidence            379999999999998753323345677999998754 444456789999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++........ .............+++..++.++.||+.||.|||+++|+|||||             ++||
T Consensus        89 ~~~~~L~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df  167 (291)
T cd05094          89 MKHGDLNKFLRAHGPDAM-ILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDF  167 (291)
T ss_pred             CCCCcHHHHHHhcCcccc-cccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCC
Confidence            999999999987542100 00000011122348999999999999999999999999999996             6899


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......     ....++..|+|||++.+..++.++||.
T Consensus       168 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  209 (291)
T cd05094         168 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW  209 (291)
T ss_pred             CcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHH
Confidence            9987543321     234567889999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.94  E-value=1.9e-26  Score=190.58  Aligned_cols=162  Identities=20%  Similarity=0.302  Sum_probs=130.7

Q ss_pred             eeeecCceEEEEEEEccccc-----CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILK-----QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      .||+|+||.||+|.......     ......+++|.+......  ...+.+|+.+++.+ +||||+++++++.. ...++
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~l   77 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQL-SHKHLVKLYGVCVR-DENIM   77 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcC-CCcchhheeeEEec-CCcEE
Confidence            68999999999999873210     112256888888654222  56789999999999 99999999999988 77899


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+++|+|.+++.....                .+++..+..++.||+.||.|||+++|+|||||             
T Consensus        78 v~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~  141 (259)
T cd05037          78 VEEYVKFGPLDVFLHREKN----------------NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNE  141 (259)
T ss_pred             EEEcCCCCcHHHHHHhhcc----------------CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCcccc
Confidence            9999999999999987552                28999999999999999999999999999986             


Q ss_pred             -------ccCCCcceeeeccCCccccccccccccccccC--CCCccccee
Q psy12228        215 -------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQ--KVSVLLDLI  255 (258)
Q Consensus       215 -------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~Dv~  255 (258)
                             ++|||++..... .....++..|+|||++.+.  .++.++||.
T Consensus       142 ~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~  190 (259)
T cd05037         142 GYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKW  190 (259)
T ss_pred             CCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHH
Confidence                   457777664332 2344567889999999876  789999974

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=3e-26  Score=192.35  Aligned_cols=160  Identities=18%  Similarity=0.239  Sum_probs=139.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...     .++..||+|++.........+.+.+|+++++.+ +||||+++++++...+..++||||+
T Consensus        12 ~ig~g~~g~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   85 (284)
T cd06620          12 DLGAGNGGSVSKVKHI-----PTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMCMEFM   85 (284)
T ss_pred             HcCCCCCeEEEEEEEc-----CCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEEEecC
Confidence            7899999999999987     567899999987654555567899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------------ccCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------------FIGF  218 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------------i~df  218 (258)
                      ++|+|.+++...+.                 +++..+..++.+++.||.|||+ .+++|||||             ++||
T Consensus        86 ~~~~L~~~~~~~~~-----------------~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~  148 (284)
T cd06620          86 DCGSLDRIYKKGGP-----------------IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDF  148 (284)
T ss_pred             CCCCHHHHHHhccC-----------------CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccC
Confidence            99999999887554                 8999999999999999999997 599999996             7899


Q ss_pred             Ccceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++...... .....|+..|+|||++.+..++.++||.
T Consensus       149 gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~  186 (284)
T cd06620         149 GVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVW  186 (284)
T ss_pred             CcccchhhhccCccccCcccCCHHHHccCCCCccchHH
Confidence            988653222 2456789999999999888899999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.94  E-value=4.6e-26  Score=190.98  Aligned_cols=161  Identities=17%  Similarity=0.198  Sum_probs=129.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHh--cCCCcccceeeeEEcCCcEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMI--GQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l--~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      +||+|+||.||++...     .++..+|+|.+.....  ......+.+|..+++.+  .+||||+.+++++..++..++|
T Consensus         1 ~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv   75 (279)
T cd05633           1 IIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFI   75 (279)
T ss_pred             CcccCCCeEEEEEEEC-----CCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEE
Confidence            4799999999999987     5778999999965322  12223344554444333  2799999999999988899999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++.....                 +++..+..++.|++.||.|||+++|+|||||             +
T Consensus        76 ~e~~~~~~L~~~i~~~~~-----------------l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l  138 (279)
T cd05633          76 LDLMNGGDLHYHLSQHGV-----------------FSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI  138 (279)
T ss_pred             EecCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEE
Confidence            999999999999987654                 9999999999999999999999999999996             6


Q ss_pred             cCCCcceeeeccC-Cccccccccccccccc-cCCCCccccee
Q psy12228        216 IGFDLCILVFFHD-STLLKTTSTIASLILR-NQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~-~~~~s~~~Dv~  255 (258)
                      +|||++....... ....|+..|+|||.+. +..++.++||.
T Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  180 (279)
T cd05633         139 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWF  180 (279)
T ss_pred             ccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhH
Confidence            8999987543322 3457899999999986 45689999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.94  E-value=3.2e-26  Score=190.67  Aligned_cols=162  Identities=19%  Similarity=0.298  Sum_probs=134.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC------CcE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD------GPL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~------~~~  145 (258)
                      ..||+|+||.||+|...     .++..||+|++....  .....+..|+.++..+.+|+||+++++++...      ...
T Consensus        12 ~~lg~g~~g~vy~~~~~-----~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (272)
T cd06637          12 ELVGNGTYGQVYKGRHV-----KTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL   84 (272)
T ss_pred             HheeecCCeEEEEEEEc-----CCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence            37999999999999987     577899999997532  23456889999999986799999999998753      358


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +++|||+++|+|.+++.....               ..+++..+..++.|++.||.|||+++|+|+|||           
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~~---------------~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~  149 (272)
T cd06637          85 WLVMEFCGAGSVTDLIKNTKG---------------NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE  149 (272)
T ss_pred             EEEEEcCCCCcHHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCC
Confidence            999999999999999987432               248999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeecc---CCccccccccccccccc-----cCCCCccccee
Q psy12228        215 --FIGFDLCILVFFH---DSTLLKTTSTIASLILR-----NQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~s~~~Dv~  255 (258)
                        ++|||++......   .....|++.|+|||++.     +..++.++||.
T Consensus       150 ~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~  200 (272)
T cd06637         150 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLW  200 (272)
T ss_pred             EEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHH
Confidence              7899998864322   24567889999999986     34678899974

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.94  E-value=2.7e-26  Score=199.48  Aligned_cols=158  Identities=22%  Similarity=0.233  Sum_probs=132.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC------Cc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD------GP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~------~~  144 (258)
                      ..||+|+||.||++...     .++..||||++.... .......+.+|+.+++.+ +||||+++++++...      ..
T Consensus        30 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~~~~~  103 (364)
T cd07875          30 KPIGSGAQGIVCAAYDA-----ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQD  103 (364)
T ss_pred             EEeecCCCeEEEEEEEC-----CCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-CCCCccccceeecccccccccCe
Confidence            38999999999999986     567889999997532 334456788999999999 999999999988643      35


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +++||||+++ +|.+++..  .                 +++..+..++.|++.||.|||++||+|||||          
T Consensus       104 ~~lv~e~~~~-~l~~~~~~--~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  163 (364)
T cd07875         104 VYIVMELMDA-NLCQVIQM--E-----------------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  163 (364)
T ss_pred             EEEEEeCCCC-CHHHHHHh--c-----------------CCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC
Confidence            7999999976 88887753  2                 7889999999999999999999999999996          


Q ss_pred             ---ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++......  ....+|+.|+|||++.+..++.++||.
T Consensus       164 ~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw  209 (364)
T cd07875         164 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW  209 (364)
T ss_pred             cEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHH
Confidence               78999998643332  356789999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.94  E-value=4.9e-26  Score=190.79  Aligned_cols=180  Identities=29%  Similarity=0.431  Sum_probs=141.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||++.........++..+|+|.+... .......+.+|+++++.+ +|+||+++++++.+....+++|||
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   88 (280)
T cd05092          11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTVL-QHQHIVRFYGVCTEGRPLLMVFEY   88 (280)
T ss_pred             cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-CHHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCCceEEEEec
Confidence            389999999999998643223346678999998754 455567899999999999 999999999999998899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++........  ............+++..+..++.|++.||.|||+++++|||||             ++||
T Consensus        89 ~~~~~L~~~i~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~df  166 (280)
T cd05092          89 MRHGDLNRFLRSHGPDAK--ILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDF  166 (280)
T ss_pred             CCCCCHHHHHHhcCcchh--hhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCC
Confidence            999999999987542100  0000011112348999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......     ....+++.|+|||++.+..++.++||.
T Consensus       167 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  208 (280)
T cd05092         167 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIW  208 (280)
T ss_pred             CceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHH
Confidence            9987543322     223346789999999999999999984

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.94  E-value=7.8e-26  Score=186.73  Aligned_cols=163  Identities=19%  Similarity=0.273  Sum_probs=140.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||.+...     .++..+++|.+.... +......+.+|+.+++++ +|+||+++++++.+.+..+++||
T Consensus         6 ~~ig~g~~g~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~e   79 (256)
T cd08221           6 RVLGKGAFGEATLYRRT-----EDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEME   79 (256)
T ss_pred             eEecccCCceEEEEEEc-----CCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEEE
Confidence            48999999999999987     577889999986432 445567789999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....               ..+++.++..++.|++.||.|||+.+++|+|||             ++|
T Consensus        80 ~~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d  144 (256)
T cd08221          80 YANGGTLYDKIVRQKG---------------QLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGD  144 (256)
T ss_pred             ecCCCcHHHHHHhccc---------------cCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECc
Confidence            9999999999987532               238999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......   ....+++.|+|||++.+..++.++||.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~  185 (256)
T cd08221         145 FGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIW  185 (256)
T ss_pred             CcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhH
Confidence            99987654433   456789999999999988889999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=7.3e-27  Score=193.45  Aligned_cols=164  Identities=19%  Similarity=0.266  Sum_probs=131.5

Q ss_pred             eeeecCceEEEEEEEccccc--CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILK--QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|.......  ......+|+|.+... .....+.+.+|+.+++.+ .||||+++++++..+...++|||
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e   79 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-HRNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIMVQE   79 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcch-hHHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEEEEe
Confidence            68999999999998753111  112346888988653 334456788999999999 99999999999999889999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+++|+|.+++.....                .+++..++.++.||+.||.|||+++|+|||||                
T Consensus        80 ~~~~g~L~~~l~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~  143 (258)
T cd05078          80 YVKFGSLDTYLKKNKN----------------LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGN  143 (258)
T ss_pred             cCCCCcHHHHHhcCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCC
Confidence            9999999999986542                38999999999999999999999999999996                


Q ss_pred             -----ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                           ++|||++.... ......+++.|+|||++.+ ..++.++||.
T Consensus       144 ~~~~~l~d~g~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw  189 (258)
T cd05078         144 PPFIKLSDPGISITVL-PKEILLERIPWVPPECIENPQNLSLAADKW  189 (258)
T ss_pred             CceEEecccccccccC-CchhccccCCccCchhccCCCCCCchhhHH
Confidence                 35666654322 2234578889999999987 4578899974

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.94  E-value=6.2e-26  Score=188.26  Aligned_cols=166  Identities=16%  Similarity=0.231  Sum_probs=140.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCC--CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...||+|+||.||+|...     .++..||+|.++..  ......+.+.+|+++++++ +|+||+++++++.+++..+++
T Consensus         7 ~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv   80 (267)
T cd08224           7 EKKIGKGQFSVVYKAICL-----LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIV   80 (267)
T ss_pred             eeeeccCCceEEEEEEEc-----CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEE
Confidence            348999999999999987     57789999998642  2334467899999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|..++.....             ....+++.++..++.|++.||.|||+.|++|+|||             +
T Consensus        81 ~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l  147 (267)
T cd08224          81 LELADAGDLSRMIKHFKK-------------QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKL  147 (267)
T ss_pred             EecCCCCCHHHHHHHhcc-------------cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEE
Confidence            999999999999976432             12348999999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||++.......   ....+++.|+|||.+.+..++.++||.
T Consensus       148 ~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~  190 (267)
T cd08224         148 GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIW  190 (267)
T ss_pred             eccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHH
Confidence            8999987654332   345788899999999998999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.94  E-value=6.9e-26  Score=189.91  Aligned_cols=160  Identities=20%  Similarity=0.300  Sum_probs=136.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..+++|.+... .....+.+.+|+++++.+ +||||+++++++..++..++|+||+
T Consensus        12 ~lg~g~~g~v~~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v~e~~   84 (282)
T cd06643          12 ELGDGAFGKVYKAQNK-----ETGVLAAAKVIDTK-SEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILIEFC   84 (282)
T ss_pred             hcccCCCeEEEEEEEC-----CCCeEEEEEEeCCC-CHHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEEEEec
Confidence            6899999999999987     57788999999754 445567899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|..++....                ..+++..+..++.|++.||.|||+.+++|||||             ++|||
T Consensus        85 ~~~~l~~~~~~~~----------------~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg  148 (282)
T cd06643          85 AGGAVDAVMLELE----------------RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFG  148 (282)
T ss_pred             CCCcHHHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccc
Confidence            9999999887533                238999999999999999999999999999995             78999


Q ss_pred             cceeeecc---CCccccccccccccccc-----cCCCCccccee
Q psy12228        220 LCILVFFH---DSTLLKTTSTIASLILR-----NQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~s~~~Dv~  255 (258)
                      ++......   .....++..|+|||++.     +..++.++||.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~  192 (282)
T cd06643         149 VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW  192 (282)
T ss_pred             ccccccccccccccccccccccCHhhccccCCCCCCCCccchhh
Confidence            88754322   23567889999999984     45678899985

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.94  E-value=4.2e-26  Score=188.70  Aligned_cols=161  Identities=24%  Similarity=0.305  Sum_probs=132.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|.++.   ..++..+|+|+++... .....+.+.+|+.+++.+ +||||+++++++. .+..++||||
T Consensus         2 ~lg~G~~g~v~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~-~~~~~lv~e~   76 (257)
T cd05116           2 ELGSGNFGTVKKGMYKM---KKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIVRMIGICE-AESWMLVMEL   76 (257)
T ss_pred             cCCCcCCcceEEeEEec---CCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEc-CCCcEEEEec
Confidence            58999999999997642   1456889999997543 234457799999999999 9999999999886 4467899999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                 +++..+..++.|++.||.|||++||+|||||             ++||
T Consensus        77 ~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Df  139 (257)
T cd05116          77 AELGPLNKFLQKNKH-----------------VTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDF  139 (257)
T ss_pred             CCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCC
Confidence            999999999976544                 8999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......      ....++..|+|||++....++.++||.
T Consensus       140 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  182 (257)
T cd05116         140 GLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVW  182 (257)
T ss_pred             ccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHH
Confidence            9987643332      122335789999999888899999974

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.94  E-value=2.9e-26  Score=196.40  Aligned_cols=163  Identities=17%  Similarity=0.199  Sum_probs=131.1

Q ss_pred             eeeeec--CceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKC--AFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G--~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      .+||+|  +|+.||++..+     .++..||+|.++.... ....+.+.+|+.+++.+ +||||+++++++..++..++|
T Consensus         4 ~~ig~G~~~~~~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv   77 (327)
T cd08227           4 TVIGRGFEDLMTVNLARYK-----PTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVV   77 (327)
T ss_pred             hhccccccceEEEEEEeec-----ccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEE
Confidence            378999  78899999987     6889999999975433 33445677899999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcccc------------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFI------------  216 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlKi~------------  216 (258)
                      |||+++|+|.+++..+..               ..+++..++.++.|++.||+|||+++|+|||||+.            
T Consensus        78 ~e~~~~~~l~~~~~~~~~---------------~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l  142 (327)
T cd08227          78 TSFMAYGSAKDLICTHFM---------------DGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYL  142 (327)
T ss_pred             EeccCCCcHHHHHHhhcc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEE
Confidence            999999999999976532               23899999999999999999999999999999843            


Q ss_pred             -CCCcceeeecc----------CCcccccccccccccccc--CCCCccccee
Q psy12228        217 -GFDLCILVFFH----------DSTLLKTTSTIASLILRN--QKVSVLLDLI  255 (258)
Q Consensus       217 -dfgl~~~~~~~----------~~~~~gt~~y~aPE~~~~--~~~s~~~Dv~  255 (258)
                       ||+.+......          .....++..|+|||++.+  ..++.++||.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diw  194 (327)
T cd08227         143 SGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY  194 (327)
T ss_pred             cccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHH
Confidence             44432211100          122356678999999976  4689999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.94  E-value=7.7e-26  Score=194.36  Aligned_cols=182  Identities=46%  Similarity=0.626  Sum_probs=141.0

Q ss_pred             eeeecCceEEEEEEEcccccC--CceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||++...+....  .....||+|.++........+.+.+|+.+++++.+||||+++++++...+..++++|
T Consensus        19 ~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e   98 (334)
T cd05100          19 PLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVE   98 (334)
T ss_pred             eeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEe
Confidence            899999999999987532211  233579999998655566677899999999999779999999999999889999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++...... +..............+++..+..++.|++.||.|||++|++|||||             ++|
T Consensus        99 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~D  177 (334)
T cd05100          99 YASKGNLREYLRARRPP-GMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIAD  177 (334)
T ss_pred             cCCCCcHHHHHHhcCCc-ccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECC
Confidence            99999999999875421 0000000111123458899999999999999999999999999995             789


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....++..|+|||++.+..++.++||.
T Consensus       178 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  220 (334)
T cd05100         178 FGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW  220 (334)
T ss_pred             cccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhH
Confidence            99987543322     222334679999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=4.4e-26  Score=188.97  Aligned_cols=159  Identities=20%  Similarity=0.258  Sum_probs=138.6

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ||+|+||.||++...     .++..+|+|++....  .....+.+.+|+.+++.+ +||||+++++.+.++...++++||
T Consensus         1 lg~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   74 (262)
T cd05572           1 LGVGGFGRVELVKVK-----SKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEY   74 (262)
T ss_pred             CCCCCceEEEEEEEC-----CCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEec
Confidence            689999999999987     567899999997533  223456799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.+...                 +++..+..++.|++.||.|||+++++|+|||             ++||
T Consensus        75 ~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df  137 (262)
T cd05572          75 CLGGELWTILRDRGL-----------------FDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDF  137 (262)
T ss_pred             CCCCcHHHHHhhcCC-----------------CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence            999999999987654                 8999999999999999999999999999995             7899


Q ss_pred             Ccceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++......  .....+++.|+|||.+.+..++.++||.
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~  176 (262)
T cd05572         138 GFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYW  176 (262)
T ss_pred             CcccccCcccccccccCCcCccChhHhcCCCCCChhhhh
Confidence            998865443  2345788999999999988899999985

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.94  E-value=5.4e-26  Score=192.16  Aligned_cols=158  Identities=18%  Similarity=0.283  Sum_probs=136.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|.+..... ...+.+.+|+.+++.+ .|+||+++++.+..+...++||||+
T Consensus        27 ~lg~g~~~~v~~~~~~-----~~~~~v~ik~~~~~~~-~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          27 KIGQGASGTVYTAMDV-----ATGQEVAIRQMNLQQQ-PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             EecCCCCeEEEEEEEC-----CCCcEEEEEEEecCCc-chHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEeeccc
Confidence            7999999999999876     5678999999976433 3346788999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++....                  +++.++..++.|++.||.|||+++|+|||||             ++|||
T Consensus       100 ~~~~L~~~~~~~~------------------~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg  161 (296)
T cd06654         100 AGGSLTDVVTETC------------------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG  161 (296)
T ss_pred             CCCCHHHHHHhcC------------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccc
Confidence            9999999986532                  7899999999999999999999999999995             78999


Q ss_pred             cceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......   ....+++.|+|||.+.+..++.++||.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  200 (296)
T cd06654         162 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW  200 (296)
T ss_pred             cchhccccccccCcccCCccccCHHHHcCCCCCccchHH
Confidence            887543322   345788999999999998899999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.94  E-value=2.6e-26  Score=192.02  Aligned_cols=159  Identities=19%  Similarity=0.289  Sum_probs=137.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|.++........+.+.+|+.+++.+ +||||+++++++..++..++||||+
T Consensus        11 ~l~~g~~~~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642          11 RIGKGSFGEVYKGIDN-----RTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HhcCCCCeeEEEEEEc-----CCCeEEEEEEeccccchHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEEEEEcc
Confidence            6899999999999886     567899999997654455567899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++...                  .+++..+..++.|++.||.|||+++++|+|||             ++|||
T Consensus        85 ~~~~L~~~~~~~------------------~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg  146 (277)
T cd06642          85 GGGSALDLLKPG------------------PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFG  146 (277)
T ss_pred             CCCcHHHHhhcC------------------CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEcccc
Confidence            999999988642                  28899999999999999999999999999995             78999


Q ss_pred             cceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......   ....++..|+|||++.+..++.++||.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  185 (277)
T cd06642         147 VAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIW  185 (277)
T ss_pred             ccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHH
Confidence            887544322   345678899999999998999999974

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.94  E-value=8.6e-26  Score=189.54  Aligned_cols=167  Identities=17%  Similarity=0.238  Sum_probs=133.8

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEE-----cCC
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCT-----QDG  143 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~-----~~~  143 (258)
                      .....||+|+||.||++...     .++..+|+|+++...  .....+.+|+.+++.+.+||||+++++++.     .++
T Consensus        21 ~~~~~lg~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   93 (286)
T cd06638          21 EIIETIGKGTYGKVFKVLNK-----KNGSKAAVKILDPIH--DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGD   93 (286)
T ss_pred             eeeeeeccCCCcEEEEEEEC-----CCCceeEEEeecccc--chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCC
Confidence            33448999999999999987     567899999986532  223567889999999866999999999884     345


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      ..++||||+++|+|.+++.....             ....+++..+..++.|++.||.|||+++++|||||         
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~  160 (286)
T cd06638          94 QLWLVLELCNGGSVTDLVKGFLK-------------RGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTE  160 (286)
T ss_pred             eEEEEEeecCCCCHHHHHHHhhc-------------cCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCC
Confidence            68999999999999998875321             12348899999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeecc---CCcccccccccccccccc-----CCCCccccee
Q psy12228        215 ----FIGFDLCILVFFH---DSTLLKTTSTIASLILRN-----QKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~s~~~Dv~  255 (258)
                          ++|||++......   .....|++.|+|||++..     ..++.++||.
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~  213 (286)
T cd06638         161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVW  213 (286)
T ss_pred             CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhh
Confidence                7899998764332   234578899999999853     4578899985

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=6.4e-26  Score=187.54  Aligned_cols=162  Identities=29%  Similarity=0.355  Sum_probs=134.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||+|.+..  .+..+..+|+|.+.........+.+.+|+.+++.+ .|+||+++++++. .+..+++|||+
T Consensus         2 ~ig~G~~g~v~~~~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~~   77 (257)
T cd05060           2 ELGHGNFGSVVKGVYLM--KSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL-DHPCIVRLIGVCK-GEPLMLVMELA   77 (257)
T ss_pred             ccCccCceeEEEeEeec--cCCCcceEEEEecccccchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEc-CCceEEEEEeC
Confidence            68999999999998752  11234789999998654444567899999999999 9999999999876 45689999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                 +++..+..++.|++.||.|||+++++|+|||             ++|||
T Consensus        78 ~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~  140 (257)
T cd05060          78 PLGPLLKYLKKRRE-----------------IPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFG  140 (257)
T ss_pred             CCCcHHHHHHhCCC-----------------CCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEecccc
Confidence            99999999987654                 8999999999999999999999999999995             68999


Q ss_pred             cceeeeccCC------ccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHDS------TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~~------~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++.......      ...++..|+|||++.+..++.++||.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  182 (257)
T cd05060         141 MSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVW  182 (257)
T ss_pred             ccceeecCCcccccccCccccccccCHHHhcCCCCCccchHH
Confidence            9886544332      11224579999999999999999974

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.94  E-value=6.4e-26  Score=187.88  Aligned_cols=164  Identities=30%  Similarity=0.410  Sum_probs=133.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-CCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-~~~~~lv~e~  151 (258)
                      .||+|+||.||+|....  .......||+|.+.........+.+.+|+.+++.+ +||||+++++++.. ++..+++|||
T Consensus         2 ~lg~g~~g~v~~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           2 VIGKGHFGCVYHGTLID--SDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             cccccCCceEEEEEEec--CCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEec
Confidence            68999999999998752  11345789999986544555667899999999999 99999999998764 5568999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..+..++.|++.||.|||+++++|||||             ++||
T Consensus        79 ~~~~~L~~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~df  142 (262)
T cd05058          79 MKHGDLRNFIRSETH----------------NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADF  142 (262)
T ss_pred             CCCCCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCc
Confidence            999999999976432                26788889999999999999999999999995             7899


Q ss_pred             CcceeeeccC-------CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......       ....++..|+|||.+.+..++.++||.
T Consensus       143 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  186 (262)
T cd05058         143 GLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVW  186 (262)
T ss_pred             cccccccCCcceeecccccCcCCccccChhHhccCccchHHHHH
Confidence            9987543211       233456789999999988999999974

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.94  E-value=4.3e-26  Score=194.18  Aligned_cols=168  Identities=20%  Similarity=0.280  Sum_probs=131.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv~  149 (258)
                      .+||+|+||.||+|....   ..++..||+|.++....   ...+.+|+.+++.+ +||||+++++++..  +...+++|
T Consensus         7 ~~lG~G~~g~Vy~~~~~~---~~~~~~~a~k~~~~~~~---~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKD---GKDEKEYALKQIEGTGI---SMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLF   79 (317)
T ss_pred             eEeccCCCeeEEEEEecC---CCccceEEEEEecCCCC---cHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEE
Confidence            479999999999999752   13568899999975422   23577899999999 99999999999854  45789999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------  214 (258)
                      ||+.+ +|.+++.......        .......+++..+..++.||+.||.|||+++|+|||||               
T Consensus        80 e~~~~-~l~~~~~~~~~~~--------~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~  150 (317)
T cd07867          80 DYAEH-DLWHIIKFHRASK--------ANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR  150 (317)
T ss_pred             eeeCC-cHHHHHHhhhccc--------cCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCc
Confidence            99975 8988886543200        00112348999999999999999999999999999996               


Q ss_pred             --ccCCCcceeeeccC------Ccccccccccccccccc-CCCCccccee
Q psy12228        215 --FIGFDLCILVFFHD------STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                        ++|||+++......      ....+|+.|+|||++.+ ..++.++||.
T Consensus       151 ~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  200 (317)
T cd07867         151 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW  200 (317)
T ss_pred             EEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHH
Confidence              67999998643321      34578899999999876 4579999974

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.94  E-value=1.2e-25  Score=185.38  Aligned_cols=163  Identities=20%  Similarity=0.319  Sum_probs=140.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||++...     .++..+|+|.+.... .......+.+|+.+++.+ +||||+++++.+..++..++|||
T Consensus         6 ~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08220           6 RVVGRGAFGIVHLCRRK-----ADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVME   79 (256)
T ss_pred             EEecccCceEEEEEEEc-----CCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEEe
Confidence            48999999999999987     577899999996532 344567899999999999 99999999999998889999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------cc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------FI  216 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i~  216 (258)
                      |+++++|.+++.....               ..+++..+..++.|++.||.|||+++++|+|||              ++
T Consensus        80 ~~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~  144 (256)
T cd08220          80 YAPGGTLAEYIQKRCN---------------SLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIG  144 (256)
T ss_pred             cCCCCCHHHHHHHhcc---------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEc
Confidence            9999999999987542               348999999999999999999999999999995              67


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......  ....++..|+|||.+.+..++.++||.
T Consensus       145 d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  185 (256)
T cd08220         145 DFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIW  185 (256)
T ss_pred             cCCCceecCCCccccccccCCcccCchhccCCCCCcccchH
Confidence            999887654332  346788999999999998899999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=6.6e-26  Score=187.28  Aligned_cols=160  Identities=28%  Similarity=0.408  Sum_probs=136.9

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|...       ++.||+|.++....  ..+++.+|+.+++.+ +|+||+++++++.+....++|||
T Consensus        11 ~~~ig~g~~g~v~~~~~~-------~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e   80 (256)
T cd05039          11 GATIGKGEFGDVMLGDYR-------GQKVAVKCLKDDST--AAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYIVTE   80 (256)
T ss_pred             eeeeecCCCceEEEEEec-------CcEEEEEEeccchh--HHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEEEEE
Confidence            348999999999999875       47899999986533  467799999999999 99999999999998889999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....               ..+++..+..++.|++.||.|||+++++|+|||             ++|
T Consensus        81 ~~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d  145 (256)
T cd05039          81 YMAKGSLVDYLRSRGR---------------AVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSD  145 (256)
T ss_pred             ecCCCcHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcc
Confidence            9999999999987542               238999999999999999999999999999995             779


Q ss_pred             CCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++...........+..|+|||++.+..++.++||.
T Consensus       146 ~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~  183 (256)
T cd05039         146 FGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVW  183 (256)
T ss_pred             cccccccccccccCCCcccccCchhhcCCcCCcHHHHH
Confidence            99888664433344455679999999988899999974

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.94  E-value=4.6e-26  Score=192.88  Aligned_cols=160  Identities=19%  Similarity=0.273  Sum_probs=134.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|.++..........+.+|+.+++.+ +||||+++++++..++..++||||+
T Consensus        13 ~lg~g~~g~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv~e~~   86 (301)
T cd07873          13 KLGEGTYATVYKGRSK-----LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYL   86 (301)
T ss_pred             EeccCcCEEEEEEEEc-----CCCcEEEEEEEecccccCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEEEEecc
Confidence            7999999999999987     567899999997544444445678999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      + ++|.+++.....                .+++..+..++.||+.||.|||+++|+|+|||             ++|||
T Consensus        87 ~-~~l~~~l~~~~~----------------~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg  149 (301)
T cd07873          87 D-KDLKQYLDDCGN----------------SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFG  149 (301)
T ss_pred             c-cCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCc
Confidence            8 499999876542                38899999999999999999999999999995             78999


Q ss_pred             cceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        220 LCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ++.......   ....+++.|+|||++.+ ..++.++||.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~  189 (301)
T cd07873         150 LARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMW  189 (301)
T ss_pred             chhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHH
Confidence            987543322   24466889999999876 4578889974

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=5e-26  Score=190.38  Aligned_cols=161  Identities=16%  Similarity=0.173  Sum_probs=136.3

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ||+|+||.||++...     .++..||+|.+....  .......+.+|+++++.+ +||||+++++.+...+..++||||
T Consensus         1 lg~g~~g~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~   74 (277)
T cd05577           1 LGKGGFGEVCACQVK-----ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCLVMTL   74 (277)
T ss_pred             CCCCCceeEEEEEEc-----CCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEEEEec
Confidence            689999999999887     577899999996432  223345678899999999 899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....               ..+++..+..++.|++.||.|||+++++|+|||             ++||
T Consensus        75 ~~~~~L~~~l~~~~~---------------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~df  139 (277)
T cd05577          75 MNGGDLKYHIYNVGE---------------PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDL  139 (277)
T ss_pred             CCCCcHHHHHHHcCc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccC
Confidence            999999999987552               238999999999999999999999999999984             7899


Q ss_pred             Ccceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++......  .....++..|+|||++.+..++.++||.
T Consensus       140 g~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  178 (277)
T cd05577         140 GLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWF  178 (277)
T ss_pred             cchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhH
Confidence            988754322  1345678899999999988899999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.94  E-value=1.2e-25  Score=189.98  Aligned_cols=176  Identities=27%  Similarity=0.399  Sum_probs=140.1

Q ss_pred             eeeecCceEEEEEEEccc-----------ccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc
Q psy12228         73 VKIKCAFGKVICAEANGI-----------LKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ  141 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~-----------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~  141 (258)
                      .||+|+||.||++...+.           ....+...||+|+++..........+.+|+.+++.+ +|+||+++++++..
T Consensus        12 ~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~   90 (296)
T cd05095          12 KLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL-KDPNIIRLLAVCIT   90 (296)
T ss_pred             eccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec
Confidence            799999999999875421           112345689999998665556667899999999999 99999999999999


Q ss_pred             CCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------
Q psy12228        142 DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------  214 (258)
Q Consensus       142 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------  214 (258)
                      ++..+++|||+++|+|.+++........      ........+++..+..++.|++.||+|||+++++|||||       
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~  164 (296)
T cd05095          91 SDPLCMITEYMENGDLNQFLSRHEPQEA------AEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVG  164 (296)
T ss_pred             CCccEEEEEeCCCCcHHHHHHhcCcccc------cccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEc
Confidence            9999999999999999999987543110      011223458899999999999999999999999999996       


Q ss_pred             ------ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 ------FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ------i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                            ++|||+++......     ....++..|+|||+..+..++.++||.
T Consensus       165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Diw  216 (296)
T cd05095         165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVW  216 (296)
T ss_pred             CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhh
Confidence                  68999987543322     122335789999998888999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=2.9e-26  Score=193.48  Aligned_cols=158  Identities=20%  Similarity=0.279  Sum_probs=136.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...     .++..||||.+... .....+.+.+|+.+++.+ +|+||+++++.+..++..++||||+
T Consensus        29 ~lg~g~~g~v~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~lv~e~~  101 (292)
T cd06658          29 KIGEGSTGIVCIATEK-----HTGKQVAVKKMDLR-KQQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDELWVVMEFL  101 (292)
T ss_pred             cccCCCCeEEEEEEEC-----CCCCEEEEEEEecc-hHHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeEEEEEeCC
Confidence            6899999999999876     56789999998654 334456789999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++... .                 +++..+..++.||+.||.|||+++|+|||||             ++|||
T Consensus       102 ~~~~L~~~~~~~-~-----------------l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg  163 (292)
T cd06658         102 EGGALTDIVTHT-R-----------------MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFG  163 (292)
T ss_pred             CCCcHHHHHhcC-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCc
Confidence            999999988542 2                 8899999999999999999999999999995             78999


Q ss_pred             cceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......   ....++..|+|||++.+..++.++||.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  202 (292)
T cd06658         164 FCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIW  202 (292)
T ss_pred             chhhcccccccCceeecCccccCHHHHccCCCCchhhHH
Confidence            886432221   345788999999999988899999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=6.7e-26  Score=190.11  Aligned_cols=164  Identities=30%  Similarity=0.411  Sum_probs=134.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv~e  150 (258)
                      .||+|+||.||++.... ....++..||+|.++.. .....+.+.+|+.+++.+ +||||+++++++..  ...+++|||
T Consensus        11 ~lg~g~~g~v~~~~~~~-~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e   87 (284)
T cd05081          11 QLGKGNFGSVELCRYDP-LQDNTGEVVAVKKLQHS-TAEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLRLVME   87 (284)
T ss_pred             eccCCCCceEEEEEecC-CcCCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCCCceEEEEE
Confidence            79999999999998642 11246789999999764 445567899999999999 99999999998754  346899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..+..++.|++.||.|||++|++|||||             ++|
T Consensus        88 ~~~~~~L~~~l~~~~~----------------~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~d  151 (284)
T cd05081          88 YLPYGSLRDYLQKHRE----------------RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGD  151 (284)
T ss_pred             ecCCCCHHHHHHhcCc----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECC
Confidence            9999999999976532                28999999999999999999999999999996             789


Q ss_pred             CCcceeeeccCC------ccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHDS------TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~------~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.......      ...++..|+|||++.+..++.++||.
T Consensus       152 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  195 (284)
T cd05081         152 FGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVW  195 (284)
T ss_pred             CcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHH
Confidence            999886543321      12233569999999998999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.94  E-value=5.3e-26  Score=188.89  Aligned_cols=165  Identities=17%  Similarity=0.244  Sum_probs=139.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..+|||.+....  ......++.+|+.+++.+ +|+||+++++++..++..+++|
T Consensus         8 ~~ig~g~~g~v~~~~~~-----~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           8 KKIGRGQFSEVYRATCL-----LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             hhhcccCCeEEEEEeec-----CCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEEE
Confidence            37999999999999987     577899999886422  334456789999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++.....             ....+++..++.++.||+.||.|||+++++|+|||             ++
T Consensus        82 e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~  148 (267)
T cd08229          82 ELADAGDLSRMIKHFKK-------------QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLG  148 (267)
T ss_pred             EecCCCCHHHHHHHhhc-------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEC
Confidence            99999999999875322             12348999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......   ....++..|+|||++.+..++.++||.
T Consensus       149 dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~  190 (267)
T cd08229         149 DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIW  190 (267)
T ss_pred             cchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHH
Confidence            999887654332   245788999999999998999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=8.6e-26  Score=187.19  Aligned_cols=160  Identities=28%  Similarity=0.347  Sum_probs=134.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|++|.||+|...      .+..||+|.++...  ...+.+.+|+.+++++ +|+||+++++++...+..+++|||
T Consensus        12 ~~lg~g~~~~v~~~~~~------~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068          12 RKLGAGQFGEVWEGLWN------NTTPVAVKTLKPGT--MDPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             EEecccCCccEEEEEec------CCeEEEEEeeCCCc--ccHHHHHHHHHHHHHC-CCCCccceeEEEecCCCeeeeeec
Confidence            38999999999999875      34679999997532  2345689999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....               ..+++..+..++.|++.||.|||+++++|||||             ++||
T Consensus        83 ~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~df  147 (261)
T cd05068          83 MKYGSLLEYLQGGAG---------------RALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADF  147 (261)
T ss_pred             ccCCcHHHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCc
Confidence            999999999976542               248999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC-Cccc---cccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-STLL---KTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-~~~~---gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++....... ....   .+..|+|||++.+..++.++||.
T Consensus       148 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  188 (261)
T cd05068         148 GLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVW  188 (261)
T ss_pred             ceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHH
Confidence            9988654322 1122   23579999999999999999974

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.94  E-value=4.9e-26  Score=188.35  Aligned_cols=158  Identities=25%  Similarity=0.386  Sum_probs=132.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||.+.+.      .+..+|+|.++....  ..+.+.+|+.+++.+ +||||+++++++...+..+++|||+
T Consensus        11 ~lg~G~~~~vy~~~~~------~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd05113          11 ELGTGQFGVVKYGKWR------GQYDVAIKMIKEGSM--SEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIVTEYM   81 (256)
T ss_pred             EecCcccceEEEEEec------CCCcEEEEEcCCCcc--cHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEEEEcC
Confidence            7999999999999875      234699999875322  235689999999999 9999999999999888899999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..++.++.||+.||.|||+++++|+|||             ++|||
T Consensus        82 ~~~~l~~~i~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g  145 (256)
T cd05113          82 SNGCLLNYLREHGK----------------RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFG  145 (256)
T ss_pred             CCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCc
Confidence            99999999976432                38999999999999999999999999999995             78999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......    ....++..|+|||++.+..++.++||.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~  185 (256)
T cd05113         146 LSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVW  185 (256)
T ss_pred             cceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHH
Confidence            887543322    123345689999999988899999974

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.94  E-value=5.2e-26  Score=188.06  Aligned_cols=159  Identities=23%  Similarity=0.355  Sum_probs=132.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++.+.      .+..+|+|.+.....  ....+.+|+.+++.+ +||||+++++++...+..++||||
T Consensus        10 ~~lg~G~~~~v~~~~~~------~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05059          10 KELGSGQFGVVHLGKWR------GKIDVAIKMIREGAM--SEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVTEY   80 (256)
T ss_pred             hhhccCCCceEEEeEec------CCccEEEEEeccCCC--CHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEEEec
Confidence            37999999999999875      346799999865322  234688999999999 999999999999998999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....                .+++..+..++.|++.||.|||+++++|||||             ++||
T Consensus        81 ~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~df  144 (256)
T cd05059          81 MANGCLLNYLRERKG----------------KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDF  144 (256)
T ss_pred             CCCCCHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCc
Confidence            999999999986432                38999999999999999999999999999985             7899


Q ss_pred             CcceeeeccC-C---ccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-S---TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-~---~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++...... .   ...++..|+|||.+.+..++.++||.
T Consensus       145 g~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~  185 (256)
T cd05059         145 GLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVW  185 (256)
T ss_pred             ccceecccccccccCCCCCCccccCHHHhccCCCCchhhHH
Confidence            9987543322 1   12233579999999998999999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.94  E-value=7.5e-26  Score=186.95  Aligned_cols=164  Identities=30%  Similarity=0.358  Sum_probs=138.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|++|.||+|.+...  ......||+|.+.........+.+.+|+.+++++ +||||+++++.+.+ ...+++|||+
T Consensus         2 ~ig~g~~~~v~~~~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTS--GGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTELA   77 (257)
T ss_pred             cCCccCcccEEeeeEecC--CCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEec
Confidence            689999999999998621  1234579999998764445667899999999999 99999999999988 8899999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....               ..+++..++.++.|++.||.|||+++++|+|||             ++|||
T Consensus        78 ~~~~L~~~l~~~~~---------------~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg  142 (257)
T cd05040          78 PLGSLLDRLRKDAL---------------GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFG  142 (257)
T ss_pred             CCCcHHHHHHhccc---------------ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccc
Confidence            99999999987541               238999999999999999999999999999995             78999


Q ss_pred             cceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......      ....++..|+|||++.+..++.++||.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~  184 (257)
T cd05040         143 LMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVW  184 (257)
T ss_pred             ccccccccccceecccCCCCCceecCHHHhcccCcCchhhhH
Confidence            988654321      234567789999999999999999974

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.94  E-value=7.9e-26  Score=188.04  Aligned_cols=166  Identities=25%  Similarity=0.290  Sum_probs=137.5

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.....  ......+|+|.++........+.+..|+.+++.+ +|+||+++.+++.+.+..++|||
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~--~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   86 (268)
T cd05063          10 QKVIGAGEFGEVFRGILKMP--GRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPAMIITE   86 (268)
T ss_pred             eeEecCCCCccEEEEEEecC--CCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCcEEEEE
Confidence            34899999999999998621  1234589999997654555667899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....                .+++..+..++.|++.||.|||+++++|||||             ++|
T Consensus        87 ~~~~~~L~~~~~~~~~----------------~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~d  150 (268)
T cd05063          87 YMENGALDKYLRDHDG----------------EFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSD  150 (268)
T ss_pred             cCCCCCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECC
Confidence            9999999999976432                28999999999999999999999999999995             789


Q ss_pred             CCcceeeeccCC------ccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHDS------TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~------~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++........      ....+..|+|||++.+..++.++||.
T Consensus       151 fg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~  194 (268)
T cd05063         151 FGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVW  194 (268)
T ss_pred             CccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHH
Confidence            999876543221      11223579999999988899999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.94  E-value=9.3e-26  Score=190.80  Aligned_cols=159  Identities=19%  Similarity=0.274  Sum_probs=137.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++...     .++..||+|.+..... ...+.+.+|+.+++.+ +|+||+++++++..++..++||||
T Consensus        25 ~~lg~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          25 EKIGQGASGTVYTAIDI-----ATGQEVAIKQMNLQQQ-PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             eeeccCCCeEEEEEEEC-----CCCCEEEEEEEecCcc-chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEEEeecc
Confidence            37999999999999976     5778999999975422 3346688999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++....                  +++.++..++.|++.||.|||+.+++|||||             ++||
T Consensus        98 ~~~~~L~~~~~~~~------------------~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Df  159 (297)
T cd06656          98 LAGGSLTDVVTETC------------------MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDF  159 (297)
T ss_pred             cCCCCHHHHHHhCC------------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcC
Confidence            99999999986532                  7899999999999999999999999999995             7899


Q ss_pred             CcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......   ....+++.|+|||.+.+..++.++||.
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  199 (297)
T cd06656         160 GFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW  199 (297)
T ss_pred             ccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHH
Confidence            9987643332   345788999999999998899999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=3e-26  Score=193.81  Aligned_cols=158  Identities=22%  Similarity=0.295  Sum_probs=135.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...     .++..||+|++... .....+.+.+|+.++..+ +||||+++++++..++..++++||+
T Consensus        28 ~ig~g~~g~v~~~~~~-----~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~iv~e~~  100 (297)
T cd06659          28 KIGEGSTGIVCIAREK-----HSGRQVAVKMMDLR-KQQRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLMEFL  100 (297)
T ss_pred             hcCCCCceeEEEEEEc-----CCCCEEEEEEEEec-ccchHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEEEEecC
Confidence            7899999999999886     46789999999654 223346788999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|..++... .                 +++..+..++.|++.||.|||+++++|||||             ++|||
T Consensus       101 ~~~~L~~~~~~~-~-----------------~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg  162 (297)
T cd06659         101 QGGALTDIVSQT-R-----------------LNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFG  162 (297)
T ss_pred             CCCCHHHHHhhc-C-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeech
Confidence            999999987552 2                 8999999999999999999999999999995             78999


Q ss_pred             cceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++......   .....++..|+|||++.+..++.++||.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  201 (297)
T cd06659         163 FCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIW  201 (297)
T ss_pred             hHhhcccccccccceecCccccCHHHHccCCCCchhhHH
Confidence            88643322   2356788999999999998899999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.94  E-value=1e-25  Score=188.50  Aligned_cols=159  Identities=19%  Similarity=0.310  Sum_probs=138.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|+++..........+.+|+.+++.+ .|+||+++++++.+++..++||||+
T Consensus        11 ~lg~g~~~~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640          11 RIGKGSFGEVFKGIDN-----RTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hcccCCCeEEEEEEEc-----cCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEecC
Confidence            7999999999999987     567899999997654555667899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++... .                 +++..+..++.|++.||+|||+++++|+||+             ++|||
T Consensus        85 ~~~~L~~~i~~~-~-----------------l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg  146 (277)
T cd06640          85 GGGSALDLLRAG-P-----------------FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFG  146 (277)
T ss_pred             CCCcHHHHHhcC-C-----------------CCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccc
Confidence            999999998653 2                 8899999999999999999999999999995             78999


Q ss_pred             cceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......   ....++..|+|||++.+..++.++||.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~  185 (277)
T cd06640         147 VAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIW  185 (277)
T ss_pred             cceeccCCccccccccCcccccCHhHhccCCCccHHHHH
Confidence            987654322   344678899999999988899999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>PTZ00284 protein kinase; Provisional

Probab=99.94  E-value=7e-26  Score=203.09  Aligned_cols=160  Identities=14%  Similarity=0.210  Sum_probs=129.1

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC------CcccceeeeEEcC-
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH------INIINLLGVCTQD-  142 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h------~nIv~l~~~~~~~-  142 (258)
                      ...+||+|+||.||+|...     .++..||||+++..  ......+..|+.++..+ +|      .+++.+++++... 
T Consensus       133 i~~~lG~G~fg~V~~a~~~-----~~~~~vAvK~i~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~i~~~~~~~~  204 (467)
T PTZ00284        133 ILSLLGEGTFGKVVEAWDR-----KRKEYCAVKIVRNV--PKYTRDAKIEIQFMEKV-RQADPADRFPLMKIQRYFQNET  204 (467)
T ss_pred             EEEEEEeccCEEEEEEEEc-----CCCeEEEEEEEecc--hhhHHHHHHHHHHHHHH-hhcCcccCcceeeeEEEEEcCC
Confidence            3457999999999999987     56789999999753  22234456677777776 54      4588888888764 


Q ss_pred             CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------
Q psy12228        143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------  214 (258)
Q Consensus       143 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------  214 (258)
                      +.+++|||++ +++|.+++.+.+.                 +++..+..|+.||+.||.|||+ .||||||||       
T Consensus       205 ~~~~iv~~~~-g~~l~~~l~~~~~-----------------l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~  266 (467)
T PTZ00284        205 GHMCIVMPKY-GPCLLDWIMKHGP-----------------FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILME  266 (467)
T ss_pred             ceEEEEEecc-CCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEe
Confidence            4689999988 5699999987655                 9999999999999999999998 599999975       


Q ss_pred             ----------------------ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 ----------------------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----------------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                            |+|||++..........+||+.|+|||++.+..|+.++||.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw  329 (467)
T PTZ00284        267 TSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMW  329 (467)
T ss_pred             cCCcccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHH
Confidence                                  56888776544444577899999999999999999999974

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.1e-25  Score=187.87  Aligned_cols=160  Identities=19%  Similarity=0.261  Sum_probs=140.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||.|+||.||+|...     .++..||+|.+...........+.+|+.+++.+ +|+||+++++++.++...++|+||
T Consensus         7 ~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           7 ECIGKGSFGEVYKAIDK-----RTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC-RSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             hhhcCCCCeEEEEEEEC-----CCCeEEEEEEeeccccchHHHHHHHHHHHHHHc-CCCCeeeeeEEEEECCeEEEEEEe
Confidence            37899999999999987     577899999997654455567789999999999 899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++... .                 +++..+..++.|++.||.|||+++++|+||+             ++||
T Consensus        81 ~~~~~L~~~~~~~-~-----------------~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~  142 (274)
T cd06609          81 CGGGSCLDLLKPG-K-----------------LDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADF  142 (274)
T ss_pred             eCCCcHHHHHhhc-C-----------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccc
Confidence            9999999998764 2                 8999999999999999999999999999995             7899


Q ss_pred             Ccceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++.....   .....+++.|+|||++.+..++.++||.
T Consensus       143 g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~  182 (274)
T cd06609         143 GVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIW  182 (274)
T ss_pred             ccceeecccccccccccCCccccChhhhccCCCCchhhHH
Confidence            999876543   2456788899999999998899999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.94  E-value=1e-25  Score=186.23  Aligned_cols=158  Identities=28%  Similarity=0.396  Sum_probs=133.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEE-cCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCT-QDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~-~~~~~~lv~e  150 (258)
                      ..||+|+||.||++...       +..||+|.++..   ...+.+.+|+.+++.+ +|+|++++++++. .++..+++||
T Consensus        12 ~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv~e   80 (256)
T cd05082          12 QTIGKGEFGDVMLGDYR-------GNKVAVKCIKND---ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTE   80 (256)
T ss_pred             eeecccCCCeEEEEEEc-------CCcEEEEEeCCC---chHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceEEEEE
Confidence            38999999999999765       477999998753   2345789999999999 9999999999765 4557899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....               ..+++..+..++.|++.||.|||++|++|||||             ++|
T Consensus        81 ~~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~d  145 (256)
T cd05082          81 YMAKGSLVDYLRSRGR---------------SVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSD  145 (256)
T ss_pred             CCCCCcHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecC
Confidence            9999999999986543               238899999999999999999999999999995             789


Q ss_pred             CCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++...........+..|+|||++.+..++.++||.
T Consensus       146 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  183 (256)
T cd05082         146 FGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW  183 (256)
T ss_pred             CccceeccccCCCCccceeecCHHHHccCCCCchhhhH
Confidence            99988655444455556789999999999999999974

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.94  E-value=1.4e-25  Score=187.58  Aligned_cols=160  Identities=19%  Similarity=0.297  Sum_probs=138.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|.+...........+.+|+.+++.+ +||||+++++++..+...++||||
T Consensus        10 ~~ig~G~~~~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~   83 (277)
T cd06641          10 EKIGKGSFGEVFKGIDN-----RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEY   83 (277)
T ss_pred             eeEeecCCeEEEEEEEC-----CCCcEEEEEEeccccchHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEEEEEe
Confidence            37999999999999876     567899999987554455567799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++...                  .+++..+..++.|++.||.|||+++++|+|||             ++||
T Consensus        84 ~~~~~l~~~i~~~------------------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~df  145 (277)
T cd06641          84 LGGGSALDLLEPG------------------PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADF  145 (277)
T ss_pred             CCCCcHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeec
Confidence            9999999998643                  28999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......   ....++..|+|||.+.+..++.++||.
T Consensus       146 g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~  185 (277)
T cd06641         146 GVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW  185 (277)
T ss_pred             ccceecccchhhhccccCCccccChhhhccCCCCchhhHH
Confidence            9887544322   345788899999999888889999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.4e-25  Score=186.64  Aligned_cols=170  Identities=26%  Similarity=0.354  Sum_probs=136.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc------
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP------  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~------  144 (258)
                      ..||+|+||.||.|....  .......||+|.++... .......+.+|+..++.+ +||||+++++++.....      
T Consensus         5 ~~lg~G~~g~v~~~~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           5 KILGEGEFGSVMEGQLSQ--DDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             cccCcCCCceEEEEEEec--CCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCccccCcc
Confidence            378999999999998752  11245789999997543 344567899999999999 99999999999876544      


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++++||+++|+|..++......           .....+++..+..++.|++.||.|||+++++|||||          
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~-----------~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~  150 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLG-----------GLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDM  150 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhcc-----------CCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCC
Confidence            79999999999999999765320           112358999999999999999999999999999996          


Q ss_pred             ---ccCCCcceeeeccCC-----ccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHDS-----TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++.......     ....+..|+|||.+.+..+++++||.
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~  199 (273)
T cd05035         151 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVW  199 (273)
T ss_pred             eEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchH
Confidence               789999986544321     22345689999999998999999984

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.1e-25  Score=188.44  Aligned_cols=165  Identities=22%  Similarity=0.332  Sum_probs=136.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...... ......+|+|.+...........+.+|+.+++.+ +||||+++++++.. ...+++|||
T Consensus        13 ~~ig~g~~g~v~~~~~~~~~-~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~   89 (279)
T cd05057          13 KVLGSGAFGTVYKGVWIPEG-EKVKIPVAIKVLREETSPKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQVQLITQL   89 (279)
T ss_pred             ceecCCCCccEEEEEEecCC-CCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-CceEEEEec
Confidence            38999999999999976211 1123579999997665555667899999999999 99999999999987 688999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..+..++.|++.||+|||+++++|||||             ++||
T Consensus        90 ~~~g~L~~~l~~~~~----------------~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~df  153 (279)
T cd05057          90 MPLGCLLDYVRNHKD----------------NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDF  153 (279)
T ss_pred             CCCCcHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCC
Confidence            999999999987542                28999999999999999999999999999995             7899


Q ss_pred             CcceeeeccCC-----ccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHDS-----TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++.......     ...++..|+|||.+....++.++||.
T Consensus       154 g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  195 (279)
T cd05057         154 GLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVW  195 (279)
T ss_pred             cccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHH
Confidence            99876543321     12234679999999888999999974

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.94  E-value=1.1e-25  Score=187.41  Aligned_cols=169  Identities=29%  Similarity=0.367  Sum_probs=133.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC------Cc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD------GP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~------~~  144 (258)
                      .+||+|+||.||+|.....   .....||+|.++... .....+.+.+|+.+++.+ +|+||+++++++...      ..
T Consensus         5 ~~ig~G~~g~V~~~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           5 KTLGEGEFGSVMEGQLNQD---DSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             cccCcccCceEEEeEEccC---CCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCCCC
Confidence            4799999999999998621   122479999987542 445567899999999999 999999999987532      24


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .+++|||+++|+|.+++......           .....+++..+..++.|++.||.|||+++|+|||||          
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~  149 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLG-----------DCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENM  149 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhccc-----------CCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCC
Confidence            68999999999999998643310           012348999999999999999999999999999996          


Q ss_pred             ---ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++......     ....+++.|+|||++.+..++.++||.
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~  198 (272)
T cd05075         150 NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVW  198 (272)
T ss_pred             CEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHH
Confidence               78999988654332     223456789999999998999999974

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.94  E-value=1.5e-25  Score=188.82  Aligned_cols=161  Identities=23%  Similarity=0.333  Sum_probs=136.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..+|+|.+... .....+.+.+|+.+++.+ +|+||+++++.+..++..++||||
T Consensus        18 ~~lg~g~~g~vy~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          18 GELGDGAFGKVYKAKNK-----ETGALAAAKVIETK-SEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             heecCCCCeEEEEEEEC-----CCCceEEEEEeccC-CHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEEEEEec
Confidence            37999999999999987     57789999999764 455567899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|..++.....                .+++..+..++.|++.||.|||+++++|||||             ++||
T Consensus        91 ~~~~~l~~~~~~~~~----------------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~df  154 (292)
T cd06644          91 CPGGAVDAIMLELDR----------------GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADF  154 (292)
T ss_pred             CCCCcHHHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccC
Confidence            999999988865432                28999999999999999999999999999995             7899


Q ss_pred             Ccceeeecc---CCccccccccccccccc-----cCCCCccccee
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILR-----NQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~s~~~Dv~  255 (258)
                      |++......   .....+++.|+|||++.     ...++.++||.
T Consensus       155 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~  199 (292)
T cd06644         155 GVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW  199 (292)
T ss_pred             ccceeccccccccceecCCccccCceeeccccccCCCCCchhhhH
Confidence            988753222   13556889999999985     34567889974

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=8.1e-26  Score=189.81  Aligned_cols=163  Identities=17%  Similarity=0.261  Sum_probs=136.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...     .++..||+|.++..........+.+|+.+++.+ +|+||+++++++..++..++||||+
T Consensus         8 ~ig~g~~g~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           8 ELGKGNYGSVYKVLHR-----PTGVTMAMKEIRLELDESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhcccCCeEEEEEEEc-----CCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEEEeec
Confidence            7899999999999987     577899999997654555567899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------------ccCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------------FIGF  218 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------------i~df  218 (258)
                      ++++|..++.....              ...+++..+..++.|++.||.|||+ .+|+|+|||             ++||
T Consensus        82 ~~~~l~~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~df  147 (286)
T cd06622          82 DAGSLDKLYAGGVA--------------TEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDF  147 (286)
T ss_pred             CCCCHHHHHHhccc--------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeec
Confidence            99999999876421              1238999999999999999999997 599999985             7899


Q ss_pred             Ccceeeecc-CCccccccccccccccccC------CCCccccee
Q psy12228        219 DLCILVFFH-DSTLLKTTSTIASLILRNQ------KVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~-~~~~~gt~~y~aPE~~~~~------~~s~~~Dv~  255 (258)
                      |++...... .....+++.|+|||++.+.      .++.++||-
T Consensus       148 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Diw  191 (286)
T cd06622         148 GVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVW  191 (286)
T ss_pred             CCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchH
Confidence            998754332 2455688899999998654      347888874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0666|consensus

Probab=99.94  E-value=1.9e-27  Score=192.95  Aligned_cols=167  Identities=22%  Similarity=0.310  Sum_probs=137.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH-HHHHHHHHHHHHHHhcCCCcccceeeeEEc-CCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA-EMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-~~~~~lv~e  150 (258)
                      .||+|+||.||++...+... .....+|+|.++...+.. ......+|+..++.+ +||||+.+..++.. +..+++++|
T Consensus        31 ~Ig~GTYG~VykA~~~~~n~-kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl-~h~nvi~Lv~Vfl~~d~~v~l~fd  108 (438)
T KOG0666|consen   31 KIGRGTYGKVYKAVRKNTND-KRTKEYAIKKFKGEKDGTGISMSACREIALLREL-KHPNVISLVKVFLSHDKKVWLLFD  108 (438)
T ss_pred             eecccccceeeEeeeccCCc-ccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh-cCCcchhHHHHHhccCceEEEEeh
Confidence            69999999999997653211 123589999998653322 234578999999999 99999999999987 778999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |.+. +|.+.|+.++..            ..+.++...+..|+.||+.|+.|||++=|+|||||                
T Consensus       109 YAEh-DL~~II~fHr~~------------~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~V  175 (438)
T KOG0666|consen  109 YAEH-DLWHIIKFHRAS------------KAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRV  175 (438)
T ss_pred             hhhh-hHHHHHHHhccc------------hhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCee
Confidence            9998 999999987752            23569999999999999999999999999999995                


Q ss_pred             -ccCCCcceeeecc------CCcccccccccccccccc-CCCCcccce
Q psy12228        215 -FIGFDLCILVFFH------DSTLLKTTSTIASLILRN-QKVSVLLDL  254 (258)
Q Consensus       215 -i~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~s~~~Dv  254 (258)
                       |+|+|+++.+...      ...++-|.+|.|||.+.| .-|+.++||
T Consensus       176 KIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDv  223 (438)
T KOG0666|consen  176 KIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDV  223 (438)
T ss_pred             EeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhh
Confidence             7899999976443      246778999999999988 567999996

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=9.9e-26  Score=188.70  Aligned_cols=160  Identities=21%  Similarity=0.294  Sum_probs=136.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...     .++..+|+|+++.. .....+.+.+|+.+++.+ +||||+++++.+..+...++||||+
T Consensus        12 ~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd06611          12 ELGDGAFGKVYKAQHK-----ETGLFAAAKIIQIE-SEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWILIEFC   84 (280)
T ss_pred             HhcCCCCceEEEEEEc-----CCCcEEEEEEEeeC-CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEeecc
Confidence            6899999999999987     46789999999754 445567899999999999 8999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++.....                .+++..++.++.|++.||.|||+++|+|+|||             ++|||
T Consensus        85 ~~~~L~~~~~~~~~----------------~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g  148 (280)
T cd06611          85 DGGALDSIMLELER----------------GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFG  148 (280)
T ss_pred             CCCcHHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCc
Confidence            99999999987542                38999999999999999999999999999995             78999


Q ss_pred             cceeeecc---CCccccccccccccccc-----cCCCCccccee
Q psy12228        220 LCILVFFH---DSTLLKTTSTIASLILR-----NQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~s~~~Dv~  255 (258)
                      ++......   .....+++.|+|||++.     +..++.++||.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~  192 (280)
T cd06611         149 VSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIW  192 (280)
T ss_pred             cchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHH
Confidence            87653322   23457889999999985     34567889974

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.94  E-value=9.6e-26  Score=187.21  Aligned_cols=160  Identities=25%  Similarity=0.430  Sum_probs=135.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-----hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-----DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ..||+|+||.||+|...      ++..+|+|.++....     ......+.+|+++++.+ +|+||+++++++.+.+..+
T Consensus         6 ~~ig~g~~~~v~~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   78 (265)
T cd06631           6 EVLGKGAYGTVYCGLTN------QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTIS   78 (265)
T ss_pred             ceEeccCCeEEEEEEEc------CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEE
Confidence            37999999999999753      568899999864321     22346688999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +++||+++++|.+++.+...                 +++..+..++.|++.||+|||+.+++|+|||            
T Consensus        79 lv~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~  141 (265)
T cd06631          79 IFMEFVPGGSISSILNRFGP-----------------LPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGII  141 (265)
T ss_pred             EEEecCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeE
Confidence            99999999999999987654                 8999999999999999999999999999995            


Q ss_pred             -ccCCCcceeeecc---------CCccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFH---------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||++......         .....++..|+|||++.+..++.++||.
T Consensus       142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~  192 (265)
T cd06631         142 KLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIW  192 (265)
T ss_pred             EeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHH
Confidence             7899988753211         1245688999999999998999999974

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=1.5e-25  Score=186.14  Aligned_cols=162  Identities=19%  Similarity=0.291  Sum_probs=137.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh--------HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD--------AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~  143 (258)
                      ..||+|+||.||+|...     .++..+|+|.+......        ...+.+.+|+.+++.+ +||||+++++++...+
T Consensus         6 ~~ig~g~~~~v~~a~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   79 (267)
T cd06628           6 ALIGSGSFGSVYLGMNA-----SSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDAD   79 (267)
T ss_pred             ceeecCCCeEEEEEEec-----CCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCC
Confidence            38999999999999976     46788999988643211        1235688999999999 9999999999999999


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      ..+++|||+++++|.+++.....                 +++..+..++.|++.||.|||+++++|||||         
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~  142 (267)
T cd06628          80 HLNIFLEYVPGGSVAALLNNYGA-----------------FEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNK  142 (267)
T ss_pred             ccEEEEEecCCCCHHHHHHhccC-----------------ccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCC
Confidence            99999999999999999987654                 8999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeeccC---------CccccccccccccccccCCCCcccceeE
Q psy12228        215 ----FIGFDLCILVFFHD---------STLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~---------~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                          ++|||+++......         ....++..|+|||++.+..++.++||..
T Consensus       143 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~s  197 (267)
T cd06628         143 GGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWS  197 (267)
T ss_pred             CCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHH
Confidence                78999987654211         1345788999999999988999999853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.94  E-value=1.9e-25  Score=184.32  Aligned_cols=161  Identities=20%  Similarity=0.312  Sum_probs=138.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC----ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH----SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ..||+|+||.||+|...     .++..|++|.+....    .....+.+.+|+.+++.+ +|+||+++++++..+...++
T Consensus         6 ~~ig~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l   79 (258)
T cd06632           6 ELLGSGSFGSVYEGLNL-----DDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYI   79 (258)
T ss_pred             ceeeecCCceEEEEEEc-----CCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEE
Confidence            47999999999999986     567899999986432    233456799999999999 99999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ++||+++++|.+++.....                 +++..+..++.|++.||.|||+.+++|+|||             
T Consensus        80 v~e~~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~k  142 (258)
T cd06632          80 FLELVPGGSLAKLLKKYGS-----------------FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVK  142 (258)
T ss_pred             EEEecCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence            9999999999999987654                 8999999999999999999999999999995             


Q ss_pred             ccCCCcceeeeccC--CccccccccccccccccCC-CCccccee
Q psy12228        215 FIGFDLCILVFFHD--STLLKTTSTIASLILRNQK-VSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~-~s~~~Dv~  255 (258)
                      ++|||++.......  ....++..|+|||.+.... ++.++|+.
T Consensus       143 l~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~  186 (258)
T cd06632         143 LADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIW  186 (258)
T ss_pred             EccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhH
Confidence            78999887644332  4567889999999998766 89999974

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=1.4e-25  Score=210.76  Aligned_cols=164  Identities=17%  Similarity=0.228  Sum_probs=134.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv~  149 (258)
                      .||+|+||.||++...     .++..||+|++.... .......+..|+.+++.+ +|||||+++++|.+.  ..++|||
T Consensus        20 kLG~GgFGtVYLAkdk-----~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f~de~~~~lyIVM   93 (1021)
T PTZ00266         20 KIGNGRFGEVFLVKHK-----RTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-KHKNIVRYIDRFLNKANQKLYILM   93 (1021)
T ss_pred             EEecCCCeEEEEEEEC-----CCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEecCCCEEEEEE
Confidence            8999999999999987     577899999997432 444567899999999999 999999999988653  4689999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-------CccccCcc--------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-------KVGNDAVR--------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-------~iiH~DlK--------  214 (258)
                      ||+++|+|.++|.....             ....+++..++.|+.||+.||.|||+.       +|||||||        
T Consensus        94 EY~~gGSL~~lL~k~~~-------------~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266         94 EFCDAGDLSRNIQKCYK-------------MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             eCCCCCcHHHHHHHHhh-------------ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence            99999999999986432             012389999999999999999999984       59999995        


Q ss_pred             ----------------------ccCCCcceeeeccC--Ccccccccccccccccc--CCCCccccee
Q psy12228        215 ----------------------FIGFDLCILVFFHD--STLLKTTSTIASLILRN--QKVSVLLDLI  255 (258)
Q Consensus       215 ----------------------i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~--~~~s~~~Dv~  255 (258)
                                            |+|||++.......  ....||+.|+|||++.+  ..++.++||.
T Consensus       161 ~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVW  227 (1021)
T PTZ00266        161 GIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMW  227 (1021)
T ss_pred             CccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHH
Confidence                                  46888887543322  35679999999999864  4589999984

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.94  E-value=1.9e-25  Score=185.66  Aligned_cols=162  Identities=20%  Similarity=0.265  Sum_probs=136.0

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC----ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--Cc
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH----SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GP  144 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~  144 (258)
                      ...||+|+||.||++...     .++..||+|.+....    .......+.+|+.+++.+ +||||+++++++.+.  ..
T Consensus         7 ~~~lg~g~~g~vy~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   80 (266)
T cd06651           7 GKLLGQGAFGRVYLCYDV-----DTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKT   80 (266)
T ss_pred             cceecCCCCEEEEEEEEc-----CCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCE
Confidence            348999999999999987     567899999986432    223456788999999999 999999999998753  56


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++++||+++++|.+++.....                 +++.....++.|++.||.|||+++|+|||||          
T Consensus        81 ~~l~~e~~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~  143 (266)
T cd06651          81 LTIFMEYMPGGSVKDQLKAYGA-----------------LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG  143 (266)
T ss_pred             EEEEEeCCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence            8899999999999999987554                 8899999999999999999999999999985          


Q ss_pred             ---ccCCCcceeeecc------CCccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFH------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++.....      .....++..|+|||++.+..++.++||.
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  193 (266)
T cd06651         144 NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVW  193 (266)
T ss_pred             CEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhH
Confidence               7899998754321      1235678899999999998899999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.94  E-value=5.9e-26  Score=188.00  Aligned_cols=161  Identities=27%  Similarity=0.335  Sum_probs=136.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||+|...     . +..+|+|++... .......+.+|+.+++.+ +|+||+++++++.+.+..+++|||
T Consensus        12 ~~ig~g~~~~vy~~~~~-----~-~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148          12 RKLGSGYFGEVWEGLWK-----N-RVRVAIKILKSD-DLLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             hhhccCCCccEEEeEec-----C-CCcEEEEecccc-chhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEEEee
Confidence            37999999999999986     3 688999999764 333456789999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....               ..+++..+..++.|++.||.|||+++++|+|||             ++||
T Consensus        84 ~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~  148 (261)
T cd05148          84 MEKGSLLAFLRSPEG---------------QVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADF  148 (261)
T ss_pred             cccCCHHHHHhcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccc
Confidence            999999999986542               348999999999999999999999999999995             6799


Q ss_pred             CcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......   ....++..|+|||++.+..++.++||.
T Consensus       149 g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Diw  188 (261)
T cd05148         149 GLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVW  188 (261)
T ss_pred             cchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHH
Confidence            9887543322   223445689999999988999999973

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=1.1e-25  Score=189.48  Aligned_cols=161  Identities=18%  Similarity=0.252  Sum_probs=133.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|++|.||+|...     .++..||+|.+...........+.+|+++++.+ +|+||+++++++.+++..++||||
T Consensus        11 ~~lg~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844          11 DKLGEGSYATVYKGRSK-----LTGQLVALKEIRLEHEEGAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             EEEeecCCeEEEEEEEc-----CCCcEEEEEEEecccccCCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEEEEec
Confidence            38999999999999986     567899999997543333334577899999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++ +|.+++.....                .+++..+..++.|++.||.|||+++|+|||||             ++||
T Consensus        85 ~~~-~L~~~~~~~~~----------------~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~df  147 (291)
T cd07844          85 LDT-DLKQYMDDCGG----------------GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADF  147 (291)
T ss_pred             CCC-CHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECcc
Confidence            985 99999876542                38999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      |+++......   ....++..|+|||++.+ ..++.++||.
T Consensus       148 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~  188 (291)
T cd07844         148 GLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMW  188 (291)
T ss_pred             ccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHH
Confidence            9987543222   23346788999999875 4578999974

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG1025|consensus

Probab=99.94  E-value=3.7e-27  Score=211.37  Aligned_cols=167  Identities=27%  Similarity=0.401  Sum_probs=142.8

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ....+||+|+||.||+|.|... .+.-..+||+|++......+...++++|+-+|.++ +|||+++++|+|.... +.||
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pe-ge~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~qlv  775 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPE-GENVKIPVAIKVLIEFTSPKASIELLDEALRMASL-DHPNLLRLLGVCMLST-LQLV  775 (1177)
T ss_pred             hhhceeccccceeEEeeeEecC-CceecceeEEEEeeccCCchhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-HHHH
Confidence            4455899999999999999632 22345789999998766666678899999999999 9999999999998765 7899


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cc
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RF  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki  215 (258)
                      ++|++.|+|.+|++.++.                .+-...++.|..|||+||.|||.++++||||             |+
T Consensus       776 tq~mP~G~LlDyvr~hr~----------------~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvki  839 (1177)
T KOG1025|consen  776 TQLMPLGCLLDYVREHRD----------------NIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKI  839 (1177)
T ss_pred             HHhcccchHHHHHHHhhc----------------cccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEE
Confidence            999999999999998775                3888999999999999999999999999999             79


Q ss_pred             cCCCcceeeeccCCc---c--ccccccccccccccCCCCcccce
Q psy12228        216 IGFDLCILVFFHDST---L--LKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       216 ~dfgl~~~~~~~~~~---~--~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      .|||+++........   .  .-.+.|||-|.+....|+.++||
T Consensus       840 tdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDV  883 (1177)
T KOG1025|consen  840 TDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDV  883 (1177)
T ss_pred             EecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhh
Confidence            999999976554421   1  22267999999999999999997

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=2.2e-25  Score=187.49  Aligned_cols=164  Identities=20%  Similarity=0.233  Sum_probs=137.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv~e  150 (258)
                      .||.|++|.||++...     .++..+|+|.+...........+.+|+++++.+ +||||+++++++.+.  +.+++|||
T Consensus         8 ~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           8 RLGEGAGGSVTKCRLK-----NTGMIFALKTITTDPNPDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             EeccCCceEEEEEEEC-----CCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEEEEEE
Confidence            7999999999999987     567999999997654445567799999999999 999999999998653  36899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....             ....+++..+..++.|++.||.|||+.+++|+||+             ++|
T Consensus        82 ~~~~~~L~~~l~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~d  148 (287)
T cd06621          82 YCEGGSLDSIYKKVKK-------------RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCD  148 (287)
T ss_pred             ecCCCCHHHHHHHHHh-------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEee
Confidence            9999999998765322             12348899999999999999999999999999995             789


Q ss_pred             CCcceeeeccC-CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++....... ....++..|+|||.+.+..++.++||.
T Consensus       149 fg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~  187 (287)
T cd06621         149 FGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVW  187 (287)
T ss_pred             ccccccccccccccccCCccccCHHHhcCCCCCchhhHH
Confidence            99987544332 345678899999999998999999974

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.94  E-value=1.9e-25  Score=188.91  Aligned_cols=158  Identities=19%  Similarity=0.303  Sum_probs=136.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||.|+||.||+|...     .++..||+|.+... .....+.+.+|+.+++.+ +||||+++++++...+..++|+||+
T Consensus        26 ~lg~g~~g~vy~~~~~-----~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          26 KIGQGASGTVFTAIDV-----ATGQEVAIKQINLQ-KQPKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             EEecCCCeEEEEEEEc-----CCCcEEEEEEEecc-cCchHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEEEEEEec
Confidence            7999999999999876     57789999999754 223356788999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|..++....                  +++.++..++.|++.||.|||++|++|+|||             ++|||
T Consensus        99 ~~~~L~~~~~~~~------------------l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg  160 (296)
T cd06655          99 AGGSLTDVVTETC------------------MDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFG  160 (296)
T ss_pred             CCCcHHHHHHhcC------------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCc
Confidence            9999999886532                  8999999999999999999999999999995             78999


Q ss_pred             cceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......   ....++..|+|||.+.+..++.++||.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  199 (296)
T cd06655         161 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW  199 (296)
T ss_pred             cchhcccccccCCCcCCCccccCcchhcCCCCCchhhHH
Confidence            887543332   345788999999999998899999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.94  E-value=2e-25  Score=186.87  Aligned_cols=173  Identities=25%  Similarity=0.332  Sum_probs=140.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-CCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-~~~~~lv~e  150 (258)
                      .+||+|+||.||+|...... ...+..|++|.+...........+.+|+.+++.+ +|+||+++++++.. +...++++|
T Consensus        12 ~~i~~g~~g~V~~~~~~~~~-~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~   89 (280)
T cd05043          12 DLLQEGTFGRIFYGILIDEK-PGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGEPPFVLYP   89 (280)
T ss_pred             eeecccCCceEEEEEEecCC-CCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCCEEEEE
Confidence            48999999999999986311 1236889999998665666678899999999999 99999999998876 467899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.......         ......+++..++.++.|++.||.|||+++++|||||             ++|
T Consensus        90 ~~~~~~L~~~l~~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          90 YMNWGNLKLFLQQCRLGE---------ANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             cCCCCcHHHHHHhccccc---------cccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence            999999999997754210         0012458999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....+     ....++..|+|||++.+..++.++||.
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~  203 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVW  203 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHH
Confidence            99987543332     233456789999999998999999984

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.94  E-value=1.8e-25  Score=189.65  Aligned_cols=161  Identities=13%  Similarity=0.218  Sum_probs=136.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..||+|.+.....  ......+.+|+.+++.+ +||||+++++.+..++.+++||
T Consensus         7 ~~l~~g~~~~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           7 KLISNGAYGAVYLVRHK-----ETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             eEeecCCCeeEEEEEEC-----CCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEEE
Confidence            47999999999999987     5778999999975421  23456788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++...+.                 +++..+..++.|++.||.|||+++++|||||             ++
T Consensus        81 e~~~g~~L~~~l~~~~~-----------------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~  143 (305)
T cd05609          81 EYVEGGDCATLLKNIGA-----------------LPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLT  143 (305)
T ss_pred             ecCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEe
Confidence            99999999999987654                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc------------------CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH------------------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~------------------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....                  .....++..|+|||.+.+..++.++||.
T Consensus       144 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  200 (305)
T cd05609         144 DFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWW  200 (305)
T ss_pred             eCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHH
Confidence            99988642111                  1124577899999999988999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.93  E-value=1.8e-25  Score=187.24  Aligned_cols=160  Identities=16%  Similarity=0.144  Sum_probs=128.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHH---HHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEM---MKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~---l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      +||+|+||.||++...     .+++.||+|.+.....  ......+..|..+   ++.. .||||+.+++++...+..++
T Consensus         1 ~ig~g~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~   74 (278)
T cd05606           1 IIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSF   74 (278)
T ss_pred             CcccCCCeEEEEEEEe-----cCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCEEEE
Confidence            4799999999999886     5678999999865321  1112224444433   3344 79999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+++|+|.+++.....                 +++..+..|+.|++.||.|||+++|+|||||             
T Consensus        75 v~e~~~g~~L~~~l~~~~~-----------------l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~k  137 (278)
T cd05606          75 ILDLMNGGDLHYHLSQHGV-----------------FSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR  137 (278)
T ss_pred             EEecCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEE
Confidence            9999999999999876544                 9999999999999999999999999999995             


Q ss_pred             ccCCCcceeeecc-CCccccccccccccccccC-CCCccccee
Q psy12228        215 FIGFDLCILVFFH-DSTLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      ++|||++...... .....|+..|+|||++.+. .++.++||.
T Consensus       138 l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  180 (278)
T cd05606         138 ISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF  180 (278)
T ss_pred             EccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchH
Confidence            7899998754322 2456789999999999754 689999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.6e-25  Score=190.78  Aligned_cols=163  Identities=18%  Similarity=0.254  Sum_probs=138.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh--HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD--AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|.+......  .....+..|+++++.+ +|+||+++++.+.+....+++|
T Consensus         7 ~~ig~g~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           7 KLLGKGDVGRVFLVRLK-----GTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             eeecCCccEEEEEEEEc-----CCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEEEEE
Confidence            37999999999999987     46789999999764322  3556789999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+.+++|.+++.....               ..+++..+..++.|++.||.|||+.+++|+|||             ++
T Consensus        81 e~~~~~~L~~~~~~~~~---------------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~  145 (316)
T cd05574          81 DYCPGGELFRLLQRQPG---------------KCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLS  145 (316)
T ss_pred             EecCCCCHHHHHHhCCC---------------CccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEe
Confidence            99999999999876432               348999999999999999999999999999996             67


Q ss_pred             CCCcceeeeccC--------------------------------CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--------------------------------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--------------------------------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......                                ....||..|+|||++.+..++.++||.
T Consensus       146 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~  216 (316)
T cd05574         146 DFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWW  216 (316)
T ss_pred             ecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHH
Confidence            898876432211                                134678899999999998899999984

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.93  E-value=1.7e-25  Score=184.48  Aligned_cols=166  Identities=33%  Similarity=0.500  Sum_probs=139.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...... ......||+|+++........+.+..|+..+..+ +|+||+++++++.+.+..+++|||+
T Consensus         6 ~lg~g~~g~v~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~i~e~~   83 (258)
T smart00219        6 KLGEGAFGEVYKGTLKGLS-GEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMIVMEYM   83 (258)
T ss_pred             eeccCCCcceEEEEecCCC-CCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEEEEecc
Confidence            7899999999999987311 0124889999998765554677899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++.....               ..+++.++..++.|++.||.|||+++++|+|||             ++|||
T Consensus        84 ~~~~l~~~~~~~~~---------------~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg  148 (258)
T smart00219       84 EGGDLLDYLRKNRP---------------KELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFG  148 (258)
T ss_pred             CCCCHHHHHHhhhh---------------ccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccC
Confidence            99999999986542               128999999999999999999999999999995             78999


Q ss_pred             cceeeeccCC----ccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHDS----TLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~~----~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++........    ...+++.|+|||.+.+..++.++||.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~  188 (258)
T smart00219      149 LSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVW  188 (258)
T ss_pred             CceecccccccccccCCCcccccChHHhccCCCCcchhHH
Confidence            9876544321    12366889999999888899999974

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.93  E-value=2.2e-25  Score=186.68  Aligned_cols=165  Identities=17%  Similarity=0.179  Sum_probs=132.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++...     .++..||+|+++..........+..|+..+.+..+||||+++++++..++..+++|||
T Consensus         7 ~~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           7 EELGRGAYGVVDKMRHV-----PTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             EEecccCCeEEEEEEEc-----CCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            37999999999999987     5789999999976544344456667777644443999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~d  217 (258)
                      ++ |+|.+++.....             ....+++..+..++.|++.||.|||++ +++|||||             ++|
T Consensus        82 ~~-~~l~~~l~~~~~-------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~d  147 (283)
T cd06617          82 MD-TSLDKFYKKVYD-------------KGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCD  147 (283)
T ss_pred             hc-ccHHHHHHHhcc-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEee
Confidence            97 599988876432             123489999999999999999999997 99999995             789


Q ss_pred             CCcceeeeccC--Ccccccccccccccccc----CCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRN----QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~----~~~s~~~Dv~  255 (258)
                      ||++.......  ....++..|+|||++.+    ..++.++||.
T Consensus       148 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~  191 (283)
T cd06617         148 FGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVW  191 (283)
T ss_pred             cccccccccccccccccCCccccChhhcCCcccccccCccccch
Confidence            99987643322  33568899999999865    4568899975

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3e-25  Score=184.35  Aligned_cols=162  Identities=20%  Similarity=0.269  Sum_probs=136.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCC----CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--Cc
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG----HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GP  144 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~  144 (258)
                      ...||+|+||.||+|...     .++..||+|.+...    ........+.+|+.+++.+ +|+||+++++++.+.  ..
T Consensus         7 ~~~lg~g~~g~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           7 GKLLGRGAFGEVYLCYDA-----DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             eeeEccCCCeEEEEEEEc-----CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCE
Confidence            348999999999999987     57789999988532    1234456789999999999 999999999998764  45


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +++++||+++++|.+++.....                 +++..+..++.|++.||.|||+++++|+|||          
T Consensus        81 ~~~v~e~~~~~~L~~~~~~~~~-----------------l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~  143 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLKAYGA-----------------LTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG  143 (264)
T ss_pred             EEEEEEeCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence            8899999999999999987554                 8899999999999999999999999999985          


Q ss_pred             ---ccCCCcceeeecc------CCccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFH------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++.....      .....++..|+|||++.+..++.++||.
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  193 (264)
T cd06653         144 NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVW  193 (264)
T ss_pred             CEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHH
Confidence               7899998754321      1245688999999999998899999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.93  E-value=2.4e-25  Score=183.84  Aligned_cols=163  Identities=20%  Similarity=0.287  Sum_probs=136.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-CCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-~~~~~lv~  149 (258)
                      ..||+|++|.||++...     .++..||+|.+.... .....+.+.+|+.+++.+ +|+|++++++.+.. +..++++|
T Consensus         6 ~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv~   79 (257)
T cd08223           6 RVVGKGSYGEVSLVRHR-----TDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIVM   79 (257)
T ss_pred             EEecCCCCeEEEEEEEc-----CCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEEe
Confidence            37899999999999987     567889999996532 344556788999999999 99999999998764 44689999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++.....               ..+++.++..++.|++.|+.|||++|++|+|||             ++
T Consensus        80 e~~~~~~l~~~l~~~~~---------------~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~  144 (257)
T cd08223          80 GFCEGGDLYHKLKEQKG---------------KLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVG  144 (257)
T ss_pred             cccCCCcHHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEe
Confidence            99999999999986432               348999999999999999999999999999996             68


Q ss_pred             CCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......   ....+++.|+|||++.+..++.++||.
T Consensus       145 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  186 (257)
T cd08223         145 DLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVW  186 (257)
T ss_pred             cccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhH
Confidence            999987653321   345688999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.93  E-value=1e-25  Score=186.40  Aligned_cols=162  Identities=20%  Similarity=0.307  Sum_probs=140.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||.|+||.||+|...     .++..||+|++....  .....+.+.+|+.+++++ +||||+++++++..+...++|+
T Consensus         6 ~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~   79 (258)
T cd05578           6 RVIGKGAFGKVCIVQKR-----DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVV   79 (258)
T ss_pred             EEeccCCCceEEEEEEc-----cCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEE
Confidence            48999999999999987     577899999997532  224567899999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+.+++|.+++.....                 +++..+..++.|++.||.|||+++++|+|||             ++
T Consensus        80 e~~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~  142 (258)
T cd05578          80 DLLLGGDLRYHLSQKVK-----------------FSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHIT  142 (258)
T ss_pred             eCCCCCCHHHHHHhcCC-----------------cCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEe
Confidence            99999999999987644                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc--CCccccccccccccccccCCCCcccceeE
Q psy12228        217 GFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       217 dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                      |||++......  .....++..|+|||++.+..++.++||..
T Consensus       143 d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s  184 (258)
T cd05578         143 DFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWS  184 (258)
T ss_pred             ecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchh
Confidence            99988764433  24567888999999999988999999853

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.93  E-value=1.2e-25  Score=187.24  Aligned_cols=161  Identities=22%  Similarity=0.287  Sum_probs=134.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC---------hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS---------DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD  142 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~  142 (258)
                      ..||+|+||.||+|...     .++..+|+|.++....         ....+.+.+|+.+++.+ +||||+++++++...
T Consensus         7 ~~lg~g~~~~vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   80 (272)
T cd06629           7 ELIGKGTYGRVYLALNV-----TTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTE   80 (272)
T ss_pred             ceecccCceEEEEEeec-----CCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccC
Confidence            38999999999999976     5678999999863211         11235688899999999 999999999999999


Q ss_pred             CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------
Q psy12228        143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------  214 (258)
Q Consensus       143 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------  214 (258)
                      +..++||||+++|+|.+++.....                 +++..+..++.|++.||.|||+++++|+|||        
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~  143 (272)
T cd06629          81 EYLSIFLEYVPGGSIGSCLRTYGR-----------------FEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDA  143 (272)
T ss_pred             CceEEEEecCCCCcHHHHHhhccC-----------------CCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcC
Confidence            999999999999999999987654                 8999999999999999999999999999995        


Q ss_pred             -----ccCCCcceeeecc-----CCccccccccccccccccCC--CCccccee
Q psy12228        215 -----FIGFDLCILVFFH-----DSTLLKTTSTIASLILRNQK--VSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~s~~~Dv~  255 (258)
                           ++|||++......     .....++..|+|||++....  ++.++||.
T Consensus       144 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~  196 (272)
T cd06629         144 DGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIW  196 (272)
T ss_pred             CCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhH
Confidence                 7899988754321     12456788999999987754  78999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.93  E-value=1.9e-25  Score=187.30  Aligned_cols=163  Identities=22%  Similarity=0.289  Sum_probs=134.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|++|.||+|...     .++..||+|.++... .......+.+|+.+++.+ +||||+++++++.+++..++|||
T Consensus         6 ~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e   79 (285)
T cd07861           6 EKIGEGTYGVVYKGRNK-----KTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIFE   79 (285)
T ss_pred             eEecccCceEEEEEEEC-----CCCcEEEEEEeccccccCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEEe
Confidence            37999999999999987     567899999986432 222345688999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |++ ++|.+++.....              ...+++..+..++.||+.||.|||+++++|+|||             ++|
T Consensus        80 ~~~-~~l~~~~~~~~~--------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~d  144 (285)
T cd07861          80 FLS-MDLKKYLDSLPK--------------GQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLAD  144 (285)
T ss_pred             cCC-CCHHHHHhcCCC--------------CCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECc
Confidence            998 599998875432              1348999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ||++.......   ....+++.|+|||++.+ ..++.++||.
T Consensus       145 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  186 (285)
T cd07861         145 FGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIW  186 (285)
T ss_pred             ccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHH
Confidence            99987543322   23456889999999865 4578899974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.1e-25  Score=184.72  Aligned_cols=160  Identities=18%  Similarity=0.233  Sum_probs=132.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .++..||+|+++....  ......+..|..++....+|+||+++++++..++..++++|
T Consensus         3 ~l~~g~~~~v~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   77 (260)
T cd05611           3 PISKGAFGSVYLAKKR-----STGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVME   77 (260)
T ss_pred             cCCcCCCeeEEEEEec-----CCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEe
Confidence            6899999999999987     5678999999965321  22233455666555544489999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....                 +++..+..++.|++.||.|||+.+++|+||+             ++|
T Consensus        78 ~~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~d  140 (260)
T cd05611          78 YLNGGDCASLIKTLGG-----------------LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTD  140 (260)
T ss_pred             ccCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEee
Confidence            9999999999987654                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++..... .....++..|+|||.+.+..++.++||.
T Consensus       141 fg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~  177 (260)
T cd05611         141 FGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWW  177 (260)
T ss_pred             cccceeccc-cccCCCCcCccChhhhcCCCCcchhhhH
Confidence            998875433 3456788999999999988899999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.4e-25  Score=184.21  Aligned_cols=161  Identities=18%  Similarity=0.258  Sum_probs=138.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..+++|++... .....+.+.+|+.+++.+ +||||+++++++...+.++++|||
T Consensus         9 ~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           9 QRIGSGTYGDVYKARDI-----ATGELVAIKVIKLE-PGDDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             EEecCCCceEEEEeEec-----CCCCEEEEEEEEcC-chhhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEEEEeC
Confidence            37999999999999987     46678999999765 233567899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....                .+++..+..++.|++.||.|||+++++|+|||             ++||
T Consensus        82 ~~~~~l~~~~~~~~~----------------~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~  145 (262)
T cd06613          82 CGGGSLQDIYQVTRG----------------PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADF  145 (262)
T ss_pred             CCCCcHHHHHHhhcc----------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECcc
Confidence            999999999987522                28999999999999999999999999999995             7899


Q ss_pred             Ccceeeecc---CCccccccccccccccccC---CCCccccee
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILRNQ---KVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~~~---~~s~~~Dv~  255 (258)
                      |++......   .....++..|+|||.+.+.   .++.++||.
T Consensus       146 g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~  188 (262)
T cd06613         146 GVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIW  188 (262)
T ss_pred             ccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhH
Confidence            988754432   2345788899999999876   889999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.93  E-value=8.2e-26  Score=187.93  Aligned_cols=172  Identities=30%  Similarity=0.400  Sum_probs=137.7

Q ss_pred             eeeecCceEEEEEEEccccc-CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILK-QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|....... ...+..+|+|.+...........+.+|+.+++.+ +||||+++++++...+..+++|||
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEEEec
Confidence            68999999999999863221 1234689999987654445567899999999999 999999999999998899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------------  214 (258)
                      +++|+|.+++......          ......+++.++..++.|++.||.|||+++++|+|||                 
T Consensus        81 ~~~~~L~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~  150 (269)
T cd05044          81 MEGGDLLSYLRDARVE----------RFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVV  150 (269)
T ss_pred             cCCCcHHHHHHHhhhc----------ccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcce
Confidence            9999999999864321          0012347899999999999999999999999999975                 


Q ss_pred             -ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||+++......     ....++..|+|||++.+..++.++||.
T Consensus       151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  197 (269)
T cd05044         151 KIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVW  197 (269)
T ss_pred             EECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHH
Confidence             57888886543222     233456789999999999999999974

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.93  E-value=3e-25  Score=184.83  Aligned_cols=164  Identities=23%  Similarity=0.326  Sum_probs=134.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.....  ......||+|...........+.+.+|+.+++.+ .||||+++++++.+ +..++||||
T Consensus        12 ~~lg~g~~g~v~~~~~~~~--~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~~lv~e~   87 (270)
T cd05056          12 RCIGEGQFGDVYQGVYMSP--ENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPVWIVMEL   87 (270)
T ss_pred             eeeCCccceeEEEEEEecC--CCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCcEEEEEc
Confidence            4899999999999987521  0234579999997665556667899999999999 99999999999875 457899999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..+..++.|++.||.|||+++++|+|||             ++||
T Consensus        88 ~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~  151 (270)
T cd05056          88 APLGELRSYLQVNKY----------------SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDF  151 (270)
T ss_pred             CCCCcHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccC
Confidence            999999999976432                38999999999999999999999999999996             6799


Q ss_pred             CcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......    ....++..|+|||.+....++.++||.
T Consensus       152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  192 (270)
T cd05056         152 GLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVW  192 (270)
T ss_pred             ceeeecccccceecCCCCccccccChhhhccCCCCchhhhH
Confidence            9887543332    122334679999999988899999974

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.93  E-value=1.9e-25  Score=187.23  Aligned_cols=161  Identities=17%  Similarity=0.229  Sum_probs=134.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|++..... ....+.+.+|+.+++.+ +|+||+++++++..+...++|||
T Consensus         7 ~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           7 SKIGEGSYGVVFKCRNR-----ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             eeecccCCeEEEEEEEC-----CCCcEEEEEEEeecccCccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEEEEEe
Confidence            37899999999999987     5678999999864322 22335688999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |++++.|..++.....                 +++..+..++.|++.||.|||+++++|+|||             ++|
T Consensus        81 ~~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~d  143 (286)
T cd07847          81 YCDHTVLNELEKNPRG-----------------VPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCD  143 (286)
T ss_pred             ccCccHHHHHHhCCCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECc
Confidence            9999888877665433                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ||++.......   ....++..|+|||++.+ ..++.++||.
T Consensus       144 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~  185 (286)
T cd07847         144 FGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVW  185 (286)
T ss_pred             cccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhH
Confidence            99988654332   24567889999999876 5578899974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.93  E-value=2e-25  Score=185.36  Aligned_cols=158  Identities=25%  Similarity=0.376  Sum_probs=130.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .+ ..||+|.++....  ..+.+.+|+.+++.+ +||||+++++.+. ....++||||+
T Consensus        13 ~lg~g~~~~v~~~~~~-----~~-~~valK~~~~~~~--~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv~e~~   82 (262)
T cd05071          13 KLGQGCFGEVWMGTWN-----GT-TRVAIKTLKPGTM--SPEAFLQEAQVMKKL-RHEKLVQLYAVVS-EEPIYIVTEYM   82 (262)
T ss_pred             ecCCCCCCcEEEEEec-----CC-ceEEEEecccCcc--CHHHHHHHHHHHHhC-CCCCcceEEEEEC-CCCcEEEEEcC
Confidence            7999999999999875     23 4699999975322  235689999999999 9999999999875 45689999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....               ..+++..+..++.|++.||.|||+++++|||||             ++|||
T Consensus        83 ~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg  147 (262)
T cd05071          83 SKGSLLDFLKGEMG---------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG  147 (262)
T ss_pred             CCCcHHHHHhhccc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCC
Confidence            99999999986432               237999999999999999999999999999985             78999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......    ....++..|+|||++.+..++.++||.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dvw  187 (262)
T cd05071         148 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW  187 (262)
T ss_pred             ceeeccccccccccCCcccceecCHhHhccCCCCchhhHH
Confidence            987654332    133455789999999988999999974

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0612|consensus

Probab=99.93  E-value=5.3e-27  Score=216.34  Aligned_cols=160  Identities=20%  Similarity=0.245  Sum_probs=140.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||.|..++.+     .++..+|+|++++-.  ...+...|..|-.+|..- +.+-|+.++.+|.++.++|+|||
T Consensus        82 vIGrGaFGEV~lVr~k-----~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LYlVMd  155 (1317)
T KOG0612|consen   82 VIGRGAFGEVALVRHK-----STEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLYLVMD  155 (1317)
T ss_pred             HhcccccceeEEEEee-----ccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceEEEEe
Confidence            7999999999999998     688999999997521  233446688999999887 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||+||||...|.+...                 ++++.++.|+..|+.||+-||+.|+||||||             ++|
T Consensus       156 Y~pGGDlltLlSk~~~-----------------~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLAD  218 (1317)
T KOG0612|consen  156 YMPGGDLLTLLSKFDR-----------------LPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLAD  218 (1317)
T ss_pred             cccCchHHHHHhhcCC-----------------ChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeecc
Confidence            9999999999998775                 9999999999999999999999999999996             799


Q ss_pred             CCcceeeecc----CCcccccccccccccccc-----CCCCccccee
Q psy12228        218 FDLCILVFFH----DSTLLKTTSTIASLILRN-----QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~----~~~~~gt~~y~aPE~~~~-----~~~s~~~Dv~  255 (258)
                      ||.|......    .+..+|||.|++||++..     +.|++.+||-
T Consensus       219 FGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwW  265 (1317)
T KOG0612|consen  219 FGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWW  265 (1317)
T ss_pred             chhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchh
Confidence            9998765532    267899999999999853     5788999973

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.93  E-value=2.6e-25  Score=187.76  Aligned_cols=158  Identities=20%  Similarity=0.292  Sum_probs=135.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...     .++..||+|.+... .....+.+.+|+.+++.+ +||||+++++.+...+..++|+||+
T Consensus        26 ~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          26 KIGQGASGTVYTAIDV-----ATGQEVAIKQMNLQ-QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             EecCCCCeEEEEEEEc-----CCCCEEEEEEeccc-cchHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCcEEEEEecC
Confidence            7999999999999876     46688999998643 233346789999999999 8999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++....                  +++..+..++.|++.||.|||+++++|+|||             ++|||
T Consensus        99 ~~~~L~~~~~~~~------------------l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg  160 (293)
T cd06647          99 AGGSLTDVVTETC------------------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG  160 (293)
T ss_pred             CCCcHHHHHhhcC------------------CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCc
Confidence            9999999987532                  7899999999999999999999999999985             78999


Q ss_pred             cceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......   ....+++.|+|||++.+..++.++||.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~  199 (293)
T cd06647         161 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW  199 (293)
T ss_pred             ceecccccccccccccCChhhcCchhhccCCCCchhhHH
Confidence            887543332   345688899999999888899999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.93  E-value=5e-25  Score=182.53  Aligned_cols=161  Identities=20%  Similarity=0.344  Sum_probs=138.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|.++.... ....+.+.+|+.+++.+ +|+||+++++.+...+..++|+|
T Consensus         6 ~~lg~G~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06626           6 NKIGGGTFGKVYTAVNL-----DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFME   79 (264)
T ss_pred             eEeecCCCcEEEEEEEC-----CCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEEe
Confidence            38999999999999986     5678999999976433 24667899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....                 +++..+..++.|++.||.|||+++++|+|||             ++|
T Consensus        80 ~~~~~~L~~~~~~~~~-----------------~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d  142 (264)
T cd06626          80 YCSGGTLEELLEHGRI-----------------LDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGD  142 (264)
T ss_pred             cCCCCcHHHHHhhcCC-----------------CChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcc
Confidence            9999999999987544                 7899999999999999999999999999994             789


Q ss_pred             CCcceeeeccCC-------ccccccccccccccccCC---CCccccee
Q psy12228        218 FDLCILVFFHDS-------TLLKTTSTIASLILRNQK---VSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~-------~~~gt~~y~aPE~~~~~~---~s~~~Dv~  255 (258)
                      ||++........       ...++..|+|||++.+..   ++.++||.
T Consensus       143 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~  190 (264)
T cd06626         143 FGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIW  190 (264)
T ss_pred             cccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchH
Confidence            999876543321       346788999999998766   78999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0587|consensus

Probab=99.93  E-value=1.7e-25  Score=202.07  Aligned_cols=160  Identities=19%  Similarity=0.298  Sum_probs=136.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-----CCcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-----DGPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-----~~~~~l  147 (258)
                      +||.|.+|+||+++.+     .+++.+|+|++....+.+  ++...|.++++....|||++.++|++..     ++.+||
T Consensus        26 vig~Gtygkv~k~k~~-----~~~~~aa~kI~~~~~d~d--eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL   98 (953)
T KOG0587|consen   26 VIGNGTYGKVYKGRHV-----KTGQLAAIKIMDPTEDEE--EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL   98 (953)
T ss_pred             EEeeccceeEEEEeee-----ecCceeeeEeecCCcccc--HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence            8999999999999987     678899999987653333  4567889999999899999999999864     457999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      |||||.+|+..+++++...               ..+.|..+..|++.++.|+.|||.+.+||||||             
T Consensus        99 VMEfC~gGSVTDLVKn~~g---------------~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VK  163 (953)
T KOG0587|consen   99 VMEFCGGGSVTDLVKNTKG---------------NRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVK  163 (953)
T ss_pred             EeeccCCccHHHHHhhhcc---------------cchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEE
Confidence            9999999999999988653               459999999999999999999999999999994             


Q ss_pred             ccCCCcceeeecc---CCcccccccccccccccc-----CCCCcccce
Q psy12228        215 FIGFDLCILVFFH---DSTLLKTTSTIASLILRN-----QKVSVLLDL  254 (258)
Q Consensus       215 i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~s~~~Dv  254 (258)
                      ++|||++..+...   .++.+||+.|||||++.-     ..|+..+|+
T Consensus       164 LvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~  211 (953)
T KOG0587|consen  164 LVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDL  211 (953)
T ss_pred             EeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccch
Confidence            8999999876544   378999999999999853     355666775

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.93  E-value=1.4e-25  Score=186.07  Aligned_cols=161  Identities=19%  Similarity=0.240  Sum_probs=140.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...     .++..+|+|.+...........+.+|+++++.+ +||||+++++.+...+..++++||+
T Consensus         8 ~ig~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           8 ELGAGNSGVVSKVLHR-----PTGKIMAVKTIRLEINEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             HhcCCCCeEEEEEEEc-----CCCcEEEEEEEecccChHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEEEEec
Confidence            7899999999999987     577899999998765556667899999999999 8999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------------ccCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------------FIGF  218 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------------i~df  218 (258)
                      ++++|.+++.....                .+++..+..++.|++.||.|||+ .+++|+|||             ++||
T Consensus        82 ~~~~L~~~~~~~~~----------------~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~  145 (265)
T cd06605          82 DGGSLDKILKEVQG----------------RIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDF  145 (265)
T ss_pred             CCCcHHHHHHHccC----------------CCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeec
Confidence            99999999987532                28999999999999999999999 999999995             7899


Q ss_pred             CcceeeeccC-CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++....... ....++..|+|||++.+..++.++||.
T Consensus       146 g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~  183 (265)
T cd06605         146 GVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIW  183 (265)
T ss_pred             ccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHH
Confidence            9876543221 237788999999999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3.8e-25  Score=184.78  Aligned_cols=161  Identities=20%  Similarity=0.319  Sum_probs=137.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhc--CCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG--QHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|.++..........+.+|+.+++.+.  .|||++++++++..+...+++|
T Consensus         7 ~~l~~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           7 ELIGRGAYGAVYRGKHV-----PTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hheeccCCceEEEEEEc-----CCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            37999999999999987     5778999999976545555677889999999993  3999999999999988999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++... .                 +++..++.++.|++.||.|||+.+++|+||+             ++
T Consensus        82 e~~~~~~L~~~~~~~-~-----------------l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~  143 (277)
T cd06917          82 EYAEGGSVRTLMKAG-P-----------------IAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLC  143 (277)
T ss_pred             ecCCCCcHHHHHHcc-C-----------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEc
Confidence            999999999998653 2                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      |||++.......   ....|+..|+|||.+.+ ..++.++||.
T Consensus       144 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  186 (277)
T cd06917         144 DFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIW  186 (277)
T ss_pred             cCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHH
Confidence            999988654432   34578899999999875 4568899974

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.93  E-value=3e-25  Score=185.98  Aligned_cols=162  Identities=19%  Similarity=0.306  Sum_probs=133.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc------CCcE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ------DGPL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~------~~~~  145 (258)
                      ..||+|+||.||+|...     .++..+|+|++...  ......+..|+.++..+.+|+||+++++++..      ....
T Consensus        22 ~~lg~g~~~~v~~~~~~-----~~~~~~a~K~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   94 (282)
T cd06636          22 EVVGNGTYGQVYKGRHV-----KTGQLAAIKVMDVT--EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL   94 (282)
T ss_pred             eeeccCCCeEEEEEEEc-----CCCcEEEEEEEecC--hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence            48999999999999987     56789999998653  33445688999999998679999999999853      3568


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +++|||+++|+|.+++.....               ..+++..+..++.||+.||.|||+++++|+|||           
T Consensus        95 ~iv~e~~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~  159 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNTKG---------------NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAE  159 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHccC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC
Confidence            999999999999999976543               237889999999999999999999999999995           


Q ss_pred             --ccCCCcceeeecc---CCccccccccccccccc-----cCCCCccccee
Q psy12228        215 --FIGFDLCILVFFH---DSTLLKTTSTIASLILR-----NQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~s~~~Dv~  255 (258)
                        ++|||++......   .....|++.|+|||++.     +..++.++||.
T Consensus       160 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~Dvw  210 (282)
T cd06636         160 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIW  210 (282)
T ss_pred             EEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchh
Confidence              7899988754322   24567889999999986     35688899974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.93  E-value=3.4e-25  Score=183.55  Aligned_cols=158  Identities=26%  Similarity=0.356  Sum_probs=130.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...      .+..+|+|.++....  ..+.+.+|+.+++++ +|+||+++++++. .+..+++|||+
T Consensus        13 ~ig~g~~~~v~~~~~~------~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv~e~~   82 (260)
T cd05070          13 KLGNGQFGEVWMGTWN------GNTKVAVKTLKPGTM--SPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEPIYIVTEYM   82 (260)
T ss_pred             eeccccCceEEEEEec------CCceeEEEEecCCCC--CHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCCcEEEEEec
Confidence            7999999999999875      346799999976422  235689999999999 9999999999885 45688999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++.....               ..+++..+..++.|++.||.|||+++++|||||             ++|||
T Consensus        83 ~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg  147 (260)
T cd05070          83 SKGSLLDFLKDGEG---------------RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFG  147 (260)
T ss_pred             CCCcHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCce
Confidence            99999999976432               238999999999999999999999999999995             78999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......    ....++..|+|||++.+..++.++||.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  187 (260)
T cd05070         148 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW  187 (260)
T ss_pred             eeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhH
Confidence            987654332    122345679999999988999999974

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.93  E-value=3.7e-25  Score=186.29  Aligned_cols=162  Identities=17%  Similarity=0.207  Sum_probs=133.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|...     .++..||+|++...........+.+|+.+++.+ +|+||+++++++.+++..++|+|
T Consensus        10 ~~~ig~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870          10 LEKLGEGSYATVYKGISR-----INGQLVALKVISMKTEEGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             EEEEEecCCEEEEEEEEc-----CCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEEEEe
Confidence            348999999999999987     567899999997543333344678999999999 99999999999999889999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+. ++|.+++.....                .+++..+..++.|++.||.|||+++|+|+|||             ++|
T Consensus        84 ~~~-~~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~D  146 (291)
T cd07870          84 YMH-TDLAQYMIQHPG----------------GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLAD  146 (291)
T ss_pred             ccc-CCHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEec
Confidence            996 688888765432                27888999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccC-CCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      ||+++......   ....+++.|+|||++.+. .++.++||.
T Consensus       147 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  188 (291)
T cd07870         147 FGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIW  188 (291)
T ss_pred             cccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHH
Confidence            99987543322   344578899999998764 578889974

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.93  E-value=6.9e-25  Score=181.55  Aligned_cols=161  Identities=17%  Similarity=0.266  Sum_probs=141.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|++|.||++...     .++..|++|++...........+.+|+..+..+ +|+||+++++++...+..++++||
T Consensus         7 ~~i~~g~~~~v~~~~~~-----~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           7 KVLGQGSSGVVYKVRHK-----PTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             eeeeecCCeEEEEEEEc-----CCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEEEEe
Confidence            48999999999999987     578999999997654435567899999999999 899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------------i~d  217 (258)
                      +++++|.+++.....                 +++..+..++.|++.||.|||+ ++++|+||+             ++|
T Consensus        81 ~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~d  143 (264)
T cd06623          81 MDGGSLADLLKKVGK-----------------IPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIAD  143 (264)
T ss_pred             cCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEcc
Confidence            999999999987654                 8999999999999999999999 999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......   ....++..|+|||.+.+..++.++||.
T Consensus       144 f~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~  184 (264)
T cd06623         144 FGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIW  184 (264)
T ss_pred             CccceecccCCCcccceeecccccCHhhhCCCCCCchhhHH
Confidence            99888654433   245678899999999998899999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.93  E-value=5.9e-25  Score=185.10  Aligned_cols=176  Identities=16%  Similarity=0.216  Sum_probs=137.8

Q ss_pred             eeeceeeec-cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeee
Q psy12228         60 INVLTVTIN-SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV  138 (258)
Q Consensus        60 ~~~~~~~~~-~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~  138 (258)
                      .++...+.+ .....||+|+||.||++...     .++..+|+|++...  ......+.+|+.++.++.+||||++++++
T Consensus        15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~-----~~~~~~aik~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   87 (291)
T cd06639          15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNK-----KDGSLAAVKILDPI--SDVDEEIEAEYNILQSLPNHPNVVKFYGM   87 (291)
T ss_pred             ccCCCCCCCeEEEEEeecCCCeEEEEEEEC-----CCCCEEEEEEeccc--ccHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence            344443333 44458999999999999987     57789999999753  22235677899999998789999999999


Q ss_pred             EEcC-----CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc
Q psy12228        139 CTQD-----GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV  213 (258)
Q Consensus       139 ~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl  213 (258)
                      +...     +..++||||+++|+|.++++....             ....+++..++.++.|++.||.|||+++++|+||
T Consensus        88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~-------------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dl  154 (291)
T cd06639          88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLI-------------CGQRLDEAMISYILYGALLGLQHLHNNRIIHRDV  154 (291)
T ss_pred             EEeccccCCCeeEEEEEECCCCcHHHHHHHhhh-------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            8753     358999999999999999875321             1234899999999999999999999999999999


Q ss_pred             c-------------ccCCCcceeeecc---CCccccccccccccccccC-----CCCccccee
Q psy12228        214 R-------------FIGFDLCILVFFH---DSTLLKTTSTIASLILRNQ-----KVSVLLDLI  255 (258)
Q Consensus       214 K-------------i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~s~~~Dv~  255 (258)
                      |             ++|||++......   .....++..|+|||++...     .++.++||.
T Consensus       155 kp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~  217 (291)
T cd06639         155 KGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVW  217 (291)
T ss_pred             CHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchH
Confidence            5             7899988754332   2355788999999998653     368899974

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.93  E-value=4.1e-25  Score=183.00  Aligned_cols=159  Identities=27%  Similarity=0.360  Sum_probs=132.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||+|...      ++..||+|.+.....  ....+.+|+.+++.+ +|+||+++++++. .+..+++|||
T Consensus        12 ~~ig~G~~g~v~~~~~~------~~~~~a~K~~~~~~~--~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05067          12 KKLGAGQFGEVWMGYYN------GHTKVAIKSLKQGSM--SPEAFLAEANLMKQL-QHPRLVRLYAVVT-QEPIYIITEY   81 (260)
T ss_pred             eeeccCccceEEeeecC------CCceEEEEEecCCCC--cHHHHHHHHHHHHhc-CCcCeeeEEEEEc-cCCcEEEEEc
Confidence            38999999999999864      457899999975422  245789999999999 9999999999874 4578999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....               ..+++.++..++.|++.||.|||+.+++|||||             ++||
T Consensus        82 ~~~~~L~~~~~~~~~---------------~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~df  146 (260)
T cd05067          82 MENGSLVDFLKTPEG---------------IKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADF  146 (260)
T ss_pred             CCCCCHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccC
Confidence            999999999876432               348999999999999999999999999999996             6899


Q ss_pred             CcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......    ....++..|+|||++.+..++.++||.
T Consensus       147 g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~  187 (260)
T cd05067         147 GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW  187 (260)
T ss_pred             cceeecCCCCcccccCCcccccccCHHHhccCCcCcccchH
Confidence            9987654222    233456789999999988899999984

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.93  E-value=5.1e-25  Score=181.84  Aligned_cols=163  Identities=17%  Similarity=0.254  Sum_probs=138.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCC-CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||.+...     .+++.||+|.+... ........+.+|+.+++.+ +||||+++++++...+..++|+|
T Consensus         6 ~~lg~g~~g~~~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08218           6 KKIGEGSFGKAILVKSK-----EDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVMD   79 (256)
T ss_pred             EEeccCCceEEEEEEEc-----CCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEEe
Confidence            48999999999999987     56789999999643 2344556789999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....               ..+++..+..|+.|++.||.|||+++++|+||+             ++|
T Consensus        80 ~~~~~~l~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d  144 (256)
T cd08218          80 YCEGGDLYKKINAQRG---------------VLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGD  144 (256)
T ss_pred             cCCCCcHHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEee
Confidence            9999999999976432               237899999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......   ....|++.|+|||++.+..++.++||.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~  185 (256)
T cd08218         145 FGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIW  185 (256)
T ss_pred             ccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchh
Confidence            99887543322   245688899999999998999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.93  E-value=1.3e-25  Score=188.36  Aligned_cols=161  Identities=19%  Similarity=0.243  Sum_probs=133.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|.++.... ......+.+|+.+++.+ +||||+++++++.+....++++|
T Consensus         6 ~~l~~g~~~~vy~~~~~-----~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   79 (284)
T cd07839           6 EKIGEGTYGTVFKAKNR-----ETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVFE   79 (284)
T ss_pred             EEecccCCeEEEEEEEC-----CCCcEEEEEEeecccccccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEEe
Confidence            37899999999999987     5778999999965322 22235678899999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++ +|.+++.....                .+++..++.++.||+.||.|||+++++|||||             ++|
T Consensus        80 ~~~~-~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~d  142 (284)
T cd07839          80 YCDQ-DLKKYFDSCNG----------------DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLAD  142 (284)
T ss_pred             cCCC-CHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECc
Confidence            9975 89888876432                28999999999999999999999999999985             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccC-CCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      ||+++......   ....+++.|+|||++.+. .++.++||.
T Consensus       143 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw  184 (284)
T cd07839         143 FGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW  184 (284)
T ss_pred             cchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHH
Confidence            99987544332   245678899999998774 468999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.93  E-value=2.1e-25  Score=189.11  Aligned_cols=164  Identities=23%  Similarity=0.348  Sum_probs=133.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.+..... .....||+|.+...........+.+|+.+++.+ +||||+++++++... ..++++||+
T Consensus        14 ~lg~G~~g~vy~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~~~~v~e~~   90 (303)
T cd05110          14 VLGSGAFGTVYKGIWVPEGE-TVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-TIQLVTQLM   90 (303)
T ss_pred             ccccCCCccEEEEEEecCCC-cceeeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-Cceeeehhc
Confidence            79999999999998752111 112468999997654444455789999999999 999999999998754 567999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..+..++.|++.||.|||+++|+|||||             ++|||
T Consensus        91 ~~g~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg  154 (303)
T cd05110          91 PHGCLLDYVHEHKD----------------NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFG  154 (303)
T ss_pred             CCCCHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccc
Confidence            99999999976542                38999999999999999999999999999995             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......     ....++..|+|||++.+..++.++||.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Diw  195 (303)
T cd05110         155 LARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVW  195 (303)
T ss_pred             ccccccCcccccccCCCccccccCCHHHhccCCCChHHHHH
Confidence            998643322     123446789999999999999999974

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.93  E-value=3.8e-25  Score=182.10  Aligned_cols=160  Identities=28%  Similarity=0.364  Sum_probs=135.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||++...     . +..||+|.+...........+.+|+.+++.+ .|+||+++++++.+....++||||+
T Consensus         2 ~lg~g~~g~v~~~~~~-----~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~   74 (251)
T cd05041           2 KIGKGNFGDVYKGVLK-----G-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELV   74 (251)
T ss_pred             ccccCCCceEEEEEEe-----C-CCcEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcC
Confidence            6899999999999986     4 7899999998655555667899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++.....                .+++..+..++.+++.||.|||+++++|||||             ++|||
T Consensus        75 ~~~~l~~~l~~~~~----------------~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g  138 (251)
T cd05041          75 PGGSLLTFLRKKKN----------------RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFG  138 (251)
T ss_pred             CCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeecc
Confidence            99999999976432                38899999999999999999999999999985             78899


Q ss_pred             cceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......     .....+..|+|||.+.+..++.++||.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  179 (251)
T cd05041         139 MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVW  179 (251)
T ss_pred             ccccccCCcceeccccCcceeccCChHhhccCCCCcchhHH
Confidence            887543211     122335679999999988999999974

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.93  E-value=2.5e-25  Score=183.48  Aligned_cols=159  Identities=18%  Similarity=0.306  Sum_probs=138.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..+++|.++..   ...+.+.+|+.+++.+ +|+||+++++++.+....++++||
T Consensus         9 ~~i~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~---~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           9 EKLGEGSYGSVYKAIHK-----ETGQVVAIKVVPVE---EDLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             hhhcCCCCeEEEEEEEc-----CCCcEEEEEEeecH---HHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEEEec
Confidence            37999999999999987     45789999999753   2267899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....                .+++..+..++.|++.||.|||+.+++|+||+             ++||
T Consensus        80 ~~~~~L~~~l~~~~~----------------~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~df  143 (256)
T cd06612          80 CGAGSVSDIMKITNK----------------TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADF  143 (256)
T ss_pred             CCCCcHHHHHHhCcc----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEccc
Confidence            999999999976442                38999999999999999999999999999994             7899


Q ss_pred             CcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......   ....++..|+|||++.+..++.++||.
T Consensus       144 g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  183 (256)
T cd06612         144 GVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIW  183 (256)
T ss_pred             ccchhcccCccccccccCCccccCHHHHhcCCCCchhhHH
Confidence            9887654332   345678899999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.93  E-value=4.4e-25  Score=185.03  Aligned_cols=161  Identities=20%  Similarity=0.233  Sum_probs=136.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|++..... ......+.+|+.+++.+ +||||+++++++..+...++|+|
T Consensus         6 ~~l~~g~~~~v~~~~~~-----~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e   79 (286)
T cd07832           6 GRIGEGAHGIVFKAKDR-----ETGETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVME   79 (286)
T ss_pred             eecccCCCcEEEEEEEC-----CCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEec
Confidence            37899999999999987     5678999999975432 34456799999999999 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+ +++|.+++.....                .+++.+++.++.||+.||.|||+++++|+|||             ++|
T Consensus        80 ~~-~~~L~~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~d  142 (286)
T cd07832          80 YM-PSDLSEVLRDEER----------------PLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIAD  142 (286)
T ss_pred             cc-CCCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEee
Confidence            99 8999999876442                38999999999999999999999999999995             689


Q ss_pred             CCcceeeeccC----CccccccccccccccccC-CCCccccee
Q psy12228        218 FDLCILVFFHD----STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~----~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      ||++.......    ....++..|+|||++.+. .++.++||.
T Consensus       143 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  185 (286)
T cd07832         143 FGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLW  185 (286)
T ss_pred             eeecccccCCCCCccccccCcccccCceeeeccccCCchhHHH
Confidence            99887654332    345788999999998654 468999985

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.93  E-value=1.8e-25  Score=187.51  Aligned_cols=161  Identities=20%  Similarity=0.309  Sum_probs=134.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|.+...... ...+.+.+|+++++.+ +||||+++++++.+++..++|+|
T Consensus         7 ~~lg~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           7 GLVGEGSYGMVMKCKHK-----ETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             eeeccCCCeEEEEEEEC-----CCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEEEe
Confidence            48999999999999987     46789999998653322 2346788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|..+......                 +++..+..++.|++.||.|||+.+++|+||+             ++|
T Consensus        81 ~~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~d  143 (286)
T cd07846          81 FVDHTVLDDLEKYPNG-----------------LDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCD  143 (286)
T ss_pred             cCCccHHHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEe
Confidence            9999888877665433                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ||++.......   ....++..|+|||++.+ ..++.++||.
T Consensus       144 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  185 (286)
T cd07846         144 FGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIW  185 (286)
T ss_pred             eeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHH
Confidence            99987643332   23567889999999875 4568889974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.93  E-value=5e-25  Score=185.94  Aligned_cols=158  Identities=20%  Similarity=0.255  Sum_probs=136.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||++...     .++..||+|.+... .......+.+|+.+++.+ +|+||+++++.+..++..+++|||+
T Consensus        27 ~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~   99 (292)
T cd06657          27 KIGEGSTGIVCIATVK-----SSGKLVAVKKMDLR-KQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFL   99 (292)
T ss_pred             HcCCCCCeEEEEEEEc-----CCCeEEEEEEeccc-chhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEEEEecC
Confidence            6999999999999987     57899999998653 334456799999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++... .                 +++..+..++.|++.||.|||++|++|+|||             ++|||
T Consensus       100 ~~~~L~~~~~~~-~-----------------~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg  161 (292)
T cd06657         100 EGGALTDIVTHT-R-----------------MNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG  161 (292)
T ss_pred             CCCcHHHHHhcC-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccc
Confidence            999999987542 2                 7999999999999999999999999999995             78999


Q ss_pred             cceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......   ....+++.|+|||.+.+..++.++||.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~  200 (292)
T cd06657         162 FCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIW  200 (292)
T ss_pred             cceecccccccccccccCccccCHHHhcCCCCCchhhHH
Confidence            887543321   345688999999999888889999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.93  E-value=7.8e-25  Score=183.26  Aligned_cols=166  Identities=28%  Similarity=0.395  Sum_probs=137.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv~  149 (258)
                      ..||+|+||.||++.+... ...++..+|+|+++..........|.+|+.+++.+ .|+||+++++++..  ....+++|
T Consensus        10 ~~ig~g~~~~v~~~~~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~   87 (284)
T cd05038          10 KQLGEGHFGKVELCRYDPL-GDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-DHENIVKYKGVCEKPGGRSLRLIM   87 (284)
T ss_pred             eeeccCCCeeEEEeeecCC-CCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC-CCCChheEEeeeecCCCCceEEEE
Confidence            3799999999999997521 12457899999998654434567899999999999 99999999999887  55789999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++.....                .+++..+..++.|++.||.|||+++++|+|||             ++
T Consensus        88 e~~~~~~l~~~l~~~~~----------------~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~  151 (284)
T cd05038          88 EYLPSGSLRDYLQRHRD----------------QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKIS  151 (284)
T ss_pred             ecCCCCCHHHHHHhCcc----------------ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEc
Confidence            99999999999987542                28999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......      ....++..|+|||.+.+..++.++||.
T Consensus       152 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~  196 (284)
T cd05038         152 DFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVW  196 (284)
T ss_pred             ccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchH
Confidence            999888654221      123445679999999988999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.93  E-value=3.3e-25  Score=182.98  Aligned_cols=157  Identities=27%  Similarity=0.386  Sum_probs=131.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++...       +..||+|.++...   ....+.+|+.+++.+ +||||+++++++..+ ..+++|||
T Consensus        12 ~~lg~g~~g~v~~~~~~-------~~~~~iK~~~~~~---~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~~v~e~   79 (254)
T cd05083          12 EIIGEGEFGAVLQGEYT-------GQKVAVKNIKCDV---TAQAFLEETAVMTKL-HHKNLVRLLGVILHN-GLYIVMEL   79 (254)
T ss_pred             eeeccCCCCceEecccC-------CCceEEEeecCcc---hHHHHHHHHHHHHhC-CCCCcCeEEEEEcCC-CcEEEEEC
Confidence            48999999999998653       4779999997532   235788999999999 999999999998765 47899999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....               ..+++..+..++.|++.||.|||++|++|||||             ++||
T Consensus        80 ~~~~~L~~~l~~~~~---------------~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Df  144 (254)
T cd05083          80 MSKGNLVNFLRTRGR---------------ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDF  144 (254)
T ss_pred             CCCCCHHHHHHhcCc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCC
Confidence            999999999986542               238999999999999999999999999999995             7899


Q ss_pred             CcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++............+..|+|||.+.+..++.++||.
T Consensus       145 g~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~  181 (254)
T cd05083         145 GLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVW  181 (254)
T ss_pred             ccceeccccCCCCCCCceecCHHHhccCCcCchhhHH
Confidence            9987644333344455789999999988999999974

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.93  E-value=8.5e-25  Score=181.19  Aligned_cols=160  Identities=28%  Similarity=0.382  Sum_probs=132.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||++...      .+..+|+|.++..  ....+.+.+|+.+++.+ +|+||+++++.+.. ...+++||
T Consensus        11 ~~~lg~g~~~~vy~~~~~------~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~~~~~v~e   80 (260)
T cd05073          11 EKKLGAGQFGEVWMATYN------KHTKVAVKTMKPG--SMSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-EPIYIITE   80 (260)
T ss_pred             EeEecCccceEEEEEEec------CCccEEEEecCCC--hhHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-CCeEEEEE
Confidence            348999999999999864      3456999998753  33456789999999999 99999999999887 67899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....               ..+++..+..++.|++.||.|||+++++|+|||             ++|
T Consensus        81 ~~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d  145 (260)
T cd05073          81 FMAKGSLLDFLKSDEG---------------SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIAD  145 (260)
T ss_pred             eCCCCcHHHHHHhCCc---------------cccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECC
Confidence            9999999999986432               237889999999999999999999999999985             789


Q ss_pred             CCcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......    ....++..|+|||++....++.++||.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  187 (260)
T cd05073         146 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW  187 (260)
T ss_pred             CcceeeccCCCcccccCCcccccccCHhHhccCCcCccccch
Confidence            99887543322    123345679999999988899999974

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.93  E-value=7.4e-25  Score=181.69  Aligned_cols=164  Identities=18%  Similarity=0.211  Sum_probs=139.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||.|+||.||+|...     .++..+|+|++...........+.+|+..++.+ +|+||+++++.+..++..++++|+
T Consensus         7 ~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           7 EVIGVGATAVVYAAICL-----PNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             eeecCCCCeEEEEEEEc-----CCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEEEec
Confidence            47999999999999986     467889999997654444667899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....              ...+++..+..++.|++.||.|||+++++|+|||             ++||
T Consensus        81 ~~~~~l~~~~~~~~~--------------~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df  146 (267)
T cd06610          81 LSGGSLLDIMKSSYP--------------RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADF  146 (267)
T ss_pred             cCCCcHHHHHHHhcc--------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccc
Confidence            999999999986432              1238999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC-------CccccccccccccccccC-CCCccccee
Q psy12228        219 DLCILVFFHD-------STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-------~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      |++.......       ....++..|+|||++... .++.++||.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~  191 (267)
T cd06610         147 GVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIW  191 (267)
T ss_pred             chHHHhccCccccccccccccCChhhcChHHHccccCcCcccchH
Confidence            9887544332       234688999999998876 779999985

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.93  E-value=5.4e-25  Score=183.37  Aligned_cols=153  Identities=19%  Similarity=0.276  Sum_probs=127.0

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeCC
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAP  153 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~  153 (258)
                      ||+|+||.||++...     .++..+|+|.+.......      .|+.....+.+||||+++++.+...+..++||||++
T Consensus        24 lg~g~~g~v~~~~~~-----~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~   92 (267)
T PHA03390         24 LIDGKFGKVSVLKHK-----PTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIK   92 (267)
T ss_pred             ecCCCceEEEEEEEc-----CCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCC
Confidence            699999999999987     577899999986532111      123333333379999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------ccCCC
Q psy12228        154 HGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------FIGFD  219 (258)
Q Consensus       154 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i~dfg  219 (258)
                      +|+|.+++.....                 +++..+..++.|+++||.|||+.+++|||||              ++|||
T Consensus        93 ~~~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg  155 (267)
T PHA03390         93 DGDLFDLLKKEGK-----------------LSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYG  155 (267)
T ss_pred             CCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence            9999999987654                 9999999999999999999999999999995              67888


Q ss_pred             cceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.... ......++..|+|||++.+..++.++||.
T Consensus       156 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  190 (267)
T PHA03390        156 LCKIIG-TPSCYDGTLDYFSPEKIKGHNYDVSFDWW  190 (267)
T ss_pred             cceecC-CCccCCCCCcccChhhhcCCCCCchhhHH
Confidence            887543 23455788999999999998999999984

>KOG0695|consensus

Probab=99.93  E-value=2e-26  Score=189.07  Aligned_cols=162  Identities=17%  Similarity=0.283  Sum_probs=143.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      -.+||+|+|.+|..++++     .+.+.+|+|+++++.  .+++..-...|-.++.+.++||.+|.+..+|.+...+++|
T Consensus       255 l~vigrgsyakvl~~~~~-----~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  255 LRVIGRGSYAKVLLVRLK-----KTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             eeeecCcchhhhhheehc-----ccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            348999999999999998     688999999997653  3444556778888898888999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      .||.++|+|.-.+++++.                 ++++.++.+...|+.||.|||++|||.||||             +
T Consensus       330 ieyv~ggdlmfhmqrqrk-----------------lpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikl  392 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQRQRK-----------------LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKL  392 (593)
T ss_pred             EEEecCcceeeehhhhhc-----------------CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceee
Confidence            999999999999988877                 9999999999999999999999999999996             6


Q ss_pred             cCCCcceeee-cc--CCccccccccccccccccCCCCcccce
Q psy12228        216 IGFDLCILVF-FH--DSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       216 ~dfgl~~~~~-~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      .|+|+++.-. .+  .++++|||.|+|||.+++..|+.++||
T Consensus       393 tdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdw  434 (593)
T KOG0695|consen  393 TDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDW  434 (593)
T ss_pred             cccchhhcCCCCCcccccccCCCcccchhhhcccccCceehH
Confidence            7999998532 22  378999999999999999999999996

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.93  E-value=8.3e-25  Score=183.88  Aligned_cols=159  Identities=20%  Similarity=0.276  Sum_probs=136.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|++|.||++...     .++..+++|+++.. .....+.+.+|+.+++.+ +||||+++++++...+..++++||
T Consensus        25 ~~lg~g~~g~v~~~~~~-----~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~e~   97 (285)
T cd06648          25 VKIGEGSTGIVCIATDK-----STGRQVAVKKMDLR-KQQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVMEF   97 (285)
T ss_pred             eEeccCCCeEEEEEEEC-----CCCCEEEEEEEecc-chhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEEec
Confidence            38999999999999976     46789999998653 333446688999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.. ..                 +++..+..++.|++.||.|||+++++|||||             ++||
T Consensus        98 ~~~~~L~~~~~~-~~-----------------~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~  159 (285)
T cd06648          98 LEGGALTDIVTH-TR-----------------MNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDF  159 (285)
T ss_pred             cCCCCHHHHHHh-CC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEccc
Confidence            999999999877 33                 8999999999999999999999999999995             7788


Q ss_pred             CcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......   ....|++.|+|||++.+..++.++||.
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  199 (285)
T cd06648         160 GFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIW  199 (285)
T ss_pred             ccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHH
Confidence            8776433221   345688999999999998899999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=5.7e-25  Score=182.06  Aligned_cols=159  Identities=27%  Similarity=0.391  Sum_probs=133.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...      .+..||||.+....  ...+++.+|+.+++.+ +|+||+++++++......+++|||+
T Consensus        13 ~ig~g~~~~v~~~~~~------~~~~~~vK~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034          13 KLGAGQFGEVWMGTWN------GTTKVAVKTLKPGT--MSPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             eeccCcceEEEEEEEc------CCceEEEEEecCCc--cCHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCceEEEEecc
Confidence            8999999999999875      34679999997532  2345789999999999 9999999999999888999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++.....               ..+++..+..++.|++.||.|||+++++|+|||             ++|||
T Consensus        84 ~~~~L~~~i~~~~~---------------~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g  148 (261)
T cd05034          84 SKGSLLDFLKSGEG---------------KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFG  148 (261)
T ss_pred             CCCCHHHHHhcccc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccc
Confidence            99999999987542               348999999999999999999999999999995             78999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......    .....+..|+|||.+.+..++.++||.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  188 (261)
T cd05034         149 LARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVW  188 (261)
T ss_pred             cceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHH
Confidence            887643221    122345689999999998899999974

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=5.5e-25  Score=181.55  Aligned_cols=163  Identities=18%  Similarity=0.278  Sum_probs=137.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||++..+     .++..+|+|.+.... .....+.+.+|+.+++.+ +|+||+++++.+.+++..++++|
T Consensus         6 ~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e   79 (257)
T cd08225           6 KKIGEGSFGKIYLAKAK-----SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVME   79 (257)
T ss_pred             EEecCCCcceEEEEEEc-----CCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEEe
Confidence            47999999999999997     567889999996432 223456788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------cc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------FI  216 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i~  216 (258)
                      |+++++|.+++.....               ..+++..+..++.|++.||.|||+++++|+|||              ++
T Consensus        80 ~~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~  144 (257)
T cd08225          80 YCDGGDLMKRINRQRG---------------VLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLG  144 (257)
T ss_pred             cCCCCcHHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEec
Confidence            9999999999976442               237999999999999999999999999999995              67


Q ss_pred             CCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||.+.......   ....|++.|+|||++.+..++.++||.
T Consensus       145 d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~  186 (257)
T cd08225         145 DFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIW  186 (257)
T ss_pred             ccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHH
Confidence            888876543322   234688899999999988899999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.93  E-value=6.6e-25  Score=181.88  Aligned_cols=158  Identities=25%  Similarity=0.354  Sum_probs=130.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...      .+..+|+|.+....  ...+.+.+|+.+++.+ +|+||+++++++. .+..+++|||+
T Consensus        13 ~ig~g~~~~v~~~~~~------~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~   82 (260)
T cd05069          13 KLGQGCFGEVWMGTWN------GTTKVAIKTLKPGT--MMPEAFLQEAQIMKKL-RHDKLVPLYAVVS-EEPIYIVTEFM   82 (260)
T ss_pred             eecCcCCCeEEEEEEc------CCceEEEEEcccCC--ccHHHHHHHHHHHHhC-CCCCeeeEEEEEc-CCCcEEEEEcC
Confidence            7999999999999875      23469999987532  2345688999999999 9999999999875 45688999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....               ..+++..+..++.|++.||.|||+++++|+|||             ++|||
T Consensus        83 ~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg  147 (260)
T cd05069          83 GKGSLLDFLKEGDG---------------KYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFG  147 (260)
T ss_pred             CCCCHHHHHhhCCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCc
Confidence            99999999976432               347999999999999999999999999999995             78999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......    ....++..|+|||.+.+..++.++||.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~  187 (260)
T cd05069         148 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW  187 (260)
T ss_pred             cceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHH
Confidence            987643332    123456789999999988899999974

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.93  E-value=3.7e-25  Score=183.01  Aligned_cols=159  Identities=20%  Similarity=0.325  Sum_probs=136.7

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ||+|+||.||++...     .++..+|+|++.....  ....+.+.+|+.+++.+ +||||+++++.+......++++||
T Consensus         1 lg~g~~~~vy~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~   74 (265)
T cd05579           1 ISKGAYGRVFLAKKK-----STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVMEY   74 (265)
T ss_pred             CCCCCceEEEEEEEC-----CCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEec
Confidence            589999999999987     5678999999975422  24456789999999999 899999999999999899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.+...                 +++..+..++.|++.||.|||+++++|+||+             ++||
T Consensus        75 ~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~df  137 (265)
T cd05579          75 LPGGDLASLLENVGS-----------------LDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDF  137 (265)
T ss_pred             CCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEec
Confidence            999999999987654                 8999999999999999999999999999995             7899


Q ss_pred             Ccceeeecc-----------CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH-----------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++......           .....++..|+|||.+.+..++.++||.
T Consensus       138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~  185 (265)
T cd05579         138 GLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWW  185 (265)
T ss_pred             ccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhH
Confidence            988754332           1345677899999999988889999974

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.93  E-value=6.7e-25  Score=183.84  Aligned_cols=163  Identities=19%  Similarity=0.265  Sum_probs=135.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|++|.||+|...     .++..||+|+++..........+.+|+.+++.+ +|+||+++++++.+.+..++||||
T Consensus         6 ~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   79 (284)
T cd07836           6 EKLGEGTYATVYKGRNR-----TTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVFEY   79 (284)
T ss_pred             eeeccCCceEEEEEEEC-----CCCeEEEEEEecccccccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEEec
Confidence            47999999999999987     577899999997654444456678999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++ +|.+++.....              ...+++..+..++.|++.||.|||+++++|||||             ++||
T Consensus        80 ~~~-~l~~~~~~~~~--------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~  144 (284)
T cd07836          80 MDK-DLKKYMDTHGV--------------RGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADF  144 (284)
T ss_pred             CCc-cHHHHHHhcCC--------------CCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeec
Confidence            985 99999876542              1348999999999999999999999999999996             6789


Q ss_pred             CcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      |++.......   ....++..|+|||++.+ ..++.++||.
T Consensus       145 g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~  185 (284)
T cd07836         145 GLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIW  185 (284)
T ss_pred             chhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHH
Confidence            9887543321   24566889999999866 4568889874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.93  E-value=4.2e-25  Score=185.32  Aligned_cols=161  Identities=19%  Similarity=0.268  Sum_probs=134.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|+++... .....+.+.+|+++++.+ +|+||+++++++..++..+++||
T Consensus         7 ~~i~~g~~~~v~~~~~~-----~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           7 GVVGEGAYGVVLKCRNK-----ATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             EEecccCCeeEEEEEeC-----CCCcEEEEehhhhhcccccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEEEEe
Confidence            37999999999999987     567899999997532 233456789999999999 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |++++.+..++.....                 +++..+..++.||+.||.|||+++++|+|||             ++|
T Consensus        81 ~~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d  143 (288)
T cd07833          81 YVERTLLELLEASPGG-----------------LPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCD  143 (288)
T ss_pred             cCCCCHHHHHHhcCCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEe
Confidence            9998666655544333                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC----CccccccccccccccccC-CCCccccee
Q psy12228        218 FDLCILVFFHD----STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~----~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      ||++.......    ....++..|+|||++.+. .++.++||.
T Consensus       144 ~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~  186 (288)
T cd07833         144 FGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVW  186 (288)
T ss_pred             eecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHH
Confidence            99887644332    245678899999999887 889999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.93  E-value=7.5e-25  Score=184.98  Aligned_cols=161  Identities=21%  Similarity=0.273  Sum_probs=134.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ..||+|+||.||+|...     .++..||+|.++.....    .....+..|+++++.+ +|+||+++++++.+.+..++
T Consensus         6 ~~lg~g~~~~vy~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l   79 (298)
T cd07841           6 KKLGEGTYAVVYKARDK-----ETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNINL   79 (298)
T ss_pred             eeeeeccccEEEEEEEC-----CCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEEE
Confidence            37999999999999987     56789999999754322    2335577899999999 89999999999999889999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+ +|+|.+++.....                .+++..+..++.||+.||.|||+++++|+|||             
T Consensus        80 v~e~~-~~~L~~~i~~~~~----------------~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~  142 (298)
T cd07841          80 VFEFM-ETDLEKVIKDKSI----------------VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLK  142 (298)
T ss_pred             EEccc-CCCHHHHHhccCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEE
Confidence            99999 8899999976541                28999999999999999999999999999995             


Q ss_pred             ccCCCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        215 FIGFDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ++|||++.......   ....+++.|+|||.+.+ ..++.++||.
T Consensus       143 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  187 (298)
T cd07841         143 LADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMW  187 (298)
T ss_pred             EccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHH
Confidence            78999987654332   23456788999999865 4668888874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=5.3e-25  Score=198.74  Aligned_cols=165  Identities=16%  Similarity=0.162  Sum_probs=126.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEE------------------EEecCCCChHHHHHHHHHHHHHHHhcCCCcc
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAV------------------KMLKEGHSDAEMMDLVSEMEMMKMIGQHINI  132 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vav------------------K~~~~~~~~~~~~~~~~E~~~l~~l~~h~nI  132 (258)
                      ...||+|+||.||+|..+.    ..+...+.                  |.++.  .......+.+|+.+|+.+ +||||
T Consensus       153 i~~LG~G~fG~Vyl~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~Ei~il~~l-~HpnI  225 (501)
T PHA03210        153 IDDLPAGAFGKIFICALRA----STEEAEARRGVNSTNQGKPKCERLIAKRVKA--GSRAAIQLENEILALGRL-NHENI  225 (501)
T ss_pred             EeEecCCCCcceEEEEEec----cchhhhhhhccccccccchhhhhhHhHHhhc--chHHHHHHHHHHHHHHhC-CCCCc
Confidence            3479999999999998652    11111121                  21111  223446688999999999 99999


Q ss_pred             cceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy12228        133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDA  212 (258)
Q Consensus       133 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~D  212 (258)
                      +++++++...+..++++|++.+ +|.+++......            .........++.|+.||+.||.|||++||||||
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~------------~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrD  292 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFD------------WKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRD  292 (501)
T ss_pred             CcEeEEEEECCeeEEEEecccc-CHHHHHhhcccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999999999999999965 888887654310            011244677889999999999999999999999


Q ss_pred             cc-------------ccCCCcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        213 VR-------------FIGFDLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       213 lK-------------i~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||             |+|||+++......    ....||+.|+|||++.+..++.++||.
T Consensus       293 LKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  352 (501)
T PHA03210        293 IKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIW  352 (501)
T ss_pred             CCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHH
Confidence            96             78999998654332    346799999999999999999999984

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.92  E-value=1.2e-24  Score=179.63  Aligned_cols=159  Identities=25%  Similarity=0.376  Sum_probs=132.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++.+.      .+..+|+|.++....  ....+.+|+.+++.+ +||||+++++++......+++|||
T Consensus        10 ~~ig~g~~g~v~~~~~~------~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd05112          10 QEIGSGQFGLVWLGYWL------EKRKVAIKTIREGAM--SEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLVFEF   80 (256)
T ss_pred             eeecCcccceEEEEEEe------CCCeEEEEECCCCCC--CHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEEEEc
Confidence            38999999999999875      346799999875322  234688999999999 999999999999988899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..+..++.|++.|+.|||+++++|+|||             ++||
T Consensus        81 ~~~~~L~~~~~~~~~----------------~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~  144 (256)
T cd05112          81 MEHGCLSDYLRAQRG----------------KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDF  144 (256)
T ss_pred             CCCCcHHHHHHhCcc----------------CCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCC
Confidence            999999999976432                28899999999999999999999999999995             7899


Q ss_pred             CcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......    ....++..|+|||++.+..++.++||.
T Consensus       145 g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~  185 (256)
T cd05112         145 GMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVW  185 (256)
T ss_pred             cceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHH
Confidence            9887543322    122345689999999988999999974

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG4645|consensus

Probab=99.92  E-value=2.1e-26  Score=214.88  Aligned_cols=169  Identities=20%  Similarity=0.287  Sum_probs=143.0

Q ss_pred             ceeeec-cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-HHHHHHHHHHHHHHHhcCCCcccceeeeEE
Q psy12228         63 LTVTIN-SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-AEMMDLVSEMEMMKMIGQHINIINLLGVCT  140 (258)
Q Consensus        63 ~~~~~~-~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~  140 (258)
                      ..++.+ .....||.|.||.||.|...     .+|...|+|.++-+... .....+.+|..++..+ +|||+|++||+-.
T Consensus      1231 snV~~rWqrg~~Ig~G~fG~VYtavN~-----~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEv 1304 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNL-----DTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL-NHPNLVRYYGVEV 1304 (1509)
T ss_pred             ccceeeeccccccCCcceeeeEEeecC-----CccchhhhhhhhcCccccccCcchHHHHHHHHhc-cCccccccCceee
Confidence            344444 56678999999999999987     68899999999755332 3346688999999999 9999999999999


Q ss_pred             cCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------
Q psy12228        141 QDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------  214 (258)
Q Consensus       141 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------  214 (258)
                      +.+.++|.||||.+|+|.+.+...+.                 .++.....+..|++.|+.|||++||||||||      
T Consensus      1305 HRekv~IFMEyC~~GsLa~ll~~gri-----------------~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L 1367 (1509)
T KOG4645|consen 1305 HREKVYIFMEYCEGGSLASLLEHGRI-----------------EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL 1367 (1509)
T ss_pred             cHHHHHHHHHHhccCcHHHHHHhcch-----------------hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee
Confidence            99999999999999999999988665                 7888888999999999999999999999996      


Q ss_pred             -------ccCCCcceeeeccC-------CccccccccccccccccC---CCCcccce
Q psy12228        215 -------FIGFDLCILVFFHD-------STLLKTTSTIASLILRNQ---KVSVLLDL  254 (258)
Q Consensus       215 -------i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~~---~~s~~~Dv  254 (258)
                             ..|||.|.......       ....||+-|||||++.+.   ....+.||
T Consensus      1368 d~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~Di 1424 (1509)
T KOG4645|consen 1368 DFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADI 1424 (1509)
T ss_pred             ecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhh
Confidence                   67999998765542       468999999999999773   44566665

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.92  E-value=1.7e-24  Score=182.19  Aligned_cols=165  Identities=17%  Similarity=0.187  Sum_probs=135.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..||+|+||.||.+....  ...++..||+|+++...   .....+.+.+|+.++..+.+|+||+.+++++..+...++|
T Consensus         6 ~~lg~G~~g~v~~~~~~~--~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (290)
T cd05613           6 KVLGTGAYGKVFLVRKVS--GHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLI   83 (290)
T ss_pred             eeeccCCcceEEEEEecc--CCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEE
Confidence            379999999999998742  11357889999997532   1223466889999999996799999999999988899999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++++|.+++.....                 +++..+..++.|++.||.|||+++++|||||             +
T Consensus        84 ~e~~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl  146 (290)
T cd05613          84 LDYINGGELFTHLSQRER-----------------FKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVL  146 (290)
T ss_pred             EecCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEE
Confidence            999999999999987654                 8999999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccC----Ccccccccccccccccc--CCCCccccee
Q psy12228        216 IGFDLCILVFFHD----STLLKTTSTIASLILRN--QKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~--~~~s~~~Dv~  255 (258)
                      +|||++.......    ....|+..|+|||.+..  ..++.++||.
T Consensus       147 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~  192 (290)
T cd05613         147 TDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWW  192 (290)
T ss_pred             eeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHH
Confidence            8999987654322    24568899999999875  3467889974

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.92  E-value=1.7e-24  Score=182.50  Aligned_cols=166  Identities=20%  Similarity=0.260  Sum_probs=133.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc-----E
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP-----L  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~-----~  145 (258)
                      ..||+|+||.||+|...     .++..||+|.++.... ......+.+|+.+++.+.+|+||+++++++...+.     .
T Consensus         7 ~~lg~g~~g~vy~~~~~-----~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           7 EKIGEGTYGKVYKARDK-----NTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             eEecccCCeEEEEEEEC-----CCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            47999999999999987     5778999999865422 22335688999999999667999999999987665     8


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +++|||+++ +|.+++......            +...+++..++.++.||+.||.|||+++|+|||||           
T Consensus        82 ~lv~e~~~~-~l~~~~~~~~~~------------~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~  148 (295)
T cd07837          82 YLVFEYLDS-DLKKFMDSNGRG------------PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG  148 (295)
T ss_pred             EEEeeccCc-CHHHHHHHhccc------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCC
Confidence            999999986 899998765420            12358999999999999999999999999999995           


Q ss_pred             ---ccCCCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                         ++|||++.......   ....+++.|+|||++.+ ..++.++||.
T Consensus       149 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~  196 (295)
T cd07837         149 LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIW  196 (295)
T ss_pred             eEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHH
Confidence               67899887543221   23356788999998865 4578999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.7e-24  Score=176.09  Aligned_cols=161  Identities=22%  Similarity=0.382  Sum_probs=140.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|++|.||++...     .++..|++|.+.... .....+.+.+|+++++.+ +|+|++++++++.+.+..+++||
T Consensus         6 ~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e   79 (254)
T cd06627           6 DLIGRGAFGVVYKGLNL-----ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIILE   79 (254)
T ss_pred             eEEcccCCeEEEEEEEc-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEEe
Confidence            48999999999999886     567889999997643 224567899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....                 +++..+..++.|++.||.|||++|++|+|||             ++|
T Consensus        80 ~~~~~~L~~~~~~~~~-----------------l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d  142 (254)
T cd06627          80 YAENGSLRQIIKKFGP-----------------FPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLAD  142 (254)
T ss_pred             cCCCCcHHHHHHhccC-----------------CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEec
Confidence            9999999999987654                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......   ....++..|+|||.+.+..++.++||.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~  183 (254)
T cd06627         143 FGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIW  183 (254)
T ss_pred             cccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHH
Confidence            99888654433   245788899999999888889999975

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.92  E-value=1.8e-24  Score=186.03  Aligned_cols=159  Identities=19%  Similarity=0.302  Sum_probs=131.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-----cEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-----PLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-----~~~  146 (258)
                      ..||+|+||.||+|...     .++..||+|+++..........+.+|+.+++.+ +|+||+++++++....     ..+
T Consensus        11 ~~lg~G~~g~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~   84 (336)
T cd07849          11 SYIGEGAYGMVCSATHK-----PTGVKVAIKKISPFEHQTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFESFNDVY   84 (336)
T ss_pred             EEEEecCCeEEEEEEEc-----CCCCeEEEEEecccccchhHHHHHHHHHHHHhC-CCCCcCchhheeecccccccceEE
Confidence            38999999999999987     577899999997543344456788999999999 8999999999876543     479


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +++||+.+ +|.+++...                  .+++..+..++.|++.||.|||+++|+|||||            
T Consensus        85 lv~e~~~~-~l~~~~~~~------------------~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~  145 (336)
T cd07849          85 IVQELMET-DLYKLIKTQ------------------HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDL  145 (336)
T ss_pred             EEehhccc-CHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCE
Confidence            99999975 888887543                  28999999999999999999999999999995            


Q ss_pred             -ccCCCcceeeeccC------Ccccccccccccccccc-CCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD------STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                       ++|||++.......      ....+++.|+|||.+.+ ..++.++||.
T Consensus       146 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw  194 (336)
T cd07849         146 KICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIW  194 (336)
T ss_pred             EECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHH
Confidence             78999987643221      23577899999998755 5689999984

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.3e-24  Score=178.37  Aligned_cols=164  Identities=20%  Similarity=0.295  Sum_probs=134.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------cE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------PL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------~~  145 (258)
                      ..||+|++|.||+|...     .++..+++|++....  ...+.+.+|+.+++++..|+||+++++++....      ..
T Consensus        12 ~~l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608          12 EVIGEGTYGKVYKARHK-----KTGQLVAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             eeecCCCCeEEEEEEEC-----CCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            38999999999999987     467899999997642  234678999999999867999999999997644      48


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +++|||+++++|.+++.....             ....+++..+..++.|++.||.|||+++++|+||+           
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~  151 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRK-------------KGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAE  151 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhh-------------cCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCe
Confidence            999999999999999876431             01348999999999999999999999999999984           


Q ss_pred             --ccCCCcceeeecc---CCcccccccccccccccc-----CCCCccccee
Q psy12228        215 --FIGFDLCILVFFH---DSTLLKTTSTIASLILRN-----QKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~s~~~Dv~  255 (258)
                        ++|||++......   .....++..|+|||++..     ..++.++||.
T Consensus       152 ~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~  202 (275)
T cd06608         152 VKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVW  202 (275)
T ss_pred             EEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHH
Confidence              7899988754332   235678899999999854     3567889974

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.92  E-value=7.9e-25  Score=212.01  Aligned_cols=155  Identities=22%  Similarity=0.254  Sum_probs=127.2

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ....+||+|+||.||+|...     .++..||||.++.....     ...|++.++++ +|||||+++|+|.+.+..++|
T Consensus       693 ~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~-----~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~lv  761 (968)
T PLN00113        693 KEENVISRGKKGASYKGKSI-----KNGMQFVVKEINDVNSI-----PSSEIADMGKL-QHPNIVKLIGLCRSEKGAYLI  761 (968)
T ss_pred             CcccEEccCCCeeEEEEEEC-----CCCcEEEEEEccCCccc-----cHHHHHHHhhC-CCCCcceEEEEEEcCCCCEEE
Confidence            34568999999999999986     57789999999753221     12468889999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh---hCCccccCccccCC-------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQ---SRKVGNDAVRFIGF-------  218 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~iiH~DlKi~df-------  218 (258)
                      |||+++|+|.++++.                    ++|..+..++.|++.||+|||   +.+|+|||||..++       
T Consensus       762 ~Ey~~~g~L~~~l~~--------------------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~  821 (968)
T PLN00113        762 HEYIEGKNLSEVLRN--------------------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE  821 (968)
T ss_pred             EeCCCCCcHHHHHhc--------------------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCc
Confidence            999999999999963                    789999999999999999999   66999999995432       


Q ss_pred             -----CcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        219 -----DLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 -----gl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                           |..... .......+|+.|+|||++.+..+++++||.
T Consensus       822 ~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~  862 (968)
T PLN00113        822 PHLRLSLPGLL-CTDTKCFISSAYVAPETRETKDITEKSDIY  862 (968)
T ss_pred             eEEEecccccc-ccCCCccccccccCcccccCCCCCcccchh
Confidence                 211111 112344678999999999999999999985

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.92  E-value=2.3e-24  Score=181.03  Aligned_cols=162  Identities=19%  Similarity=0.273  Sum_probs=138.5

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ....||+|++|.||+|...     .++..|++|+++....  ..+.+.+|++.++.+ +|+||+++++++...+..++++
T Consensus        23 ~~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          23 NLEKIGEGASGEVYKATDR-----ATGKEVAIKKMRLRKQ--NKELIINEILIMKDC-KHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             HhHhccCCCCeEEEEEEEc-----cCCcEEEEEEEecCch--hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEEEEEE
Confidence            3347999999999999987     4678999999976423  456788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++.....                .+++..+..++.|++.||.|||+.|++|+|||             ++
T Consensus        95 e~~~~~~L~~~l~~~~~----------------~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~  158 (286)
T cd06614          95 EYMDGGSLTDIITQNFV----------------RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLA  158 (286)
T ss_pred             eccCCCcHHHHHHHhcc----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEEC
Confidence            99999999999988651                28999999999999999999999999999995             67


Q ss_pred             CCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......   ....++..|+|||++.+..++.++||.
T Consensus       159 d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~  200 (286)
T cd06614         159 DFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIW  200 (286)
T ss_pred             ccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccH
Confidence            888776433221   344678899999999998999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.92  E-value=2.8e-24  Score=182.46  Aligned_cols=161  Identities=19%  Similarity=0.300  Sum_probs=134.0

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...||+|+||.||+|...     .++..||+|++....  .......+.+|+.+++.+ +||||+++++++.+.+..++|
T Consensus        20 ~~~lg~g~~g~vy~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          20 LREIGHGSFGAVYFARDV-----RTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             heeecCCCCeEEEEEEEc-----CCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEEEE
Confidence            347999999999999987     567899999986432  334456789999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      +||++ |+|.+++.....                .+++..+..++.|++.||.|||+++++|+||+             +
T Consensus        94 ~e~~~-g~l~~~~~~~~~----------------~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL  156 (307)
T cd06607          94 MEYCL-GSASDILEVHKK----------------PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKL  156 (307)
T ss_pred             HHhhC-CCHHHHHHHccc----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEE
Confidence            99998 588887765432                38999999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccCCccccccccccccccc---cCCCCccccee
Q psy12228        216 IGFDLCILVFFHDSTLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                      +|||++.... ......+++.|+|||++.   ...++.++||.
T Consensus       157 ~dfg~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~  198 (307)
T cd06607         157 ADFGSASLVS-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVW  198 (307)
T ss_pred             eecCcceecC-CCCCccCCccccCceeeeccCCCCCCcccchH
Confidence            8999887533 234567889999999984   45688899985

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.92  E-value=2.7e-24  Score=177.89  Aligned_cols=165  Identities=18%  Similarity=0.236  Sum_probs=137.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCC-CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv  148 (258)
                      ..||.|+||.||++...     .++..||+|++... ......+.+..|+.+++.+ +|+||+++++++..  ....+++
T Consensus         6 ~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~~   79 (265)
T cd08217           6 ETIGKGSFGTVRKVRRK-----SDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLYIV   79 (265)
T ss_pred             eeeccCCCeEEEEeeec-----CCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEEEE
Confidence            37899999999999987     57789999999643 2445567799999999999 99999999998864  3468999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-----hCCccccCcc---------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQ-----SRKVGNDAVR---------  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH-----~~~iiH~DlK---------  214 (258)
                      |||+++++|.+++.....             ....+++..++.++.||+.||.|||     +.+++|+|||         
T Consensus        80 ~e~~~~~~L~~~l~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~  146 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKK-------------ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN  146 (265)
T ss_pred             ehhccCCCHHHHHHHHhh-------------cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC
Confidence            999999999999987532             1234899999999999999999999     9999999984         


Q ss_pred             ----ccCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||++.......   ....+++.|+|||++.+..++.++||.
T Consensus       147 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~  194 (265)
T cd08217         147 NNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIW  194 (265)
T ss_pred             CCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHH
Confidence                78999888654332   345788999999999998899999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.92  E-value=3e-24  Score=185.84  Aligned_cols=158  Identities=22%  Similarity=0.226  Sum_probs=132.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC------Cc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD------GP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~------~~  144 (258)
                      ..||+|+||.||+|...     .++..||+|.+.... .......+.+|+.+++.+ +|+||+++++++...      ..
T Consensus        22 ~~lg~g~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~   95 (353)
T cd07850          22 KPIGSGAQGIVCAAYDT-----VTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLEEFQD   95 (353)
T ss_pred             EEeccCCCEEEEEEEEC-----CCCCEEEEEecCccccChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCccccCc
Confidence            37999999999999987     578899999986432 334456688999999999 999999999998643      25


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++||||+.+ +|.+.+...                   +++..+..++.|++.||.|||++||+|||||          
T Consensus        96 ~~lv~e~~~~-~l~~~~~~~-------------------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~  155 (353)
T cd07850          96 VYLVMELMDA-NLCQVIQMD-------------------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  155 (353)
T ss_pred             EEEEEeccCC-CHHHHHhhc-------------------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence            7999999975 898887542                   7889999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++......  ....+++.|+|||++.+..++.++||.
T Consensus       156 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  201 (353)
T cd07850         156 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW  201 (353)
T ss_pred             CEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhH
Confidence               78999998654332  345678899999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.92  E-value=2.8e-24  Score=179.79  Aligned_cols=162  Identities=19%  Similarity=0.273  Sum_probs=132.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|.++............+|+.++.++.+|+||+++++++.++  +..++||
T Consensus         5 ~~lg~g~~~~v~~~~~~-----~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~   79 (282)
T cd07831           5 GKIGEGTFSEVLKAQSR-----KTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF   79 (282)
T ss_pred             eeccccccceEEEEEEc-----CCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence            37899999999999987     5778999999976433333344568999999985699999999999987  8899999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------ccC
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------FIG  217 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------i~d  217 (258)
                      ||++ |+|.+++.....                .+++..+..++.|++.||.|||+++++|||||            ++|
T Consensus        80 e~~~-~~l~~~l~~~~~----------------~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~d  142 (282)
T cd07831          80 ELMD-MNLYELIKGRKR----------------PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLAD  142 (282)
T ss_pred             ecCC-ccHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEe
Confidence            9997 489888876432                38999999999999999999999999999996            778


Q ss_pred             CCcceeeeccC--Ccccccccccccccccc-CCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ||++.......  ....++..|+|||++.. ..++.++||.
T Consensus       143 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  183 (282)
T cd07831         143 FGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIW  183 (282)
T ss_pred             cccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHH
Confidence            99887543322  34567899999998754 5568899974

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.92  E-value=2e-24  Score=182.08  Aligned_cols=162  Identities=20%  Similarity=0.252  Sum_probs=132.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|.+|.||+|...     .++..||+|.+.... .....+.+.+|+.+++.+ +||||+++++++.+++..++|||
T Consensus         8 ~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          8 EKIGEGTYGVVYKARDR-----VTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             EEecCCCCEEEEEEEec-----CCCcEEEEEehhhccccccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEEEe
Confidence            37899999999999987     577899999986532 223346688999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------cc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------FI  216 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i~  216 (258)
                      |++ ++|.+++.....               ..+++..+..++.||+.||.|||+++++|+|||              ++
T Consensus        82 ~~~-~~l~~~~~~~~~---------------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~  145 (294)
T PLN00009         82 YLD-LDLKKHMDSSPD---------------FAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLA  145 (294)
T ss_pred             ccc-ccHHHHHHhCCC---------------CCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEc
Confidence            997 489888865443               236888999999999999999999999999985              67


Q ss_pred             CCCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      |||++.......   ....+++.|+|||++.+ ..++.++||.
T Consensus       146 dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~  188 (294)
T PLN00009        146 DFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIW  188 (294)
T ss_pred             ccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHH
Confidence            888887543221   23456789999999876 4578899975

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.92  E-value=2.6e-24  Score=184.51  Aligned_cols=162  Identities=22%  Similarity=0.257  Sum_probs=133.1

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-CCcEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLY  146 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-~~~~~  146 (258)
                      .....||+|+||.||++...     .++..||+|++.... .....+.+.+|+.+++.+ +||||+++++++.. ....+
T Consensus        13 ~~~~~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856          13 VDLQPVGMGAFGLVCSARDQ-----LTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             EEEEeecccCCeEEEEEEEC-----CCCCEEEEEEecccccccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCcEE
Confidence            33458999999999999987     578899999886432 333456788999999999 99999999999875 45789


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +++||+. ++|.++++...                  +++..+..++.|++.||.|||+++|+|||||            
T Consensus        87 lv~e~~~-~~L~~~~~~~~------------------~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~  147 (328)
T cd07856          87 FVTELLG-TDLHRLLTSRP------------------LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDL  147 (328)
T ss_pred             EEeehhc-cCHHHHHhcCC------------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCE
Confidence            9999985 59988876432                  7888899999999999999999999999985            


Q ss_pred             -ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 -FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                       ++|||++...........++..|+|||.+.+ ..++.++||.
T Consensus       148 ~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  190 (328)
T cd07856         148 KICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIW  190 (328)
T ss_pred             EeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHH
Confidence             7899998765444455677889999999866 5789999974

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.92  E-value=3.5e-24  Score=181.63  Aligned_cols=162  Identities=18%  Similarity=0.317  Sum_probs=130.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------  143 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------  143 (258)
                      ...||+|+||.||+|...     .++..||||.+.... .......+.+|+.+++++ +||||+++++++...+      
T Consensus        17 ~~~lg~g~~~~v~~~~~~-----~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          17 LAKIGQGTFGEVFKARHK-----KTKQIVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             EEEeecCCCEEEEEEEEC-----CCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC-CCCCccceEEEEecccccccCC
Confidence            348999999999999987     578999999986432 222234567899999999 9999999999987654      


Q ss_pred             --cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------
Q psy12228        144 --PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------  214 (258)
Q Consensus       144 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------  214 (258)
                        ..++||||+.+ +|.+++.....                .+++..+..++.||+.||.|||+++++|+|||       
T Consensus        91 ~~~~~lv~e~~~~-~l~~~l~~~~~----------------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~  153 (310)
T cd07865          91 KGSFYLVFEFCEH-DLAGLLSNKNV----------------KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT  153 (310)
T ss_pred             CceEEEEEcCCCc-CHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC
Confidence              35999999975 89888876432                38999999999999999999999999999995       


Q ss_pred             ------ccCCCcceeeeccC-------CccccccccccccccccC-CCCccccee
Q psy12228        215 ------FIGFDLCILVFFHD-------STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 ------i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                            ++|||++.......       ....++..|+|||++.+. .++.++||.
T Consensus       154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  208 (310)
T cd07865         154 KDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMW  208 (310)
T ss_pred             CCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhH
Confidence                  78999987553322       234567889999998664 468899974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.92  E-value=1.8e-24  Score=181.37  Aligned_cols=162  Identities=21%  Similarity=0.261  Sum_probs=133.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|++|.||+|...     .++..||||.++.... ......+.+|+++++++ +||||+++++++.+++..+++||
T Consensus         6 ~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e   79 (284)
T cd07860           6 EKIGEGTYGVVYKARNK-----LTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFE   79 (284)
T ss_pred             eeecCCCceEEEEEEEC-----CCCCEEEEEEccccccccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEee
Confidence            37899999999999987     5778999999975432 22335788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+. ++|..++.....               ..+++..+..++.|++.||+|||+++++|+|||             ++|
T Consensus        80 ~~~-~~l~~~~~~~~~---------------~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~d  143 (284)
T cd07860          80 FLH-QDLKKFMDASPL---------------SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLAD  143 (284)
T ss_pred             ccc-cCHHHHHHhCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEee
Confidence            996 589999876432               348999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCC-CCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQK-VSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~-~s~~~Dv~  255 (258)
                      ||++.......   ....+++.|+|||++.+.. ++.++||.
T Consensus       144 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  185 (284)
T cd07860         144 FGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW  185 (284)
T ss_pred             ccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHH
Confidence            99887543322   2345678999999987644 58888874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.92  E-value=1.9e-24  Score=181.63  Aligned_cols=166  Identities=17%  Similarity=0.175  Sum_probs=133.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++...     .++..||+|.+...........+.+|+.++.++..|+||+++++++..++..+++|||
T Consensus        10 ~~lg~G~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616          10 GEIGRGAFGTVNKMLHK-----PSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HHhCCCCceEEEEEEEC-----CCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            37999999999999987     5779999999976544455677899999999995599999999999998899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~d  217 (258)
                      +.. +|.++.......            ....+++..+..++.|++.||+|||+. +++|||||             ++|
T Consensus        85 ~~~-~l~~l~~~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~d  151 (288)
T cd06616          85 MDI-SLDKFYKYVYEV------------LKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCD  151 (288)
T ss_pred             ccC-CHHHHHHHHHHh------------hcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEee
Confidence            875 665544321000            012389999999999999999999975 99999995             789


Q ss_pred             CCcceeeecc--CCccccccccccccccccC---CCCccccee
Q psy12228        218 FDLCILVFFH--DSTLLKTTSTIASLILRNQ---KVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~s~~~Dv~  255 (258)
                      ||+++.....  .....++..|+|||++.+.   .++.++||.
T Consensus       152 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~  194 (288)
T cd06616         152 FGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVW  194 (288)
T ss_pred             cchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhh
Confidence            9998754332  2345788999999999876   689999985

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.92  E-value=9.2e-24  Score=173.77  Aligned_cols=161  Identities=20%  Similarity=0.311  Sum_probs=140.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv  148 (258)
                      ..||+|++|.||+|...     .++..|++|++..... ....+.+.+|+.+++++ +|+||+++++.+...  ...+++
T Consensus         6 ~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv   79 (260)
T cd06606           6 ELLGRGSFGSVYLALDK-----DTGELMAVKSVELSGDSEEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLNIF   79 (260)
T ss_pred             eEeeecCceEEEEEEEC-----CCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEEEE
Confidence            48999999999999987     5778999999975432 34567899999999999 899999999999988  789999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      +||+++++|.+++.....                 +++..+..++.|++.||.|||+.+++|+||+             +
T Consensus        80 ~e~~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l  142 (260)
T cd06606          80 LEYVSGGSLSSLLKKFGK-----------------LPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKL  142 (260)
T ss_pred             EEecCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEE
Confidence            999999999999987654                 8999999999999999999999999999994             7


Q ss_pred             cCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||.+.......     ....++..|+|||.+.+..++.++||.
T Consensus       143 ~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~  187 (260)
T cd06606         143 ADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIW  187 (260)
T ss_pred             cccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHH
Confidence            8999988655442     356788899999999988899999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.92  E-value=2.3e-24  Score=181.66  Aligned_cols=161  Identities=18%  Similarity=0.241  Sum_probs=133.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv  148 (258)
                      ..||+|+||.||+|...     .++..+|+|.++.... ......+.+|+.+++.+ +||||+++++++...  +..++|
T Consensus        11 ~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843          11 NRIEEGTYGVVYRARDK-----KTGEIVALKKLKMEKEKEGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhcCCCCeEEEEEEEC-----CCCcEEEEEEEeeccccccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcEEEE
Confidence            47999999999999987     5678999999975422 22334577899999999 899999999999877  789999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++ +|.+++.....                .+++..++.++.||+.||.|||+++++|+|||             +
T Consensus        85 ~e~~~~-~L~~~~~~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l  147 (293)
T cd07843          85 MEYVEH-DLKSLMETMKQ----------------PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKI  147 (293)
T ss_pred             ehhcCc-CHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEE
Confidence            999985 99999876432                38999999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccC---CccccccccccccccccC-CCCccccee
Q psy12228        216 IGFDLCILVFFHD---STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      +|||++.......   ....+++.|+|||.+.+. .++.++||.
T Consensus       148 ~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~  191 (293)
T cd07843         148 CDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMW  191 (293)
T ss_pred             eecCceeeccCCccccccccccccccCchhhcCCccccchhhHH
Confidence            8999988654432   345678899999998764 458889974

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0614|consensus

Probab=99.92  E-value=1.2e-26  Score=198.71  Aligned_cols=159  Identities=19%  Similarity=0.220  Sum_probs=142.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCC--CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||-|+||.|-++..++     ....+|+|++++.  .+..+.+.+..|-.+|..+ +.|.||++|..|.++.++|++||
T Consensus       427 TLGvGgFGRVELV~~~~-----~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  427 TLGVGGFGRVELVKVNS-----QKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hcccCccceEEEEEecc-----cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhccchhhhhhHH
Confidence            68999999999999872     3335899999753  2556668899999999999 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      -|-||.|+..|++.+.                 ++......++..++.|++|||++|||.||||             +.|
T Consensus       501 aClGGElWTiLrdRg~-----------------Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVD  563 (732)
T KOG0614|consen  501 ACLGGELWTILRDRGS-----------------FDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVD  563 (732)
T ss_pred             hhcCchhhhhhhhcCC-----------------cccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEee
Confidence            9999999999999887                 9999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC--CccccccccccccccccCCCCcccce
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      ||+|+....+.  -+++|||.|.|||++.++.++.++|.
T Consensus       564 FGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDy  602 (732)
T KOG0614|consen  564 FGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDY  602 (732)
T ss_pred             hhhHHHhccCCceeeecCCcccccchhhhccCcchhhHH
Confidence            99999876665  58999999999999999999999984

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.92  E-value=3.1e-24  Score=185.14  Aligned_cols=159  Identities=21%  Similarity=0.293  Sum_probs=131.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------c
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------P  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------~  144 (258)
                      ..||+|+||.||++...     .++..||||.+.... .......+.+|+.+++.+ +||||+++++++..+.      .
T Consensus        21 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07880          21 KQVGSGAYGTVCSALDR-----RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLDRFHD   94 (343)
T ss_pred             EEeeecCCeEEEEEEEC-----CCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCccccccce
Confidence            37999999999999987     577899999986432 233446788999999999 9999999999987654      3


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++||||+ +++|.+++... .                 +++..+..++.|++.||.|||++||+|||||          
T Consensus        95 ~~lv~e~~-~~~l~~~~~~~-~-----------------l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~  155 (343)
T cd07880          95 FYLVMPFM-GTDLGKLMKHE-K-----------------LSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC  155 (343)
T ss_pred             EEEEEecC-CCCHHHHHhcC-C-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            58999999 56998887642 2                 8999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                         ++|||++...........+++.|+|||++.+ ..++.++||.
T Consensus       156 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  200 (343)
T cd07880         156 ELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIW  200 (343)
T ss_pred             CEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHH
Confidence               7899998865544455678899999999876 4578888874

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.92  E-value=5.5e-24  Score=197.94  Aligned_cols=151  Identities=17%  Similarity=0.252  Sum_probs=130.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||+|...     .+++.||||+++...  .......+..|+.++..+ +||||+++++++...+.++|||
T Consensus        10 ~~LG~G~fg~Vy~a~~~-----~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610          10 KPISRGAFGKVYLGRKK-----NNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             EEEecCCCeEEEEEEEC-----CCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEEEE
Confidence            38999999999999987     577899999997432  334456788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+.+++|.+++.....                 +++..++.|+.||+.||.|||+++|||||||             |+
T Consensus        84 Ey~~g~~L~~li~~~~~-----------------l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~  146 (669)
T cd05610          84 EYLIGGDVKSLLHIYGY-----------------FDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLT  146 (669)
T ss_pred             eCCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEE
Confidence            99999999999987654                 8999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC---Ccccccccccccccccc
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRN  245 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~  245 (258)
                      |||+++......   ....+|+.|++||....
T Consensus       147 DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~  178 (669)
T cd05610         147 DFGLSKVTLNRELNMMDILTTPSMAKPKNDYS  178 (669)
T ss_pred             eCCCCccccCCcccccccccCccccCcccccc
Confidence            999998654332   45688999999997544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.92  E-value=2.3e-24  Score=176.51  Aligned_cols=150  Identities=13%  Similarity=0.061  Sum_probs=126.2

Q ss_pred             cCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeCCCCC
Q psy12228         77 CAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN  156 (258)
Q Consensus        77 G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~~g~  156 (258)
                      |.||.||++...     .++..+|+|.++...      .+.+|...+... .||||+++++++.+.+..+++|||+++|+
T Consensus         4 g~~~~v~~~~~~-----~~~~~~~~K~i~~~~------~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   71 (237)
T cd05576           4 GVIDKVLLVMDT-----RTQQTFILKGLRKSS------EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGK   71 (237)
T ss_pred             cccceEEEEEEc-----cCCcEEEEEeecchh------hhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCC
Confidence            889999999987     678999999997531      133455555566 79999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCccee
Q psy12228        157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCIL  223 (258)
Q Consensus       157 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~  223 (258)
                      |.+++.....                 +++..+..++.|++.||.|||+++|+|||||             ++|||++..
T Consensus        72 L~~~l~~~~~-----------------l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~  134 (237)
T cd05576          72 LWSHISKFLN-----------------IPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSE  134 (237)
T ss_pred             HHHHHHHhcC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhc
Confidence            9999987654                 8999999999999999999999999999997             578887765


Q ss_pred             eeccCCccccccccccccccccCCCCccccee
Q psy12228        224 VFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       224 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      .........++..|+|||++.+..++.++||.
T Consensus       135 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  166 (237)
T cd05576         135 VEDSCDGEAVENMYCAPEVGGISEETEACDWW  166 (237)
T ss_pred             cccccccCCcCccccCCcccCCCCCCchhhHH
Confidence            44433455667789999999888899999974

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.7e-24  Score=176.72  Aligned_cols=159  Identities=23%  Similarity=0.298  Sum_probs=137.9

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ||+|+||.||++...     .++..+|+|+++....  ......+..|+.+++.+ +|+||+++++.+..++..+++|||
T Consensus         1 lg~G~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~   74 (250)
T cd05123           1 LGKGSFGKVLLVRKK-----DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLYLVLEY   74 (250)
T ss_pred             CCCCCceEEEEEEEC-----CCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeEEEEec
Confidence            689999999999987     4678999999975432  23456789999999999 899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....                 +++..+..++.|++.||.|||+.+++|+|||             ++||
T Consensus        75 ~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~  137 (250)
T cd05123          75 APGGELFSHLSKEGR-----------------FSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDF  137 (250)
T ss_pred             CCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeec
Confidence            999999999987654                 8999999999999999999999999999995             6899


Q ss_pred             Ccceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++......   .....++..|+|||.+.+...+.++|+.
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~  177 (250)
T cd05123         138 GLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWW  177 (250)
T ss_pred             CcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHH
Confidence            988765443   3456788999999999988889999975

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.92  E-value=7.2e-24  Score=174.49  Aligned_cols=165  Identities=21%  Similarity=0.336  Sum_probs=140.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||++...     .++..||+|++.... .......+.+|+++++.+ +|+|++++++.+...+..++++|
T Consensus         6 ~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~lv~e   79 (258)
T cd08215           6 KQIGKGSFGKVYLVRRK-----SDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCIVME   79 (258)
T ss_pred             eeeccCCCeEEEEEEEc-----CCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEEEEE
Confidence            37899999999999987     567899999997543 234567789999999999 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....             ....+++..+..++.+++.||.|||+++++|+||+             ++|
T Consensus        80 ~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d  146 (258)
T cd08215          80 YADGGDLSQKIKKQKK-------------EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGD  146 (258)
T ss_pred             ecCCCcHHHHHHHhhc-------------cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECC
Confidence            9999999999987531             11348999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......   ....+++.|+|||.+.+..++.++||.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~  187 (258)
T cd08215         147 FGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIW  187 (258)
T ss_pred             ccceeecccCcceecceeeeecccChhHhccCCCCccccHH
Confidence            99887644332   345788899999999998899999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.92  E-value=3.4e-24  Score=182.22  Aligned_cols=167  Identities=19%  Similarity=0.269  Sum_probs=133.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYV  147 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~l  147 (258)
                      ..||+|+||.||+|.....   .++..||+|.+....  .....+.+.+|+.+++.+ +||||+++++++.+.  ..+++
T Consensus         6 ~~ig~g~~g~v~~~~~~~~---~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           6 GCIGRGTYGRVYKAKRKNG---KDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             EEeccCCcEEEEEEEecCC---CCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceEEE
Confidence            3799999999999998720   167899999997632  123345678899999999 999999999999987  78999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+++ +|.+++......            ....+++..+..++.|++.||.|||+++|+|||||             
T Consensus        82 v~e~~~~-~l~~~~~~~~~~------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~  148 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHRQA------------KRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPER  148 (316)
T ss_pred             EEeCCCc-CHHHHHHhhccC------------CCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCcc
Confidence            9999986 888887654321            11248999999999999999999999999999995             


Q ss_pred             ----ccCCCcceeeecc------CCcccccccccccccccc-CCCCccccee
Q psy12228        215 ----FIGFDLCILVFFH------DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                          ++|||++......      .....++..|+|||++.+ ..++.++||.
T Consensus       149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  200 (316)
T cd07842         149 GVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIW  200 (316)
T ss_pred             ceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHH
Confidence                6789988754322      134567889999998876 4578899974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.92  E-value=7e-24  Score=180.94  Aligned_cols=160  Identities=18%  Similarity=0.291  Sum_probs=133.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..||+|.+....  .......+.+|+.+++.+ +|||++++++++.++...++||
T Consensus        31 ~~lg~G~~~~v~~~~~~-----~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          31 REIGHGSFGAVYFARDV-----RTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             heeccCCCeEEEEEEEc-----CCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeEEEEE
Confidence            37999999999999987     567899999986432  333456789999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++ +|.+.+.....                .+++.++..++.|++.||.|||+++|+|||||             ++
T Consensus       105 e~~~g-~l~~~~~~~~~----------------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~  167 (317)
T cd06635         105 EYCLG-SASDLLEVHKK----------------PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLA  167 (317)
T ss_pred             eCCCC-CHHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEe
Confidence            99975 88888765432                38999999999999999999999999999985             78


Q ss_pred             CCCcceeeeccCCccccccccccccccc---cCCCCccccee
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                      |||++.... ......+++.|+|||++.   ...++.++||.
T Consensus       168 dfg~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~  208 (317)
T cd06635         168 DFGSASIAS-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVW  208 (317)
T ss_pred             cCCCccccC-CcccccCCccccChhhhhcCCCCCCCccccHH
Confidence            999886432 234567889999999974   45688899974

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=3.6e-24  Score=179.37  Aligned_cols=162  Identities=21%  Similarity=0.273  Sum_probs=134.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcC-CCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ-HINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|++|.||+|...     .++..||+|.+.............+|+..++++ + |+||+++++++.+++..++|||
T Consensus         5 ~~ig~g~~g~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~h~~i~~~~~~~~~~~~~~lv~e   78 (283)
T cd07830           5 KQLGDGTFGSVYLARNK-----ETGELVAIKKMKKKFYSWEECMNLREVKSLRKL-NEHPNIVKLKEVFRENDELYFVFE   78 (283)
T ss_pred             eeeccCCceEEEEEEEC-----CCCcEEEEEEehhhccchhHHHHHHHHHHHHhc-cCCCCchhHHHHhhcCCcEEEEEe
Confidence            37999999999999987     467899999987543333334456799999999 6 9999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+ +|+|.+++.....               ..+++..+..++.|++.||.|||+++++|+|||             ++|
T Consensus        79 ~~-~~~l~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d  142 (283)
T cd07830          79 YM-EGNLYQLMKDRKG---------------KPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIAD  142 (283)
T ss_pred             cC-CCCHHHHHHhccc---------------ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEee
Confidence            99 7799999987542               238999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC--Ccccccccccccccccc-CCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ||++.......  ....++..|+|||++.. ..++.++||.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~  183 (283)
T cd07830         143 FGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIW  183 (283)
T ss_pred             cccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchh
Confidence            99987654332  34567889999998854 5578899975

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.92  E-value=7.6e-24  Score=173.59  Aligned_cols=161  Identities=22%  Similarity=0.372  Sum_probs=140.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|++|.||++...     .++..+++|++..... .....+.+|+.+++.+ +|+||+++++++..++..++++||
T Consensus         6 ~~l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l~~e~   78 (253)
T cd05122           6 EKIGKGGFGEVYKARHK-----RTGKEVAIKVIKLESK-EKKEKIINEIQILKKC-KHPNIVKYYGSYLKKDELWIVMEF   78 (253)
T ss_pred             eeeccCCceEEEEEEEC-----CCCcEEEEEEecccch-hHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEec
Confidence            47999999999999987     4678999999976533 4567899999999999 899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....                .+++..+..++.|++.||.|||+++++|+||+             ++||
T Consensus        79 ~~~~~L~~~~~~~~~----------------~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~  142 (253)
T cd05122          79 CSGGSLKDLLKSTNQ----------------TLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDF  142 (253)
T ss_pred             CCCCcHHHHHhhcCC----------------CCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeec
Confidence            999999999987531                28999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......  ....++..|+|||.+.+..++.++||.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~  181 (253)
T cd05122         143 GLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIW  181 (253)
T ss_pred             cccccccccccccceecCCcccCHHHHcCCCCCccccHH
Confidence            9888665543  567788999999999988889999975

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.92  E-value=3.6e-24  Score=180.06  Aligned_cols=165  Identities=16%  Similarity=0.210  Sum_probs=135.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..||+|+||.||++...+  ...++..||||+++...   .....+.+.+|+.++.++.+||||+++++.+..+...++|
T Consensus         6 ~~ig~G~~~~vy~~~~~~--~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   83 (288)
T cd05583           6 RVLGTGAYGKVFLVRKVG--GHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLI   83 (288)
T ss_pred             EEeccCCCceEEEEEEec--cccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEE
Confidence            379999999999998642  11356789999997432   1223456889999999996799999999999988899999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++.....                 +++..+..++.|++.||.|||+.+++|||||             +
T Consensus        84 ~e~~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l  146 (288)
T cd05583          84 LDYVNGGELFTHLYQREH-----------------FTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVL  146 (288)
T ss_pred             EecCCCCcHHHHHhhcCC-----------------cCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEE
Confidence            999999999999986544                 8999999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccC----CccccccccccccccccCC--CCccccee
Q psy12228        216 IGFDLCILVFFHD----STLLKTTSTIASLILRNQK--VSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~--~s~~~Dv~  255 (258)
                      +|||+++......    ....++..|+|||.+.+..  .+.++||.
T Consensus       147 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~  192 (288)
T cd05583         147 TDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWW  192 (288)
T ss_pred             EECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhH
Confidence            8999887643332    2356889999999987755  68889975

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.92  E-value=2.7e-24  Score=179.46  Aligned_cols=161  Identities=20%  Similarity=0.333  Sum_probs=137.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcC-CCcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQ-HINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~-h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..||+|+||.||++...     .++..||+|++....  .......+.+|+.+++++ . |+||+++++++..++..+++
T Consensus         7 ~~lg~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           7 KIIGEGSFSTVVLAKEK-----ETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRL-NGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             eeecCCCceEEEEEEEc-----CCCCEEEEEEechHhccchHHHHHHHHHHHHHHhc-ccCCCchhHHHHhcCCceEEEE
Confidence            37999999999999987     577899999996522  234446788999999999 6 99999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      ||++++++|.+++.....                 +++..+..++.|++.||.|||+++++|+|||             +
T Consensus        81 ~e~~~~~~L~~~l~~~~~-----------------l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l  143 (280)
T cd05581          81 LEYAPNGELLQYIRKYGS-----------------LDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKI  143 (280)
T ss_pred             EcCCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEe
Confidence            999999999999987654                 9999999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccC-----------------------CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD-----------------------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~-----------------------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||++.......                       ....++..|+|||++.+..++.++||.
T Consensus       144 ~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~  206 (280)
T cd05581         144 TDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLW  206 (280)
T ss_pred             cCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHH
Confidence            8999887543221                       234577899999999988889999974

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.92  E-value=2.3e-24  Score=178.47  Aligned_cols=165  Identities=19%  Similarity=0.276  Sum_probs=132.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCC----CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG----HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ..||+|+||.||++...     ..+..+++|+++..    ........+..|+.+++.+ +||||+++++++.+....++
T Consensus         6 ~~ig~g~~g~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   79 (260)
T cd08222           6 QRLGKGSFGTVYLVKDK-----KAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCI   79 (260)
T ss_pred             eeecCCCCceEEEEEec-----CCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEE
Confidence            37999999999999876     33444555555431    1223344577899999999 99999999999998889999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------c
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------F  215 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------i  215 (258)
                      ++||+++++|.+++.....             ....+++..+..++.|++.||.|||+++++|+|||            +
T Consensus        80 v~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l  146 (260)
T cd08222          80 ITEYCEGRDLDCKLEELKH-------------TGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKI  146 (260)
T ss_pred             EEEeCCCCCHHHHHHHHhh-------------cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEee
Confidence            9999999999999875332             12348999999999999999999999999999985            7


Q ss_pred             cCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||++.......   ....+++.|+|||.+.+..++.++||.
T Consensus       147 ~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~  189 (260)
T cd08222         147 GDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIW  189 (260)
T ss_pred             cccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHH
Confidence            8999887653332   345678899999999888889999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.92  E-value=3.1e-24  Score=184.39  Aligned_cols=160  Identities=19%  Similarity=0.218  Sum_probs=131.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHH-------------HHHHHHHHHHHHHhcCCCcccceeee
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-------------MMDLVSEMEMMKMIGQHINIINLLGV  138 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------------~~~~~~E~~~l~~l~~h~nIv~l~~~  138 (258)
                      ..||+|+||.||+|...     .++..||+|+++.......             ...+.+|+.+++.+ +|+||++++++
T Consensus        15 ~~ig~G~~g~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~   88 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDT-----LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMGLVDV   88 (335)
T ss_pred             hcccCCCceeEEEEEEC-----CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceeeeeEE
Confidence            37999999999999986     5678999999865322110             12477999999999 99999999999


Q ss_pred             EEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----
Q psy12228        139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----  214 (258)
Q Consensus       139 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----  214 (258)
                      +...+..+++|||+. |+|.+++.....                 +++.....++.|++.||.|||+++++|+|||    
T Consensus        89 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~-----------------~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~ni  150 (335)
T PTZ00024         89 YVEGDFINLVMDIMA-SDLKKVVDRKIR-----------------LTESQVKCILLQILNGLNVLHKWYFMHRDLSPANI  150 (335)
T ss_pred             EecCCcEEEEEeccc-cCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHe
Confidence            999999999999997 599999976544                 8999999999999999999999999999995    


Q ss_pred             ---------ccCCCcceeeecc-----------------CCccccccccccccccccC-CCCccccee
Q psy12228        215 ---------FIGFDLCILVFFH-----------------DSTLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~-----------------~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                               ++|||++......                 .....+++.|+|||++.+. .++.++||.
T Consensus       151 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  218 (335)
T PTZ00024        151 FINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMW  218 (335)
T ss_pred             EECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHH
Confidence                     7899988754411                 1233567889999998764 468889874

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.92  E-value=4.4e-24  Score=184.33  Aligned_cols=159  Identities=22%  Similarity=0.280  Sum_probs=130.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC------Cc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD------GP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~------~~  144 (258)
                      ..||+|+||.||++...     .++..||+|+++... .....+.+.+|+.+++++ +||||+++++++...      ..
T Consensus        23 ~~lg~G~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~   96 (345)
T cd07877          23 SPVGSGAYGSVCAAFDT-----KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFND   96 (345)
T ss_pred             EEeeecCCeEEEEEEEc-----CCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc-CCCcccceeeeeeeccccccccc
Confidence            37999999999999876     577899999997532 233346688999999999 999999999988643      34


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .+++++++ +++|.+++... .                 +++..+..++.|++.||.|||+++|+|||||          
T Consensus        97 ~~lv~~~~-~~~L~~~~~~~-~-----------------l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~  157 (345)
T cd07877          97 VYLVTHLM-GADLNNIVKCQ-K-----------------LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC  157 (345)
T ss_pred             EEEEehhc-ccCHHHHHhcC-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCC
Confidence            67888877 67998877643 2                 8999999999999999999999999999996          


Q ss_pred             ---ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                         ++|||+++..........++..|+|||++.+ ..++.++||.
T Consensus       158 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw  202 (345)
T cd07877         158 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW  202 (345)
T ss_pred             CEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHH
Confidence               7899998865444455678899999999876 5678899974

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.92  E-value=6.7e-24  Score=181.90  Aligned_cols=162  Identities=17%  Similarity=0.210  Sum_probs=128.1

Q ss_pred             eeeec--CceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKC--AFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G--~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .||+|  +||.||.+...     .++..||+|++.... .....+.+.+|+.+++.+ +||||+++++++..++..++|+
T Consensus         5 ~ig~g~~~~~~v~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~   78 (328)
T cd08226           5 EIGRGFCNLTSVYLARHT-----PTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVIS   78 (328)
T ss_pred             HhCCcccCceeEEEEEEc-----CCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEE
Confidence            46666  99999999986     578999999997543 344557889999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCccc-------------c
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRF-------------I  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlKi-------------~  216 (258)
                      ||+.+|+|.+++.....               ..+++..+..++.|++.||+|||+++++|||||+             +
T Consensus        79 e~~~~~~l~~~l~~~~~---------------~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~  143 (328)
T cd08226          79 PFMAYGSANSLLKTYFP---------------EGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLS  143 (328)
T ss_pred             ecccCCCHHHHHHhhcc---------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEe
Confidence            99999999999987543               2389999999999999999999999999999983             3


Q ss_pred             CCCcceeeecc----------CCccccccccccccccccC--CCCccccee
Q psy12228        217 GFDLCILVFFH----------DSTLLKTTSTIASLILRNQ--KVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~----------~~~~~gt~~y~aPE~~~~~--~~s~~~Dv~  255 (258)
                      ||+.+......          .....++..|+|||++.+.  .++.++||.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diw  194 (328)
T cd08226         144 GLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIY  194 (328)
T ss_pred             chHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHH
Confidence            44322211100          0112345679999999763  478999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.91  E-value=7.5e-24  Score=176.51  Aligned_cols=170  Identities=28%  Similarity=0.370  Sum_probs=134.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------c
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------P  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------~  144 (258)
                      .+||+|+||.||+|.+..  ...++..||||++.... .....+++.+|+.+++.+ +||||+++++++....      .
T Consensus         5 ~~ig~g~~g~v~~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           5 RMLGKGEFGSVREAQLKS--EDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             hcccCCCCCCEEeeEeec--cCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCcccc
Confidence            379999999999998752  12457899999997543 344567799999999999 9999999999886532      2


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++++||+++|+|.+++......           .....+++..+..++.|++.||+|||+++|+|||||          
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~  150 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIG-----------EEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENM  150 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCC
Confidence            47889999999999988653310           011247899999999999999999999999999996          


Q ss_pred             ---ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++......     ....+++.|++||.+.+..++.++||.
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~  199 (273)
T cd05074         151 TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVW  199 (273)
T ss_pred             CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhH
Confidence               78999988643322     223445789999999998999999984

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.91  E-value=4.7e-24  Score=178.74  Aligned_cols=162  Identities=22%  Similarity=0.267  Sum_probs=133.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|++|.||+|...     .++..||+|++..... ......+.+|+++++.+ +||||+++++++.+++..+++||
T Consensus         5 ~~l~~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e   78 (283)
T cd07835           5 EKIGEGTYGVVYKARDK-----LTGEIVALKKIRLETEDEGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFE   78 (283)
T ss_pred             eEecCCCCeEEEEEEEc-----CCCCEEEEEEeecccccccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEe
Confidence            37899999999999987     5778999999975422 22335688999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |++ ++|.+++.....               ..+++..+..++.|++.||.|||+++++|+||+             ++|
T Consensus        79 ~~~-~~l~~~~~~~~~---------------~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~d  142 (283)
T cd07835          79 FLD-LDLKKYMDSSPL---------------TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLAD  142 (283)
T ss_pred             ccC-cCHHHHHhhCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEee
Confidence            996 599999987542               238999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccC-CCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      ||++.......   ....++..|+|||++.+. .++.++||.
T Consensus       143 f~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~  184 (283)
T cd07835         143 FGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIW  184 (283)
T ss_pred             cccccccCCCccccCccccccCCCCCceeecCcccCcHHHHH
Confidence            99987543222   234568899999988664 568889974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.91  E-value=5.5e-24  Score=181.07  Aligned_cols=162  Identities=23%  Similarity=0.309  Sum_probs=130.3

Q ss_pred             eeeec--CceEEEEEEEcccccCCceEEEEEEEecCC-CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKC--AFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G--~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      +||+|  ++|.||.++..     .++..||||+++.. ......+.+.+|+.+++.+ +|+||+++++++...+..+++|
T Consensus         5 ~i~~~~~~~~~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~   78 (314)
T cd08216           5 LIGKCFEDLMIVHLAKHK-----PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYVVS   78 (314)
T ss_pred             hhhHhhcCCceEEEEEec-----CCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEEEE
Confidence            34444  45666666665     46789999999754 3455667899999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....               ..+++..+..++.|++.||.|||+++|+|||||             ++
T Consensus        79 e~~~~~~l~~~l~~~~~---------------~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~  143 (314)
T cd08216          79 PLMAYGSCEDLLKTHFP---------------EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLS  143 (314)
T ss_pred             eccCCCCHHHHHHHhcc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEe
Confidence            99999999999987543               238899999999999999999999999999996             67


Q ss_pred             CCCcceeeeccC----------Ccccccccccccccccc--CCCCccccee
Q psy12228        217 GFDLCILVFFHD----------STLLKTTSTIASLILRN--QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~--~~~s~~~Dv~  255 (258)
                      |||.+.......          ....++..|+|||++..  ..++.++||.
T Consensus       144 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diw  194 (314)
T cd08216         144 GLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIY  194 (314)
T ss_pred             cCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHH
Confidence            888776442211          23456778999999876  4588999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.91  E-value=3.4e-24  Score=176.61  Aligned_cols=165  Identities=19%  Similarity=0.279  Sum_probs=139.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||++...     .++..+|+|.+.... .......+.+|+.+++.+ +|+||+++++++.+....++|+|
T Consensus         6 ~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd08530           6 KKLGKGSYGSVYKVKRL-----SDNQFYALKEVDLGSMSQKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVME   79 (256)
T ss_pred             eeecCCCceeEEEEEEC-----CCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEeh
Confidence            37999999999999887     577899999997532 344556788999999999 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.+...             ....+++..+..++.|++.||.|||++|++|+||+             ++|
T Consensus        80 ~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d  146 (256)
T cd08530          80 YAPFGDLSKAISKRKK-------------KRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGD  146 (256)
T ss_pred             hcCCCCHHHHHHHHHh-------------hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEee
Confidence            9999999999977432             12348999999999999999999999999999995             788


Q ss_pred             CCcceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++...... .....+++.|+|||.+.+..++.++|+.
T Consensus       147 ~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~  185 (256)
T cd08530         147 LGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIW  185 (256)
T ss_pred             ccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHH
Confidence            9888754433 2345678899999999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.91  E-value=7e-24  Score=180.15  Aligned_cols=161  Identities=17%  Similarity=0.252  Sum_probs=130.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv  148 (258)
                      ..||+|+||.||+|...     .++..||+|+++.... ......+.+|+.+++.+ +|+||+++++++...  +..++|
T Consensus        13 ~~ig~g~~~~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv   86 (309)
T cd07845          13 NRIGEGTYGIVYRARDT-----TSGEIVALKKVRMDNERDGIPISSLREITLLLNL-RHPNIVELKEVVVGKHLDSIFLV   86 (309)
T ss_pred             eeeeecCCEEEEEEEEC-----CCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-CCCCCcceEEEEecCCCCeEEEE
Confidence            37999999999999987     5788999999974322 22223567899999999 999999999998764  468999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+.+ +|.+++.....                .+++.++..++.|++.||.|||+++++|||||             +
T Consensus        87 ~e~~~~-~l~~~l~~~~~----------------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL  149 (309)
T cd07845          87 MEYCEQ-DLASLLDNMPT----------------PFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKI  149 (309)
T ss_pred             EecCCC-CHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence            999975 89998876432                38999999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        216 IGFDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      +|||++.......   ....+++.|+|||++.+ ..++.++||.
T Consensus       150 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw  193 (309)
T cd07845         150 ADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMW  193 (309)
T ss_pred             CccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHH
Confidence            8999988654332   23345778999999865 5678999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.91  E-value=4.8e-24  Score=182.73  Aligned_cols=160  Identities=22%  Similarity=0.340  Sum_probs=136.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-----cE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-----PL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-----~~  145 (258)
                      ..||+|++|.||+|...     .++..||+|.+..... ....+.+.+|+.+++.+ +|+||+++++++....     .+
T Consensus         6 ~~ig~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~~   79 (330)
T cd07834           6 KPIGSGAYGVVCSAVDK-----RTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFNDV   79 (330)
T ss_pred             eeecCCCCeEEEEEEeC-----CCCcEEEEEeeccccccchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccce
Confidence            37999999999999986     5678999999976432 34456799999999999 9999999999998765     78


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +++|||+++ +|.+++.....                 +++..+..++.|++.||.|||++||+|||||           
T Consensus        80 ~lv~e~~~~-~l~~~l~~~~~-----------------l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~  141 (330)
T cd07834          80 YIVTELMET-DLHKVIKSPQP-----------------LTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCD  141 (330)
T ss_pred             EEEecchhh-hHHHHHhCCCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence            999999985 89999876544                 9999999999999999999999999999996           


Q ss_pred             --ccCCCcceeeeccC------CccccccccccccccccC-CCCccccee
Q psy12228        215 --FIGFDLCILVFFHD------STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                        ++|||++.......      ....++..|+|||++.+. .++.++||.
T Consensus       142 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~  191 (330)
T cd07834         142 LKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIW  191 (330)
T ss_pred             EEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHH
Confidence              78999998654432      345678899999999887 789999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.91  E-value=1.9e-23  Score=177.98  Aligned_cols=159  Identities=18%  Similarity=0.306  Sum_probs=132.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .++..||+|.+....  .......+.+|+.+++.+ +|||++++++++.+....++|||
T Consensus        28 ~lg~g~~g~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e  101 (313)
T cd06633          28 EIGHGSFGAVYFATNS-----HTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAWLVME  101 (313)
T ss_pred             eeccCCCeEEEEEEEC-----CCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEEe
Confidence            6999999999999986     577899999986432  233446788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+. |+|.+++.....                .+++..+..++.|++.||.|||++|++|+|||             ++|
T Consensus       102 ~~~-~~l~~~l~~~~~----------------~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~d  164 (313)
T cd06633         102 YCL-GSASDLLEVHKK----------------PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLAD  164 (313)
T ss_pred             cCC-CCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEee
Confidence            997 588888865432                38999999999999999999999999999995             789


Q ss_pred             CCcceeeeccCCccccccccccccccc---cCCCCccccee
Q psy12228        218 FDLCILVFFHDSTLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                      ||++... .......|+..|+|||++.   +..++.++||.
T Consensus       165 fg~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~  204 (313)
T cd06633         165 FGSASKS-SPANSFVGTPYWMAPEVILAMDEGQYDGKVDVW  204 (313)
T ss_pred             cCCCccc-CCCCCccccccccChhhccccCCCCCCchhhHH
Confidence            9987642 2234567889999999984   45678888874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.91  E-value=1.6e-23  Score=176.93  Aligned_cols=162  Identities=14%  Similarity=0.171  Sum_probs=132.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||||.++..........+..|+.++.....|+||+++++++.+....+++|||
T Consensus        21 ~~lg~g~~~~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   95 (296)
T cd06618          21 GEIGSGTCGQVYKMRFK-----KTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMEL   95 (296)
T ss_pred             eEeeccCCeEEEEEEEC-----CCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeec
Confidence            38999999999999987     5678999999976544445566778888787774699999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------------i~d  217 (258)
                      +.+ +|.+++.....                .+++..+..++.|++.||.|||+ .+|+|||||             ++|
T Consensus        96 ~~~-~l~~l~~~~~~----------------~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~d  158 (296)
T cd06618          96 MST-CLDKLLKRIQG----------------PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCD  158 (296)
T ss_pred             cCc-CHHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECc
Confidence            865 88877765332                38999999999999999999997 599999995             789


Q ss_pred             CCcceeeeccC--CccccccccccccccccCC----CCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRNQK----VSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~----~s~~~Dv~  255 (258)
                      ||++.......  ....++..|+|||++.+..    ++.++||.
T Consensus       159 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~  202 (296)
T cd06618         159 FGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVW  202 (296)
T ss_pred             cccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHH
Confidence            99987543322  3345778999999997654    78899974

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.91  E-value=9.1e-24  Score=175.72  Aligned_cols=167  Identities=17%  Similarity=0.231  Sum_probs=135.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCC---------CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG---------HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD  142 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~  142 (258)
                      ..||+|+||.||+|....    ..+..+|+|.+...         .......++..|+.++.+..+||||+++++++..+
T Consensus         6 ~~ig~G~~~~v~~~~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           6 EHLGSGAFGCVYKVRKKN----NGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             hhhcCCCCceEEEEEEcC----CCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            379999999999999872    25688999988532         12334466788998887633999999999999999


Q ss_pred             CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------
Q psy12228        143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------  214 (258)
Q Consensus       143 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------  214 (258)
                      +..+++|||+++++|.+++.....             ....+++..++.++.|++.||.|||+ .+++|+|||       
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~-------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~  148 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKE-------------KKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG  148 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHh-------------ccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC
Confidence            999999999999999999865321             11348999999999999999999996 789999984       


Q ss_pred             ------ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ------FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ------i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                            ++|||++.......  ....++..|+|||++.+..++.++||.
T Consensus       149 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~  197 (269)
T cd08528         149 EDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVW  197 (269)
T ss_pred             CCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHH
Confidence                  78999988644332  356788899999999998899999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.91  E-value=6.1e-24  Score=182.58  Aligned_cols=159  Identities=19%  Similarity=0.290  Sum_probs=131.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~~l  147 (258)
                      .||+|+||.||+|...     .++..||+|++..... ......+.+|+.+++.+ +||||+++++++..    ....++
T Consensus        12 ~lg~g~~g~v~~~~~~-----~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~l   85 (334)
T cd07855          12 NIGSGAYGVVCSAIDT-----RSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGADFKDVYV   85 (334)
T ss_pred             eeecCCCeEEEEEEEc-----CCCCEEEEEEeccccccccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCCCceEEE
Confidence            7999999999999987     5788999999975422 23456788899999999 89999999998763    346899


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+. |+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             
T Consensus        86 v~e~~~-~~l~~~~~~~~~-----------------~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~k  147 (334)
T cd07855          86 VMDLME-SDLHHIIHSDQP-----------------LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELR  147 (334)
T ss_pred             EEehhh-hhHHHHhccCCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEE
Confidence            999996 599998876543                 8999999999999999999999999999995             


Q ss_pred             ccCCCcceeeeccC-------Ccccccccccccccccc-CCCCccccee
Q psy12228        215 FIGFDLCILVFFHD-------STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ++|||++.......       ....++..|+|||.+.+ ..++.++||.
T Consensus       148 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~  196 (334)
T cd07855         148 IGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMW  196 (334)
T ss_pred             ecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchH
Confidence            78999987643322       24578899999999866 5689999974

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.91  E-value=8.8e-24  Score=181.85  Aligned_cols=160  Identities=19%  Similarity=0.319  Sum_probs=132.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-----CcE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-----GPL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-----~~~  145 (258)
                      ..||+|+||.||++...     .++..||||.++... .......+.+|+.+++.+ +|+||+++++++...     ...
T Consensus        11 ~~lg~G~~~~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858          11 KPIGRGAYGIVCSAKNS-----ETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             EEeccCCCeEEEEEEec-----CCCCeEEEEEecccccccchhHHHHHHHHHHHhc-CCCCccchHHheecccccccCcE
Confidence            38999999999999987     578999999987532 223345678899999999 999999999988654     348


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++++||+. ++|.+++.....                 +++..+..++.|++.||.|||+++++|||||           
T Consensus        85 ~lv~e~~~-~~L~~~~~~~~~-----------------l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~  146 (337)
T cd07858          85 YIVYELMD-TDLHQIIRSSQT-----------------LSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCD  146 (337)
T ss_pred             EEEEeCCC-CCHHHHHhcCCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC
Confidence            99999997 599999876554                 9999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        215 --FIGFDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                        ++|||++.......   ....++..|+|||++.. ..++.++||.
T Consensus       147 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw  193 (337)
T cd07858         147 LKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVW  193 (337)
T ss_pred             EEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHH
Confidence              78999998654331   34567889999999865 4689999974

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.91  E-value=1.2e-23  Score=176.10  Aligned_cols=161  Identities=19%  Similarity=0.306  Sum_probs=134.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv  148 (258)
                      ..||+|+||.||+|...     .++..+|+|.+.... .......+.+|+.+++.+ +|+|++++++++...  +..++|
T Consensus         5 ~~l~~g~~~~vy~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv   78 (287)
T cd07840           5 AQIGEGTYGQVYKARNK-----KTGELVALKKIRMENEKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYMV   78 (287)
T ss_pred             EEeccCCCeEEEEEEEC-----CCCeEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEEE
Confidence            37899999999999987     567899999997653 233346688999999999 899999999999987  789999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      +||+++ +|.+++....                ..+++..++.++.||+.||.|||+++++|+|||             +
T Consensus        79 ~e~~~~-~l~~~~~~~~----------------~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l  141 (287)
T cd07840          79 FEYMDH-DLTGLLDSPE----------------VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKL  141 (287)
T ss_pred             eccccc-cHHHHHhccC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEE
Confidence            999985 9998887652                138999999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccC----Ccccccccccccccccc-CCCCccccee
Q psy12228        216 IGFDLCILVFFHD----STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      +|||++.......    ....++..|+|||.+.+ ..++.++||.
T Consensus       142 ~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~  186 (287)
T cd07840         142 ADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMW  186 (287)
T ss_pred             ccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHH
Confidence            8999988654432    23456788999998765 4578999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG1151|consensus

Probab=99.91  E-value=6.5e-25  Score=185.80  Aligned_cols=163  Identities=19%  Similarity=0.198  Sum_probs=136.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh------HHHHHHHHHHHHHHHhcCCCcccceeeeEE-cCCc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD------AEMMDLVSEMEMMKMIGQHINIINLLGVCT-QDGP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~-~~~~  144 (258)
                      .+||+|+|+.||++...     ...+.||||+-....+.      ...+...+|..+.+.| .||.||++|+++. +...
T Consensus       469 hLLGrGGFSEVyKAFDl-----~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDyfslDtds  542 (775)
T KOG1151|consen  469 HLLGRGGFSEVYKAFDL-----TEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDYFSLDTDS  542 (775)
T ss_pred             HHhccccHHHHHHhccc-----chhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeeeeeecccc
Confidence            36899999999999876     56788999987433222      2235678999999999 9999999999997 4557


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC--CccccCcc--------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR--KVGNDAVR--------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~--~iiH~DlK--------  214 (258)
                      .|-|+|||+|.+|.-||+.+..                 +++..++.|+.||+.||.||...  .|||-|||        
T Consensus       543 FCTVLEYceGNDLDFYLKQhkl-----------------mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~  605 (775)
T KOG1151|consen  543 FCTVLEYCEGNDLDFYLKQHKL-----------------MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVN  605 (775)
T ss_pred             ceeeeeecCCCchhHHHHhhhh-----------------hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEec
Confidence            9999999999999999998876                 99999999999999999999986  89999985        


Q ss_pred             --------ccCCCcceeeeccC----------Ccccccccccccccccc----CCCCcccceeEe
Q psy12228        215 --------FIGFDLCILVFFHD----------STLLKTTSTIASLILRN----QKVSVLLDLIFV  257 (258)
Q Consensus       215 --------i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~----~~~s~~~Dv~~~  257 (258)
                              |.||||+++.....          +..+||.+|++||++.-    .+++.|+||-.|
T Consensus       606 GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSv  670 (775)
T KOG1151|consen  606 GTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSV  670 (775)
T ss_pred             CcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEee
Confidence                    78999999865432          46789999999999753    467899997544

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.91  E-value=2.4e-23  Score=174.46  Aligned_cols=163  Identities=21%  Similarity=0.293  Sum_probs=133.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-HHHHHHHHHHHHHHHhc--CCCcccceeeeEEcCCc----
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-AEMMDLVSEMEMMKMIG--QHINIINLLGVCTQDGP----  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~--~h~nIv~l~~~~~~~~~----  144 (258)
                      ..||+|+||.||+|..+     .++..||+|+++..... .....+.+|+.+++.+.  .|+||+++++++...+.    
T Consensus         5 ~~l~~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   79 (287)
T cd07838           5 AEIGEGAYGTVYKARDL-----NTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL   79 (287)
T ss_pred             EEecccCceEEEEEEEC-----CCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence            37899999999999987     46789999999753322 22345677888777763  59999999999988776    


Q ss_pred             -EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        145 -LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       145 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                       .+++|||+++ +|.+++.....               ..+++..++.++.|++.||.|||+++++|+|||         
T Consensus        80 ~~~l~~e~~~~-~l~~~l~~~~~---------------~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~  143 (287)
T cd07838          80 KLTLVFEHVDQ-DLATYLSKCPK---------------PGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSD  143 (287)
T ss_pred             eeEEEehhccc-CHHHHHHHccC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccC
Confidence             9999999985 89998876432               238999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||++.......  ....++..|+|||++.+..++.++||.
T Consensus       144 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~  190 (287)
T cd07838         144 GQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMW  190 (287)
T ss_pred             CCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhh
Confidence                78999987654332  344578899999999998999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG2345|consensus

Probab=99.91  E-value=2.4e-24  Score=169.91  Aligned_cols=162  Identities=12%  Similarity=0.187  Sum_probs=135.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-----cEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-----PLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-----~~~l  147 (258)
                      .||+|+|+.||+++.-     .++..+|+|++... ..++.+..++|++..+++ +|||+++++++...+.     ..||
T Consensus        28 ~LgeGGfsfv~LV~~~-----s~~~~YAlKkI~c~-~~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~~~~~yl  100 (302)
T KOG2345|consen   28 LLGEGGFSFVDLVKGL-----STGHLYALKKILCH-SQEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDGKHEAYL  100 (302)
T ss_pred             eecCCCceeeeeeccc-----Ccccchhhheeecc-chHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccCceeEEE
Confidence            7999999999999965     57899999999875 456678899999999999 9999999999876433     4999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--ccccCcc-----------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK--VGNDAVR-----------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--iiH~DlK-----------  214 (258)
                      +++|...|+|.+.+.....             .+..+++.+++.|+.+|++||++||+..  +.|||||           
T Consensus       101 l~Pyy~~Gsl~d~i~~~k~-------------kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~  167 (302)
T KOG2345|consen  101 LLPYYKRGSLLDEIERLKI-------------KGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGL  167 (302)
T ss_pred             EeehhccccHHHHHHHHhh-------------cCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCc
Confidence            9999999999999987654             2456999999999999999999999998  9999998           


Q ss_pred             --ccCCCcceeeeccC------------Ccccccccccccccccc---CCCCcccce
Q psy12228        215 --FIGFDLCILVFFHD------------STLLKTTSTIASLILRN---QKVSVLLDL  254 (258)
Q Consensus       215 --i~dfgl~~~~~~~~------------~~~~gt~~y~aPE~~~~---~~~s~~~Dv  254 (258)
                        +.|||.+......-            ....-|..|.|||.+.-   ...++++||
T Consensus       168 ~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDI  224 (302)
T KOG2345|consen  168 PVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDI  224 (302)
T ss_pred             eEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccch
Confidence              45888876543321            14456789999999864   566899997

>KOG0608|consensus

Probab=99.91  E-value=2.1e-24  Score=189.38  Aligned_cols=160  Identities=16%  Similarity=0.236  Sum_probs=139.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||-|+||+|.++.-.     .+...+|+|.+++..  ...+...+..|-.||... .++-||+||..|.+.+.+|+||+
T Consensus       636 ~iGvGAFGeV~Lv~Kv-----DT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  636 TIGVGAFGEVCLVRKV-----DTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             eecccccceeEEEeec-----chhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEEe
Confidence            5899999999999866     466889999997532  345567788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |++||++..+|.+.+.                 +.+..++.|+..+..|+++.|..|+||||||             +.|
T Consensus       710 YIPGGDmMSLLIrmgI-----------------FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTD  772 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIRMGI-----------------FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTD  772 (1034)
T ss_pred             ccCCccHHHHHHHhcc-----------------CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeee
Confidence            9999999999999887                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---------------------------------------------CccccccccccccccccCCCCccc
Q psy12228        218 FDLCILVFFHD---------------------------------------------STLLKTTSTIASLILRNQKVSVLL  252 (258)
Q Consensus       218 fgl~~~~~~~~---------------------------------------------~~~~gt~~y~aPE~~~~~~~s~~~  252 (258)
                      ||||.-+.+..                                             ...+||+.|+|||++....|+..+
T Consensus       773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c  852 (1034)
T KOG0608|consen  773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC  852 (1034)
T ss_pred             ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence            99986432210                                             156899999999999999999999


Q ss_pred             cee
Q psy12228        253 DLI  255 (258)
Q Consensus       253 Dv~  255 (258)
                      ||-
T Consensus       853 dww  855 (1034)
T KOG0608|consen  853 DWW  855 (1034)
T ss_pred             hhh
Confidence            974

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.91  E-value=1.6e-23  Score=177.12  Aligned_cols=161  Identities=19%  Similarity=0.300  Sum_probs=130.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-------
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-------  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-------  143 (258)
                      ..||+|+||.||+|...     .++..||+|+++.... ......+.+|+.+++.+ +||||+++++++.+..       
T Consensus        13 ~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~~~~   86 (302)
T cd07864          13 GQIGEGTYGQVYKARDK-----DTGELVALKKVRLDNEKEGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALDFKK   86 (302)
T ss_pred             eeecccCCEEEEEEEEC-----CCCcEEEEEEEeecccccCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhhccc
Confidence            38999999999999987     5678999999975422 22335678899999999 9999999999987654       


Q ss_pred             ---cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------
Q psy12228        144 ---PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------  214 (258)
Q Consensus       144 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------  214 (258)
                         .+++++||+++ +|..++....                ..+++..+..++.|++.||.|||+.+|+|+|||      
T Consensus        87 ~~~~~~lv~e~~~~-~l~~~l~~~~----------------~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili  149 (302)
T cd07864          87 DKGAFYLVFEYMDH-DLMGLLESGL----------------VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL  149 (302)
T ss_pred             cCCcEEEEEcccCc-cHHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence               78999999986 8888776543                238999999999999999999999999999985      


Q ss_pred             -------ccCCCcceeeeccC----Ccccccccccccccccc-CCCCccccee
Q psy12228        215 -------FIGFDLCILVFFHD----STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -------i~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                             ++|||++.......    ....++..|+|||++.+ ..++.++||.
T Consensus       150 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~  202 (302)
T cd07864         150 NNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVW  202 (302)
T ss_pred             CCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHH
Confidence                   78999887643322    22355788999998865 4568889974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.91  E-value=2.1e-23  Score=179.16  Aligned_cols=161  Identities=23%  Similarity=0.285  Sum_probs=130.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCc--eEEEEEEEecCCCCh-HHHHHHHHHHHHHHHhcCCCcccceeeeEEcC----Cc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGI--ITTVAVKMLKEGHSD-AEMMDLVSEMEMMKMIGQHINIINLLGVCTQD----GP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~--~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~----~~  144 (258)
                      ..||+|+||.||++...     ..  +..||+|.+...... ...+.+.+|+.+++.+.+||||+++++.+...    ..
T Consensus         6 ~~lg~G~~g~vy~~~~~-----~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           6 KELGQGAYGIVCSARNA-----ETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             EEccccCCeEEEEEEeC-----CCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            37999999999999987     34  678999998753222 23456889999999996699999999876432    35


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++++||+. ++|.+++.....                 +++..++.++.||+.||.|||++|++|||||          
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~  142 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSGQP-----------------LTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC  142 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcCCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC
Confidence            788999987 599999876544                 8999999999999999999999999999985          


Q ss_pred             ---ccCCCcceeeeccC-------Ccccccccccccccccc-CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD-------STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                         ++|||+++......       ....||..|+|||++.+ ..++.++||.
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~  194 (332)
T cd07857         143 ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVW  194 (332)
T ss_pred             CEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHH
Confidence               78999997543221       23578899999998765 5689999974

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0984|consensus

Probab=99.91  E-value=2.1e-24  Score=166.23  Aligned_cols=163  Identities=18%  Similarity=0.212  Sum_probs=140.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|++|.|-+-++.     .+|...|+|.++.....+..++.+.|+.+..+...+|.+|.+||.......+||.||.|
T Consensus        53 elGrGayG~vekmrh~-----~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M  127 (282)
T KOG0984|consen   53 ELGRGAYGVVEKMRHI-----QSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM  127 (282)
T ss_pred             hhcCCccchhhheeec-----cCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence            5899999999988887     68899999999987778888899999998877668999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------ccCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FIGF  218 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~df  218 (258)
                      .- ||..+.++.-.             .+..+++.-+-+|+..+..||.|||++ .+||||+|             +|||
T Consensus       128 ~t-Sldkfy~~v~~-------------~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDF  193 (282)
T KOG0984|consen  128 DT-SLDKFYRKVLK-------------KGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDF  193 (282)
T ss_pred             hh-hHHHHHHHHHh-------------cCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccc
Confidence            86 99888765432             234599999999999999999999997 99999995             8899


Q ss_pred             CcceeeeccC--Ccccccccccccccccc----CCCCcccce
Q psy12228        219 DLCILVFFHD--STLLKTTSTIASLILRN----QKVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~~~--~~~~gt~~y~aPE~~~~----~~~s~~~Dv  254 (258)
                      |++..+..+-  ..-+|...|||||.+..    ..|+-+|||
T Consensus       194 GIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDv  235 (282)
T KOG0984|consen  194 GISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDV  235 (282)
T ss_pred             ccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhh
Confidence            9998765543  34688899999999864    488999997

>KOG0669|consensus

Probab=99.91  E-value=3.5e-26  Score=180.93  Aligned_cols=159  Identities=17%  Similarity=0.334  Sum_probs=131.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--------C
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--------G  143 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--------~  143 (258)
                      +||+|.||.||+++.+     .+++.||+|.+--+. .+..-...++|+.+|..+ +|+|++.++.+|...        .
T Consensus        24 kigqGtfgeVFkAr~~-----n~~kkvalkkvlmeneKeGfpitalreikiL~~l-kHenv~nliEic~tk~Tp~~r~r~   97 (376)
T KOG0669|consen   24 KIGQGTFGEVFKARSK-----NTGKKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPTNRDRA   97 (376)
T ss_pred             hcCCchHHHHHHHhhc-----CccchhHHHHHHHhccccCCcHHHHHHHHHHHHh-cchhHHHHHHHHhhccCCcccccc
Confidence            7999999999999987     688889988773211 222234567999999999 999999999988642        2


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      .+++|+.+|+. +|.-.|.....                .++...+..++.++..||.|+|++.|+|||+|         
T Consensus        98 t~ylVf~~ceh-DLaGlLsn~~v----------------r~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~d  160 (376)
T KOG0669|consen   98 TFYLVFDFCEH-DLAGLLSNRKV----------------RFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKD  160 (376)
T ss_pred             eeeeeHHHhhh-hHHHHhcCccc----------------cccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCC
Confidence            48999999998 99999887642                39999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeeccC-------Ccccccccccccccccc-CCCCcccce
Q psy12228        215 ----FIGFDLCILVFFHD-------STLLKTTSTIASLILRN-QKVSVLLDL  254 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~-~~~s~~~Dv  254 (258)
                          ++|||+++.+...+       ..++-|.+|.+||.+.| ..|+++.||
T Consensus       161 gilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDi  212 (376)
T KOG0669|consen  161 GILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDI  212 (376)
T ss_pred             ceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchh
Confidence                78999998766554       24455899999999876 678999986

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.91  E-value=5e-23  Score=174.98  Aligned_cols=159  Identities=19%  Similarity=0.294  Sum_probs=132.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCC--CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .++..+|+|.+...  .......++.+|+.+++.+ +|+|++++++++......++|||
T Consensus        22 ~lg~g~~g~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          22 EIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             heeeCCCEEEEEEEEc-----CCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeEEEEE
Confidence            7899999999999987     56788999998642  2334456788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+. |+|.+++.....                .+++..+..++.|++.||.|||+++++|||||             ++|
T Consensus        96 ~~~-~~l~~~~~~~~~----------------~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~d  158 (308)
T cd06634          96 YCL-GSASDLLEVHKK----------------PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGD  158 (308)
T ss_pred             ccC-CCHHHHHHHcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECC
Confidence            997 588888765432                38999999999999999999999999999995             789


Q ss_pred             CCcceeeeccCCccccccccccccccc---cCCCCccccee
Q psy12228        218 FDLCILVFFHDSTLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                      ||++..... .....+++.|+|||++.   ...++.++||.
T Consensus       159 fg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~  198 (308)
T cd06634         159 FGSASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVW  198 (308)
T ss_pred             cccceeecC-cccccCCccccCHHHHhhcccCCCCcccchH
Confidence            998875432 34567889999999974   35678899984

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.90  E-value=1.4e-23  Score=175.51  Aligned_cols=161  Identities=22%  Similarity=0.291  Sum_probs=135.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|.+|.||+|...     .++..+|+|++.... .....+.+..|+.+++.+ +|+||+++++++.+.+..++|+|
T Consensus         5 ~~ig~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e   78 (282)
T cd07829           5 EKLGEGTYGVVYKARDK-----KTGEIVALKKIRLDNEEEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVFE   78 (282)
T ss_pred             hcccccCcceEEEeeec-----CCCcEEEEEEeccccccccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEEEec
Confidence            37899999999999987     568899999997643 233346688999999999 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++ +|.+++.....                .+++..+..++.|++.||.|||+++|+||||+             ++|
T Consensus        79 ~~~~-~l~~~i~~~~~----------------~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d  141 (282)
T cd07829          79 YCDM-DLKKYLDKRPG----------------PLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLAD  141 (282)
T ss_pred             CcCc-CHHHHHHhhcc----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEec
Confidence            9985 99999987631                28999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccC-CCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      ||++.......   ....++..|+|||.+.+. .++.++||.
T Consensus       142 ~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~  183 (282)
T cd07829         142 FGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIW  183 (282)
T ss_pred             CCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHH
Confidence            99887654332   234557789999998776 789999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.90  E-value=1.9e-23  Score=180.21  Aligned_cols=158  Identities=22%  Similarity=0.284  Sum_probs=129.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------c
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------P  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------~  144 (258)
                      ..||+|+||.||+|...     .++..||+|+++... .......+.+|+.+++.+ +||||+++++++....      .
T Consensus        21 ~~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          21 KQVGSGAYGSVCSAIDK-----RTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             EEeeecCCeEEEEEEeC-----CCCcEEEEEEecCccccccchhHHHHHHHHHHhc-CCCCccchhheecccccCCCCce
Confidence            48999999999999986     577899999986532 223345688999999999 9999999999987543      4


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++|+||+.. +|..++.  .                 .+++..+..++.|++.||.|||+++++|||||          
T Consensus        95 ~~lv~e~~~~-~l~~~~~--~-----------------~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~  154 (342)
T cd07879          95 FYLVMPYMQT-DLQKIMG--H-----------------PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC  154 (342)
T ss_pred             EEEEeccccc-CHHHHHc--C-----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            6899999975 7776652  1                 28999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                         ++|||+++..........++..|+|||++.+ ..++.++||.
T Consensus       155 ~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  199 (342)
T cd07879         155 ELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIW  199 (342)
T ss_pred             CEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHH
Confidence               7899998865444455677899999999876 4678899974

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.90  E-value=3.1e-23  Score=178.41  Aligned_cols=160  Identities=21%  Similarity=0.284  Sum_probs=130.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv  148 (258)
                      ..||+|+||.||+|...     .++..+|+|++.... .......+.+|+.+++++++||||+++++++...  ...++|
T Consensus        13 ~~lg~g~~~~v~~~~~~-----~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv   87 (337)
T cd07852          13 QKLGKGAYGIVWKAIDR-----RTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLV   87 (337)
T ss_pred             HhhcCCCCeeEEEEEEc-----CCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEE
Confidence            37999999999999986     567899999885432 2334456788999999998899999999998654  358999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++ +|.+++... .                 +++..+..++.||+.||.|||++||+|||||             +
T Consensus        88 ~e~~~~-~L~~~~~~~-~-----------------~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl  148 (337)
T cd07852          88 FEYMET-DLHAVIRAN-I-----------------LEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKL  148 (337)
T ss_pred             eccccc-CHHHHHhcC-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEE
Confidence            999985 999988764 3                 8899999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccC--------Ccccccccccccccccc-CCCCccccee
Q psy12228        216 IGFDLCILVFFHD--------STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~--------~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      +|||++.......        ....++..|+|||.+.+ ..++.++||.
T Consensus       149 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~  197 (337)
T cd07852         149 ADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMW  197 (337)
T ss_pred             eeccchhccccccccccCcchhcccccccccCceeeeccccccccchHH
Confidence            8999887543322        23567889999998765 4578899974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0596|consensus

Probab=99.90  E-value=7.7e-24  Score=183.21  Aligned_cols=160  Identities=16%  Similarity=0.168  Sum_probs=133.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEe-cCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~-~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .+||+|+.++||++...      +...+|+|.+ ....+.+....|..|+..|.+|..|.+||++++|-..++.+|||||
T Consensus       367 k~iG~GGSSkV~kV~~s------~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  367 KQIGSGGSSKVFKVLNS------DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             HhhcCCCcceeeeeecC------CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            36999999999999875      3355666555 4455677788999999999999899999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------ccCC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------FIGF  218 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------i~df  218 (258)
                      |-+. ||..+|+.....                ++...++.|..|++.|+.++|..||||.|||            ++||
T Consensus       441 ~Gd~-DL~kiL~k~~~~----------------~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDF  503 (677)
T KOG0596|consen  441 CGDI-DLNKILKKKKSI----------------DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDF  503 (677)
T ss_pred             cccc-cHHHHHHhccCC----------------CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeee
Confidence            8876 999999986641                3434788999999999999999999999996            7899


Q ss_pred             CcceeeeccC-----CccccccccccccccccC-----------CCCcccce
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQ-----------KVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~-----------~~s~~~Dv  254 (258)
                      |+|.......     .+-+||+.||+||.+...           +++++|||
T Consensus       504 GIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDv  555 (677)
T KOG0596|consen  504 GIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDV  555 (677)
T ss_pred             chhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccch
Confidence            9998765554     477999999999998653           34577776

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.90  E-value=3.2e-23  Score=178.74  Aligned_cols=158  Identities=22%  Similarity=0.294  Sum_probs=128.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC---------
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD---------  142 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~---------  142 (258)
                      ..||+|+||.||+|...     .++..||+|.+..... ...+.+.+|+.+++.+ +||||+++++++...         
T Consensus        11 ~~Lg~g~~g~vy~~~~~-----~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854          11 RPLGCGSNGLVFSAVDS-----DCDKRVAVKKIVLTDP-QSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             EEecCCCCEEEEEEEEC-----CCCcEEEEEEEecCCC-chHHHHHHHHHHHHhc-CCCcchhhHhhhcccccccccccc
Confidence            37999999999999987     5788999999975432 4456788999999999 999999999876543         


Q ss_pred             -----CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---
Q psy12228        143 -----GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---  214 (258)
Q Consensus       143 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---  214 (258)
                           ...+++|||+++ +|.+++... .                 +++..++.++.||+.||.|||++||+|||||   
T Consensus        84 ~~~~~~~~~lv~e~~~~-~L~~~~~~~-~-----------------l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~N  144 (342)
T cd07854          84 SLTELNSVYIVQEYMET-DLANVLEQG-P-----------------LSEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN  144 (342)
T ss_pred             cccccceEEEEeecccc-cHHHHHHcC-C-----------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence                 347899999984 999888643 2                 8999999999999999999999999999995   


Q ss_pred             -----------ccCCCcceeeeccC------Ccccccccccccccccc-CCCCccccee
Q psy12228        215 -----------FIGFDLCILVFFHD------STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -----------i~dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                                 ++|||++.......      ....++..|+|||++.. ..++.++||.
T Consensus       145 ili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw  203 (342)
T cd07854         145 VFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMW  203 (342)
T ss_pred             EEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHH
Confidence                       67899887542211      23457889999998754 5678899974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.90  E-value=2.8e-23  Score=179.14  Aligned_cols=160  Identities=21%  Similarity=0.283  Sum_probs=133.2

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc-----
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP-----  144 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~-----  144 (258)
                      ...||+|+||.||+|...     .++..||+|++.... .......+.+|+.+++.+ +|+||+++++++...+.     
T Consensus        20 ~~~ig~g~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          20 LSPVGSGAYGQVCSAFDT-----KTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             EEEeccCCceEEEEEEEC-----CCCcEEEEEecccccchhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccccccccc
Confidence            348999999999999987     567899999986532 233446688999999999 99999999998876554     


Q ss_pred             -EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        145 -LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       145 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                       .++|+||+. ++|.+++... .                 +++..+..++.|++.||.|||++||+|||||         
T Consensus        94 ~~~lv~e~~~-~~L~~~~~~~-~-----------------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~  154 (343)
T cd07851          94 DVYLVTHLMG-ADLNNIVKCQ-K-----------------LSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED  154 (343)
T ss_pred             cEEEEEecCC-CCHHHHHhcC-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence             899999994 5999988752 2                 8999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                          ++|||++...........++..|+|||.+.+ ..++.++||.
T Consensus       155 ~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw  200 (343)
T cd07851         155 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW  200 (343)
T ss_pred             CCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHH
Confidence                7899999866555556678899999999865 3678899974

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.90  E-value=4.7e-23  Score=174.06  Aligned_cols=162  Identities=13%  Similarity=0.150  Sum_probs=119.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH--H--------HHHHHHHHHHHHHhcCCCcccceeeeEEcC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA--E--------MMDLVSEMEMMKMIGQHINIINLLGVCTQD  142 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~--------~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~  142 (258)
                      +||+|+||.||+|...+.  ......+|+|+........  +        ......+...+..+ .|+||+.+++++...
T Consensus        19 ~LG~G~fG~Vy~~~~~~~--~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~   95 (294)
T PHA02882         19 LIGCGGFGCVYETQCASD--HCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPKYYGCGSFK   95 (294)
T ss_pred             EEecCCCceEEEEEEcCC--cccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCcEEEeeeEe
Confidence            799999999999998621  0114567777653321111  0        01123344455667 899999999987654


Q ss_pred             C----cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----
Q psy12228        143 G----PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----  214 (258)
Q Consensus       143 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----  214 (258)
                      .    ..++++|++.. ++.+.+.....                 .++..+..++.|++.||.|||+++|+|||||    
T Consensus        96 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------------~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Ni  157 (294)
T PHA02882         96 RCRMYYRFILLEKLVE-NTKEIFKRIKC-----------------KNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENI  157 (294)
T ss_pred             cCCceEEEEEEehhcc-CHHHHHHhhcc-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence            3    34678887764 77777765443                 6788899999999999999999999999996    


Q ss_pred             ---------ccCCCcceeeecc----------CCccccccccccccccccCCCCccccee
Q psy12228        215 ---------FIGFDLCILVFFH----------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                               ++|||+|+.....          .....||+.|+|||++.+..++.++||.
T Consensus       158 ll~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~Diw  217 (294)
T PHA02882        158 MVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLE  217 (294)
T ss_pred             EEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHH
Confidence                     7899999865322          1245799999999999999999999974

>KOG1006|consensus

Probab=99.90  E-value=6.6e-25  Score=174.76  Aligned_cols=166  Identities=16%  Similarity=0.185  Sum_probs=137.9

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||.|+||.|++-.++     .+++..|||.++....+.+..+++.|.+...+-.+.||||++||++..++..||.||
T Consensus        69 lg~iG~G~fG~V~KM~hk-----~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   69 LGEIGNGAFGTVNKMLHK-----PSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             HHHhcCCcchhhhhhhcC-----ccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            337999999999999988     788999999999877777788999999987777699999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------cc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FI  216 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~  216 (258)
                      .|.- ||..+.+.--..            +...+++.-+-.|....+.||.||... .|||||+|             +|
T Consensus       144 LMd~-SlDklYk~vy~v------------q~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLC  210 (361)
T KOG1006|consen  144 LMDI-SLDKLYKRVYSV------------QKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLC  210 (361)
T ss_pred             HHhh-hHHHHHHHHHHH------------HhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeee
Confidence            9975 887665532100            113489999999999999999999875 99999995             88


Q ss_pred             CCCcceeeecc--CCcccccccccccccccc--CCCCcccce
Q psy12228        217 GFDLCILVFFH--DSTLLKTTSTIASLILRN--QKVSVLLDL  254 (258)
Q Consensus       217 dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~--~~~s~~~Dv  254 (258)
                      |||++..+..+  ...-+|...|||||.+..  ..|+.+|||
T Consensus       211 DFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDv  252 (361)
T KOG1006|consen  211 DFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDV  252 (361)
T ss_pred             cccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhh
Confidence            99999865433  356789999999999964  468999997

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.90  E-value=4.8e-23  Score=172.30  Aligned_cols=160  Identities=23%  Similarity=0.284  Sum_probs=135.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|++|.||+|...     .++..+++|.++..... .....+.+|+.+++.+ +|+||+++++++.+++..++++||
T Consensus         6 ~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~   79 (283)
T cd05118           6 KIGEGTYGVVYKARDK-----LTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFEF   79 (283)
T ss_pred             eeecCCCceEEEEEcC-----CCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEec
Confidence            7899999999999986     57789999999754322 3456788999999999 899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++ +|.+++.....                .+++..+..++.|++.||.|||+++|+|+|||             ++||
T Consensus        80 ~~~-~l~~~l~~~~~----------------~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df  142 (283)
T cd05118          80 MDT-DLYKLIKDRQR----------------GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADF  142 (283)
T ss_pred             cCC-CHHHHHHhhcc----------------cCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeee
Confidence            986 99998877432                38999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC---CccccccccccccccccC-CCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      |.+.......   ....++..|+|||.+.+. .++.++||.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~  183 (283)
T cd05118         143 GLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIW  183 (283)
T ss_pred             eeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHH
Confidence            9887654332   235677889999999876 778999974

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG1035|consensus

Probab=99.90  E-value=2.9e-24  Score=199.64  Aligned_cols=160  Identities=16%  Similarity=0.250  Sum_probs=125.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC---------
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG---------  143 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~---------  143 (258)
                      +||+|+||.||+++.+     -+|+.+|||+|.-..+......+.+|+..|+++ +|||||+++..+.+..         
T Consensus       486 lLGkGGFG~VvkVRNK-----lDGr~YAIKKIpl~~s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~~~~~~ei~  559 (1351)
T KOG1035|consen  486 LLGKGGFGSVVKVRNK-----LDGREYAIKKIPLKASDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTAELTVLEIV  559 (1351)
T ss_pred             HhcCCCCceEEEEeec-----ccchhhhhhhccCchHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCCcccccccc
Confidence            6999999999999998     789999999998765666678899999999999 9999999886652110         


Q ss_pred             --------------------------------------------------------------------------------
Q psy12228        144 --------------------------------------------------------------------------------  143 (258)
Q Consensus       144 --------------------------------------------------------------------------------  143 (258)
                                                                                                      
T Consensus       560 ~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~  639 (1351)
T KOG1035|consen  560 ASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGS  639 (1351)
T ss_pred             ccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCc
Confidence                                                                                            


Q ss_pred             ------------------------------cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCC-CHHHHHHH
Q psy12228        144 ------------------------------PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVL-TEKDLISF  192 (258)
Q Consensus       144 ------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~i  192 (258)
                                                    .+||=||||+...|.+++..+..                 . .....+.+
T Consensus       640 ~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~-----------------~~~~d~~wrL  702 (1351)
T KOG1035|consen  640 VILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF-----------------NSQRDEAWRL  702 (1351)
T ss_pred             cccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc-----------------chhhHHHHHH
Confidence                                          13455666665444444443321                 2 36678999


Q ss_pred             HHHHHHHHHHHhhCCccccCcc-------------ccCCCcceeeec---------------------cCCccccccccc
Q psy12228        193 AYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILVFF---------------------HDSTLLKTTSTI  238 (258)
Q Consensus       193 ~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~---------------------~~~~~~gt~~y~  238 (258)
                      +++|+.||.|+|++||||||||             |.|||+|.....                     .....+||.-|+
T Consensus       703 FreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYv  782 (1351)
T KOG1035|consen  703 FREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYV  782 (1351)
T ss_pred             HHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeee
Confidence            9999999999999999999996             789999986220                     013678999999


Q ss_pred             cccccccCC---CCccccee
Q psy12228        239 ASLILRNQK---VSVLLDLI  255 (258)
Q Consensus       239 aPE~~~~~~---~s~~~Dv~  255 (258)
                      |||++.+..   |+.|+|++
T Consensus       783 APEll~~~~~~~Yn~KiDmY  802 (1351)
T KOG1035|consen  783 APELLSDTSSNKYNSKIDMY  802 (1351)
T ss_pred             cHHHhcccccccccchhhhH
Confidence            999998755   99999985

>KOG0664|consensus

Probab=99.90  E-value=1.7e-25  Score=178.97  Aligned_cols=163  Identities=21%  Similarity=0.289  Sum_probs=134.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-----c
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-----P  144 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-----~  144 (258)
                      ...||-|+||.||.+...     ++++.||+|++.... .-..-+++.+|+.+|..+ +|.|++..+++.....     .
T Consensus        58 DRPIGYGAFGVVWsVTDP-----RdgrrvalkK~pnvfq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFqE  131 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDP-----RSGKRVALKKMPNVFQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQE  131 (449)
T ss_pred             CCcccccceeEEEeccCC-----CCccchhHhhcchHHHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHHH
Confidence            348999999999999887     789999999986432 122346799999999999 9999999999886543     4


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +|+++|.|.. +|...+-.-..                 ++.+.+.-+..||++||.|||+.+|+|||||          
T Consensus       132 iYV~TELmQS-DLHKIIVSPQ~-----------------Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC  193 (449)
T KOG0664|consen  132 LYVLTELMQS-DLHKIIVSPQA-----------------LTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC  193 (449)
T ss_pred             HHHHHHHHHh-hhhheeccCCC-----------------CCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc
Confidence            7889999976 88887765544                 8999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccC----Ccccccccccccccccc-CCCCcccceeEe
Q psy12228        215 ---FIGFDLCILVFFHD----STLLKTTSTIASLILRN-QKVSVLLDLIFV  257 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~s~~~Dv~~~  257 (258)
                         |+|||+++.-...+    ...+-|-+|.|||.+.| ..|+.++||-.|
T Consensus       194 vLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSV  244 (449)
T KOG0664|consen  194 ILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSV  244 (449)
T ss_pred             eEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehh
Confidence               89999999755443    24466789999999987 577999998544

>KOG0983|consensus

Probab=99.90  E-value=9.3e-24  Score=168.94  Aligned_cols=160  Identities=13%  Similarity=0.176  Sum_probs=138.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||.|+.|.|+++..+     .++...|||.+.......+.++++..+.++......|+||+.+|+|..+..+++.||.|
T Consensus        99 dlGsGtcG~V~k~~~r-----s~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM  173 (391)
T KOG0983|consen   99 DLGSGTCGQVWKMRFR-----STGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM  173 (391)
T ss_pred             hhcCCCccceEEEEEc-----ccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence            5899999999999998     68899999999887777788899999999888756899999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------ccCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FIGF  218 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~df  218 (258)
                      .. .+..+|++-.                .++++.-+-++...+++||.||..+ +|||||+|             +|||
T Consensus       174 s~-C~ekLlkrik----------------~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDF  236 (391)
T KOG0983|consen  174 ST-CAEKLLKRIK----------------GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDF  236 (391)
T ss_pred             HH-HHHHHHHHhc----------------CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecc
Confidence            65 6777666644                3489999999999999999999875 99999995             7899


Q ss_pred             CcceeeeccC--Ccccccccccccccccc---CCCCcccce
Q psy12228        219 DLCILVFFHD--STLLKTTSTIASLILRN---QKVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~~~--~~~~gt~~y~aPE~~~~---~~~s~~~Dv  254 (258)
                      |++..+....  ...+|.+.|||||.+.-   .+|+.++||
T Consensus       237 GIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDV  277 (391)
T KOG0983|consen  237 GISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADV  277 (391)
T ss_pred             cccceeecccccccccCCccccCccccCCCCCCccchhhhh
Confidence            9998765443  67799999999999864   578888887

>KOG0576|consensus

Probab=99.90  E-value=4.6e-25  Score=194.19  Aligned_cols=159  Identities=19%  Similarity=0.305  Sum_probs=139.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .+|+|+||.||+++..     .++...|+|+++-.. ..+..-...|+-+++.. +|||||.++|.+.....+|+.||||
T Consensus        22 rvgsgTygdvyKaRd~-----~s~elaavkvVkLep-~dd~~~iqqei~~~~dc-~h~nivay~gsylr~dklwicMEyc   94 (829)
T KOG0576|consen   22 RVGSGTYGDVYKARDK-----RSGELAAVKVVKLEP-GDDFSGIQQEIGMLRDC-RHPNIVAYFGSYLRRDKLWICMEYC   94 (829)
T ss_pred             eecCCcccchhhhccc-----ccCchhhheeeeccC-CccccccccceeeeecC-CCcChHHHHhhhhhhcCcEEEEEec
Confidence            7999999999999988     788999999998763 34456677899999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      .+|+|.+..+..+.                 +++.++...++..+.||+|||++|-+|||||             ++|||
T Consensus        95 gggslQdiy~~Tgp-----------------lselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfg  157 (829)
T KOG0576|consen   95 GGGSLQDIYHVTGP-----------------LSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFG  157 (829)
T ss_pred             CCCcccceeeeccc-----------------chhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccC
Confidence            99999998887766                 9999999999999999999999999999995             88999


Q ss_pred             cceeeec---cCCcccccccccccccc---ccCCCCccccee
Q psy12228        220 LCILVFF---HDSTLLKTTSTIASLIL---RNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~---~~~~~~gt~~y~aPE~~---~~~~~s~~~Dv~  255 (258)
                      .+.....   ....+.||++|||||+.   +...|+..+||-
T Consensus       158 vsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiw  199 (829)
T KOG0576|consen  158 VSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIW  199 (829)
T ss_pred             chhhhhhhhhhhhcccCCccccchhHHHHHhccccccccccc
Confidence            8865332   23688999999999996   346888999873

>KOG0671|consensus

Probab=99.89  E-value=2e-23  Score=173.54  Aligned_cols=160  Identities=19%  Similarity=0.235  Sum_probs=140.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCC-----cccceeeeEEcCCcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHI-----NIINLLGVCTQDGPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~-----nIv~l~~~~~~~~~~~l  147 (258)
                      ++|+|.||+|-.+..+     .++..||||+++.  -...++..+-|++++.++..+.     -+|.+.++|.-.++.||
T Consensus        96 ~lGeGtFGkV~ec~D~-----~~~~~vAlKIik~--V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCi  168 (415)
T KOG0671|consen   96 LLGEGTFGKVVECWDR-----ETKEHVALKIIKN--VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICI  168 (415)
T ss_pred             hhcCCcccceEEEeec-----CCCceehHHHHHH--HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEE
Confidence            6899999999999998     4578999999986  3455667788999999994332     46788888988999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      |+|.+. -|+.++|+.+..               .+++...++.++.|++.++.|||+.+++|-|||             
T Consensus       169 vfellG-~S~~dFlk~N~y---------------~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~  232 (415)
T KOG0671|consen  169 VFELLG-LSTFDFLKENNY---------------IPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFK  232 (415)
T ss_pred             EEeccC-hhHHHHhccCCc---------------cccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEE
Confidence            999984 499999998664               569999999999999999999999999999995             


Q ss_pred             --------------------ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 --------------------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --------------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                          ++|||.|.......++.+.|..|.|||++.+-+++.++||=
T Consensus       233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvW  293 (415)
T KOG0671|consen  233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVW  293 (415)
T ss_pred             EeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCce
Confidence                                67999999877777899999999999999999999999974

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.89  E-value=1e-22  Score=172.67  Aligned_cols=161  Identities=19%  Similarity=0.285  Sum_probs=128.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-------
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-------  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-------  143 (258)
                      ..||+|+||.||+|...     .++..+|+|++..... ......+.+|+++++.+ +||||+++++++....       
T Consensus        14 ~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~   87 (311)
T cd07866          14 GKLGEGTFGEVYKARQI-----KTGRVVALKKILMHNEKDGFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSKRKR   87 (311)
T ss_pred             EEeccCCCEEEEEEEEC-----CCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-CCCCccchhhheecccccccccC
Confidence            37999999999999987     5778999999864322 22234577899999999 9999999999875433       


Q ss_pred             -cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------
Q psy12228        144 -PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------  214 (258)
Q Consensus       144 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------  214 (258)
                       .+++|+||+.+ +|...+....                ..+++..+..++.|++.||.|||++|++|+|||        
T Consensus        88 ~~~~lv~~~~~~-~l~~~~~~~~----------------~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~  150 (311)
T cd07866          88 GSVYMVTPYMDH-DLSGLLENPS----------------VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN  150 (311)
T ss_pred             ceEEEEEecCCc-CHHHHHhccc----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence             46999999976 7888776543                238999999999999999999999999999995        


Q ss_pred             -----ccCCCcceeeeccC--------------Ccccccccccccccccc-CCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHD--------------STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--------------~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                           ++|||+++......              ....+++.|+|||++.+ ..++.++||.
T Consensus       151 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  211 (311)
T cd07866         151 QGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIW  211 (311)
T ss_pred             CCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhH
Confidence                 78999887543221              12356788999998865 4578999974

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.89  E-value=2.3e-22  Score=172.74  Aligned_cols=142  Identities=18%  Similarity=0.154  Sum_probs=108.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC----ChHHHHHHHHHHHHHHHhcCCCcccc-eeeeEEcCCcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH----SDAEMMDLVSEMEMMKMIGQHINIIN-LLGVCTQDGPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~nIv~-l~~~~~~~~~~~l  147 (258)
                      .||+|+||.||+|....    .++..||||++....    .......|.+|+++|+.+ +|+||+. ++..    +..++
T Consensus        25 ~IG~G~fg~Vy~a~~~~----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~~----~~~~L   95 (365)
T PRK09188         25 VLKRDVFSTVERGYFAG----DPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLAT----GKDGL   95 (365)
T ss_pred             EEeecCcEEEEEEEEcC----CCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEEc----CCcEE
Confidence            89999999999998761    245678999875331    233456799999999999 9999985 4432    45799


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-c------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-R------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-K------------  214 (258)
                      ||||+++++|.. +.   .                 ..   ...++.|++.||.|||++||+|||| |            
T Consensus        96 VmE~~~G~~L~~-~~---~-----------------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~i  151 (365)
T PRK09188         96 VRGWTEGVPLHL-AR---P-----------------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEA  151 (365)
T ss_pred             EEEccCCCCHHH-hC---c-----------------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCE
Confidence            999999999962 11   1                 11   1467889999999999999999999 7            


Q ss_pred             -ccCCCcceeeeccC-----------CccccccccccccccccCC
Q psy12228        215 -FIGFDLCILVFFHD-----------STLLKTTSTIASLILRNQK  247 (258)
Q Consensus       215 -i~dfgl~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~  247 (258)
                       ++|||+|+......           ....+++.|+|||.+....
T Consensus       152 kLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~  196 (365)
T PRK09188        152 AVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRE  196 (365)
T ss_pred             EEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhh
Confidence             67999998653321           2456788899999987643

>KOG1027|consensus

Probab=99.88  E-value=5.6e-23  Score=185.04  Aligned_cols=162  Identities=22%  Similarity=0.192  Sum_probs=132.3

Q ss_pred             cceeeeeecCce-EEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         69 SQEYVKIKCAFG-KVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        69 ~~~~~ig~G~fg-~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ..+.++|.|+-| .||+|...       ++.||||.+-.+    ......+|+..|+.--.|||||++|+.-.+....||
T Consensus       512 ~~~eilG~Gs~Gt~Vf~G~ye-------~R~VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YI  580 (903)
T KOG1027|consen  512 SPKEILGYGSNGTVVFRGVYE-------GREVAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYI  580 (903)
T ss_pred             ccHHHcccCCCCcEEEEEeeC-------CceehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEE
Confidence            455578899887 68999986       389999998542    223466899999998899999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ..|.|.. +|.+++.......             ........+....|+++||+|||+.+|||||||             
T Consensus       581 alELC~~-sL~dlie~~~~d~-------------~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~  646 (903)
T KOG1027|consen  581 ALELCAC-SLQDLIESSGLDV-------------EMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADG  646 (903)
T ss_pred             EehHhhh-hHHHHHhccccch-------------hhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCc
Confidence            9999987 9999998852100             001114567888999999999999999999996             


Q ss_pred             -----ccCCCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                           |+|||+|+....+.      +...||.+|+|||++....-+.++||.
T Consensus       647 ~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiF  698 (903)
T KOG1027|consen  647 TLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIF  698 (903)
T ss_pred             ceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchh
Confidence                 78999999876553      467899999999999998888899974

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.88  E-value=2.1e-21  Score=156.54  Aligned_cols=162  Identities=27%  Similarity=0.423  Sum_probs=139.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|++|.||++...     .++..+|+|.+.........+.+.+|++.+..+ +|+|++++++++......++++|+
T Consensus         5 ~~i~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~   78 (225)
T smart00221        5 KKLGEGAFGKVYLARDK-----GTGELVAVKVLKKEKTEKQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVMEY   78 (225)
T ss_pred             eEeecCCCeEEEEEEEc-----CCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEec
Confidence            47899999999999987     467899999998653332567899999999999 999999999999988899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....                .+++..+..++.+++.++.|||+++++|+||+             ++||
T Consensus        79 ~~~~~L~~~~~~~~~----------------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~  142 (225)
T smart00221       79 CEGGDLFDYLRKKGG----------------KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADF  142 (225)
T ss_pred             cCCCCHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeC
Confidence            999999999987542                17899999999999999999999999999995             7899


Q ss_pred             CcceeeeccC----Ccccccccccccccc-ccCCCCccccee
Q psy12228        219 DLCILVFFHD----STLLKTTSTIASLIL-RNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~----~~~~gt~~y~aPE~~-~~~~~s~~~Dv~  255 (258)
                      |++.......    ....++..|++||.+ ....++.++||.
T Consensus       143 g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~  184 (225)
T smart00221      143 GLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIW  184 (225)
T ss_pred             ceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHH
Confidence            9988765543    566788899999998 667778888863

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0668|consensus

Probab=99.88  E-value=3.4e-23  Score=161.93  Aligned_cols=153  Identities=16%  Similarity=0.243  Sum_probs=129.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC--cEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~--~~~lv~e  150 (258)
                      ++|+|.|++|+.|...     .+..+++||++++.    ..+.+.+|+.+|..|+.||||++++++..++.  ...||+|
T Consensus        45 k~GRGKYSEVFeg~~~-----~~~eK~ViKiLKPV----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE  115 (338)
T KOG0668|consen   45 KVGRGKYSEVFEGINI-----TNNEKCVIKILKPV----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE  115 (338)
T ss_pred             HHcCccHhhHhccccc-----CCCceEEEeeechH----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence            6899999999999876     46689999999863    23568899999999977999999999998754  5789999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------cc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------FI  216 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i~  216 (258)
                      |..+.+.......                    ++..+++.++.++++||.|+||+||+|||+|              ++
T Consensus       116 ~v~n~Dfk~ly~t--------------------l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlI  175 (338)
T KOG0668|consen  116 YVNNTDFKQLYPT--------------------LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLI  175 (338)
T ss_pred             hhccccHHHHhhh--------------------hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeee
Confidence            9999887766544                    8889999999999999999999999999996              78


Q ss_pred             CCCcceeeeccC--Ccccccccccccccccc-CCCCcccce
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRN-QKVSVLLDL  254 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~s~~~Dv  254 (258)
                      |+|+|...-.+.  +..+.+..|-.||.+.+ +.|+.+-|+
T Consensus       176 DWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~  216 (338)
T KOG0668|consen  176 DWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDM  216 (338)
T ss_pred             ecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHH
Confidence            999998665544  56777888999999865 667777775

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.88  E-value=1.3e-21  Score=159.10  Aligned_cols=155  Identities=25%  Similarity=0.394  Sum_probs=134.9

Q ss_pred             CceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeCCCCCH
Q psy12228         78 AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL  157 (258)
Q Consensus        78 ~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L  157 (258)
                      +||.||+|...     .++..+|+|++.........+.+.+|+..++.+ +|+||+++++++......++++||+++++|
T Consensus         1 ~~g~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L   74 (244)
T smart00220        1 SFGKVYLARDK-----KTGKLVAIKVIKKEKIKKKRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDL   74 (244)
T ss_pred             CceEEEEEEEC-----CCCcEEEEEEecccccccHHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCH
Confidence            58999999987     467899999997653333267899999999999 999999999999998899999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCcceee
Q psy12228        158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILV  224 (258)
Q Consensus       158 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~  224 (258)
                      .+++.....                 +++..+..++.+++.++.|||+.+++|+||+             ++|||++...
T Consensus        75 ~~~~~~~~~-----------------~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~  137 (244)
T smart00220       75 FDLLKKRGR-----------------LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQL  137 (244)
T ss_pred             HHHHHhccC-----------------CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeee
Confidence            999987543                 8999999999999999999999999999994             7899998876


Q ss_pred             ecc--CCccccccccccccccccCCCCccccee
Q psy12228        225 FFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       225 ~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ...  .....++..|+|||.+.+..++.++||.
T Consensus       138 ~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~  170 (244)
T smart00220      138 DPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVW  170 (244)
T ss_pred             ccccccccccCCcCCCCHHHHccCCCCchhhHH
Confidence            553  2456788899999999988899999985

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.87  E-value=3.2e-21  Score=172.33  Aligned_cols=177  Identities=14%  Similarity=0.033  Sum_probs=118.4

Q ss_pred             cceeeeeecCceEEEEEEEcccc-----------cCCceEEEEEEEecCCCChHHHH--------------HHHHHHHHH
Q psy12228         69 SQEYVKIKCAFGKVICAEANGIL-----------KQGIITTVAVKMLKEGHSDAEMM--------------DLVSEMEMM  123 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~-----------~~~~~~~vavK~~~~~~~~~~~~--------------~~~~E~~~l  123 (258)
                      ....+||+|+||.||+|......           ....++.||||.++... ....+              .+..|+.++
T Consensus       148 ~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~-~~~~~~fl~e~~~~~~~~e~~~vE~~~l  226 (507)
T PLN03224        148 QLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDR-QGVRQDFLKTGTLAKGSAETGMVEAYMC  226 (507)
T ss_pred             eEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccc-hhhHHHHHhhhhhhhcccchhHHHHHHH
Confidence            34458999999999999753111           12345789999997532 11222              234577777


Q ss_pred             HHhcCCCc-----ccceeeeEEc--------CCcEEEEEEeCCCCCHHHHHhhcCCCCCC--CCC--CCC---CCCCCCC
Q psy12228        124 KMIGQHIN-----IINLLGVCTQ--------DGPLYVIVEFAPHGNLRDFLRKHRPSSGY--ESP--LGS---AYTNGNV  183 (258)
Q Consensus       124 ~~l~~h~n-----Iv~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~--~~~--~~~---~~~~~~~  183 (258)
                      .++ +|.+     +++++++|..        .+..+|||||+++|+|.++|.........  +..  .+.   .......
T Consensus       227 ~~l-~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~  305 (507)
T PLN03224        227 AKI-KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK  305 (507)
T ss_pred             HHh-hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence            788 5554     3677777753        34689999999999999999864321000  000  000   0011234


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCcceeeeccC----CccccccccccccccccC
Q psy12228        184 LTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILVFFHD----STLLKTTSTIASLILRNQ  246 (258)
Q Consensus       184 l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~  246 (258)
                      +++..+..++.|++.||.|||+++|+|||||             ++|||++.......    ....+|+.|+|||.+...
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~  385 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMP  385 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCC
Confidence            6788899999999999999999999999996             78999987543221    122347899999998654


Q ss_pred             C
Q psy12228        247 K  247 (258)
Q Consensus       247 ~  247 (258)
                      .
T Consensus       386 ~  386 (507)
T PLN03224        386 Q  386 (507)
T ss_pred             C
Confidence            3

>KOG1167|consensus

Probab=99.87  E-value=2e-22  Score=169.40  Aligned_cols=162  Identities=17%  Similarity=0.208  Sum_probs=134.7

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...++||+|.|+.||++.....  ....+.||+|.+.....   ..++.+|+++|..++.+.||+++.+++..++.+++|
T Consensus        39 ~~v~kigeGsFssv~~a~~~~~--~~~~~~valk~i~~ts~---p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv  113 (418)
T KOG1167|consen   39 KVVNKIGEGSFSSVYKATDIEQ--DTKRRYVALKAIYRTSS---PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV  113 (418)
T ss_pred             hhhccccccchhhhhhhhHhhh--ccccceEeeeecccccC---chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence            4455899999999999998631  23568999999976433   345889999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------  214 (258)
                      +||+++-+-.+++..                    ++...+..+++.++.||.|+|.+||||||||              
T Consensus       114 lp~~~H~~f~~l~~~--------------------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~  173 (418)
T KOG1167|consen  114 LPYFEHDRFRDLYRS--------------------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGV  173 (418)
T ss_pred             ecccCccCHHHHHhc--------------------CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCce
Confidence            999999888888876                    7889999999999999999999999999998              


Q ss_pred             ccCCCcceee-----------------ec--c----------------------------CCccccccccccccccccC-
Q psy12228        215 FIGFDLCILV-----------------FF--H----------------------------DSTLLKTTSTIASLILRNQ-  246 (258)
Q Consensus       215 i~dfgl~~~~-----------------~~--~----------------------------~~~~~gt~~y~aPE~~~~~-  246 (258)
                      ++|||+|...                 ..  +                            ...++||++|.|||++... 
T Consensus       174 LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~  253 (418)
T KOG1167|consen  174 LVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP  253 (418)
T ss_pred             EEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc
Confidence            6788988610                 00  0                            0156899999999998764 


Q ss_pred             CCCccccee
Q psy12228        247 KVSVLLDLI  255 (258)
Q Consensus       247 ~~s~~~Dv~  255 (258)
                      .-++++||-
T Consensus       254 ~QttaiDiw  262 (418)
T KOG1167|consen  254 RQTTAIDIW  262 (418)
T ss_pred             CcCCcccee
Confidence            448889874

>KOG1345|consensus

Probab=99.86  E-value=2.2e-22  Score=160.96  Aligned_cols=159  Identities=19%  Similarity=0.242  Sum_probs=129.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceee-eEEcCCcEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG-VCTQDGPLYVIV  149 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~-~~~~~~~~~lv~  149 (258)
                      +..+|+|.||++.+++++     .+...+++|.+....  ....+|.+|...---|+.|.||+.-|+ .|++.+.+.+++
T Consensus        29 ~k~lgeG~FgkIlL~eHr-----~s~t~ivlKavp~p~--tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   29 NKQLGEGRFGKILLAEHR-----QSKTRIVLKAVPRPQ--TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             HHHhcccceeeEEeeecc-----CCceEEEeeccCcch--hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            447999999999999998     677899999997642  335679999988777889999998775 566777888999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------  214 (258)
                      ||+|.|+|..-+...+                  +.+..-..++.|+++|+.|||++++||||||               
T Consensus       102 E~aP~gdL~snv~~~G------------------igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvK  163 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEAAG------------------IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVK  163 (378)
T ss_pred             ccCccchhhhhcCccc------------------ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEE
Confidence            9999999998776644                  7888899999999999999999999999995               


Q ss_pred             ccCCCcceeeeccCCcccccccccccccccc---C--CCCcccce
Q psy12228        215 FIGFDLCILVFFHDSTLLKTTSTIASLILRN---Q--KVSVLLDL  254 (258)
Q Consensus       215 i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~---~--~~s~~~Dv  254 (258)
                      ++|||+++.....-...-.+..|-|||....   +  ..++.+||
T Consensus       164 lcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~  208 (378)
T KOG1345|consen  164 LCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDI  208 (378)
T ss_pred             eeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccc
Confidence            7899999865444445555677899998643   2  23566774

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.86  E-value=1e-20  Score=150.11  Aligned_cols=160  Identities=26%  Similarity=0.449  Sum_probs=135.2

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeCC
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAP  153 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~  153 (258)
                      ||+|.+|.||++...     .++..+++|++.........+.+.+|+..++.+ .|++|+++++++......++++|+++
T Consensus         1 l~~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~~   74 (215)
T cd00180           1 LGEGGFGTVYLARDK-----KTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYCE   74 (215)
T ss_pred             CCcCCceEEEEEEec-----CCCcEEEEEEeccccchhHHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecCC
Confidence            689999999999986     457899999998653332456799999999999 99999999999999889999999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------ccCCC
Q psy12228        154 HGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------FIGFD  219 (258)
Q Consensus       154 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i~dfg  219 (258)
                      +++|.+++.....                .+++..+..++.+++.++.|||+++++|+||+              ++|||
T Consensus        75 ~~~l~~~~~~~~~----------------~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~  138 (215)
T cd00180          75 GGSLKDLLKENEG----------------KLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFG  138 (215)
T ss_pred             CCcHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCC
Confidence            8999999987521                28999999999999999999999999999985              56788


Q ss_pred             cceeeecc---CCccccccccccccccccC-CCCccccee
Q psy12228        220 LCILVFFH---DSTLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      .+......   .....+...|++||.+... .++.++|+.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~  178 (215)
T cd00180         139 LSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIW  178 (215)
T ss_pred             ceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhH
Confidence            77755443   2446677899999999887 778888874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0603|consensus

Probab=99.86  E-value=2.5e-22  Score=176.72  Aligned_cols=155  Identities=18%  Similarity=0.210  Sum_probs=132.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..+|.|+|+.|-.+...     .+....++|++.....     +..+|+.++...++||||+++.+.+.++...|+|||.
T Consensus       328 ~~~~~gs~s~~~~~~~~-----~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~  397 (612)
T KOG0603|consen  328 EELGEGSFSAVKYCESS-----PTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL  397 (612)
T ss_pred             cccCCCCccceeeeecc-----ccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence            35899999999999987     6788999999976522     2346888888888999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i~d  217 (258)
                      +.+|-|.+.+.....                 +. ..+..|+.+|+.|+.|||++||||||||              ++|
T Consensus       398 l~g~ell~ri~~~~~-----------------~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrlty  459 (612)
T KOG0603|consen  398 LDGGELLRRIRSKPE-----------------FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTY  459 (612)
T ss_pred             ccccHHHHHHHhcch-----------------hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEE
Confidence            999988888877553                 34 7888999999999999999999999996              678


Q ss_pred             CCcceeeeccCCccccccccccccccccCCCCcccce
Q psy12228        218 FDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       218 fgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      ||+++.....-.+.+-|..|.|||++....|++++||
T Consensus       460 FG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~  496 (612)
T KOG0603|consen  460 FGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDW  496 (612)
T ss_pred             echhhhCchhhcccchhhcccChhhhccCCCCcchhh
Confidence            8888865544345677889999999999999999997

>KOG1024|consensus

Probab=99.85  E-value=7.7e-22  Score=164.85  Aligned_cols=172  Identities=22%  Similarity=0.234  Sum_probs=143.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-CcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-GPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-~~~~lv~e~  151 (258)
                      ++-+|.||+||.|.|+.-..-.+.+.|-+|.++...+.-+...++.|...+..+ .|||+..+.+++..+ ...++++.+
T Consensus       291 llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~-sH~nll~V~~V~ie~~~~P~V~y~~  369 (563)
T KOG1024|consen  291 LLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA-SHPNLLSVLGVSIEDYATPFVLYPA  369 (563)
T ss_pred             hhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC-cCCCccceeEEEeeccCcceEEEec
Confidence            567999999999988732222344678899999888888889999999999999 899999999998754 467889999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-------------cccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-------------RFIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-------------Ki~df  218 (258)
                      +.-|+|+.||...+.         +.....+.++..++..++.|++.||+|||+++|||.||             |++|=
T Consensus       370 ~~~gNLK~FL~~Cr~---------~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDs  440 (563)
T KOG1024|consen  370 TGVGNLKSFLQICRG---------DDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDS  440 (563)
T ss_pred             cCcchHHHHHHHhcc---------CCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccc
Confidence            999999999996543         12233456899999999999999999999999999999             68888


Q ss_pred             CcceeeeccCCcccc-----ccccccccccccCCCCcccce
Q psy12228        219 DLCILVFFHDSTLLK-----TTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~~~~~~~g-----t~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      .+++..+..+....|     ...||+||.+.+..|+.++||
T Consensus       441 aLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDv  481 (563)
T KOG1024|consen  441 ALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDV  481 (563)
T ss_pred             hhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhh
Confidence            899887777644444     367999999999999999997

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.85  E-value=9.9e-21  Score=172.58  Aligned_cols=170  Identities=12%  Similarity=0.034  Sum_probs=107.3

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeee------EEcC
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV------CTQD  142 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~------~~~~  142 (258)
                      .....||+|+||.||+|....... ..+..||+|.+.....   .+.+..|  .+... .+.+++.+...      +...
T Consensus       135 ~l~~~LG~G~FG~VYka~~~~~~~-~~~~~vAvK~~~~~~~---~e~~~~e--~l~~~-~~~~~~~~~~~~~~~~~~~~~  207 (566)
T PLN03225        135 VLGKKLGEGAFGVVYKASLVNKQS-KKEGKYVLKKATEYGA---VEIWMNE--RVRRA-CPNSCADFVYGFLEPVSSKKE  207 (566)
T ss_pred             EEeEEEeeCCCeEEEEEEEcCCcc-ccCcEEEEEEecccch---hHHHHHH--HHHhh-chhhHHHHHHhhhcccccccC
Confidence            344589999999999999872100 1178999999864321   1112222  12222 23333332222      2345


Q ss_pred             CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----
Q psy12228        143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGS---AYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----  214 (258)
Q Consensus       143 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----  214 (258)
                      ...++|+||+++++|.+++......-..+.....   ............+..++.||+.||.|||+++|+|||||     
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL  287 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII  287 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence            6799999999999999999764321000000000   00011112345567899999999999999999999996     


Q ss_pred             ---------ccCCCcceeeecc----CCcccccccccccccccc
Q psy12228        215 ---------FIGFDLCILVFFH----DSTLLKTTSTIASLILRN  245 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~----~~~~~gt~~y~aPE~~~~  245 (258)
                               ++|||+++.....    .....+++.|+|||.+..
T Consensus       288 l~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~  331 (566)
T PLN03225        288 FSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIM  331 (566)
T ss_pred             EeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhc
Confidence                     7899999854332    246788999999997643

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.82  E-value=4.5e-20  Score=145.96  Aligned_cols=127  Identities=17%  Similarity=0.061  Sum_probs=95.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-HH------------------------HHHHHHHHHHHHHh
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-AE------------------------MMDLVSEMEMMKMI  126 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~------------------------~~~~~~E~~~l~~l  126 (258)
                      ..||+|+||.||+|...      ++..||||+++..... ..                        ......|+.++..+
T Consensus         3 ~~ig~G~~~~Vy~a~~~------~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   76 (190)
T cd05147           3 GCISTGKEANVYHATTA------NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL   76 (190)
T ss_pred             CccccccceEEEEEECC------CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            37999999999999874      5789999999754211 00                        11224599999999


Q ss_pred             cCCCcccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-hh
Q psy12228        127 GQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYL-QS  205 (258)
Q Consensus       127 ~~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yL-H~  205 (258)
                       .++++.....+.. . ..+|||||++++++...+.....                 +++..+..++.|++.+|.|| |+
T Consensus        77 -~~~~v~~p~~~~~-~-~~~iVmE~i~g~~l~~~~~~~~~-----------------~~~~~~~~i~~qi~~~L~~l~H~  136 (190)
T cd05147          77 -VTAGIPCPEPILL-K-SHVLVMEFIGDDGWAAPRLKDAP-----------------LSESKARELYLQVIQIMRILYQD  136 (190)
T ss_pred             -HHCCCCCCcEEEe-c-CCEEEEEEeCCCCCcchhhhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHh
Confidence             7877744333322 2 23899999998877655433333                 88999999999999999999 79


Q ss_pred             CCccccCcc------------ccCCCcceee
Q psy12228        206 RKVGNDAVR------------FIGFDLCILV  224 (258)
Q Consensus       206 ~~iiH~DlK------------i~dfgl~~~~  224 (258)
                      .||+|||||            ++|||+|...
T Consensus       137 ~giiHrDlkP~NIli~~~~v~LiDFG~a~~~  167 (190)
T cd05147         137 CRLVHADLSEYNLLYHDGKLYIIDVSQSVEH  167 (190)
T ss_pred             CCcccCCCCHHHEEEECCcEEEEEccccccC
Confidence            999999996            6799988753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0670|consensus

Probab=99.82  E-value=2.5e-20  Score=160.71  Aligned_cols=163  Identities=19%  Similarity=0.208  Sum_probs=137.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcC-----CCcccceeeeEEcCCcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ-----HINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-----h~nIv~l~~~~~~~~~~~l  147 (258)
                      ..|+|-|+.|..|...     ..+..||||+|.+.  +--.+.=++|+++|++|..     --|+++++..|...+++||
T Consensus       439 ~~GkGvFs~Vvra~D~-----~r~~~vAiKIIRnN--E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl  511 (752)
T KOG0670|consen  439 YTGKGVFSTVVRARDQ-----ARGQEVAIKIIRNN--EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL  511 (752)
T ss_pred             ccccceeeeeeecccc-----CCCCeeEEEEeecc--hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence            3589999999999987     45679999999863  3333556789999999932     2489999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      |+|-+.. +|.+.|++.+..              ..|....+..|+.|+..||..|..+||+|.|||             
T Consensus       512 VFE~Lsl-NLRevLKKyG~n--------------vGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iL  576 (752)
T KOG0670|consen  512 VFEPLSL-NLREVLKKYGRN--------------VGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNIL  576 (752)
T ss_pred             Eehhhhc-hHHHHHHHhCcc--------------cceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCccee
Confidence            9999976 999999998863              348999999999999999999999999999995             


Q ss_pred             -ccCCCcceeeeccC-CccccccccccccccccCCCCcccceeEe
Q psy12228        215 -FIGFDLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLIFV  257 (258)
Q Consensus       215 -i~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~~~  257 (258)
                       |||||.|....... ..+.-+..|.|||++.|-+|+...|+-.|
T Consensus       577 KLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSv  621 (752)
T KOG0670|consen  577 KLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSV  621 (752)
T ss_pred             eeccCccccccccccccHHHHHHhccCcceeecCcccCCccceee
Confidence             89999998765554 45566788999999999999999997554

>KOG1290|consensus

Probab=99.81  E-value=2.4e-19  Score=153.53  Aligned_cols=123  Identities=15%  Similarity=0.156  Sum_probs=104.0

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC-------CcccceeeeEEcC-
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH-------INIINLLGVCTQD-  142 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-------~nIv~l~~~~~~~-  142 (258)
                      ..+||-|-|++||+|...     ...+.||+|+.+.  .....+..+.||++|++++.+       .+||+|++.|... 
T Consensus        83 ~rKLGWGHFSTVWLawDt-----q~~r~VAlKVvKS--AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   83 QRKLGWGHFSTVWLAWDT-----QNKRYVALKVVKS--AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             EEeccccccceeEEEeec-----cCCeEEEEEEEeh--hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            448999999999999987     5678999999985  233446788999999998644       3799999999754 


Q ss_pred             ---CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcccc
Q psy12228        143 ---GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVRFI  216 (258)
Q Consensus       143 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlKi~  216 (258)
                         .++|||+|++-. +|..+|+....               +.++...+..|+.||+.||.|||.. ||||-|||+-
T Consensus       156 pNG~HVCMVfEvLGd-nLLklI~~s~Y---------------rGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPE  217 (590)
T KOG1290|consen  156 PNGQHVCMVFEVLGD-NLLKLIKYSNY---------------RGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPE  217 (590)
T ss_pred             CCCcEEEEEehhhhh-HHHHHHHHhCC---------------CCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcc
Confidence               369999999955 99999998765               4599999999999999999999985 9999999743

>KOG1163|consensus

Probab=99.80  E-value=1.9e-19  Score=141.99  Aligned_cols=172  Identities=16%  Similarity=0.117  Sum_probs=136.1

Q ss_pred             eeeeeceeeeccceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceee
Q psy12228         58 SLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG  137 (258)
Q Consensus        58 ~~~~~~~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~  137 (258)
                      +..++........-.+||+|+||.+|.|...     ..|..||||+-+.....   .++..|..+.+.++.-..|..+..
T Consensus         7 s~~~~iv~gky~lvrkiGsGSFGdIy~~~~i-----~~ge~VAiK~Es~~a~h---pqL~yEskvY~iL~~g~GiP~i~~   78 (341)
T KOG1163|consen    7 SLEELIVGGKYKLVRKIGSGSFGDIYLGISI-----TSGEEVAIKLESSKAKH---PQLLYESKVYRILQGGVGIPHIRH   78 (341)
T ss_pred             chhhheeccceEEEEeecCCchhheeeeeec-----cCCceEEEEeecccCCC---cchhHHHHHHHHhccCCCCchhhh
Confidence            3444444444444558999999999999987     68899999988654332   347789999999966688888888


Q ss_pred             eEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---
Q psy12228        138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---  214 (258)
Q Consensus       138 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---  214 (258)
                      +..+...-.+||+.+ |.+|.+.+.-+..                .++..+++.++-|++.-++|+|.+++||||||   
T Consensus        79 y~~e~~ynvlVMdLL-GPsLEdLfnfC~R----------------~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdN  141 (341)
T KOG1163|consen   79 YGTEKDYNVLVMDLL-GPSLEDLFNFCSR----------------RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDN  141 (341)
T ss_pred             hccccccceeeeecc-CccHHHHHHHHhh----------------hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccc
Confidence            888888889999988 5699998876543                38999999999999999999999999999998   


Q ss_pred             -------------ccCCCcceeeecc----------CCccccccccccccccccCCCCcccce
Q psy12228        215 -------------FIGFDLCILVFFH----------DSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 -------------i~dfgl~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                                   ++|||+|+.+...          +...+||.+|.+--...+..-+.+.|+
T Consensus       142 FLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDm  204 (341)
T KOG1163|consen  142 FLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDM  204 (341)
T ss_pred             eeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhh
Confidence                         6899999875432          246789999988766655555555553

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.78  E-value=3.9e-18  Score=135.08  Aligned_cols=127  Identities=15%  Similarity=0.063  Sum_probs=96.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-----------------------H--HHHHHHHHHHHHHHhc
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-----------------------A--EMMDLVSEMEMMKMIG  127 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----------------------~--~~~~~~~E~~~l~~l~  127 (258)
                      .||+|+||.||+|...      +|..||||+++.....                       .  ....+..|...+.++ 
T Consensus         4 ~ig~G~~~~Vy~a~~~------~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-   76 (190)
T cd05145           4 CISTGKEANVYHARTG------DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-   76 (190)
T ss_pred             eeecCCCcEEEEEEcC------CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-
Confidence            7999999999999864      5789999999764211                       0  012346789999999 


Q ss_pred             CCCcccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-C
Q psy12228        128 QHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-R  206 (258)
Q Consensus       128 ~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~  206 (258)
                      .|++|.....+....  .+|||||++++++.........                 ++......++.|++.+|.+||+ +
T Consensus        77 ~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~-----------------~~~~~~~~i~~~l~~~l~~lH~~~  137 (190)
T cd05145          77 YEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVP-----------------LEEEEAEELYEQVVEQMRRLYQEA  137 (190)
T ss_pred             HhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhhcc-----------------CCHHHHHHHHHHHHHHHHHHHHhC
Confidence            899875544443332  4899999998765443222222                 7888999999999999999999 9


Q ss_pred             CccccCcc------------ccCCCcceeee
Q psy12228        207 KVGNDAVR------------FIGFDLCILVF  225 (258)
Q Consensus       207 ~iiH~DlK------------i~dfgl~~~~~  225 (258)
                      ||+|||||            ++|||++....
T Consensus       138 givHrDlkP~NIll~~~~~~liDFG~a~~~~  168 (190)
T cd05145         138 GLVHGDLSEYNILYHDGKPYIIDVSQAVELD  168 (190)
T ss_pred             CEecCCCChhhEEEECCCEEEEEcccceecC
Confidence            99999996            67888887543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0665|consensus

Probab=99.77  E-value=1.4e-19  Score=147.70  Aligned_cols=156  Identities=21%  Similarity=0.232  Sum_probs=124.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------cE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------PL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------~~  145 (258)
                      .+|.|.- .|-.+...     -.++.||+|.+.... .....++..+|+.++..+ .|+||++++.++....      .+
T Consensus        24 p~~~g~~-~v~~a~D~-----v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~~~e~   96 (369)
T KOG0665|consen   24 PIGSGAQ-IVVAAFDQ-----VLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEEFQEV   96 (369)
T ss_pred             ccCCCCc-eEEecchh-----hccCceehhhhcCccccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHHHHhH
Confidence            3455555 44444443     466889999885332 222345678999999999 9999999999997543      58


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      |+|||+|.. +|.+.+...                   ++-..+..+..|++.|+.|||+.||+|||||           
T Consensus        97 y~v~e~m~~-nl~~vi~~e-------------------lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~  156 (369)
T KOG0665|consen   97 YLVMELMDA-NLCQVILME-------------------LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCT  156 (369)
T ss_pred             HHHHHhhhh-HHHHHHHHh-------------------cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhh
Confidence            999999986 999998832                   7888999999999999999999999999996           


Q ss_pred             --ccCCCcceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        +.|||+|+.....  .+.++.|..|.|||++.+..|.+.+||=
T Consensus       157 lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiw  201 (369)
T KOG0665|consen  157 LKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIW  201 (369)
T ss_pred             eeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhh
Confidence              7899999864433  3567888999999999998899999974

>KOG1164|consensus

Probab=99.76  E-value=6.1e-18  Score=144.71  Aligned_cols=165  Identities=15%  Similarity=0.128  Sum_probs=128.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhc---CCCcccceeeeE-EcCCcEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG---QHINIINLLGVC-TQDGPLY  146 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---~h~nIv~l~~~~-~~~~~~~  146 (258)
                      ...||+|+||.||.+.....    ....+|+|+.......... .+..|..++..+.   ..+++..+++.. .....-+
T Consensus        23 ~~~iG~G~fG~V~~v~~~~~----~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   23 GKKIGEGGFGAVYLVSDKSE----KNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             eeeccccCCceEEEEEecCC----CCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence            34899999999999998621    1367899988654222222 5778899999884   236888898888 4677889


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||+.+ |.+|.++......               ..++......++.|++.+|.+||+.|++|||||            
T Consensus        98 iVM~l~-G~sL~dl~~~~~~---------------~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~  161 (322)
T KOG1164|consen   98 IVMSLL-GPSLEDLRKRNPP---------------GRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRS  161 (322)
T ss_pred             EEEecc-CccHHHHHHhCCC---------------CCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCc
Confidence            999988 4599998766542               349999999999999999999999999999997            


Q ss_pred             ------ccCCCcceeee--cc-----------CCccccccccccccccccCCCCcccceeE
Q psy12228        215 ------FIGFDLCILVF--FH-----------DSTLLKTTSTIASLILRNQKVSVLLDLIF  256 (258)
Q Consensus       215 ------i~dfgl~~~~~--~~-----------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~~  256 (258)
                            +.|||+++...  ..           .....||.+|.++.+-.+...+.+.|+-.
T Consensus       162 ~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles  222 (322)
T KOG1164|consen  162 EVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLES  222 (322)
T ss_pred             ccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhh
Confidence                  56999998321  11           12456999999999999999999988743

>PRK10345 hypothetical protein; Provisional

Probab=99.75  E-value=1.1e-17  Score=133.76  Aligned_cols=118  Identities=15%  Similarity=0.184  Sum_probs=90.3

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhc----CCCcccceeeeEEcCC--
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG----QHINIINLLGVCTQDG--  143 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~nIv~l~~~~~~~~--  143 (258)
                      ...+||+|+||.||.  +.     .+... +||++.... ....+.+.+|+.+++.+.    .||||++++|++.++.  
T Consensus         6 ~~~~LG~G~~~~Vy~--hp-----~~~~k-~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~   76 (210)
T PRK10345          6 EQSPLGTGRHRKCYA--HP-----EDAQR-CIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT   76 (210)
T ss_pred             CcceecCCCceEEEE--CC-----CCcCe-EEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC
Confidence            344899999999995  33     23344 699887542 234567999999999993    3699999999999863  


Q ss_pred             -c-EEEEEEe--CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHhhCCccccCcccc
Q psy12228        144 -P-LYVIVEF--APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGM-HYLQSRKVGNDAVRFI  216 (258)
Q Consensus       144 -~-~~lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl-~yLH~~~iiH~DlKi~  216 (258)
                       . +.+|+||  +++|+|.+++.+..                  +++.  ..++.|++.++ +|||+++|+|||||+.
T Consensus        77 g~v~~~I~e~~G~~~~tL~~~l~~~~------------------~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~  134 (210)
T PRK10345         77 GYVYDVIADFDGKPSITLTEFAEQCR------------------YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQ  134 (210)
T ss_pred             eEEEEEEecCCCCcchhHHHHHHccc------------------ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHH
Confidence             3 3378999  56899999997632                  5555  35678888888 9999999999999843

>KOG1165|consensus

Probab=99.74  E-value=5.7e-18  Score=139.24  Aligned_cols=160  Identities=14%  Similarity=0.109  Sum_probs=135.2

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      .-..+||+|+||..+.|+..     -++..||||.-...   .+..++..|....+.|+..+.|..+|.+...+.+-.||
T Consensus        31 rVGkKIGeGsFG~lf~G~Nl-----~nne~VAIKfEPrk---S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV  102 (449)
T KOG1165|consen   31 RVGKKIGEGSFGVLFLGKNL-----YNNEPVAIKFEPRK---SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV  102 (449)
T ss_pred             eeccccccCcceeeeccccc-----ccCceEEEEecccc---CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence            45568999999999999976     56799999976432   23456788999999998889999999988888888999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------  214 (258)
                      +|++ |.+|.++..-++.                .++...++.+|.|++.-++|+|++.+|.||||              
T Consensus       103 idLL-GPSLEDLFD~CgR----------------~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~  165 (449)
T KOG1165|consen  103 IDLL-GPSLEDLFDLCGR----------------RFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDA  165 (449)
T ss_pred             hhhh-CcCHHHHHHHhcC----------------cccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCC
Confidence            9998 5699998877664                39999999999999999999999999999998              


Q ss_pred             ----ccCCCcceeeeccC----------CccccccccccccccccCCCCcccc
Q psy12228        215 ----FIGFDLCILVFFHD----------STLLKTTSTIASLILRNQKVSVLLD  253 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~s~~~D  253 (258)
                          ++|||+|+.+....          ....||.+||+--.-.|..-|.+.|
T Consensus       166 n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDD  218 (449)
T KOG1165|consen  166 NVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDD  218 (449)
T ss_pred             ceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhh
Confidence                68999999765542          4789999999988877777777766

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.73  E-value=1.2e-16  Score=134.57  Aligned_cols=160  Identities=25%  Similarity=0.389  Sum_probs=133.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH--HHHHHHHHHHHHHHhcCCC-cccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA--EMMDLVSEMEMMKMIGQHI-NIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~~h~-nIv~l~~~~~~~~~~~lv~  149 (258)
                      .||.|+||.||++...        ..+++|.+.......  ....+.+|+..+..+ .|+ +|+.+.+.+......++++
T Consensus         7 ~l~~g~~~~v~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~   77 (384)
T COG0515           7 KLGEGSFGEVYLARDR--------KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGSLYLVM   77 (384)
T ss_pred             eecCCCCeEEEEEEec--------cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCEEEEEE
Confidence            6889999999999986        788999997654333  467899999999999 666 7999999997777789999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------c
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------F  215 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i  215 (258)
                      +++.++++.+++......              ..++......++.|++.++.|+|+.+++|||+|              +
T Consensus        78 ~~~~~~~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l  143 (384)
T COG0515          78 EYVDGGSLEDLLKKIGRK--------------GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKL  143 (384)
T ss_pred             ecCCCCcHHHHHHhcccc--------------cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEE
Confidence            999999999777765410              138999999999999999999999999999996              5


Q ss_pred             cCCCcceeeecc---------CCcccccccccccccccc---CCCCccccee
Q psy12228        216 IGFDLCILVFFH---------DSTLLKTTSTIASLILRN---QKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~---------~~~~~gt~~y~aPE~~~~---~~~s~~~Dv~  255 (258)
                      +|||+++.....         .....||..|+|||.+.+   ..++..+|+.
T Consensus       144 ~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~  195 (384)
T COG0515         144 IDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIW  195 (384)
T ss_pred             eccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHH
Confidence            799998754433         257789999999999988   5678888863

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.69  E-value=4.9e-16  Score=124.86  Aligned_cols=122  Identities=10%  Similarity=0.097  Sum_probs=99.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--h-----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--D-----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~-----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~  145 (258)
                      .||+|++|.||+|...       +..|++|+......  .     .....+.+|+.++..+ .|++|.....++.+....
T Consensus         3 ~l~~G~~~~vy~~~~~-------~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~   74 (211)
T PRK14879          3 LIKRGAEAEIYLGDFL-------GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENF   74 (211)
T ss_pred             ccccCceEEEEEEeeC-------CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCC
Confidence            6899999999999874       36789998754321  1     1124688999999999 899988877777777788


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +++|||++|++|.+++...                    .. ....++.+++.+|.+||+.+++|+|++           
T Consensus        75 ~lv~e~~~G~~L~~~~~~~--------------------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~~~~~  133 (211)
T PRK14879         75 IIVMEYIEGEPLKDLINSN--------------------GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILSGGKI  133 (211)
T ss_pred             EEEEEEeCCcCHHHHHHhc--------------------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEECCCE
Confidence            9999999999999988642                    22 788999999999999999999999996           


Q ss_pred             -ccCCCccee
Q psy12228        215 -FIGFDLCIL  223 (258)
Q Consensus       215 -i~dfgl~~~  223 (258)
                       ++|||++..
T Consensus       134 ~liDf~~a~~  143 (211)
T PRK14879        134 YLIDFGLAEF  143 (211)
T ss_pred             EEEECCcccC
Confidence             578887764

>KOG1166|consensus

Probab=99.67  E-value=1.1e-16  Score=149.95  Aligned_cols=157  Identities=15%  Similarity=0.165  Sum_probs=123.9

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcC---CCcccceeeeEEcCCcEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ---HINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~---h~nIv~l~~~~~~~~~~~l  147 (258)
                      ...||+|+||.||.|...      +++.||+|+-+.....+.    .--.+++.+| +   -+.|..+..++...+.-+|
T Consensus       703 ~~e~G~g~y~~vy~a~~~------~~~~~alK~e~P~~~WEf----YI~~q~~~RL-k~~~~~~~~~~~~a~~~~~~S~l  771 (974)
T KOG1166|consen  703 SKEIGEGSYGSVYVATHS------NGKLVALKVEKPPNPWEF----YICLQVMERL-KPQMLPSIMHISSAHVFQNASVL  771 (974)
T ss_pred             EeeeccccceEEEEeecC------CCcEEEEEeecCCCceee----eehHHHHHhh-chhhhcchHHHHHHHccCCccee
Confidence            347899999999999986      389999999887644321    1112233333 2   2445666666666666789


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      |+||.+.|+|.+++...+.                 ++|...+.++.|++..+++||..+|||+|||             
T Consensus       772 v~ey~~~Gtlld~~N~~~~-----------------m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~  834 (974)
T KOG1166|consen  772 VSEYSPYGTLLDLINTNKV-----------------MDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICAD  834 (974)
T ss_pred             eeeccccccHHHhhccCCC-----------------CCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCC
Confidence            9999999999999985544                 9999999999999999999999999999997             


Q ss_pred             -------ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 -------FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -------i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                             |+|||-+..+..-.     ...++|-.+-.+|+..|++++..+|..
T Consensus       835 ~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~Dyf  887 (974)
T KOG1166|consen  835 SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYF  887 (974)
T ss_pred             CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhH
Confidence                   78999887654432     367888999999999999999999853

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.66  E-value=6e-16  Score=123.27  Aligned_cols=119  Identities=9%  Similarity=0.061  Sum_probs=92.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--C-h----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--S-D----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~-~----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~  145 (258)
                      .||+|+||.||+|.+.       +..|++|+.....  . .    ....++.+|+.++..+ .|+++.....++...+..
T Consensus         1 ~ig~G~~~~vy~~~~~-------~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~   72 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-------GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNK   72 (199)
T ss_pred             CCCCCceEEEEEeecC-------CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCC
Confidence            4799999999999864       3679999865321  1 1    1235678999999999 887766555555566677


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +++|||+++++|.+++....                  .      .++.+++.+|.+||+.+++|+|++           
T Consensus        73 ~lv~e~~~g~~l~~~~~~~~------------------~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~~~~~  128 (199)
T TIGR03724        73 TIVMEYIEGKPLKDVIEEGN------------------D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVRDDKL  128 (199)
T ss_pred             EEEEEEECCccHHHHHhhcH------------------H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEECCcE
Confidence            99999999999998875421                  1      789999999999999999999996           


Q ss_pred             -ccCCCccee
Q psy12228        215 -FIGFDLCIL  223 (258)
Q Consensus       215 -i~dfgl~~~  223 (258)
                       ++|||++..
T Consensus       129 ~liDfg~a~~  138 (199)
T TIGR03724       129 YLIDFGLGKY  138 (199)
T ss_pred             EEEECCCCcC
Confidence             578887765

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>smart00090 RIO RIO-like kinase

Probab=99.66  E-value=6.7e-16  Score=126.22  Aligned_cols=125  Identities=13%  Similarity=0.055  Sum_probs=91.4

Q ss_pred             eeeeecCceEEEEEE-EcccccCCceEEEEEEEecCCCCh-----------------------HHHHHHHHHHHHHHHhc
Q psy12228         72 YVKIKCAFGKVICAE-ANGILKQGIITTVAVKMLKEGHSD-----------------------AEMMDLVSEMEMMKMIG  127 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~-~~~~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~  127 (258)
                      ..||+|+||.||+|. ..     .++..||+|+++.....                       .....+.+|+.++..+ 
T Consensus        34 ~~Lg~G~~g~Vy~a~~~~-----~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L-  107 (237)
T smart00090       34 GCISTGKEANVYHALDFD-----GSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL-  107 (237)
T ss_pred             CeeccCcceeEEEEEecC-----CCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            389999999999998 43     46799999999753210                       0113467899999999 


Q ss_pred             CCC--cccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy12228        128 QHI--NIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS  205 (258)
Q Consensus       128 ~h~--nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~  205 (258)
                      .+.  .+.+++++    ...++||||+++++|...+.....                 +.......++.|++.++.+||+
T Consensus       108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~-----------------~~~~~~~~i~~qi~~~l~~LH~  166 (237)
T smart00090      108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVE-----------------PEEEEEFELYDDILEEMRKLYK  166 (237)
T ss_pred             HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCC-----------------cchHHHHHHHHHHHHHHHHHHh
Confidence            553  23344432    235899999999888765433222                 5666778999999999999999


Q ss_pred             CC-ccccCcc------------ccCCCccee
Q psy12228        206 RK-VGNDAVR------------FIGFDLCIL  223 (258)
Q Consensus       206 ~~-iiH~DlK------------i~dfgl~~~  223 (258)
                      +| |+|||||            ++|||.+..
T Consensus       167 ~g~iiH~Dikp~NIli~~~~i~LiDFg~a~~  197 (237)
T smart00090      167 EGELVHGDLSEYNILVHDGKVVIIDVSQSVE  197 (237)
T ss_pred             cCCEEeCCCChhhEEEECCCEEEEEChhhhc
Confidence            99 9999997            456776653

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.64  E-value=3.1e-15  Score=136.33  Aligned_cols=122  Identities=13%  Similarity=0.111  Sum_probs=95.7

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEe-cCC-CC-----hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKML-KEG-HS-----DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD  142 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~-~~~-~~-----~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~  142 (258)
                      ...+||+|+||.||+|.+.+       ..+++|+. ... ..     ....+++.+|++++..+ +|++++....++.+.
T Consensus       337 ~~~~iG~G~~g~Vy~~~~~~-------~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~  408 (535)
T PRK09605        337 PDHLIGKGAEADIKKGEYLG-------RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVDP  408 (535)
T ss_pred             ccceeccCCcEEEEEEeecC-------ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEeC
Confidence            35689999999999998752       23333332 111 11     11235688999999999 999999888887777


Q ss_pred             CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------
Q psy12228        143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------  214 (258)
Q Consensus       143 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------  214 (258)
                      ...++||||+++++|.+++..                         ...++.+++.+|.|||+.+++|||||        
T Consensus       409 ~~~~lv~E~~~g~~L~~~l~~-------------------------~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~~  463 (535)
T PRK09605        409 EEKTIVMEYIGGKDLKDVLEG-------------------------NPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVRD  463 (535)
T ss_pred             CCCEEEEEecCCCcHHHHHHH-------------------------HHHHHHHHHHHHHHHHhCCCccCCCChHHEEEEC
Confidence            778999999999999988752                         35688999999999999999999996        


Q ss_pred             ----ccCCCcceee
Q psy12228        215 ----FIGFDLCILV  224 (258)
Q Consensus       215 ----i~dfgl~~~~  224 (258)
                          ++|||+++..
T Consensus       464 ~~~~liDFGla~~~  477 (535)
T PRK09605        464 DRLYLIDFGLGKYS  477 (535)
T ss_pred             CcEEEEeCcccccC
Confidence                6899999864

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.63  E-value=1.8e-16  Score=150.76  Aligned_cols=111  Identities=13%  Similarity=0.049  Sum_probs=84.9

Q ss_pred             CC-CcccceeeeE-------EcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy12228        128 QH-INIINLLGVC-------TQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANG  199 (258)
Q Consensus       128 ~h-~nIv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~g  199 (258)
                      .| +||..++++|       .....+++++|++. ++|.++|....                ..+++.+++.++.||+.|
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~----------------~~~~~~~~~~i~~qi~~a   92 (793)
T PLN00181         30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPD----------------RSVDAFECFHVFRQIVEI   92 (793)
T ss_pred             hHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhccc----------------ccccHHHHHHHHHHHHHH
Confidence            45 5777788877       22345778889885 59999997533                238999999999999999


Q ss_pred             HHHHhhCCccccCccc--------------------------------cCCCcceeeecc-------------------C
Q psy12228        200 MHYLQSRKVGNDAVRF--------------------------------IGFDLCILVFFH-------------------D  228 (258)
Q Consensus       200 l~yLH~~~iiH~DlKi--------------------------------~dfgl~~~~~~~-------------------~  228 (258)
                      |.|||++||+|||||+                                +|||+++.....                   .
T Consensus        93 l~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (793)
T PLN00181         93 VNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQ  172 (793)
T ss_pred             HHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccc
Confidence            9999999999999972                                356666532100                   0


Q ss_pred             CccccccccccccccccCCCCccccee
Q psy12228        229 STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       229 ~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ....||+.|||||++.+..|+.++||.
T Consensus       173 ~~~~gt~~Y~APE~~~~~~~~~~sDVw  199 (793)
T PLN00181        173 ILAMEMSWYTSPEEDNGSSSNCASDVY  199 (793)
T ss_pred             cccCCCcceEChhhhccCCCCchhhhh
Confidence            124678899999999999999999984

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.62  E-value=4.1e-15  Score=119.81  Aligned_cols=114  Identities=9%  Similarity=0.045  Sum_probs=87.8

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH--HHHH------HHHHHHHHHHhcCCCcccceeeeEEc
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA--EMMD------LVSEMEMMKMIGQHINIINLLGVCTQ  141 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~------~~~E~~~l~~l~~h~nIv~l~~~~~~  141 (258)
                      -..++|+|+||.||+....       +..+|+|++++.....  ....      +.+|+..+.++ .|++|..+..++..
T Consensus        35 ~~~~l~~~~f~~v~l~~~~-------~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~~  106 (232)
T PRK10359         35 TIKVFRNIDDTKVSLIDTD-------YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYLL  106 (232)
T ss_pred             EEEEecCCCceEEEEEecC-------CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeeee
Confidence            3447999999999986442       4579999997654322  2233      57899999999 99999999888664


Q ss_pred             C--------CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc
Q psy12228        142 D--------GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV  213 (258)
Q Consensus       142 ~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl  213 (258)
                      .        +..+|+|||++|.+|.++..                     +++.    ...+++.+|..||+.|++|||+
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------------------~~~~----~~~~i~~~l~~lH~~gi~H~Di  161 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPE---------------------ISED----VKAKIKASIESLHQHGMVSGDP  161 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhh---------------------ccHH----HHHHHHHHHHHHHHcCCccCCC
Confidence            3        35889999999999987631                     3332    3559999999999999999999


Q ss_pred             ccc
Q psy12228        214 RFI  216 (258)
Q Consensus       214 Ki~  216 (258)
                      |++
T Consensus       162 kp~  164 (232)
T PRK10359        162 HKG  164 (232)
T ss_pred             ChH
Confidence            844

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.61  E-value=6.7e-15  Score=116.41  Aligned_cols=118  Identities=9%  Similarity=0.033  Sum_probs=89.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC---hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS---DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..|++|+||+||.+..       .+.+++.+.+....-   .-....+.+|+++|++|.+|++|++++++    +..+++
T Consensus         8 ~~l~~~~f~~v~~~~~-------~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lv   76 (218)
T PRK12274          8 EPLKSDTFGRILLVRG-------GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLD   76 (218)
T ss_pred             eeecCCCcceEEEeec-------CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEE
Confidence            3789999999996654       347888777765321   11123578999999999666889999886    346999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc-c-------------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV-R-------------  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl-K-------------  214 (258)
                      |||+.|.+|.+.+..                       . ...++.|++.+|.++|++||+|||| |             
T Consensus        77 meyI~G~~L~~~~~~-----------------------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~  132 (218)
T PRK12274         77 RSYLAGAAMYQRPPR-----------------------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPA  132 (218)
T ss_pred             EeeecCccHHhhhhh-----------------------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEE
Confidence            999999888643211                       1 1357789999999999999999999 5             


Q ss_pred             ccCCCcceee
Q psy12228        215 FIGFDLCILV  224 (258)
Q Consensus       215 i~dfgl~~~~  224 (258)
                      ++|||++...
T Consensus       133 LIDFG~A~~~  142 (218)
T PRK12274        133 VIDFQLAVRG  142 (218)
T ss_pred             EEECCCceec
Confidence            7899999853

>KOG0590|consensus

Probab=99.60  E-value=5.6e-16  Score=141.58  Aligned_cols=166  Identities=20%  Similarity=0.267  Sum_probs=123.3

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHH-HHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEM-MDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ..+.++|.|++|.|+...............+++| .......... ..+..|+.+-..+ .|+|++..+..+.+.....-
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~l~~~~~~~~~~~  398 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTESERKYNYNITSEFCIGSSL-SHPNIIETLDIVQEIDGILQ  398 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcccHHHHhhhhhhheeecccc-cCCchhhhHHHHhhcccchh
Confidence            4566899999997777776521111111223333 1122122222 2367788888889 99999988888776655555


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      .||||++ +|..++.....                 ++..++..++.|++.|++|||+.||.|||+|             
T Consensus       399 ~mE~~~~-Dlf~~~~~~~~-----------------~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lk  460 (601)
T KOG0590|consen  399 SMEYCPY-DLFSLVMSNGK-----------------LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILK  460 (601)
T ss_pred             hhhcccH-HHHHHHhcccc-----------------cchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceE
Confidence            5999999 99999987644                 8999999999999999999999999999995             


Q ss_pred             ccCCCcceeeeccC-------CccccccccccccccccCCCCcc-cce
Q psy12228        215 FIGFDLCILVFFHD-------STLLKTTSTIASLILRNQKVSVL-LDL  254 (258)
Q Consensus       215 i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~s~~-~Dv  254 (258)
                      ++|||.+.......       ...+|+..|+|||++.+..|++. +||
T Consensus       461 i~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDi  508 (601)
T KOG0590|consen  461 IIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDV  508 (601)
T ss_pred             EeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhh
Confidence            78999987654432       46889999999999999999754 554

>KOG0195|consensus

Probab=99.57  E-value=5.7e-16  Score=124.60  Aligned_cols=154  Identities=19%  Similarity=0.329  Sum_probs=117.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCC-CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      +|.+...|+.|+|++.+       ..+++|+++.. .+.....+|..|.-.|+.+ .||||+.++|.|..+..+.++..|
T Consensus       197 kl~e~hsgelwrgrwqg-------ndivakil~vr~~t~risrdfneefp~lrif-shpnilpvlgacnsppnlv~isq~  268 (448)
T KOG0195|consen  197 KLAESHSGELWRGRWQG-------NDIVAKILNVREVTARISRDFNEEFPALRIF-SHPNILPVLGACNSPPNLVIISQY  268 (448)
T ss_pred             hhccCCCcccccccccC-------cchhhhhhhhhhcchhhcchhhhhCcceeee-cCCchhhhhhhccCCCCceEeeee
Confidence            67889999999999984       45777887532 2444446789999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-Ccccc---Ccc--ccCCCcceeee
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGND---AVR--FIGFDLCILVF  225 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~---DlK--i~dfgl~~~~~  225 (258)
                      |+.|+|+..|+....               ..++..++..++.++++||+|||+. .++-|   +-|  .+|=++.....
T Consensus       269 mp~gslynvlhe~t~---------------vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris  333 (448)
T KOG0195|consen  269 MPFGSLYNVLHEQTS---------------VVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS  333 (448)
T ss_pred             ccchHHHHHHhcCcc---------------EEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee
Confidence            999999999998654               4578899999999999999999996 33332   222  23333322222


Q ss_pred             c-------cCCccccccccccccccccCCCC
Q psy12228        226 F-------HDSTLLKTTSTIASLILRNQKVS  249 (258)
Q Consensus       226 ~-------~~~~~~gt~~y~aPE~~~~~~~s  249 (258)
                      .       .......+|.||+||.++.++-+
T Consensus       334 mad~kfsfqe~gr~y~pawmspealqrkped  364 (448)
T KOG0195|consen  334 MADTKFSFQEVGRAYSPAWMSPEALQRKPED  364 (448)
T ss_pred             cccceeeeeccccccCcccCCHHHHhcCchh
Confidence            2       22345667999999999876553

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.53  E-value=5.8e-14  Score=111.85  Aligned_cols=119  Identities=11%  Similarity=0.014  Sum_probs=87.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh---------------------HHHHHHHHHHHHHHHhcCCC
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD---------------------AEMMDLVSEMEMMKMIGQHI  130 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~E~~~l~~l~~h~  130 (258)
                      ..||+|+||.||++...      +++.||||+++.....                     .....+..|+.++..+ .|+
T Consensus        21 ~~i~~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~   93 (198)
T cd05144          21 NQIGVGKESDVYLALDP------DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEE   93 (198)
T ss_pred             CccccCcceEEEEEEcC------CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHc
Confidence            47999999999999864      5789999987643210                     0112367889999998 777


Q ss_pred             c--ccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        131 N--IINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       131 n--Iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      +  ++..++    ....+++|||+++++|......                       .....++.+++.++.++|+.||
T Consensus        94 ~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------------------~~~~~~~~~i~~~l~~lh~~gi  146 (198)
T cd05144          94 GFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-----------------------EDPEEVLDEILEEIVKAYKHGI  146 (198)
T ss_pred             CCCCCceee----cCCceEEEEEeCCcchhhcccc-----------------------ccHHHHHHHHHHHHHHHHHCCC
Confidence            4  444443    2356899999999988654220                       2345788999999999999999


Q ss_pred             cccCcc-------------ccCCCcceee
Q psy12228        209 GNDAVR-------------FIGFDLCILV  224 (258)
Q Consensus       209 iH~DlK-------------i~dfgl~~~~  224 (258)
                      +|||||             ++|||++...
T Consensus       147 ~H~Dl~p~Nill~~~~~~~liDfg~~~~~  175 (198)
T cd05144         147 IHGDLSEFNILVDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             CcCCCCcccEEEcCCCcEEEEECCccccC
Confidence            999996             6788887643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0603|consensus

Probab=99.47  E-value=3.2e-15  Score=132.23  Aligned_cols=160  Identities=19%  Similarity=0.176  Sum_probs=128.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ++|+|+||+|+++.--  .....+..+|+|++++.. ..........|..++..+++||.+|++...+..+...++++++
T Consensus         1 vlg~g~~gkvfLvrk~--~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~   78 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKA--GGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDF   78 (612)
T ss_pred             CCCcCCCcchHHHHHh--ccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhh
Confidence            3689999999987532  122456789999986542 1112225566778888885699999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      ..+|+|...+.....                 +++.....+...++.+++++|+.+|++||+|             +.||
T Consensus        79 ~rgg~lft~l~~~~~-----------------f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdf  141 (612)
T KOG0603|consen   79 LRGGDLFTRLSKEVM-----------------FDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDF  141 (612)
T ss_pred             cccchhhhccccCCc-----------------hHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCc
Confidence            999999998887765                 8888899999999999999999999999995             5688


Q ss_pred             CcceeeeccCCccccccccccccccccCCCCcccce
Q psy12228        219 DLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      |+++........ +||..|||||++.  .+..++|+
T Consensus       142 glske~v~~~~~-cgt~eymApEI~~--gh~~a~D~  174 (612)
T KOG0603|consen  142 GLSKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADW  174 (612)
T ss_pred             hhhhHhHhhhhc-ccchhhhhhHhhh--ccCCcccc
Confidence            988864444333 9999999999998  56677775

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.47  E-value=9.1e-13  Score=107.92  Aligned_cols=123  Identities=13%  Similarity=0.146  Sum_probs=90.1

Q ss_pred             eeeee-ecCceEEEEEEEcccccCCceEEEEEEEecCCC------------ChHHHHHHHHHHHHHHHhcCCCcc--cce
Q psy12228         71 EYVKI-KCAFGKVICAEANGILKQGIITTVAVKMLKEGH------------SDAEMMDLVSEMEMMKMIGQHINI--INL  135 (258)
Q Consensus        71 ~~~ig-~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~~h~nI--v~l  135 (258)
                      ...|| .|+.|.||.+...       +..++||.++...            +......+.+|+.++..+ .|++|  +..
T Consensus        36 ~~~lg~~~g~gtv~~v~~~-------~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~p  107 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP-------GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRP  107 (239)
T ss_pred             CceeecCCCCccEEEEEeC-------CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCcee
Confidence            34788 8999999998764       3678888875321            112335688999999999 88775  667


Q ss_pred             eeeEEcCC----cEEEEEEeCCC-CCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccc
Q psy12228        136 LGVCTQDG----PLYVIVEFAPH-GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGN  210 (258)
Q Consensus       136 ~~~~~~~~----~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH  210 (258)
                      +++.....    ..++|||++++ .+|.+++... .                 ++...    +.+|+.+|.+||++||+|
T Consensus       108 l~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-~-----------------l~~~~----~~~i~~~l~~lH~~GI~H  165 (239)
T PRK01723        108 IAARVVRHGLFYRADILIERIEGARDLVALLQEA-P-----------------LSEEQ----WQAIGQLIARFHDAGVYH  165 (239)
T ss_pred             EeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC-C-----------------CCHHH----HHHHHHHHHHHHHCCCCC
Confidence            76654322    23599999997 6999887642 1                 45443    568999999999999999


Q ss_pred             cCcc-------------ccCCCccee
Q psy12228        211 DAVR-------------FIGFDLCIL  223 (258)
Q Consensus       211 ~DlK-------------i~dfgl~~~  223 (258)
                      ||||             ++|||.+..
T Consensus       166 rDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        166 ADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             CCCCchhEEEcCCCCEEEEECCCccc
Confidence            9997             567776664

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.47  E-value=2.9e-13  Score=106.66  Aligned_cols=122  Identities=16%  Similarity=0.102  Sum_probs=81.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-HHHHH----------------------HHHHHHHHHHhcC
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-AEMMD----------------------LVSEMEMMKMIGQ  128 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~----------------------~~~E~~~l~~l~~  128 (258)
                      ..||+|+||.||+|...      ++..||||+++..... .....                      ...|...+..+ .
T Consensus         3 ~~lg~G~~g~Vy~a~~~------~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~   75 (187)
T cd05119           3 GPIGTGKEADVYLALDG------DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRL-Y   75 (187)
T ss_pred             cccccccceeEEEEECC------CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHH-H
Confidence            37899999999999864      5688999998753211 11111                      13566666666 3


Q ss_pred             CCc--ccceeeeEEcCCcEEEEEEeCCCCCHHHH-HhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy12228        129 HIN--IINLLGVCTQDGPLYVIVEFAPHGNLRDF-LRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS  205 (258)
Q Consensus       129 h~n--Iv~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~  205 (258)
                      +..  +.+.+++    ...+++|||++++++... +....                  .. .....++.+++.++.++|+
T Consensus        76 ~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~------------------~~-~~~~~~~~~~~~~l~~lh~  132 (187)
T cd05119          76 EAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR------------------LL-EDPEELYDQILELMRKLYR  132 (187)
T ss_pred             HcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhh------------------hc-ccHHHHHHHHHHHHHHHhh
Confidence            332  3444443    245899999998654321 21111                  11 5678899999999999999


Q ss_pred             -CCccccCcc------------ccCCCccee
Q psy12228        206 -RKVGNDAVR------------FIGFDLCIL  223 (258)
Q Consensus       206 -~~iiH~DlK------------i~dfgl~~~  223 (258)
                       .+|+|+|||            ++|||.+..
T Consensus       133 ~~~ivH~Dl~p~Nili~~~~~~liDfg~a~~  163 (187)
T cd05119         133 EAGLVHGDLSEYNILVDDGKVYIIDVPQAVE  163 (187)
T ss_pred             ccCcCcCCCChhhEEEECCcEEEEECccccc
Confidence             999999996            566776653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.43  E-value=7e-13  Score=99.99  Aligned_cols=110  Identities=14%  Similarity=0.174  Sum_probs=88.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC-CcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH-INIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|.++.||++...+       ..+++|.......   ...+.+|+..+..+.++ .++++++++....+..+++||
T Consensus         4 ~~i~~g~~~~v~~~~~~~-------~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e   73 (155)
T cd05120           4 KLLKGGLTNRVYLLGTKD-------EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLME   73 (155)
T ss_pred             eecccccccceEEEEecC-------CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEE
Confidence            378999999999999752       6799999876433   45688999999999333 688999988887788999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC---CccccCccc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR---KVGNDAVRF  215 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~iiH~DlKi  215 (258)
                      |++++.+..+                        +......++.+++.+|.+||..   +++|+|+|+
T Consensus        74 ~~~g~~~~~~------------------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~  117 (155)
T cd05120          74 WIEGETLDEV------------------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHP  117 (155)
T ss_pred             ecCCeecccC------------------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCc
Confidence            9998666432                        3355677889999999999985   799999973

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1240|consensus

Probab=99.26  E-value=1e-12  Score=122.72  Aligned_cols=147  Identities=18%  Similarity=0.184  Sum_probs=109.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh---HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD---AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..||++.|=+|.+|+.+      .|. |+||++-+....   ....+-++|++ .... ++||++.+.-+-..+.-.|||
T Consensus        29 ~~LGstRFlKv~r~k~~------eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~-~~pn~lPfqk~~~t~kAAylv   99 (1431)
T KOG1240|consen   29 ENLGSTRFLKVARAKDR------EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALM-KAPNCLPFQKVLVTDKAAYLV   99 (1431)
T ss_pred             cccCchhhhhhhhccCC------Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhh-cCCcccchHHHHHhhHHHHHH
Confidence            37899999999999876      444 999999554322   22334445555 4444 999999988887777778899


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      -+|..+ +|++.|..+.-                 +..-+...|+.|++.||.-+|..||+|+|||             +
T Consensus       100 Rqyvkh-nLyDRlSTRPF-----------------L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~L  161 (1431)
T KOG1240|consen  100 RQYVKH-NLYDRLSTRPF-----------------LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYL  161 (1431)
T ss_pred             HHHHhh-hhhhhhccchH-----------------HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhh
Confidence            999987 99999987654                 8888999999999999999999999999999             5


Q ss_pred             cCCCcceeeeccC------C----cccccccccccccccc
Q psy12228        216 IGFDLCILVFFHD------S----TLLKTTSTIASLILRN  245 (258)
Q Consensus       216 ~dfgl~~~~~~~~------~----~~~gt~~y~aPE~~~~  245 (258)
                      +||.--+....+.      .    +......|+|||.+..
T Consensus       162 tDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~  201 (1431)
T KOG1240|consen  162 TDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVS  201 (1431)
T ss_pred             hcccccCCccCCCCCcccceEEEecCCceeeecChHhhhc
Confidence            6775333221111      1    2233367999999755

>KOG4158|consensus

Probab=99.26  E-value=9.6e-12  Score=105.26  Aligned_cols=100  Identities=17%  Similarity=0.251  Sum_probs=81.2

Q ss_pred             cCCCcccceeeeEEc---------------------------CCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCC
Q psy12228        127 GQHINIINLLGVCTQ---------------------------DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYT  179 (258)
Q Consensus       127 ~~h~nIv~l~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~  179 (258)
                      .+|||||++.++|.+                           +..+|+||.-++. +|.+||..+.              
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--------------  337 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--------------  337 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--------------
Confidence            479999999998844                           1247899999987 9999998754              


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------------ccCCCcceeeecc---------CCcccc
Q psy12228        180 NGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------------FIGFDLCILVFFH---------DSTLLK  233 (258)
Q Consensus       180 ~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------------i~dfgl~~~~~~~---------~~~~~g  233 (258)
                          .+.....-+..|+++|+.|||.+||.|||+|                 ++|||.|-.....         +-...|
T Consensus       338 ----~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GG  413 (598)
T KOG4158|consen  338 ----RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGG  413 (598)
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCC
Confidence                5667778889999999999999999999998                 7899988654432         235567


Q ss_pred             cccccccccccc
Q psy12228        234 TTSTIASLILRN  245 (258)
Q Consensus       234 t~~y~aPE~~~~  245 (258)
                      ...-||||+...
T Consensus       414 Na~lmAPEi~ta  425 (598)
T KOG4158|consen  414 NAKLMAPEIATA  425 (598)
T ss_pred             cceecchhhhhc
Confidence            788999999865

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.24  E-value=1.6e-11  Score=95.58  Aligned_cols=81  Identities=12%  Similarity=0.126  Sum_probs=64.4

Q ss_pred             CCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCcccc-----C--ccccCCCcceeeecc
Q psy12228        155 GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGND-----A--VRFIGFDLCILVFFH  227 (258)
Q Consensus       155 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~-----D--lKi~dfgl~~~~~~~  227 (258)
                      |+|.+++...+.                .+++.+++.|+.||+.||.|||+++-.+.     |  +|+  ||+++.....
T Consensus         1 GsL~~~l~~~~~----------------~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~   62 (176)
T smart00750        1 VSLADILEVRGR----------------PLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKL--DGSVAFKTPE   62 (176)
T ss_pred             CcHHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceee--ccceEeeccc
Confidence            689999986432                39999999999999999999999752222     1  245  9998764432


Q ss_pred             CCccccccccccccccccCCCCccccee
Q psy12228        228 DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       228 ~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        ...||+.|||||++.+..++.++||.
T Consensus        63 --~~~g~~~y~aPE~~~~~~~~~~~Diw   88 (176)
T smart00750       63 --QSRVDPYFMAPEVIQGQSYTEKADIY   88 (176)
T ss_pred             --cCCCcccccChHHhcCCCCcchhhHH
Confidence              33789999999999999999999984

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.23  E-value=5e-11  Score=105.84  Aligned_cols=130  Identities=16%  Similarity=0.082  Sum_probs=86.2

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHH-------------------------------------
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEM-------------------------------------  113 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------  113 (258)
                      +..||.|++|.||+|..+      +|+.||||+.++.......                                     
T Consensus       122 ~~plasaSigQVh~A~l~------~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  195 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLV------DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLR  195 (437)
T ss_pred             CcceeeeehhheEEEEec------CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHH
Confidence            347999999999999986      6789999999765311100                                     


Q ss_pred             --HHHHHHHHHHHHhc---CCCcccceeeeEE-cCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHH
Q psy12228        114 --MDLVSEMEMMKMIG---QHINIINLLGVCT-QDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEK  187 (258)
Q Consensus       114 --~~~~~E~~~l~~l~---~h~nIv~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  187 (258)
                        -+|.+|+..+.+++   +|.+-+.+...+. .....+|||||++|++|.++......                ..+  
T Consensus       196 ~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~----------------~~~--  257 (437)
T TIGR01982       196 RELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA----------------GLD--  257 (437)
T ss_pred             HHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc----------------CCC--
Confidence              12555666666652   1222233333332 13356899999999999887754321                022  


Q ss_pred             HHHHHHHHHHH-HHHHHhhCCccccCcc-------------ccCCCcceeee
Q psy12228        188 DLISFAYQVAN-GMHYLQSRKVGNDAVR-------------FIGFDLCILVF  225 (258)
Q Consensus       188 ~~~~i~~qi~~-gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~  225 (258)
                       ...++..++. .+..+|..|++|+|+|             ++|||++....
T Consensus       258 -~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       258 -RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             -HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence             3445666655 4788999999999996             67999887654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.11  E-value=1.6e-09  Score=85.52  Aligned_cols=131  Identities=17%  Similarity=0.149  Sum_probs=88.4

Q ss_pred             eeeeecCceEEEEEEEccc-ccCCceEEEEEEEecCCC------------C---------hHHHHHHH----HHHHHHHH
Q psy12228         72 YVKIKCAFGKVICAEANGI-LKQGIITTVAVKMLKEGH------------S---------DAEMMDLV----SEMEMMKM  125 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~-~~~~~~~~vavK~~~~~~------------~---------~~~~~~~~----~E~~~l~~  125 (258)
                      ..||.|.-+.||.|...+. .....+..+|||+.+...            .         ...+..+.    +|+..|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            3789999999999975310 000134789999985421            0         01122333    89999999


Q ss_pred             hcCC-CcccceeeeEEcCCcEEEEEEeCCCCCHHH-HHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy12228        126 IGQH-INIINLLGVCTQDGPLYVIVEFAPHGNLRD-FLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYL  203 (258)
Q Consensus       126 l~~h-~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yL  203 (258)
                      +... -++...+++    ..-+|||||+.++.+.. .|+.. .                 ++..+...+..+++.+|..|
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~-~-----------------~~~~~~~~i~~~i~~~l~~l  140 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA-K-----------------LNDEEMKNAYYQVLSMMKQL  140 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc-c-----------------cCHHHHHHHHHHHHHHHHHH
Confidence            8433 456666654    34589999998754422 22221 1                 55667778889999999999


Q ss_pred             -hhCCccccCcc------------ccCCCcceee
Q psy12228        204 -QSRKVGNDAVR------------FIGFDLCILV  224 (258)
Q Consensus       204 -H~~~iiH~DlK------------i~dfgl~~~~  224 (258)
                       |..|+||+||+            ++|||.+...
T Consensus       141 ~H~~glVHGDLs~~NIL~~~~~v~iIDF~qav~~  174 (197)
T cd05146         141 YKECNLVHADLSEYNMLWHDGKVWFIDVSQSVEP  174 (197)
T ss_pred             HHhCCeecCCCCHHHEEEECCcEEEEECCCceeC
Confidence             89999999995            7888887754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1023|consensus

Probab=99.10  E-value=1.2e-10  Score=102.94  Aligned_cols=115  Identities=22%  Similarity=0.323  Sum_probs=93.2

Q ss_pred             HHhcCCCcccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy12228        124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYL  203 (258)
Q Consensus       124 ~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yL  203 (258)
                      +.+ .|.|+.+++|.+.+++..++|.+||..|+|.+.+.....                .+++.-...++++|+.||.||
T Consensus         2 ~~l-~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~----------------~~d~~F~~s~~rdi~~Gl~yl   64 (484)
T KOG1023|consen    2 RQL-DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI----------------KLDYFFILSFIRDISKGLAYL   64 (484)
T ss_pred             ccc-chhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc----------------CccHHHHHHHHHHHHHHHHHH
Confidence            456 899999999999999999999999999999999988442                388888999999999999999


Q ss_pred             hhCCc-cccCc-------------cccCCCcceeeec-----cCCccccccccccccccccCC-------CCccccee
Q psy12228        204 QSRKV-GNDAV-------------RFIGFDLCILVFF-----HDSTLLKTTSTIASLILRNQK-------VSVLLDLI  255 (258)
Q Consensus       204 H~~~i-iH~Dl-------------Ki~dfgl~~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~s~~~Dv~  255 (258)
                      |+..| .|+.+             |++|||+......     .........-|.|||.+.+..       .+.+.||+
T Consensus        65 h~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiY  142 (484)
T KOG1023|consen   65 HNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIY  142 (484)
T ss_pred             hcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCee
Confidence            99877 89887             5899999876532     112233446799999998742       34557775

>KOG1033|consensus

Probab=99.05  E-value=4.1e-11  Score=104.56  Aligned_cols=95  Identities=19%  Similarity=0.284  Sum_probs=80.8

Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      .++|.|++|.-.+|.++|.+.+.              ....++.....++.|++.|++|   ++.+|+|+|         
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~--------------~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d  392 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRT--------------GEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDD  392 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCc--------------ccccchhHHHHHHHhhccchhh---ccchhhhccccccccccc
Confidence            47899999999999999986553              2346788899999999999999   999999995         


Q ss_pred             ----ccCCCcceeeeccC---------CccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD---------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~---------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          |.|||+........         ...+||..||+||++.++.|+.++||+
T Consensus       393 ~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIy  446 (516)
T KOG1033|consen  393 DQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIY  446 (516)
T ss_pred             hhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchh
Confidence                77999887544332         467899999999999999999999985

>KOG0606|consensus

Probab=99.04  E-value=9.6e-11  Score=109.50  Aligned_cols=121  Identities=17%  Similarity=0.249  Sum_probs=85.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +|..|+||.||.++++     .+.+.+|+| ++++   .   -+++.  ++... .+|.+|                   
T Consensus        90 lisngAygavylvrh~-----~trqrfa~k-iNkq---~---lilRn--ilt~a-~npfvv-------------------  135 (1205)
T KOG0606|consen   90 LISNGAYGAVYLVRHK-----ETRQRFAMK-INKQ---N---LILRN--ILTFA-GNPFVV-------------------  135 (1205)
T ss_pred             eeccCCCCceeeeecc-----ccccchhhc-cccc---c---hhhhc--ccccc-CCccee-------------------
Confidence            6789999999999987     566889984 4322   1   11111  23333 444444                   


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                        ||-...++.-+.                 ++...        +.+++|||+.+|+|||+|             +.|||
T Consensus       136 --gDc~tllk~~g~-----------------lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfg  188 (1205)
T KOG0606|consen  136 --GDCATLLKNIGP-----------------LPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFG  188 (1205)
T ss_pred             --chhhhhcccCCC-----------------Ccchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchh
Confidence              566666665443                 33333        789999999999999995             78999


Q ss_pred             cceeeec------------------cCCccccccccccccccccCCCCcccce
Q psy12228        220 LCILVFF------------------HDSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       220 l~~~~~~------------------~~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      +++.-..                  .+..++||+.|+|||++..+.|+..+||
T Consensus       189 Lsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdw  241 (1205)
T KOG0606|consen  189 LSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDW  241 (1205)
T ss_pred             hhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccH
Confidence            8865211                  1246799999999999999999999996

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.00  E-value=2.2e-09  Score=89.27  Aligned_cols=154  Identities=14%  Similarity=0.075  Sum_probs=91.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCC--CChHHHHHHHHHHHHHHHhcC---------CCcccceeeeE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEMEMMKMIGQ---------HINIINLLGVC  139 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~---------h~nIv~l~~~~  139 (258)
                      ...||.|+++.||.+...     .++..+|||+....  ......+++.+|.-....+..         |-.++--++..
T Consensus        17 ~~~i~~g~~~~v~~v~d~-----~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~   91 (288)
T PF14531_consen   17 GRIIGKGGFSIVFEVTDV-----ETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL   91 (288)
T ss_dssp             EEEEEEETTEEEEEEEET-----TTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred             ccccccCCceEEEEEEEc-----cCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence            348999999999999998     68899999998432  233456777777655444311         21222222222


Q ss_pred             E---------cC---C-----cEEEEEEeCCCCCHHHHHhh---cCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy12228        140 T---------QD---G-----PLYVIVEFAPHGNLRDFLRK---HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANG  199 (258)
Q Consensus       140 ~---------~~---~-----~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~g  199 (258)
                      .         ..   .     +.+++|+-+.+ ||.+++.-   ...             ....+.......+..|+++.
T Consensus        92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~-------------~~~~l~~~arl~lT~Q~I~l  157 (288)
T PF14531_consen   92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQ-------------THSPLAFAARLSLTVQMIRL  157 (288)
T ss_dssp             EETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTT-------------TSHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhccc-------------ccchhHHHHHHHHHHHHHHH
Confidence            1         11   1     24678888864 99888653   221             00112333446667999999


Q ss_pred             HHHHhhCCccccCccccCC-------------CcceeeeccCCc--ccccccccccccccc
Q psy12228        200 MHYLQSRKVGNDAVRFIGF-------------DLCILVFFHDST--LLKTTSTIASLILRN  245 (258)
Q Consensus       200 l~yLH~~~iiH~DlKi~df-------------gl~~~~~~~~~~--~~gt~~y~aPE~~~~  245 (258)
                      +++||+.|++|+|||+.+|             +...  ..+...  ...+..|.+||....
T Consensus       158 vA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~--r~g~~~~~~~~~~~~~PPe~~~~  216 (288)
T PF14531_consen  158 VANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLV--RAGTRYRCSEFPVAFTPPELESC  216 (288)
T ss_dssp             HHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEE--ETTEEEEGGGS-TTTS-HHHHHH
T ss_pred             HHHHhhcceEecccceeeEEEcCCCCEEEcChHHHe--ecCceeeccCCCcccCChhhhhh
Confidence            9999999999999985544             3333  222211  234467999997643

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.99  E-value=1e-09  Score=99.14  Aligned_cols=129  Identities=16%  Similarity=0.090  Sum_probs=78.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh---------------------------------HHHH----
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD---------------------------------AEMM----  114 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------------------~~~~----  114 (258)
                      ..||+|++|.||+|..+     .+|+.||||++++....                                 +..+    
T Consensus       125 ~PlasaSiaQVh~A~l~-----~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        125 KPLASASIAQVHFARLK-----DNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hhhcCCCccEEEEEEEC-----CCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            47999999999999997     45899999999864211                                 0011    


Q ss_pred             --HHHHHHHHHHHhc---CCCcccceeeeEEc-CCcEEEEEEeCCCCCHHHH--HhhcCCCCCCCCCCCCCCCCCCCCCH
Q psy12228        115 --DLVSEMEMMKMIG---QHINIINLLGVCTQ-DGPLYVIVEFAPHGNLRDF--LRKHRPSSGYESPLGSAYTNGNVLTE  186 (258)
Q Consensus       115 --~~~~E~~~l~~l~---~h~nIv~l~~~~~~-~~~~~lv~e~~~~g~L~~~--l~~~~~~~~~~~~~~~~~~~~~~l~~  186 (258)
                        ++.+|+..+.++.   .+.+.+.+..++.+ ....+|||||+.|+++.++  +...+.             ..+.+..
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~-------------d~~~la~  266 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGT-------------DMKLLAE  266 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCC-------------CHHHHHH
Confidence              2445555555542   13333433333332 3356799999999999875  332221             0011333


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCccccCcc-----------------ccCCCcceeee
Q psy12228        187 KDLISFAYQVANGMHYLQSRKVGNDAVR-----------------FIGFDLCILVF  225 (258)
Q Consensus       187 ~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------------i~dfgl~~~~~  225 (258)
                      ..+..++.|+       ...|++|+|+|                 ++|||+.....
T Consensus       267 ~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        267 RGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             HHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            3444444444       45899999986                 56888877543

>KOG3087|consensus

Probab=98.98  E-value=1.1e-08  Score=78.79  Aligned_cols=129  Identities=12%  Similarity=0.121  Sum_probs=95.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC------C-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH------S-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~------~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~  145 (258)
                      +|-+|+-+.|+++.+.+       +...||.-....      + .-.+.+..+|+..+.++ .--.|.--.-++.+.+.-
T Consensus        14 likQGAEArv~~~~~~G-------e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~-~~~GI~~P~l~~~D~~~~   85 (229)
T KOG3087|consen   14 LIKQGAEARVPRGSFSG-------EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKC-RALGIPAPRLIFIDTYGG   85 (229)
T ss_pred             eeeccceeeEeeeccCC-------ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHH-HHhCCCCceEEEEecCCC
Confidence            67799999999999863       666777653221      1 11246788999999998 555555544556666677


Q ss_pred             EEEEEeCCC-CCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        146 YVIVEFAPH-GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       146 ~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .|+|||+++ .++.+++......               .........++.+|-..+.-||..+|||+||.          
T Consensus        86 ~i~ME~~~g~~~vk~~i~~~~~~---------------~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~  150 (229)
T KOG3087|consen   86 QIYMEFIDGASTVKDFILSTMED---------------ESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDG  150 (229)
T ss_pred             eEEEEeccchhHHHHHHHHHccC---------------cccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCC
Confidence            899999986 4899999887641               13333447899999999999999999999994          


Q ss_pred             ------ccCCCcceee
Q psy12228        215 ------FIGFDLCILV  224 (258)
Q Consensus       215 ------i~dfgl~~~~  224 (258)
                            ++|||++...
T Consensus       151 ~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  151 NQITPILIDFGLSSVS  166 (229)
T ss_pred             CcCceEEEeecchhcc
Confidence                  6799988653

>KOG0590|consensus

Probab=98.97  E-value=8.1e-11  Score=107.96  Aligned_cols=163  Identities=13%  Similarity=0.158  Sum_probs=125.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+|+.|-.....+    .....+|+|.+.... ......+...|..+-+.+.+|+|++.+++.....+..++.++|
T Consensus        27 ~ig~gs~~~~~~~~~~~----~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~  102 (601)
T KOG0590|consen   27 SIGKGSFSSSALASNSR----DPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSY  102 (601)
T ss_pred             cccccccchhhhhhhcC----CCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCc
Confidence            48999999988777642    344677888776542 2333344556777777774599999999999999999999999


Q ss_pred             CCCCCHHHHH-hhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-hCCccccCcc--------------c
Q psy12228        152 APHGNLRDFL-RKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQ-SRKVGNDAVR--------------F  215 (258)
Q Consensus       152 ~~~g~L~~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH-~~~iiH~DlK--------------i  215 (258)
                      ..+|++...+ ....                ...+....-.+..|+..++.|+| ..++.|||+|              +
T Consensus       103 s~g~~~f~~i~~~~~----------------~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~  166 (601)
T KOG0590|consen  103 SDGGSLFSKISHPDS----------------TGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKI  166 (601)
T ss_pred             ccccccccccccCCc----------------cCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccC
Confidence            9999999887 3332                13677788889999999999999 9999999985              6


Q ss_pred             cCCCcceeeec-cC-----Ccccc-ccccccccccccCCC-Cccccee
Q psy12228        216 IGFDLCILVFF-HD-----STLLK-TTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~-~~-----~~~~g-t~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                      +|||+|..... ..     ...+| ++.|+|||...+..| .+..|+-
T Consensus       167 ~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~  214 (601)
T KOG0590|consen  167 ADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVW  214 (601)
T ss_pred             CCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccc
Confidence            79999986655 21     35677 999999999988555 5555553

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.94  E-value=3.4e-09  Score=81.87  Aligned_cols=105  Identities=15%  Similarity=0.058  Sum_probs=74.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcc-cceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINI-INLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nI-v~l~~~~~~~~~~~lv~e~  151 (258)
                      .|+.|.++.||++...       +..+++|+......  ....+.+|+.++..+ .+.++ .+++....  ...++||||
T Consensus         5 ~l~~G~~~~vy~~~~~-------~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l-~~~~~~P~~~~~~~--~~~~lv~e~   72 (170)
T cd05151           5 PLKGGMTNKNYRVEVA-------NKKYVVRIPGNGTE--LLINRENEAENSKLA-AEAGIGPKLYYFDP--ETGVLITEF   72 (170)
T ss_pred             ecCCcccCceEEEEEC-------CeEEEEEeCCCCcc--cccCHHHHHHHHHHH-HHhCCCCceEEEeC--CCCeEEEEe
Confidence            5778999999998864       47899999865422  123467899999998 44443 45555443  335799999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc-----cccCcc
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV-----GNDAVR  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i-----iH~DlK  214 (258)
                      +++.++...     .                 ..   ...++.+++.+|..||+.++     +|+|++
T Consensus        73 i~G~~l~~~-----~-----------------~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~  115 (170)
T cd05151          73 IEGSELLTE-----D-----------------FS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDLL  115 (170)
T ss_pred             cCCCccccc-----c-----------------cc---CHHHHHHHHHHHHHHhCCCCCCceeecCCCC
Confidence            999876532     0                 11   12356789999999999985     999986

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.90  E-value=2e-08  Score=77.42  Aligned_cols=120  Identities=13%  Similarity=0.085  Sum_probs=87.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC------ChH-HHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH------SDA-EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~------~~~-~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~  145 (258)
                      .+++|+-+.++.+.+.+       ..+++|.-.+..      +.. ...+..+|+.++..+ +--.|..-+=+..+.+..
T Consensus         3 ~i~~GAEa~i~~~~~~g-------~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a-~~~GV~~P~v~dvD~~~~   74 (204)
T COG3642           3 LIKQGAEAIIYLTDFLG-------LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKA-REAGVPVPIVYDVDPDNG   74 (204)
T ss_pred             hhhCCcceeEEeeeccC-------cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHH-HHcCCCCCeEEEEcCCCC
Confidence            56789999999997753       456666643221      111 135678999999998 554554444455566777


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      .|+|||++|-.|.+++...                        ...++..+-.-+.-||..||+|+||.           
T Consensus        75 ~I~me~I~G~~lkd~l~~~------------------------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~i  130 (204)
T COG3642          75 LIVMEYIEGELLKDALEEA------------------------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGRI  130 (204)
T ss_pred             EEEEEEeCChhHHHHHHhc------------------------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCcE
Confidence            8999999998888888753                        24567777788889999999999995           


Q ss_pred             -ccCCCcceee
Q psy12228        215 -FIGFDLCILV  224 (258)
Q Consensus       215 -i~dfgl~~~~  224 (258)
                       ++||||+...
T Consensus       131 ~~IDfGLg~~s  141 (204)
T COG3642         131 YFIDFGLGEFS  141 (204)
T ss_pred             EEEECCccccc
Confidence             6899999853

>KOG1266|consensus

Probab=98.78  E-value=7.3e-09  Score=86.10  Aligned_cols=122  Identities=17%  Similarity=0.224  Sum_probs=89.5

Q ss_pred             HHHHHHhcCCCcccceeeeEEcCC-----cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q psy12228        120 MEMMKMIGQHINIINLLGVCTQDG-----PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY  194 (258)
Q Consensus       120 ~~~l~~l~~h~nIv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  194 (258)
                      +..+-.+ .|.|||+++.|+.+..     ...++.|||..|+|.++|++...             +.+.+......+|+.
T Consensus       118 Fdnllql-vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~-------------~~~a~~~~~wkkw~t  183 (458)
T KOG1266|consen  118 FDNLLQL-VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK-------------NQKALFQKAWKKWCT  183 (458)
T ss_pred             HHHHHHH-HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH-------------hhhhhhHHHHHHHHH
Confidence            3455566 7999999999987543     58899999999999999998654             345688999999999


Q ss_pred             HHHHHHHHHhhC--CccccCccc----------cCCCcceeeecc----------CCccccccccccccccccCCCCccc
Q psy12228        195 QVANGMHYLQSR--KVGNDAVRF----------IGFDLCILVFFH----------DSTLLKTTSTIASLILRNQKVSVLL  252 (258)
Q Consensus       195 qi~~gl~yLH~~--~iiH~DlKi----------~dfgl~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~s~~~  252 (258)
                      ||+.||.|||+.  .|+|+++.+          +-.|.......+          .....+-++|.|||.=..-..+.++
T Consensus       184 qIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~  263 (458)
T KOG1266|consen  184 QILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGAS  263 (458)
T ss_pred             HHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccch
Confidence            999999999998  799999852          111221111111          1234556889999986666666777


Q ss_pred             cee
Q psy12228        253 DLI  255 (258)
Q Consensus       253 Dv~  255 (258)
                      ||.
T Consensus       264 dIy  266 (458)
T KOG1266|consen  264 DIY  266 (458)
T ss_pred             hhh
Confidence            764

>KOG0601|consensus

Probab=98.72  E-value=8.1e-09  Score=91.69  Aligned_cols=161  Identities=15%  Similarity=0.103  Sum_probs=122.6

Q ss_pred             eeee--cCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIK--CAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~--G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      -+|+  |.+|.||.+....   ..++..+|+|.-+... ......+=.+|+.....+..|+|.++.+..+...+..++-+
T Consensus       121 ~~g~~~g~~~s~~~~~~~~---~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqt  197 (524)
T KOG0601|consen  121 RTGSLPGSKGSVFKSRCTN---SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQT  197 (524)
T ss_pred             ccccCCCCCceeecccCCc---ccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeee
Confidence            5788  9999999998821   1567889999854322 22333344578888888888999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHhhCCccccCcc-----------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN----GMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----gl~yLH~~~iiH~DlK-----------  214 (258)
                      |+|.+ +|..+......                .++...++....+...    ||.++|+.+++|.|+|           
T Consensus       198 E~~~~-sl~~~~~~~~~----------------~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~  260 (524)
T KOG0601|consen  198 ELCGE-SLQSYCHTPCN----------------FLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWT  260 (524)
T ss_pred             ccccc-hhHHhhhcccc----------------cCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccc
Confidence            99974 88887765442                3778888888888888    9999999999999996           


Q ss_pred             ---ccCCCcceeeeccC--------CccccccccccccccccCCCCcccce
Q psy12228        215 ---FIGFDLCILVFFHD--------STLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                         +.|||+........        ....|...|++||.+++ .++.++||
T Consensus       261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di  310 (524)
T KOG0601|consen  261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDI  310 (524)
T ss_pred             eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhh
Confidence               56788776554443        12256678999999877 56666665

>KOG1243|consensus

Probab=98.67  E-value=1.4e-07  Score=85.10  Aligned_cols=96  Identities=19%  Similarity=0.293  Sum_probs=80.6

Q ss_pred             CceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCC
Q psy12228         94 GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESP  173 (258)
Q Consensus        94 ~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~  173 (258)
                      .++.+|.|...+.... .......+.++.|+.+ +||||++++..+...+..|||+|-+.  .|..+++.          
T Consensus        35 ~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~----------  100 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTL-RHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE----------  100 (690)
T ss_pred             ccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhc-cCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH----------
Confidence            4678888888876533 3445567888999999 99999999999999999999999885  78888877          


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-hCCccccCc
Q psy12228        174 LGSAYTNGNVLTEKDLISFAYQVANGMHYLQ-SRKVGNDAV  213 (258)
Q Consensus       174 ~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH-~~~iiH~Dl  213 (258)
                                +....+..-+.||+.||.||| .++++|++|
T Consensus       101 ----------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv  131 (690)
T KOG1243|consen  101 ----------LGKEEVCLGLFQILAALSFLNDDCNLVHGNV  131 (690)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhccCCeeeccE
Confidence                      455677788899999999997 579999999

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.57  E-value=2.7e-06  Score=70.80  Aligned_cols=119  Identities=9%  Similarity=0.056  Sum_probs=80.3

Q ss_pred             cCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHH----------HHHHHHHHHHHhcCCCcc--cceeeeEEc---
Q psy12228         77 CAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM----------DLVSEMEMMKMIGQHINI--INLLGVCTQ---  141 (258)
Q Consensus        77 G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~----------~~~~E~~~l~~l~~h~nI--v~l~~~~~~---  141 (258)
                      -....|.+.++.       |+.+.||...........+          .+.+|...+..+ ...+|  +..+++...   
T Consensus        33 ~~~rrvvr~~~~-------g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L-~~~GIptP~pVa~~e~~~~  104 (268)
T PRK15123         33 LEGRRTLRFELA-------GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRL-HEVGVDTMTGVAFGERGSN  104 (268)
T ss_pred             CCCceEEEEEEC-------CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHH-HHcCCCCCCeeEEEEecCC
Confidence            333456666654       3678999775432111111          377888888877 43333  344555543   


Q ss_pred             --CCcEEEEEEeCCCC-CHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCccccCC
Q psy12228        142 --DGPLYVIVEFAPHG-NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGF  218 (258)
Q Consensus       142 --~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlKi~df  218 (258)
                        ...-+||||++++- +|.+++.....               ...+......++.+++..+.-||..||+|+|+++++|
T Consensus       105 ~~~~~s~LVte~l~~~~sL~~~~~~~~~---------------~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~Ni  169 (268)
T PRK15123        105 PATRTSFIITEDLAPTISLEDYCADWAT---------------NPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHF  169 (268)
T ss_pred             CccceeEEEEeeCCCCccHHHHHHhhcc---------------cCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhE
Confidence              22468999999985 89999864321               1256677789999999999999999999999987666

>KOG0601|consensus

Probab=98.56  E-value=9.4e-08  Score=85.03  Aligned_cols=166  Identities=15%  Similarity=0.100  Sum_probs=117.0

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ..-..||.|.|+.|+.+..+.    ..+..+++|.+.+... ..+...-+.|+.+...++.|.+++..+..+......++
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r~----~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i  343 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKRP----EGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI  343 (524)
T ss_pred             ceeEEccCCccccceeeeecC----CCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence            333468999999999887541    4568899998865432 22222345677777777789999998887777777789


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCccc------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRF------------  215 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlKi------------  215 (258)
                      -.|||.++++...+.-...                 +.+...+.+..|++.++.++|++.++|+|+|+            
T Consensus       344 p~e~~~~~s~~l~~~~~~~-----------------~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~  406 (524)
T KOG0601|consen  344 PLEFCEGGSSSLRSVTSQM-----------------LDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFS  406 (524)
T ss_pred             chhhhcCcchhhhhHHHHh-----------------cCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhh
Confidence            9999999998877744333                 88889999999999999999999999999973            


Q ss_pred             --cCCCcceeeeccCCccccccccc--cccccccCCCCccccee
Q psy12228        216 --IGFDLCILVFFHDSTLLKTTSTI--ASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 --~dfgl~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~~~Dv~  255 (258)
                        .|||....+.........+-++.  +|+......+-.+.|++
T Consensus       407 ~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~  450 (524)
T KOG0601|consen  407 KLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIF  450 (524)
T ss_pred             hccccccccccceecccccccccccccchhhccccccccccccc
Confidence              34454443222233444445555  45555555666666654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.52  E-value=3.9e-07  Score=73.30  Aligned_cols=111  Identities=15%  Similarity=0.170  Sum_probs=84.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC--CcccceeeeEEcC---CcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH--INIINLLGVCTQD---GPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~nIv~l~~~~~~~---~~~~l  147 (258)
                      .|+.|..+.||++...      ++..+++|.............+..|+.+++.+ .+  .++.+++.+....   +..++
T Consensus         5 ~l~~G~~n~~~~v~~~------~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~vp~~~~~~~~~~~~~~~~~   77 (223)
T cd05154           5 QLSGGQSNLTYLLTAG------GGRRLVLRRPPPGALLPSAHDVAREYRVLRAL-AGTGVPVPKVLALCEDPSVLGTPFY   77 (223)
T ss_pred             ecCCCccceEEEEEec------CCcceEEEeCCCcccCcccccHHHHHHHHHHh-hCCCCCCCCEEEECCCCCccCCceE
Confidence            5789999999999875      25789999986542222345688999999999 44  3467777776653   25689


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      ||||+++.++.+.+.. ..                 ++..+...++.+++.+|.+||+...
T Consensus        78 v~e~i~G~~l~~~~~~-~~-----------------~~~~~~~~i~~~i~~~l~~lH~~~~  120 (223)
T cd05154          78 VMERVDGRVLRDRLLR-PE-----------------LSPEERRALARALADTLAALHSVDP  120 (223)
T ss_pred             EEEEeCCEecCCCCCC-CC-----------------CCHHHHHHHHHHHHHHHHHHhCCCh
Confidence            9999999888765532 22                 7888999999999999999998753

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.27  E-value=5.4e-06  Score=65.24  Aligned_cols=115  Identities=14%  Similarity=0.087  Sum_probs=69.5

Q ss_pred             EEEEEEEcccccCCceEEEEEEEecCCCC-----------------------h--HHHHHHHHHHHHHHHhcCCC--ccc
Q psy12228         81 KVICAEANGILKQGIITTVAVKMLKEGHS-----------------------D--AEMMDLVSEMEMMKMIGQHI--NII  133 (258)
Q Consensus        81 ~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----------------------~--~~~~~~~~E~~~l~~l~~h~--nIv  133 (258)
                      .||.|...      .+..+|||..+....                       .  .......+|.+.|..+ ..-  ++.
T Consensus         1 ~Vy~~~~~------~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l-~~~Gv~vP   73 (188)
T PF01163_consen    1 DVYHAIDP------DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRL-YEAGVPVP   73 (188)
T ss_dssp             EEEEEEEC------TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHC-CCTT-SS-
T ss_pred             CEEEEECC------CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHH-HHCCccCC
Confidence            37888764      557999999854210                       0  1124577899999999 544  566


Q ss_pred             ceeeeEEcCCcEEEEEEeCC--CCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HhhCCccc
Q psy12228        134 NLLGVCTQDGPLYVIVEFAP--HGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHY-LQSRKVGN  210 (258)
Q Consensus       134 ~l~~~~~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y-LH~~~iiH  210 (258)
                      +.+.+.    .-.|||||++  +..+.. |....                  ++......++.+++..+.. +|..||+|
T Consensus        74 ~p~~~~----~~~ivME~I~~~G~~~~~-l~~~~------------------~~~~~~~~~~~~il~~~~~~~~~~givH  130 (188)
T PF01163_consen   74 KPYDYN----RNVIVMEYIGEDGVPLPR-LKDVD------------------LSPEEPKELLEEILEEIIKMLHKAGIVH  130 (188)
T ss_dssp             -EEEEE----TTEEEEE--EETTEEGGC-HHHCG------------------GGGSTHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred             cEEEEe----CCEEEEEecCCCccchhh-HHhcc------------------ccchhHHHHHHHHHHHHHHHHHhcCcee
Confidence            666542    3479999998  544443 33322                  2234556677788886665 57999999


Q ss_pred             cCcc------------ccCCCcceeee
Q psy12228        211 DAVR------------FIGFDLCILVF  225 (258)
Q Consensus       211 ~DlK------------i~dfgl~~~~~  225 (258)
                      +||.            ++|||.+....
T Consensus       131 GDLs~~NIlv~~~~~~iIDf~qav~~~  157 (188)
T PF01163_consen  131 GDLSEYNILVDDGKVYIIDFGQAVDSS  157 (188)
T ss_dssp             SS-STTSEEEETTCEEE--GTTEEETT
T ss_pred             cCCChhhEEeecceEEEEecCcceecC
Confidence            9994            78999887533

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3741|consensus

Probab=98.20  E-value=1.4e-05  Score=70.62  Aligned_cols=122  Identities=18%  Similarity=0.141  Sum_probs=85.8

Q ss_pred             eEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcEEEEEEeCCC-
Q psy12228         80 GKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPLYVIVEFAPH-  154 (258)
Q Consensus        80 g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~~lv~e~~~~-  154 (258)
                      ...|++...     .+|..+++|.++... .........-++.++++ .|+|||.+..++.+    +..+++|++|.|+ 
T Consensus       290 ~Ttyk~~s~-----~DG~~YvLkRlhg~r-~~~~nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s  362 (655)
T KOG3741|consen  290 ITTYKATSN-----VDGNAYVLKRLHGDR-DQSTNKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSS  362 (655)
T ss_pred             ceeEeeeec-----cCCceeeeeeecccc-ccCcccchHHHHHHHHh-ccCceeehhhhhhhhccCcceEEEEEecCCCC
Confidence            467888776     688999999994321 11111233457788999 99999999998873    4468999999986 


Q ss_pred             CCHHHHHhhcCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy12228        155 GNLRDFLRKHRPSSGYESPLG-SAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGND  211 (258)
Q Consensus       155 g~L~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~  211 (258)
                      ++|.++--......   .... ....++...++..+|.|+.|+..||.++|+.|+.-+
T Consensus       363 ~TL~d~~F~~~~~t---~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck  417 (655)
T KOG3741|consen  363 PTLYDLYFANPPFT---KRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACK  417 (655)
T ss_pred             chHHHHHccCCccc---cccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceee
Confidence            57777655433210   0000 112344558999999999999999999999987654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.99  E-value=0.00014  Score=58.25  Aligned_cols=86  Identities=14%  Similarity=0.146  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHhcCCC--cccceeeeEEcCC----cEEEEEEeCCCC-CHHHHHhhcCCCCCCCCCCCCCCCCCCCCCH
Q psy12228        114 MDLVSEMEMMKMIGQHI--NIINLLGVCTQDG----PLYVIVEFAPHG-NLRDFLRKHRPSSGYESPLGSAYTNGNVLTE  186 (258)
Q Consensus       114 ~~~~~E~~~l~~l~~h~--nIv~l~~~~~~~~----~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~  186 (258)
                      ....+|...+..+ ..-  .+++.+++.....    ..+||+|++++. +|.+++.....                 .+.
T Consensus        56 ~ra~~E~~~~~~L-~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-----------------~~~  117 (206)
T PF06293_consen   56 SRAKREWRNLQRL-REAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-----------------LDP  117 (206)
T ss_pred             hHHHHHHHHHHHH-HHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-----------------cch
Confidence            4577888877777 332  3456666665422    358999999874 79999987543                 566


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCccccCccccC
Q psy12228        187 KDLISFAYQVANGMHYLQSRKVGNDAVRFIG  217 (258)
Q Consensus       187 ~~~~~i~~qi~~gl~yLH~~~iiH~DlKi~d  217 (258)
                      .....++.+++..+.-||..||+|+|+++.+
T Consensus       118 ~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~N  148 (206)
T PF06293_consen  118 SQRRELLRALARLIAKLHDAGIYHGDLNPSN  148 (206)
T ss_pred             hhHHHHHHHHHHHHHHHHHCcCCCCCCCccc
Confidence            7788999999999999999999999997443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0576|consensus

Probab=97.95  E-value=2.9e-06  Score=76.68  Aligned_cols=152  Identities=11%  Similarity=0.099  Sum_probs=105.7

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCc-ccceeeeEEcCCcEEEEEEeC
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHIN-IINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~n-Iv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .++|+++++++.+..      ..+....+.+...      ....-++++|.++ +||| .+..++-+..+...++.++++
T Consensus       250 fvK~altknpKkRpt------aeklL~h~fvs~~------l~~rl~~eLLdK~-n~P~~~v~~~~d~~~E~~~~i~~~i~  316 (829)
T KOG0576|consen  250 FVKGALTKNPKKRPT------AEKLLQHPFVSQT------LSRRLAIELLDKV-NNPNPVVRYLEDYDGEDYLWIPMRIC  316 (829)
T ss_pred             HHHHHhcCCCccCCC------hhhheeceeeccc------hhhHHHHHHHHHc-cCCCCcccccccCCcccccchhhhhh
Confidence            578999999987764      2233446666432      2344678899999 9999 666666666677889999999


Q ss_pred             CCC-CHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccC--c------cccCCCccee
Q psy12228        153 PHG-NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDA--V------RFIGFDLCIL  223 (258)
Q Consensus       153 ~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~D--l------Ki~dfgl~~~  223 (258)
                      ..| +-..-.....                ..+...+...+.+.-++++++||+..-+|+|  +      |..+|+....
T Consensus       317 s~~rs~~~~~~~se----------------~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d~~l~s~~~~~~~~~~v~~~  380 (829)
T KOG0576|consen  317 STGRSSALEMTVSE----------------IALEQYQFAYPLRKETRPLAELHSSYKVHRDNILGSEEEVKLLDFAVPPQ  380 (829)
T ss_pred             cCCccccccCChhh----------------HhhhhhhhhhhhhhhcccccccccccccCcccccccccccccccccCCcc
Confidence            876 2111111100                1144455566677778899999999888997  2      6778887765


Q ss_pred             eecc--CCccccccccccccccccCCCCcccce
Q psy12228        224 VFFH--DSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       224 ~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      +...  ..+..+++.|+|||+.....+....|+
T Consensus       381 L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~  413 (829)
T KOG0576|consen  381 LTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDS  413 (829)
T ss_pred             cCcccccccCCCCCCCCCchhhcccccccCCCc
Confidence            5444  578899999999999888777766654

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.86  E-value=6.7e-05  Score=57.78  Aligned_cols=114  Identities=17%  Similarity=0.189  Sum_probs=77.7

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCccc-ceeeeEEcCCcEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINII-NLLGVCTQDGPLYVIV  149 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv-~l~~~~~~~~~~~lv~  149 (258)
                      ...||+|.+|.||+|.+.+       ..+|+|+-+.+   +-+..+..|+++|..+ .-.++. ++|.+..+    .+.|
T Consensus        27 ~~~L~KG~~s~Vyl~~~~~-------~~~a~Kvrr~d---s~r~~l~kEakiLeil-~g~~~~p~vy~yg~~----~i~m   91 (201)
T COG2112          27 EKELAKGTTSVVYLGEWRG-------GEVALKVRRRD---SPRRNLEKEAKILEIL-AGEGVTPEVYFYGED----FIRM   91 (201)
T ss_pred             hhhhhcccccEEEEeeccC-------ceEEEEEecCC---cchhhHHHHHHHHHHh-hhcCCCceEEEechh----hhhh
Confidence            3378999999999999974       68999998754   4456788999999998 665554 45555332    3559


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc--------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV--------------RF  215 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl--------------Ki  215 (258)
                      ||+.|-.|.+.-..                    .+...+.    .++..-.-|-..||-|+.|              =|
T Consensus        92 e~i~G~~L~~~~~~--------------------~~rk~l~----~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~i  147 (201)
T COG2112          92 EYIDGRPLGKLEIG--------------------GDRKHLL----RVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYI  147 (201)
T ss_pred             hhhcCcchhhhhhc--------------------ccHHHHH----HHHHHHHHHHHhccchhhhcCCceeEEecCCcEEE
Confidence            99998787765432                    1223333    3334433445567777766              28


Q ss_pred             cCCCccee
Q psy12228        216 IGFDLCIL  223 (258)
Q Consensus       216 ~dfgl~~~  223 (258)
                      +||+-|..
T Consensus       148 IDFd~At~  155 (201)
T COG2112         148 IDFDSATF  155 (201)
T ss_pred             EEccchhh
Confidence            89998874

>PRK09902 hypothetical protein; Provisional

Probab=97.75  E-value=0.00068  Score=54.09  Aligned_cols=121  Identities=13%  Similarity=0.125  Sum_probs=83.2

Q ss_pred             eecCceEEEEEEEcccccCCceEEEEEEEecCCCC-----hHHHHHHHHHHHHHHHhcCCCc--ccceeeeEEc--C--C
Q psy12228         75 IKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-----DAEMMDLVSEMEMMKMIGQHIN--IINLLGVCTQ--D--G  143 (258)
Q Consensus        75 g~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~n--Iv~l~~~~~~--~--~  143 (258)
                      |+|+-+.|+.-...+       ..+=+|.-.....     ......|.+|+..+..+ ..-+  +.+.......  +  -
T Consensus        27 ~rgG~SgV~r~~~~g-------~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L-~~~GvPVP~pvf~~~~k~~~~~   98 (216)
T PRK09902         27 RRNGMSGVQCVERNG-------KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKEL-ERAGVIVPKIVFGEAVKIEGEW   98 (216)
T ss_pred             CCCCcceEEEEEeCC-------cEEEEEeccCcccccccCCCCchHHHHHHHHHHHH-HHcCCCCCccceeeeeccCCce
Confidence            568888888877653       3577777652211     22456799999999988 4322  3444422111  1  1


Q ss_pred             cEEEEEEeCCC-CCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCccccCC
Q psy12228        144 PLYVIVEFAPH-GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGF  218 (258)
Q Consensus       144 ~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlKi~df  218 (258)
                      ...||+|-+++ -+|.+++.....               ...+......+..+++..+.-||+.|+.|+|+-+.|+
T Consensus        99 rA~LVTe~L~g~~~L~~~l~~~~~---------------~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khI  159 (216)
T PRK09902         99 RALLVTEDMAGFISIADWYAQHAV---------------SPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHI  159 (216)
T ss_pred             EEEEEEEeCCCCccHHHHHhcCCc---------------CCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhhe
Confidence            36799997763 489988866432               2257777889999999999999999999999966555

>KOG0606|consensus

Probab=97.73  E-value=3.9e-06  Score=79.47  Aligned_cols=158  Identities=13%  Similarity=0.100  Sum_probs=106.2

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      +-+|+++.++.+.-.     .++...+.|+.....  ...+.+....+-.++-.. ++|-++.....+......+|+++|
T Consensus       812 ~qS~sp~ss~p~~pa-----~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p-~~P~v~~~~~s~~~rsP~~L~~~~  885 (1205)
T KOG0606|consen  812 SQSGSPSSSFPASPA-----GSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITP-RSPAVVRSFPSFPCRSPLPLVGHY  885 (1205)
T ss_pred             ccCCCCcccccCCcc-----ccccccchhhhccchhhccccccccCCccCccccC-CCCceecccCCCCCCCCcchhhHH
Confidence            447888888877655     344445555443211  111122223333333233 567777666555566788999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +.+++|...|+..+.                 .+.+-.+.+...+..+++|||+..+.|+|+|             +.+|
T Consensus       886 ~~~~~~~Skl~~~~~-----------------~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~  948 (1205)
T KOG0606|consen  886 LNGGDLPSKLHNSGC-----------------LSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDF  948 (1205)
T ss_pred             hccCCchhhhhcCCC-----------------cccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcc
Confidence            999999999998775                 5666667777888999999999999999995             5666


Q ss_pred             Ccceeeec----------------------------------cCCccccccccccccccccCCCCcccce
Q psy12228        219 DLCILVFF----------------------------------HDSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       219 gl~~~~~~----------------------------------~~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      |.......                                  ......||+.|.|||.+.+......+|+
T Consensus       949 ~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~ 1018 (1205)
T KOG0606|consen  949 GTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADW 1018 (1205)
T ss_pred             ccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchh
Confidence            52211100                                  0125688999999999999888888884

>PLN02876 acyl-CoA dehydrogenase

Probab=97.48  E-value=0.00091  Score=64.56  Aligned_cols=113  Identities=13%  Similarity=0.181  Sum_probs=77.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcc--cceeeeEEcC---CcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINI--INLLGVCTQD---GPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nI--v~l~~~~~~~---~~~~l  147 (258)
                      .++.|.+..+|+....+   ......+++|+............+.+|+.+|+.+..|.++  .+++++|.+.   +..++
T Consensus        45 ~l~gG~sn~ty~l~~~~---~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl  121 (822)
T PLN02876         45 QFGHGQSNPTFLLEVGN---GGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY  121 (822)
T ss_pred             EeCCCCcCceEEEEECC---CCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence            67889999999887642   0112467778765432222234688999999999446655  7888888764   46789


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK  207 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~  207 (258)
                      ||||+++..+.+    ...               ..++..+...++.+++.+|..||+..
T Consensus       122 VME~v~G~~~~~----~~~---------------~~~~~~~r~~l~~~l~~~La~LH~vd  162 (822)
T PLN02876        122 IMEYLEGRIFVD----PKL---------------PGVAPERRRAIYRATAKVLAALHSAD  162 (822)
T ss_pred             EEEecCCcccCC----ccC---------------CCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999743321    100               12567788889999999999999864

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.47  E-value=0.0021  Score=51.07  Aligned_cols=118  Identities=14%  Similarity=0.150  Sum_probs=84.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---------------ChHHHHHHHHHHHHHHHhcC------C
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---------------SDAEMMDLVSEMEMMKMIGQ------H  129 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~E~~~l~~l~~------h  129 (258)
                      ...||+|+.-.||.--        ......||+.....               ......+..+|+.....+ .      +
T Consensus         6 ~~~i~~G~~R~cy~HP--------~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l-~~~~~~~~   76 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHP--------DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQL-SLRRGVDW   76 (199)
T ss_pred             CcccccCCCceEEECC--------CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHH-hhccCCcc
Confidence            4489999999999532        22557889887653               112245677888777777 4      7


Q ss_pred             CcccceeeeEEcCCcEEEEEEeCCC------CCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy12228        130 INIINLLGVCTQDGPLYVIVEFAPH------GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYL  203 (258)
Q Consensus       130 ~nIv~l~~~~~~~~~~~lv~e~~~~------g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yL  203 (258)
                      .+|.+++|+.+++.-..+|+|.+.+      -+|.++++...                  ++. .+.   ..+-.-..||
T Consensus        77 ~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~------------------~~~-~~~---~~L~~f~~~l  134 (199)
T PF10707_consen   77 SHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG------------------LTE-ELR---QALDEFKRYL  134 (199)
T ss_pred             cccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC------------------ccH-HHH---HHHHHHHHHH
Confidence            8999999999999888999998643      36888885543                  555 333   3333445688


Q ss_pred             hhCCccccCccccCCC
Q psy12228        204 QSRKVGNDAVRFIGFD  219 (258)
Q Consensus       204 H~~~iiH~DlKi~dfg  219 (258)
                      -+.+|+.+|+++.++=
T Consensus       135 ~~~~Iv~~dl~~~NIv  150 (199)
T PF10707_consen  135 LDHHIVIRDLNPHNIV  150 (199)
T ss_pred             HHcCCeecCCCcccEE
Confidence            8999999999987753

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.45  E-value=0.001  Score=54.86  Aligned_cols=114  Identities=14%  Similarity=0.073  Sum_probs=75.0

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-------------------C--hHHHHHHHHHHHHHHHhc
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-------------------S--DAEMMDLVSEMEMMKMIG  127 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-------------------~--~~~~~~~~~E~~~l~~l~  127 (258)
                      .....||-|.-+.||.|...      .+.++|||.=+...                   +  .-.+....+|.++|..|.
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~------~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~  167 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDP------KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLY  167 (304)
T ss_pred             hhccccccCccceEEEEECC------CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhh
Confidence            34568999999999999875      67899999754321                   0  011344678999999992


Q ss_pred             CC-CcccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC
Q psy12228        128 QH-INIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR  206 (258)
Q Consensus       128 ~h-~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~  206 (258)
                      .. -.+.+.+++    +.-++|||++++-.|... .                     ++....-.++..|+.-+.-+-..
T Consensus       168 ~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~-r---------------------~~~en~~~il~~il~~~~~~~~~  221 (304)
T COG0478         168 PEGVKVPKPIAW----NRHAVVMEYIEGVELYRL-R---------------------LDVENPDEILDKILEEVRKAYRR  221 (304)
T ss_pred             hcCCCCCCcccc----ccceeeeehcccceeecc-c---------------------CcccCHHHHHHHHHHHHHHHHHc
Confidence            22 255555554    456899999998544321 1                     22334444555555555555589


Q ss_pred             CccccCcc
Q psy12228        207 KVGNDAVR  214 (258)
Q Consensus       207 ~iiH~DlK  214 (258)
                      |+||+|+.
T Consensus       222 GiVHGDlS  229 (304)
T COG0478         222 GIVHGDLS  229 (304)
T ss_pred             CccccCCc
Confidence            99999994

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.42  E-value=0.003  Score=50.11  Aligned_cols=112  Identities=15%  Similarity=0.200  Sum_probs=75.3

Q ss_pred             eeeecCc-eEEEEEEEcccccCCceEEEEEEEecC---CC--------Ch---------HHHHHHHHHHHHHHHhc--CC
Q psy12228         73 VKIKCAF-GKVICAEANGILKQGIITTVAVKMLKE---GH--------SD---------AEMMDLVSEMEMMKMIG--QH  129 (258)
Q Consensus        73 ~ig~G~f-g~V~~~~~~~~~~~~~~~~vavK~~~~---~~--------~~---------~~~~~~~~E~~~l~~l~--~h  129 (258)
                      .||.|.- |.||+++..+       ..+|+|+++.   ..        ..         ....-|..|.+...+|.  .+
T Consensus        44 fLg~g~~~~~V~kv~I~g-------~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   44 FLGHGSHDGYVFKVEIDG-------RIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             ecCCCCceeEEEEEEECC-------eEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            7899999 9999999864       7999999421   00        00         11245788888887773  23


Q ss_pred             Ccc--cceeeeEEcCC------------------cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHH
Q psy12228        130 INI--INLLGVCTQDG------------------PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL  189 (258)
Q Consensus       130 ~nI--v~l~~~~~~~~------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~  189 (258)
                      .++  |+++||..-..                  ...||.||.+...         .                 ++..+ 
T Consensus       117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~-----------------~~~~~-  169 (207)
T PF13095_consen  117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------P-----------------LQIRD-  169 (207)
T ss_pred             cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------c-----------------cchhH-
Confidence            455  89999884321                  1356777666532         1                 33334 


Q ss_pred             HHHHHHHHHHHHHHhhCCccccCcc--------ccCCCcc
Q psy12228        190 ISFAYQVANGMHYLQSRKVGNDAVR--------FIGFDLC  221 (258)
Q Consensus       190 ~~i~~qi~~gl~yLH~~~iiH~DlK--------i~dfgl~  221 (258)
                         +.+|.+-|.-+|..||+-+|+|        ++|||.+
T Consensus       170 ---~~~~~~dl~~~~k~gI~~~Dv~~~ny~~G~lvDfs~~  206 (207)
T PF13095_consen  170 ---IPQMLRDLKILHKLGIVPRDVKPRNYRGGKLVDFSSS  206 (207)
T ss_pred             ---HHHHHHHHHHHHHCCeeeccCccccccCCEEEecccC
Confidence               3566677889999999999996        6777653

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.41  E-value=0.0011  Score=60.08  Aligned_cols=129  Identities=13%  Similarity=0.067  Sum_probs=78.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH---------------------------------------H
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA---------------------------------------E  112 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------------------------~  112 (258)
                      ..|+.++-|.||+|+++      +|+.||||+.+++....                                       .
T Consensus       131 ~PiAsASIaQVH~A~L~------sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~  204 (517)
T COG0661         131 EPIASASIAQVHRAVLK------SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE  204 (517)
T ss_pred             CchhhhhHhhheeEEec------CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence            47899999999999997      58999999997752110                                       0


Q ss_pred             HHHHHHHHHHHHHhc---CCCcccceeeeEEc-CCcEEEEEEeCCCCCHHHHH--hhcCCCCCCCCCCCCCCCCCCCCCH
Q psy12228        113 MMDLVSEMEMMKMIG---QHINIINLLGVCTQ-DGPLYVIVEFAPHGNLRDFL--RKHRPSSGYESPLGSAYTNGNVLTE  186 (258)
Q Consensus       113 ~~~~~~E~~~l~~l~---~h~nIv~l~~~~~~-~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~  186 (258)
                      .-++.+|+..+..++   +...=+.+-.++.+ .+.-.|+|||++|-.+.+..  +..+                  ++.
T Consensus       205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g------------------~d~  266 (517)
T COG0661         205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG------------------IDR  266 (517)
T ss_pred             HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC------------------CCH
Confidence            112455666665553   12222333333322 34568999999998888874  3322                  454


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCcceeeec
Q psy12228        187 KDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILVFF  226 (258)
Q Consensus       187 ~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~  226 (258)
                      +.+.....++  -+.-+-..|++|.|.-             +.|||+......
T Consensus       267 k~ia~~~~~~--f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         267 KELAELLVRA--FLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HHHHHHHHHH--HHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            4433322222  2333345799999983             568998775443

>PRK10593 hypothetical protein; Provisional

Probab=97.31  E-value=0.0026  Score=53.86  Aligned_cols=102  Identities=13%  Similarity=0.073  Sum_probs=72.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC--CcccceeeeEEc---CCcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH--INIINLLGVCTQ---DGPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~nIv~l~~~~~~---~~~~~l  147 (258)
                      .||.|..+.||.....      . ..+.+|..+.. .  ....+..|...|+.+..+  -.+.++++++..   .+..+|
T Consensus        21 ~i~~G~~~~vy~~~~~------~-~~~~~k~~~~~-~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~L   90 (297)
T PRK10593         21 CISEQPYAALWALYDS------Q-GNPMPLMARSF-S--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVL   90 (297)
T ss_pred             ecCCccceeEEEEEcC------C-CCEEEEEeccc-c--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEE
Confidence            6899999999987653      2 24667775431 1  124688999999998554  367889988764   356899


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR  206 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~  206 (258)
                      |||+++++++.+.     .                 .+......+..+++.+|.-||+.
T Consensus        91 VmE~i~G~~~~~~-----~-----------------~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         91 LLERLRGVSVEAP-----A-----------------RTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             EEeccCCEecCCC-----C-----------------CCHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999777641     1                 23344556677888888888874

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.25  E-value=0.003  Score=51.49  Aligned_cols=125  Identities=14%  Similarity=0.073  Sum_probs=79.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH------------------H-----HHHHHHHHHHHHHhcC-
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA------------------E-----MMDLVSEMEMMKMIGQ-  128 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------~-----~~~~~~E~~~l~~l~~-  128 (258)
                      .|..|.-+.||+|...      ++..+|+|+.+......                  .     ..-..+|+..|+++.. 
T Consensus        55 ~istGKEA~Vy~a~~~------~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA  128 (268)
T COG1718          55 CISTGKEANVYLAETG------DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA  128 (268)
T ss_pred             eecCCcceEEEeeccC------CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            5778888999998863      56899999996532110                  0     0123567777777621 


Q ss_pred             CCcccceeeeEEcCCcEEEEEEeCCCCC-HHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-C
Q psy12228        129 HINIINLLGVCTQDGPLYVIVEFAPHGN-LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-R  206 (258)
Q Consensus       129 h~nIv~l~~~~~~~~~~~lv~e~~~~g~-L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~  206 (258)
                      +-.+.+-+++.    .-.|||||+.... -.-.|+.                  .++...+...+..++++.|.-|-. .
T Consensus       129 GVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD------------------v~~e~~e~~~~~~~~v~~~~~l~~~a  186 (268)
T COG1718         129 GVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD------------------VPLELEEAEGLYEDVVEYMRRLYKEA  186 (268)
T ss_pred             CCCCCCceeec----CCeEEEEeccCCCCCCCCccc------------------CCcCchhHHHHHHHHHHHHHHHHHhc
Confidence            23333444433    3469999996521 1111111                  113333677788888899988876 8


Q ss_pred             CccccCcc------------ccCCCcceeee
Q psy12228        207 KVGNDAVR------------FIGFDLCILVF  225 (258)
Q Consensus       207 ~iiH~DlK------------i~dfgl~~~~~  225 (258)
                      ++||+||.            ++|||-|....
T Consensus       187 ~LVHgDLSEyNiL~~~~~p~iID~~QaV~~~  217 (268)
T COG1718         187 GLVHGDLSEYNILVHDGEPYIIDVSQAVTID  217 (268)
T ss_pred             CcccccchhhheEEECCeEEEEECccccccC
Confidence            99999994            78888877544

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.03  E-value=0.011  Score=47.49  Aligned_cols=102  Identities=17%  Similarity=0.228  Sum_probs=75.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC-CcccceeeeEEc---CCcEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH-INIINLLGVCTQ---DGPLYVI  148 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-~nIv~l~~~~~~---~~~~~lv  148 (258)
                      .++.|..+.||.....      . ..+++|.....   .....+.+|..++..+..+ ..+.+++.....   ....+++
T Consensus         4 ~l~~G~~n~~~~v~~~------~-~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~   73 (239)
T PF01636_consen    4 PLSGGFSNRVYRVTTD------D-GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLL   73 (239)
T ss_dssp             EEEESSSSEEEEEEET------T-SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEE
T ss_pred             cCCCCCeeeEEEEEEC------C-cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEE
Confidence            6889999999999875      2 48999998643   4456788899998888433 235677765433   2347899


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK  207 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~  207 (258)
                      |+++++..+..      .                 .+......++.+++..|..||+..
T Consensus        74 ~~~i~g~~~~~------~-----------------~~~~~~~~~~~~~~~~l~~lh~~~  109 (239)
T PF01636_consen   74 MEYIPGRPLDD------E-----------------LSPEQRPELLRQLGRALAQLHQVP  109 (239)
T ss_dssp             EEEESSEEHHH------T-----------------STHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             EEEeccccccc------c-----------------ccccccccccccchhhhhhccccc
Confidence            99999988776      2                 677788888888889999998873

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.03  E-value=0.0015  Score=51.41  Aligned_cols=84  Identities=18%  Similarity=0.170  Sum_probs=64.2

Q ss_pred             HHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeCCCCCHHHH---HhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q psy12228        118 SEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDF---LRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY  194 (258)
Q Consensus       118 ~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~---l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  194 (258)
                      .|.-+|+.+...+++++++|+|-    -.++.||...+++...   +....                 ..+|..+.+||.
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~-----------------~~~w~~R~~iA~   66 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFL-----------------QSPWEQRAKIAL   66 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCcccccccccccccc-----------------ccCHHHHHHHHH
Confidence            58888999954479999999993    2578999987766432   11111                 269999999999


Q ss_pred             HHHHHHHHHhh---CCccccCccccCCCcce
Q psy12228        195 QVANGMHYLQS---RKVGNDAVRFIGFDLCI  222 (258)
Q Consensus       195 qi~~gl~yLH~---~~iiH~DlKi~dfgl~~  222 (258)
                      +++..+.+|+.   ..+.-.|+++.+||+..
T Consensus        67 ~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~   97 (188)
T PF12260_consen   67 QLLELLEELDHGPLGFFYLCDVSPDNFGVND   97 (188)
T ss_pred             HHHHHHHHHhcCCCCcEEEeecchHHeEEeC
Confidence            99999999988   35566799888888764

Proteins in this uncharacterised family are described as transmembrane proteins.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.02  E-value=0.0083  Score=48.24  Aligned_cols=98  Identities=11%  Similarity=0.095  Sum_probs=57.5

Q ss_pred             ceEEEEEEEecCCCChHHH--HH------HHHHHHHHHHhcCC---CcccceeeeEEc-----CCcEEEEEEeCCCCCHH
Q psy12228         95 IITTVAVKMLKEGHSDAEM--MD------LVSEMEMMKMIGQH---INIINLLGVCTQ-----DGPLYVIVEFAPHGNLR  158 (258)
Q Consensus        95 ~~~~vavK~~~~~~~~~~~--~~------~~~E~~~l~~l~~h---~nIv~l~~~~~~-----~~~~~lv~e~~~~g~L~  158 (258)
                      ++..+++|..+......++  ..      ..+++..+..+ ..   .....++.+..-     ....+++|||++|-.|.
T Consensus        53 ~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i-~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~  131 (229)
T PF06176_consen   53 DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKI-RNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELN  131 (229)
T ss_pred             CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHH-HHcCccccccceeeeeeeeccceeEEEEEEEEecCeecc
Confidence            3578899988765322221  11      12334434444 22   222333333221     23456899999997776


Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCccccCC
Q psy12228        159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGF  218 (258)
Q Consensus       159 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlKi~df  218 (258)
                      ++..                     +++    .++..+..+|.-||..|+.|+|..+.+|
T Consensus       132 d~~~---------------------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNF  166 (229)
T PF06176_consen  132 DIED---------------------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNF  166 (229)
T ss_pred             cchh---------------------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcE
Confidence            5432                     333    2445677889999999999999976665

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.88  E-value=0.018  Score=46.81  Aligned_cols=103  Identities=15%  Similarity=0.113  Sum_probs=71.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC-CcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH-INIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|..+.||+..         +..+++|........   ....+|.++++.+... -.+.+.+++....+...+|||+
T Consensus         8 ~i~~G~t~~~y~~~---------~~~~VlR~~~~~~~~---~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~   75 (226)
T TIGR02172         8 QTGEGGNGESYTHK---------TGKWMLKLYNPGFDK---ETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYEL   75 (226)
T ss_pred             eecCCCCcceeEec---------CCCEEEEeCCCCCCH---HHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeee
Confidence            78999999999732         235778988754322   3467899999988322 2356788888777778899999


Q ss_pred             CCCCC-HHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        152 APHGN-LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       152 ~~~g~-L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      ++|.+ +...+.                     .+......++.+++..+.-||+..+
T Consensus        76 i~G~~~~~~~~~---------------------~~~~~~~~l~~~la~~l~~lH~~~~  112 (226)
T TIGR02172        76 IVGKRSFSRIIS---------------------DNPSRLEEIAKIFAEMAKKLHSTKC  112 (226)
T ss_pred             cCCccchhhhhc---------------------CCHHHHHHHHHHHHHHHHHHhCCCC
Confidence            99853 322221                     3445566778888888888887543

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1235|consensus

Probab=96.40  E-value=0.018  Score=52.31  Aligned_cols=114  Identities=11%  Similarity=0.082  Sum_probs=69.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH------------------------------HH------HH
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA------------------------------EM------MD  115 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------~~------~~  115 (258)
                      ..||.-+.|.||+|+.+      +|..||||+-++.....                              ..      =+
T Consensus       167 ~piaaASlaQVhrA~L~------~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD  240 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLK------NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD  240 (538)
T ss_pred             chhhhcchhheEEEEec------CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence            46889999999999997      48999999998753111                              00      12


Q ss_pred             HHHHHHHHHHhc---CCCc------ccceeeeEEcCCcEEEEEEeCCCCCHHH--HHhhcCCCCCCCCCCCCCCCCCCCC
Q psy12228        116 LVSEMEMMKMIG---QHIN------IINLLGVCTQDGPLYVIVEFAPHGNLRD--FLRKHRPSSGYESPLGSAYTNGNVL  184 (258)
Q Consensus       116 ~~~E~~~l~~l~---~h~n------Iv~l~~~~~~~~~~~lv~e~~~~g~L~~--~l~~~~~~~~~~~~~~~~~~~~~~l  184 (258)
                      |.+|++...++.   .|-+      |.++|..+.  ..-.|+||||+|..+.+  +|.+.+                  +
T Consensus       241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~~g------------------i  300 (538)
T KOG1235|consen  241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDKRG------------------I  300 (538)
T ss_pred             hHHHHHhHHHHHHHHHhcccccceeCCeehhhcC--cceEEEEEecCCccCCCHHHHHHcC------------------C
Confidence            455555444331   3444      334433332  34689999999976554  455544                  5


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhCCccccCc
Q psy12228        185 TEKDLISFAYQVANGMHYLQSRKVGNDAV  213 (258)
Q Consensus       185 ~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl  213 (258)
                      +...+..-+.+...-+-+  ..|++|+|-
T Consensus       301 ~~~~i~~~l~~~~~~qIf--~~GffHaDP  327 (538)
T KOG1235|consen  301 SPHDILNKLVEAYLEQIF--KTGFFHADP  327 (538)
T ss_pred             CHHHHHHHHHHHHHHHHH--hcCCccCCC
Confidence            666555444443333333  346899886

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=96.35  E-value=0.03  Score=45.75  Aligned_cols=98  Identities=12%  Similarity=0.202  Sum_probs=65.8

Q ss_pred             eecCc-eEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeCC
Q psy12228         75 IKCAF-GKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAP  153 (258)
Q Consensus        75 g~G~f-g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~  153 (258)
                      -.|.. ..||+....       +..+.+|......    .....+|+.++..+..+--+.+++++...++..++|||+++
T Consensus         7 ~~g~~~~~v~~~~~~-------~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~   75 (244)
T cd05150           7 TEGQSGATVYRLDGK-------NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVP   75 (244)
T ss_pred             CCCCCcCeEEEEcCC-------CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeC
Confidence            34544 688887653       2568888876432    23467899999988656556678888776667899999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC
Q psy12228        154 HGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR  206 (258)
Q Consensus       154 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~  206 (258)
                      |.+|.....   .                 .   ....++.+++..|.-||+.
T Consensus        76 G~~l~~~~~---~-----------------~---~~~~~~~~l~~~l~~lH~i  105 (244)
T cd05150          76 GVPAAALWE---E-----------------L---EPERLVDALAEALRRLHAL  105 (244)
T ss_pred             CccHhHhhc---c-----------------c---CHHHHHHHHHHHHHHHhcC
Confidence            877754321   0                 1   1234567777777777765

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG2270|consensus

Probab=95.84  E-value=0.095  Score=45.54  Aligned_cols=119  Identities=14%  Similarity=0.052  Sum_probs=76.0

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC------------------------ChHHH-HHHHHHHHHH
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH------------------------SDAEM-MDLVSEMEMM  123 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~------------------------~~~~~-~~~~~E~~~l  123 (258)
                      .-+..|..|.-+.||.+.-.      +|..+|||+.+...                        ...-. --..+|+..|
T Consensus       147 ~inGCiSTGKEANVYHat~~------dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNL  220 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEE------DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNL  220 (520)
T ss_pred             ecccccccCccceeEeeecC------CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHH
Confidence            44456778889999998764      67789999986421                        00111 1234688888


Q ss_pred             HHhcCCCcccceeeeEEcCCcEEEEEEeCCCCC-HHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy12228        124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN-LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHY  202 (258)
Q Consensus       124 ~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~~g~-L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y  202 (258)
                      .++ +...|..---+.. . .-.|||+|+.... -.-.|+.                  ..++...+..+-.|++.-|.-
T Consensus       221 kRl-~~aGIP~PePIlL-k-~hVLVM~FlGrdgw~aPkLKd------------------~~ls~~ka~~~Y~~~v~~MR~  279 (520)
T KOG2270|consen  221 KRL-NNAGIPCPEPILL-K-NHVLVMEFLGRDGWAAPKLKD------------------ASLSTSKARELYQQCVRIMRR  279 (520)
T ss_pred             HHH-HhcCCCCCCceee-e-cceEeeeeccCCCCcCccccc------------------ccCChHHHHHHHHHHHHHHHH
Confidence            888 5555433222222 1 2368999996311 1111222                  237788888898999999988


Q ss_pred             H-hhCCccccCcc
Q psy12228        203 L-QSRKVGNDAVR  214 (258)
Q Consensus       203 L-H~~~iiH~DlK  214 (258)
                      | +.+++||.||.
T Consensus       280 lY~~c~LVHADLS  292 (520)
T KOG2270|consen  280 LYQKCRLVHADLS  292 (520)
T ss_pred             HHHHhceeccchh
Confidence            8 55799999993

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=95.43  E-value=0.16  Score=44.80  Aligned_cols=85  Identities=14%  Similarity=-0.039  Sum_probs=57.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-----C-hHHHHHHHHHHHHHHHhcCC--CcccceeeeEEcCCc
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-----S-DAEMMDLVSEMEMMKMIGQH--INIINLLGVCTQDGP  144 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-----~-~~~~~~~~~E~~~l~~l~~h--~nIv~l~~~~~~~~~  144 (258)
                      .||.|.+..||++...     ..++.|+||.-....     . .-..+++..|.+.|..+..+  .++++++.+  +.+.
T Consensus        33 elggGn~N~VyrV~~~-----~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~  105 (401)
T PRK09550         33 EIGDGNLNLVFRVSDT-----EGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEEL  105 (401)
T ss_pred             EcCCCceEEEEEEEeC-----CCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCC
Confidence            6899999999999875     222579999854211     1 12345677888888886443  456777776  3455


Q ss_pred             EEEEEEeCCCCC-HHHHHhhc
Q psy12228        145 LYVIVEFAPHGN-LRDFLRKH  164 (258)
Q Consensus       145 ~~lv~e~~~~g~-L~~~l~~~  164 (258)
                      .++|||++++.. +++.|...
T Consensus       106 ~~lVME~L~~~~~lr~~Ll~g  126 (401)
T PRK09550        106 AVTVMEDLSDHKILRKGLIDG  126 (401)
T ss_pred             CEEEEecCCCccHHHHHHhcC
Confidence            789999998644 55555543

>KOG2137|consensus

Probab=95.43  E-value=0.0087  Score=55.11  Aligned_cols=63  Identities=21%  Similarity=0.284  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHhhC-CccccCc-------------cccCCCcceeeeccC------------CccccccccccccccccC
Q psy12228        193 AYQVANGMHYLQSR-KVGNDAV-------------RFIGFDLCILVFFHD------------STLLKTTSTIASLILRNQ  246 (258)
Q Consensus       193 ~~qi~~gl~yLH~~-~iiH~Dl-------------Ki~dfgl~~~~~~~~------------~~~~gt~~y~aPE~~~~~  246 (258)
                      +.+++.||.|+|.. ++||++|             |++.|+++.......            ........|.|||++.+-
T Consensus       105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~  184 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT  184 (700)
T ss_pred             hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence            34556999999986 9999887             688888876544321            122334679999999987


Q ss_pred             CCCccccee
Q psy12228        247 KVSVLLDLI  255 (258)
Q Consensus       247 ~~s~~~Dv~  255 (258)
                      ..+.++|+.
T Consensus       185 ~~~~~sd~f  193 (700)
T KOG2137|consen  185 TNTPASDVF  193 (700)
T ss_pred             cccccccce
Confidence            778888864

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.70  E-value=0.02  Score=41.54  Aligned_cols=45  Identities=16%  Similarity=0.169  Sum_probs=34.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHh
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMI  126 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l  126 (258)
                      ..||.|+.|.||+|.++      +|+.||||+.++.    ..+.+...+.+|+.+
T Consensus        17 ~PlasASiaQVh~a~l~------~g~~VaVKV~rP~----i~~~i~~Dl~~l~~~   61 (119)
T PF03109_consen   17 EPLASASIAQVHRARLK------DGEEVAVKVQRPG----IEEQIEADLRILRRL   61 (119)
T ss_pred             chhhheehhhheeeeec------ccchhhhhhcchH----HHHHHHHHHHHHHHH
Confidence            37899999999999997      5799999999764    334455666666655

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG1035|consensus

Probab=93.97  E-value=0.17  Score=49.77  Aligned_cols=123  Identities=18%  Similarity=0.144  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc----EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCH
Q psy12228        111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP----LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTE  186 (258)
Q Consensus       111 ~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~  186 (258)
                      .+.....-|+..+..+ .|+|++.++.|......    ..+..|+|..-++...+.....                 ++.
T Consensus       224 ~~i~~~E~e~~~l~k~-~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~-----------------i~~  285 (1351)
T KOG1035|consen  224 KEIQTTEIELESLSKI-AHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGS-----------------IPL  285 (1351)
T ss_pred             HHHHHHHHHHHHHHhh-ccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccc-----------------cCH
Confidence            3444556788888899 99999999998765432    2345578888888888877665                 899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCccccCcc------------------ccCCCcceeeeccC--CccccccccccccccccC
Q psy12228        187 KDLISFAYQVANGMHYLQSRKVGNDAVR------------------FIGFDLCILVFFHD--STLLKTTSTIASLILRNQ  246 (258)
Q Consensus       187 ~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------------i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~  246 (258)
                      ...+.+..++..||.|+|+....|.-+-                  +.||+..+......  ....-+..|.|||.....
T Consensus       286 ~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~  365 (1351)
T KOG1035|consen  286 ETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKEN  365 (1351)
T ss_pred             HHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccc
Confidence            9999999999999999999866555441                  22555544332222  233344567788887765


Q ss_pred             CCCcc
Q psy12228        247 KVSVL  251 (258)
Q Consensus       247 ~~s~~  251 (258)
                      .++.+
T Consensus       366 ~~~~~  370 (1351)
T KOG1035|consen  366 TAKKS  370 (1351)
T ss_pred             cchhh
Confidence            55433

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=93.91  E-value=0.31  Score=39.42  Aligned_cols=76  Identities=17%  Similarity=0.211  Sum_probs=46.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .|..|-...+|+....+    ..+..+++|+.... ... .-...+|+.++..++.+.-.+++++.+. +   .++|||+
T Consensus         5 ~l~gG~tN~~~~v~~~~----~~~~~~vlR~~~~~-~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~---~~l~e~i   74 (235)
T cd05157           5 RFTGGITNKLVKVSNKE----DNQDAVLVRVYGNK-TEL-IIDRERELRIHKLLSKHGLAPKLYATFQ-N---GLIYEFI   74 (235)
T ss_pred             EcCCcccceEEEEEcCC----CCCCeEEEEEccCC-ccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC-C---cEEEEee
Confidence            45567777999886530    02467889977543 211 1123468888888844444455555432 2   3799999


Q ss_pred             CCCCHH
Q psy12228        153 PHGNLR  158 (258)
Q Consensus       153 ~~g~L~  158 (258)
                      +|-++.
T Consensus        75 ~G~~l~   80 (235)
T cd05157          75 PGRTLE   80 (235)
T ss_pred             CCCcCC
Confidence            985543

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=93.14  E-value=0.031  Score=52.87  Aligned_cols=42  Identities=14%  Similarity=-0.020  Sum_probs=32.4

Q ss_pred             cccCCCcceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        214 RFIGFDLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       214 Ki~dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.|||.++.....     ....+||+.|+|||++.+..++.++||.
T Consensus       518 ~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~Diw  564 (669)
T cd05610         518 IGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWW  564 (669)
T ss_pred             ccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHH
Confidence            45678877654332     2456899999999999999999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1033|consensus

Probab=92.01  E-value=0.038  Score=49.39  Aligned_cols=67  Identities=15%  Similarity=0.146  Sum_probs=54.9

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD  142 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~  142 (258)
                      ....+|.|+||.|+.+...     .++..+|||.|..........+.++|...+..+ .|++|+.+...+...
T Consensus        53 ~~~~~~~~g~~~~~~~~n~-----~d~~~~avkritlkn~e~s~~rvl~~~~s~a~f-eh~g~~~~~ha~~~~  119 (516)
T KOG1033|consen   53 PGQCLGRGGFGVVFSAQNK-----ADENKYAVKRITLKNREESRSRVLREVSSLAEF-EHPGIKRYFHAWYER  119 (516)
T ss_pred             ccccccccCccccCCcccc-----ccchhhHHHHhcccchhhhhhhhhccccchhhh-cccchhhheeceecC
Confidence            3447999999999998876     456689999997665666677889999999999 999999988777643

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=91.75  E-value=1.7  Score=38.60  Aligned_cols=150  Identities=5%  Similarity=-0.108  Sum_probs=86.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeE----E--c-CCc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVC----T--Q-DGP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~----~--~-~~~  144 (258)
                      ..||+|+-+.+|...--        ...+.|+....... ...+   -+..|.....||-+-.-+.+=    .  + ...
T Consensus        17 r~LgqGgea~ly~l~e~--------~d~VAKIYh~Pppa-~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~   84 (637)
T COG4248          17 RPLGQGGEADLYTLGEV--------RDQVAKIYHAPPPA-AQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKV   84 (637)
T ss_pred             ccccCCccceeeecchh--------hchhheeecCCCch-HHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence            36899999999864332        22344777653222 2122   233455554666443311111    1  1 123


Q ss_pred             EEEEEEeCCCC-CHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCccc-----cCC
Q psy12228        145 LYVIVEFAPHG-NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRF-----IGF  218 (258)
Q Consensus       145 ~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlKi-----~df  218 (258)
                      +-++|..+++- .+..++.....           -+.-....|.-++..++.++.+.+-||..|-+-+|+.-     +|=
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tR-----------Rqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~  153 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATR-----------RQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDD  153 (637)
T ss_pred             eEEecccCCCccchhhhcCchhh-----------cccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecC
Confidence            66778777653 23333322111           01113378999999999999999999999999999963     333


Q ss_pred             CcceeeeccC----------Cccccccccccccccc
Q psy12228        219 DLCILVFFHD----------STLLKTTSTIASLILR  244 (258)
Q Consensus       219 gl~~~~~~~~----------~~~~gt~~y~aPE~~~  244 (258)
                      +..+.....+          ...+|.+.|.+||.-.
T Consensus       154 ~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~  189 (637)
T COG4248         154 SKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQT  189 (637)
T ss_pred             ceEEEEcccceeeccCCceEecccCccccCCHHHhc
Confidence            3333322221          2457788999999854

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=90.53  E-value=1.1  Score=36.27  Aligned_cols=99  Identities=11%  Similarity=0.062  Sum_probs=60.7

Q ss_pred             eeeecCce-EEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCC--cccceeeeEEcC---CcEE
Q psy12228         73 VKIKCAFG-KVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHI--NIINLLGVCTQD---GPLY  146 (258)
Q Consensus        73 ~ig~G~fg-~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~--nIv~l~~~~~~~---~~~~  146 (258)
                      .|+.|+.. .||+..          ..+++|..+..   .....+.+|.+++..+..+-  .+.++++.....   +..+
T Consensus         4 ~~~~gG~~n~vy~~~----------~~~VlR~~~~~---~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~   70 (235)
T cd05155           4 PVDSGGTDNATFRLG----------DDMSVRLPSAA---GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPW   70 (235)
T ss_pred             eccCCCcccceEEcC----------CceEEEcCCcc---chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcce
Confidence            35555555 588641          24677876542   12346889999999884331  344445444332   2347


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      ++|++++|.++.+..                      +.  ....++.++++.|.-||+...
T Consensus        71 ~l~~~i~G~~l~~~~----------------------~~--~~~~l~~~la~~l~~LH~i~~  108 (235)
T cd05155          71 SVYRWLEGETATAAA----------------------LS--DPSEFAEDLADFLAALRQIDP  108 (235)
T ss_pred             EEEEeecCCCCCccc----------------------cC--CHHHHHHHHHHHHHHHhCCCc
Confidence            899999997775321                      11  123578889999999998643

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=90.25  E-value=1.1  Score=37.75  Aligned_cols=104  Identities=16%  Similarity=0.077  Sum_probs=61.6

Q ss_pred             eeecCceEEEEEEEccc-ccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         74 KIKCAFGKVICAEANGI-LKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~-~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +..|-...+|+....+. .....+..+++|+.....  ....+..+|..++..+..+--..++++++. +   .+|+||+
T Consensus         6 l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~--~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~e~i   79 (302)
T cd05156           6 ISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV--ELLIDRERELVVFARLSERNLGPKLYGIFP-N---GRIEEFI   79 (302)
T ss_pred             ecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC--cceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cchhhee
Confidence            44555668888775310 001235789999976532  122345688888888844433345666553 2   3578888


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      +|..+....                      +.   -..++.++++.|..||+...
T Consensus        80 ~G~~l~~~~----------------------~~---~~~~~~~ia~~L~~lH~~~~  110 (302)
T cd05156          80 PSRTLTTEE----------------------LR---DPDISAEIARRMAKLHSIVV  110 (302)
T ss_pred             CCCcCCHhH----------------------cC---CcHHHHHHHHHHHHhhCCCC
Confidence            876554321                      11   02356788999999998754

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=90.09  E-value=4  Score=34.46  Aligned_cols=72  Identities=15%  Similarity=0.132  Sum_probs=45.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhc--CCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG--QHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .|+.|....+|....       ++..+-||+-..    .....|..|++-|+.|.  .--.+++++++....+..+|+||
T Consensus        24 ~v~GG~i~~a~~~~~-------~~~~~FvK~~~~----~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle   92 (288)
T PF03881_consen   24 PVSGGDINEAYRLDT-------DGGSYFVKVNSE----SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLE   92 (288)
T ss_dssp             EE--SSSSEEEEEET-------TS-EEEEEEEEG----GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE
T ss_pred             ecCCCChhheEEEEC-------CCccEEEEecCh----hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEE
Confidence            677888899998763       457888898762    22346888998888883  34567788998887777799999


Q ss_pred             eCCCC
Q psy12228        151 FAPHG  155 (258)
Q Consensus       151 ~~~~g  155 (258)
                      |++.+
T Consensus        93 ~l~~~   97 (288)
T PF03881_consen   93 FLEMG   97 (288)
T ss_dssp             -----
T ss_pred             eecCC
Confidence            99874

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=89.85  E-value=1.3  Score=36.44  Aligned_cols=98  Identities=10%  Similarity=-0.001  Sum_probs=57.7

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeCC
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAP  153 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~  153 (258)
                      +..|-.+.+|+...       .+..+++|........-. -+..+|..+++.+..+.-..++++...    -++||||++
T Consensus         4 ~~~G~tn~~y~~~~-------~~~~~vlR~~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~   71 (256)
T TIGR02721         4 LSGGLTNRSWRIEH-------PGISFVWRPQSPVCKALG-VDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLE   71 (256)
T ss_pred             CCCcCcCCeEEEEe-------CCccEEEeeCCccccccc-CcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEecc
Confidence            34577778887763       236788887654311110 135678889988844322344554432    268999999


Q ss_pred             CCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        154 HGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       154 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      |..+..-    ..                 ..    ...+.++++.|.-||+...
T Consensus        72 G~~~~~~----~~-----------------~~----~~~~~~la~~l~~lH~~~~  101 (256)
T TIGR02721        72 GEVITLD----QF-----------------VA----LDLLLELAALLHQLHSQPR  101 (256)
T ss_pred             Ccccccc----cc-----------------cC----chhHHHHHHHHHHHhCCCC
Confidence            8554321    00                 11    1245778888888888754

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PLN02756 S-methyl-5-thioribose kinase

Probab=88.65  E-value=4.9  Score=35.72  Aligned_cols=103  Identities=8%  Similarity=-0.088  Sum_probs=63.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---Ch---HHHHHHHHHHHHHHHhcCC--CcccceeeeEEcCCc
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---SD---AEMMDLVSEMEMMKMIGQH--INIINLLGVCTQDGP  144 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~---~~~~~~~~E~~~l~~l~~h--~nIv~l~~~~~~~~~  144 (258)
                      .||.|....||+....       +..++||.-....   +.   ....+-..|++.|+.++..  .++.+++.++.+  .
T Consensus        39 eiggGn~N~VyrV~~~-------~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~  109 (418)
T PLN02756         39 EVGDGNLNFVYIVVSS-------SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--M  109 (418)
T ss_pred             EcCCCceeeEEEEEcC-------CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--C
Confidence            6788999999997653       2458888875211   11   1234445567777766322  478888888863  4


Q ss_pred             EEEEEEeCCC--CCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy12228        145 LYVIVEFAPH--GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHY  202 (258)
Q Consensus       145 ~~lv~e~~~~--g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y  202 (258)
                      -+++||++++  ..+++.|....                  ........+...++..|-|
T Consensus       110 ~vlvME~L~~~~~ilr~~Ll~G~------------------~~p~~a~~ig~~la~tLf~  151 (418)
T PLN02756        110 ALIGMRYLEPPHIILRKGLIAGI------------------EYPLLAEHMSDYMAKTLFF  151 (418)
T ss_pred             CEEEEeecCCcceehhhhhccCC------------------CCHHHHHHHHHHHHHHHhh
Confidence            5789999977  34555554432                  2245555666666666543

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=88.55  E-value=4.2  Score=35.53  Aligned_cols=85  Identities=12%  Similarity=-0.071  Sum_probs=53.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCC------CChHHHHHHHHHHHHHHHhcCC-C-cccceeeeEEcCCc
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG------HSDAEMMDLVSEMEMMKMIGQH-I-NIINLLGVCTQDGP  144 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~~~E~~~l~~l~~h-~-nIv~l~~~~~~~~~  144 (258)
                      .||.|....||++...     ..+..|+||.-..-      .-.-..++...|.+.|+..+.. | .++++|.+  +++.
T Consensus         2 EigdGnlN~VfrV~~~-----~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~   74 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQ-----EGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEM   74 (370)
T ss_pred             cCCCCceEEEEEEEcC-----CCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--cccc
Confidence            4788999999999864     22357899876321      1122345566788888776433 3 34455544  4556


Q ss_pred             EEEEEEeCCC-CCHHHHHhhc
Q psy12228        145 LYVIVEFAPH-GNLRDFLRKH  164 (258)
Q Consensus       145 ~~lv~e~~~~-g~L~~~l~~~  164 (258)
                      ..+|||+++. ..|++.|...
T Consensus        75 ~~~vMEdL~~~~ilR~~Li~g   95 (370)
T TIGR01767        75 AVTVMEDLSHHKIARKGLIEG   95 (370)
T ss_pred             ceehHhhCccchHHHHHHHcC
Confidence            6799999965 3566666554

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG2268|consensus

Probab=87.11  E-value=0.52  Score=40.47  Aligned_cols=112  Identities=11%  Similarity=-0.008  Sum_probs=69.2

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-------------------ChHH--HHHHHHHHHHHHHhc
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-------------------SDAE--MMDLVSEMEMMKMIG  127 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-------------------~~~~--~~~~~~E~~~l~~l~  127 (258)
                      +..+.||=|.-+.||.+...      .|.+.++|.-+...                   +.-.  +-...+|+..|+.|-
T Consensus        95 svGnqIGVGKESDIY~v~d~------~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~  168 (465)
T KOG2268|consen   95 SVGNQIGVGKESDIYVVADE------EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALY  168 (465)
T ss_pred             hhccccccccccceEEEecC------CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHH
Confidence            55678999999999999875      56777777642211                   1111  123567888888884


Q ss_pred             CCCc-ccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC
Q psy12228        128 QHIN-IINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR  206 (258)
Q Consensus       128 ~h~n-Iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~  206 (258)
                      .|-. +.+.+++    +..++|||++.+-.|.+.-+-                    .+...   +...+..-+--|..+
T Consensus       169 e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v--------------------~d~~~---ly~~lm~~Iv~la~~  221 (465)
T KOG2268|consen  169 ERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRHV--------------------EDPPT---LYDDLMGLIVRLANH  221 (465)
T ss_pred             HcCCCCCCcccc----cceeeHHHhhcccceeeeeec--------------------CChHH---HHHHHHHHHHHHHHc
Confidence            4432 3333433    457899999988666543211                    22233   333334445567789


Q ss_pred             CccccCc
Q psy12228        207 KVGNDAV  213 (258)
Q Consensus       207 ~iiH~Dl  213 (258)
                      |+||+|.
T Consensus       222 GlIHgDF  228 (465)
T KOG2268|consen  222 GLIHGDF  228 (465)
T ss_pred             Cceeccc
Confidence            9999997

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=82.04  E-value=9.2  Score=31.97  Aligned_cols=74  Identities=9%  Similarity=0.047  Sum_probs=45.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCC-cccceeee------EEcCCcE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHI-NIINLLGV------CTQDGPL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~-nIv~l~~~------~~~~~~~  145 (258)
                      .|..|....+|+....       +..+++|+.... +   ......|+.++..+.++- .+.+++..      ...++..
T Consensus        21 ~i~~G~~n~~y~v~~~-------~~~~vLr~~~~~-~---~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~   89 (296)
T cd05153          21 GISAGIENTNYFVTTD-------SGRYVLTLFEKV-S---AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP   89 (296)
T ss_pred             cccCccccceEEEEeC-------CCcEEEEEcCCC-C---hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence            4556777789987643       246888988641 2   234667777777773221 24444432      1234467


Q ss_pred             EEEEEeCCCCCH
Q psy12228        146 YVIVEFAPHGNL  157 (258)
Q Consensus       146 ~lv~e~~~~g~L  157 (258)
                      +++++|++|..+
T Consensus        90 ~~l~~~i~G~~~  101 (296)
T cd05153          90 AALVEFLAGEHL  101 (296)
T ss_pred             EEEEEeCCCCCC
Confidence            899999998554

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG1236|consensus

Probab=81.64  E-value=4.9  Score=35.84  Aligned_cols=54  Identities=9%  Similarity=0.008  Sum_probs=35.8

Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCccccCcccc
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYL-QSRKVGNDAVRFI  216 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yL-H~~~iiH~DlKi~  216 (258)
                      ..|+-+|..+-++..+++...                  .++.-...++.-.+.|+.-+ --.+++|.|+-+.
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~~~------------------~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPG  374 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKWKS------------------QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPG  374 (565)
T ss_pred             ceeeeeccccccHHhhhhccc------------------ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCC
Confidence            456667888888888887654                  45555566665555555433 3458999999543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	258
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-35
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-35
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-35
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		2e-35
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		2e-35
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		2e-35
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-35
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-35
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		8e-35
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		2e-34
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-34
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-34
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-34
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-34
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		7e-34
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-33
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-33
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		1e-33
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-33
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-33
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-33
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-33
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		3e-25
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		5e-24
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		5e-24
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		6e-24
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		6e-24
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		8e-24
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		8e-24
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		1e-23
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-23
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-23
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-23
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		2e-23
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-23
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-23
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-23
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		9e-23
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		9e-23
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-22
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		5e-22
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		7e-22
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-21
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		4e-21
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		4e-21
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		6e-21
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		3e-20
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		3e-20
1fvr_A	327	Tie2 Kinase Domain Length = 327		3e-20
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		1e-19
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		1e-19
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		1e-19
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		1e-19
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		1e-19
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-19
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-19
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		3e-19
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-19
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		5e-15
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		5e-15
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		7e-15
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-13
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		4e-13
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		8e-12
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		8e-12
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		8e-12
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		8e-12
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		8e-12
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-12
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		9e-12
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		9e-12
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		1e-11
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-11
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		1e-11
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-11
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-11
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-11
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-11
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-11
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-11
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		3e-11
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		3e-11
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-11
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-11
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-11
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		4e-11
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		4e-11
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		4e-11
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		4e-11
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		5e-11
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		5e-11
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-11
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		5e-11
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		5e-11
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		5e-11
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		5e-11
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		5e-11
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		5e-11
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		5e-11
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		5e-11
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		5e-11
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-11
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		5e-11
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		5e-11
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		6e-11
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		6e-11
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-11
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		7e-11
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-10
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-10
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		7e-10
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		2e-09
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		3e-09
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		4e-09
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		7e-09
3a4o_X	286	Lyn Kinase Domain Length = 286		8e-09
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		1e-08
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		1e-08
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-08
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-08
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-08
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		2e-08
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-08
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-08
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-08
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-08
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-08
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-08
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-08
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		2e-08
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-08
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		2e-08
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-08
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-08
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		2e-08
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-08
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-08
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		2e-08
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		2e-08
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		2e-08
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-08
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		3e-08
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-08
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-08
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		3e-08
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		3e-08
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		3e-08
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		3e-08
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-08
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		3e-08
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-08
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-08
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		4e-08
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-08
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-08
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-08
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		4e-08
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		4e-08
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		5e-08
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		5e-08
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		5e-08
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		5e-08
2pl0_A	289	Lck Bound To Imatinib Length = 289		5e-08
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		5e-08
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-08
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		5e-08
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-08
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		5e-08
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		5e-08
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-08
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		5e-08
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		5e-08
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		5e-08
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		5e-08
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		5e-08
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		5e-08
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		5e-08
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		5e-08
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		5e-08
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-08
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		6e-08
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		6e-08
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		6e-08
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		6e-08
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		6e-08
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-08
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		7e-08
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		7e-08
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		7e-08
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		8e-08
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		8e-08
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		8e-08
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		8e-08
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		8e-08
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		8e-08
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		9e-08
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		9e-08
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-07
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-07
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		1e-07
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-07
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-07
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-07
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		1e-07
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-07
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-07
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-07
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		3e-07
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		4e-07
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		5e-07
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		5e-07
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		6e-07
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		1e-06
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-06
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		1e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		1e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-06
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-06
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		1e-06
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-06
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-06
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-06
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-06
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-06
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-06
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-06
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		2e-06
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-06
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		2e-06
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-06
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-06
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-06
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		2e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-06
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-06
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-06
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-06
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-06
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-06
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-06
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-06
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-06
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-06
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-06
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		5e-06
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		5e-06
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		6e-06
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-06
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-06
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		8e-06
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		8e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-05
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		1e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-05
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		1e-05
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		1e-05
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-05
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-05
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		1e-05
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		1e-05
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		1e-05
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-05
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-05
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		2e-05
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		2e-05
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-05
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		2e-05
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		2e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-05
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		2e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-05
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		2e-05
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-05
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		2e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-05
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		2e-05
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-05
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		2e-05
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		2e-05
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-05
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-05
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		2e-05
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		2e-05
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		2e-05
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		2e-05
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-05
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		2e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		3e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		3e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		3e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-05
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		4e-05
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		6e-05
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		2e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		6e-04
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		6e-04
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		7e-04
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		9e-04

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 40  AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 99
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 100 LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEFSFNPSHNPEEQLSSKDLVSCAYQ 158
Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 159 VARGMEYLASKK 170

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 33  AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 92
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 93  LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYSYNPSHNPEEQLSSKDLVSCAYQ 151
Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 152 VARGMEYLASKK 163

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 29  AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 88
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 89  LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYSYNPSHNPEEQLSSKDLVSCAYQ 147
Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 148 VARGMEYLASKK 159

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 32  AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 91
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 92  LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYSYNPSHNPEEQLSSKDLVSCAYQ 150
Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 151 VARGMEYLASKK 162

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 40  AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 99
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 100 LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYSYNPSHNPEEQLSSKDLVSCAYQ 158
Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 159 VARGMEYLASKK 170

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 81  AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 140
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 141 LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYSYNPSHNPEEQLSSKDLVSCAYQ 199
Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 200 VARGMEYLASKK 211

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 25  AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 84
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 85  LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYCYNPSHNPEEQLSSKDLVSCAYQ 143
Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 144 VARGMEYLASKK 155

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 40  AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 99
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 100 LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYCYNPSHNPEEQLSSKDLVSCAYQ 158
Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 159 VARGMEYLASKK 170

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score =  143 bits (361), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 74/132 (56%), Positives = 93/132 (70%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 40  AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 99
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+   P  G E     ++     L+ KDL+S AYQ
Sbjct: 100 LGACTQDGPLYVIVEYASKGNLREYLQAREP-PGLEYSYNPSHNPEEQLSSKDLVSCAYQ 158
Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 159 VARGMEYLASKK 170

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 47  AFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 106
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEXSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 166 LARGMEYLASQK 177

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score =  141 bits (356), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 47  AFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 106
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 166 LARGMEYLASQK 177

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score =  141 bits (356), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 47  AFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 106
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 166 LARGMEYLASQK 177

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score =  141 bits (355), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 47  AFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINL 106
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 166 LARGMEYLASQK 177

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score =  141 bits (355), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 47  AFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 106
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 166 LARGMEYLASQK 177

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score =  140 bits (353), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/131 (57%), Positives = 90/131 (68%), Gaps = 3/131 (2%)
Query: 79  FGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINLL
Sbjct: 94  FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 153
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ+
Sbjct: 154 GACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQL 212
Query: 197 ANGMHYLQSRK 207
           A GM YL S+K
Sbjct: 213 ARGMEYLASQK 223

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score =  139 bits (351), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/131 (57%), Positives = 90/131 (68%), Gaps = 3/131 (2%)
Query: 79  FGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINLL
Sbjct: 40  FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 99
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ+
Sbjct: 100 GACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQL 158
Query: 197 ANGMHYLQSRK 207
           A GM YL S+K
Sbjct: 159 ARGMEYLASQK 169

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score =  139 bits (351), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            FG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 34  CFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 93
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 94  LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 152
Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 153 LARGMEYLASQK 164

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/131 (57%), Positives = 90/131 (68%), Gaps = 3/131 (2%)
Query: 79  FGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINLL
Sbjct: 37  FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 96
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ+
Sbjct: 97  GACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQL 155
Query: 197 ANGMHYLQSRK 207
           A GM YL S+K
Sbjct: 156 ARGMEYLASQK 166

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NII L
Sbjct: 47  AFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITL 106
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 166 LARGMEYLASQK 177

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NII+L
Sbjct: 47  AFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHL 106
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 166 LARGMEYLASQK 177

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 47  AFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 106
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIV +A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 107 LGACTQDGPLYVIVAYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 166 LARGMEYLASQK 177

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score =  138 bits (347), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 78  AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 47  AFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 106
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIV +A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 107 LGACTQDGPLYVIVGYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 166 LARGMEYLASQK 177

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 83/133 (62%), Gaps = 6/133 (4%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A GI K G+   VAVKMLKE    +E   L+SE++MM  +G H NI+NLLG
Sbjct: 57  AFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLG 116
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSG-----YESPLG-SAYTNGNVLTEKDLIS 191
            CT  GP+Y+I E+  +G+L ++LR  R         YE+        + NVLT +DL+ 
Sbjct: 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLC 176
Query: 192 FAYQVANGMHYLQ 204
           FAYQVA GM +L+
Sbjct: 177 FAYQVAKGMEFLE 189

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKE-GHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           AFGKV+ A A G+ K+  +  VAVKMLK   H+D E   L+SE+++M  +GQH NI+NLL
Sbjct: 58  AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLL 116
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CT  GP+ VI E+  +G+L +FLR+ RP  G E     ++     L+ +DL+ F+ QV
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKRP-PGLEYSYNPSHNPEEQLSSRDLLHFSSQV 175
Query: 197 ANGMHYLQSR 206
           A GM +L S+
Sbjct: 176 AQGMAFLASK 185

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 6/133 (4%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           + AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NL
Sbjct: 37  RGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 136 LGVCTQD-GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           LG CT+  GPL VIVEF   GNL  +LR  R       P    Y   + LT + LI +++
Sbjct: 97  LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF---VPYKDLYK--DFLTLEHLIXYSF 151
Query: 195 QVANGMHYLQSRK 207
           QVA GM +L SRK
Sbjct: 152 QVAKGMEFLASRK 164

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 86/133 (64%), Gaps = 5/133 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 40  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 99
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHRPS-SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT+  GPL VIVEF   GNL  +LR  R     Y++P    Y   + LT + LI +++Q
Sbjct: 100 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP-EDLYK--DFLTLEHLICYSFQ 156
Query: 196 VANGMHYLQSRKV 208
           VA GM +L SRK 
Sbjct: 157 VAKGMEFLASRKC 169

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 6/133 (4%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           + AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NL
Sbjct: 37  RGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 136 LGVCTQD-GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           LG CT+  GPL VIVEF   GNL  +LR  R       P    Y   + LT + LI +++
Sbjct: 97  LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF---VPYKDLYK--DFLTLEHLICYSF 151
Query: 195 QVANGMHYLQSRK 207
           QVA GM +L SRK
Sbjct: 152 QVAKGMEFLASRK 164

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 41  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 100
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHRPS-SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT+  GPL VIVEF   GNL  +LR  R     Y+      Y   + LT + LI +++Q
Sbjct: 101 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK--DFLTLEHLICYSFQ 158
Query: 196 VANGMHYLQSRKV 208
           VA GM +L SRK 
Sbjct: 159 VAKGMEFLASRKC 171

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           + AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NL
Sbjct: 39  RGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 98
Query: 136 LGVCTQD-GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           LG CT+  GPL VIVEF   GNL  +LR  R       P        + LT + LI +++
Sbjct: 99  LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF---VPYKPEDLYKDFLTLEHLIXYSF 155
Query: 195 QVANGMHYLQSRK 207
           QVA GM +L SRK
Sbjct: 156 QVAKGMEFLASRK 168

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 39  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHRPS-SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT+  GPL VIVEF   GNL  +LR  R     Y+      Y   + LT + LI +++Q
Sbjct: 99  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTLEHLICYSFQ 156
Query: 196 VANGMHYLQSRKV 208
           VA GM +L SRK 
Sbjct: 157 VAKGMEFLASRKC 169

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 30  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 89
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHRPS-SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT+  GPL VIVEF   GNL  +LR  R     Y+      Y   + LT + LI +++Q
Sbjct: 90  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTLEHLICYSFQ 147
Query: 196 VANGMHYLQSRKV 208
           VA GM +L SRK 
Sbjct: 148 VAKGMEFLASRKC 160

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 39  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHRPS-SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT+  GPL VIVEF   GNL  +LR  R     Y+      Y   + LT + LI +++Q
Sbjct: 99  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTLEHLICYSFQ 156
Query: 196 VANGMHYLQSRKV 208
           VA GM +L SRK 
Sbjct: 157 VAKGMEFLASRKC 169

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 39  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHRPS-SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT+  GPL VIVEF   GNL  +LR  R     Y+      Y   + LT + LI +++Q
Sbjct: 99  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTLEHLICYSFQ 156
Query: 196 VANGMHYLQSRKV 208
           VA GM +L SRK 
Sbjct: 157 VAKGMEFLASRKC 169

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 76  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHRPS-SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT+  GPL VIVEF   GNL  +LR  R     Y+      Y   + LT + LI +++Q
Sbjct: 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTLEHLICYSFQ 193
Query: 196 VANGMHYLQSRKV 208
           VA GM +L SRK 
Sbjct: 194 VAKGMEFLASRKC 206

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 30  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 89
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHRPS-SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT+  GPL VI EF   GNL  +LR  R     Y+      Y   + LT + LI +++Q
Sbjct: 90  ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTLEHLICYSFQ 147
Query: 196 VANGMHYLQSRKV 208
           VA GM +L SRK 
Sbjct: 148 VAKGMEFLASRKC 160

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 30  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 89
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHRPS-SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT+  GPL VI EF   GNL  +LR  R     Y+      Y   + LT + LI +++Q
Sbjct: 90  ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTLEHLICYSFQ 147
Query: 196 VANGMHYLQSRKV 208
           VA GM +L SRK 
Sbjct: 148 VAKGMEFLASRKC 160

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 30  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 89
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHRPS-SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT+  GPL VI EF   GNL  +LR  R     Y+      Y   + LT + LI +++Q
Sbjct: 90  ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTLEHLICYSFQ 147
Query: 196 VANGMHYLQSRKV 208
           VA GM +L SRK 
Sbjct: 148 VAKGMEFLASRKC 160

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score =  103 bits (257), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 85/137 (62%), Gaps = 8/137 (5%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FGKV+ A A  +  +   TTVAVKMLKE  S +E+ DL+SE  ++K +  H ++I L G 
Sbjct: 36  FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGA 94
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRP-SSGYESPLGSA------YTNGNVLTEKDLIS 191
           C+QDGPL +IVE+A +G+LR FLR+ R    GY    GS       + +   LT  DLIS
Sbjct: 95  CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLIS 154
Query: 192 FAYQVANGMHYLQSRKV 208
           FA+Q++ GM YL   K+
Sbjct: 155 FAWQISQGMQYLAEMKL 171

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score =  103 bits (257), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 85/137 (62%), Gaps = 8/137 (5%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FGKV+ A A  +  +   TTVAVKMLKE  S +E+ DL+SE  ++K +  H ++I L G 
Sbjct: 36  FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGA 94
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRP-SSGYESPLGSA------YTNGNVLTEKDLIS 191
           C+QDGPL +IVE+A +G+LR FLR+ R    GY    GS       + +   LT  DLIS
Sbjct: 95  CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLIS 154
Query: 192 FAYQVANGMHYLQSRKV 208
           FA+Q++ GM YL   K+
Sbjct: 155 FAWQISQGMQYLAEMKL 171

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 83/132 (62%), Gaps = 8/132 (6%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FGKV+ A A  +  +   TTVAVKMLKE  S +E+ DL+SE  ++K +  H ++I L G 
Sbjct: 36  FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGA 94
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRP-SSGYESPLGSA------YTNGNVLTEKDLIS 191
           C+QDGPL +IVE+A +G+LR FLR+ R    GY    GS       + +   LT  DLIS
Sbjct: 95  CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLIS 154
Query: 192 FAYQVANGMHYL 203
           FA+Q++ GM YL
Sbjct: 155 FAWQISQGMQYL 166

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 85/136 (62%), Gaps = 8/136 (5%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKE-GHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           AFGKV+ A A G+ K+  +  VAVKMLK   H+D E   L+SE+++M  +GQH NI+NLL
Sbjct: 43  AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLL 101
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHR-----PS-SGYESPLGSAYTNGNVLTEKDLI 190
           G CT  GP+ VI E+  +G+L +FLR+       PS +  + P G    +G  L  +DL+
Sbjct: 102 GACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLL 161
Query: 191 SFAYQVANGMHYLQSR 206
            F+ QVA GM +L S+
Sbjct: 162 HFSSQVAQGMAFLASK 177

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 5/130 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKE-GHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           AFGKV+ A A G+ K+  +  VAVKMLK   H+D E   L+SE+++M  +GQH NI+NLL
Sbjct: 58  AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLL 116
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CT  GP+ VI E+  +G+L +FLR  R S   E+    A  N + L+ +DL+ F+ QV
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLR--RKSRVLETDPAFAIAN-STLSTRDLLHFSSQV 173
Query: 197 ANGMHYLQSR 206
           A GM +L S+
Sbjct: 174 AQGMAFLASK 183

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 5/130 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKE-GHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           AFGKV+ A A G+ K+  +  VAVKMLK   H+D E   L+SE+++M  +GQH NI+NLL
Sbjct: 58  AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLL 116
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CT  GP+ VI E+  +G+L +FLR  R S   E+    A  N    T +DL+ F+ QV
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLR--RKSRVLETDPAFAIANSTAST-RDLLHFSSQV 173
Query: 197 ANGMHYLQSR 206
           A GM +L S+
Sbjct: 174 AQGMAFLASK 183

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKE-GHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           AFGKV+ A A G+ K+  +  VAVKMLK   H+D E   L+SE+++M  +GQH NI+NLL
Sbjct: 50  AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLL 108
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CT  GP+ VI E+  +G+L +FLR+       E+ L     +G  L  +DL+ F+ QV
Sbjct: 109 GACTHGGPVLVITEYCCYGDLLNFLRRKA-----EADLDK--EDGRPLELRDLLHFSSQV 161
Query: 197 ANGMHYLQSR 206
           A GM +L S+
Sbjct: 162 AQGMAFLASK 171

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKE-GHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           AFGKV+ A A G+ K+  +  VAVKMLK   H+D E   L+SE+++M  +GQH NI+NLL
Sbjct: 58  AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLL 116
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G CT  GP+ VI E+  +G+L +FLR+       E+ L     +G  L  +DL+ F+ QV
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKA-----EADLDK--EDGRPLELRDLLHFSSQV 169
Query: 197 ANGMHYLQSR 206
           A GM +L S+
Sbjct: 170 AQGMAFLASK 179

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 51/182 (28%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A GI K     TVAVKMLKEG + +E   L++E++++  IG H+N++NLLG
Sbjct: 39  AFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLG 98
Query: 138 VCT-QDGPLYVIVEFAPHGNLRDFLRKHR------------------------------- 165
            CT Q GPL VIVE+  +GNL ++L+  R                               
Sbjct: 99  ACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQGKKPR 158
Query: 166 ----------PSSGY---------ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
                      SSG+         E    S       +T +DLIS+++QVA GM +L SR
Sbjct: 159 LDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSR 218
Query: 207 KV 208
           K 
Sbjct: 219 KC 220

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V+ A    I K G+    A+K +KE  S  +  D   E+E++  +G H NIINLLG 
Sbjct: 35  FGQVLKAR---IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 91
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
           C   G LY+ +E+APHGNL DFLRK R     +     A +  + L+ + L+ FA  VA 
Sbjct: 92  CEHRGYLYLAIEYAPHGNLLDFLRKSRVLET-DPAFAIANSTASTLSSQQLLHFAADVAR 150
Query: 199 GMHYLQSRK 207
           GM YL  ++
Sbjct: 151 GMDYLSQKQ 159

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V+ A    I K G+    A+K +KE  S  +  D   E+E++  +G H NIINLLG 
Sbjct: 28  FGQVLKAR---IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 84
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
           C   G LY+ +E+APHGNL DFLRK R     +     A +  + L+ + L+ FA  VA 
Sbjct: 85  CEHRGYLYLAIEYAPHGNLLDFLRKSRVLET-DPAFAIANSTASTLSSQQLLHFAADVAR 143
Query: 199 GMHYLQSRK 207
           GM YL  ++
Sbjct: 144 GMDYLSQKQ 152

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V+ A    I K G+    A+K +KE  S  +  D   E+E++  +G H NIINLLG 
Sbjct: 38  FGQVLKAR---IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 94
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
           C   G LY+ +E+APHGNL DFLRK R     +     A +  + L+ + L+ FA  VA 
Sbjct: 95  CEHRGYLYLAIEYAPHGNLLDFLRKSRVLET-DPAFAIANSTASTLSSQQLLHFAADVAR 153
Query: 199 GMHYLQSRK 207
           GM YL  ++
Sbjct: 154 GMDYLSQKQ 162

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A G++K     TVAVKMLK      E   L+SE++++  +G H+NI+NLLG
Sbjct: 35  AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 94
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPS--SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT  GP  VI E+  +G+L +FLR+ R S      SP      +   L  +DL+SF+YQ
Sbjct: 95  ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP-AIMEDDELALDLEDLLSFSYQ 153
Query: 196 VANGMHYLQSR 206
           VA GM +L S+
Sbjct: 154 VAKGMAFLASK 164

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A G++K     TVAVKMLK      E   L+SE++++  +G H+NI+NLLG
Sbjct: 53  AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 112
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPS--SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT  GP  VI E+  +G+L +FLR+ R S      SP      +   L  +DL+SF+YQ
Sbjct: 113 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP-AIMEDDELALDLEDLLSFSYQ 171
Query: 196 VANGMHYLQSR 206
           VA GM +L S+
Sbjct: 172 VAKGMAFLASK 182

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A G++K     TVAVKMLK      E   L+SE++++  +G H+NI+NLLG
Sbjct: 51  AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 110
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPS--SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT  GP  VI E+  +G+L +FLR+ R S      SP      +   L  +DL+SF+YQ
Sbjct: 111 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP-AIMEDDELALDLEDLLSFSYQ 169
Query: 196 VANGMHYLQSR 206
           VA GM +L S+
Sbjct: 170 VAKGMAFLASK 180

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A G++K     TVAVKMLK      E   L+SE++++  +G H+NI+NLLG
Sbjct: 58  AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 117
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPS--SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT  GP  VI E+  +G+L +FLR+ R S      SP      +   L  +DL+SF+YQ
Sbjct: 118 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP-AIMEDDELALDLEDLLSFSYQ 176
Query: 196 VANGMHYLQSR 206
           VA GM +L S+
Sbjct: 177 VAKGMAFLASK 187

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A G++K     TVAVKMLK      E   L+SE++++  +G H+NI+NLLG
Sbjct: 58  AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 117
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPS--SGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            CT  GP  VI E+  +G+L +FLR+ R S      SP      +   L  +DL+SF+YQ
Sbjct: 118 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP-AIMEDDELALDLEDLLSFSYQ 176
Query: 196 VANGMHYLQSR 206
           VA GM +L S+
Sbjct: 177 VAKGMAFLASK 187

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 85/181 (46%), Gaps = 50/181 (27%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 32  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 91
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHR------PSSGYESPLGSAYTNG--------- 181
            CT+  GPL VIVEF   GNL  +LR  R       + G     G  Y            
Sbjct: 92  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRL 151
Query: 182 ----------------------------------NVLTEKDLISFAYQVANGMHYLQSRK 207
                                             + LT + LI +++QVA GM +L SRK
Sbjct: 152 DSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 211
Query: 208 V 208
Sbjct: 212 C 212

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 85/181 (46%), Gaps = 50/181 (27%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 34  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 93
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHR------PSSGYESPLGSAYTNG--------- 181
            CT+  GPL VIVEF   GNL  +LR  R       + G     G  Y            
Sbjct: 94  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRL 153
Query: 182 ----------------------------------NVLTEKDLISFAYQVANGMHYLQSRK 207
                                             + LT + LI +++QVA GM +L SRK
Sbjct: 154 DSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 213
Query: 208 V 208
Sbjct: 214 C 214

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 85/181 (46%), Gaps = 50/181 (27%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 39  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHR------PSSGYESPLGSAYTNG--------- 181
            CT+  GPL VIVEF   GNL  +LR  R       + G     G  Y            
Sbjct: 99  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRL 158
Query: 182 ----------------------------------NVLTEKDLISFAYQVANGMHYLQSRK 207
                                             + LT + LI +++QVA GM +L SRK
Sbjct: 159 DSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 218
Query: 208 V 208
Sbjct: 219 C 219

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 85/181 (46%), Gaps = 50/181 (27%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 41  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 100
Query: 138 VCTQD-GPLYVIVEFAPHGNLRDFLRKHR------PSSGYESPLGSAYTNG--------- 181
            CT+  GPL VIVEF   GNL  +LR  R       + G     G  Y            
Sbjct: 101 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRL 160
Query: 182 ----------------------------------NVLTEKDLISFAYQVANGMHYLQSRK 207
                                             + LT + LI +++QVA GM +L SRK
Sbjct: 161 DSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 220
Query: 208 V 208
Sbjct: 221 C 221

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  AE + +L +     VAVK LKE  S++   D   E E++ M+ QH +I+   G
Sbjct: 30  AFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTML-QHQHIVRFFG 87
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCT+  PL ++ E+  HG+L  FLR H P +   +  G        L    L++ A QVA
Sbjct: 88  VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA--GGEDVAPGPLGLGQLLAVASQVA 145
Query: 198 NGMHYL 203
            GM YL
Sbjct: 146 AGMVYL 151

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  AE + +L +     VAVK LKE  S++   D   E E++ M+ QH +I+   G
Sbjct: 24  AFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTML-QHQHIVRFFG 81
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCT+  PL ++ E+  HG+L  FLR H P +   +  G        L    L++ A QVA
Sbjct: 82  VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA--GGEDVAPGPLGLGQLLAVASQVA 139
Query: 198 NGMHYL 203
            GM YL
Sbjct: 140 AGMVYL 145

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  AE + +L +     VAVK LKE  S++   D   E E++ M+ QH +I+   G
Sbjct: 53  AFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTML-QHQHIVRFFG 110
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCT+  PL ++ E+  HG+L  FLR H P +   +  G        L    L++ A QVA
Sbjct: 111 VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA--GGEDVAPGPLGLGQLLAVASQVA 168
Query: 198 NGMHYL 203
            GM YL
Sbjct: 169 AGMVYL 174

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 68  NSQEYVKI--KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKM 125
           N+ EYV+   + AFG+V  A A G+L     T VAVKMLKE  S     D   E  +M  
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 126 IGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV-- 183
              + NI+ LLGVC    P+ ++ E+  +G+L +FLR   P +          T   V  
Sbjct: 107 F-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 184 -----LTEKDLISFAYQVANGMHYLQSRK 207
                L+  + +  A QVA GM YL  RK
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSERK 194

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  AE   +  +     VAVK LK+  SD    D   E E++  + QH +I+   G
Sbjct: 25  AFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNL-QHEHIVKFYG 82
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VC +  PL ++ E+  HG+L  FLR H P    ++ L +       LT+  ++  A Q+A
Sbjct: 83  VCVEGDPLIMVFEYMKHGDLNKFLRAHGP----DAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 198 NGMHYLQSR 206
            GM YL S+
Sbjct: 139 AGMVYLASQ 147

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A  I+K    T VAVK + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 29  SFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLG 87
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V ++  P  V++E   HG+L+ +LR  RP +  E+  G         T +++I  A ++A
Sbjct: 88  VVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPPP-----TLQEMIQMAAEIA 140
Query: 198 NGMHYLQSRK 207
           +GM YL ++K
Sbjct: 141 DGMAYLNAKK 150

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A  I+K    T VAVK + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 29  SFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLG 87
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V ++  P  V++E   HG+L+ +LR  RP +  E+  G         T +++I  A ++A
Sbjct: 88  VVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPPP-----TLQEMIQMAAEIA 140
Query: 198 NGMHYLQSRK 207
           +GM YL ++K
Sbjct: 141 DGMAYLNAKK 150

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A  I+K    T VAVK + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 29  SFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLG 87
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V ++  P  V++E   HG+L+ +LR  RP +  E+  G         T +++I  A ++A
Sbjct: 88  VVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPPP-----TLQEMIQMAAEIA 140
Query: 198 NGMHYLQSRK 207
           +GM YL ++K
Sbjct: 141 DGMAYLNAKK 150

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A  I+K    T VAVK + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 29  SFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLG 87
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V ++  P  V++E   HG+L+ +LR  RP +  E+  G         T +++I  A ++A
Sbjct: 88  VVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPPP-----TLQEMIQMAAEIA 140
Query: 198 NGMHYLQSRK 207
           +GM YL ++K
Sbjct: 141 DGMAYLNAKK 150

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT + P Y++ E+ P+GNL
Sbjct: 59  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTLEPPFYIVTEYMPYGNL 115
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +T   L+  A Q+++ M YL+ +
Sbjct: 116 LDYLRE---------------CNREEVTAVVLLYMATQISSAMEYLEKK 149

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A  I+K    T VAVK + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 29  SFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLG 87
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V ++  P  V++E   HG+L+ +LR  RP +  E+  G         T +++I  A ++A
Sbjct: 88  VVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPPP-----TLQEMIQMAAEIA 140
Query: 198 NGMHYLQSRK 207
           +GM YL ++K
Sbjct: 141 DGMAYLNAKK 150

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A  I+K    T VAVK + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 26  SFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLG 84
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V ++  P  V++E   HG+L+ +LR  RP +  E+  G         T +++I  A ++A
Sbjct: 85  VVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPPP-----TLQEMIQMAAEIA 137
Query: 198 NGMHYLQSRK 207
           +GM YL ++K
Sbjct: 138 DGMAYLNAKK 147

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A  I+K    T VAVK + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 30  SFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLG 88
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V ++  P  V++E   HG+L+ +LR  RP +  E+  G         T +++I  A ++A
Sbjct: 89  VVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPPP-----TLQEMIQMAAEIA 141
Query: 198 NGMHYLQSRK 207
           +GM YL ++K
Sbjct: 142 DGMAYLNAKK 151

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 37  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 95
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP          A  N  VL    L   I  A 
Sbjct: 96  VVSQGQPTLVIMELMTRGDLKSYLRSLRP----------AMANNPVLAPPSLSKMIQMAG 145
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 146 EIADGMAYLNANK 158

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A  I+K    T VAVK + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 28  SFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLG 86
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V ++  P  V++E   HG+L+ +LR  RP +  E+  G         T +++I  A ++A
Sbjct: 87  VVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPPP-----TLQEMIQMAAEIA 139
Query: 198 NGMHYLQSRK 207
           +GM YL ++K
Sbjct: 140 DGMAYLNAKK 149

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 27  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 85
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP          A  N  VL    L   I  A 
Sbjct: 86  VVSQGQPTLVIMELMTRGDLKSYLRSLRP----------AMANNPVLAPPSLSKMIQMAG 135
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 136 EIADGMAYLNANK 148

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I+EF  +GNL
Sbjct: 38  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNL 94
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   ++   L+  A Q+++ M YL+ +
Sbjct: 95  LDYLRE---------------CNRQEVSAVVLLYMATQISSAMEYLEKK 128

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I+EF  +GNL
Sbjct: 40  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNL 96
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   ++   L+  A Q+++ M YL+ +
Sbjct: 97  LDYLRE---------------CNRQEVSAVVLLYMATQISSAMEYLEKK 130

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I+EF  +GNL
Sbjct: 40  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNL 96
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   ++   L+  A Q+++ M YL+ +
Sbjct: 97  LDYLRE---------------CNRQEVSAVVLLYMATQISSAMEYLEKK 130

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 23/128 (17%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V      G+ K+  +T VAVK LKE   + E  + + E  +MK I +H N++ LLGV
Sbjct: 24  FGEVY----EGVWKKYSLT-VAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGV 75
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
           CT++ P Y+I EF  +GNL D+LR+                N   ++   L+  A Q+++
Sbjct: 76  CTREPPFYIITEFMTYGNLLDYLRE---------------CNRQEVSAVVLLYMATQISS 120
Query: 199 GMHYLQSR 206
            M YL+ +
Sbjct: 121 AMEYLEKK 128

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 19/119 (15%)
Query: 88  NGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV 147
            G+ K+  +T VAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+
Sbjct: 36  EGVWKKYSLT-VAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYI 91
Query: 148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           I+EF  +GNL D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 92  IIEFMTYGNLLDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 135

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I+EF  +GNL
Sbjct: 41  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNL 97
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 98  LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 131

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 40  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   ++   L+  A Q+++ M YL+ +
Sbjct: 97  LDYLRE---------------CNRQEVSAVVLLYMATQISSAMEYLEKK 130

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 40  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   ++   L+  A Q+++ M YL+ +
Sbjct: 97  LDYLRE---------------CNRQEVSAVVLLYMATQISSAMEYLEKK 130

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 38  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 94
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   ++   L+  A Q+++ M YL+ +
Sbjct: 95  LDYLRE---------------CNRQEVSAVVLLYMATQISSAMEYLEKK 128

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 45  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   ++   L+  A Q+++ M YL+ +
Sbjct: 102 LDYLRE---------------CNRQEVSAVVLLYMATQISSAMEYLEKK 135

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE     E+ + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 247 TVAVKTLKE--DTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 303
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   ++   L+  A Q+++ M YL+ +
Sbjct: 304 LDYLRE---------------CNRQEVSAVVLLYMATQISSAMEYLEKK 337

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 19/119 (15%)
Query: 88  NGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV 147
            G+ K+  +T VAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+
Sbjct: 31  EGVWKKYSLT-VAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYI 86
Query: 148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           I EF  +GNL D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 87  ITEFMTYGNLLDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 130

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 19/119 (15%)
Query: 88  NGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV 147
            G+ K+  +T VAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+
Sbjct: 36  EGVWKKYSLT-VAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYI 91
Query: 148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           I EF  +GNL D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 92  ITEFMTYGNLLDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 135

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 19/119 (15%)
Query: 88  NGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV 147
            G+ K+  +T VAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+
Sbjct: 31  EGVWKKYSLT-VAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYI 86
Query: 148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           I EF  +GNL D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 87  ITEFMTYGNLLDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 130

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 41  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 97
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 98  LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 131

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 45  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 102 LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 135

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 44  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 100
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 101 LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 134

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 42  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 99  LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 132

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 37  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 95
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP             N  VL    L   I  A 
Sbjct: 96  VVSQGQPTLVIMELMTRGDLKSYLRSLRPE----------MENNPVLAPPSLSKMIQMAG 145
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 146 EIADGMAYLNANK 158

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 28  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 86
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP             N  VL    L   I  A 
Sbjct: 87  VVSQGQPTLVIMELMTRGDLKSYLRSLRPE----------MENNPVLAPPSLSKMIQMAG 136
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 137 EIADGMAYLNANK 149

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 30  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 88
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP             N  VL    L   I  A 
Sbjct: 89  VVSQGQPTLVIMELMTRGDLKSYLRSLRPE----------MENNPVLAPPSLSKMIQMAG 138
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 139 EIADGMAYLNANK 151

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 42  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 99  LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 132

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 22  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 80
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP             N  VL    L   I  A 
Sbjct: 81  VVSQGQPTLVIMELMTRGDLKSYLRSLRPE----------MENNPVLAPPSLSKMIQMAG 130
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 131 EIADGMAYLNANK 143

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 31  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 89
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP             N  VL    L   I  A 
Sbjct: 90  VVSQGQPTLVIMELMTRGDLKSYLRSLRPE----------MENNPVLAPPSLSKMIQMAG 139
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 140 EIADGMAYLNANK 152

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 30  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 88
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP             N  VL    L   I  A 
Sbjct: 89  VVSQGQPTLVIMELMTRGDLKSYLRSLRPE----------MENNPVLAPPSLSKMIQMAG 138
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 139 EIADGMAYLNANK 151

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 53  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 109
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 110 LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 143

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 45  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 102 LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 135

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE   + E  + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 42  TVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 99  LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 132

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 59  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 117
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP             N  VL    L   I  A 
Sbjct: 118 VVSQGQPTLVIMELMTRGDLKSYLRSLRPE----------MENNPVLAPPSLSKMIQMAG 167
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 168 EIADGMAYLNANK 180

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 31  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 89
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP             N  VL    L   I  A 
Sbjct: 90  VVSQGQPTLVIMELMTRGDLKSYLRSLRPE----------MENNPVLAPPSLSKMIQMAG 139
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 140 EIADGMAYLNANK 152

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 24  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 82
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP             N  VL    L   I  A 
Sbjct: 83  VVSQGQPTLVIMELMTRGDLKSYLRSLRPE----------MENNPVLAPPSLSKMIQMAG 132
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 133 EIADGMAYLNANK 145

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK    H +++ LLG
Sbjct: 24  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLG 82
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL---ISFAY 194
           V +Q  P  VI+E    G+L+ +LR  RP             N  VL    L   I  A 
Sbjct: 83  VVSQGQPTLVIMELMTRGDLKSYLRSLRPE----------MENNPVLAPPSLSKMIQMAG 132
Query: 195 QVANGMHYLQSRK 207
           ++A+GM YL + K
Sbjct: 133 EIADGMAYLNANK 145

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           TVAVK LKE     E+ + + E  +MK I +H N++ LLGVCT++ P Y+I EF  +GNL
Sbjct: 286 TVAVKTLKE--DTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 342
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
            D+LR+                N   +    L+  A Q+++ M YL+ +
Sbjct: 343 LDYLRE---------------CNRQEVNAVVLLYMATQISSAMEYLEKK 376

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FGKV      G         VA+K LK+  ++  + +      M++   QH N++ LLGV
Sbjct: 22  FGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHEAMLRARLQHPNVVCLLGV 80
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            T+D PL +I  +  HG+L +FL    P S   S      T  + L   D +    Q+A 
Sbjct: 81  VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS-TDDDRTVKSALEPPDFVHLVAQIAA 139
Query: 199 GMHYLQSRKV 208
           GM YL S  V
Sbjct: 140 GMEYLSSHHV 149

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FGKV      G         VA+K LK+  ++  + +      M++   QH N++ LLGV
Sbjct: 39  FGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHEAMLRARLQHPNVVCLLGV 97
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            T+D PL +I  +  HG+L +FL    P S   S      T  + L   D +    Q+A 
Sbjct: 98  VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS-TDDDRTVKSALEPPDFVHLVAQIAA 156
Query: 199 GMHYLQSRKV 208
           GM YL S  V
Sbjct: 157 GMEYLSSHHV 166

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  AE   +        VAVK LK+  + A   D   E E++  + QH +I+   G
Sbjct: 27  AFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNL-QHEHIVKFYG 84
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VC    PL ++ E+  HG+L  FLR H P +      G        L    ++  A Q+A
Sbjct: 85  VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD-GQPRQAKGELGLSQMLHIASQIA 143
Query: 198 NGMHYLQSR 206
           +GM YL S+
Sbjct: 144 SGMVYLASQ 152

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 79  FGKV-IC---AEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIIN 134
           FGKV +C    E +   +Q     VAVK LK       + DL  E+E+++ +  H NI+ 
Sbjct: 34  FGKVELCRYDPEGDNTGEQ-----VAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVK 87
Query: 135 LLGVCTQDG--PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             G+CT+DG   + +I+EF P G+L+++L K                N N +  K  + +
Sbjct: 88  YKGICTEDGGNGIKLIMEFLPSGSLKEYLPK----------------NKNKINLKQQLKY 131
Query: 193 AYQVANGMHYLQSRK 207
           A Q+  GM YL SR+
Sbjct: 132 AVQICKGMDYLGSRQ 146

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 79  FGKV-IC---AEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIIN 134
           FGKV +C    E +   +Q     VAVK LK       + DL  E+E+++ +  H NI+ 
Sbjct: 22  FGKVELCRYDPEGDNTGEQ-----VAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVK 75
Query: 135 LLGVCTQDG--PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             G+CT+DG   + +I+EF P G+L+++L K                N N +  K  + +
Sbjct: 76  YKGICTEDGGNGIKLIMEFLPSGSLKEYLPK----------------NKNKINLKQQLKY 119
Query: 193 AYQVANGMHYLQSRK 207
           A Q+  GM YL SR+
Sbjct: 120 AVQICKGMDYLGSRQ 134

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 18/110 (16%)
Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK LK G    +    + E  +MK + QH  ++ L  V T++ P+Y+I EF   G+
Sbjct: 37  TKVAVKTLKPGTMSVQA--FLEEANLMKTL-QHDKLVRLYAVVTKEEPIYIITEFMAKGS 93
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           L DFL+                  G VL  K LI F+ Q+A GM Y++ +
Sbjct: 94  LLDFLKSDE--------------GGKVLLPK-LIDFSAQIAEGMAYIERK 128

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E +S+ + +D + E  ++     H NI+  +G
Sbjct: 57  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF-NHQNIVRCIG 115
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 116 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 165
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 166 CGCQYLEE 173

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 18/110 (16%)
Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK LK G    +    + E  +MK + QH  ++ L  V T++ P+Y+I E+   G+
Sbjct: 38  TKVAVKTLKPGTMSVQA--FLEEANLMKTL-QHDKLVRLYAVVTREEPIYIITEYMAKGS 94
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           L DFL+                  G VL  K LI F+ Q+A GM Y++ +
Sbjct: 95  LLDFLKSDE--------------GGKVLLPK-LIDFSAQIAEGMAYIERK 129

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++  +  H NI+  +G
Sbjct: 43  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL-NHQNIVRCIG 101
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 102 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 151
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 152 CGCQYLEE 159

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 23/130 (17%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VAVKM+KEG S +E         MMK+   H  ++   GVC+++ P+Y++ E+  +G L 
Sbjct: 35  VAVKMIKEG-SMSEDEFFQEAQTMMKL--SHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK-VGND-AVR-- 214
           ++LR H                G  L    L+   Y V  GM +L+S + +  D A R  
Sbjct: 92  NYLRSH----------------GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNC 135
Query: 215 FIGFDLCILV 224
            +  DLC+ V
Sbjct: 136 LVDRDLCVKV 145

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++  +  H NI+  +G
Sbjct: 57  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL-NHQNIVRCIG 115
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 116 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 165
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 166 CGCQYLEE 173

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 49  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 107
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 108 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 157
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 158 CGCQYLEE 165

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 81  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 139
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 140 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKYLASKK 172

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 54  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 112
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 113 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKYLASKK 145

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 43  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 101
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 102 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 151
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 152 CGCQYLEE 159

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 43  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 101
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 102 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 151
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 152 CGCQYLEE 159

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 69  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 127
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 128 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 177
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 178 CGCQYLEE 185

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 59  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 117
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 118 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 167
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 168 CGCQYLEE 175

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 34  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 92
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 93  VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 142
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 143 CGCQYLEE 150

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 80  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 138
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 139 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKYLASKK 171

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 83  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 141
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 191
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 192 CGCQYLEE 199

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 61  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 119
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 120 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKYLASKK 152

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 42  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 100
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 101 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 150
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 151 CGCQYLEE 158

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 62  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 121 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKYLASKK 153

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 60  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 118
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 119 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKYLASKK 151

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 60  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 118
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 119 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 168
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 169 CGCQYLEE 176

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 59  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 117
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 118 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKYLASKK 150

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 57  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 115
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 116 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 165
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 166 CGCQYLEE 173

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 42  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 100
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S L             DL+  A  +A
Sbjct: 101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML----------DLLHVARDIA 150
Query: 198 NGMHYLQS 205
            G  YL+ 
Sbjct: 151 CGCQYLEE 158

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 62  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 121 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKYLASKK 153

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 61  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 119
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 120 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKYLASKK 152

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 57  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 115
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM YL S+K
Sbjct: 116 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKYLASKK 148

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    ++   ++I+    V     FG+V         K+ I  +VA+K LK G+++ 
Sbjct: 34  TVHEFAKELDATNISIDK---VVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEK 88
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII L GV T+  P+ ++ E+  +G+L  FLRKH
Sbjct: 89  QRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    ++   ++I+    V     FG+V         K+ I  +VA+K LK G+++ 
Sbjct: 34  TVHEFAKELDATNISIDK---VVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEK 88
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII L GV T+  P+ ++ E+  +G+L  FLRKH
Sbjct: 89  QRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    ++   ++I+    V     FG+V         K+ I  +VA+K LK G+++ 
Sbjct: 34  TVHEFAKELDATNISIDK---VVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEK 88
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII L GV T+  P+ ++ E+  +G+L  FLRKH
Sbjct: 89  QRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    ++   ++I+    V     FG+V         K+ I  +VA+K LK G+++ 
Sbjct: 34  TVHEFAKELDATNISIDK---VVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEK 88
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII L GV T+  P+ ++ E+  +G+L  FLRKH
Sbjct: 89  QRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V         K+ I  +VA+K LK G+++ +  D + E  +M     H NII L GV
Sbjct: 29  FGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGV 85
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKH 164
            T+  P+ ++ E+  +G+L  FLRKH
Sbjct: 86  VTKSKPVMIVTEYMENGSLDSFLRKH 111

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    ++   ++I+    V     FG+V         K+ I  +VA+K LK G+++ 
Sbjct: 34  TVHEFAKELDATNISIDK---VVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEK 88
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII L GV T+  P+ ++ E+  +G+L  FLRKH
Sbjct: 89  QRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    ++   ++I+    V     FG+V         K+ I  +VA+K LK G+++ 
Sbjct: 34  TVHEFAKELDATNISIDK---VVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEK 88
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII L GV T+  P+ ++ E+  +G+L  FLRKH
Sbjct: 89  QRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    ++   ++I+    V     FG+V         K+ I  +VA+K LK G+++ 
Sbjct: 32  TVHEFAKELDATNISIDK---VVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEK 86
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII L GV T+  P+ ++ E+  +G+L  FLRKH
Sbjct: 87  QRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 138

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    ++   ++I+    V     FG+V         K+ I  +VA+K LK G+++ 
Sbjct: 34  TVHEFAKELDATNISIDK---VVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEK 88
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII L GV T+  P+ ++ E+  +G+L  FLRKH
Sbjct: 89  QRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V         K+ I  +VA+K LK G+++ +  D + E  +M     H NII L GV
Sbjct: 46  FGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGV 102
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKH 164
            T+  P+ ++ E+  +G+L  FLRKH
Sbjct: 103 VTKSKPVMIVTEYMENGSLDSFLRKH 128

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 27  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 77
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 78  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 121
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 122 GMAFIEER 129

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 28  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 78
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 79  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 122
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 123 GMAFIEER 130

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 26  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 76
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 77  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 120
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 121 GMAFIEER 128

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 26  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 76
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 77  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 120
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 121 GMAFIEER 128

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 31  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 81
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 82  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 125
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 126 GMAFIEER 133

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 32  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 82
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 83  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 126
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 127 GMAFIEER 134

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 34  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 84
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 85  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 128
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 129 GMAFIEER 136

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 32  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 82
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 83  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 126
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 127 GMAFIEER 134

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 21  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 76
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 77  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 120
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 121 TSQICKGMEYLGTKR 135

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 51  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 106
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 150
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 151 TSQICKGMEYLGTKR 165

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 21/111 (18%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           VA+K ++EG    E  D + E E MMK+   H  ++ L GVC +  P+ ++ EF  HG L
Sbjct: 34  VAIKTIREGAMSEE--DFIEEAEVMMKL--SHPKLVQLYGVCLEQAPICLVFEFMEHGCL 89
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            D+LR  R                 +   + L+     V  GM YL+   V
Sbjct: 90  SDYLRTQR----------------GLFAAETLLGMCLDVCEGMAYLEEASV 124

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 35  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 85
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 86  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 129
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 130 GMAFIEER 137

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 36  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 86
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 87  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 130
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 131 GMAFIEER 138

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 22  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 72
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 73  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 116
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 117 GMAFIEER 124

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 26  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 76
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 77  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 120
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 121 GMAFIEER 128

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  V
Sbjct: 21  FGEVWMGYYNGH------TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAV 71
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            TQ+ P+Y+I E+  +G+L DFL+   PS             G  LT   L+  A Q+A 
Sbjct: 72  VTQE-PIYIITEYMENGSLVDFLKT--PS-------------GIKLTINKLLDMAAQIAE 115
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 116 GMAFIEER 123

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 22/112 (19%)
Query: 99  VAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIINLLGVCTQDGP--LYVIVEFAPHG 155
           VAVK L+  HS  E + D   E+E++K + QH NI+   GVC   G   L +I+E+ P+G
Sbjct: 49  VAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 156 NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +LRD+L+KH+                  +    L+ +  Q+  GM YL +++
Sbjct: 106 SLRDYLQKHKER----------------IDHIKLLQYTSQICKGMEYLGTKR 141

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 20  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 75
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 119
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 120 TSQICKGMEYLGTKR 134

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 20  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 75
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 119
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 120 TSQICKGMEYLGTKR 134

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM +L S+K
Sbjct: 180 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKFLASKK 212

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 26  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 81
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 82  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 125
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 126 TSQICKGMEYLGTKR 140

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 18  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 73
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 74  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 117
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 118 TSQICKGMEYLGTKR 132

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 23  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 78
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 122
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 123 TSQICKGMEYLGTKR 137

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 25  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 80
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 81  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 124
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 125 TSQICKGMEYLGTKR 139

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 19  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 74
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 75  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 118
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 119 TSQICKGMEYLGTKR 133

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 24  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 79
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 80  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 123
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 124 TSQICKGMEYLGTKR 138

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 20  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 75
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 119
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 120 TSQICKGMEYLGTKR 134

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 38  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 93
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQY 137
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 138 TSQICKGMEYLGTKR 152

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 22/112 (19%)
Query: 99  VAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIINLLGVCTQDGP--LYVIVEFAPHG 155
           VAVK L+  HS  E + D   E+E++K + QH NI+   GVC   G   L +I+E+ P+G
Sbjct: 60  VAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 156 NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +LRD+L+KH+                  +    L+ +  Q+  GM YL +++
Sbjct: 117 SLRDYLQKHKER----------------IDHIKLLQYTSQICKGMEYLGTKR 152

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 62  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM +L S+K
Sbjct: 121 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKFLASKK 153

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 63  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 121
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM +L S+K
Sbjct: 122 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKFLASKK 154

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 63  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 121
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM +L S+K
Sbjct: 122 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKFLASKK 154

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V         K+ I   VA+K LK G++D +  D +SE  +M     H NII+L GV
Sbjct: 42  FGEVCSGRLKVPGKREI--CVAIKTLKAGYTDKQRRDFLSEASIMGQF-DHPNIIHLEGV 98
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            T+  P+ +I E+  +G+L  FLRK                N    T   L+     + +
Sbjct: 99  VTKCKPVMIITEYMENGSLDAFLRK----------------NDGRFTVIQLVGMLRGIGS 142
Query: 199 GMHYL 203
           GM YL
Sbjct: 143 GMKYL 147

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 62  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM +L S+K
Sbjct: 121 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKFLASKK 153

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           VA+K ++EG    E  D + E E MMK+   H  ++ L GVC +  P+ ++ EF  HG L
Sbjct: 35  VAIKTIREGAMSEE--DFIEEAEVMMKL--SHPKLVQLYGVCLEQAPICLVTEFMEHGCL 90
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
            D+LR  R                 +   + L+     V  GM YL+ 
Sbjct: 91  SDYLRTQR----------------GLFAAETLLGMCLDVCEGMAYLEE 122

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 60  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 118
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM +L S+K
Sbjct: 119 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKFLASKK 151

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 100 AVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEFAPHGNLR 158
           AVK L       E+   ++E  +MK    H N+++LLG+C + +G   V++ +  HG+LR
Sbjct: 67  AVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 125
Query: 159 DFLRK--HRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           +F+R   H P                  T KDLI F  QVA GM +L S+K
Sbjct: 126 NFIRNETHNP------------------TVKDLIGFGLQVAKGMKFLASKK 158

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V         K+ I   VA+K LK G++D +  D +SE  +M     H NII+L GV
Sbjct: 21  FGEVCSGRLKVPGKREI--CVAIKTLKAGYTDKQRRDFLSEASIMGQF-DHPNIIHLEGV 77
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            T+  P+ +I E+  +G+L  FLRK                N    T   L+     + +
Sbjct: 78  VTKCKPVMIITEYMENGSLDAFLRK----------------NDGRFTVIQLVGMLRGIGS 121
Query: 199 GMHYL 203
           GM YL
Sbjct: 122 GMKYL 126

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V         K+ I   VA+K LK G++D +  D +SE  +M     H NII+L GV
Sbjct: 27  FGEVCSGRLKVPGKREI--CVAIKTLKAGYTDKQRRDFLSEASIMGQF-DHPNIIHLEGV 83
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            T+  P+ +I E+  +G+L  FLRK                N    T   L+     + +
Sbjct: 84  VTKCKPVMIITEYMENGSLDAFLRK----------------NDGRFTVIQLVGMLRGIGS 127
Query: 199 GMHYL 203
           GM YL
Sbjct: 128 GMKYL 132

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           VA+K ++EG    E  D + E E MMK+   H  ++ L GVC +  P+ ++ EF  HG L
Sbjct: 37  VAIKTIREGAMSEE--DFIEEAEVMMKL--SHPKLVQLYGVCLEQAPICLVFEFMEHGCL 92
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
            D+LR  R                 +   + L+     V  GM YL+ 
Sbjct: 93  SDYLRTQR----------------GLFAAETLLGMCLDVCEGMAYLEE 124

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           VA+K ++EG    E  D + E E MMK+   H  ++ L GVC +  P+ ++ EF  HG L
Sbjct: 34  VAIKTIREGAMSEE--DFIEEAEVMMKL--SHPKLVQLYGVCLEQAPICLVFEFMEHGCL 89
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
            D+LR  R                 +   + L+     V  GM YL+ 
Sbjct: 90  SDYLRTQR----------------GLFAAETLLGMCLDVCEGMAYLEE 121

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 23  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 78
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+EF P+G+LR++L+KH+                  +    L+ +
Sbjct: 79  YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER----------------IDHIKLLQY 122
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 123 TSQICKGMEYLGTKR 137

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK  +E          + E  ++K    H NI+ L+GVCTQ  P+Y+++E    G+
Sbjct: 140 TLVAVKSCRETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGD 198
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
              FLR                T G  L  K L+      A GM YL+S+
Sbjct: 199 FLTFLR----------------TEGARLRVKTLLQMVGDAAAGMEYLESK 232

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK  +E          + E  ++K    H NI+ L+GVCTQ  P+Y+++E    G+
Sbjct: 140 TLVAVKSCRETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGD 198
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
              FLR                T G  L  K L+      A GM YL+S+
Sbjct: 199 FLTFLR----------------TEGARLRVKTLLQMVGDAAAGMEYLESK 232

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 19/107 (17%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K ++EG    E  D + E E+M M   H  ++ L GVC +  P+ ++ EF  HG L 
Sbjct: 32  VAIKTIREGAMSEE--DFIEEAEVM-MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 88
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
           D+LR  R                 +   + L+     V  GM YL+ 
Sbjct: 89  DYLRTQR----------------GLFAAETLLGMCLDVCEGMAYLEE 119

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK +K G    E    ++E  +MK + QH  ++ L  V T++ P+Y+I EF   G+
Sbjct: 40  TKVAVKTMKPGSMSVEA--FLAEANVMKTL-QHDKLVKLHAVVTKE-PIYIITEFMAKGS 95
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           L DFL+      G + PL              LI F+ Q+A GM +++ R
Sbjct: 96  LLDFLKS---DEGSKQPLPK------------LIDFSAQIAEGMAFIEQR 130

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 17/105 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K LK G+++ +  D +SE  +M     H N+I+L GV T+  P+ +I EF  +G+L 
Sbjct: 38  VAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYL 203
            FLR+                N    T   L+     +A GM YL
Sbjct: 97  SFLRQ----------------NDGQFTVIQLVGMLRGIAAGMKYL 125

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 19/110 (17%)
Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK LK+G    +    ++E  +MK + QH  ++ L  V TQ+ P+Y+I E+  +G+
Sbjct: 38  TKVAVKSLKQGSMSPDA--FLAEANLMKQL-QHQRLVRLYAVVTQE-PIYIITEYMENGS 93
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           L DFL+   PS             G  LT   L+  A Q+A GM +++ R
Sbjct: 94  LVDFLKT--PS-------------GIKLTINKLLDMAAQIAEGMAFIEER 128

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V         K+ I   VA+K LK G+++ +  D +SE  +M     H N+I+L GV
Sbjct: 46  FGEVCSGHLKLPGKREIF--VAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNVIHLEGV 102
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            T+  P+ +I EF  +G+L  FLR+                N    T   L+     +A 
Sbjct: 103 VTKSTPVMIITEFMENGSLDSFLRQ----------------NDGQFTVIQLVGMLRGIAA 146
Query: 199 GMHYL 203
           GM YL
Sbjct: 147 GMKYL 151

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 25/128 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V  A  N        T VAVK +K G    E    ++E  +MK + QH  ++ L  V
Sbjct: 195 FGEVWMATYNKH------TKVAVKTMKPGSMSVEA--FLAEANVMKTL-QHDKLVKLHAV 245
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            T++ P+Y+I EF   G+L DFL+      G + PL              LI F+ Q+A 
Sbjct: 246 VTKE-PIYIITEFMAKGSLLDFLKS---DEGSKQPLPK------------LIDFSAQIAE 289
Query: 199 GMHYLQSR 206
           GM +++ R
Sbjct: 290 GMAFIEQR 297

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V         K+ I  +VA+K LK G+++ +  D + E  +M     H NII L GV
Sbjct: 29  FGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGV 85
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKH 164
            T+  P+ ++ E   +G+L  FLRKH
Sbjct: 86  VTKSKPVMIVTEXMENGSLDSFLRKH 111

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    ++   ++I+    V     FG+V         K+ I  +VA+K LK G+++ 
Sbjct: 34  TVHEFAKELDATNISIDK---VVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEK 88
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII L GV T+  P+ ++ E   +G+L  FLRKH
Sbjct: 89  QRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH 140

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
           T VAVK +K G    E    ++E  +MK + QH  ++ L  V T++ P+Y+I EF   G+
Sbjct: 213 TKVAVKTMKPGSMSVEA--FLAEANVMKTL-QHDKLVKLHAVVTKE-PIYIITEFMAKGS 268
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR 206
           L DFL+      G + PL              LI F+ Q+A GM +++ R
Sbjct: 269 LLDFLKS---DEGSKQPL------------PKLIDFSAQIAEGMAFIEQR 303

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    ++   ++I+    V     FG+V         K+ I  +VA+K LK G+++ 
Sbjct: 34  TVHEFAKELDATNISIDK---VVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEK 88
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII L GV T+  P+ ++ E   +G+L  FLRKH
Sbjct: 89  QRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH 140

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           VA+K +KEG    +  D + E E MMK+   H  ++ L GVC +  P+ ++ EF  HG L
Sbjct: 54  VAIKTIKEGSMSED--DFIEEAEVMMKL--SHPKLVQLYGVCLEQAPICLVFEFMEHGCL 109
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
            D+LR  R                 +   + L+     V  GM YL+ 
Sbjct: 110 SDYLRTQR----------------GLFAAETLLGMCLDVCEGMAYLEE 141

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 23/130 (17%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM-DLVSEMEMMKMIGQHINIINLL 136
           +FG V  AE +G       + VAVK+L E    AE + + + E+ +MK + +H NI+  +
Sbjct: 49  SFGTVHRAEWHG-------SDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFM 100
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G  TQ   L ++ E+   G+L   L K   S   E            L E+  +S AY V
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHK---SGAREQ-----------LDERRRLSMAYDV 146
Query: 197 ANGMHYLQSR 206
           A GM+YL +R
Sbjct: 147 AKGMNYLHNR 156

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 23/130 (17%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM-DLVSEMEMMKMIGQHINIINLL 136
           +FG V  AE +G       + VAVK+L E    AE + + + E+ +MK + +H NI+  +
Sbjct: 49  SFGTVHRAEWHG-------SDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFM 100
Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G  TQ   L ++ E+   G+L   L K   S   E            L E+  +S AY V
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHK---SGAREQ-----------LDERRRLSMAYDV 146
Query: 197 ANGMHYLQSR 206
           A GM+YL +R
Sbjct: 147 AKGMNYLHNR 156

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
            VA+K LK G+++ +  D + E  +M     H N+++L GV T+  P+ +++EF  +G L
Sbjct: 73  AVAIKTLKVGYTEKQRRDFLCEASIMGQF-DHPNVVHLEGVVTRGKPVMIVIEFMENGAL 131
Query: 158 RDFLRKH 164
             FLRKH
Sbjct: 132 DAFLRKH 138

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 24/137 (17%)
Query: 72  YVKIK-----CAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMI 126
           YVKI+       FG+V         K+   + VA+K LK G+++ +  + +SE  +M   
Sbjct: 15  YVKIEEVIGAGEFGEVCRGRLKAPGKKE--SCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 127 GQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTE 186
            +H NII L GV T   P+ ++ EF  +G L  FLR                 N    T 
Sbjct: 73  -EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR----------------LNDGQFTV 115
Query: 187 KDLISFAYQVANGMHYL 203
             L+     +A+GM YL
Sbjct: 116 IQLVGMLRGIASGMRYL 132

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE-MMDLVSEMEMMKMIGQHINIIN 134
           K  FG V     +  L+      VAVK L+  HS  E + D   E+E++K + QH NI+ 
Sbjct: 23  KGNFGSVEMCRYDP-LQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSL-QHDNIVK 78
Query: 135 LLGVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             GVC   G   L +I+E+ P+G+LRD+L+ H                   +    L+ +
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH----------------AERIDHIKLLQY 122
Query: 193 AYQVANGMHYLQSRK 207
             Q+  GM YL +++
Sbjct: 123 TSQICKGMEYLGTKR 137

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 24/137 (17%)
Query: 72  YVKIK-----CAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMI 126
           YVKI+       FG+V         K+   + VA+K LK G+++ +  + +SE  +M   
Sbjct: 17  YVKIEEVIGAGEFGEVCRGRLKAPGKKE--SCVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 127 GQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTE 186
            +H NII L GV T   P+ ++ EF  +G L  FLR                 N    T 
Sbjct: 75  -EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR----------------LNDGQFTV 117
Query: 187 KDLISFAYQVANGMHYL 203
             L+     +A+GM YL
Sbjct: 118 IQLVGMLRGIASGMRYL 134

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 81  KVICAEANGILKQGIITT--------VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINI 132
           KVI A   G + +G++ T        VA+K LK G+++ + +D + E  +M     H NI
Sbjct: 50  KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH-NI 108
Query: 133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRK 163
           I L GV ++  P+ +I E+  +G L  FLR+
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLRE 139

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 34  EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  +    Y   L S       
Sbjct: 94  RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLAS------- 140
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
                LI +AYQ++  + YL+S++               ND V+   F L    +  DST
Sbjct: 141 -----LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS--RYMEDST 193
Query: 231 LLKTT 235
             K +
Sbjct: 194 YYKAS 198

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 11  EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  +    Y   L S       
Sbjct: 71  RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLAS------- 117
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
                LI +AYQ++  + YL+S++               ND V+   F L    +  DST
Sbjct: 118 -----LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS--RYMEDST 170
Query: 231 LLKTT 235
             K +
Sbjct: 171 YYKAS 175

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Query: 89  GILKQGIIT---TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL 145
           G++K G       VA+KM+KEG    +  + + E ++M M   H  ++ L GVCT+  P+
Sbjct: 18  GVVKYGKWRGQYDVAIKMIKEGSMSED--EFIEEAKVM-MNLSHEKLVQLYGVCTKQRPI 74
Query: 146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
           ++I E+  +G L ++LR+ R                +    + L+     V   M YL+S
Sbjct: 75  FIITEYMANGCLLNYLREMR----------------HRFQTQQLLEMCKDVCEAMEYLES 118
Query: 206 RK 207
           ++
Sbjct: 119 KQ 120

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Query: 89  GILKQGIIT---TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL 145
           G++K G       VA+KM+KEG    +  + + E ++M M   H  ++ L GVCT+  P+
Sbjct: 22  GVVKYGKWRGQYDVAIKMIKEGSMSED--EFIEEAKVM-MNLSHEKLVQLYGVCTKQRPI 78
Query: 146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
           ++I E+  +G L ++LR+ R                +    + L+     V   M YL+S
Sbjct: 79  FIITEYMANGCLLNYLREMR----------------HRFQTQQLLEMCKDVCEAMEYLES 122
Query: 206 RK 207
           ++
Sbjct: 123 KQ 124

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 8   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  +    Y   L S       
Sbjct: 68  RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLAS------- 114
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
                LI +AYQ++  + YL+S++               ND V+   F L    +  DST
Sbjct: 115 -----LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS--RYMEDST 167
Query: 231 LLKTT 235
             K +
Sbjct: 168 YYKAS 172

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 6   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  +    Y   L S       
Sbjct: 66  RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLAS------- 112
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
                LI +AYQ++  + YL+S++               ND V+   F L    +  DST
Sbjct: 113 -----LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS--RYMEDST 165
Query: 231 LLKTT 235
             K +
Sbjct: 166 YYKAS 170

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 6   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  +    Y   L S       
Sbjct: 66  RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLAS------- 112
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
                LI +AYQ++  + YL+S++               ND V+   F L    +  DST
Sbjct: 113 -----LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS--RYMEDST 165
Query: 231 LLKTT 235
             K +
Sbjct: 166 YYKAS 170

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Query: 89  GILKQGIIT---TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL 145
           G++K G       VA+KM+KEG    +  + + E ++M M   H  ++ L GVCT+  P+
Sbjct: 23  GVVKYGKWRGQYDVAIKMIKEGSMSED--EFIEEAKVM-MNLSHEKLVQLYGVCTKQRPI 79
Query: 146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
           ++I E+  +G L ++LR+ R                +    + L+     V   M YL+S
Sbjct: 80  FIITEYMANGCLLNYLREMR----------------HRFQTQQLLEMCKDVCEAMEYLES 123
Query: 206 RK 207
           ++
Sbjct: 124 KQ 125

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 9   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  +    Y   L S       
Sbjct: 69  RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLAS------- 115
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
                LI +AYQ++  + YL+S++               ND V+   F L    +  DST
Sbjct: 116 -----LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS--RYMEDST 168
Query: 231 LLKTT 235
             K +
Sbjct: 169 YYKAS 173

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Query: 89  GILKQGIIT---TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL 145
           G++K G       VA+KM+KEG    +  + + E ++M M   H  ++ L GVCT+  P+
Sbjct: 23  GVVKYGKWRGQYDVAIKMIKEGSMSED--EFIEEAKVM-MNLSHEKLVQLYGVCTKQRPI 79
Query: 146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
           ++I E+  +G L ++LR+ R                +    + L+     V   M YL+S
Sbjct: 80  FIITEYMANGCLLNYLREMR----------------HRFQTQQLLEMCKDVCEAMEYLES 123
Query: 206 RK 207
           ++
Sbjct: 124 KQ 125

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Query: 89  GILKQGIIT---TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL 145
           G++K G       VA+KM+KEG    +  + + E ++M M   H  ++ L GVCT+  P+
Sbjct: 38  GVVKYGKWRGQYDVAIKMIKEGSMSED--EFIEEAKVM-MNLSHEKLVQLYGVCTKQRPI 94
Query: 146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
           ++I E+  +G L ++LR+ R                +    + L+     V   M YL+S
Sbjct: 95  FIITEYMANGCLLNYLREMR----------------HRFQTQQLLEMCKDVCEAMEYLES 138
Query: 206 RK 207
           ++
Sbjct: 139 KQ 140

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 3   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  +    Y   L S       
Sbjct: 63  RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLAS------- 109
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
                LI +AYQ++  + YL+S++               ND V+   F L    +  DST
Sbjct: 110 -----LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS--RYMEDST 162
Query: 231 LLKTT 235
             K +
Sbjct: 163 YYKAS 167

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Query: 89  GILKQGIIT---TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL 145
           G++K G       VA+KM+KEG    +  + + E ++M M   H  ++ L GVCT+  P+
Sbjct: 29  GVVKYGKWRGQYDVAIKMIKEGSMSED--EFIEEAKVM-MNLSHEKLVQLYGVCTKQRPI 85
Query: 146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
           ++I E+  +G L ++LR+ R                +    + L+     V   M YL+S
Sbjct: 86  FIITEYMANGCLLNYLREMR----------------HRFQTQQLLEMCKDVCEAMEYLES 129
Query: 206 RK 207
           ++
Sbjct: 130 KQ 131

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Query: 89  GILKQGIIT---TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL 145
           G++K G       VA+KM+KEG    +  + + E ++M M   H  ++ L GVCT+  P+
Sbjct: 38  GVVKYGKWRGQYDVAIKMIKEGSMSED--EFIEEAKVM-MNLSHEKLVQLYGVCTKQRPI 94
Query: 146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS 205
           ++I E+  +G L ++LR+ R                +    + L+     V   M YL+S
Sbjct: 95  FIITEYMANGCLLNYLREMR----------------HRFQTQQLLEMCKDVCEAMEYLES 138
Query: 206 RK 207
           ++
Sbjct: 139 KQ 140

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 197 FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 247
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 248 VSEE-PIYIVTEYMSKGSLLDFLKGE---------------TGKYLRLPQLVDMAAQIAS 291
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 292 GMAYVE 297

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 280 FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 330
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 331 VSEE-PIYIVTEYMSKGSLLDFLKGE---------------TGKYLRLPQLVDMAAQIAS 374
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 375 GMAYVE 380

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 197 FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 247
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 248 VSEE-PIYIVTEYMSKGSLLDFLKGE---------------TGKYLRLPQLVDMAAQIAS 291
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 292 GMAYVE 297

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 24  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 74
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 75  VSEE-PIYIVTEYMSKGSLLDFLKGE---------------TGKYLRLPQLVDMAAQIAS 118
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 119 GMAYVE 124

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G+   E    + E ++MK + +H  ++ L  V
Sbjct: 198 FGEVWMGTWNGT------TRVAIKTLKPGNMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 248
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 249 VSEE-PIYIVTEYMSKGSLLDFLKGEM---------------GKYLRLPQLVDMAAQIAS 292
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 293 GMAYVE 298

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMD-LVSEMEMMKMIGQHINIINL 135
           +FG V   E +     G   +VAVK LK    S  E MD  + E+  M  +  H N+I L
Sbjct: 24  SFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRL 80
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            GV     P+ ++ E AP G+L D LRKH+               G+ L    L  +A Q
Sbjct: 81  YGVVLTP-PMKMVTELAPLGSLLDRLRKHQ---------------GHFLL-GTLSRYAVQ 123
Query: 196 VANGMHYLQSRKVGNDAVRFIGFDL 220
           VA GM YL+S+       RFI  DL
Sbjct: 124 VAEGMGYLESK-------RFIHRDL 141

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMD-LVSEMEMMKMIGQHINIINL 135
           +FG V   E +     G   +VAVK LK    S  E MD  + E+  M  +  H N+I L
Sbjct: 30  SFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRL 86
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            GV     P+ ++ E AP G+L D LRKH+               G+ L    L  +A Q
Sbjct: 87  YGVVLTP-PMKMVTELAPLGSLLDRLRKHQ---------------GHFLL-GTLSRYAVQ 129
Query: 196 VANGMHYLQSRKVGNDAVRFIGFDL 220
           VA GM YL+S+       RFI  DL
Sbjct: 130 VAEGMGYLESK-------RFIHRDL 147

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMD-LVSEMEMMKMIGQHINIINL 135
           +FG V   E +     G   +VAVK LK    S  E MD  + E+  M  +  H N+I L
Sbjct: 20  SFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRL 76
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            GV     P+ ++ E AP G+L D LRKH+               G+ L    L  +A Q
Sbjct: 77  YGVVLTP-PMKMVTELAPLGSLLDRLRKHQ---------------GHFLL-GTLSRYAVQ 119
Query: 196 VANGMHYLQSRKVGNDAVRFIGFDL 220
           VA GM YL+S+       RFI  DL
Sbjct: 120 VAEGMGYLESK-------RFIHRDL 137

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMD-LVSEMEMMKMIGQHINIINL 135
           +FG V   E +     G   +VAVK LK    S  E MD  + E+  M  +  H N+I L
Sbjct: 20  SFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRL 76
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            GV     P+ ++ E AP G+L D LRKH+               G+ L    L  +A Q
Sbjct: 77  YGVVLTP-PMKMVTELAPLGSLLDRLRKHQ---------------GHFLL-GTLSRYAVQ 119
Query: 196 VANGMHYLQSRKVGNDAVRFIGFDL 220
           VA GM YL+S+       RFI  DL
Sbjct: 120 VAEGMGYLESK-------RFIHRDL 137

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMD-LVSEMEMMKMIGQHINIINL 135
           +FG V   E +     G   +VAVK LK    S  E MD  + E+  M  +  H N+I L
Sbjct: 24  SFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRL 80
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            GV     P+ ++ E AP G+L D LRKH+               G+ L    L  +A Q
Sbjct: 81  YGVVLTP-PMKMVTELAPLGSLLDRLRKHQ---------------GHFLL-GTLSRYAVQ 123
Query: 196 VANGMHYLQSRKVGNDAVRFIGFDL 220
           VA GM YL+S+       RFI  DL
Sbjct: 124 VAEGMGYLESK-------RFIHRDL 141

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMD-LVSEMEMMKMIGQHINIINL 135
           +FG V   E +     G   +VAVK LK    S  E MD  + E+  M  +  H N+I L
Sbjct: 30  SFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRL 86
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            GV     P+ ++ E AP G+L D LRKH+               G+ L    L  +A Q
Sbjct: 87  YGVVLTP-PMKMVTELAPLGSLLDRLRKHQ---------------GHFLL-GTLSRYAVQ 129
Query: 196 VANGMHYLQSRKVGNDAVRFIGFDL 220
           VA GM YL+S+       RFI  DL
Sbjct: 130 VAEGMGYLESK-------RFIHRDL 147

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 52  SVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA 111
           +VH+    I    +TI   E V     FG+V         K+ +   VA+K LK G+++ 
Sbjct: 11  AVHEFAKEIEASCITI---ERVIGAGEFGEVCSGRLKLPGKREL--PVAIKTLKVGYTEK 65
Query: 112 EMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKH 164
           +  D + E  +M     H NII+L GV T+  P+ ++ E+  +G+L  FL+K+
Sbjct: 66  QRRDFLGEASIMGQF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN 117

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 6   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  + S                
Sbjct: 66  RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFS---------------- 107
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
           L    LI +AYQ++  + YL+S++               ND V+   F L    +  DST
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS--RYMEDST 165
Query: 231 LLKTT 235
             K +
Sbjct: 166 XXKAS 170

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK I +H  ++ L  V
Sbjct: 31  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKI-RHEKLVQLYAV 81
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 82  VSEE-PIYIVTEYMSKGSLLDFLKGE---------------MGKYLRLPQLVDMAAQIAS 125
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 126 GMAYVE 131

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 31  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 81
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y+++E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 82  VSEE-PIYIVIEYMSKGSLLDFLKGE---------------MGKYLRLPQLVDMAAQIAS 125
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 126 GMAYVE 131

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMD-LVSEMEMMKMIGQHINIINL 135
           +FG V   E +     G   +VAVK LK    S  E MD  + E+  M  +  H N+I L
Sbjct: 20  SFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRL 76
Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            GV     P+ ++ E AP G+L D LRKH+               G+ L    L  +A Q
Sbjct: 77  YGVVLTP-PMKMVTELAPLGSLLDRLRKHQ---------------GHFLL-GTLSRYAVQ 119
Query: 196 VANGMHYLQSRKVGNDAVRFIGFDL 220
           VA GM YL+S+       RFI  DL
Sbjct: 120 VAEGMGYLESK-------RFIHRDL 137

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 31  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 81
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y+++E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 82  VSEE-PIYIVIEYMSKGSLLDFLKGEM---------------GKYLRLPQLVDMAAQIAS 125
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 126 GMAYVE 131

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  + S                
Sbjct: 446 RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFS---------------- 487
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
           L    LI +AYQ++  + YL+S++               ND V+   F L    +  DST
Sbjct: 488 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS--RYMEDST 545
Query: 231 LLKTT 235
             K +
Sbjct: 546 YYKAS 550

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 22  FGEVWMGTWNGN------TKVAIKTLKPGTMSPE--SFLEEAQIMKKL-KHDKLVQLYAV 72
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L   +L+  A QVA 
Sbjct: 73  VSEE-PIYIVTEYMNKGSLLDFLKD---------------GEGRALKLPNLVDMAAQVAA 116
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 117 GMAYIE 122

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 197 FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 247
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 248 VSEE-PIYIVGEYMSKGSLLDFLKGE---------------TGKYLRLPQLVDMAAQIAS 291
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 292 GMAYVE 297

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 20  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 70
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 71  VSEE-PIYIVTEYMSKGSLLDFLKGE---------------MGKYLRLPQLVDMAAQIAS 114
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 115 GMAYVE 120

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 22  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 72
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 73  VSEE-PIYIVTEYMSKGSLLDFLKGE---------------MGKYLRLPQLVDMAAQIAS 116
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 117 GMAYVE 122

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 31  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 81
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 82  VSEE-PIYIVTEYMSKGSLLDFLKGEM---------------GKYLRLPQLVDMAAQIAS 125
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 126 GMAYVE 131

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 31  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 81
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 82  VSEE-PIYIVTEYMSKGSLLDFLKGE---------------MGKYLRLPQLVDMAAQIAS 125
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 126 GMAYVE 131

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 25/127 (19%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  
Sbjct: 30  CFGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYA 80
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A
Sbjct: 81  VVSEE-PIYIVCEYMSKGSLLDFLKGE---------------MGKYLRLPQLVDMAAQIA 124
Query: 198 NGMHYLQ 204
           +GM Y++
Sbjct: 125 SGMAYVE 131

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 28  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 78
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  + Q+A+
Sbjct: 79  VSEE-PIYIVTEYMNKGSLLDFLKGE---------------TGKYLRLPQLVDMSAQIAS 122
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 123 GMAYVE 128

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 28  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 78
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+Y++ E+   G+L DFL+                  G  L    L+  + Q+A+
Sbjct: 79  VSEE-PIYIVTEYMNKGSLLDFLKGE---------------TGKYLRLPQLVDMSAQIAS 122
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 123 GMAYVE 128

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K LK G+++ +  D +SE  +M     H NII L GV T+     ++ E+  +G+L 
Sbjct: 80  VAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 159 DFLRKH 164
            FLR H
Sbjct: 139 TFLRTH 144

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K LK G+++ +  D +SE  +M     H NII L GV T+     ++ E+  +G+L 
Sbjct: 80  VAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 159 DFLRKH 164
            FLR H
Sbjct: 139 TFLRTH 144

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 6   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  + S                
Sbjct: 66  RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFS---------------- 107
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
           L    LI +AYQ++  + YL+S++                D V+   F L    +  DST
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS--RYMEDST 165
Query: 231 LLKTT 235
             K +
Sbjct: 166 YYKAS 170

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 25/127 (19%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  
Sbjct: 30  CFGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYA 80
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V +++ P+Y+++E+   G L DFL+                  G  L    L+  A Q+A
Sbjct: 81  VVSEE-PIYIVMEYMSKGCLLDFLKGE---------------MGKYLRLPQLVDMAAQIA 124
Query: 198 NGMHYLQ 204
           +GM Y++
Sbjct: 125 SGMAYVE 131

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 25/127 (19%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  
Sbjct: 30  CFGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYA 80
Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V +++ P+Y++ E+   G L DFL+                  G  L    L+  A Q+A
Sbjct: 81  VVSEE-PIYIVTEYMSKGCLLDFLKGE---------------MGKYLRLPQLVDMAAQIA 124
Query: 198 NGMHYLQ 204
           +GM Y++
Sbjct: 125 SGMAYVE 131

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 27/131 (20%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           K  FG V+  +  G         VAVK +K   +DA     ++E  +M  + +H N++ L
Sbjct: 31  KGEFGDVMLGDYRG-------NKVAVKCIK---NDATAQAFLAEASVMTQL-RHSNLVQL 79
Query: 136 LGVCTQD-GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           LGV  ++ G LY++ E+   G+L D+LR            G +   G+      L+ F+ 
Sbjct: 80  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSR----------GRSVLGGDC-----LLKFSL 124
Query: 195 QVANGMHYLQS 205
            V   M YL+ 
Sbjct: 125 DVCEAMEYLEG 135

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 27/131 (20%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           K  FG V+  +  G         VAVK +K   +DA     ++E  +M  + +H N++ L
Sbjct: 22  KGEFGDVMLGDYRG-------NKVAVKCIK---NDATAQAFLAEASVMTQL-RHSNLVQL 70
Query: 136 LGVCTQD-GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           LGV  ++ G LY++ E+   G+L D+LR            G +   G+      L+ F+ 
Sbjct: 71  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSR----------GRSVLGGDC-----LLKFSL 115
Query: 195 QVANGMHYLQS 205
            V   M YL+ 
Sbjct: 116 DVCEAMEYLEG 126

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 35/171 (20%)
Query: 46  AFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQG--------IIT 97
           A  I +      +L+ +L  T    E+ KIK     V+ + A G + +G        +  
Sbjct: 2   AMGIRSGEAPNQALLRILKET----EFKKIK-----VLSSGAFGTVYKGLWIPEGEKVKI 52
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
            VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I++  P G L
Sbjct: 53  PVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLIMQLMPFGCL 110
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 111 LDYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 145

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 27/131 (20%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           K  FG V+  +  G         VAVK +K   +DA     ++E  +M  + +H N++ L
Sbjct: 16  KGEFGDVMLGDYRG-------NKVAVKCIK---NDATAQAFLAEASVMTQL-RHSNLVQL 64
Query: 136 LGVCTQD-GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           LGV  ++ G LY++ E+   G+L D+LR            G +   G+      L+ F+ 
Sbjct: 65  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSR----------GRSVLGGDC-----LLKFSL 109
Query: 195 QVANGMHYLQS 205
            V   M YL+ 
Sbjct: 110 DVCEAMEYLEG 120

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 40/185 (21%)
Query: 71  EYVKIKCAFGKVICAEANGILKQGIITT-------VAVKMLKEGHSDAEMMDLVSEMEMM 123
           E  + +   G+ I     G + QGI  +       VA+K  K   SD+     + E   M
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           +    H +I+ L+GV T++ P+++I+E    G LR FL+  + S                
Sbjct: 446 RQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFS---------------- 487
Query: 184 LTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDST 230
           L    LI +AYQ++  + YL+S++                D V+   F L    +  DST
Sbjct: 488 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS--RYMEDST 545
Query: 231 LLKTT 235
             K +
Sbjct: 546 YYKAS 550

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S 
Sbjct: 8   ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSP 59
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I++  P G L D++R+H+ +   
Sbjct: 60  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDN--- 114
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 115 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 139

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 35/171 (20%)
Query: 46  AFNIATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQG--------IIT 97
           A  I +      +L+ +L  T    E+ KIK     V+ + A G + +G        +  
Sbjct: 2   AMGIRSGEAPNQALLRILKET----EFKKIK-----VLSSGAFGTVYKGLWIPEGEKVKI 52
Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
            VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L
Sbjct: 53  PVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCL 110
Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 111 LDYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 145

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 33/170 (19%)
Query: 46  AFNIATSVHDKVSLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITT 98
           A  I +      +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   
Sbjct: 2   AMGIRSGEAPNQALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIP 53
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L 
Sbjct: 54  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLL 111
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 112 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 145

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 33/170 (19%)
Query: 46  AFNIATSVHDKVSLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITT 98
           A  I +      +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   
Sbjct: 2   AMGIRSGEAPNQALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIP 53
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L 
Sbjct: 54  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLL 111
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 112 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 145

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S 
Sbjct: 7   ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSP 58
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I +  P G L D++R+H+ +   
Sbjct: 59  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDN--- 113
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 114 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 138

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 27/131 (20%)
Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           K  FG V+  +  G         VAVK +K   +DA     ++E  +M  + +H N++ L
Sbjct: 203 KGEFGDVMLGDYRG-------NKVAVKCIK---NDATAQAFLAEASVMTQL-RHSNLVQL 251
Query: 136 LGVCTQD-GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           LGV  ++ G LY++ E+   G+L D+LR            G +   G+      L+ F+ 
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSR----------GRSVLGGDC-----LLKFSL 296
Query: 195 QVANGMHYLQS 205
            V   M YL+ 
Sbjct: 297 DVCEAMEYLEG 307

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 26/136 (19%)
Query: 81  KVICAEANGILKQG--------IITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINI 132
           KV+ + A G + +G        +   VA+K L+E  S     +++ E  +M  +  + ++
Sbjct: 21  KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHV 79
Query: 133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             LLG+C     + +I +  P G L D++R+H+ +      +GS Y          L+++
Sbjct: 80  CRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN------IGSQY----------LLNW 122
Query: 193 AYQVANGMHYLQSRKV 208
             Q+A GM+YL+ R++
Sbjct: 123 CVQIAKGMNYLEDRRL 138

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S 
Sbjct: 9   ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSP 60
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I++  P G L D++R+H+ +   
Sbjct: 61  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN--- 115
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 116 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 140

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 25/126 (19%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  V
Sbjct: 21  FGEVWMGTWNGT------TRVAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAV 71
Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN 198
            +++ P+ ++ E+   G+L DFL+                  G  L    L+  A Q+A+
Sbjct: 72  VSEE-PIXIVTEYMSKGSLLDFLKGE---------------TGKYLRLPQLVDMAAQIAS 115
Query: 199 GMHYLQ 204
           GM Y++
Sbjct: 116 GMAYVE 121

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L 
Sbjct: 47  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 105 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 138

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S 
Sbjct: 9   ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSP 60
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I++  P G L D++R+H+ +   
Sbjct: 61  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN--- 115
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 116 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 140

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S 
Sbjct: 11  ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSP 62
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I++  P G L D++R+H+ +   
Sbjct: 63  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN--- 117
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 118 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 142

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I++  P G L 
Sbjct: 47  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLIMQLMPFGCLL 104
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 105 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 138

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L 
Sbjct: 41  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLL 98
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 99  DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 132

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I++  P G L 
Sbjct: 48  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLIMQLMPFGCLL 105
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 106 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 139

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S 
Sbjct: 11  ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSP 62
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I++  P G L D++R+H+ +   
Sbjct: 63  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN--- 117
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 118 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 142

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I++  P G L 
Sbjct: 49  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLIMQLMPFGCLL 106
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 107 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 140

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 33/159 (20%)
Query: 57  VSLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHS 109
           ++L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S
Sbjct: 3   MALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATS 54
Query: 110 DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSG 169
                +++ E  +M  +  + ++  LLG+C     + +I +  P G L D++R+H+ +  
Sbjct: 55  PKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN-- 110
Query: 170 YESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
               +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 111 ----IGSQY----------LLNWCVQIAEGMNYLEDRRL 135

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I++  P G L 
Sbjct: 50  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLIMQLMPFGCLL 107
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 108 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 141

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S 
Sbjct: 9   ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSP 60
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I +  P G L D++R+H+ +   
Sbjct: 61  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--- 115
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 116 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 140

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L 
Sbjct: 47  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 105 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 138

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L 
Sbjct: 49  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLL 106
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 107 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 140

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L 
Sbjct: 72  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLL 129
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 130 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 163

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 26/132 (19%)
Query: 79  FGKV--ICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FGKV   C +       G    VAVK LKEG           E+E+++ +  H +I+   
Sbjct: 22  FGKVSLYCYDPT---NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-YHEHIVKYK 77
Query: 137 GVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           G C   G   + +++E+ P G+LRD+L +H         +G A           L+ FA 
Sbjct: 78  GCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--------CVGLA----------QLLLFAQ 119
Query: 195 QVANGMHYLQSR 206
           Q+  GM YL ++
Sbjct: 120 QICEGMAYLHAQ 131

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L 
Sbjct: 47  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 105 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 138

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S 
Sbjct: 17  ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSP 68
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I +  P G L D++R+H+ +   
Sbjct: 69  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--- 123
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 124 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 148

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L 
Sbjct: 50  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLL 107
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 108 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 141

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR 158
           VA+K L+E  S     +++ E  +M  +  + ++  LLG+C     + +I +  P G L 
Sbjct: 50  VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLL 107
Query: 159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           D++R+H+ +      +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 108 DYVREHKDN------IGSQY----------LLNWCVQIAKGMNYLEDRRL 141

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S 
Sbjct: 13  ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSP 64
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I +  P G L D++R+H+ +   
Sbjct: 65  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--- 119
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 120 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 144

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 26/132 (19%)
Query: 79  FGKV--ICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FGKV   C +       G    VAVK LKEG           E+E+++ +  H +I+   
Sbjct: 21  FGKVSLYCYDPT---NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-YHEHIVKYK 76
Query: 137 GVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           G C   G   + +++E+ P G+LRD+L +H         +G A           L+ FA 
Sbjct: 77  GCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--------CVGLA----------QLLLFAQ 118
Query: 195 QVANGMHYLQSR 206
           Q+  GM YL ++
Sbjct: 119 QICEGMAYLHAQ 130

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+K L+E  S 
Sbjct: 10  ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSP 61
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I +  P G L D++R+H+ +   
Sbjct: 62  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--- 116
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 117 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 141

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIVEFAPHGN 156
           VAVK L+    D +  D   E++++K +     I+   GV    G   L +++E+ P G 
Sbjct: 55  VAVKQLQHSGPD-QQRDFQREIQILKALHSDF-IVKYRGVSYGPGRQSLRLVMEYLPSGC 112
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           LRDFL++HR                  L    L+ ++ Q+  GM YL SR+ 
Sbjct: 113 LRDFLQRHR----------------ARLDASRLLLYSSQICKGMEYLGSRRC 148

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIVEFAPHGN 156
           VAVK L+    D +  D   E++++K +     I+   GV    G   L +++E+ P G 
Sbjct: 43  VAVKQLQHSGPD-QQRDFQREIQILKALHSDF-IVKYRGVSYGPGRQSLRLVMEYLPSGC 100
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           LRDFL++HR                  L    L+ ++ Q+  GM YL SR+ 
Sbjct: 101 LRDFLQRHR----------------ARLDASRLLLYSSQICKGMEYLGSRRC 136

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIVEFAPHGN 156
           VAVK L+    D +  D   E++++K +     I+   GV    G   L +++E+ P G 
Sbjct: 42  VAVKQLQHSGPD-QQRDFQREIQILKALHSDF-IVKYRGVSYGPGRQSLRLVMEYLPSGC 99
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           LRDFL++HR                  L    L+ ++ Q+  GM YL SR+ 
Sbjct: 100 LRDFLQRHR----------------ARLDASRLLLYSSQICKGMEYLGSRRC 135

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 99  VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIVEFAPHGN 156
           VAVK L+    D +  D   E++++K +     I+   GV    G   L +++E+ P G 
Sbjct: 39  VAVKQLQHSGPD-QQRDFQREIQILKALHSDF-IVKYRGVSYGPGRPELRLVMEYLPSGC 96
Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           LRDFL++HR                  L    L+ ++ Q+  GM YL SR+ 
Sbjct: 97  LRDFLQRHR----------------ARLDASRLLLYSSQICKGMEYLGSRRC 132

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 24/136 (17%)
Query: 79  FGKVICAEANGILKQGIITTVAVKMLK-EGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           FG V+  E N   + G    VAVK +K +  S  E+ + +SE   MK    H N+I LLG
Sbjct: 47  FGSVM--EGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLG 103
Query: 138 VCTQ------DGPLYVIVEFAPHGNLRDFLRKHRPSSGYES-PLGSAYTNGNVLTEKDLI 190
           VC +        P+ VI+ F  +G+L  +L   R  +G +  PL +            L+
Sbjct: 104 VCIEMSSQGIPKPM-VILPFMKYGDLHTYLLYSRLETGPKHIPLQT------------LL 150
Query: 191 SFAYQVANGMHYLQSR 206
            F   +A GM YL +R
Sbjct: 151 KFMVDIALGMEYLSNR 166

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 68/162 (41%), Gaps = 28/162 (17%)
Query: 79  FGKV--ICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FGKV   C +       G    VAVK LK             E+++++ +  H +II   
Sbjct: 27  FGKVSLYCYDPTN---DGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL-YHEHIIKYK 82
Query: 137 GVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           G C   G   L +++E+ P G+LRD+L +H         +G A           L+ FA 
Sbjct: 83  GCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--------IGLA----------QLLLFAQ 124
Query: 195 QVANGMHYLQSRKV--GNDAVRFIGFDLCILVFFHDSTLLKT 234
           Q+  GM YL S+     N A R +  D   LV   D  L K 
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA 166

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 33/158 (20%)
Query: 58  SLINVLTVTINSQEYVKIKC----AFGKVICAEANGI-LKQG--IITTVAVKMLKEGHSD 110
           +L+ +L  T    E+ KIK     AFG V      G+ + +G  +   VA+  L+E  S 
Sbjct: 41  ALLRILKET----EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIMELREATSP 92
Query: 111 AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY 170
               +++ E  +M  +  + ++  LLG+C     + +I +  P G L D++R+H+ +   
Sbjct: 93  KANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--- 147
Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              +GS Y          L+++  Q+A GM+YL+ R++
Sbjct: 148 ---IGSQY----------LLNWCVQIAKGMNYLEDRRL 172

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 28/162 (17%)
Query: 79  FGKV--ICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FGKV   C +       G    VAVK LK             E+++++ +  H +II   
Sbjct: 27  FGKVSLYCYDPTN---DGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL-YHEHIIKYK 82
Query: 137 GVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           G C   G   L +++E+ P G+LRD+L +H         +G A           L+ FA 
Sbjct: 83  GCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--------IGLA----------QLLLFAQ 124
Query: 195 QVANGMHYLQSRKV--GNDAVRFIGFDLCILVFFHDSTLLKT 234
           Q+  GM YL ++     N A R +  D   LV   D  L K 
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA 166

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Query: 81  KVICAEANGILKQGIITT--------VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINI 132
           KV+ + A G + +GI           VA+K+L E       ++ + E  +M  +  H ++
Sbjct: 44  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHL 102
Query: 133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
           + LLGVC     + ++ +  PHG L +++ +H+ + G +                 L+++
Sbjct: 103 VRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQL----------------LLNW 145
Query: 193 AYQVANGMHYLQSRKV 208
             Q+A GM YL+ R++
Sbjct: 146 CVQIAKGMMYLEERRL 161

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 26/132 (19%)
Query: 79  FGKV--ICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           FGKV   C +       G    VAVK LK             E+++++ +  H +II   
Sbjct: 44  FGKVSLYCYDPT---NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYK 99
Query: 137 GVCTQDGP--LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           G C   G   L +++E+ P G+LRD+L +H         +G A           L+ FA 
Sbjct: 100 GCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--------IGLA----------QLLLFAQ 141
Query: 195 QVANGMHYLQSR 206
           Q+  GM YL ++
Sbjct: 142 QICEGMAYLHAQ 153

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 33/148 (22%)
Query: 81  KVICAEANGILKQGIITT--------VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINI 132
           KV+ + A G + +GI           VA+K+L+E  S     +++ E  +M  +G    +
Sbjct: 23  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPY-V 81
Query: 133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
             LLG+C     + ++ +  P+G L D +R++R        LGS          +DL+++
Sbjct: 82  SRLLGICLTST-VQLVTQLMPYGCLLDHVRENR------GRLGS----------QDLLNW 124
Query: 193 AYQVANGMHYLQSRKVGNDAVRFIGFDL 220
             Q+A GM YL+        VR +  DL
Sbjct: 125 CMQIAKGMSYLED-------VRLVHRDL 145

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Query: 81  KVICAEANGILKQGIITT--------VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINI 132
           KV+ + A G + +GI           VA+K+L E       ++ + E  +M  +  H ++
Sbjct: 21  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHL 79
Query: 133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
           + LLGVC     + ++ +  PHG L +++ +H+ + G +                 L+++
Sbjct: 80  VRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQL----------------LLNW 122
Query: 193 AYQVANGMHYLQSRKV 208
             Q+A GM YL+ R++
Sbjct: 123 CVQIAKGMMYLEERRL 138

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 17/80 (21%)
Query: 129 HINIINLLGV-CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEK 187
           H N++ L+G+    +G  +V++ +  HG+L  F+R             S   N  V   K
Sbjct: 81  HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIR-------------SPQRNPTV---K 124
Query: 188 DLISFAYQVANGMHYLQSRK 207
           DLISF  QVA GM YL  +K
Sbjct: 125 DLISFGLQVARGMEYLAEQK 144

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  A      K      +A   + E  S+ E+ D + E+E++     H  I+ LLG
Sbjct: 31  AFGKVYKA------KNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLG 83
Query: 138 VCTQDGPLYVIVEFAPHG 155
               DG L++++EF P G
Sbjct: 84  AYYHDGKLWIMIEFCPGG 101

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  A      K      +A   + E  S+ E+ D + E+E++     H  I+ LLG
Sbjct: 23  AFGKVYKA------KNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLG 75
Query: 138 VCTQDGPLYVIVEFAPHG 155
               DG L++++EF P G
Sbjct: 76  AYYHDGKLWIMIEFCPGG 93

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 24/124 (19%)
Query: 89  GILKQGIIT------TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD 142
           G ++QG+         VA+K+LK+G   A+  +++ E ++M  +  +  I+ L+GVC  +
Sbjct: 350 GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAE 408
Query: 143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHY 202
             L +++E A  G L  FL   R     E P+             ++    +QV+ GM Y
Sbjct: 409 A-LMLVMEMAGGGPLHKFLVGKR----EEIPVS------------NVAELLHQVSMGMKY 451
Query: 203 LQSR 206
           L+ +
Sbjct: 452 LEEK 455

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	258
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-65
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-64
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-64
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-62
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-62
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-61
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	6e-61
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-60
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	4e-60
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	9e-58
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-54
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-54
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-53
4aoj_A	329	High affinity nerve growth factor receptor; transf	9e-53
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-52
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-52
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-46
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-46
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-45
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-44
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-43
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-43
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-43
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-42
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	9e-42
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-41
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-41
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-40
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-40
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-39
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-39
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-39
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-38
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-37
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	6e-37
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-35
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-35
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	5e-35
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-34
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-34
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-34
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-33
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-32
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-32
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-32
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-32
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-31
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-31
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	6e-31
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-30
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-29
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-29
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-27
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-23
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-23
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-23
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-23
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-22
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-22
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-21
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-20
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-20
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-16
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-15
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-14
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-14
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-14
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-13
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-13
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	8e-13
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-12
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-12
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-12
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-12
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-12
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-12
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	9e-12
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-11
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-11
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-11
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	9e-11
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-10
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-10
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-10
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-09
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-09
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	7e-09
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-08
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	7e-08
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	7e-08
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-07
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-07
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	5e-07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-07
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-07
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	6e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-06
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-06
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-06
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	6e-06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	6e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-06
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	7e-06
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	7e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	9e-06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-06
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	9e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-05
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-05
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-05
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-05
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	6e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	7e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	8e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	8e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	9e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-04
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	5e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	6e-04
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-04

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  206 bits (527), Expect = 1e-65
 Identities = 60/137 (43%), Positives = 81/137 (59%), Gaps = 6/137 (4%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A GI K G+   VAVKMLKE    +E   L+SE++MM  +G H NI+NLLG
Sbjct: 57  AFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLG 116

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGY------ESPLGSAYTNGNVLTEKDLIS 191
            CT  GP+Y+I E+  +G+L ++LR  R                    + NVLT +DL+ 
Sbjct: 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLC 176

Query: 192 FAYQVANGMHYLQSRKV 208
           FAYQVA GM +L+ +  
Sbjct: 177 FAYQVAKGMEFLEFKSC 193

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  202 bits (517), Expect = 2e-64
 Identities = 56/132 (42%), Positives = 78/132 (59%), Gaps = 1/132 (0%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A G++K     TVAVKMLK      E   L+SE++++  +G H+NI+NLLG
Sbjct: 35  AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 94

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPL-GSAYTNGNVLTEKDLISFAYQV 196
            CT  GP  VI E+  +G+L +FLR+ R S             +   L  +DL+SF+YQV
Sbjct: 95  ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV 154

Query: 197 ANGMHYLQSRKV 208
           A GM +L S+  
Sbjct: 155 AKGMAFLASKNC 166

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  203 bits (518), Expect = 2e-64
 Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 3/130 (2%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV+ A A G+ K+  +  VAVKMLK      E   L+SE+++M  +GQH NI+NLLG
Sbjct: 58  AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            CT  GP+ VI E+  +G+L +FLR+       +     A    +  + +DL+ F+ QVA
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA---NSTASTRDLLHFSSQVA 174

Query: 198 NGMHYLQSRK 207
            GM +L S+ 
Sbjct: 175 QGMAFLASKN 184

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  197 bits (502), Expect = 3e-62
 Identities = 60/137 (43%), Positives = 83/137 (60%), Gaps = 8/137 (5%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FGKV+ A A  +  +   TTVAVKMLKE  S +E+ DL+SE  ++K +  H ++I L G
Sbjct: 35  EFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HPHVIKLYG 93

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRP-------SSGYESPLGSAYTNGNVLTEKDLI 190
            C+QDGPL +IVE+A +G+LR FLR+ R        S G  +     + +   LT  DLI
Sbjct: 94  ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153

Query: 191 SFAYQVANGMHYLQSRK 207
           SFA+Q++ GM YL   K
Sbjct: 154 SFAWQISQGMQYLAEMK 170

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  196 bits (501), Expect = 4e-62
 Identities = 61/131 (46%), Positives = 82/131 (62%), Gaps = 2/131 (1%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 39  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98

Query: 138 VCTQ-DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
            CT+  GPL VIVEF   GNL  +LR  R        +       + LT + LI +++QV
Sbjct: 99  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLICYSFQV 157

Query: 197 ANGMHYLQSRK 207
           A GM +L SRK
Sbjct: 158 AKGMEFLASRK 168

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  196 bits (501), Expect = 2e-61
 Identities = 75/132 (56%), Positives = 90/132 (68%), Gaps = 3/132 (2%)

Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            FG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 93  CFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 152

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 153 LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 211

Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 212 LARGMEYLASQK 223

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  194 bits (495), Expect = 6e-61
 Identities = 76/132 (57%), Positives = 91/132 (68%), Gaps = 3/132 (2%)

Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA GI K       TVAVKMLK+  ++ ++ DLVSEMEMMKMIG+H NIINL
Sbjct: 47  AFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 106

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++LR  RP  G E            +T KDL+S  YQ
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRP-PGMEYSYDINRVPEEQMTFKDLVSCTYQ 165

Query: 196 VANGMHYLQSRK 207
           +A GM YL S+K
Sbjct: 166 LARGMEYLASQK 177

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  195 bits (497), Expect = 1e-60
 Identities = 75/132 (56%), Positives = 94/132 (71%), Gaps = 3/132 (2%)

Query: 78  AFGKVICAEANGILKQ--GIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEMEMMKMIG+H NIINL
Sbjct: 81  AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 140

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++     L+ KDL+S AYQ
Sbjct: 141 LGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYSYNPSHNPEEQLSSKDLVSCAYQ 199

Query: 196 VANGMHYLQSRK 207
           VA GM YL S+K
Sbjct: 200 VARGMEYLASKK 211

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  192 bits (489), Expect = 4e-60
 Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 4/130 (3%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V+ A      K G+    A+K +KE  S  +  D   E+E++  +G H NIINLLG
Sbjct: 37  NFGQVLKARIK---KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG 93

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            C   G LY+ +E+APHGNL DFLRK R     +     A +  + L+ + L+ FA  VA
Sbjct: 94  ACEHRGYLYLAIEYAPHGNLLDFLRKSRV-LETDPAFAIANSTASTLSSQQLLHFAADVA 152

Query: 198 NGMHYLQSRK 207
            GM YL  ++
Sbjct: 153 RGMDYLSQKQ 162

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  186 bits (474), Expect = 9e-58
 Identities = 48/137 (35%), Positives = 64/137 (46%), Gaps = 8/137 (5%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V  A A G+L     T VAVKMLKE  S     D   E  +M     + NI+ LLG
Sbjct: 59  AFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLG 117

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYT-------NGNVLTEKDLI 190
           VC    P+ ++ E+  +G+L +FLR   P +          T           L+  + +
Sbjct: 118 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQL 177

Query: 191 SFAYQVANGMHYLQSRK 207
             A QVA GM YL  RK
Sbjct: 178 CIARQVAAGMAYLSERK 194

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  176 bits (449), Expect = 1e-54
 Identities = 41/130 (31%), Positives = 55/130 (42%), Gaps = 2/130 (1%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FGKV      G         VA+K LK+        +   E  +     QH N++ LLG
Sbjct: 21  RFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA-RLQHPNVVCLLG 79

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V T+D PL +I  +  HG+L +FL    P S   S      T  + L   D +    Q+A
Sbjct: 80  VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST-DDDRTVKSALEPPDFVHLVAQIA 138

Query: 198 NGMHYLQSRK 207
            GM YL S  
Sbjct: 139 AGMEYLSSHH 148

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  177 bits (450), Expect = 2e-54
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V    A G++K    T VA+K + E  S  E ++ ++E  +MK      +++ LLG
Sbjct: 37  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLG 95

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V +Q  P  VI+E    G+L+ +LR  RP+      L          +   +I  A ++A
Sbjct: 96  VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP-------PSLSKMIQMAGEIA 148

Query: 198 NGMHYLQSRK 207
           +GM YL + K
Sbjct: 149 DGMAYLNANK 158

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  173 bits (441), Expect = 2e-53
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  AE   +        VAVK LK+  + A   D   E E++  + QH +I+   G
Sbjct: 27  AFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNL-QHEHIVKFYG 84

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VC    PL ++ E+  HG+L  FLR H P +      G        L    ++  A Q+A
Sbjct: 85  VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDA-MILVDGQPRQAKGELGLSQMLHIASQIA 143

Query: 198 NGMHYLQSRK 207
           +GM YL S+ 
Sbjct: 144 SGMVYLASQH 153

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  173 bits (440), Expect = 9e-53
 Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 4/130 (3%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  AE + +L +     VAVK LKE  S++   D   E E++ M+ QH +I+   G
Sbjct: 53  AFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTML-QHQHIVRFFG 110

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCT+  PL ++ E+  HG+L  FLR H P +  +   G        L    L++ A QVA
Sbjct: 111 VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDA--KLLAGGEDVAPGPLGLGQLLAVASQVA 168

Query: 198 NGMHYLQSRK 207
            GM YL    
Sbjct: 169 AGMVYLAGLH 178

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  173 bits (440), Expect = 2e-52
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 11/130 (8%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 83  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 141

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S           L   DL+  A  +A
Sbjct: 142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS----------LAMLDLLHVARDIA 191

Query: 198 NGMHYLQSRK 207
            G  YL+   
Sbjct: 192 CGCQYLEENH 201

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  171 bits (436), Expect = 3e-52
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 11/130 (8%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V   + +G+        VAVK L E  S+ + +D + E  ++     H NI+  +G
Sbjct: 42  AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG 100

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V  Q  P ++++E    G+L+ FLR+ RP     S           L   DL+  A  +A
Sbjct: 101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS----------LAMLDLLHVARDIA 150

Query: 198 NGMHYLQSRK 207
            G  YL+   
Sbjct: 151 CGCQYLEENH 160

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  156 bits (397), Expect = 2e-46
 Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 20/136 (14%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLK-EGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
            FG V+        + G    VAVK +K +  S  E+ + +SE   MK    H N+I LL
Sbjct: 46  EFGSVMEGNLKQ--EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLL 102

Query: 137 GVCTQDGP-----LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLIS 191
           GVC +          VI+ F  +G+L  +L   R             T    +  + L+ 
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLE-----------TGPKHIPLQTLLK 151

Query: 192 FAYQVANGMHYLQSRK 207
           F   +A GM YL +R 
Sbjct: 152 FMVDIALGMEYLSNRN 167

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  156 bits (396), Expect = 2e-46
 Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 21/137 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLL 136
            FG V  A+     + G    VAVKMLK    + +++ + + E   MK    H ++  L+
Sbjct: 35  EFGSVREAQLKQ--EDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLV 91

Query: 137 GVCTQDGP------LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLI 190
           GV  +           VI+ F  HG+L  FL   R              N   L  + L+
Sbjct: 92  GVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG-----------ENPFNLPLQTLV 140

Query: 191 SFAYQVANGMHYLQSRK 207
            F   +A GM YL SR 
Sbjct: 141 RFMVDIACGMEYLSSRN 157

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  152 bits (385), Expect = 7e-45
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 20/131 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V           G     AVK L       E+   ++E  +MK    H N+++LLG
Sbjct: 37  HFGCVYHGTLLD--NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLG 93

Query: 138 VCTQ-DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           +C + +G   V++ +  HG+LR+F+R    +                 T KDLI F  QV
Sbjct: 94  ICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----------------PTVKDLIGFGLQV 137

Query: 197 ANGMHYLQSRK 207
           A GM YL S+K
Sbjct: 138 AKGMKYLASKK 148

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  151 bits (384), Expect = 4e-44
 Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 20/131 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V           G     AVK L       E+   ++E  +MK    H N+++LLG
Sbjct: 101 HFGCVYHGTLLD--NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLG 157

Query: 138 VCTQ-DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           +C + +G   V++ +  HG+LR+F+R    +                 T KDLI F  QV
Sbjct: 158 ICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----------------PTVKDLIGFGLQV 201

Query: 197 ANGMHYLQSRK 207
           A GM +L S+K
Sbjct: 202 AKGMKFLASKK 212

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  148 bits (376), Expect = 1e-43
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 20/131 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V   E     +       A+K L       ++   + E  +M+ +  H N++ L+G
Sbjct: 33  HFGVVYHGEYID--QAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIG 89

Query: 138 VCT-QDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           +    +G  +V++ +  HG+L  F+R  + +                 T KDLISF  QV
Sbjct: 90  IMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN----------------PTVKDLISFGLQV 133

Query: 197 ANGMHYLQSRK 207
           A GM YL  +K
Sbjct: 134 ARGMEYLAEQK 144

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score =  149 bits (378), Expect = 2e-43
 Identities = 63/181 (34%), Positives = 84/181 (46%), Gaps = 50/181 (27%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE++++  IG H+N++NLLG
Sbjct: 34  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 93

Query: 138 VCTQ-DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN-------------- 182
            CT+  GPL VIVEF   GNL  +LR  R         G+ +  G               
Sbjct: 94  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRL 153

Query: 183 -----------------------------------VLTEKDLISFAYQVANGMHYLQSRK 207
                                               LT + LI +++QVA GM +L SRK
Sbjct: 154 DSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 213

Query: 208 V 208
            
Sbjct: 214 C 214

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  146 bits (371), Expect = 8e-43
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 20/132 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FGKV     +          VAVK LK       + DL  E+E+++ +  H NI+   G
Sbjct: 33  HFGKVELCRYDP-EGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKG 90

Query: 138 VCTQDG--PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           +CT+DG   + +I+EF P G+L+++L K++                  +  K  + +A Q
Sbjct: 91  ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----------------INLKQQLKYAVQ 134

Query: 196 VANGMHYLQSRK 207
           +  GM YL SR+
Sbjct: 135 ICKGMDYLGSRQ 146

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  146 bits (371), Expect = 1e-42
 Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 22/132 (16%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FGKV     +     G    VAVK LK             E+++++ +  H +II   G
Sbjct: 43  HFGKVSLYCYDP-TNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKG 100

Query: 138 VCTQDG--PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            C   G   L +++E+ P G+LRD+L +H                   +    L+ FA Q
Sbjct: 101 CCEDAGAASLQLVMEYVPLGSLRDYLPRHS------------------IGLAQLLLFAQQ 142

Query: 196 VANGMHYLQSRK 207
           +  GM YL ++ 
Sbjct: 143 ICEGMAYLHAQH 154

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  144 bits (365), Expect = 9e-42
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 21/132 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V     +  L+      VAVK L+   ++  + D   E+E++K + QH NI+   G
Sbjct: 53  NFGSVEMCRYDP-LQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSL-QHDNIVKYKG 109

Query: 138 VCTQDG--PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           VC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +  Q
Sbjct: 110 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQYTSQ 153

Query: 196 VANGMHYLQSRK 207
           +  GM YL +++
Sbjct: 154 ICKGMEYLGTKR 165

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  142 bits (361), Expect = 2e-41
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 21/132 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V     +  L+      VAVK L+   ++  + D   E+E++K + QH NI+   G
Sbjct: 22  NFGSVEMCRYDP-LQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSL-QHDNIVKYKG 78

Query: 138 VCTQDG--PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           VC   G   L +I+E+ P+G+LRD+L+KH+                  +    L+ +  Q
Sbjct: 79  VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----------------IDHIKLLQYTSQ 122

Query: 196 VANGMHYLQSRK 207
           +  GM YL +++
Sbjct: 123 ICKGMEYLGTKR 134

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  142 bits (360), Expect = 5e-41
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 21/132 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V     +  L       VAVK L+    D +  D   E++++K +     I+   G
Sbjct: 35  NFGSVELCRYDP-LGDNTGALVAVKQLQHSGPDQQR-DFQREIQILKAL-HSDFIVKYRG 91

Query: 138 VCTQDG--PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           V    G   L +++E+ P G LRDFL++HR                  L    L+ ++ Q
Sbjct: 92  VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----------------LDASRLLLYSSQ 135

Query: 196 VANGMHYLQSRK 207
           +  GM YL SR+
Sbjct: 136 ICKGMEYLGSRR 147

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  139 bits (353), Expect = 2e-40
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 23/130 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            +G+V               TVAVK LKE   + E  + + E  +MK I +H N++ LLG
Sbjct: 25  QYGEVYEGVWKKY-----SLTVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLG 76

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCT++ P Y+I EF  +GNL D+LR+                    ++   L+  A Q++
Sbjct: 77  VCTREPPFYIITEFMTYGNLLDYLRECNRQE---------------VSAVVLLYMATQIS 121

Query: 198 NGMHYLQSRK 207
           + M YL+ + 
Sbjct: 122 SAMEYLEKKN 131

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  140 bits (356), Expect = 2e-40
 Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 19/130 (14%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG V         ++  I  VA+K L+E  S     +++ E  +M  +  + ++  LLG
Sbjct: 27  AFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLG 84

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           +C     + +I +  P G L D++R+H+ +                +  + L+++  Q+A
Sbjct: 85  ICLTS-TVQLITQLMPFGCLLDYVREHKDN----------------IGSQYLLNWCVQIA 127

Query: 198 NGMHYLQSRK 207
            GM+YL+ R+
Sbjct: 128 KGMNYLEDRR 137

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  138 bits (350), Expect = 2e-39
 Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 19/130 (14%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V         +   I  V +K++++         +   M  +  +  H +I+ LLG
Sbjct: 25  VFGTVHKGVWIPEGESIKIP-VCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLG 82

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           +C     L ++ ++ P G+L D +R+HR +                L  + L+++  Q+A
Sbjct: 83  LCPGS-SLQLVTQYLPLGSLLDHVRQHRGA----------------LGPQLLLNWGVQIA 125

Query: 198 NGMHYLQSRK 207
            GM+YL+   
Sbjct: 126 KGMYYLEEHG 135

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  136 bits (346), Expect = 3e-39
 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 27/132 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V+  +  G         VAVK +K   +       ++E  +M  + +H N++ LLG
Sbjct: 33  EFGDVMLGDYRG-------NKVAVKCIKNDATAQ---AFLAEASVMTQL-RHSNLVQLLG 81

Query: 138 VCTQDGP-LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           V  ++   LY++ E+   G+L D+LR                   +VL    L+ F+  V
Sbjct: 82  VIVEEKGGLYIVTEYMAKGSLVDYLRSRG---------------RSVLGGDCLLKFSLDV 126

Query: 197 ANGMHYLQSRKV 208
              M YL+    
Sbjct: 127 CEAMEYLEGNNF 138

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  137 bits (346), Expect = 6e-39
 Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 19/130 (14%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG V         ++  I  VA+K L+E  S     +++ E  +M  +  + ++  LLG
Sbjct: 27  AFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLG 84

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           +C     + +I +  P G L D++R+H+ +                +  + L+++  Q+A
Sbjct: 85  ICLTS-TVQLITQLMPFGCLLDYVREHKDN----------------IGSQYLLNWCVQIA 127

Query: 198 NGMHYLQSRK 207
            GM+YL+ R+
Sbjct: 128 KGMNYLEDRR 137

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  139 bits (352), Expect = 2e-38
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 23/130 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            +G+V               TVAVK LKE   + E  + + E  +MK I +H N++ LLG
Sbjct: 232 QYGEVYEGVWKKY-----SLTVAVKTLKEDTMEVE--EFLKEAAVMKEI-KHPNLVQLLG 283

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCT++ P Y+I EF  +GNL D+LR+                    ++   L+  A Q++
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECN---------------RQEVSAVVLLYMATQIS 328

Query: 198 NGMHYLQSRK 207
           + M YL+ + 
Sbjct: 329 SAMEYLEKKN 338

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  130 bits (330), Expect = 5e-37
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 25/130 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V     NG       T VAVK LK+G    +    ++E  +MK + QH  ++ L  
Sbjct: 25  QFGEVWMGYYNGH------TKVAVKSLKQGSMSPD--AFLAEANLMKQL-QHQRLVRLYA 75

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V TQ+ P+Y+I E+  +G+L DFL+                     LT   L+  A Q+A
Sbjct: 76  VVTQE-PIYIITEYMENGSLVDFLKTPSGIK---------------LTINKLLDMAAQIA 119

Query: 198 NGMHYLQSRK 207
            GM +++ R 
Sbjct: 120 EGMAFIEERN 129

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  134 bits (339), Expect = 6e-37
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 27/131 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V+  +  G         VAVK +K   +       ++E  +M  + +H N++ LLG
Sbjct: 205 EFGDVMLGDYRG-------NKVAVKCIKNDATAQ---AFLAEASVMTQL-RHSNLVQLLG 253

Query: 138 VCTQDGP-LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           V  ++   LY++ E+   G+L D+LR                   +VL    L+ F+  V
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSR---------------GRSVLGGDCLLKFSLDV 298

Query: 197 ANGMHYLQSRK 207
              M YL+   
Sbjct: 299 CEAMEYLEGNN 309

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  126 bits (320), Expect = 1e-35
 Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 25/130 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V   +  G         VAVKM+KEG    +  +   E + M  +  H  ++   G
Sbjct: 20  QFGVVKLGKWKGQ------YDVAVKMIKEGSMSED--EFFQEAQTMMKL-SHPKLVKFYG 70

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VC+++ P+Y++ E+  +G L ++LR H                   L    L+   Y V 
Sbjct: 71  VCSKEYPIYIVTEYISNGCLLNYLRSHGKG----------------LEPSQLLEMCYDVC 114

Query: 198 NGMHYLQSRK 207
            GM +L+S +
Sbjct: 115 EGMAFLESHQ 124

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  132 bits (333), Expect = 2e-35
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 20/130 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V       +  +     VA+K  K   SD+     + E   M+    H +I+ L+G
Sbjct: 402 QFGDVHQGIY--MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIG 458

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V T++ P+++I+E    G LR FL+  + S                L    LI +AYQ++
Sbjct: 459 VITEN-PVWIIMELCTLGELRSFLQVRKFS----------------LDLASLILYAYQLS 501

Query: 198 NGMHYLQSRK 207
             + YL+S++
Sbjct: 502 TALAYLESKR 511

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  125 bits (317), Expect = 5e-35
 Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 30/166 (18%)

Query: 78  AFGKVICAEANGILKQGII--TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            F K+       +   G +  T V +K+L + H +           MM  +  H +++  
Sbjct: 20  TFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSE-SFFEAASMMSKL-SHKHLVLN 77

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            GVC       ++ EF   G+L  +L+K++                  +     +  A Q
Sbjct: 78  YGVCVCGDENILVQEFVKFGSLDTYLKKNKNC----------------INILWKLEVAKQ 121

Query: 196 VANGMHYLQSRKVGNDAVRFIGFDLC---ILVFFHDSTLLKTTSTI 238
           +A  MH+L+           I  ++C   IL+   +         I
Sbjct: 122 LAAAMHFLEENT-------LIHGNVCAKNILLIREEDRKTGNPPFI 160

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  125 bits (315), Expect = 1e-34
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 20/130 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V          +     VA+K  K   SD+     + E   M+    H +I+ L+G
Sbjct: 27  QFGDVHQGIYMS--PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIG 83

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V T++ P+++I+E    G LR FL+  + S                L    LI +AYQ++
Sbjct: 84  VITEN-PVWIIMELCTLGELRSFLQVRKYS----------------LDLASLILYAYQLS 126

Query: 198 NGMHYLQSRK 207
             + YL+S++
Sbjct: 127 TALAYLESKR 136

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  124 bits (313), Expect = 1e-34
 Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 25/130 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V                VA+K ++EG    E  D + E E+M  +  H  ++ L G
Sbjct: 20  QFGLVHLGYWLNK------DKVAIKTIREGAMSEE--DFIEEAEVMMKL-SHPKLVQLYG 70

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VC +  P+ ++ EF  HG L D+LR  R                     + L+     V 
Sbjct: 71  VCLEQAPICLVTEFMEHGCLSDYLRTQRGL----------------FAAETLLGMCLDVC 114

Query: 198 NGMHYLQSRK 207
            GM YL+   
Sbjct: 115 EGMAYLEEAC 124

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  123 bits (310), Expect = 5e-34
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 25/130 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V   +  G         VA+KM+KEG    +  + + E ++M  +  H  ++ L G
Sbjct: 36  QFGVVKYGKWRGQ------YDVAIKMIKEGSMSED--EFIEEAKVMMNL-SHEKLVQLYG 86

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCT+  P+++I E+  +G L ++LR+ R                     + L+     V 
Sbjct: 87  VCTKQRPIFIITEYMANGCLLNYLREMRHR----------------FQTQQLLEMCKDVC 130

Query: 198 NGMHYLQSRK 207
             M YL+S++
Sbjct: 131 EAMEYLESKQ 140

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  124 bits (313), Expect = 3e-33
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 25/130 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V  A  N        T VAVK +K G    E    ++E  +MK + QH  ++ L  
Sbjct: 200 QFGEVWMATYNKH------TKVAVKTMKPGSMSVE--AFLAEANVMKTL-QHDKLVKLHA 250

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V T++ P+Y+I EF   G+L DFL+                  G+      LI F+ Q+A
Sbjct: 251 VVTKE-PIYIITEFMAKGSLLDFLKSDE---------------GSKQPLPKLIDFSAQIA 294

Query: 198 NGMHYLQSRK 207
            GM +++ R 
Sbjct: 295 EGMAFIEQRN 304

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  119 bits (301), Expect = 1e-32
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 20/130 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V          +G    VAVK  K+  +       +SE  +MK +  H +I+ L+G
Sbjct: 24  FFGEVYEGVYTN--HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIG 80

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           +  ++ P ++I+E  P+G L  +L +++ S                L    L+ ++ Q+ 
Sbjct: 81  IIEEE-PTWIIMELYPYGELGHYLERNKNS----------------LKVLTLVLYSLQIC 123

Query: 198 NGMHYLQSRK 207
             M YL+S  
Sbjct: 124 KAMAYLESIN 133

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  123 bits (309), Expect = 2e-32
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 25/130 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  
Sbjct: 279 CFGEVWMGTWNGT------TRVAIKTLKPGTMSPE--AFLQEAQVMKKL-RHEKLVQLYA 329

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A
Sbjct: 330 VVSEE-PIYIVTEYMSKGSLLDFLKGET---------------GKYLRLPQLVDMAAQIA 373

Query: 198 NGMHYLQSRK 207
           +GM Y++   
Sbjct: 374 SGMAYVERMN 383

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  119 bits (300), Expect = 3e-32
 Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 19/130 (14%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
             G+V         ++ +   VA+K LK G+++ +  D +SE  +M     H NII L G
Sbjct: 61  DSGEVCYGRLRVPGQRDV--PVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEG 117

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V T+     ++ E+  +G+L  FLR H                    T   L+     V 
Sbjct: 118 VVTRGRLAMIVTEYMENGSLDTFLRTHDGQ----------------FTIMQLVGMLRGVG 161

Query: 198 NGMHYLQSRK 207
            GM YL    
Sbjct: 162 AGMRYLSDLG 171

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  120 bits (303), Expect = 7e-32
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 25/130 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V     NG       T VA+K LK G    E    + E ++MK + +H  ++ L  
Sbjct: 196 CFGEVWMGTWNGT------TRVAIKTLKPGTMSPE--AFLQEAQVMKKL-RHEKLVQLYA 246

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V +++ P+Y++ E+   G+L DFL+                  G  L    L+  A Q+A
Sbjct: 247 VVSEE-PIYIVTEYMSKGSLLDFLKGET---------------GKYLRLPQLVDMAAQIA 290

Query: 198 NGMHYLQSRK 207
           +GM Y++   
Sbjct: 291 SGMAYVERMN 300

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  118 bits (297), Expect = 1e-31
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 18/130 (13%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V          +  +  VA+K LK G+++ + +D + E  +M     H NII L G
Sbjct: 56  EFGEVYKGMLKTSSGKKEVP-VAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEG 113

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V ++  P+ +I E+  +G L  FLR+                     +   L+     +A
Sbjct: 114 VISKYKPMMIITEYMENGALDKFLREKDGE----------------FSVLQLVGMLRGIA 157

Query: 198 NGMHYLQSRK 207
            GM YL +  
Sbjct: 158 AGMKYLANMN 167

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  117 bits (296), Expect = 3e-31
 Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 22/131 (16%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V     +G L+    T VAVK  +E          + E  ++K    H NI+ L+G
Sbjct: 126 NFGEVF----SGRLR-ADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIG 179

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VCTQ  P+Y+++E    G+   FLR                     L  K L+      A
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGAR----------------LRVKTLLQMVGDAA 223

Query: 198 NGMHYLQSRKV 208
            GM YL+S+  
Sbjct: 224 AGMEYLESKCC 234

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  117 bits (294), Expect = 6e-31
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 19/130 (14%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V         K+ I  +VA+K LK G+++ +  D + E  +M     H NII L G
Sbjct: 57  EFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEG 113

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V T+  P+ ++ E+  +G+L  FLRKH                    T   L+     +A
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----------------FTVIQLVGMLRGIA 157

Query: 198 NGMHYLQSRK 207
           +GM YL    
Sbjct: 158 SGMKYLSDMG 167

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  113 bits (284), Expect = 3e-30
 Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 23/131 (17%)

Query: 78  AFGKVICAEANGILKQGIITT-VAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
            FG V      G+ +       VA+K+LK+G   A+  +++ E ++M  +  +  I+ L+
Sbjct: 22  NFGSV----RQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLI 76

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           GVC  +  L +++E A  G L  FL   R                  +   ++    +QV
Sbjct: 77  GVCQAE-ALMLVMEMAGGGPLHKFLVGKREE----------------IPVSNVAELLHQV 119

Query: 197 ANGMHYLQSRK 207
           + GM YL+ + 
Sbjct: 120 SMGMKYLEEKN 130

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  111 bits (279), Expect = 2e-29
 Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 23/131 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM-DLVSEMEMMKMIGQHINIINLL 136
            FG V          + ++ TVAVK+LK   +D  +  +L++E  +M+ +  +  I+ ++
Sbjct: 29  NFGTVKKGYYQM---KKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMI 84

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G+C  +    +++E A  G L  +L+++R                  + +K++I   +QV
Sbjct: 85  GICEAE-SWMLVMEMAELGPLNKYLQQNRH-----------------VKDKNIIELVHQV 126

Query: 197 ANGMHYLQSRK 207
           + GM YL+   
Sbjct: 127 SMGMKYLEESN 137

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  109 bits (275), Expect = 8e-29
 Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 22/132 (16%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM--DLVSEMEMMKMIGQHINIINL 135
           +FG V   E +     G   +VAVK LK           D + E+  M  +  H N+I L
Sbjct: 30  SFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRL 86

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            GV     P+ ++ E AP G+L D LRKH+                       L  +A Q
Sbjct: 87  YGVVLTP-PMKMVTELAPLGSLLDRLRKHQGH----------------FLLGTLSRYAVQ 129

Query: 196 VANGMHYLQSRK 207
           VA GM YL+S++
Sbjct: 130 VAEGMGYLESKR 141

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  110 bits (275), Expect = 1e-27
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 23/131 (17%)

Query: 78  AFGKVICAEANGILK-QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
            FG V      G+ + +     VA+K+LK+G   A+  +++ E ++M  +  +  I+ L+
Sbjct: 348 NFGSV----RQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLI 402

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           GVC  +  L +++E A  G L  FL   R                  +   ++    +QV
Sbjct: 403 GVCQAE-ALMLVMEMAGGGPLHKFLVGKREE----------------IPVSNVAELLHQV 445

Query: 197 ANGMHYLQSRK 207
           + GM YL+ + 
Sbjct: 446 SMGMKYLEEKN 456

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 95.1 bits (237), Expect = 3e-23
 Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 25/132 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM-DLVSEMEMMKMIGQHINIINLL 136
            FG+ I        ++   T   + M +    D E     + E+++M+ + +H N++  +
Sbjct: 22  CFGQAI----KVTHRE---TGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFI 73

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           GV  +D  L  I E+   G LR  ++                   +       +SFA  +
Sbjct: 74  GVLYKDKRLNFITEYIKGGTLRGIIKSM----------------DSQYPWSQRVSFAKDI 117

Query: 197 ANGMHYLQSRKV 208
           A+GM YL S  +
Sbjct: 118 ASGMAYLHSMNI 129

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 94.3 bits (235), Expect = 3e-23
 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 33/146 (22%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSD---AEMMDLVSEMEMMKMIGQHINIIN 134
            FGKV  A   G         VAVK  +    +     + ++  E ++  M+ +H NII 
Sbjct: 19  GFGKVYRAFWIG-------DEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIA 70

Query: 135 LLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           L GVC ++  L +++EFA  G L   L   R                  +    L+++A 
Sbjct: 71  LRGVCLKEPNLCLVMEFARGGPLNRVLSGKR------------------IPPDILVNWAV 112

Query: 195 QVANGMHYLQSRKVGNDAVRFIGFDL 220
           Q+A GM+YL    +    V  I  DL
Sbjct: 113 QIARGMNYLHDEAI----VPIIHRDL 134

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 93.9 bits (234), Expect = 6e-23
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 27/132 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM-DLVSEMEMMKMIGQHINIINLL 136
           +FG V   + +G         VAVKML       + +    +E+ +++   +H+NI+  +
Sbjct: 36  SFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFM 86

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G  T    L ++ ++    +L   L                         K LI  A Q 
Sbjct: 87  GYSTAP-QLAIVTQWCEGSSLYHHLHASETK----------------FEMKKLIDIARQT 129

Query: 197 ANGMHYLQSRKV 208
           A GM YL ++ +
Sbjct: 130 ARGMDYLHAKSI 141

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 93.5 bits (233), Expect = 1e-22
 Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 23/131 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM-DLVSEMEMMKMIGQHINIINLL 136
           +FG V  AE +G       + VAVK+L E    AE + + + E+ +MK + +H NI+  +
Sbjct: 49  SFGTVHRAEWHG-------SDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFM 100

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G  TQ   L ++ E+   G+L   L K                    L E+  +S AY V
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGA--------------REQLDERRRLSMAYDV 146

Query: 197 ANGMHYLQSRK 207
           A GM+YL +R 
Sbjct: 147 AKGMNYLHNRN 157

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 92.8 bits (231), Expect = 2e-22
 Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 26/132 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM-DLVSEMEMMKMIGQHINIINLL 136
            FG+V     +G         VA++++     + + +     E+   +   +H N++  +
Sbjct: 45  RFGQVYHGRWHG--------EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFM 95

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G C     L +I        L   +R  +                  L        A ++
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVVRDAKIV----------------LDVNKTRQIAQEI 139

Query: 197 ANGMHYLQSRKV 208
             GM YL ++ +
Sbjct: 140 VKGMGYLHAKGI 151

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 90.9 bits (226), Expect = 1e-21
 Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 27/130 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG V  A+            VA+K ++   S++E    + E+  +  +  H NI+ L G
Sbjct: 20  AFGVVCKAKWRA-------KDVAIKQIE---SESERKAFIVELRQLSRV-NHPNIVKLYG 68

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            C    P+ +++E+A  G+L + L    P                  T    +S+  Q +
Sbjct: 69  ACLN--PVCLVMEYAEGGSLYNVLHGAEPLP--------------YYTAAHAMSWCLQCS 112

Query: 198 NGMHYLQSRK 207
            G+ YL S +
Sbjct: 113 QGVAYLHSMQ 122

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 26/133 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM-DLVSEMEMMKMIGQHINIINLL 136
             G++      G         + VK+LK          D   E   +++   H N++ +L
Sbjct: 22  HSGELWKGRWQG-------NDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVL 73

Query: 137 GVCTQ--DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           G C         +I  + P+G+L + L +                   V+ +   + FA 
Sbjct: 74  GACQSPPAPHPTLITHWMPYGSLYNVLHEGT---------------NFVVDQSQAVKFAL 118

Query: 195 QVANGMHYLQSRK 207
            +A GM +L + +
Sbjct: 119 DMARGMAFLHTLE 131

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 86.2 bits (214), Expect = 4e-20
 Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 34/138 (24%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMM------DLVSEMEMMKMIGQH 129
            FG V       +        + VA+K L  G S+ E        +   E+ +M  +  H
Sbjct: 31  GFGLVHKGRLVKDK-------SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NH 82

Query: 130 INIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL 189
            NI+ L G+     P  +++EF P G+L   L                    + +     
Sbjct: 83  PNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLD----------------KAHPIKWSVK 124

Query: 190 ISFAYQVANGMHYLQSRK 207
           +     +A G+ Y+Q++ 
Sbjct: 125 LRLMLDIALGIEYMQNQN 142

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 76.6 bits (189), Expect = 1e-16
 Identities = 24/144 (16%), Positives = 44/144 (30%), Gaps = 34/144 (23%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG-QHINIINLL 136
            +G+V      G         VAVK+       +       E E+   +  +H NI+  +
Sbjct: 20  RYGEVWRGSWQG-------ENVAVKIFSSRDEKSWFR----ETELYNTVMLRHENILGFI 68

Query: 137 GVCTQDG----PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
                       L++I  +   G+L D+L+                     L     +  
Sbjct: 69  ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT------------------TLDTVSCLRI 110

Query: 193 AYQVANGMHYLQSRKVGNDAVRFI 216
              +A+G+ +L     G      I
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAI 134

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 76.0 bits (187), Expect = 4e-16
 Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 34/138 (24%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG-QHINIINLL 136
            FG+V   +  G         VAVK+       +       E E+ + +  +H NI+  +
Sbjct: 54  RFGEVWRGKWRG-------EEVAVKIFSSREERSWFR----EAEIYQTVMLRHENILGFI 102

Query: 137 GVCTQDG----PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
               +D      L+++ ++  HG+L D+L ++                   +T + +I  
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY------------------TVTVEGMIKL 144

Query: 193 AYQVANGMHYLQSRKVGN 210
           A   A+G+ +L    VG 
Sbjct: 145 ALSTASGLAHLHMEIVGT 162

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 74.4 bits (183), Expect = 1e-15
 Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 34/138 (24%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG-QHINIINLL 136
            +G+V   +  G         VAVK+       +       E E+ + +  +H NI+  +
Sbjct: 49  RYGEVWMGKWRG-------EKVAVKVFFTTEEASWFR----ETEIYQTVLMRHENILGFI 97

Query: 137 GVCTQDGP----LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
               +       LY+I ++  +G+L D+L+                     L  K ++  
Sbjct: 98  AADIKGTGSWTQLYLITDYHENGSLYDYLKST------------------TLDAKSMLKL 139

Query: 193 AYQVANGMHYLQSRKVGN 210
           AY   +G+ +L +     
Sbjct: 140 AYSSVSGLCHLHTEIFST 157

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 70.9 bits (174), Expect = 2e-14
 Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 32/137 (23%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FG V  A+            VAVK+       +   +   E+  +  + +H NI+  +G 
Sbjct: 37  FGCVWKAQLLN-------EYVAVKIFPIQDKQSWQNEY--EVYSLPGM-KHENILQFIGA 86

Query: 139 CTQD----GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
             +       L++I  F   G+L DFL+ +                  V++  +L   A 
Sbjct: 87  EKRGTSVDVDLWLITAFHEKGSLSDFLKAN------------------VVSWNELCHIAE 128

Query: 195 QVANGMHYLQSRKVGND 211
            +A G+ YL     G  
Sbjct: 129 TMARGLAYLHEDIPGLK 145

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 70.1 bits (172), Expect = 4e-14
 Identities = 19/151 (12%), Positives = 50/151 (33%), Gaps = 30/151 (19%)

Query: 64  TVTINSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVS 118
            +++  + Y  +K        KV         ++      A+K +  E   +  +    +
Sbjct: 3   CISVKGRIYSILKQIGSGGSSKVFQVLN----EKK--QIYAIKYVNLEEADNQTLDSYRN 56

Query: 119 EMEMMKMI-GQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSA 177
           E+  +  +      II L      D  +Y+++E   + +L  +L+K +            
Sbjct: 57  EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS----------- 104

Query: 178 YTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                 +   +  S+   +   +H +    +
Sbjct: 105 ------IDPWERKSYWKNMLEAVHTIHQHGI 129

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 69.6 bits (171), Expect = 4e-14
 Identities = 19/151 (12%), Positives = 51/151 (33%), Gaps = 30/151 (19%)

Query: 64  TVTINSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVS 118
           ++++  + Y  +K        KV         ++      A+K +  E   +  +    +
Sbjct: 22  SMSVKGRIYSILKQIGSGGSSKVFQVLN----EKK--QIYAIKYVNLEEADNQTLDSYRN 75

Query: 119 EMEMMKMI-GQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSA 177
           E+  +  +      II L      D  +Y+++E   + +L  +L+K +            
Sbjct: 76  EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS----------- 123

Query: 178 YTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                 +   +  S+   +   +H +    +
Sbjct: 124 ------IDPWERKSYWKNMLEAVHTIHQHGI 148

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 30/167 (17%)

Query: 48  NIATSVHDKVSLINVLTVTINSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKM 103
           ++ T   DK S      +++  + Y  +K        KV         ++      A+K 
Sbjct: 34  DLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLN----EKK--QIYAIKY 87

Query: 104 L-KEGHSDAEMMDLVSEMEMMKMI-GQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFL 161
           +  E   +  +    +E+  +  +      II L      D  +Y+++E   + +L  +L
Sbjct: 88  VNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWL 146

Query: 162 RKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           +K +                  +   +  S+   +   +H +    +
Sbjct: 147 KKKKS-----------------IDPWERKSYWKNMLEAVHTIHQHGI 176

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 65.9 bits (161), Expect = 7e-13
 Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 30/151 (19%)

Query: 66  TINSQEYVKIKC----AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSE 119
           + ++  ++        A   V        G          A+K+         +   + E
Sbjct: 5   STSNHLWLLSDILGQGATANVFRGRHKKTG-------DLFAIKVFNNISFLRPVDVQMRE 57

Query: 120 MEMMKMIGQHINIINLLGV--CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSA 177
            E++K +  H NI+ L  +   T      +I+EF P G+L   L +              
Sbjct: 58  FEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPS------------ 104

Query: 178 YTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
             N   L E + +     V  GM++L+   +
Sbjct: 105 --NAYGLPESEFLIVLRDVVGGMNHLRENGI 133

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 66.3 bits (162), Expect = 8e-13
 Identities = 24/146 (16%), Positives = 60/146 (41%), Gaps = 30/146 (20%)

Query: 70  QEYVKIKC----AFGKVICAE--ANGILKQGIITTVAVKMLK-EGHSDAEMMDLVSEMEM 122
           ++YV+++     +FGK I  +   +G           +K +     S  E  +   E+ +
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDG-------RQYVIKEINISRMSSKEREESRREVAV 76

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           +  + +H NI+       ++G LY+++++   G+L   +   +               G 
Sbjct: 77  LANM-KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQK---------------GV 120

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
           +  E  ++ +  Q+   + ++  RK+
Sbjct: 121 LFQEDQILDWFVQICLALKHVHDRKI 146

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 64.9 bits (158), Expect = 3e-12
 Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 30/151 (19%)

Query: 66  TINSQEYVKIKC----AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSE 119
           + ++  ++        A   V        G          A+K+         +   + E
Sbjct: 5   STSNHLWLLSDILGQGATANVFRGRHKKTG-------DLFAIKVFNNISFLRPVDVQMRE 57

Query: 120 MEMMKMIGQHINIINLLGV--CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSA 177
            E++K +  H NI+ L  +   T      +I+EF P G+L   L +              
Sbjct: 58  FEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP------------- 103

Query: 178 YTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            +N   L E + +     V  GM++L+   +
Sbjct: 104 -SNAYGLPESEFLIVLRDVVGGMNHLRENGI 133

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 64.5 bits (157), Expect = 3e-12
 Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 35/132 (26%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG-QHINIINLL 136
            +G V     +          VAVK+    +      + ++E  + ++   +H NI   +
Sbjct: 25  RYGAVYKGSLDE-------RPVAVKVFSFANRQ----NFINEKNIYRVPLMEHDNIARFI 73

Query: 137 GVCTQDG-----PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLIS 191
               +          +++E+ P+G+L  +L  H                           
Sbjct: 74  VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT------------------SDWVSSCR 115

Query: 192 FAYQVANGMHYL 203
            A+ V  G+ YL
Sbjct: 116 LAHSVTRGLAYL 127

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 63.5 bits (155), Expect = 4e-12
 Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 32/137 (23%)

Query: 78  AFGKVICA--EANGILKQGIITTVAVK-MLKEGHSDAEMMDLVSEMEMMKMIGQHINIIN 134
           +F  V         +        VA   +     + +E      E EM+K + QH NI+ 
Sbjct: 38  SFKTVYKGLDTETTVE-------VAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVR 89

Query: 135 LLG----VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLI 190
                         + ++ E    G L+ +L++ +                  +  K L 
Sbjct: 90  FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV-----------------MKIKVLR 132

Query: 191 SFAYQVANGMHYLQSRK 207
           S+  Q+  G+ +L +R 
Sbjct: 133 SWCRQILKGLQFLHTRT 149

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 63.5 bits (155), Expect = 5e-12
 Identities = 25/147 (17%), Positives = 54/147 (36%), Gaps = 27/147 (18%)

Query: 69  SQEYVKIKC----AFGKVICAE--ANGILKQGIITTVAVKMLK-EGHSDAEMMDLVSEME 121
           + E+ +++      FG V       +G +        A+K  K       +  + + E+ 
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCI-------YAIKRSKKPLAGSVDEQNALREVY 62

Query: 122 MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNG 181
              ++GQH +++       +D  + +  E+   G+L D + ++     Y           
Sbjct: 63  AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY----------- 111

Query: 182 NVLTEKDLISFAYQVANGMHYLQSRKV 208
               E +L     QV  G+ Y+ S  +
Sbjct: 112 --FKEAELKDLLLQVGRGLRYIHSMSL 136

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 63.1 bits (154), Expect = 8e-12
 Identities = 29/156 (18%), Positives = 60/156 (38%), Gaps = 34/156 (21%)

Query: 64  TVTINSQEYVKIKC----AFGKVICAE--ANGILKQGIITTVAVK-MLKEGHSDAEMMDL 116
            V I+++ Y+ I+      F  V   E   +G          A+K +L     D E  + 
Sbjct: 23  MVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDG-------HFYALKRILCHEQQDRE--EA 73

Query: 117 VSEMEMMKMIGQHINIINLLGVCTQDGP----LYVIVEFAPHGNLRDFLRKHRPSSGYES 172
             E +M ++   H NI+ L+  C ++       ++++ F   G L + + + +       
Sbjct: 74  QREADMHRLFN-HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLK------- 125

Query: 173 PLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                   GN LTE  ++     +  G+  + ++  
Sbjct: 126 ------DKGNFLTEDQILWLLLGICRGLEAIHAKGY 155

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 62.6 bits (153), Expect = 8e-12
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 25/135 (18%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMD-LVSEMEMMKMIGQHINII 133
           K  FG V  A      +   I  +A+K+L K     A +   L  E+E+   + +H NI+
Sbjct: 19  KGKFGNVYLARE---KQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNIL 72

Query: 134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
            L G       +Y+I+E+AP G +   L+K                      E+   ++ 
Sbjct: 73  RLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----------------FDEQRTATYI 115

Query: 194 YQVANGMHYLQSRKV 208
            ++AN + Y  S++V
Sbjct: 116 TELANALSYCHSKRV 130

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 63.2 bits (154), Expect = 9e-12
 Identities = 20/146 (13%), Positives = 45/146 (30%), Gaps = 33/146 (22%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLK---------------EGHSDAEMMDLVS-EME 121
            F K+I  E +           A+K  +               +  S     D    E++
Sbjct: 43  KFNKIILCEKDN-------KFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ 95

Query: 122 MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNG 181
           ++  I ++   +   G+ T    +Y+I E+  + ++  F           +         
Sbjct: 96  IITDI-KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF------- 147

Query: 182 NVLTEKDLISFAYQVANGMHYLQSRK 207
             +  + +      V N   Y+ + K
Sbjct: 148 --IPIQVIKCIIKSVLNSFSYIHNEK 171

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 63.5 bits (154), Expect = 1e-11
 Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 30/139 (21%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            FG V+       G         VA+K  ++  S         E+++MK +  H N+++ 
Sbjct: 26  GFGYVLRWIHQDTG-------EQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSA 77

Query: 136 LGV------CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL 189
             V         +    + +E+   G+LR +L +                N   L E  +
Sbjct: 78  REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE--------------NCCGLKEGPI 123

Query: 190 ISFAYQVANGMHYLQSRKV 208
            +    +++ + YL   ++
Sbjct: 124 RTLLSDISSALRYLHENRI 142

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 62.3 bits (151), Expect = 2e-11
 Identities = 27/187 (14%), Positives = 57/187 (30%), Gaps = 22/187 (11%)

Query: 30  PSDLSTAAVLLPNLFWAFNIATSVHDKVSLINVL----TVTINSQEYVKIKC----AFGK 81
           P D      LL  L    +   +  +    +  +       + S+           AF +
Sbjct: 21  PWDDKLIFKLLSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQ 80

Query: 82  VICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ 141
           V  A    +          +K+ K  +   E       ME +K   QH   +        
Sbjct: 81  VYEATQGDLNDAKNKQKFVLKVQKPANPW-EFYIGTQLMERLKPSMQH-MFMKFYSAHLF 138

Query: 142 DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMH 201
                ++ E   +G L + +  ++             T   V+ +  +ISFA ++   + 
Sbjct: 139 QNGSVLVGELYSYGTLLNAINLYK------------NTPEKVMPQGLVISFAMRMLYMIE 186

Query: 202 YLQSRKV 208
            +   ++
Sbjct: 187 QVHDCEI 193

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 30/153 (19%)

Query: 70  QEYVKIKC----AFGKVICAE--ANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEM 122
           ++Y  +      ++G+       ++G +       +  K L     ++AE   LVSE+ +
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKI-------LVWKELDYGSMTEAEKQMLVSEVNL 58

Query: 123 MKMIGQHINIINLLG--VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTN 180
           ++ + +H NI+      +   +  LY+++E+   G+L   + K                 
Sbjct: 59  LREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT-------------KE 104

Query: 181 GNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV 213
              L E+ ++    Q+   +     R  G   V
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV 137

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 59.9 bits (146), Expect = 9e-11
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 25/135 (18%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMD-LVSEMEMMKMIGQHINII 133
           K  FG V  A      +   I  +A+K+L K       +   L  E+E+   + +H NI+
Sbjct: 24  KGKFGNVYLARE---KQNKFI--MALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNIL 77

Query: 134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
            +         +Y+++EFAP G L   L+KH                     E+   +F 
Sbjct: 78  RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----------------FDEQRSATFM 120

Query: 194 YQVANGMHYLQSRKV 208
            ++A+ +HY   RKV
Sbjct: 121 EELADALHYCHERKV 135

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 24/132 (18%)

Query: 79  FGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMD-LVSEMEMMKMIGQHINIINLL 136
           F  V  AE+   +  G+   VA+KM+ K+    A M+  + +E+++   + +H +I+ L 
Sbjct: 24  FAGVYRAES---IHTGLE--VAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELY 77

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
                   +Y+++E   +G +  +L+                      +E +   F +Q+
Sbjct: 78  NYFEDSNYVYLVLEMCHNGEMNRYLKNR----------------VKPFSENEARHFMHQI 121

Query: 197 ANGMHYLQSRKV 208
             GM YL S  +
Sbjct: 122 ITGMLYLHSHGI 133

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 29/147 (19%)

Query: 70  QEYVKIKC----AFGKVICAE--ANGILKQGIITTVAVK--MLKEGHSDAEMMDLVSEME 121
             +   K      F +V  A    +G         VA+K   + +        D + E++
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDG-------VPVALKKVQIFDLMDAKARADCIKEID 84

Query: 122 MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNG 181
           ++K +  H N+I       +D  L +++E A  G+L   ++  +                
Sbjct: 85  LLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFK-------------KQK 130

Query: 182 NVLTEKDLISFAYQVANGMHYLQSRKV 208
            ++ E+ +  +  Q+ + + ++ SR+V
Sbjct: 131 RLIPERTVWKYFVQLCSALEHMHSRRV 157

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 29/137 (21%)

Query: 76  KCAFGKVICAE--ANGILKQGIITTVAVKML-KEGHSDAEMMD-LVSEMEMMKMIGQHIN 131
           K  F K                    A K++ K         + +  E+ + + +  H +
Sbjct: 51  KGGFAKCFEISDADTK-------EVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQH 102

Query: 132 IINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLIS 191
           ++   G    +  ++V++E     +L +  ++ +                  LTE +   
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-----------------LTEPEARY 145

Query: 192 FAYQVANGMHYLQSRKV 208
           +  Q+  G  YL   +V
Sbjct: 146 YLRQIVLGCQYLHRNRV 162

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 29/137 (21%)

Query: 76  KCAFGKVICAE--ANGILKQGIITTVAVKML-KEGHSDAEMMD-LVSEMEMMKMIGQHIN 131
           K  F K                    A K++ K         + +  E+ + + +  H +
Sbjct: 25  KGGFAKCFEISDADTK-------EVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQH 76

Query: 132 IINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLIS 191
           ++   G    +  ++V++E     +L +  ++ +                  LTE +   
Sbjct: 77  VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-----------------LTEPEARY 119

Query: 192 FAYQVANGMHYLQSRKV 208
           +  Q+  G  YL   +V
Sbjct: 120 YLRQIVLGCQYLHRNRV 136

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 46/159 (28%)

Query: 70  QEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKM 125
            ++ +I+      FG+V  A+ + I  +    T  +K +              E++ +  
Sbjct: 11  MDFKEIELIGSGGFGQVFKAK-HRIDGK----TYVIKRV-----KYNNEKAEREVKALAK 60

Query: 126 IGQHINIINLLG----------------VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSG 169
           +  H+NI++  G                  ++   L++ +EF   G L  ++ K R    
Sbjct: 61  L-DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---- 115

Query: 170 YESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                      G  L +   +    Q+  G+ Y+ S+K+
Sbjct: 116 -----------GEKLDKVLALELFEQITKGVDYIHSKKL 143

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 31/146 (21%)

Query: 70  QEYVKIKC----AFGKVICAE--ANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEM 122
           Q + ++      ++G+V       +G L        AVK          +    ++E+  
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGRL-------YAVKRSMSPFRGPKDRARKLAEVGS 109

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
            + +GQH   + L     + G LY+  E     +L+                      G 
Sbjct: 110 HEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAW----------------GA 152

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
            L E  +  +       + +L S+ +
Sbjct: 153 SLPEAQVWGYLRDTLLALAHLHSQGL 178

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 33/150 (22%)

Query: 64  TVTINSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVK-MLKEGHSDAEMMDLVS 118
            V +    +         A G ++       +       VAVK +L E  S A+      
Sbjct: 18  VVIVGKISFCPKDVLGHGAEGTIVYRG----MFDN--RDVAVKRILPECFSFAD-----R 66

Query: 119 EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAY 178
           E+++++   +H N+I            Y+ +E      L++++ +               
Sbjct: 67  EVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQK-------------- 111

Query: 179 TNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                    + I+   Q  +G+ +L S  +
Sbjct: 112 --DFAHLGLEPITLLQQTTSGLAHLHSLNI 139

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 47/176 (26%)

Query: 78  AFGKVICAEANGILKQG--IIT--TVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINI 132
            F KV         K    I+T   VA+K++ K   +   +  L  E+ +MK++  H NI
Sbjct: 27  NFAKV---------KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNI 76

Query: 133 INLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
           + L  V   +  LY+I+E+A  G + D+L  H                   + EK+  S 
Sbjct: 77  VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-----------------MKEKEARSK 119

Query: 193 AYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDSTLLKTT 235
             Q+ + + Y   +++              +  ++   F       F     L   
Sbjct: 120 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNE--FTVGGKLDAF 173

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 25/133 (18%)

Query: 78  AFGKVICA--EANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
            +G V      +N +        +A+K + E         L  E+ + K + +H NI+  
Sbjct: 34  TYGIVYAGRDLSNQVR-------IAIKEIPE-RDSRYSQPLHEEIALHKHL-KHKNIVQY 84

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
           LG  +++G + + +E  P G+L   LR               YT               Q
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT--------------KQ 130

Query: 196 VANGMHYLQSRKV 208
           +  G+ YL   ++
Sbjct: 131 ILEGLKYLHDNQI 143

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 54.4 bits (131), Expect = 7e-09
 Identities = 24/157 (15%), Positives = 52/157 (33%), Gaps = 35/157 (22%)

Query: 64  TVTINSQEYVKIKC----AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMMDLV 117
           TV +        +      F  V  A+   +G          A+K L   + + +   ++
Sbjct: 22  TVELGELRLRVRRVLAEGGFAFVYEAQDVGSG-------REYALKRLL-SNEEEKNRAII 73

Query: 118 SEMEMMKMIGQHINIINLLGVCTQDGP-------LYVIVEFAPHGNLRDFLRKHRPSSGY 170
            E+  MK +  H NI+      +            ++++     G L +FL+K       
Sbjct: 74  QEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKME----- 128

Query: 171 ESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
                    +   L+   ++   YQ    + ++  +K
Sbjct: 129 ---------SRGPLSCDTVLKIFYQTCRAVQHMHRQK 156

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 33/133 (24%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           +FG+V   +    G          AVK ++      E      E+     +     I+ L
Sbjct: 70  SFGEVHRMKDKQTGFQ-------CAVKKVRLEVFRVE------ELVACAGL-SSPRIVPL 115

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            G   +   + + +E    G+L   +++                    L E   + +  Q
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC-----------------LPEDRALYYLGQ 158

Query: 196 VANGMHYLQSRKV 208
              G+ YL +R++
Sbjct: 159 ALEGLEYLHTRRI 171

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 36/155 (23%)

Query: 70  QEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKM 125
            ++  I+C     FG V  A+ N +         A+K ++  + +     ++ E++ +  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAK-NKVDDC----NYAIKRIRLPNRELAREKVMREVKALAK 59

Query: 126 IGQHINIINLLGVC------------TQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESP 173
           + +H  I+                  +    LY+ ++     NL+D++         E  
Sbjct: 60  L-EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE-- 116

Query: 174 LGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                           +    Q+A  + +L S+ +
Sbjct: 117 ------------RSVCLHIFLQIAEAVEFLHSKGL 139

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 40/175 (22%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVS-EMEMMKMIGQHINII 133
              FGKV   E + +        VAVK+L ++     +++  +  E++ +K+  +H +II
Sbjct: 21  VGTFGKVKIGE-HQLTGH----KVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHII 74

Query: 134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
            L  V +     ++++E+   G L D++ KH                   + E +     
Sbjct: 75  KLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-----------------VEEMEARRLF 117

Query: 194 YQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDSTLLKTT 235
            Q+ + + Y     V              +   +   F L  +    D   L+T+
Sbjct: 118 QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRTS 170

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 52.1 bits (125), Expect = 5e-08
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 23/132 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVK-MLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           + G V+         QG    VAVK ML +    A       E++++     H N+I   
Sbjct: 27  SSGTVVFQG----SFQG--RPVAVKRMLIDFCDIAL-----MEIKLLTESDDHPNVIRYY 75

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
              T D  LY+ +E     NL+D +               +  N  +  E + IS   Q+
Sbjct: 76  CSETTDRFLYIALELCN-LNLQDLVESK----------NVSDENLKLQKEYNPISLLRQI 124

Query: 197 ANGMHYLQSRKV 208
           A+G+ +L S K+
Sbjct: 125 ASGVAHLHSLKI 136

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 51.4 bits (124), Expect = 7e-08
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGV 138
           FGKV      G L  G  T VAVK LKE  +    +   +E+EM+ M   H N++ L G 
Sbjct: 43  FGKVYK----GRLADG--TLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGF 95

Query: 139 CTQDGPLYVIVEFAPHGNLRDFLRKHRPSS 168
           C       ++  +  +G++   LR+   S 
Sbjct: 96  CMTPTERLLVYPYMANGSVASCLRERPESQ 125

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 51.7 bits (124), Expect = 7e-08
 Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 17/114 (14%)

Query: 98  TVAVKMLK-EGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCT--QDGPLYVIVEFAPH 154
             A+K ++  G S +       E+ +++ + +H N+I+L  V     D  ++++ ++A H
Sbjct: 50  DYALKQIEGTGISMSA----CREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAEH 104

Query: 155 GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            +L   ++ HR S   + P+         L    + S  YQ+ +G+HYL +  V
Sbjct: 105 -DLWHIIKFHRASKANKKPV--------QLPRGMVKSLLYQILDGIHYLHANWV 149

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 21/113 (18%)

Query: 98  TVAVKMLKEGHSDAEMMDLVS--EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHG 155
            VA+K   E   D +M+  ++  E++++K + +H N++NLL VC +    Y++ EF  H 
Sbjct: 52  IVAIKKFLESDDD-KMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDH- 108

Query: 156 NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            + D L                    N L  + +  + +Q+ NG+ +  S  +
Sbjct: 109 TILDDLELFP----------------NGLDYQVVQKYLFQIINGIGFCHSHNI 145

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 27/133 (20%)

Query: 78  AFGKV-ICAE-ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG V    E A G          A K +   H   +   +  E++ M ++ +H  ++NL
Sbjct: 169 AFGVVHRVTERATGN-------NFAAKFVMTPHES-DKETVRKEIQTMSVL-RHPTLVNL 219

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
                 D  + +I EF   G L + +                    N ++E + + +  Q
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKVADEH----------------NKMSEDEAVEYMRQ 263

Query: 196 VANGMHYLQSRKV 208
           V  G+ ++     
Sbjct: 264 VCKGLCHMHENNY 276

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 25/135 (18%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVS-EMEMMKMIGQHINII 133
              FGKV   + + +        VAVK+L ++     +++  +  E++ +K+  +H +II
Sbjct: 26  VGTFGKVKVGK-HELTGH----KVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHII 79

Query: 134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
            L  V +    +++++E+   G L D++ K+                   L EK+     
Sbjct: 80  KLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-----------------LDEKESRRLF 122

Query: 194 YQVANGMHYLQSRKV 208
            Q+ +G+ Y     V
Sbjct: 123 QQILSGVDYCHRHMV 137

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 25/150 (16%)

Query: 66  TINSQEYVKIKC----AFGKV---ICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVS 118
           +IN  +Y   +     A   V    CA             VA+K +        M +L+ 
Sbjct: 11  SINRDDYELQEVIGSGATAVVQAAYCAPKK--------EKVAIKRINLEKCQTSMDELLK 62

Query: 119 EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAY 178
           E++ M     H NI++          L+++++    G++ D ++       ++S      
Sbjct: 63  EIQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS------ 115

Query: 179 TNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
               VL E  + +   +V  G+ YL     
Sbjct: 116 ---GVLDESTIATILREVLEGLEYLHKNGQ 142

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 48.7 bits (117), Expect = 5e-07
 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 23/133 (17%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           + A+G+V  A  N + ++     VAVK++    +     ++  E+ + KM+  H N++  
Sbjct: 17  EGAYGEVQLAV-NRVTEE----AVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKF 70

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            G   +    Y+ +E+   G L D +                      + E D   F +Q
Sbjct: 71  YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----------------MPEPDAQRFFHQ 113

Query: 196 VANGMHYLQSRKV 208
           +  G+ YL    +
Sbjct: 114 LMAGVVYLHGIGI 126

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 48.9 bits (117), Expect = 5e-07
 Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 27/135 (20%)

Query: 76  KCAFGKV-ICAE-ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINII 133
             AFG V  C E A G            K +       +   + +E+ +M  +  H  +I
Sbjct: 61  SGAFGVVHRCVEKATGR-------VFVAKFIN-TPYPLDKYTVKNEISIMNQL-HHPKLI 111

Query: 134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
           NL         + +I+EF   G L D +                      ++E ++I++ 
Sbjct: 112 NLHDAFEDKYEMVLILEFLSGGELFDRIAAE----------------DYKMSEAEVINYM 155

Query: 194 YQVANGMHYLQSRKV 208
            Q   G+ ++    +
Sbjct: 156 RQACEGLKHMHEHSI 170

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 99  VAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
            A K L K         +++ E+ ++++      +INL  V      + +I+E+A  G +
Sbjct: 57  YAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEI 116

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                                     ++E D+I    Q+  G++YL    +
Sbjct: 117 FSLCLPELAEM---------------VSENDVIRLIKQILEGVYYLHQNNI 152

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 23/133 (17%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           + A+G+V  A  N + ++     VAVK++    +     ++  E+ + KM+  H N++  
Sbjct: 17  EGAYGEVQLAV-NRVTEE----AVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKF 70

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            G   +    Y+ +E+   G L D +                      + E D   F +Q
Sbjct: 71  YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----------------MPEPDAQRFFHQ 113

Query: 196 VANGMHYLQSRKV 208
           +  G+ YL    +
Sbjct: 114 LMAGVVYLHGIGI 126

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 48.3 bits (116), Expect = 6e-07
 Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 21/113 (18%)

Query: 98  TVAVKMLKEGHSDAEMMDLVS--EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHG 155
            VA+K   E   D  ++  ++  E+ M+K + +H N++NLL V  +   L+++ E+  H 
Sbjct: 30  IVAIKKFLESEDD-PVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLVFEYCDH- 86

Query: 156 NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            +   L ++                   + E  + S  +Q    +++      
Sbjct: 87  TVLHELDRY----------------QRGVPEHLVKSITWQTLQAVNFCHKHNC 123

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 23/133 (17%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG V   E  ++G+          +K + +  S   M  + +E+E++K +  H NII +
Sbjct: 34  AFGDVHLVEERSSGL-------ERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKI 85

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
             V      +Y+++E    G L + +   +                  L+E  +     Q
Sbjct: 86  FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA-------------LSEGYVAELMKQ 132

Query: 196 VANGMHYLQSRKV 208
           + N + Y  S+ V
Sbjct: 133 MMNALAYFHSQHV 145

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
            +  +  +         ++  E+ +++ +  H N+I L  V      + +I+E    G L
Sbjct: 44  FIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGEL 102

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            DFL +                    L+E++  SF  Q+ +G++YL ++K+
Sbjct: 103 FDFLAQK-----------------ESLSEEEATSFIKQILDGVNYLHTKKI 136

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 23/158 (14%), Positives = 61/158 (38%), Gaps = 43/158 (27%)

Query: 69  SQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMK 124
           + ++ +I      AFG+V+ A  N +  +      A+K ++  H++ ++  ++SE+ ++ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKAR-NALDSR----YYAIKKIR--HTEEKLSTILSEVMLLA 57

Query: 125 MIGQHINIINLLGV-------------CTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYE 171
            +  H  ++                    +   L++ +E+  +G L D +          
Sbjct: 58  SL-NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE------- 109

Query: 172 SPLGSAYTNGNVLTEKDLI-SFAYQVANGMHYLQSRKV 208
                     N+  ++D       Q+   + Y+ S+ +
Sbjct: 110 ----------NLNQQRDEYWRLFRQILEALSYIHSQGI 137

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
            +  +  +         ++  E+ +++ +  H NII L  V      + +I+E    G L
Sbjct: 44  FIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRTDVVLILELVSGGEL 102

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            DFL +                    L+E++  SF  Q+ +G++YL ++K+
Sbjct: 103 FDFLAQK-----------------ESLSEEEATSFIKQILDGVNYLHTKKI 136

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 19/111 (17%)

Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
           T   K +K   +D     +  E+ ++ +   H NI++L         L +I EF    ++
Sbjct: 32  TYMAKFVKVKGTDQV--LVKKEISILNIAR-HRNILHLHESFESMEELVMIFEFISGLDI 88

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            + +                      L E++++S+ +QV   + +L S  +
Sbjct: 89  FERINTS----------------AFELNEREIVSYVHQVCEALQFLHSHNI 123

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 26/135 (19%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVS-EMEMMKMIGQHINII 133
           + +FGKV  A  +   +Q     VA+K + ++    ++M   V  E+  +K++ +H +II
Sbjct: 19  EGSFGKVKLAT-HYKTQQ----KVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHII 72

Query: 134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
            L  V T    + +++E+A  G L D++ + +                  +TE +   F 
Sbjct: 73  KLYDVITTPTDIVMVIEYA-GGELFDYIVEKKR-----------------MTEDEGRRFF 114

Query: 194 YQVANGMHYLQSRKV 208
            Q+   + Y    K+
Sbjct: 115 QQIICAIEYCHRHKI 129

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 35/138 (25%), Positives = 52/138 (37%), Gaps = 32/138 (23%)

Query: 78  AFGKV-ICAE-ANGILKQGIITTVAVKM-----LKEGHSDAEMMDLVSEMEMMKMIGQHI 130
            F  V  C E + G          A K       K         D+  E+ ++K I QH 
Sbjct: 23  QFAVVKKCREKSTG-------LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHP 74

Query: 131 NIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLI 190
           N+I L  V      + +I+E    G L DFL +                    LTE++  
Sbjct: 75  NVITLHEVYENKTDVILILELVAGGELFDFLAEK-----------------ESLTEEEAT 117

Query: 191 SFAYQVANGMHYLQSRKV 208
            F  Q+ NG++YL S ++
Sbjct: 118 EFLKQILNGVYYLHSLQI 135

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 15/98 (15%)

Query: 79  FGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLL 136
           FGKV      G+L+ G    VA+K      S    E     +E+E +    +H ++++L+
Sbjct: 52  FGKVY----KGVLRDG--AKVALKRRTPESSQGIEE---FETEIETLSFC-RHPHLVSLI 101

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPL 174
           G C +   + +I ++  +GNL+  L     S      +
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYG---SDLPTMSM 136

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 45.5 bits (108), Expect = 7e-06
 Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 50/181 (27%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVK------MLKEGHSDAEMMDLVS-EMEMMKMIGQ 128
           AFG V  A               V VK      +L++   +   +  V+ E+ ++  + +
Sbjct: 36  AFGFVWTAVDKEKN-------KEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-E 87

Query: 129 HINIINLLGVCTQDGPLYVIVEFAPHGN-LRDFLRKHRPSSGYESPLGSAYTNGNVLTEK 187
           H NII +L +    G   +++E    G  L  F+ +H                   L E 
Sbjct: 88  HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH----------------PR-LDEP 130

Query: 188 DLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDSTLLKT 234
                  Q+ + + YL+ + +              +  ++ I F      +     L  T
Sbjct: 131 LASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA--AYLERGKLFYT 188

Query: 235 T 235
            
Sbjct: 189 F 189

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 45.7 bits (108), Expect = 7e-06
 Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 17/113 (15%)

Query: 97  TTVAVKMLK-EGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHG 155
             V V+ +  E  S+  +  L  E+ + K+   H NI+        D  L+V+  F  +G
Sbjct: 53  EYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFMAYG 111

Query: 156 NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           + +D +  H                 + + E  +      V   + Y+     
Sbjct: 112 SAKDLICTHFM---------------DGMNELAIAYILQGVLKALDYIHHMGY 149

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 39/144 (27%)

Query: 78  AFGKVICAEANGILKQGI-ITT---VAVKM-----LKEGHSDAEMMDLVSEMEMMKMI-- 126
            FG V           G  +T    VA+K+     +      ++ +    E+ ++  +  
Sbjct: 43  GFGTV---------FAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93

Query: 127 -GQHINIINLLGVCTQDGPLYVIVEFAPHGN-LRDFLRKHRPSSGYESPLGSAYTNGNVL 184
            G H  +I LL          +++E       L D++ +  P                 L
Sbjct: 94  GGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP-----------------L 136

Query: 185 TEKDLISFAYQVANGMHYLQSRKV 208
            E     F  QV   + +  SR V
Sbjct: 137 GEGPSRCFFGQVVAAIQHCHSRGV 160

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 44.9 bits (107), Expect = 9e-06
 Identities = 16/116 (13%), Positives = 35/116 (30%), Gaps = 21/116 (18%)

Query: 95  IITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPH 154
           II                    + E+++++ +  H NII L      +   +++ +    
Sbjct: 49  IIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK 108

Query: 155 GNLRDFL--RKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           G L D+L  +                     L+EK+       +   +  L    +
Sbjct: 109 GELFDYLTEKVT-------------------LSEKETRKIMRALLEVICALHKLNI 145

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 44.9 bits (107), Expect = 9e-06
 Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 19/90 (21%)

Query: 119 EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAY 178
           E+ ++K + QH NII L  V   +  L++I E+A + +L+ ++ K+              
Sbjct: 83  EVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPD------------ 128

Query: 179 TNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                ++ + + SF YQ+ NG+++  SR+ 
Sbjct: 129 -----VSMRVIKSFLYQLINGVNFCHSRRC 153

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 45.3 bits (108), Expect = 9e-06
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 22/114 (19%)

Query: 99  VAVKMLKEGHSDAEM----MDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPH 154
           VA+K +K GH            + E+++++ +  H NII LL        + ++ +F   
Sbjct: 38  VAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFDFMET 96

Query: 155 GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            +L   ++                 N  VLT   + ++      G+ YL    +
Sbjct: 97  -DLEVIIK----------------DNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 133

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 23/115 (20%)

Query: 99  VAVKM-----LKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAP 153
            A K      L          ++  E+ +++ I +H NII L  +      + +I+E   
Sbjct: 33  YAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVS 91

Query: 154 HGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            G L DFL +                    LTE +   F  Q+ +G+HYL S+++
Sbjct: 92  GGELFDFLAEK-----------------ESLTEDEATQFLKQILDGVHYLHSKRI 129

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 23/140 (16%), Positives = 47/140 (33%), Gaps = 35/140 (25%)

Query: 78  AFGKV-ICAE-ANGILKQGIITTVAVKML-------KEGHSDAEMMDLVSEMEMMKMIGQ 128
           A G+V +  E             VA++++                +++ +E+E++K +  
Sbjct: 147 ACGEVKLAFERKTCK-------KVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-N 198

Query: 129 HINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKD 188
           H  II +          Y+++E    G L D +  +                   L E  
Sbjct: 199 HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGN-----------------KRLKEAT 240

Query: 189 LISFAYQVANGMHYLQSRKV 208
              + YQ+   + YL    +
Sbjct: 241 CKLYFYQMLLAVQYLHENGI 260

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 28/119 (23%)

Query: 99  VAVKM-------LKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF 151
            AVK+       L     +        E  +++ +  H +II L+        ++++ + 
Sbjct: 122 FAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDL 181

Query: 152 APHGNLRDFL--RKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              G L D+L  +                     L+EK+  S    +   + +L +  +
Sbjct: 182 MRKGELFDYLTEKVA-------------------LSEKETRSIMRSLLEAVSFLHANNI 221

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 37/142 (26%)

Query: 78  AFGKVICAEANGILKQGI-ITT---VAVKM-----LKEGHSDAEMMDLVSEMEMMKMIG- 127
            FG V           GI ++    VA+K      + +         +  E+ ++K +  
Sbjct: 55  GFGSV---------YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 105

Query: 128 QHINIINLLGVCTQDGPLYVIVEFA-PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTE 186
               +I LL    +     +I+E   P  +L DF+ +                    L E
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-----------------LQE 148

Query: 187 KDLISFAYQVANGMHYLQSRKV 208
           +   SF +QV   + +  +  V
Sbjct: 149 ELARSFFWQVLEAVRHCHNCGV 170

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 31/135 (22%)

Query: 78  AFGKV-ICAE-ANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIIN 134
            FG+V  C E A G+        +A K++   G  D E  ++ +E+ +M  +  H N+I 
Sbjct: 101 RFGQVHKCEETATGL-------KLAAKIIKTRGMKDKE--EVKNEISVMNQL-DHANLIQ 150

Query: 135 LLGVCTQDGPLYVIVEFAPHGNLRD-FLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
           L         + +++E+   G L D  + +                    LTE D I F 
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDE-----------------SYNLTELDTILFM 193

Query: 194 YQVANGMHYLQSRKV 208
            Q+  G+ ++    +
Sbjct: 194 KQICEGIRHMHQMYI 208

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 13/90 (14%)

Query: 119 EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAY 178
           E+ +MK + +H NI+ L  V   +  L ++ EF  + +L+ ++      +          
Sbjct: 53  EISLMKEL-KHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGN---------- 100

Query: 179 TNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                L    +  F +Q+  G+ +    K+
Sbjct: 101 -TPRGLELNLVKYFQWQLLQGLAFCHENKI 129

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 28/134 (20%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIIN 134
           A+G+V+        +         A+K++ K   S +    L+ E+ ++K++  H NI+ 
Sbjct: 49  AYGEVLLCRDKVTHV-------ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD-HPNIMK 100

Query: 135 LLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           L          Y+++E    G L D +                        E D      
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHR-----------------MKFNEVDAAVIIK 143

Query: 195 QVANGMHYLQSRKV 208
           QV +G+ YL    +
Sbjct: 144 QVLSGVTYLHKHNI 157

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 25/133 (18%)

Query: 76  KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
              FG       + + K+     VAVK ++ G +  E   +  E+   + + +H NI+  
Sbjct: 30  SGNFGVARLMR-DKLTKE----LVAVKYIERGAAIDEN--VQREIINHRSL-RHPNIVRF 81

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
             V      L +I+E+A  G L + +                       +E +   F  Q
Sbjct: 82  KEVILTPTHLAIIMEYASGGELYERICNAGR-----------------FSEDEARFFFQQ 124

Query: 196 VANGMHYLQSRKV 208
           + +G+ Y  S ++
Sbjct: 125 LLSGVSYCHSMQI 137

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 16/90 (17%), Positives = 39/90 (43%), Gaps = 18/90 (20%)

Query: 119 EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAY 178
           E+ ++K +  H NI++L+ V   +  L ++ EF    +L+  L +++             
Sbjct: 69  EISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENK------------- 113

Query: 179 TNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                L +  +  + YQ+  G+ +    ++
Sbjct: 114 ---TGLQDSQIKIYLYQLLRGVAHCHQHRI 140

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 37/160 (23%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKMLK----EGHSDAEMMDLVSEMEMMKMIGQHIN 131
           ++G V  A       +        A+K++        +  ++  + +E+ +MK +  H N
Sbjct: 38  SYGVVRVAIENQTRAI-------RAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPN 89

Query: 132 IINLLGVCTQDGPLYVIVEFAPHGNLRDFLRK-----------------------HRPSS 168
           I  L  V   +  + +++E    G+L D L                             +
Sbjct: 90  IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149

Query: 169 GYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              S  G   +   V  EK + +   Q+ + +HYL ++ +
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGI 189

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 29/140 (20%)

Query: 78  AFGKVICAE--ANG-------ILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ 128
           A+G+V+  +            I K            K      E  ++ +E+ ++K +  
Sbjct: 48  AYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE--EIYNEISLLKSLD- 104

Query: 129 HINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKD 188
           H NII L  V       Y++ EF   G L + +                    +   E D
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-----------------HKFDECD 147

Query: 189 LISFAYQVANGMHYLQSRKV 208
             +   Q+ +G+ YL    +
Sbjct: 148 AANIMKQILSGICYLHKHNI 167

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 42.5 bits (101), Expect = 6e-05
 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 18/90 (20%)

Query: 119 EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAY 178
           E+ ++K + +H NI+ L  V   D  L ++ EF    +L+ +                  
Sbjct: 51  EICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSC-------------- 94

Query: 179 TNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                L  + + SF +Q+  G+ +  SR V
Sbjct: 95  --NGDLDPEIVKSFLFQLLKGLGFCHSRNV 122

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 34/147 (23%)

Query: 69  SQEYVKIKC----AFGKV---ICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEME 121
            + + K++     +FG+V   I               VA+K++    ++ E+ D+  E+ 
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQ--------KVVAIKIIDLEEAEDEIEDIQQEIT 72

Query: 122 MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNG 181
           ++        +    G   +D  L++I+E+   G+  D L                    
Sbjct: 73  VLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP------------------ 113

Query: 182 NVLTEKDLISFAYQVANGMHYLQSRKV 208
             L E  + +   ++  G+ YL S K 
Sbjct: 114 GPLDETQIATILREILKGLDYLHSEKK 140

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 42.1 bits (100), Expect = 8e-05
 Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 20/113 (17%)

Query: 98  TVAVKMLKEGHSDAEMMDLVS--EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHG 155
            VA+K ++      E +   +  E+ ++K +  H NI+ LL V   +  LY++ EF    
Sbjct: 30  VVALKKIRLDTET-EGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQ- 86

Query: 156 NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
           +L+ F+     +                +    + S+ +Q+  G+ +  S +V
Sbjct: 87  DLKKFMDASALTG---------------IPLPLIKSYLFQLLQGLAFCHSHRV 124

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 42.1 bits (100), Expect = 8e-05
 Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 18/90 (20%)

Query: 119 EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAY 178
           E+ ++K + +H NI+ L  V      L ++ E     +L+  L                 
Sbjct: 50  EISILKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCE------------- 94

Query: 179 TNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                L      SF  Q+ NG+ Y   R+V
Sbjct: 95  ---GGLESVTAKSFLLQLLNGIAYCHDRRV 121

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 18/114 (15%)

Query: 99  VAVKMLK----EGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPH 154
            AVK++              DL  E  +  M+  H +I+ LL   + DG LY++ EF   
Sbjct: 52  FAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDG 110

Query: 155 GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            +L   + K                 G V +E     +  Q+   + Y     +
Sbjct: 111 ADLCFEIVKRA-------------DAGFVYSEAVASHYMRQILEALRYCHDNNI 151

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 23/113 (20%)

Query: 99  VAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
            A K++  +  S  +   L  E  + + + QH NI+ L     ++   Y++ +    G L
Sbjct: 34  FAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92

Query: 158 RDFL--RKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            + +  R+                     +E D      Q+   + Y  S  +
Sbjct: 93  FEDIVAREF-------------------YSEADASHCIQQILESIAYCHSNGI 126

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 28/134 (20%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIIN 134
           +FG+V+  +               AVK++ K    + +   ++ E+E++K +  H NI+ 
Sbjct: 34  SFGEVLKCKDRITQQ-------EYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMK 85

Query: 135 LLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           L  +       Y++ E    G L D + K                     +E D      
Sbjct: 86  LFEILEDSSSFYIVGELYTGGELFDEIIKR-----------------KRFSEHDAARIIK 128

Query: 195 QVANGMHYLQSRKV 208
           QV +G+ Y+    +
Sbjct: 129 QVFSGITYMHKHNI 142

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 19/111 (17%)

Query: 99  VAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNL 157
            A K++  +  S  +   L  E  + + + QH NI+ L     ++   Y++ +    G L
Sbjct: 57  FAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115

Query: 158 RDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
            + +                       +E D      Q+   + Y  S  +
Sbjct: 116 FEDIVAR-----------------EFYSEADASHCIQQILESIAYCHSNGI 149

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 18/90 (20%)

Query: 119 EMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAY 178
           E+ ++K + +H NI+ L  +   +  L ++ E+    +L+ +L                 
Sbjct: 50  EVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDC-------------- 93

Query: 179 TNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
             GN++   ++  F +Q+  G+ Y   +KV
Sbjct: 94  --GNIINMHNVKLFLFQLLRGLAYCHRQKV 121

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 18/111 (16%)

Query: 97  TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGN 156
             +A K++      A    ++ E++++        I+   G    DG + + +E    G+
Sbjct: 59  LVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGGS 117

Query: 157 LRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK 207
           L   L+K                    + E+ L   +  V  G+ YL+ + 
Sbjct: 118 LDQVLKKAGR-----------------IPEQILGKVSIAVIKGLTYLREKH 151

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 25/118 (21%)

Query: 98  TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG------VCTQDGPLYVIVEF 151
             A+K++     + E  ++  E+ M+K    H NI    G          D  L++++EF
Sbjct: 51  LAAIKVMDVTGDEEE--EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108

Query: 152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF-AYQVANGMHYLQSRKV 208
              G++ D ++  +               GN L E + I++   ++  G+ +L   KV
Sbjct: 109 CGAGSVTDLIKNTK---------------GNTLKE-EWIAYICREILRGLSHLHQHKV 150

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 27/163 (16%), Positives = 60/163 (36%), Gaps = 25/163 (15%)

Query: 50  ATSVHDKVSLINVLTVTINSQEYVKIKCAFGKVICAEANGILKQGI-ITT---VAVKMLK 105
           A++     SL+    +  ++++ +         +   A  I+ +     T    A+K+LK
Sbjct: 28  ASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK 87

Query: 106 EGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHR 165
                 +   + +E+ ++  +  H NII L  +      + +++E    G L D + +  
Sbjct: 88  ---KTVDKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK- 142

Query: 166 PSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              GY              +E+D      Q+   + YL    +
Sbjct: 143 ---GY-------------YSERDAADAVKQILEAVAYLHENGI 169

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 27/132 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLK-EGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           + G V  A      +Q     VAVKM+        E   L +E+ +M+   QH N++ + 
Sbjct: 57  STGIVCLAREKHSGRQ-----VAVKMMDLRKQQRRE--LLFNEVVIMRDY-QHFNVVEMY 108

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
                   L+V++EF   G L D + +                    L E+ + +    V
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQ------------------VRLNEEQIATVCEAV 150

Query: 197 ANGMHYLQSRKV 208
              + YL ++ V
Sbjct: 151 LQALAYLHAQGV 162

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 28/134 (20%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIIN 134
           AF  V        G          A  ++  +  S  +   L  E  + +++ +H NI+ 
Sbjct: 23  AFSVVRRCVKVLAGQE-------YAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVR 74

Query: 135 LLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           L    +++G  Y+I +    G L + +        Y              +E D      
Sbjct: 75  LHDSISEEGHHYLIFDLVTGGELFEDIVAR----EY-------------YSEADASHCIQ 117

Query: 195 QVANGMHYLQSRKV 208
           Q+   + +     V
Sbjct: 118 QILEAVLHCHQMGV 131

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 3e-04
 Identities = 34/263 (12%), Positives = 82/263 (31%), Gaps = 69/263 (26%)

Query: 22  SSW---KAFPLPSDLSTAAVLLPNLFWAF---------NIATSVHDKVSLINVLTVTINS 69
             +   +   LP ++ T      ++             N      DK++   ++  ++N 
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT--TIIESSLNV 365

Query: 70  QEYVKIKCAFGKVICAEANGILKQGI-ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ 128
            E  + +  F      +   +      I T+ + ++      +++M +V+++    ++ +
Sbjct: 366 LEPAEYRKMF------DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK 419

Query: 129 H-------INIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNG 181
                   I  I L      +       E+A H ++ D     +    ++S       + 
Sbjct: 420 QPKESTISIPSIYLELKVKLEN------EYALHRSIVDHYNIPK---TFDS-------DD 463

Query: 182 NVLTEKDLISFAYQVANGMHYLQSRKVGNDAV--------RFIGFDLCILVFFHDSTLLK 233
            +    D   +++    G H           +        RF+   +      HDST   
Sbjct: 464 LIPPYLDQYFYSHI---GHHLKNIEHPERMTLFRMVFLDFRFLEQKIR-----HDSTAWN 515

Query: 234 TTSTIASLILRNQKVSVLLDLIF 256
            + +I +          L  L F
Sbjct: 516 ASGSILNT---------LQQLKF 529

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 35/140 (25%)

Query: 78  AFGKV-ICAE-ANGILKQGIITTVAVKML-------KEGHSDAEMMDLVSEMEMMKMIGQ 128
           A G+V +  E             VA+K++                +++ +E+E++K +  
Sbjct: 22  ACGEVKLAFERKTCK-------KVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-N 73

Query: 129 HINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKD 188
           H  II +          Y+++E    G L D +  +                   L E  
Sbjct: 74  HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGN-----------------KRLKEAT 115

Query: 189 LISFAYQVANGMHYLQSRKV 208
              + YQ+   + YL    +
Sbjct: 116 CKLYFYQMLLAVQYLHENGI 135

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 29/135 (21%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKML-KEGHSDAEMMDLV-SEMEMMKMIGQHINII 133
           +FG+VI  +    G          AVK++ K         + +  E++++K +  H NI+
Sbjct: 38  SFGEVILCKDKITGQ-------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIM 89

Query: 134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
            L       G  Y++ E    G L D +   +                   +E D     
Sbjct: 90  KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-----------------FSEVDAARII 132

Query: 194 YQVANGMHYLQSRKV 208
            QV +G+ Y+   K+
Sbjct: 133 RQVLSGITYMHKNKI 147

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 31/146 (21%)

Query: 69  SQEYVKIKC----AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
           ++ +  +      AFGKV  A+    G          A K+++    + E+ D + E+E+
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETG-------ALAAAKVIETKSEE-ELEDYIVEIEI 69

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           +     H  I+ LLG    DG L++++EF P G +   + +                   
Sbjct: 70  LATC-DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLEL----------------DR 112

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
            LTE  +     Q+   +++L S+++
Sbjct: 113 GLTEPQIQVVCRQMLEALNFLHSKRI 138

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 97  TTVAVKMLKEGHSDAEM---MDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAP 153
           TTVAVK L                 E+++M    QH N++ LLG  +    L ++  + P
Sbjct: 55  TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLVYVYMP 113

Query: 154 HGNLRDFL 161
           +G+L D L
Sbjct: 114 NGSLLDRL 121

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 27/132 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLK-EGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           A G V  A        G    VA++ +  +     E   +++E+ +M+   ++ NI+N L
Sbjct: 32  ASGTVYTAMDV---ATGQE--VAIRQMNLQQQPKKE--LIINEILVMREN-KNPNIVNYL 83

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
                   L+V++E+   G+L D + +                    + E  + +   + 
Sbjct: 84  DSYLVGDELWVVMEYLAGGSLTDVVTE------------------TCMDEGQIAAVCREC 125

Query: 197 ANGMHYLQSRKV 208
              + +L S +V
Sbjct: 126 LQALEFLHSNQV 137

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 26/132 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           ++G+V  A   G   +      A K + K    D +      E+E+MK +  H NII L 
Sbjct: 21  SWGEVKIAVQKGTRIR-----RAAKKIPKYFVEDVD--RFKQEIEIMKSL-DHPNIIRLY 72

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
                +  +Y+++E    G L + +                        E D       V
Sbjct: 73  ETFEDNTDIYLVMELCTGGELFERVVHK----RV-------------FRESDAARIMKDV 115

Query: 197 ANGMHYLQSRKV 208
            + + Y     V
Sbjct: 116 LSAVAYCHKLNV 127

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 28/134 (20%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIIN 134
           +FG+V+  +               AVK++ K    + +   ++ E+E++K +  H NI+ 
Sbjct: 34  SFGEVLKCKDRITQQ-------EYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMK 85

Query: 135 LLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
           L  +       Y++ E    G L D + K                     +E D      
Sbjct: 86  LFEILEDSSSFYIVGELYTGGELFDEIIKR----KR-------------FSEHDAARIIK 128

Query: 195 QVANGMHYLQSRKV 208
           QV +G+ Y+    +
Sbjct: 129 QVFSGITYMHKHNI 142

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 21/143 (14%), Positives = 56/143 (39%), Gaps = 33/143 (23%)

Query: 72  YVKIKC----AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKM 125
           +  ++     ++G V  A     G         VA+K +     ++++ +++ E+ +M+ 
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETG-------QIVAIKQVP---VESDLQEIIKEISIMQQ 80

Query: 126 IGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLT 185
                +++   G   ++  L++++E+   G++ D +R                     LT
Sbjct: 81  C-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR----------------NKTLT 123

Query: 186 EKDLISFAYQVANGMHYLQSRKV 208
           E ++ +       G+ YL   + 
Sbjct: 124 EDEIATILQSTLKGLEYLHFMRK 146

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 22/107 (20%)

Query: 105 KEGHSDAEMMDLVS-EMEMMKMIGQHINIINLLGV--CTQDGPLYVIVEFAPHGNLRDFL 161
                    ++ V  E+ ++K +  H N++ L+ V     +  LY++ E    G + +  
Sbjct: 71  GGCIQPRGPIEQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129

Query: 162 RKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                                 L+E     +   +  G+ YL  +K+
Sbjct: 130 TLKP------------------LSEDQARFYFQDLIKGIEYLHYQKI 158

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 30/134 (22%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           AF +V   +     K       A+K + K        ++  +E+ ++K I +H NI+ L 
Sbjct: 21  AFSEVFLVKQRLTGKL-----FALKCIKKSPAFRDSSLE--NEIAVLKKI-KHENIVTLE 72

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFL--RKHRPSSGYESPLGSAYTNGNVLTEKDLISFAY 194
            +       Y++++    G L D +  R                      TEKD      
Sbjct: 73  DIYESTTHYYLVMQLVSGGELFDRILERGV-------------------YTEKDASLVIQ 113

Query: 195 QVANGMHYLQSRKV 208
           QV + + YL    +
Sbjct: 114 QVLSAVKYLHENGI 127

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	258
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.98
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.98
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.98
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.98
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.98
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.98
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.98
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.98
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.98
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.98
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.98
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.97
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.97
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.97
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.97
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.97
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.97
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.97
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.97
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.97
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.97
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.97
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.97
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.97
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.96
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.96
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.96
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.96
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.96
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.96
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.96
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.96
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.96
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.96
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.96
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.96
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.96
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.96
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.96
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.96
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.96
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.96
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.96
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.96
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.96
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.96
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.96
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.96
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.96
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.96
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.96
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.96
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.96
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.96
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.96
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.96
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.96
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.96
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.95
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.95
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.95
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.95
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.95
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.95
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.95
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.95
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.95
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.95
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.95
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.95
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.95
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.95
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.95
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.94
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.94
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.94
3uqc_A	286	Probable conserved transmembrane protein; structur	99.94
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.92
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.92
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.92
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.85
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.74
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.55
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.01
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.79
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.69
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.09
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.64
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.59
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.51
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.16
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.52
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.42
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.41
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.36
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.15
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.48
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	91.53
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	90.63
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	90.35
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	89.63
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	86.14
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	84.64
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	84.54
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	82.79
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	82.13

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.7e-42  Score=291.40  Aligned_cols=182  Identities=27%  Similarity=0.331  Sum_probs=144.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.+.+.....+++.||||+++........++|.+|+.+|+++ +|||||+++|+|.+++.++|||||
T Consensus        32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~Ey  110 (308)
T 4gt4_A           32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQPLSMIFSY  110 (308)
T ss_dssp             EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCEEEEEEEc
Confidence            3799999999999998754444567899999998765556678899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      |++|+|.++|........... ..........+++.+++.|+.|||.||.|||+++|||||||             |+||
T Consensus       111 ~~~G~L~~~L~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DF  189 (308)
T 4gt4_A          111 CSHGDLHEFLVMRSPHSDVGS-TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDL  189 (308)
T ss_dssp             CSSCBHHHHHHTTCSSCCCC------CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCS
T ss_pred             CCCCcHHHHHHhhCccccccc-cccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCc
Confidence            999999999987543111000 00011123459999999999999999999999999999995             8999


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++.....+     ....||+.|||||++.+..|+.++||.
T Consensus       190 Glar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVw  231 (308)
T 4gt4_A          190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW  231 (308)
T ss_dssp             CCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             ccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhh
Confidence            9998654332     356899999999999999999999984

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=9e-42  Score=290.77  Aligned_cols=181  Identities=29%  Similarity=0.429  Sum_probs=141.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..+||+|+||.||+|++++.....++..||||+++.. +....++|.+|+++|+++ +|||||+++|+|.+++.++||||
T Consensus        46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~E  123 (329)
T 4aoj_A           46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFE  123 (329)
T ss_dssp             EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEE
Confidence            3489999999999999875444457899999999864 666778899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||++|+|.++|+........  ..........++++.+++.|+.||+.||.|||+++|||||||             |+|
T Consensus       124 y~~~G~L~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~D  201 (329)
T 4aoj_A          124 YMRHGDLNRFLRSHGPDAKL--LAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGD  201 (329)
T ss_dssp             CCTTCBHHHHHHTSSCC-------------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECC
T ss_pred             cCCCCcHHHHHHhcCccccc--ccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcc
Confidence            99999999999876531000  000011123459999999999999999999999999999995             899


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....+     ....||+.|||||++.+..|+.++||.
T Consensus       202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvw  244 (329)
T 4aoj_A          202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW  244 (329)
T ss_dssp             CC----------------CCCCGGGCCHHHHTTCCCCHHHHHH
T ss_pred             cccceeccCCCcceecCcccccccccChhhhcCCCCCcccccc
Confidence            99998654332     356799999999999999999999984

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.4e-42  Score=290.65  Aligned_cols=178  Identities=29%  Similarity=0.402  Sum_probs=143.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|++.+.....++..||||+++.. +....++|.+|+.+|+++ +|||||+++|+|.+++.++|||||
T Consensus        19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey   96 (299)
T 4asz_A           19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEY   96 (299)
T ss_dssp             EEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEEc
Confidence            389999999999999875444456789999999865 566678899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      |++|+|.++|+..+....    ..........+++.+++.|+.||+.||.|||+++|||||||             |+||
T Consensus        97 ~~~G~L~~~l~~~~~~~~----~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DF  172 (299)
T 4asz_A           97 MKHGDLNKFLRAHGPDAV----LMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF  172 (299)
T ss_dssp             CTTCBHHHHHHHTSHHHH----HC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred             CCCCcHHHHHHhcCcccc----cccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCc
Confidence            999999999987531000    00000123459999999999999999999999999999995             8999


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+|+.....+     ....||+.|||||++.+..|+.++||.
T Consensus       173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVw  214 (299)
T 4asz_A          173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW  214 (299)
T ss_dssp             SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHH
Confidence            9998643332     345689999999999999999999974

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.2e-41  Score=290.99  Aligned_cols=162  Identities=15%  Similarity=0.254  Sum_probs=139.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...     .+++.||||+++... .....+.+.+|+.+|+++ +|||||++++++.+++.+||||||
T Consensus        31 ~lG~G~fg~V~~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiVmEy  104 (350)
T 4b9d_A           31 KIGEGSFGKAILVKST-----EDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIVMDY  104 (350)
T ss_dssp             EC------CEEEEEET-----TTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEecCCCeEEEEEEEC-----CCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEeC
Confidence            8999999999999987     688999999997543 556678899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      |++|+|.++|...+.               ..+++.+++.|+.||+.||.|||++||||||||             |+||
T Consensus       105 ~~gg~L~~~i~~~~~---------------~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DF  169 (350)
T 4b9d_A          105 CEGGDLFKRINAQKG---------------VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDF  169 (350)
T ss_dssp             CTTCBHHHHHHHTTT---------------CCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECST
T ss_pred             CCCCcHHHHHHHcCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEccc
Confidence            999999999986543               337999999999999999999999999999996             8999


Q ss_pred             CcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+|+......   ...+||+.|||||++.+..|+.++||.
T Consensus       170 Gla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~Diw  209 (350)
T 4b9d_A          170 GIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIW  209 (350)
T ss_dssp             TEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHH
T ss_pred             ccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHH
Confidence            9998754432   467899999999999999999999973

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=6.8e-42  Score=288.01  Aligned_cols=159  Identities=17%  Similarity=0.296  Sum_probs=143.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +||+|+||+||+|..+     .+++.||||+++...  .....+.+.+|+.+|+.+ +|||||++++++.+++.+|||||
T Consensus        39 ~lG~G~fg~V~~a~~~-----~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yivmE  112 (311)
T 4aw0_A           39 ILGEGSFSTVVLAREL-----ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLS  112 (311)
T ss_dssp             EEEEETTEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEecccCeEEEEEEEC-----CCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEe
Confidence            8999999999999998     688999999996421  123356799999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||++|+|.++|.+.+.                 +++..++.|+.||+.||+|||++||||||||             |+|
T Consensus       113 y~~gG~L~~~i~~~~~-----------------l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~D  175 (311)
T 4aw0_A          113 YAKNGELLKYIRKIGS-----------------FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD  175 (311)
T ss_dssp             CCTTEEHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECC
T ss_pred             cCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEE
Confidence            9999999999998766                 9999999999999999999999999999996             899


Q ss_pred             CCcceeeecc-----CCccccccccccccccccCCCCcccce
Q psy12228        218 FDLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       218 fgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      ||+|+.....     ..+.+||+.|||||++.+..|+.++||
T Consensus       176 FGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~Di  217 (311)
T 4aw0_A          176 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDL  217 (311)
T ss_dssp             CTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHH
T ss_pred             cCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHH
Confidence            9999976432     246799999999999999999999997

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.4e-41  Score=289.99  Aligned_cols=158  Identities=20%  Similarity=0.259  Sum_probs=141.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|..+     .+++.||||+++.. .....+.+.+|+.+|+.+ +|||||++++++.+++.+|||||||
T Consensus        81 ~iG~G~fG~V~~a~~~-----~tg~~vAiK~i~~~-~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           81 KIGEGSTGIVCIATVR-----SSGKLVAVKKMDLR-KQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             EEEECSSCEEEEEEET-----TTCCEEEEEEEEGG-GCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             EeecCcCeEEEEEEEC-----CCCCEEEEEEEecC-chhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCC
Confidence            7999999999999998     68899999999643 222345688999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.+. .                 +++.+++.|+.||+.||+|||++||||||||             |+|||
T Consensus       154 ~gg~L~~~l~~~-~-----------------l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFG  215 (346)
T 4fih_A          154 EGGALTDIVTHT-R-----------------MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG  215 (346)
T ss_dssp             TTEEHHHHHHHS-C-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred             CCCcHHHHHHcC-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCc
Confidence            999999999763 2                 8999999999999999999999999999996             89999


Q ss_pred             cceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|+.....   ..+.+||+.|||||++.+..|+.++||-
T Consensus       216 la~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiW  254 (346)
T 4fih_A          216 FCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIW  254 (346)
T ss_dssp             TCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             CceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHH
Confidence            99876443   2578999999999999999999999973

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-40  Score=278.94  Aligned_cols=161  Identities=19%  Similarity=0.271  Sum_probs=140.7

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCC-CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPL  145 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~  145 (258)
                      +.+||+|+||.||+|.+.     .++..||+|++... ......+.|.+|+.+|+++ +|||||+++++|.+    ++.+
T Consensus        31 ~~~iG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~  104 (290)
T 3fpq_A           31 DIEIGRGSFKTVYKGLDT-----ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             EEEEEECSSEEEEEEEET-----TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEE
T ss_pred             eeEEecCcCcEEEEEEEC-----CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEE
Confidence            347999999999999998     67899999999643 3555678899999999999 99999999999875    3458


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--ccccCcc---------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK--VGNDAVR---------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--iiH~DlK---------  214 (258)
                      +||||||++|+|.++|.+...                 +++..++.|+.||+.||.|||+++  |||||||         
T Consensus       105 ~lvmEy~~gg~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~  167 (290)
T 3fpq_A          105 VLVTELMTSGTLKTYLKRFKV-----------------MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP  167 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESST
T ss_pred             EEEEeCCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECC
Confidence            999999999999999998765                 999999999999999999999998  9999996         


Q ss_pred             -----ccCCCcceeeeccC-CccccccccccccccccCCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                           |+|||+|+...... .+.+||+.|||||++.+ +|+.++||.
T Consensus       168 ~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~Diw  213 (290)
T 3fpq_A          168 TGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVY  213 (290)
T ss_dssp             TSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHH
T ss_pred             CCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHH
Confidence                 88999998543332 57799999999999876 699999984

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=7.4e-41  Score=292.29  Aligned_cols=160  Identities=20%  Similarity=0.258  Sum_probs=142.7

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|..+     .+++.||||+++.. .....+.+.+|+.+|+.+ +|||||+++++|.+++.+|||||
T Consensus       156 ~~~iG~G~fG~V~~a~~~-----~tg~~vAiK~i~~~-~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~iVmE  228 (423)
T 4fie_A          156 FIKIGEGSTGIVCIATVR-----SSGKLVAVKKMDLR-KQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVME  228 (423)
T ss_dssp             EEEEEECSSCEEEEEEET-----TTCCEEEEEEEEST-TCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEeccCcCcEEEEEEEC-----CCCCEEEEEEEecc-chhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEEEEEe
Confidence            347999999999999998     68899999999754 223345689999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||++|+|.+++....                  +++.++..|+.||+.||+|||++||||||||             |+|
T Consensus       229 y~~gG~L~~~i~~~~------------------l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~D  290 (423)
T 4fie_A          229 FLEGGALTDIVTHTR------------------MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD  290 (423)
T ss_dssp             CCTTEEHHHHHHHSC------------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECC
T ss_pred             CCCCCcHHHHHhccC------------------CCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEec
Confidence            999999999997532                  8999999999999999999999999999996             899


Q ss_pred             CCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+|+.....   ..+.+||+.|||||++.+..|+.++||-
T Consensus       291 FGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiW  331 (423)
T 4fie_A          291 FGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIW  331 (423)
T ss_dssp             CTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHH
T ss_pred             CccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHH
Confidence            9999875443   2578999999999999999999999973

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.3e-40  Score=283.33  Aligned_cols=156  Identities=17%  Similarity=0.226  Sum_probs=138.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..+||+|+||.||+|..+     .+++.||||+++....      ..+|+.+|+.+ +|||||++++++.+++.++||||
T Consensus        63 ~~~lG~G~fG~Vy~a~~~-----~~g~~vAiK~i~~~~~------~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~ivmE  130 (336)
T 4g3f_A           63 QPRVGRGSFGEVHRMKDK-----QTGFQCAVKKVRLEVF------RVEELVACAGL-SSPRIVPLYGAVREGPWVNIFME  130 (336)
T ss_dssp             EEEEEEETTEEEEEEEET-----TTCCEEEEEEEETTTC------CTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEEEC
T ss_pred             CcEeccCCCeEEEEEEEC-----CCCCEEEEEEECHHHh------HHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEe
Confidence            347999999999999998     6889999999975422      24799999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------cc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------FI  216 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i~  216 (258)
                      ||++|+|.++|+..+.                 +++..++.|+.||+.||+|||+++|||||||              |+
T Consensus       131 y~~gg~L~~~l~~~~~-----------------l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~  193 (336)
T 4g3f_A          131 LLEGGSLGQLIKQMGC-----------------LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALC  193 (336)
T ss_dssp             CCTTCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEEC
T ss_pred             ccCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEe
Confidence            9999999999998766                 9999999999999999999999999999996              88


Q ss_pred             CCCcceeeeccC--------CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+|+......        ...+||+.|||||++.+..|+.++||.
T Consensus       194 DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~Diw  240 (336)
T 4g3f_A          194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW  240 (336)
T ss_dssp             CCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHH
T ss_pred             eCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHH
Confidence            999998754321        346899999999999999999999974

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.6e-40  Score=277.79  Aligned_cols=158  Identities=21%  Similarity=0.277  Sum_probs=133.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCC-CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|.++        ..||||+++.. .+....+.|.+|+.+|+++ +|||||+++|++.. +.++||||
T Consensus        42 ~~iG~G~fG~Vy~~~~~--------~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~-~~~~iVmE  111 (307)
T 3omv_A           42 TRIGSGSFGTVYKGKWH--------GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             EECCCCSSSEEEEEESS--------SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-SSCEEEEE
T ss_pred             eEEeeCCCcEEEEEEEC--------CcEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEC-CeEEEEEE
Confidence            38999999999999886        35999999743 3556678899999999999 99999999998864 56899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||++|+|.++|.....                .+++.++..|+.|||.||.|||+++|||||||             |+|
T Consensus       112 y~~gGsL~~~l~~~~~----------------~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~D  175 (307)
T 3omv_A          112 WCEGSSLYKHLHVQET----------------KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGD  175 (307)
T ss_dssp             CCSSCBHHHHHHTSCC----------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECC
T ss_pred             cCCCCCHHHHHhhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEee
Confidence            9999999999986542                39999999999999999999999999999995             899


Q ss_pred             CCcceeeecc-----CCcccccccccccccccc---CCCCccccee
Q psy12228        218 FDLCILVFFH-----DSTLLKTTSTIASLILRN---QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~-----~~~~~gt~~y~aPE~~~~---~~~s~~~Dv~  255 (258)
                      ||+|+.....     ....+||+.|||||++.+   .+|+.++||.
T Consensus       176 FGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVw  221 (307)
T 3omv_A          176 FGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVY  221 (307)
T ss_dssp             CSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHH
T ss_pred             ccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhH
Confidence            9999865332     245789999999999964   4689999984

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=5.8e-40  Score=281.89  Aligned_cols=183  Identities=36%  Similarity=0.504  Sum_probs=148.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-CcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-GPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-~~~~lv~e  150 (258)
                      ..||+|+||.||+|.+.+.....+++.||||.++........+.|.+|+.+|+++.+|||||+++|+|..+ +.++||||
T Consensus        70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~E  149 (353)
T 4ase_A           70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE  149 (353)
T ss_dssp             EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEE
T ss_pred             eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEE
Confidence            38999999999999988655555678999999988767777788999999999995569999999999764 56899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||++|+|.++|+....... .............+++.+++.|+.|||.||.|||+++|||||||             |+|
T Consensus       150 y~~~G~L~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~D  228 (353)
T 4ase_A          150 FCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD  228 (353)
T ss_dssp             CCTTEEHHHHHHHTGGGBC-CC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             cCCCCCHHHHHHhcccccc-cccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECc
Confidence            9999999999987542000 00000011123458999999999999999999999999999995             899


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+|+......     ....||+.|||||++.+..|+.++||.
T Consensus       229 FGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVw  271 (353)
T 4ase_A          229 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW  271 (353)
T ss_dssp             CGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             chhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEe
Confidence            99998654332     356789999999999999999999984

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=6.1e-40  Score=276.16  Aligned_cols=164  Identities=14%  Similarity=0.202  Sum_probs=133.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC--------
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--------  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~--------  143 (258)
                      ..||+|+||.||+|..+     .+++.||||+++........+.+.+|+.+|+++ +|||||++++++.+.+        
T Consensus        11 ~~lG~G~fg~V~~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A           11 QCLGRGGFGVVFEAKNK-----VDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             EEEEECC--EEEEEEET-----TTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC--------
T ss_pred             eEEecCCCeEEEEEEEC-----CCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCcccccccc
Confidence            38999999999999987     678999999997665666678899999999999 9999999999987544        


Q ss_pred             ----cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----
Q psy12228        144 ----PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----  214 (258)
Q Consensus       144 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----  214 (258)
                          .++||||||++|+|.+++.....              ....++..++.|+.||+.||+|||++||||||||     
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~--------------~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NIL  150 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCT--------------IEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIF  150 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCS--------------GGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCC--------------CChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeE
Confidence                37899999999999999987653              1225677789999999999999999999999996     


Q ss_pred             --------ccCCCcceeeeccC---------------CccccccccccccccccCCCCccccee
Q psy12228        215 --------FIGFDLCILVFFHD---------------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --------i~dfgl~~~~~~~~---------------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                              |+|||+|+......               ...+||+.|||||++.+..|+.++||.
T Consensus       151 l~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~Diw  214 (299)
T 4g31_A          151 FTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIF  214 (299)
T ss_dssp             ECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHH
T ss_pred             ECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHH
Confidence                    88999998654321               245799999999999999999999974

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=6.7e-40  Score=272.02  Aligned_cols=160  Identities=18%  Similarity=0.273  Sum_probs=128.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .+++.||||+++...  .....+.+.+|+.+|+.+ +|||||++++++.+++.++|||
T Consensus        19 ~~lG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           19 KTLGEGSFGKVKLAYHT-----TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             EEEEC---CCEEEEECT-----TTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEecCcCeEEEEEEEC-----CCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEE
Confidence            38999999999999987     678999999997543  223356799999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||| +|+|.+++...+.                 +++.+++.++.||+.||+|||++||+|||||             ++
T Consensus        93 Ey~-~g~L~~~l~~~~~-----------------l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~  154 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRDK-----------------MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIA  154 (275)
T ss_dssp             ECC-CEEHHHHHHHSCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEEC
T ss_pred             eCC-CCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEe
Confidence            999 5799999988765                 9999999999999999999999999999996             88


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCC-Cccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                      |||+|+......  .+.+||+.|||||++.+..| +.++||-
T Consensus       155 DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~Diw  196 (275)
T 3hyh_A          155 DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVW  196 (275)
T ss_dssp             CSSCC---------------CTTSCHHHHSSSSCCCTHHHHH
T ss_pred             ecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhH
Confidence            999998654433  56899999999999999887 5899973

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.3e-40  Score=279.93  Aligned_cols=163  Identities=21%  Similarity=0.240  Sum_probs=135.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|+...  ...+++.||||+++... .......+.+|+.+|+++ +|||||++++++.+++.++|||||
T Consensus        31 ~lG~G~fg~Vy~a~~~~--~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmEy  107 (304)
T 3ubd_A           31 VLGQGSFGKVFLVKKIS--GSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDF  107 (304)
T ss_dssp             EEECGGGCEEEEEEECS--STTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEETTEEEEEECC
T ss_pred             EEecCCCeEEEEEEEcc--CCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEEc
Confidence            89999999999998741  12357899999996532 222334688999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      |++|+|.++|.+.+.                 +++.+++.|+.||+.||+|||++||||||||             |+||
T Consensus       108 ~~gg~L~~~l~~~~~-----------------l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DF  170 (304)
T 3ubd_A          108 LRGGDLFTRLSKEVM-----------------FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF  170 (304)
T ss_dssp             CTTCEEHHHHHHHCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESS
T ss_pred             CCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEeccc
Confidence            999999999998776                 9999999999999999999999999999996             8899


Q ss_pred             Ccceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+|+.....   ..+.+||+.|||||++.+..|+.++||-
T Consensus       171 Gla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~Diw  210 (304)
T 3ubd_A          171 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWW  210 (304)
T ss_dssp             EEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHH
T ss_pred             ccceeccCCCccccccccCcccCCHHHhccCCCCCCCccc
Confidence            999864332   2578999999999999999999999973

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=7.5e-38  Score=264.16  Aligned_cols=156  Identities=20%  Similarity=0.284  Sum_probs=126.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC----cEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG----PLYV  147 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~----~~~l  147 (258)
                      ..||+|+||.||+|.++       ++.||||+++..  ......+..|+..+.++ +|||||+++|+|.+++    .++|
T Consensus         9 ~~iG~G~fG~Vy~~~~~-------g~~VAvK~l~~~--~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~~~l   78 (303)
T 3hmm_A            9 ESIGKGRFGEVWRGKWR-------GEEVAVKIFSSR--EERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             EEEEECSSSEEEEEEET-------TEEEEEEEECGG--GHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEEeeCCCeEEEEEEEC-------CEEEEEEEECcc--chhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceEEEE
Confidence            38999999999999885       378999999653  22222233456666778 9999999999998654    5799


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC--------CccccCcc-----
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR--------KVGNDAVR-----  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~--------~iiH~DlK-----  214 (258)
                      |||||++|+|.++|+...                  +++..+..++.|++.||.|||++        +|||||||     
T Consensus        79 V~Ey~~~gsL~~~l~~~~------------------l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NIL  140 (303)
T 3hmm_A           79 VSDYHEHGSLFDYLNRYT------------------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  140 (303)
T ss_dssp             EEECCTTCBHHHHHHHCC------------------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEE
T ss_pred             EecCCCCCcHHHHHHhCC------------------CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEE
Confidence            999999999999998643                  89999999999999999999987        99999995     


Q ss_pred             --------ccCCCcceeeeccC-------CccccccccccccccccC------CCCccccee
Q psy12228        215 --------FIGFDLCILVFFHD-------STLLKTTSTIASLILRNQ------KVSVLLDLI  255 (258)
Q Consensus       215 --------i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~s~~~Dv~  255 (258)
                              |+|||+|+......       ...+||+.|||||++.+.      .|+.++||.
T Consensus       141 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVw  202 (303)
T 3hmm_A          141 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  202 (303)
T ss_dssp             ECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred             ECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhh
Confidence                    89999998765432       245899999999999764      478899974

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-36  Score=265.67  Aligned_cols=160  Identities=19%  Similarity=0.273  Sum_probs=137.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc------CCc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ------DGP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~------~~~  144 (258)
                      ..||+|+||.||+|..+     .+++.||||+++... .....+.+.+|+.+|+.+ +|||||++++++..      .+.
T Consensus        60 ~~lG~G~fG~V~~a~~~-----~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           60 ETIGNGAYGVVSSARRR-----LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             EEEEECSSCEEEEEEET-----TTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTTTCCC
T ss_pred             EEEecccCeEEEEEEEC-----CCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccccCCE
Confidence            48999999999999998     688999999997543 345567899999999999 99999999998764      357


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +|||||||+ |+|.+++...+.                 +++..+..|+.||+.||.|||++||||||||          
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~~-----------------l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~  195 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQP-----------------LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC  195 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC
T ss_pred             EEEEEeCCC-CCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCC
Confidence            899999996 689999987655                 9999999999999999999999999999996          


Q ss_pred             ---ccCCCcceeeecc-------CCccccccccccccccccC-CCCccccee
Q psy12228        215 ---FIGFDLCILVFFH-------DSTLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                         ++|||+|+.....       ..+.+||+.|||||++.+. .|+.++||-
T Consensus       196 ~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiW  247 (398)
T 4b99_A          196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLW  247 (398)
T ss_dssp             CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHH
T ss_pred             CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhhee
Confidence               7899999865322       2467999999999998875 469999973

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.6e-36  Score=274.77  Aligned_cols=161  Identities=17%  Similarity=0.243  Sum_probs=144.7

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|..+     .+++.||+|++... .....+.+.+|+.+|+.+ +|||||++++++.+++.++||||
T Consensus       162 ~~~lG~G~fg~V~~~~~~-----~tg~~~AiK~i~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iv~E  234 (573)
T 3uto_A          162 HEELGTGAFGVVHRVTER-----ATGNNFAAKFVMTP-HESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYE  234 (573)
T ss_dssp             EEEEEEETTEEEEEEEET-----TTCCEEEEEEEECC-SHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EEEEeeccCeEEEEEEEC-----CCCCEEEEEEEecc-chhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEe
Confidence            447999999999999998     68899999999764 455567899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------c
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------F  215 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------i  215 (258)
                      ||++|+|.++|.....                .+++.++..|+.||+.||.|||+++|+|||||               |
T Consensus       235 ~~~gg~L~~~i~~~~~----------------~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl  298 (573)
T 3uto_A          235 FMSGGELFEKVADEHN----------------KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKL  298 (573)
T ss_dssp             CCCCCBHHHHHTCTTS----------------CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEE
T ss_pred             ecCCCcHHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEE
Confidence            9999999999975432                39999999999999999999999999999995               7


Q ss_pred             cCCCcceeeeccC--CccccccccccccccccCCCCcccce
Q psy12228        216 IGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       216 ~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                      +|||+|+......  ...+||+.|||||++.+..|+.++||
T Consensus       299 ~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~Di  339 (573)
T 3uto_A          299 IDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDM  339 (573)
T ss_dssp             CCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHH
T ss_pred             eeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHH
Confidence            8999999765543  46789999999999999999999997

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=4e-36  Score=274.14  Aligned_cols=161  Identities=15%  Similarity=0.154  Sum_probs=136.7

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-----ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-----SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL  145 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~  145 (258)
                      ..+||+|+||.||+|..+     .+++.||||++++..     ..........++.+++.+ +|||||+++++|.+.+.+
T Consensus       194 ~k~LG~G~fG~V~la~~~-----~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          194 HRIIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             EEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEE
T ss_pred             EEEEecccCeEEEEEEEC-----CCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCEE
Confidence            348999999999999998     688999999996421     111122223345566667 899999999999999999


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      |||||||+||+|.++|.+.+.                 +++..++.|+.||+.||+|||++||||||||           
T Consensus       268 ylVmEy~~GGdL~~~l~~~~~-----------------l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~  330 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHGV-----------------FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH  330 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHCC-----------------CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSC
T ss_pred             EEEEecCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCC
Confidence            999999999999999998776                 9999999999999999999999999999996           


Q ss_pred             --ccCCCcceeeecc-CCccccccccccccccc-cCCCCcccce
Q psy12228        215 --FIGFDLCILVFFH-DSTLLKTTSTIASLILR-NQKVSVLLDL  254 (258)
Q Consensus       215 --i~dfgl~~~~~~~-~~~~~gt~~y~aPE~~~-~~~~s~~~Dv  254 (258)
                        |+|||+|+..... ..+.+||+.|||||++. +..|+.++||
T Consensus       331 vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDi  374 (689)
T 3v5w_A          331 VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW  374 (689)
T ss_dssp             EEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHH
T ss_pred             EEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHH
Confidence              8999999875443 36789999999999996 4689999997

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=9.2e-36  Score=256.95  Aligned_cols=158  Identities=14%  Similarity=0.191  Sum_probs=133.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|..+.  ...+++.||+|.+.....   ..++.+|+.+|+.+.+|||||++++++.+.+.++|||||
T Consensus        27 ~~lG~G~fg~Vy~a~~~~--~~~~~~~vAiK~i~~~~~---~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~  101 (361)
T 4f9c_A           27 DKIGEGTFSSVYLATAQL--QVGPEEKIALKHLIPTSH---PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPY  101 (361)
T ss_dssp             EEEEECSSEEEEEEEEEB--TTSCEEEEEEEEECTTSC---HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEEC
T ss_pred             EEEecccCcEEEEEEEcc--cCCCCCEEEEEEEccccC---HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeC
Confidence            389999999999998641  124678999999975422   346889999999987799999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i~d  217 (258)
                      |++|+|.+++..                    +++.+++.|+.||+.||+|||++||||||||              ++|
T Consensus       102 ~~g~~L~~~~~~--------------------l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~D  161 (361)
T 4f9c_A          102 LEHESFLDILNS--------------------LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVD  161 (361)
T ss_dssp             CCCCCHHHHHTT--------------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             CCcccHHHHHcC--------------------CCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECc
Confidence            999999999842                    8999999999999999999999999999996              789


Q ss_pred             CCcceeeecc-------------------------------CCccccccccccccccccC-CCCcccce
Q psy12228        218 FDLCILVFFH-------------------------------DSTLLKTTSTIASLILRNQ-KVSVLLDL  254 (258)
Q Consensus       218 fgl~~~~~~~-------------------------------~~~~~gt~~y~aPE~~~~~-~~s~~~Dv  254 (258)
                      ||+|+.....                               ....+||+.|||||++.+. .|+.++||
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~Di  230 (361)
T 4f9c_A          162 FGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDM  230 (361)
T ss_dssp             CTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHH
T ss_pred             CCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccch
Confidence            9999754221                               1245799999999999875 58999997

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=8.6e-33  Score=236.63  Aligned_cols=161  Identities=22%  Similarity=0.290  Sum_probs=141.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .+++.||+|+++...  .......+.+|+.+++.+ +||||+++++++.+.+.+++||
T Consensus        11 ~~lG~G~fg~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A           11 KLLGKGTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEecCCCeEEEEEEEC-----CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEEE
Confidence            38999999999999987     578999999996431  122346788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||             ++
T Consensus        85 E~~~gg~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~  147 (337)
T 1o6l_A           85 EYANGGELFFHLSRERV-----------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKIT  147 (337)
T ss_dssp             ECCTTCBHHHHHHHHSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             eCCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEe
Confidence            99999999999988765                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....   ....+||+.|+|||++.+..++.++||.
T Consensus       148 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  189 (337)
T 1o6l_A          148 DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW  189 (337)
T ss_dssp             CCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHH
T ss_pred             eccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcc
Confidence            99999853222   2567899999999999999999999974

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.6e-32  Score=234.17  Aligned_cols=162  Identities=22%  Similarity=0.323  Sum_probs=143.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ...||+|+||.||+|...     .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus        20 ~~~lG~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           20 LKTIGKGNFAKVKLARHI-----LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             EEEEEECSSEEEEEEEET-----TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEE
Confidence            348999999999999987     578999999996532 445667899999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++...+.                 +++..+..++.|++.||.|||++||+|||||             ++
T Consensus        94 e~~~~~~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~  156 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHGR-----------------MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIA  156 (328)
T ss_dssp             CCCTTCBHHHHHHHHCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             ECCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEe
Confidence            99999999999988765                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCCC-ccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKVS-VLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s-~~~Dv~  255 (258)
                      |||++.......  ...+||+.|+|||++.+..++ .++||.
T Consensus       157 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  198 (328)
T 3fe3_A          157 DFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVW  198 (328)
T ss_dssp             STTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHH
T ss_pred             eccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhh
Confidence            999997544332  467899999999999998875 789974

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.6e-32  Score=230.60  Aligned_cols=161  Identities=22%  Similarity=0.325  Sum_probs=142.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|.+... .....+.+.+|+.+++.+ +||||+++++++.+++..++||||
T Consensus        16 ~~lG~G~~g~V~~~~~~-----~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A           16 EVLGKGCFGQAIKVTHR-----ETGEVMVMKELIRF-DEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             EEEECCSSEEEEEEEET-----TTCCEEEEEEESCC-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ceecCCCCEEEEEEEEC-----CCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEEEEe
Confidence            38999999999999987     57899999998654 566678899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..+..++.|++.||.|||+++|+|||||             ++||
T Consensus        89 ~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Df  152 (310)
T 3s95_A           89 IKGGTLRGIIKSMDS----------------QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADF  152 (310)
T ss_dssp             CTTCBHHHHHHHCCT----------------TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCC
T ss_pred             cCCCcHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeec
Confidence            999999999987442                38999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC-----------------CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----------------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----------------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......                 ....||+.|+|||++.+..++.++||.
T Consensus       153 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  206 (310)
T 3s95_A          153 GLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVF  206 (310)
T ss_dssp             TTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHH
T ss_pred             ccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHH
Confidence            9998653322                 156799999999999999999999984

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.2e-32  Score=240.30  Aligned_cols=162  Identities=18%  Similarity=0.300  Sum_probs=141.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||+|+.+     .++..||+|+++...  .....+.+..|..++.++.+||||+++++++.+.+.+++||
T Consensus        58 ~~LG~G~fG~V~~~~~~-----~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~  132 (396)
T 4dc2_A           58 RVIGRGSYAKVLLVRLK-----KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI  132 (396)
T ss_dssp             EEEEECSSEEEEEEEET-----TTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEeeCCCeEEEEEEEC-----CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEE
Confidence            38999999999999987     678999999997532  22334568899999988768999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|..++...+.                 +++..++.++.||+.||.|||++||+|||||             |+
T Consensus       133 E~~~gg~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~  195 (396)
T 4dc2_A          133 EYVNGGDLMFHMQRQRK-----------------LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLT  195 (396)
T ss_dssp             ECCTTCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             EcCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEe
Confidence            99999999999998765                 9999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....   ....+||+.|+|||++.+..|+.++||.
T Consensus       196 DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~Diw  237 (396)
T 4dc2_A          196 DYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWW  237 (396)
T ss_dssp             CCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             ecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHH
Confidence            99999853222   3577899999999999999999999974

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=9e-33  Score=234.72  Aligned_cols=161  Identities=20%  Similarity=0.240  Sum_probs=143.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .+++.||+|+++...  .....+.+.+|+.+++.+ +||||+++++++.+.+.+++||
T Consensus        12 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A           12 RTLGTGSFGRVHLIRSR-----HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             EEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEEE
Confidence            38999999999999987     578999999996431  112346788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||             ++
T Consensus        86 e~~~gg~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~  148 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQR-----------------FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKIT  148 (318)
T ss_dssp             CCCCSCBHHHHHHHTSS-----------------CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             eCCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEe
Confidence            99999999999988655                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.........+||+.|+|||++.+..++.++||.
T Consensus       149 Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  187 (318)
T 1fot_A          149 DFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWW  187 (318)
T ss_dssp             CCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHH
T ss_pred             ecCcceecCCccccccCCccccCHhHhcCCCCCcccchh
Confidence            999999766666778999999999999999999999974

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=5.8e-33  Score=239.13  Aligned_cols=162  Identities=22%  Similarity=0.304  Sum_probs=138.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||+|..+     .++..||||+++...  .....+.+.+|..++..+.+||||+++++++.+.+.+++||
T Consensus        29 ~~lG~G~fg~V~~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~  103 (353)
T 3txo_A           29 RVLGKGSFGKVMLARVK-----ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM  103 (353)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEeeCCCEEEEEEEEc-----CCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence            38999999999999987     578999999997431  22334668899999999867999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||             |+
T Consensus       104 E~~~gg~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~  166 (353)
T 3txo_A          104 EFVNGGDLMFHIQKSRR-----------------FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLA  166 (353)
T ss_dssp             ECCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             eCCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEc
Confidence            99999999999988765                 9999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....   ....+||+.|+|||++.+..|+.++||.
T Consensus       167 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  208 (353)
T 3txo_A          167 DFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWW  208 (353)
T ss_dssp             CCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHH
T ss_pred             cccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCC
Confidence            99999853222   3567899999999999999999999974

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=3.7e-32  Score=233.43  Aligned_cols=162  Identities=19%  Similarity=0.302  Sum_probs=143.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .+++.||+|+++...  .....+.+.+|..++..+.+||||+++++++.+.+.+++||
T Consensus        15 ~~lG~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~   89 (345)
T 3a8x_A           15 RVIGRGSYAKVLLVRLK-----KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI   89 (345)
T ss_dssp             EEEEECSSEEEEEEEET-----TTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEEecCCeEEEEEEEC-----CCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence            38999999999999987     578999999997532  34556778899999998768999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||             ++
T Consensus        90 e~~~gg~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~  152 (345)
T 3a8x_A           90 EYVNGGDLMFHMQRQRK-----------------LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLT  152 (345)
T ss_dssp             CCCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             eCCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEE
Confidence            99999999999988765                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....   ....+||+.|+|||++.+..++.++||.
T Consensus       153 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  194 (345)
T 3a8x_A          153 DYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWW  194 (345)
T ss_dssp             CGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             eccccccccCCCCcccccCCCccccCccccCCCCCChHHhHH
Confidence            99999853222   3567899999999999999999999974

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=4.2e-32  Score=234.40  Aligned_cols=161  Identities=22%  Similarity=0.317  Sum_probs=142.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ..||+|+||.||+|...     .++..||+|+++.....     ...+.+.+|+.+++.+ +||||+++++++.+.+.++
T Consensus        18 ~~LG~G~fg~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           18 EELGSGQFAIVKKCREK-----STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRTDVV   91 (361)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE
T ss_pred             eEEeeCcCEEEEEEEEC-----CCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEeCCEEE
Confidence            38999999999999987     67899999999754321     1346799999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||            
T Consensus        92 lv~e~~~gg~L~~~l~~~~~-----------------l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~  154 (361)
T 2yab_A           92 LILELVSGGELFDFLAQKES-----------------LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP  154 (361)
T ss_dssp             EEEECCCSCBHHHHHTTCSC-----------------CBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSS
T ss_pred             EEEEcCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCC
Confidence            99999999999999977554                 9999999999999999999999999999995            


Q ss_pred             -----ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                           ++|||++.......  ....||+.|+|||++.+..++.++||.
T Consensus       155 ~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  202 (361)
T 2yab_A          155 IPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW  202 (361)
T ss_dssp             SCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHH
T ss_pred             ccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHH
Confidence                 78999998654432  467899999999999999999999974

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.98  E-value=3.2e-32  Score=229.06  Aligned_cols=159  Identities=18%  Similarity=0.277  Sum_probs=140.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|++.... ....+.+.+|+.+++.+ +||||+++++++...+..++||||
T Consensus        26 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           26 EKIGQGASGTVYTAMDV-----ATGQEVAIRQMNLQQ-QPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             EEEEEETTEEEEEEEBT-----TTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eeeccCCCeEEEEEEEC-----CCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEEEEEEC
Confidence            38999999999999987     578999999996532 22346789999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++....                  +++..+..++.|++.||.|||++||+|||||             ++||
T Consensus        99 ~~~~~L~~~~~~~~------------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Df  160 (297)
T 3fxz_A           99 LAGGSLTDVVTETC------------------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF  160 (297)
T ss_dssp             CTTCBHHHHHHHSC------------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCC
T ss_pred             CCCCCHHHHHhhcC------------------CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeC
Confidence            99999999998643                  8999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......   ....||+.|+|||++.+..++.++||.
T Consensus       161 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  200 (297)
T 3fxz_A          161 GFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW  200 (297)
T ss_dssp             TTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHH
T ss_pred             CCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHH
Confidence            9998654432   466899999999999999999999974

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.98  E-value=6.5e-32  Score=233.36  Aligned_cols=161  Identities=19%  Similarity=0.220  Sum_probs=143.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|+++... .....+.+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        35 ~~lG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           35 EELGKGAFSVVRRCVHK-----TTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred             eEEecCCCeEEEEEEEC-----CCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEe
Confidence            38999999999999987     578999999997543 445667899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||                
T Consensus       109 ~~~gg~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~k  171 (362)
T 2bdw_A          109 LVTGGELFEDIVAREF-----------------YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK  171 (362)
T ss_dssp             CCCSCBHHHHHTTCSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEE
T ss_pred             cCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEE
Confidence            9999999999987554                 8999999999999999999999999999985                


Q ss_pred             ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||++.......  ....||+.|+|||++.+..|+.++||.
T Consensus       172 l~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  214 (362)
T 2bdw_A          172 LADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW  214 (362)
T ss_dssp             ECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHH
T ss_pred             EeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHH
Confidence            78999998654332  357899999999999999999999974

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.98  E-value=1.4e-32  Score=236.59  Aligned_cols=161  Identities=17%  Similarity=0.223  Sum_probs=144.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|+++...  .....+.+.+|+.+++.+ +||||+++++++.+.+.+++||
T Consensus        47 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           47 KTLGTGSFGRVMLVKHK-----ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             EEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEeecCcCcEEEEEEEC-----CCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEE
Confidence            38999999999999987     578999999996421  112346788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||             ++
T Consensus       121 e~~~gg~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~  183 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIGR-----------------FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT  183 (350)
T ss_dssp             ECCTTCBHHHHHHHHCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             cCCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEc
Confidence            99999999999998765                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.........+||+.|+|||++.+..++.++||.
T Consensus       184 DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  222 (350)
T 1rdq_E          184 DFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWW  222 (350)
T ss_dssp             CCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHH
T ss_pred             ccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEe
Confidence            999999776666778999999999999999999999974

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.98  E-value=2.6e-32  Score=234.29  Aligned_cols=162  Identities=20%  Similarity=0.279  Sum_probs=141.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|..+     .+++.||||+++...  .....+.+..|..++..+.+||||+++++++.+.+.+++||
T Consensus        23 ~~lG~G~fg~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~   97 (345)
T 1xjd_A           23 KMLGKGSFGKVFLAEFK-----KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM   97 (345)
T ss_dssp             EEEEECSSSEEEEEEET-----TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEeeCCCeEEEEEEEC-----CCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEE
Confidence            38999999999999997     578999999997431  12234568889999988768999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||             ++
T Consensus        98 E~~~gg~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~  160 (345)
T 1xjd_A           98 EYLNGGDLMYHIQSCHK-----------------FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIA  160 (345)
T ss_dssp             ECCTTCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             eCCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEe
Confidence            99999999999988765                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....   ....+||+.|+|||++.+..++.++||.
T Consensus       161 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  202 (345)
T 1xjd_A          161 DFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWW  202 (345)
T ss_dssp             CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             EChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhH
Confidence            99999864322   3567899999999999999999999974

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.98  E-value=8.8e-32  Score=233.17  Aligned_cols=184  Identities=43%  Similarity=0.573  Sum_probs=146.5

Q ss_pred             eeeeeecCceEEEEEEEcccc--cCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGIL--KQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...||+|+||.||+|...+..  ...++..||||+++........+.+.+|+.+++.+.+||||+++++++.+.+.+++|
T Consensus        86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv  165 (370)
T 2psq_A           86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI  165 (370)
T ss_dssp             EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence            347999999999999975321  224578899999987666667788999999999997899999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++........ .............+++..++.++.||+.||.|||++||+|||||             +
T Consensus       166 ~e~~~~g~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl  244 (370)
T 2psq_A          166 VEYASKGNLREYLRARRPPGM-EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI  244 (370)
T ss_dssp             EECCTTCBHHHHHHHTCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             EEcCCCCCHHHHHHhhCCccc-cccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEE
Confidence            999999999999987653100 00000000112348999999999999999999999999999995             8


Q ss_pred             cCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......     ....+|+.|+|||++.+..++.++||.
T Consensus       245 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw  289 (370)
T 2psq_A          245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW  289 (370)
T ss_dssp             CCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHH
T ss_pred             ccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHH
Confidence            8999998644322     345667899999999999999999984

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.98  E-value=3.5e-32  Score=234.22  Aligned_cols=162  Identities=23%  Similarity=0.333  Sum_probs=141.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||+|...     .+++.||||+++...  .....+.+..|..++..+.+||||+++++++.+.+.+++||
T Consensus        26 ~~lG~G~fg~V~~~~~~-----~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~  100 (353)
T 2i0e_A           26 MVLGKGSFGKVMLSERK-----GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM  100 (353)
T ss_dssp             EEEEEETTEEEEEEEET-----TEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEE
Confidence            38999999999999987     678999999997431  11234678899999988768999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++...+.                 +++..++.++.||+.||.|||++||+|||||             ++
T Consensus       101 E~~~gg~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~  163 (353)
T 2i0e_A          101 EYVNGGDLMYHIQQVGR-----------------FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIA  163 (353)
T ss_dssp             ECCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             eCCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEE
Confidence            99999999999988765                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....   ....+||+.|+|||++.+..++.++||.
T Consensus       164 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  205 (353)
T 2i0e_A          164 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWW  205 (353)
T ss_dssp             CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHH
T ss_pred             eCCcccccccCCcccccccCCccccChhhhcCCCcCCccccc
Confidence            99999863322   3567899999999999999999999974

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.98  E-value=7.6e-32  Score=229.08  Aligned_cols=164  Identities=14%  Similarity=0.203  Sum_probs=138.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC--------
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--------  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~--------  143 (258)
                      ..||+|+||.||+|...     .++..||||+++........+.+.+|+.+++.+ +||||+++++++.+..        
T Consensus        12 ~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B           12 QCMGRGGFGVVFEAKNK-----VDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             EEEECC-CSEEEEEEET-----TTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             eEecCCCCeEEEEEEEc-----CCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccchhhhhh
Confidence            38999999999999987     578999999998655555678899999999999 9999999999986543        


Q ss_pred             -------------------------------------------------cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCC
Q psy12228        144 -------------------------------------------------PLYVIVEFAPHGNLRDFLRKHRPSSGYESPL  174 (258)
Q Consensus       144 -------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~  174 (258)
                                                                       ..++||||+++|+|.+++.....        
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--------  157 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--------  157 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--------
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--------
Confidence                                                             27999999999999999987653        


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCcceeeeccC-------------
Q psy12228        175 GSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILVFFHD-------------  228 (258)
Q Consensus       175 ~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~~~-------------  228 (258)
                            ....++..++.++.||+.||.|||++||+|||||             ++|||+++......             
T Consensus       158 ------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~  231 (332)
T 3qd2_B          158 ------LEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA  231 (332)
T ss_dssp             ------GGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------
T ss_pred             ------ccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccc
Confidence                  1336777899999999999999999999999996             78999998754331             


Q ss_pred             --CccccccccccccccccCCCCccccee
Q psy12228        229 --STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       229 --~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        ....||+.|+|||++.+..++.++||.
T Consensus       232 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  260 (332)
T 3qd2_B          232 THTGQVGTKLYMSPEQIHGNNYSHKVDIF  260 (332)
T ss_dssp             CCCSCC-CGGGSCHHHHHCCCCCTHHHHH
T ss_pred             cccccCCCcCccChHHhcCCCCcchhhHH
Confidence              345799999999999999999999974

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.98  E-value=1e-31  Score=225.66  Aligned_cols=160  Identities=16%  Similarity=0.269  Sum_probs=137.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .++..||+|++....  .....+.+.+|+.+++.+ +||||+++++++.+++..++|||
T Consensus        18 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e   91 (294)
T 4eqm_A           18 KLGGGGMSTVYLAEDT-----ILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCYYLVME   91 (294)
T ss_dssp             EEEEETTEEEEEEEET-----TTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEEEEEEE
T ss_pred             EEccCCCEEEEEEEEC-----CCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeEEEEEe
Confidence            8999999999999987     577899999985432  445567899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                 +++..++.++.|++.||.|||++||+|||||             ++|
T Consensus        92 ~~~g~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~D  154 (294)
T 4eqm_A           92 YIEGPTLSEYIESHGP-----------------LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFD  154 (294)
T ss_dssp             CCCSCBHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECC
T ss_pred             CCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEe
Confidence            9999999999988765                 9999999999999999999999999999995             789


Q ss_pred             CCcceeeecc----CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....    .....||+.|+|||++.+..++.++||.
T Consensus       155 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  196 (294)
T 4eqm_A          155 FGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIY  196 (294)
T ss_dssp             CSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHH
T ss_pred             CCCccccccccccccCccccCccccCHhHhcCCCCCchHhHH
Confidence            9999754332    2356799999999999999999999974

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.98  E-value=1.2e-31  Score=230.81  Aligned_cols=183  Identities=36%  Similarity=0.496  Sum_probs=145.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-cEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-PLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-~~~lv~e~  151 (258)
                      .||+|+||.||+|.+.+.....+++.||||+++........+.+.+|+.++..+.+||||+++++++.+.+ ..++||||
T Consensus        29 ~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~  108 (359)
T 3vhe_A           29 PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF  108 (359)
T ss_dssp             EEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEEC
T ss_pred             eecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEe
Confidence            89999999999999765444467899999999876666777889999999999988999999999998755 48999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCC-------------------------------------------------CCCCCCCCCCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYE-------------------------------------------------SPLGSAYTNGN  182 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~  182 (258)
                      +++|+|.+++........-.                                                 ...........
T Consensus       109 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (359)
T 3vhe_A          109 CKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKD  188 (359)
T ss_dssp             CTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTTTT
T ss_pred             cCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhcc
Confidence            99999999998764310000                                                 00000011133


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCCcceeeecc-----CCccccccccccccccc
Q psy12228        183 VLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFDLCILVFFH-----DSTLLKTTSTIASLILR  244 (258)
Q Consensus       183 ~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~  244 (258)
                      .+++..++.++.||+.||.|||+++|+|||||             ++|||+++.....     .....||+.|+|||++.
T Consensus       189 ~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  268 (359)
T 3vhe_A          189 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  268 (359)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhc
Confidence            48999999999999999999999999999996             7899999754322     23567788999999999


Q ss_pred             cCCCCccccee
Q psy12228        245 NQKVSVLLDLI  255 (258)
Q Consensus       245 ~~~~s~~~Dv~  255 (258)
                      +..++.++||.
T Consensus       269 ~~~~~~~~Di~  279 (359)
T 3vhe_A          269 DRVYTIQSDVW  279 (359)
T ss_dssp             HCCCCHHHHHH
T ss_pred             CCCCCchhhhh
Confidence            99999999974

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=1.4e-31  Score=227.65  Aligned_cols=160  Identities=20%  Similarity=0.258  Sum_probs=141.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|.++..  ......+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        11 ~~lG~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A           11 EDLGRGEFGIVHRCVET-----SSKKTYMAKFVKVK--GTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             EEEEECSSEEEEEEEET-----TTTEEEEEEEECCC--THHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECC
T ss_pred             eEEecCCCeEEEEEEEC-----CCCcEEEEEEEecC--cccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEEEEEEe
Confidence            38999999999999987     67899999999753  34456789999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------cc
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------FI  216 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------i~  216 (258)
                      +++|+|.+++.....                .+++..++.++.||+.||.|||++||+|||||               ++
T Consensus        83 ~~g~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~  146 (321)
T 1tki_A           83 ISGLDIFERINTSAF----------------ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKII  146 (321)
T ss_dssp             CCCCBHHHHHTSSSC----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEEC
T ss_pred             CCCCCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEE
Confidence            999999999976532                38999999999999999999999999999995               78


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++......  ....||+.|+|||++.+..++.++||.
T Consensus       147 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  187 (321)
T 1tki_A          147 EFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMW  187 (321)
T ss_dssp             CCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHH
T ss_pred             ECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHH
Confidence            999998754443  456789999999999998899999974

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.98  E-value=6e-32  Score=234.46  Aligned_cols=162  Identities=20%  Similarity=0.257  Sum_probs=137.8

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|...     .++..||+|+++.. .....+.+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        94 ~~~lG~G~~g~Vy~a~~~-----~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E  166 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEET-----ATGLKLAAKIIKTR-GMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVME  166 (373)
T ss_dssp             EEECC-----CEEEEEET-----TTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceEEecCcCEEEEEEEEc-----CCCcEEEEEEEccc-ccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEe
Confidence            347999999999999987     57899999999865 445567899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------c
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------F  215 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------i  215 (258)
                      |+++|+|.+++.....                .+++..++.++.||+.||.|||+++|+|||||               +
T Consensus       167 ~~~~~~L~~~l~~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl  230 (373)
T 2x4f_A          167 YVDGGELFDRIIDESY----------------NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKI  230 (373)
T ss_dssp             CCTTCEEHHHHHHTGG----------------GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEE
T ss_pred             CCCCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEE
Confidence            9999999999976432                38999999999999999999999999999995               7


Q ss_pred             cCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......  ....||+.|+|||++.+..++.++||.
T Consensus       231 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  272 (373)
T 2x4f_A          231 IDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMW  272 (373)
T ss_dssp             CCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHH
T ss_pred             EeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHH
Confidence            8999998754433  456799999999999999999999974

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=1.1e-31  Score=237.60  Aligned_cols=161  Identities=19%  Similarity=0.183  Sum_probs=141.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..+|+|++.... .....+.+.+|+.+++.+ +||||+++++++.+++..++|||
T Consensus        17 ~~LG~G~fg~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           17 EELGKGAFSVVRRCVKV-----LAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             EEEEEC--CEEEEEEET-----TTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEeccCCCeEEEEEEEC-----CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEEEEEEE
Confidence            38999999999999987     678999999997643 334557799999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||                
T Consensus        91 ~~~gg~L~~~i~~~~~-----------------~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vk  153 (444)
T 3soa_A           91 LVTGGELFEDIVAREY-----------------YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVK  153 (444)
T ss_dssp             CCBCCBHHHHHHHCSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEE
T ss_pred             eCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEE
Confidence            9999999999988665                 9999999999999999999999999999995                


Q ss_pred             ccCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||+++......   ....||+.|+|||++.+..|+.++||.
T Consensus       154 L~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIw  197 (444)
T 3soa_A          154 LADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW  197 (444)
T ss_dssp             ECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             EccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccH
Confidence            78999997654432   357899999999999999999999974

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=1.5e-31  Score=227.89  Aligned_cols=161  Identities=25%  Similarity=0.349  Sum_probs=141.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ..||+|+||.||+|...     .++..||+|+++.....     ...+.+.+|+.+++.+ +||||+++++++.+.+..+
T Consensus        17 ~~lG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           17 EELGSGQFAVVKKCREK-----STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             EEEECCSSEEEEEEEET-----TTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             eEEeeCCCeEEEEEEEC-----CCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEE
Confidence            38999999999999987     57899999999754321     1356799999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+++|+|.+++.....                 +++..++.++.||+.||.|||+++|+|||||            
T Consensus        91 lv~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~  153 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKES-----------------LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVP  153 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSC-----------------CBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSS
T ss_pred             EEEEcCCCCCHHHHHHhcCC-----------------cCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCC
Confidence            99999999999999976554                 9999999999999999999999999999985            


Q ss_pred             -----ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                           ++|||+++......  ....||+.|+|||++.+..++.++||.
T Consensus       154 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  201 (326)
T 2y0a_A          154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW  201 (326)
T ss_dssp             SCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHH
T ss_pred             CCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHH
Confidence                 78999998754332  467899999999999999999999974

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.97  E-value=4.7e-32  Score=234.64  Aligned_cols=174  Identities=22%  Similarity=0.315  Sum_probs=144.9

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.+.+.....++..||||+++..........+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e  154 (367)
T 3l9p_A           76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLE  154 (367)
T ss_dssp             EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCEEEEE
Confidence            44799999999999997654344567899999998766677777899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+++|+|.+++......          ......+++..++.++.||+.||.|||++||+|||||                
T Consensus       155 ~~~~g~L~~~l~~~~~~----------~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~k  224 (367)
T 3l9p_A          155 LMAGGDLKSFLRETRPR----------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK  224 (367)
T ss_dssp             CCTTEEHHHHHHHHSCC----------SSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             eCCCCCHHHHHHhhccc----------cCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEE
Confidence            99999999999986531          1122348999999999999999999999999999995                


Q ss_pred             ccCCCcceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||+++.....     .....+|+.|+|||++.+..++.++||.
T Consensus       225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw  270 (367)
T 3l9p_A          225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW  270 (367)
T ss_dssp             ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHH
Confidence            7799998753222     2356778999999999999999999974

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=5.5e-32  Score=235.32  Aligned_cols=160  Identities=19%  Similarity=0.336  Sum_probs=140.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||++...     .++..||+|++....  .......+.+|+.+++.+ +||||+++++++.+.+.+++|||
T Consensus        22 ~LG~G~fG~V~~~~~~-----~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv~e   95 (384)
T 4fr4_A           22 AIGKGSFGKVCIVQKN-----DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVD   95 (384)
T ss_dssp             EEECCTTCCEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEeeCCCeEEEEEEEC-----CCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEe
Confidence            8999999999999987     678999999996421  122346789999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                 +++..++.|+.||+.||.|||++||+|||||             |+|
T Consensus        96 ~~~gg~L~~~l~~~~~-----------------l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~D  158 (384)
T 4fr4_A           96 LLLGGDLRYHLQQNVH-----------------FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITD  158 (384)
T ss_dssp             CCTTEEHHHHHHTTCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             cCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEec
Confidence            9999999999987655                 9999999999999999999999999999996             789


Q ss_pred             CCcceeeeccC--Ccccccccccccccccc---CCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRN---QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~---~~~s~~~Dv~  255 (258)
                      ||+++......  ...+||+.|+|||++.+   ..|+.++||.
T Consensus       159 FG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~Diw  201 (384)
T 4fr4_A          159 FNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWW  201 (384)
T ss_dssp             CTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHH
T ss_pred             cceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceee
Confidence            99998654433  57789999999999974   4689999974

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=1.2e-31  Score=228.30  Aligned_cols=158  Identities=16%  Similarity=0.162  Sum_probs=124.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||||++...    ....+.+|+.+++.+.+||||+++++++.+....++||||
T Consensus        17 ~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~   87 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHK-----KSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMEL   87 (325)
T ss_dssp             CCSEEETTEEEEEEEET-----TTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred             CccccCCCeEEEEEEEC-----CCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEc
Confidence            47999999999999987     57899999999642    3456789999999995599999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------c
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------F  215 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i  215 (258)
                      +++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||                +
T Consensus        88 ~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl  150 (325)
T 3kn6_A           88 LNGGELFERIKKKKH-----------------FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKI  150 (325)
T ss_dssp             CCSCBHHHHHHHCSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEE
T ss_pred             cCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEE
Confidence            999999999988655                 9999999999999999999999999999995                7


Q ss_pred             cCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......   ....||+.|+|||++.+..++.++||.
T Consensus       151 ~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw  193 (325)
T 3kn6_A          151 IDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLW  193 (325)
T ss_dssp             CCCTTCEECCC----------------------CCCCHHHHHH
T ss_pred             eccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchH
Confidence            8999998644332   466789999999999999999999974

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=1.6e-31  Score=229.97  Aligned_cols=165  Identities=21%  Similarity=0.260  Sum_probs=140.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC----ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH----SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ..||+|+||.||+|...     .+++.||||+++...    .....+.+.+|+.+++.+ +||||+++++++.+++.+++
T Consensus        30 ~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           30 EVIGKGPFSVVRRCINR-----ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred             eEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEE
Confidence            38999999999999987     678999999985321    112356799999999999 99999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+++|+|.+++.....             ....+++..+..++.||+.||.|||+++|+|||||             
T Consensus       104 v~e~~~g~~L~~~l~~~~~-------------~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~  170 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRAD-------------AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSA  170 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHH-------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTC
T ss_pred             EEeCCCCCCHHHHHHHhcc-------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCC
Confidence            9999999999988876432             11348999999999999999999999999999995             


Q ss_pred             ---ccCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++......   ....||+.|+|||++.+..++.++||.
T Consensus       171 ~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  217 (351)
T 3c0i_A          171 PVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW  217 (351)
T ss_dssp             CEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             cEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhH
Confidence               78999998654432   356899999999999999999999974

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=7.9e-32  Score=229.32  Aligned_cols=160  Identities=20%  Similarity=0.306  Sum_probs=137.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||||++.........+.+.+|+.+++.+ +||||+++++++.+++..++||||+
T Consensus        14 ~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~   87 (323)
T 3tki_A           14 TLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYC   87 (323)
T ss_dssp             EEEEETTEEEEEEEET-----TTCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEecCCCEEEEEEEEC-----CCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEEcC
Confidence            8999999999999987     578999999997654444456789999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||             ++|||
T Consensus        88 ~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  150 (323)
T 3tki_A           88 SGGELFDRIEPDIG-----------------MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG  150 (323)
T ss_dssp             TTEEGGGGSBTTTB-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             CCCcHHHHHhhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEee
Confidence            99999999876544                 9999999999999999999999999999995             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccCCC-Cccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                      +++......     ....||+.|+|||++.+..+ +.++||.
T Consensus       151 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  192 (323)
T 3tki_A          151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW  192 (323)
T ss_dssp             TCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHH
T ss_pred             ccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHH
Confidence            998654332     36789999999999988776 7889974

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=3.9e-32  Score=239.98  Aligned_cols=164  Identities=18%  Similarity=0.204  Sum_probs=139.3

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ...+||+|+||.||+|...     .+++.||+|+++...  .......+.+|..++..+ +||||++++++|.+.+.+++
T Consensus        78 ~~~~LG~G~fG~V~~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~l  151 (437)
T 4aw2_A           78 ILKVIGRGAFGEVAVVKLK-----NADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYL  151 (437)
T ss_dssp             EEEEEEECSSEEEEEEEET-----TTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEEeCCCEEEEEEEEc-----CCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEE
Confidence            3448999999999999997     578999999996421  111123488999999999 99999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+++|+|.+++.....                .+++..++.|+.||+.||.|||+++|+|||||             
T Consensus       152 V~Ey~~gg~L~~~l~~~~~----------------~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vk  215 (437)
T 4aw2_A          152 VMDYYVGGDLLTLLSKFED----------------RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIR  215 (437)
T ss_dssp             EECCCTTCBHHHHHHTTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             EEecCCCCcHHHHHHHccC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEE
Confidence            9999999999999987432                29999999999999999999999999999996             


Q ss_pred             ccCCCcceeeeccC----Cccccccccccccccc-----cCCCCccccee
Q psy12228        215 FIGFDLCILVFFHD----STLLKTTSTIASLILR-----NQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~-----~~~~s~~~Dv~  255 (258)
                      |+|||+++......    ...+||+.|+|||++.     ...|+.++||.
T Consensus       216 L~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~Dvw  265 (437)
T 4aw2_A          216 LADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWW  265 (437)
T ss_dssp             ECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHH
T ss_pred             EcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeH
Confidence            78999998654432    3468999999999997     56789999974

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=228.39  Aligned_cols=165  Identities=24%  Similarity=0.250  Sum_probs=140.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|....  ....+..||||+++........+.+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        55 ~~lG~G~~g~V~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~  131 (325)
T 3kul_A           55 KIIGSGDSGEVCYGRLRV--PGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEY  131 (325)
T ss_dssp             EEEEETTTEEEEEEEECC--TTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCCEEEEEC
T ss_pred             eEEEeCCCcEEEEEEEec--CCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCccEEEeeC
Confidence            389999999999999862  11245679999998776777778899999999999 999999999999999899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..++.++.|++.||.|||+++|+|||||             ++||
T Consensus       132 ~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  195 (325)
T 3kul_A          132 MENGSLDTFLRTHDG----------------QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDF  195 (325)
T ss_dssp             CTTCBHHHHHHTTTT----------------CSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             CCCCcHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCC
Confidence            999999999976532                38999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......      ....+|+.|+|||++.+..++.++||.
T Consensus       196 g~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  238 (325)
T 3kul_A          196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVW  238 (325)
T ss_dssp             SSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHH
T ss_pred             CcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHH
Confidence            9998654332      234456789999999999999999974

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=2.6e-32  Score=239.25  Aligned_cols=162  Identities=19%  Similarity=0.240  Sum_probs=138.5

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ...+||+|+||.||+|...     .++..||+|+++...  .....+.+.+|+.+++.+ +||||+++++++.+.+.+++
T Consensus        73 ~~~~LG~G~fG~V~~~~~~-----~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~l  146 (410)
T 3v8s_A           73 VVKVIGRGAFGEVQLVRHK-----STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYM  146 (410)
T ss_dssp             EEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEEcCCCEEEEEEEEC-----CCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEE
Confidence            3448999999999999987     578999999996421  011123478999999999 99999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+++|+|.+++....                  +++..++.++.||+.||.|||++||+|||||             
T Consensus       147 V~E~~~gg~L~~~l~~~~------------------~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ik  208 (410)
T 3v8s_A          147 VMEYMPGGDLVNLMSNYD------------------VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK  208 (410)
T ss_dssp             EECCCTTEEHHHHHHHCC------------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             EEeCCCCCcHHHHHHcCC------------------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEE
Confidence            999999999999997642                  8999999999999999999999999999996             


Q ss_pred             ccCCCcceeeeccC----CccccccccccccccccCC----CCccccee
Q psy12228        215 FIGFDLCILVFFHD----STLLKTTSTIASLILRNQK----VSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~----~s~~~Dv~  255 (258)
                      |+|||+++......    ...+||+.|+|||++.+..    |+.++||.
T Consensus       209 L~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~Diw  257 (410)
T 3v8s_A          209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW  257 (410)
T ss_dssp             ECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHH
T ss_pred             EeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEe
Confidence            78999998654432    4678999999999998765    88999973

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.97  E-value=4e-31  Score=224.27  Aligned_cols=163  Identities=18%  Similarity=0.235  Sum_probs=140.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC--cEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~--~~~lv~e  150 (258)
                      +||+|+||.||+|...     .++..||||+++........+.+.+|+.+++.+ +||||+++++++....  ..++|||
T Consensus        16 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e   89 (319)
T 4euu_A           16 ILGQGATANVFRGRHK-----KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIME   89 (319)
T ss_dssp             EEEECSSEEEEEEEET-----TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             EecCCCCeEEEEEEEC-----CCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCceEEEEEe
Confidence            8999999999999987     578999999997543344457788999999999 9999999999998755  7899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+++|+|.+++.....              ...+++..++.++.||+.||.|||++||+|||||                
T Consensus        90 ~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  155 (319)
T 4euu_A           90 FCPCGSLYTVLEEPSN--------------AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVY  155 (319)
T ss_dssp             CCTTCBHHHHHHSGGG--------------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEE
T ss_pred             CCCCCCHHHHHHHhcc--------------ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceE
Confidence            9999999999987543              1338999999999999999999999999999995                


Q ss_pred             -ccCCCcceeeeccC--Cccccccccccccccc--------cCCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD--STLLKTTSTIASLILR--------NQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~--------~~~~s~~~Dv~  255 (258)
                       ++|||+++......  ....||+.|+|||++.        +..++.++||.
T Consensus       156 kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Diw  207 (319)
T 4euu_A          156 KLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLW  207 (319)
T ss_dssp             EECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHH
T ss_pred             EEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHH
Confidence             78999998654443  4567999999999986        57889999974

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.97  E-value=2.8e-31  Score=227.01  Aligned_cols=183  Identities=28%  Similarity=0.359  Sum_probs=145.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...+.....++..||||+++........+.+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~  131 (343)
T 1luf_A           53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEY  131 (343)
T ss_dssp             EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCCceEEEEec
Confidence            3899999999999998743333567899999998766666678899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCC-------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESP-------LGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +++|+|.+++............       ..........+++..++.++.||+.||.|||++||+|||||          
T Consensus       132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~  211 (343)
T 1luf_A          132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM  211 (343)
T ss_dssp             CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCC
Confidence            9999999999875421000000       00000112459999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++.....     .....+|+.|+|||++.+..++.++||.
T Consensus       212 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  260 (343)
T 1luf_A          212 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVW  260 (343)
T ss_dssp             CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             eEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccH
Confidence               7899998754322     2356778999999999999999999974

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=2.5e-31  Score=226.00  Aligned_cols=159  Identities=21%  Similarity=0.300  Sum_probs=140.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .+++.||||++... .....+.+.+|+.+++.+ +||||+++++++...+..++||||
T Consensus        51 ~~lg~G~~g~V~~a~~~-----~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  123 (321)
T 2c30_A           51 VKIGEGSTGIVCLAREK-----HSGRQVAVKMMDLR-KQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEF  123 (321)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEETT-TCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEECC
T ss_pred             EEeccCCCeEEEEEEEC-----CCCcEEEEEEEecc-chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEec
Confidence            37999999999999987     57899999999764 333456789999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++....                  +++..+..++.|++.||.|||++||+|||||             ++||
T Consensus       124 ~~~~~L~~~l~~~~------------------l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  185 (321)
T 2c30_A          124 LQGGALTDIVSQVR------------------LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDF  185 (321)
T ss_dssp             CCSCBHHHHHTTCC------------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCC
T ss_pred             CCCCCHHHHHHhcC------------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeee
Confidence            99999999986532                  8999999999999999999999999999995             7899


Q ss_pred             Ccceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++......   .....||+.|+|||++.+..++.++||.
T Consensus       186 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~  225 (321)
T 2c30_A          186 GFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIW  225 (321)
T ss_dssp             TTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             eeeeecccCccccccccCCccccCHhhhcCCCCCchhhHH
Confidence            999865433   2466899999999999999999999974

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.5e-30  Score=226.34  Aligned_cols=183  Identities=44%  Similarity=0.619  Sum_probs=149.0

Q ss_pred             eeeeecCceEEEEEEEcccc--cCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGIL--KQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...+..  ....+..||||+++..........+.+|+.+++.+.+||||+++++++.+++..++||
T Consensus        75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~  154 (382)
T 3tt0_A           75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV  154 (382)
T ss_dssp             EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEE
Confidence            48999999999999975322  1245678999999877677777889999999999988999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++...... +..............+++..++.|+.||+.||.|||+++|+|||||             |+
T Consensus       155 e~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~  233 (382)
T 3tt0_A          155 EYASKGNLREYLQARRPP-GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA  233 (382)
T ss_dssp             ECCTTCBHHHHHHHTCCS-SSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             EecCCCcHHHHHHHhccc-ccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEc
Confidence            999999999999886531 1111111122233459999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....     .....+|+.|+|||++.+..++.++||.
T Consensus       234 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw  277 (382)
T 3tt0_A          234 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW  277 (382)
T ss_dssp             SCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHH
T ss_pred             ccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHH
Confidence            99999865332     2345677899999999999999999974

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.97  E-value=4.5e-32  Score=235.53  Aligned_cols=163  Identities=25%  Similarity=0.302  Sum_probs=141.5

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.+.     .++..||||+++........+.|.+|+.+|+.+ +||||+++++++.+.+..++|||
T Consensus       119 ~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          119 GEQIGRGNFGEVFSGRLR-----ADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             EEEEEEETTEEEEEEEET-----TTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEeccCCCCeEEEEEEe-----cCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEEEEE
Confidence            348999999999999997     577899999998765666667899999999999 99999999999999889999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..+..++.||+.||.|||+++|+|||||             ++|
T Consensus       193 ~~~~g~L~~~l~~~~~----------------~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~D  256 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEGA----------------RLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISD  256 (377)
T ss_dssp             CCTTCBHHHHHHHHGG----------------GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             cCCCCCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECc
Confidence            9999999999987542                38999999999999999999999999999995             889


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....+++.|+|||++.+..++.++||.
T Consensus       257 fG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  299 (377)
T 3cbl_A          257 FGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVW  299 (377)
T ss_dssp             GGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHH
T ss_pred             CCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHH
Confidence            99998643221     223356789999999999999999974

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=3.1e-31  Score=230.93  Aligned_cols=161  Identities=18%  Similarity=0.246  Sum_probs=142.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|++... .......+.+|+.+|+.+ +||||+++++++.+.+..++||||
T Consensus        57 ~~LG~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           57 EELGSGAFGVVHRCVEK-----ATGRVFVAKFINTP-YPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEecCCCEEEEEEEEC-----CCCCEEEEEEeccc-chhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEEEEEEEc
Confidence            38999999999999987     57899999999765 344556799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------cc
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------FI  216 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------i~  216 (258)
                      +++|+|.+++.....                .+++..++.++.||+.||.|||++||+|||||               ++
T Consensus       130 ~~gg~L~~~l~~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~  193 (387)
T 1kob_A          130 LSGGELFDRIAAEDY----------------KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKII  193 (387)
T ss_dssp             CCCCBHHHHTTCTTC----------------CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEEC
T ss_pred             CCCCcHHHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEE
Confidence            999999999976432                38999999999999999999999999999995               78


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++......  ....||+.|+|||++.+..++.++||.
T Consensus       194 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  234 (387)
T 1kob_A          194 DFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMW  234 (387)
T ss_dssp             CCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHH
T ss_pred             ecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEe
Confidence            999998754433  356899999999999999999999974

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=1.1e-31  Score=232.80  Aligned_cols=160  Identities=24%  Similarity=0.313  Sum_probs=131.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHH-HHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEM-MKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~-l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .||+|+||.||+|+.+     .++..||||+++...  .......+..|..+ ++.+ +||||+++++++.+.+.+++||
T Consensus        45 ~lG~G~fg~V~~~~~~-----~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~~~~~~lv~  118 (373)
T 2r5t_A           45 VIGKGSFGKVLLARHK-----AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVL  118 (373)
T ss_dssp             EEECCTTCEEEEEEET-----TTCCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEeeCCCeEEEEEEEc-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEeCCEEEEEE
Confidence            8999999999999987     578999999996532  22344567778776 4667 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||             ++
T Consensus       119 E~~~gg~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~  181 (373)
T 2r5t_A          119 DYINGGELFYHLQRERC-----------------FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLT  181 (373)
T ss_dssp             ECCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred             eCCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEe
Confidence            99999999999988765                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeec---cCCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFF---HDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++....   .....+||+.|+|||++.+..|+.++||.
T Consensus       182 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  223 (373)
T 2r5t_A          182 DFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWW  223 (373)
T ss_dssp             CCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHH
T ss_pred             eCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhH
Confidence            9999975322   23577899999999999999999999974

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=3.1e-31  Score=227.99  Aligned_cols=158  Identities=20%  Similarity=0.229  Sum_probs=125.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .+++.||||+++...   ..+.+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        59 ~~lG~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           59 SELGRGATSIVYRCKQK-----GTQKPYALKVLKKTV---DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEC-------------CHHHHHC-CCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEeeCCCEEEEEEEEC-----CCCcEEEEEEeccch---hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeEEEEEEe
Confidence            38999999999999987     577899999998542   345688999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------c
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------F  215 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i  215 (258)
                      +++|+|.+++.....                 +++..++.++.||+.||.|||+++|+|||||                +
T Consensus       130 ~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl  192 (349)
T 2w4o_A          130 VTGGELFDRIVEKGY-----------------YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKI  192 (349)
T ss_dssp             CCSCBHHHHHTTCSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEE
T ss_pred             CCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEE
Confidence            999999999987554                 8999999999999999999999999999995                7


Q ss_pred             cCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......  ....||+.|+|||++.+..++.++||.
T Consensus       193 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  234 (349)
T 2w4o_A          193 ADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMW  234 (349)
T ss_dssp             CCCC----------------CGGGSCHHHHTTCCCCTHHHHH
T ss_pred             ccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchH
Confidence            8999988654332  467899999999999999999999974

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=1e-31  Score=235.71  Aligned_cols=163  Identities=14%  Similarity=0.144  Sum_probs=139.8

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..+||+|+||.||++..+     .+++.||||+++...  .....+.+.+|..++..+ +||||+++++++.+.+.+++|
T Consensus        66 ~~~lG~G~fG~V~~~~~~-----~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV  139 (412)
T 2vd5_A           66 LKVIGRGAFSEVAVVKMK-----QTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLV  139 (412)
T ss_dssp             EEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEE
Confidence            348999999999999987     678999999996421  112234588999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++.+.+.                .+++..++.++.||+.||.|||++||+|||||             +
T Consensus       140 mE~~~gg~L~~~l~~~~~----------------~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL  203 (412)
T 2vd5_A          140 MEYYVGGDLLTLLSKFGE----------------RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRL  203 (412)
T ss_dssp             ECCCCSCBHHHHHHHHSS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             EcCCCCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEE
Confidence            999999999999987642                29999999999999999999999999999996             8


Q ss_pred             cCCCcceeeeccC----Cccccccccccccccc-------cCCCCccccee
Q psy12228        216 IGFDLCILVFFHD----STLLKTTSTIASLILR-------NQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~-------~~~~s~~~Dv~  255 (258)
                      +|||+++......    ...+||+.|+|||++.       +..|+.++||.
T Consensus       204 ~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~Diw  254 (412)
T 2vd5_A          204 ADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW  254 (412)
T ss_dssp             CCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHH
T ss_pred             eechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhh
Confidence            8999998754432    3568999999999997       45789999974

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=4.4e-31  Score=225.03  Aligned_cols=163  Identities=20%  Similarity=0.262  Sum_probs=131.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .||+|+||.||++....  ...++..||+|+++...   .......+.+|+.+++.+ +||||+++++++.+.+.+++||
T Consensus        24 ~lG~G~~g~V~~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~  100 (327)
T 3a62_A           24 VLGKGGYGKVFQVRKVT--GANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGGKLYLIL  100 (327)
T ss_dssp             EEEEETTEEEEEEEECS--STTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSSCEEEEE
T ss_pred             EEEeCCCEEEEEEEEec--cCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCCEEEEEE
Confidence            89999999999998741  12467899999997642   223446688999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||             ++
T Consensus       101 e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~  163 (327)
T 3a62_A          101 EYLSGGELFMQLEREGI-----------------FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLT  163 (327)
T ss_dssp             ECCTTEEHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEEC
T ss_pred             eCCCCCcHHHHHHhCCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEE
Confidence            99999999999988765                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....   .....||+.|+|||++.+..++.++||.
T Consensus       164 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  205 (327)
T 3a62_A          164 DFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWW  205 (327)
T ss_dssp             CCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHH
T ss_pred             eCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccch
Confidence            99998754322   2466899999999999999999999974

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=5.8e-31  Score=222.66  Aligned_cols=162  Identities=28%  Similarity=0.395  Sum_probs=131.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...       +..||||++.... .....+.+.+|+.+++++ +||||+++++++.+.+..++|||
T Consensus        43 ~~lG~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e  114 (309)
T 3p86_A           43 EKIGAGSFGTVHRAEWH-------GSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTE  114 (309)
T ss_dssp             EEEEECSSEEEEEEEET-------TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEEEEE
T ss_pred             eEeecCCCeEEEEEEEC-------CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEEEEe
Confidence            38999999999999875       3789999997543 445567899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--ccccCcc-------------c
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK--VGNDAVR-------------F  215 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--iiH~DlK-------------i  215 (258)
                      |+++|+|.+++.....              ...+++..++.++.||+.||.|||++|  |+|||||             +
T Consensus       115 ~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL  180 (309)
T 3p86_A          115 YLSRGSLYRLLHKSGA--------------REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV  180 (309)
T ss_dssp             CCTTCBHHHHHHSTTH--------------HHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEE
T ss_pred             cCCCCcHHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEE
Confidence            9999999999986542              123899999999999999999999999  9999995             7


Q ss_pred             cCCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++.....   .....||+.|+|||++.+..++.++||.
T Consensus       181 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  223 (309)
T 3p86_A          181 CDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVY  223 (309)
T ss_dssp             CCCC-----------------CCTTSCHHHHTTCCCCTTHHHH
T ss_pred             CCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHH
Confidence            899999754333   2467899999999999999999999974

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.97  E-value=7e-32  Score=229.11  Aligned_cols=178  Identities=20%  Similarity=0.304  Sum_probs=147.5

Q ss_pred             ceeeeeceeeec-cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccce
Q psy12228         57 VSLINVLTVTIN-SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL  135 (258)
Q Consensus        57 ~~~~~~~~~~~~-~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l  135 (258)
                      +.+.++...+.+ .....||+|+||.||+|...      ++..||||++... .....+.+.+|+.+++.+ +||||+++
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~  100 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR------DGAKVALKRRTPE-SSQGIEEFETEIETLSFC-RHPHLVSL  100 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT------TCCEEEEEECCSC-CSSHHHHHHHHHHGGGSC-CCTTBCCE
T ss_pred             ecHHHHHHHHhccCccceeecCCCeeEEEEEEC------CCCEEEEEEeccc-ChHHHHHHHHHHHHHHhC-CCCCEeeE
Confidence            444455555544 55668999999999999964      5689999998765 344567899999999999 99999999


Q ss_pred             eeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-
Q psy12228        136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-  214 (258)
Q Consensus       136 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-  214 (258)
                      ++++.+.+..++||||+++|+|.+++.....             ....+++..++.++.|++.||.|||++||+||||| 
T Consensus       101 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp  167 (321)
T 2qkw_B          101 IGFCDERNEMILIYKYMENGNLKRHLYGSDL-------------PTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKS  167 (321)
T ss_dssp             EEECCCTTCCEEEEECCTTCBTGGGSSSSCC-------------CSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCS
T ss_pred             EEEEcCCCeEEEEEEcCCCCcHHHHHhccCC-------------CccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCH
Confidence            9999999999999999999999999876542             12348999999999999999999999999999995 


Q ss_pred             ------------ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 ------------FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ------------i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                  ++|||+++......     ....||+.|+|||++.+..++.++||.
T Consensus       168 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  225 (321)
T 2qkw_B          168 INILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVY  225 (321)
T ss_dssp             TTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHH
T ss_pred             HHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchH
Confidence                        78999998643222     345689999999999999999999974

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.97  E-value=2.2e-31  Score=230.02  Aligned_cols=169  Identities=12%  Similarity=0.133  Sum_probs=136.5

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcC---CCcccceeeeEEcCCcEE
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ---HINIINLLGVCTQDGPLY  146 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~---h~nIv~l~~~~~~~~~~~  146 (258)
                      ...+||+|+||.||+|.........+++.||||+++.. .   ...+..|+.++..+ +   |+||+.+++++...+..+
T Consensus        69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~---~~~~~~e~~~~~~l-~~~~~~~iv~~~~~~~~~~~~~  143 (365)
T 3e7e_A           69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-N---PWEFYIGTQLMERL-KPSMQHMFMKFYSAHLFQNGSV  143 (365)
T ss_dssp             EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-C---HHHHHHHHHHHHHS-CGGGGGGBCCEEEEEECSSCEE
T ss_pred             EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-C---hhHHHHHHHHHHHh-hhhhhhhhhhhheeeecCCCcE
Confidence            34479999999999996432222256789999999764 2   34577888888888 5   899999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+++|+|.+++......            ....+++..++.|+.||+.||.|||+++|+|||||            
T Consensus       144 lv~e~~~~g~L~~~l~~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~  211 (365)
T 3e7e_A          144 LVGELYSYGTLLNAINLYKNT------------PEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLE  211 (365)
T ss_dssp             EEECCCCSCBHHHHHHHHHTS------------TTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTC
T ss_pred             EEEeccCCCcHHHHHHHhhcc------------cccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccC
Confidence            999999999999999864320            12349999999999999999999999999999986            


Q ss_pred             ------------ccCCCcceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        215 ------------FIGFDLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ------------i~dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                  |+|||+++.....     ....+||+.|+|||++.+..|+.++||.
T Consensus       212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  269 (365)
T 3e7e_A          212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYF  269 (365)
T ss_dssp             C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHH
T ss_pred             ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHH
Confidence                        5699999764322     1466899999999999999999999984

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.97  E-value=8.2e-31  Score=221.22  Aligned_cols=184  Identities=33%  Similarity=0.426  Sum_probs=146.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...+.....++..||+|+++........+.+.+|+.+++.+++||||+++++++.+++..++||||
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~  108 (313)
T 1t46_A           29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY  108 (313)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEec
Confidence            38999999999999975433446789999999987656666788999999999998899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPL-GSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      +++|+|.+++............. .........+++..++.++.||+.||.|||++||+|||||             ++|
T Consensus       109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D  188 (313)
T 1t46_A          109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD  188 (313)
T ss_dssp             CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECC
T ss_pred             CCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcc
Confidence            99999999998765310000000 0000122358999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......     ....+|+.|+|||++.+..++.++||.
T Consensus       189 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  231 (313)
T 1t46_A          189 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW  231 (313)
T ss_dssp             CGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             ccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHH
Confidence            99998654332     245567889999999999999999974

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.97  E-value=2.9e-31  Score=230.19  Aligned_cols=168  Identities=25%  Similarity=0.313  Sum_probs=134.0

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      .....||+|+||.||+|....  ....+..||||+++........+.|.+|+.+++++ +||||+++++++.+.+..++|
T Consensus        48 ~~~~~lG~G~fg~Vy~~~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           48 SIDKVVGAGEFGEVCSGRLKL--PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             CCCEEEEECSSSEEEEC-CBC--TTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEE
T ss_pred             eeeeEEeeCCCeEEEEEEEec--CCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCceEEE
Confidence            344589999999999998751  12356789999998766667778899999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++.....                .+++..++.++.||+.||.|||+++|+|||||             +
T Consensus       125 ~e~~~~~sL~~~l~~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl  188 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDA----------------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV  188 (373)
T ss_dssp             EECCTTCBHHHHHHTTTT----------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             EeCCCCCcHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEE
Confidence            999999999999987542                38999999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......      ....+++.|+|||++.+..++.++||.
T Consensus       189 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  234 (373)
T 2qol_A          189 SDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW  234 (373)
T ss_dssp             CCC----------------------CTTSCHHHHHHCCCCHHHHHH
T ss_pred             CcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHH
Confidence            8999998654332      122346789999999999999999984

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=8.2e-32  Score=238.77  Aligned_cols=162  Identities=21%  Similarity=0.265  Sum_probs=132.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCC--CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...||+|+||.||+|...     .++..||||+++..  ........+.+|+.+++.+ +||||+++++++.+.+.+++|
T Consensus       153 ~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          153 LKLLGKGTFGKVILVKEK-----ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             EEEEEEETTEEEEEEEET-----TTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEEEE
T ss_pred             eEEEeeCcCEEEEEEEEc-----CCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEEEE
Confidence            448999999999999987     67899999999642  1333456788999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-------------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-------------  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-------------  214 (258)
                      |||+++|+|.+++.....                 +++..+..++.||+.||.|||+ +||+|||||             
T Consensus       227 ~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~k  289 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERV-----------------FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIK  289 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSC-----------------CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEE
T ss_pred             EeeCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEE
Confidence            999999999999988765                 9999999999999999999998 999999995             


Q ss_pred             ccCCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+|||+++.....   ....+||+.|+|||++.+..|+.++||.
T Consensus       290 l~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  333 (446)
T 4ejn_A          290 ITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW  333 (446)
T ss_dssp             ECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHH
T ss_pred             EccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchh
Confidence            7899999753222   2567899999999999999999999974

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=3.1e-31  Score=227.45  Aligned_cols=157  Identities=20%  Similarity=0.267  Sum_probs=137.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|..+     .++..||||+++....     ...+|++++.++.+||||+++++++.+++..++||||
T Consensus        28 ~~lG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   97 (342)
T 2qr7_A           28 EDIGVGSYSVCKRCIHK-----ATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL   97 (342)
T ss_dssp             EEEEECSSEEEEEEEET-----TTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence            38999999999999987     5789999999976432     2346888888886899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------------  214 (258)
                      +++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||                 
T Consensus        98 ~~gg~L~~~i~~~~~-----------------~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~k  160 (342)
T 2qr7_A           98 MKGGELLDKILRQKF-----------------FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIR  160 (342)
T ss_dssp             CCSCBHHHHHHTCTT-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEE
T ss_pred             CCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEE
Confidence            999999999987654                 9999999999999999999999999999985                 


Q ss_pred             ccCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||+++......   ...+||+.|+|||++.+..|+.++||.
T Consensus       161 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  204 (342)
T 2qr7_A          161 ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIW  204 (342)
T ss_dssp             ECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred             EEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCee
Confidence            78999998654432   467889999999999988899999974

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.97  E-value=8.2e-31  Score=232.67  Aligned_cols=159  Identities=26%  Similarity=0.368  Sum_probs=135.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-cEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-PLYVIV  149 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-~~~lv~  149 (258)
                      ...||+|+||.||+|.+.       +..||||+++...   ..+.|.+|+.+|+++ +||||+++++++.... ..++||
T Consensus       198 ~~~lG~G~fg~V~~~~~~-------~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          198 LQTIGKGEFGDVMLGDYR-------GNKVAVKCIKNDA---TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             EEEEEECSSEEEEEEEET-------TEEEEEEEESSCT---TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEEEEE
T ss_pred             EeeecCcCCeeEEEEEec-------CCeEEEEEeCCch---HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceEEEE
Confidence            448999999999999886       3689999998642   346799999999999 9999999999987665 799999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....               ..+++..++.++.||+.||.|||+++|+|||||             ++
T Consensus       267 e~~~~g~L~~~l~~~~~---------------~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~  331 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGR---------------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS  331 (450)
T ss_dssp             ECCTTCBHHHHHHHHCT---------------TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEEC
T ss_pred             EecCCCcHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEe
Confidence            99999999999997653               337999999999999999999999999999995             88


Q ss_pred             CCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++..........+++.|+|||++.+..++.++||.
T Consensus       332 DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvw  370 (450)
T 1k9a_A          332 DFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW  370 (450)
T ss_dssp             CCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHH
T ss_pred             eCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHH
Confidence            999998655444555778999999999999999999974

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.97  E-value=8.9e-31  Score=221.30  Aligned_cols=182  Identities=36%  Similarity=0.510  Sum_probs=144.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-cEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-PLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-~~~lv~e~  151 (258)
                      .||+|+||.||+|...+.....++..||||+++........+.+.+|+.++..+.+||||+++++++...+ ..++||||
T Consensus        34 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~  113 (316)
T 2xir_A           34 PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF  113 (316)
T ss_dssp             EEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEEC
T ss_pred             EEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEc
Confidence            89999999999999764334467899999999876666677789999999999977999999999998754 58999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++........ .............+++..++.++.|++.||.|||++||+|||||             ++||
T Consensus       114 ~~~~~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Df  192 (316)
T 2xir_A          114 CKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF  192 (316)
T ss_dssp             CTTEEHHHHHHTCTTSEE-CC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred             CCCCcHHHHHHhcccccc-cccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCC
Confidence            999999999987543100 00000000112338999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......     ....+|+.|+|||++.+..++.++||.
T Consensus       193 g~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  234 (316)
T 2xir_A          193 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW  234 (316)
T ss_dssp             GGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             ccccccccCccceeccCCCcceeecCchhhccccccchhHHH
Confidence            9997543322     345678899999999999999999974

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=3e-31  Score=240.42  Aligned_cols=164  Identities=14%  Similarity=0.183  Sum_probs=142.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..+||+|+||.||+|...     .++..||+|++....  .......+.+|+.+|+.+ +||||+++++++.+.+.+++|
T Consensus       189 ~~~LG~G~fG~Vy~a~~~-----~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          189 YRVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             EEEEEEETTEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEEE
Confidence            448999999999999987     578999999996421  112345688999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++.....               ..+++..++.++.||+.||.|||++||+|||||             |
T Consensus       263 mEy~~gg~L~~~l~~~~~---------------~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL  327 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQ---------------AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRI  327 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSS---------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             EEcCCCCcHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEE
Confidence            999999999999987543               338999999999999999999999999999995             8


Q ss_pred             cCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......  ...+||+.|+|||++.+..|+.++||.
T Consensus       328 ~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~Diw  369 (576)
T 2acx_A          328 SDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWW  369 (576)
T ss_dssp             CCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHH
T ss_pred             EecccceecccCccccccCCCccccCHHHHcCCCCCccchHH
Confidence            8999998765443  456899999999999999999999974

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=2.4e-30  Score=215.55  Aligned_cols=161  Identities=19%  Similarity=0.220  Sum_probs=142.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|++.... .....+.+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        12 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e   85 (284)
T 3kk8_A           12 EELGKGAFSVVRRCVHK-----TTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFD   85 (284)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhhcCcCCeEEEEEEEc-----CCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEEEEEe
Confidence            38999999999999987     578899999996532 455667899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+++|+|.+++.....                 +++..+..++.|++.||.|||++||+|||||                
T Consensus        86 ~~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~k  148 (284)
T 3kk8_A           86 LVTGGELFEDIVAREF-----------------YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK  148 (284)
T ss_dssp             CCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEE
T ss_pred             cCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEE
Confidence            9999999999988765                 9999999999999999999999999999985                


Q ss_pred             ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||++.......  ....||+.|+|||++.+..++.++||.
T Consensus       149 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  191 (284)
T 3kk8_A          149 LADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW  191 (284)
T ss_dssp             ECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             EeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchH
Confidence            78999997654433  356899999999999999999999974

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=7.4e-31  Score=229.63  Aligned_cols=158  Identities=20%  Similarity=0.221  Sum_probs=129.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPLYV  147 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~~l  147 (258)
                      .+||+|+||.||+|...     .++..||||+++..      ..+.+|+.++.++.+||||+++++++..    ...++|
T Consensus        68 ~~LG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNK-----RTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             ceeeeccCeEEEEEEEC-----CCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            47999999999999987     67899999999742      3467889888666599999999999875    557899


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+++|+|.+++.....               ..+++..+..|+.||+.||.|||++||+|||||             
T Consensus       137 v~E~~~gg~L~~~l~~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~  201 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDRGD---------------QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA  201 (400)
T ss_dssp             EEECCCSEEHHHHHHCC------------------CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTC
T ss_pred             EEEeCCCCcHHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCc
Confidence            9999999999999987542               348999999999999999999999999999995             


Q ss_pred             ---ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         |+|||+++......  ...+||+.|+|||++.+..|+.++||.
T Consensus       202 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  247 (400)
T 1nxk_A          202 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW  247 (400)
T ss_dssp             CEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHH
T ss_pred             cEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHH
Confidence               78999998654332  467889999999999999999999974

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=4.1e-31  Score=228.27  Aligned_cols=158  Identities=20%  Similarity=0.233  Sum_probs=130.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...     .++..||||++.....  ..+.+.+|+.+++.+ +||||+++++++.+.+..++||||+
T Consensus        27 ~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~   98 (361)
T 3uc3_A           27 DIGSGNFGVARLMRDK-----LTKELVAVKYIERGAA--IDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYA   98 (361)
T ss_dssp             EESSSTTSSEEEEEET-----TTCCEEEEEEEESSTT--SCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EeccCCCEEEEEEEEC-----CCCcEEEEEEEecCcc--ccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEEEEEEeC
Confidence            8999999999999987     6789999999976422  234688999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------ccC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------FIG  217 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------i~d  217 (258)
                      ++|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||               ++|
T Consensus        99 ~~~~L~~~l~~~~~-----------------~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~D  161 (361)
T 3uc3_A           99 SGGELYERICNAGR-----------------FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICD  161 (361)
T ss_dssp             CSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECC
T ss_pred             CCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEee
Confidence            99999999988765                 9999999999999999999999999999985               789


Q ss_pred             CCcceeeecc--CCccccccccccccccccCCCCcc-ccee
Q psy12228        218 FDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVL-LDLI  255 (258)
Q Consensus       218 fgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~-~Dv~  255 (258)
                      ||+++.....  .....||+.|+|||++.+..++.+ +||.
T Consensus       162 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  202 (361)
T 3uc3_A          162 FGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVW  202 (361)
T ss_dssp             CCCC---------------CTTSCHHHHHCSSCCHHHHHHH
T ss_pred             cCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeee
Confidence            9998743322  256789999999999998888655 8874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=3.2e-30  Score=218.16  Aligned_cols=161  Identities=16%  Similarity=0.135  Sum_probs=135.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .+||+|+||.||+|...     .+++.||||++.... .......+..|+..+..+.+||||++++++|.+++..++|||
T Consensus        63 ~~LG~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e  137 (311)
T 3p1a_A           63 SRLGHGSYGEVFKVRSK-----EDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE  137 (311)
T ss_dssp             EEEEEETTEEEEEEEET-----TTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             heeccCCCeEEEEEEEC-----CCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence            38999999999999987     578999999986543 344556677777777776699999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+ +|+|.+++.....                .+++..++.++.||+.||.|||+++|+|||||             ++|
T Consensus       138 ~~-~~~L~~~~~~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~D  200 (311)
T 3p1a_A          138 LC-GPSLQQHCEAWGA----------------SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGD  200 (311)
T ss_dssp             CC-CCBHHHHHHHHCS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECC
T ss_pred             cc-CCCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEcc
Confidence            99 5699999987653                39999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......  ....||+.|+|||++.+ .++.++||.
T Consensus       201 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Diw  239 (311)
T 3p1a_A          201 FGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVF  239 (311)
T ss_dssp             CTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHH
T ss_pred             ceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHH
Confidence            99988654332  45679999999999987 799999974

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=2.8e-31  Score=224.53  Aligned_cols=160  Identities=16%  Similarity=0.240  Sum_probs=133.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc----EE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP----LY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~----~~  146 (258)
                      .||+|+||.||+|...     .++..||||+++...  .......+.+|+.+++.+ +||||+++++++.....    .+
T Consensus        19 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~   92 (311)
T 3ork_A           19 ILGFGGMSEVHLARDL-----RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPY   92 (311)
T ss_dssp             EEEECSSEEEEEEEET-----TTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEETTEEEEE
T ss_pred             EEccCCCEEEEEEEEC-----CCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCCCCcccE
Confidence            8999999999999987     578999999997643  334457799999999999 99999999999876543    49


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+++|+|.+++.....                 +++..++.++.|++.||.|||+++|+|||||            
T Consensus        93 lv~e~~~g~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~  155 (311)
T 3ork_A           93 IVMEYVDGVTLRDIVHTEGP-----------------MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV  155 (311)
T ss_dssp             EEEECCCEEEHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCE
T ss_pred             EEEecCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCE
Confidence            99999999999999988765                 9999999999999999999999999999995            


Q ss_pred             -ccCCCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||+++......      ....||+.|+|||++.+..++.++||.
T Consensus       156 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  203 (311)
T 3ork_A          156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY  203 (311)
T ss_dssp             EECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHH
T ss_pred             EEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHH
Confidence             78999998654322      346789999999999999999999974

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=1.1e-30  Score=218.77  Aligned_cols=161  Identities=21%  Similarity=0.264  Sum_probs=137.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|+++... .......+.+|+.+++.+ +||||+++++++.+++..++|||
T Consensus         8 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            8 EKIGEGTYGTVFKAKNR-----ETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             EEEEECSSSEEEEEEET-----TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eEecCCCCeEEEEEEEC-----CCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEEEe
Confidence            38999999999999987     578999999997543 334457789999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++ +|.+++.....                .+++..+..++.|++.||.|||++||+|||||             ++|
T Consensus        82 ~~~~-~l~~~~~~~~~----------------~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~D  144 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNG----------------DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLAN  144 (292)
T ss_dssp             CCSE-EHHHHHHHTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             cCCC-CHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEee
Confidence            9986 77777765432                29999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCC-CCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQK-VSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~-~s~~~Dv~  255 (258)
                      ||+++......   ....||+.|+|||++.+.. ++.++||.
T Consensus       145 fg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  186 (292)
T 3o0g_A          145 FGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW  186 (292)
T ss_dssp             CTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHH
T ss_pred             cccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHH
Confidence            99998654332   4568899999999998766 79999974

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=8.7e-31  Score=224.20  Aligned_cols=185  Identities=36%  Similarity=0.481  Sum_probs=141.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|...+.....++..||+|+++........+.+.+|+.++..+.+||||+++++++...+..++|||
T Consensus        50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e  129 (344)
T 1rjb_A           50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE  129 (344)
T ss_dssp             EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence            34899999999999998543334577899999998654455567899999999999789999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCC------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESP------LGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      |+++|+|.+++............      ..........+++..++.++.||+.||.|||++||+|||||          
T Consensus       130 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~  209 (344)
T 1rjb_A          130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK  209 (344)
T ss_dssp             CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTT
T ss_pred             cCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCC
Confidence            99999999999875431000000      00000112348999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||++.......     ....+|+.|+|||++.+..++.++||.
T Consensus       210 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  258 (344)
T 1rjb_A          210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW  258 (344)
T ss_dssp             EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             cEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHH
Confidence               78999998654332     245667889999999999999999974

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=2.2e-30  Score=223.11  Aligned_cols=162  Identities=16%  Similarity=0.194  Sum_probs=141.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhc----CCCcccceeeeEEcCCcEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG----QHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~nIv~l~~~~~~~~~~~  146 (258)
                      ..+||+|+||.||+|...     .++..||||+++.  .......+..|+.+++.+.    .||||+++++++...+..+
T Consensus        40 ~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~  112 (360)
T 3llt_A           40 IRKMGDGTFGRVLLCQHI-----DNKKYYAVKVVRN--IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC  112 (360)
T ss_dssp             EEEEEECSSEEEEEEEET-----TTCCEEEEEEECS--CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred             EEEEcccCCeEEEEEEEC-----CCCeEEEEEEecc--chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence            348999999999999987     5778999999975  3455567888999999993    3999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+ +++|.+++.....               ..+++..++.++.||+.||.|||++||+|||||            
T Consensus       113 lv~e~~-~~~L~~~~~~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~  176 (360)
T 3llt_A          113 LIFEPL-GPSLYEIITRNNY---------------NGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFE  176 (360)
T ss_dssp             EEECCC-CCBHHHHHHHTTT---------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCC
T ss_pred             EEEcCC-CCCHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccc
Confidence            999999 8899999987653               348999999999999999999999999999985            


Q ss_pred             --------------------------ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 --------------------------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --------------------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                                ++|||+++..........||+.|+|||++.+..++.++||.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  243 (360)
T 3llt_A          177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMW  243 (360)
T ss_dssp             EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHH
T ss_pred             ccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchH
Confidence                                      46888888655555678899999999999999999999974

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=6.1e-31  Score=237.52  Aligned_cols=166  Identities=14%  Similarity=0.187  Sum_probs=142.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..+||+|+||.||+|...     .+++.||+|+++...  .......+.+|+.+++.+ +||||+++++++.+...+++|
T Consensus       190 ~~~LG~G~fG~Vy~a~~~-----~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          190 FRVLGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             EEEEEECSSSEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEeeCCCeEEEEEEEC-----CCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEE
Confidence            347999999999999987     578999999996421  112346788999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+++|+|.+++.....             ....+++..++.++.||+.||.|||++||+|||||             +
T Consensus       264 mE~~~gg~L~~~l~~~~~-------------~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL  330 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDE-------------DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI  330 (543)
T ss_dssp             ECCCTTCBHHHHHHTSST-------------TSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             EEeccCCCHHHHHHHhhc-------------ccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEE
Confidence            999999999999987542             12349999999999999999999999999999995             7


Q ss_pred             cCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......   ...+||+.|+|||++.+..|+.++||.
T Consensus       331 ~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~Diw  373 (543)
T 3c4z_A          331 SDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF  373 (543)
T ss_dssp             CCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHH
T ss_pred             eecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcC
Confidence            8999998754433   346899999999999999999999974

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.97  E-value=3.4e-31  Score=237.70  Aligned_cols=162  Identities=30%  Similarity=0.390  Sum_probs=140.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.+.     .++..||||+++...  ...+.|.+|+.+|+.+ +||||++++++|.+.+..+||||
T Consensus       225 ~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          225 KHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             EEESGGGTTSSEEEEEEG-----GGTEEEEEEECCSSS--SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEecCCCCeEEEEEEEc-----CCCeEEEEEEecCcc--cchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEEEEE
Confidence            448999999999999997     567899999998642  2356799999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.++|.....               ..+++..++.++.||+.||.|||+++|+|||||             |+|
T Consensus       297 ~~~~g~L~~~l~~~~~---------------~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~D  361 (495)
T 1opk_A          297 FMTYGNLLDYLRECNR---------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVAD  361 (495)
T ss_dssp             CCTTCBHHHHHHHSCT---------------TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECC
T ss_pred             ccCCCCHHHHHHhcCc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEee
Confidence            9999999999987543               348999999999999999999999999999995             889


Q ss_pred             CCcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......    ....+++.|+|||++.+..++.++||.
T Consensus       362 FG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvw  403 (495)
T 1opk_A          362 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW  403 (495)
T ss_dssp             TTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHH
T ss_pred             cccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHH
Confidence            99998653322    234556789999999999999999974

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=1.9e-30  Score=233.31  Aligned_cols=160  Identities=22%  Similarity=0.326  Sum_probs=137.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh------------HHHHHHHHHHHHHHHhcCCCcccceeeeE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD------------AEMMDLVSEMEMMKMIGQHINIINLLGVC  139 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~~h~nIv~l~~~~  139 (258)
                      ..||+|+||.||+|...     .++..||+|+++.....            ...+.+.+|+.+++.+ +||||+++++++
T Consensus        42 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~  115 (504)
T 3q5i_A           42 RKLGSGAYGEVLLCKEK-----NGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVF  115 (504)
T ss_dssp             EEEEC--CEEEEEEEET-----TTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             eEecccCCeEEEEEEEC-----CCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCeEEEEE
Confidence            38999999999999987     57889999999754211            2346789999999999 999999999999


Q ss_pred             EcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----
Q psy12228        140 TQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----  214 (258)
Q Consensus       140 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----  214 (258)
                      .+....++|||||++|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||     
T Consensus       116 ~~~~~~~lv~e~~~gg~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil  178 (504)
T 3q5i_A          116 EDKKYFYLVTEFYEGGELFEQIINRHK-----------------FDECDAANIMKQILSGICYLHKHNIVHRDIKPENIL  178 (504)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             EcCCEEEEEEecCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEE
Confidence            999999999999999999999988765                 9999999999999999999999999999995     


Q ss_pred             -----------ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 -----------FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----------i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                 ++|||++.......  ....||+.|+|||++.+ .++.++||.
T Consensus       179 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Diw  231 (504)
T 3q5i_A          179 LENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVW  231 (504)
T ss_dssp             ESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHH
T ss_pred             EecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHH
Confidence                       78999998654432  46789999999999875 699999974

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=2.4e-31  Score=227.58  Aligned_cols=160  Identities=21%  Similarity=0.291  Sum_probs=138.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|++.....  ......+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus        15 ~~lG~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B           15 ETLGEGSFGKVKLATHY-----KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEecCCCeEEEEEEEC-----CCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEE
Confidence            38999999999999987     5789999999964211  11235688999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+ +|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||             ++
T Consensus        89 E~~-~g~l~~~l~~~~~-----------------l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  150 (336)
T 3h4j_B           89 EYA-GGELFDYIVEKKR-----------------MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIA  150 (336)
T ss_dssp             CCC-CEEHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEEC
T ss_pred             ECC-CCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEE
Confidence            999 6799999988765                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCC-Cccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                      |||++.......  ...+||+.|+|||++.+..+ ++++||.
T Consensus       151 DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  192 (336)
T 3h4j_B          151 DFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVW  192 (336)
T ss_dssp             CSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHH
T ss_pred             EeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchh
Confidence            999998654332  56789999999999998887 7889974

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.97  E-value=1.4e-30  Score=219.95  Aligned_cols=182  Identities=36%  Similarity=0.457  Sum_probs=145.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.........++..||+|+++........+.+.+|+.+++.+ +||||+++++++.+.+..++||||+
T Consensus        30 ~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~  108 (314)
T 2ivs_A           30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYA  108 (314)
T ss_dssp             EEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCCceEEEEeec
Confidence            899999999999998533333567899999998766677778899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCC-------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        153 PHGNLRDFLRKHRPSSGYESP-------LGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++|+|.+++............       ..........+++..++.++.||+.||.|||++||+|||||           
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~  188 (314)
T 2ivs_A          109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK  188 (314)
T ss_dssp             TTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTE
T ss_pred             CCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCC
Confidence            999999999875431000000       00000112348999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        ++|||+++......     ....+|+.|+|||++.+..++.++||.
T Consensus       189 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  236 (314)
T 2ivs_A          189 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVW  236 (314)
T ss_dssp             EEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHH
T ss_pred             EEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHH
Confidence              78999998654332     345667889999999999999999974

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.97  E-value=1e-31  Score=228.30  Aligned_cols=179  Identities=26%  Similarity=0.329  Sum_probs=145.4

Q ss_pred             ceeeeeceeeec-cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccce
Q psy12228         57 VSLINVLTVTIN-SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL  135 (258)
Q Consensus        57 ~~~~~~~~~~~~-~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l  135 (258)
                      +++.++.....+ .....||+|+||.||+|...      ++..||||+++..........+.+|+.+++.+ +||||+++
T Consensus        20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~   92 (326)
T 3uim_A           20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLA------DGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRL   92 (326)
T ss_dssp             CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS------SSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCC
T ss_pred             ecHHHHHHHhhccccceeEecCCCcEEEEEEec------CCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccce
Confidence            344444444433 44558999999999999754      56889999997654333334689999999999 99999999


Q ss_pred             eeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC---CccccC
Q psy12228        136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR---KVGNDA  212 (258)
Q Consensus       136 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~iiH~D  212 (258)
                      ++++.+.+..++||||+++|+|.+++.....             ....+++..+..++.|++.||.|||++   ||+|||
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~D  159 (326)
T 3uim_A           93 RGFCMTPTERLLVYPYMANGSVASCLRERPE-------------SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRD  159 (326)
T ss_dssp             CEEECCSSCCEEEEECCTTCBHHHHHHCCST-------------TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCC
T ss_pred             EEEEecCCceEEEEEeccCCCHHHHHHhccc-------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCC
Confidence            9999999999999999999999999987543             224589999999999999999999999   999999


Q ss_pred             cc-------------ccCCCcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        213 VR-------------FIGFDLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       213 lK-------------i~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||             ++|||+++......    ....||+.|+|||++.+..++.++||.
T Consensus       160 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  219 (326)
T 3uim_A          160 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVF  219 (326)
T ss_dssp             CSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHH
T ss_pred             CchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccch
Confidence            95             78999998654332    345699999999999998999999974

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.97  E-value=8.2e-31  Score=219.77  Aligned_cols=164  Identities=28%  Similarity=0.401  Sum_probs=136.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv~e  150 (258)
                      .||+|+||.||+|.+.. ....++..||||++... .....+.+.+|+.+++.+ +||||+++++++...  ...++|||
T Consensus        17 ~lg~G~~g~V~~~~~~~-~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e   93 (295)
T 3ugc_A           17 QLGKGNFGSVEMCRYDP-LQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME   93 (295)
T ss_dssp             EEEECSSEEEEEEEECT-TCSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred             eeeccCCEEEEEEEEec-ccCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCCceEEEEE
Confidence            89999999999998631 12257799999999864 556667899999999999 999999999999653  46899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..++.++.|++.||.|||+++|+|||||             ++|
T Consensus        94 ~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~D  157 (295)
T 3ugc_A           94 YLPYGSLRDYLQKHKE----------------RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD  157 (295)
T ss_dssp             CCTTCBHHHHHHHCGG----------------GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC
T ss_pred             eCCCCCHHHHHHhccc----------------ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEcc
Confidence            9999999999987542                38999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......      ....++..|+|||++.+..++.++||.
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  201 (295)
T 3ugc_A          158 FGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVW  201 (295)
T ss_dssp             CCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHH
T ss_pred             CcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHH
Confidence            99998654332      244567789999999999999999984

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.97  E-value=2.1e-30  Score=220.86  Aligned_cols=182  Identities=32%  Similarity=0.424  Sum_probs=145.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|...+.........||+|.++........+.+.+|+.+++.+++||||+++++++.+.+..++|||
T Consensus        51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e  130 (333)
T 2i1m_A           51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE  130 (333)
T ss_dssp             EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence            34899999999999998743333445689999998766666778899999999999779999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++...........   ...-....+++..++.++.||+.||.|||++||+|||||             ++|
T Consensus       131 ~~~~g~L~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~D  207 (333)
T 2i1m_A          131 YCCYGDLLNFLRRKSRVLETDP---AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGD  207 (333)
T ss_dssp             CCTTEEHHHHHHHHHHHHSCC----------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCC
T ss_pred             cCCCCcHHHHHHHhcccccccc---cccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECc
Confidence            9999999999986431000000   000001348999999999999999999999999999995             889


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....+|+.|+|||++.+..++.++||.
T Consensus       208 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  250 (333)
T 2i1m_A          208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW  250 (333)
T ss_dssp             CGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHH
T ss_pred             cccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHH
Confidence            99998643332     345567889999999999999999974

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=1.9e-30  Score=220.27  Aligned_cols=161  Identities=22%  Similarity=0.322  Sum_probs=141.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ..||+|+||.||+|...     .++..||+|+++.....     ...+.+.+|+.+++.+ +||||+++++++.+.+..+
T Consensus        18 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           18 EELGSGQFAIVKKCREK-----STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             eEeeecCCEEEEEEEEC-----CCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEE
Confidence            38999999999999987     57899999999754321     1356799999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+++|+|.+++.....                 +++..++.++.|++.||.|||++||+|||||            
T Consensus        92 lv~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~  154 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQKES-----------------LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP  154 (321)
T ss_dssp             EEECCCCSCBHHHHHHTCSC-----------------EEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSS
T ss_pred             EEEEcCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCC
Confidence            99999999999999987554                 8999999999999999999999999999985            


Q ss_pred             -----ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                           ++|||++.......  ....||+.|+|||++.+..++.++||.
T Consensus       155 ~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  202 (321)
T 2a2a_A          155 IPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW  202 (321)
T ss_dssp             SCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHH
T ss_pred             cCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccH
Confidence                 78999998654432  456799999999999999999999974

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=2.3e-30  Score=215.01  Aligned_cols=159  Identities=20%  Similarity=0.252  Sum_probs=139.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|++.... ....+.+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        15 ~~lg~G~~g~V~~~~~~-----~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A           15 NTIGRGSWGEVKIAVQK-----GTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEeecCCEEEEEEEeC-----CCCcEEEEEeehhhc-cchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEEEEec
Confidence            38999999999999987     577899999997542 23356799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------c
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------F  215 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i  215 (258)
                      +++++|.+++.....                 +++..+..++.|++.||.|||++||+|||||                +
T Consensus        88 ~~~~~L~~~~~~~~~-----------------~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l  150 (277)
T 3f3z_A           88 CTGGELFERVVHKRV-----------------FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKL  150 (277)
T ss_dssp             CCSCBHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEE
T ss_pred             cCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEE
Confidence            999999999988765                 9999999999999999999999999999995                6


Q ss_pred             cCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||++.......  ....||+.|+|||++.+ .++.++||.
T Consensus       151 ~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~  191 (277)
T 3f3z_A          151 IDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEW  191 (277)
T ss_dssp             CCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTTHHHH
T ss_pred             EecccceeccCccchhccCCCCCccChHHhcc-cCCchhheh
Confidence            7999998654433  46789999999999876 489999974

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=1.5e-30  Score=215.36  Aligned_cols=158  Identities=24%  Similarity=0.371  Sum_probs=136.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...      ++..||+|++.....  ..+.+.+|+.+++++ +||||+++++++.+++..++||||+
T Consensus        17 ~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A           17 EIGSGQFGLVHLGYWL------NKDKVAIKTIREGAM--SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             EEEECSSCEEEEEEET------TTEEEEEEEECTTSB--CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             eecCCCccEEEEEEec------CCCeEEEEEeccccc--CHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEEEEEeC
Confidence            8999999999999985      457799999986432  235689999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..++.++.|++.||.|||+++|+|||||             ++|||
T Consensus        88 ~~~~L~~~l~~~~~----------------~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  151 (269)
T 4hcu_A           88 EHGCLSDYLRTQRG----------------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG  151 (269)
T ss_dssp             TTCBHHHHHHTTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTT
T ss_pred             CCCcHHHHHHhcCc----------------ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccc
Confidence            99999999976543                38999999999999999999999999999995             78999


Q ss_pred             cceeeecc----CCccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFH----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++.....    .....+|+.|+|||++.+..++.++||.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  191 (269)
T 4hcu_A          152 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW  191 (269)
T ss_dssp             GGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             ccccccccccccccCcccccccCCHHHhcCCCCCchhhhH
Confidence            99754332    2345667889999999999999999974

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.97  E-value=1.8e-30  Score=220.24  Aligned_cols=177  Identities=25%  Similarity=0.348  Sum_probs=144.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|...+.....++..||+|.+...........+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  108 (322)
T 1p4o_A           30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIME  108 (322)
T ss_dssp             EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccCCccEEEEE
Confidence            34899999999999998643344567899999998765666677899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++........       .......+++..++.++.||+.||.|||++||+|||||             ++|
T Consensus       109 ~~~~~~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~D  181 (322)
T 1p4o_A          109 LMTRGDLKSYLRSLRPAMA-------NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD  181 (322)
T ss_dssp             CCTTCBHHHHHHHHHHHHH-------HCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECC
T ss_pred             eCCCCcHHHHHHHhchhhc-------cCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECc
Confidence            9999999999986431000       00001237999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....+|+.|+|||++.+..++.++||.
T Consensus       182 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  224 (322)
T 1p4o_A          182 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW  224 (322)
T ss_dssp             TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             CccccccccccccccccCCCCCCCccChhhhccCCCCchhhHH
Confidence            99987543322     244667899999999999999999974

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=7.7e-31  Score=221.91  Aligned_cols=160  Identities=18%  Similarity=0.224  Sum_probs=134.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||+|...     .++..||||+++.. .......+.+|+.++.++.+||||+++++++.+++..++||||+
T Consensus        20 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   93 (316)
T 2ac3_A           20 VLGEGAHARVQTCINL-----ITSQEYAVKIIEKQ-PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM   93 (316)
T ss_dssp             CCCCCSSEEEEEEECS-----SSCCEEEEEEEECC-SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eecCCceEEEEEEEEc-----CCCcEEEEEEEeeC-cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcC
Confidence            7899999999999986     57789999999765 33445678999999999648999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------cc
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------FI  216 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i~  216 (258)
                      ++|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||                ++
T Consensus        94 ~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~  156 (316)
T 2ac3_A           94 RGGSILSHIHKRRH-----------------FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKIC  156 (316)
T ss_dssp             TTCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEEC
T ss_pred             CCCcHHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEE
Confidence            99999999988765                 8999999999999999999999999999985                78


Q ss_pred             CCCcceeeecc----------CCcccccccccccccccc-----CCCCccccee
Q psy12228        217 GFDLCILVFFH----------DSTLLKTTSTIASLILRN-----QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~----------~~~~~gt~~y~aPE~~~~-----~~~s~~~Dv~  255 (258)
                      |||++......          .....||+.|+|||++.+     ..++.++||.
T Consensus       157 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw  210 (316)
T 2ac3_A          157 DFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLW  210 (316)
T ss_dssp             CTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHH
T ss_pred             EccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccH
Confidence            99998754321          124569999999999975     5688999974

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.97  E-value=1.1e-30  Score=232.20  Aligned_cols=160  Identities=18%  Similarity=0.263  Sum_probs=125.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-----CcE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-----GPL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-----~~~  145 (258)
                      .+||+|+||.||+|...     .++..||||++.... .....+++.+|+.+|+.+ +||||+++++++...     ..+
T Consensus        59 ~~lG~G~~g~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           59 HLIGTGSYGHVCEAYDK-----LEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             CC-------CEEEEEEC-----C--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCE
T ss_pred             eEeeecCCeEEEEEEEC-----CCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcccCceE
Confidence            38999999999999987     578999999996543 344567899999999999 999999999999543     469


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++||||+. |+|.+++.....                 +++..++.|+.||+.||.|||++||+|||||           
T Consensus       133 ~lv~e~~~-~~L~~~~~~~~~-----------------l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~  194 (458)
T 3rp9_A          133 YVVLEIAD-SDFKKLFRTPVY-----------------LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCS  194 (458)
T ss_dssp             EEEECCCS-EEHHHHHHSSCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCC
T ss_pred             EEEEeccc-cchhhhcccCCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCC
Confidence            99999985 699999987654                 9999999999999999999999999999996           


Q ss_pred             --ccCCCcceeeecc------------------------------CCcccccccccccccc-ccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFH------------------------------DSTLLKTTSTIASLIL-RNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~------------------------------~~~~~gt~~y~aPE~~-~~~~~s~~~Dv~  255 (258)
                        |+|||+++.....                              ....+||+.|+|||++ .+..|+.++||.
T Consensus       195 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~Diw  268 (458)
T 3rp9_A          195 VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVW  268 (458)
T ss_dssp             EEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHH
T ss_pred             EeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHH
Confidence              7899999864321                              1345789999999986 566799999974

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=3.7e-30  Score=224.19  Aligned_cols=162  Identities=19%  Similarity=0.216  Sum_probs=140.3

Q ss_pred             eeeec--CceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         73 VKIKC--AFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G--~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      +||+|  +||.||+|...     .++..||||+++... .....+.+.+|+.+++.+ +||||+++++++.+++.+++||
T Consensus        32 ~lG~G~~~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  105 (389)
T 3gni_B           32 VIGKGFEDLMTVNLARYK-----PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVT  105 (389)
T ss_dssp             EEEEETTTTEEEEEEEET-----TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccCCcCCceEEEEEEEc-----CCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEEEEE
Confidence            89999  99999999997     578999999997543 345567788999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....               ..+++..+..++.||+.||.|||+++|+|||||             ++
T Consensus       106 e~~~~~~L~~~l~~~~~---------------~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~  170 (389)
T 3gni_B          106 SFMAYGSAKDLICTHFM---------------DGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS  170 (389)
T ss_dssp             ECCTTCBHHHHHHHTCT---------------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEEC
T ss_pred             EccCCCCHHHHHhhhcc---------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEc
Confidence            99999999999987632               238999999999999999999999999999996             78


Q ss_pred             CCCcceeeecc----------CCcccccccccccccccc--CCCCccccee
Q psy12228        217 GFDLCILVFFH----------DSTLLKTTSTIASLILRN--QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~----------~~~~~gt~~y~aPE~~~~--~~~s~~~Dv~  255 (258)
                      |||++......          .....||+.|+|||++.+  ..++.++||.
T Consensus       171 dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw  221 (389)
T 3gni_B          171 GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY  221 (389)
T ss_dssp             CGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHH
T ss_pred             ccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHH
Confidence            99987653222          134588999999999988  6889999974

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=4.1e-31  Score=245.04  Aligned_cols=164  Identities=23%  Similarity=0.318  Sum_probs=143.0

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ...+||+|+||.||+|...     .+++.||||+++...  .....+.+..|..++..+.+||||+.+++++.+.+.++|
T Consensus       345 ~~~~LG~G~fG~V~~~~~~-----~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          345 FLMVLGKGSFGKVMLSERK-----GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             EEEESSBTTTBCEEEEEES-----SSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             EEEEEccCCCEEEEEEEEC-----CCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            3447999999999999988     578899999997421  122346688999999988789999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+++|+|.+++...+.                 +++..++.|+.||+.||.|||++||||||||             
T Consensus       420 V~E~~~gg~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ik  482 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQVGR-----------------FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIK  482 (674)
T ss_dssp             EEECCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEE
T ss_pred             EEeCcCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEE
Confidence            9999999999999998765                 9999999999999999999999999999996             


Q ss_pred             ccCCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+|||+++.....   ....+||+.|+|||++.+..|+.++||.
T Consensus       483 L~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~Dvw  526 (674)
T 3pfq_A          483 IADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWW  526 (674)
T ss_dssp             ECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHH
T ss_pred             EeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEe
Confidence            7899999864322   2567899999999999999999999974

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=5.5e-31  Score=234.85  Aligned_cols=161  Identities=21%  Similarity=0.285  Sum_probs=140.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||||+++...  .......+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus        22 ~~LG~G~fg~V~~a~~~-----~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           22 DTLGVGTFGKVKVGKHE-----LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             EEEECCSSSCEEEEEET-----TTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEeeCCCeEEEEEEEC-----CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEE
Confidence            38999999999999987     578999999996431  112346789999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++...+.                 +++..++.++.||+.||.|||++||+|||||             ++
T Consensus        96 E~~~gg~L~~~l~~~~~-----------------l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~  158 (476)
T 2y94_A           96 EYVSGGELFDYICKNGR-----------------LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIA  158 (476)
T ss_dssp             ECCSSEEHHHHTTSSSS-----------------CCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             eCCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEE
Confidence            99999999999986554                 9999999999999999999999999999995             88


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCC-Cccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                      |||++.......  ...+||+.|+|||++.+..+ +.++||.
T Consensus       159 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  200 (476)
T 2y94_A          159 DFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIW  200 (476)
T ss_dssp             CCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHH
T ss_pred             eccchhhccccccccccCCCcCeEChhhccCCCCCCCcceeh
Confidence            999998755433  46789999999999998876 7889974

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=2.5e-30  Score=220.44  Aligned_cols=159  Identities=18%  Similarity=0.111  Sum_probs=137.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||||++.....   .+.+.+|+.+++.+.+||||+++++++...+..++||||
T Consensus        15 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A           15 KKIGCGNFGELRLGKNL-----YTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             EECCC-CTTSEEEEEET-----TTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             EEeeccCCceEEEEEEC-----CCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            38999999999999986     5789999999975422   235889999999998899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------------  214 (258)
                      + +|+|.+++.....                .+++..++.++.||+.||.|||++||+|||||                 
T Consensus        87 ~-~~~L~~~~~~~~~----------------~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~  149 (330)
T 2izr_A           87 L-GPSLEDLFDLCDR----------------TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVI  149 (330)
T ss_dssp             C-CCBHHHHHHHTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSE
T ss_pred             C-CCCHHHHHHHcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceE
Confidence            9 8899999987532                39999999999999999999999999999985                 


Q ss_pred             -ccCCCcceeeeccC----------CccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD----------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||+++......          ....||+.|+|||++.+..++.++||.
T Consensus       150 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  201 (330)
T 2izr_A          150 HIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLE  201 (330)
T ss_dssp             EECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             EEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHH
Confidence             78999998654332          367899999999999999999999974

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=1.3e-30  Score=221.19  Aligned_cols=165  Identities=18%  Similarity=0.216  Sum_probs=132.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|+++........+.+.+|+.+++.+ +||||+++++++.+++..++||||+
T Consensus        12 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~   85 (317)
T 2pmi_A           12 KLGNGTYATVYKGLNK-----TTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLVFEFM   85 (317)
T ss_dssp             -------CEEEEEECS-----SSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEEEECC
T ss_pred             EECCCCCEEEEEEEEC-----CCCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEEEEec
Confidence            8999999999999987     578999999997654444456788999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      + |+|.+++......           .....+++..+..++.||+.||.|||++||+|||||             ++|||
T Consensus        86 ~-~~L~~~l~~~~~~-----------~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  153 (317)
T 2pmi_A           86 D-NDLKKYMDSRTVG-----------NTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFG  153 (317)
T ss_dssp             C-CBHHHHHHHHHSS-----------SCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCS
T ss_pred             C-CCHHHHHHhcccc-----------ccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCc
Confidence            8 5999999865320           012348999999999999999999999999999995             78999


Q ss_pred             cceeeecc---CCcccccccccccccccc-CCCCccccee
Q psy12228        220 LCILVFFH---DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      +++.....   .....||+.|+|||++.+ ..++.++||.
T Consensus       154 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  193 (317)
T 2pmi_A          154 LARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIW  193 (317)
T ss_dssp             SCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHH
T ss_pred             cceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHH
Confidence            99865432   245688999999999976 4689999974

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=1.9e-30  Score=232.88  Aligned_cols=160  Identities=22%  Similarity=0.311  Sum_probs=136.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|+++... .......+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        43 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           43 KKLGSGAYGEVLLCRDK-----VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             EEEECC---EEEEEEET-----TTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEecCCCEEEEEEEEC-----CCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEe
Confidence            38999999999999987     578999999997542 223346789999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      ||++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||                
T Consensus       117 ~~~~g~L~~~~~~~~~-----------------~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~k  179 (494)
T 3lij_A          117 CYKGGELFDEIIHRMK-----------------FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIK  179 (494)
T ss_dssp             CCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEE
T ss_pred             cCCCCcHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEE
Confidence            9999999999988765                 9999999999999999999999999999995                


Q ss_pred             ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||+++......  ....||+.|+|||++.+ .|+.++||.
T Consensus       180 l~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~Diw  221 (494)
T 3lij_A          180 IVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVW  221 (494)
T ss_dssp             ECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTT-CBCTHHHHH
T ss_pred             EEECCCCeECCCCccccccCCCcCeeCHHHHcc-cCCCchhHH
Confidence            78999998655433  46789999999999875 799999974

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=2.6e-30  Score=216.00  Aligned_cols=163  Identities=22%  Similarity=0.329  Sum_probs=135.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||++...     .++..||+|++.........+.+.+|+.+++.+ +||||+++++++.+.+..++||||+
T Consensus        29 ~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~  102 (285)
T 3is5_A           29 KLGSGAFGDVHLVEER-----SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETC  102 (285)
T ss_dssp             EEEECSSCEEEEEEET-----TTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eeccCCCeEEEEEEEc-----cCCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCeEEEEEEeC
Confidence            8999999999999987     578899999997654444567899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------cc
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------FI  216 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i~  216 (258)
                      ++|+|.+++.....             ....+++..++.++.|++.||.|||++||+|||||                ++
T Consensus       103 ~~~~L~~~l~~~~~-------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~  169 (285)
T 3is5_A          103 EGGELLERIVSAQA-------------RGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKII  169 (285)
T ss_dssp             SCCBHHHHHHHHHH-------------HTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEEC
T ss_pred             CCCcHHHHHHhhhh-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEE
Confidence            99999999975421             01339999999999999999999999999999985                78


Q ss_pred             CCCcceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++......  .....||+.|+|||++.+ .++.++||.
T Consensus       170 Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~  209 (285)
T 3is5_A          170 DFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIW  209 (285)
T ss_dssp             CCCCCCC----------CTTGGGCCHHHHTT-CCCHHHHHH
T ss_pred             eeecceecCCcccCcCcccccCcCChHHhcc-CCCcccCee
Confidence            99999764433  246789999999999864 789999974

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.97  E-value=1.5e-30  Score=221.69  Aligned_cols=165  Identities=22%  Similarity=0.313  Sum_probs=131.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||+|.+..... ....+||+|.++........+.+.+|+.+++++ +||||++++++|.++ ..++++||
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~v~e~   97 (327)
T 3poz_A           21 KVLGSGAFGTVYKGLWIPEGE-KVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL   97 (327)
T ss_dssp             EEEEEETTEEEEEEEECC-----CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESS-SEEEEEEC
T ss_pred             eEEeeCCCeEEEEEEEcCCCc-eEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecC-CeEEEEEe
Confidence            489999999999999862110 112457999987654555667899999999999 999999999999875 47899999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..++.|+.||+.||.|||+++|+|||||             ++||
T Consensus        98 ~~~g~L~~~l~~~~~----------------~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Df  161 (327)
T 3poz_A           98 MPFGCLLDYVREHKD----------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF  161 (327)
T ss_dssp             CTTCBHHHHHHHSTT----------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCT
T ss_pred             cCCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccC
Confidence            999999999987543                38999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......     ....+|+.|+|||++.+..++.++||.
T Consensus       162 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  203 (327)
T 3poz_A          162 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW  203 (327)
T ss_dssp             THHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHH
T ss_pred             cceeEccCCcccccccCCCccccccChHHhccCCCCchhhhh
Confidence            9998643332     244567899999999999999999984

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.97  E-value=3.5e-30  Score=214.59  Aligned_cols=164  Identities=24%  Similarity=0.319  Sum_probs=129.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|....  ....+..||+|.++........+.+.+|+.+++.+ +||||+++++++. ++..++||||
T Consensus        21 ~~lg~G~~g~Vy~~~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~   96 (281)
T 1mp8_A           21 RCIGEGQFGDVHQGIYMS--PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMEL   96 (281)
T ss_dssp             EEEEECSSSEEEEEEECC--C--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred             eEeeecCCeeEEEEEEec--CCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEEc-cCccEEEEec
Confidence            389999999999999862  11245789999998765666778899999999999 9999999999984 5578999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..++.++.|++.||.|||++||+|||||             ++||
T Consensus        97 ~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Df  160 (281)
T 1mp8_A           97 CTLGELRSFLQVRKY----------------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF  160 (281)
T ss_dssp             CTTEEHHHHHHHTTT----------------TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-
T ss_pred             CCCCCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcc
Confidence            999999999987542                38999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......    ....+|+.|+|||++.+..++.++||.
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  201 (281)
T 1mp8_A          161 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW  201 (281)
T ss_dssp             ------------------CCGGGCCHHHHHHCCCSHHHHHH
T ss_pred             ccccccCcccccccccCCCcccccChhhcccCCCCCccCch
Confidence            9998654332    344567889999999999999999974

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=1.2e-30  Score=224.76  Aligned_cols=161  Identities=19%  Similarity=0.221  Sum_probs=142.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|+++........+.+.+|+.+++.+ +||||+++++++.+++..++||||
T Consensus        39 ~~lg~G~~g~V~~~~~~-----~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           39 SELGAGNGGVVFKVSHK-----PSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             EEEEECSSCEEEEEEET-----TTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEEEECC
T ss_pred             eeecCCCCeEEEEEEEC-----CCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEEEEEC
Confidence            38999999999999987     578999999998766667778899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~d  217 (258)
                      +++|+|.+++.....                 +++..+..++.|++.||.|||++ +|+|||||             ++|
T Consensus       113 ~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~D  175 (360)
T 3eqc_A          113 MDGGSLDQVLKKAGR-----------------IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD  175 (360)
T ss_dssp             CTTCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECC
T ss_pred             CCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEE
Confidence            999999999988765                 89999999999999999999996 99999995             789


Q ss_pred             CCcceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++...... .....||+.|+|||++.+..++.++||.
T Consensus       176 fg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  214 (360)
T 3eqc_A          176 FGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW  214 (360)
T ss_dssp             CCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHH
T ss_pred             CCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHH
Confidence            9998654322 3567899999999999999999999974

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=4.8e-30  Score=216.07  Aligned_cols=160  Identities=23%  Similarity=0.243  Sum_probs=137.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||++...     .+++.||+|+++.. .....+.+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        15 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A           15 EVLGSGAFSEVFLVKQR-----LTGKLFALKCIKKS-PAFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEECC-------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eeccCCCCceEEEEEEC-----CCCCEEEEEEEecc-cccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEEEEEc
Confidence            38999999999999987     57889999999864 223345688999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------c
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------F  215 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i  215 (258)
                      +++|+|.+++.....                 +++..+..++.|++.||.|||++||+|||||                +
T Consensus        88 ~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl  150 (304)
T 2jam_A           88 VSGGELFDRILERGV-----------------YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMI  150 (304)
T ss_dssp             CCSCBHHHHHHHHSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEB
T ss_pred             CCCccHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEE
Confidence            999999999987665                 8999999999999999999999999999995                6


Q ss_pred             cCCCcceeeeccC-CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||++....... ....||+.|+|||++.+..++.++||.
T Consensus       151 ~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  191 (304)
T 2jam_A          151 TDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCW  191 (304)
T ss_dssp             CSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHH
T ss_pred             ccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHH
Confidence            7899887543322 355789999999999999999999974

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=1.6e-30  Score=232.88  Aligned_cols=159  Identities=22%  Similarity=0.356  Sum_probs=138.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...     .++..||||++.... .......+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        29 ~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~  102 (486)
T 3mwu_A           29 MLGKGSFGEVLKCKDR-----ITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGEL  102 (486)
T ss_dssp             EEECCSSSEEEEEEET-----TTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEeecCCEEEEEEEEC-----CCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEEEEEEc
Confidence            8999999999999987     578999999995321 122356789999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------c
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------F  215 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i  215 (258)
                      +++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||                +
T Consensus       103 ~~~~~L~~~~~~~~~-----------------~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl  165 (486)
T 3mwu_A          103 YTGGELFDEIIKRKR-----------------FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKI  165 (486)
T ss_dssp             CCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEE
T ss_pred             CCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEE
Confidence            999999999988765                 9999999999999999999999999999995                7


Q ss_pred             cCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......  ....||+.|+|||++.+ .|+.++||.
T Consensus       166 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Diw  206 (486)
T 3mwu_A          166 IDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVW  206 (486)
T ss_dssp             CSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHH
T ss_pred             EECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHH
Confidence            8999987544332  46689999999999987 599999974

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=4.4e-30  Score=226.81  Aligned_cols=160  Identities=16%  Similarity=0.253  Sum_probs=135.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-----CcE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-----GPL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-----~~~  145 (258)
                      ..||+|+||.||+|...     .++..||||+++... .....+++.+|+.+|+.+ +||||+++++++...     ..+
T Consensus        32 ~~lG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~  105 (432)
T 3n9x_A           32 HLIGRGSYGYVYLAYDK-----NTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDEL  105 (432)
T ss_dssp             EEEEEETTEEEEEEEET-----TTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCE
T ss_pred             EEEeecCCEEEEEEEEC-----CCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCCcCCeE
Confidence            38999999999999987     678999999997543 344567899999999999 999999999999766     569


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++||||+. |+|.+++.....                 +++..+..++.||+.||.|||++||+|||||           
T Consensus       106 ~lv~e~~~-~~L~~~~~~~~~-----------------l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~  167 (432)
T 3n9x_A          106 YIVLEIAD-SDLKKLFKTPIF-----------------LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCS  167 (432)
T ss_dssp             EEEEECCS-EEHHHHHHSSCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC
T ss_pred             EEEEecCC-cCHHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCC
Confidence            99999997 599999987654                 9999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeecc-------------------------CCcccccccccccccc-ccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFH-------------------------DSTLLKTTSTIASLIL-RNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~-------------------------~~~~~gt~~y~aPE~~-~~~~~s~~~Dv~  255 (258)
                        |+|||+++.....                         ....+||+.|+|||++ ....|+.++||.
T Consensus       168 ~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~Diw  236 (432)
T 3n9x_A          168 VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIW  236 (432)
T ss_dssp             EEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHH
T ss_pred             EEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccc
Confidence              7899999865432                         1457889999999986 566799999974

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=4.5e-30  Score=217.29  Aligned_cols=160  Identities=19%  Similarity=0.255  Sum_probs=134.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...      +++.||+|+++... .......+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        27 ~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           27 EKVGEGTYGVVYKAKDS------QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             EEEEECSSCEEEEEEET------TSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCEEEEEE
T ss_pred             hhccCCCCeEEEEEEEC------CCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEEEEEEc
Confidence            38999999999999875      46899999997543 233456789999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++ +|.+++.....                .+++..+..++.|++.||.|||++||+|||||             ++|
T Consensus       100 ~~~~-~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~D  162 (311)
T 3niz_A          100 FMEK-DLKKVLDENKT----------------GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLAD  162 (311)
T ss_dssp             CCSE-EHHHHHHTCTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             CCCC-CHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEcc
Confidence            9985 89988876542                38999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ||+++......   ....+|+.|+|||++.+ ..++.++||.
T Consensus       163 fg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  204 (311)
T 3niz_A          163 FGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIW  204 (311)
T ss_dssp             CTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHH
T ss_pred             CcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhH
Confidence            99998654322   45678999999999976 5689999974

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=7.8e-30  Score=212.36  Aligned_cols=161  Identities=22%  Similarity=0.357  Sum_probs=138.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ..||+|+||.||+|...     .++..||+|+++.....     ...+.+.+|+.+++.+ +||||+++++++.+.+..+
T Consensus        11 ~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A           11 EELGSGQFAIVRKCRQK-----GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             HhhcccCceEEEEEEEc-----CCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCeEE
Confidence            38999999999999987     57899999999754211     1356799999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+++++|.+++.....                 +++..+..++.||+.||.|||++||+|||||            
T Consensus        85 lv~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~  147 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKES-----------------LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP  147 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSS
T ss_pred             EEEeecCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCC
Confidence            99999999999999987655                 9999999999999999999999999999995            


Q ss_pred             -----ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                           ++|||++.......  ....||+.|+|||++.+..++.++||.
T Consensus       148 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  195 (283)
T 3bhy_A          148 NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW  195 (283)
T ss_dssp             SCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHH
T ss_pred             CCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhh
Confidence                 78999987654332  456789999999999999999999974

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.97  E-value=3.3e-30  Score=213.08  Aligned_cols=158  Identities=25%  Similarity=0.369  Sum_probs=136.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...      .+..||+|+++....  ..+.+.+|+.++..+ +||||+++++++.+.+..++||||+
T Consensus        15 ~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A           15 ELGSGQFGVVKLGKWK------GQYDVAVKMIKEGSM--SEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             EEEEETTEEEEEEEET------TTEEEEEEEECBTTB--CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             eeccCCCceEEEEEec------CceeEEEEEeccCCC--cHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEEEEEcc
Confidence            8999999999999876      457799999976432  235689999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..++.++.|++.||.|||++||+|||||             ++|||
T Consensus        86 ~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg  149 (268)
T 3sxs_A           86 SNGCLLNYLRSHGK----------------GLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFG  149 (268)
T ss_dssp             TTCBHHHHHHHHGG----------------GCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTT
T ss_pred             CCCcHHHHHHHcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCc
Confidence            99999999987642                38999999999999999999999999999995             78999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......    ....+|+.|+|||++.+..++.++||.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  189 (268)
T 3sxs_A          150 MTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW  189 (268)
T ss_dssp             CEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHH
T ss_pred             cceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhH
Confidence            998654332    244556789999999999999999974

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.97  E-value=3.5e-30  Score=216.44  Aligned_cols=165  Identities=27%  Similarity=0.365  Sum_probs=137.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv~e  150 (258)
                      .||+|+||.||+|.+.. ....++..||+|+++........+.+.+|+.+++.+ +||||+++++++.+.  ...++|||
T Consensus        28 ~lg~G~~g~V~~~~~~~-~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e  105 (302)
T 4e5w_A           28 DLGEGHFGKVELCRYDP-EGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIME  105 (302)
T ss_dssp             EEEECSSEEEEEEEECT-TSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---CCEEEEEE
T ss_pred             ccCCCCceEEEEEEEcc-ccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCceEEEEEE
Confidence            89999999999999631 122577999999998654555567899999999999 999999999999876  56899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..++.++.|++.||.|||+++|+|||||             ++|
T Consensus       106 ~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~D  169 (302)
T 4e5w_A          106 FLPSGSLKEYLPKNKN----------------KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD  169 (302)
T ss_dssp             CCTTCBHHHHHHHHTT----------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECC
T ss_pred             eCCCCcHHHHHHhccc----------------cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECc
Confidence            9999999999976543                28999999999999999999999999999996             789


Q ss_pred             CCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......      ....+|..|+|||++.+..++.++||.
T Consensus       170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  213 (302)
T 4e5w_A          170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVW  213 (302)
T ss_dssp             CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHH
T ss_pred             ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHH
Confidence            99998754432      356778889999999999999999974

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.97  E-value=2.7e-30  Score=237.34  Aligned_cols=162  Identities=24%  Similarity=0.300  Sum_probs=135.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.+..   ...+..||||+++........+.|.+|+.+|+.+ +|||||++++++.. +..++||||+
T Consensus       343 ~LG~G~fG~Vy~~~~~~---~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~~lv~E~~  417 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRM---RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMA  417 (613)
T ss_dssp             EEEECSSSEEEEEEEEC---SSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSEEEEEECC
T ss_pred             EEecCCCcEEEEEEEec---CCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCeEEEEEeC
Confidence            69999999999998762   1356789999998765555678899999999999 99999999999976 5699999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..++.++.||+.||.|||+++|+|||||             |+|||
T Consensus       418 ~~g~L~~~l~~~~~----------------~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFG  481 (613)
T 2ozo_A          418 GGGPLHKFLVGKRE----------------EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFG  481 (613)
T ss_dssp             TTCBHHHHHTTCTT----------------TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred             CCCcHHHHHhhccC----------------CCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeecc
Confidence            99999999976432                38999999999999999999999999999995             88999


Q ss_pred             cceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......      ....+++.|+|||++.+..++.++||.
T Consensus       482 la~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvw  523 (613)
T 2ozo_A          482 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW  523 (613)
T ss_dssp             TTTTCC--------------CCTTSCHHHHHHCCCCHHHHHH
T ss_pred             CcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHH
Confidence            998643322      123455789999999999999999974

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=6.6e-30  Score=218.36  Aligned_cols=161  Identities=18%  Similarity=0.277  Sum_probs=142.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..||+|++....  .....+.+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus        47 ~~lg~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           47 RFLGKGGFAKCFEISDA-----DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEeeCCCeEEEEEEEC-----CCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEE
Confidence            38999999999999987     577899999996432  345667899999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++.....                 +++..++.++.||+.||.|||++||+|||||             ++
T Consensus       121 e~~~~~~L~~~~~~~~~-----------------l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~  183 (335)
T 2owb_A          121 ELCRRRSLLELHKRRKA-----------------LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIG  183 (335)
T ss_dssp             CCCTTCBHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC
T ss_pred             ecCCCCCHHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEe
Confidence            99999999999987665                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++......   .....||+.|+|||++.+..++.++||.
T Consensus       184 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  225 (335)
T 2owb_A          184 DFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW  225 (335)
T ss_dssp             CCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHH
T ss_pred             eccCceecccCcccccccCCCccccCHHHhccCCCCchhhHH
Confidence            99999865432   2456789999999999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=1.1e-29  Score=212.88  Aligned_cols=161  Identities=18%  Similarity=0.277  Sum_probs=142.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||++...     .++..||+|++....  .....+.+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus        21 ~~lg~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           21 RFLGKGGFAKCFEISDA-----DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEeecCCEEEEEEEEC-----CCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEEEEE
Confidence            38999999999999987     577899999986432  345567899999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++.....                 +++..+..++.|++.||.|||++||+|||||             ++
T Consensus        95 e~~~~~~L~~~~~~~~~-----------------~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~  157 (294)
T 2rku_A           95 ELCRRRSLLELHKRRKA-----------------LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIG  157 (294)
T ss_dssp             ECCTTCBHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred             ecCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEE
Confidence            99999999999987665                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++......   .....||+.|+|||++.+..++.++||.
T Consensus       158 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  199 (294)
T 2rku_A          158 DFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW  199 (294)
T ss_dssp             CCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHH
T ss_pred             eccCceecccCccccccccCCCCcCCcchhccCCCCchhhHH
Confidence            99999865432   2456789999999999999999999974

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.97  E-value=2e-30  Score=216.55  Aligned_cols=164  Identities=19%  Similarity=0.246  Sum_probs=135.8

Q ss_pred             eeeecCceEEEEEEEccccc--CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILK--QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|.......  ...+..||+|++... .....+.+.+|+.+++.+ +||||+++++++.+++..++|||
T Consensus        15 ~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e   92 (289)
T 4fvq_A           15 SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA-HRNYSESFFEAASMMSKL-SHKHLVLNYGVCVCGDENILVQE   92 (289)
T ss_dssp             EEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG-GGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECCTTCCEEEEE
T ss_pred             eeccCCCceEEEEEEecccccccccchhhhhhhcccc-cHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEeCCCCEEEEE
Confidence            89999999999999863111  112368999999754 344567899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+++|+|.+++.....                .+++..++.++.||+.||.|||+++|+|||||                
T Consensus        93 ~~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  156 (289)
T 4fvq_A           93 FVKFGSLDTYLKKNKN----------------CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGN  156 (289)
T ss_dssp             CCTTCBHHHHHHHTGG----------------GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTB
T ss_pred             CCCCCCHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccc
Confidence            9999999999987542                38999999999999999999999999999986                


Q ss_pred             -----ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                           ++|||++.... ......+|+.|+|||++.+ ..++.++||.
T Consensus       157 ~~~~kl~Dfg~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw  202 (289)
T 4fvq_A          157 PPFIKLSDPGISITVL-PKDILQERIPWVPPECIENPKNLNLATDKW  202 (289)
T ss_dssp             CCEEEECCCCSCTTTS-CHHHHHHTTTTSCHHHHHCGGGCCHHHHHH
T ss_pred             cceeeeccCccccccc-CccccCCcCcccCHHHhCCCCCCCchhHHH
Confidence                 56777765322 1234567899999999987 7789999974

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=2.1e-30  Score=217.72  Aligned_cols=160  Identities=20%  Similarity=0.263  Sum_probs=130.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-------------------------HHHHHHHHHHHHHHHh
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-------------------------AEMMDLVSEMEMMKMI  126 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~~l  126 (258)
                      ..||+|+||.||+|...     .++..||||++......                         ...+.+.+|+.+++.+
T Consensus        19 ~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   93 (298)
T 2zv2_A           19 DEIGKGSYGVVKLAYNE-----NDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL   93 (298)
T ss_dssp             EEEEC--CCEEEEEEET-----TTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred             eEEeecCCEEEEEEEEC-----CCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence            38999999999999987     57899999999654211                         1235689999999999


Q ss_pred             cCCCcccceeeeEEc--CCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q psy12228        127 GQHINIINLLGVCTQ--DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQ  204 (258)
Q Consensus       127 ~~h~nIv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH  204 (258)
                       +||||+++++++.+  .+..++||||+++|+|.+++..                  ..+++..+..++.||+.||.|||
T Consensus        94 -~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------------------~~~~~~~~~~~~~qi~~~l~~lH  154 (298)
T 2zv2_A           94 -DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------------------KPLSEDQARFYFQDLIKGIEYLH  154 (298)
T ss_dssp             -CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------------------SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------------------CCCCHHHHHHHHHHHHHHHHHHH
Confidence             99999999999986  5579999999999999875432                  23899999999999999999999


Q ss_pred             hCCccccCcc-------------ccCCCcceeeeccC---CccccccccccccccccCC---CCccccee
Q psy12228        205 SRKVGNDAVR-------------FIGFDLCILVFFHD---STLLKTTSTIASLILRNQK---VSVLLDLI  255 (258)
Q Consensus       205 ~~~iiH~DlK-------------i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~---~s~~~Dv~  255 (258)
                      ++||+|||||             ++|||+++......   ....||+.|+|||++.+..   ++.++||.
T Consensus       155 ~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~  224 (298)
T 2zv2_A          155 YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVW  224 (298)
T ss_dssp             HTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHH
T ss_pred             HCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhH
Confidence            9999999995             78999998754432   4568999999999998765   37788874

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=8.6e-30  Score=218.94  Aligned_cols=160  Identities=19%  Similarity=0.299  Sum_probs=137.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||||++....  .....+.+.+|+.+++.+ +||||+++++++.+++..++||
T Consensus        60 ~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           60 REIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             EEEEECSSEEEEEEEET-----TTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEE
T ss_pred             eEEccCCCEEEEEEEEc-----cCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEEEEE
Confidence            37999999999999986     578999999997542  233456799999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+. |+|.+++.....                .+++..+..++.|++.||.|||+++|+|||||             ++
T Consensus       134 e~~~-g~l~~~l~~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~  196 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKK----------------PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG  196 (348)
T ss_dssp             ECCS-EEHHHHHHHHTS----------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEEC
T ss_pred             ecCC-CCHHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEe
Confidence            9998 599998876442                38999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccCCccccccccccccccc---cCCCCccccee
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                      |||+++... ......||+.|+|||++.   +..++.++||.
T Consensus       197 DfG~a~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diw  237 (348)
T 1u5q_A          197 DFGSASIMA-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVW  237 (348)
T ss_dssp             CCTTCBSSS-SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHH
T ss_pred             eccCceecC-CCCcccCCcceeCHhhhccccCCCCCcHHHHH
Confidence            999997643 235678999999999984   56789999974

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.97  E-value=1.2e-30  Score=227.87  Aligned_cols=163  Identities=18%  Similarity=0.234  Sum_probs=139.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC--cEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~--~~~lv~e  150 (258)
                      +||+|+||.||+|...     .++..||||+++........+.+.+|+.+++.+ +||||+++++++...+  ..++|||
T Consensus        16 ~LG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~lv~e   89 (396)
T 4eut_A           16 ILGQGATANVFRGRHK-----KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIME   89 (396)
T ss_dssp             EEEECSSEEEEEEEET-----TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred             EEEcCCCeEEEEEEEC-----CCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCeeEEEEe
Confidence            8999999999999987     578999999997543344456788999999999 9999999999998755  6899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+++|+|.+++.....              ...+++..++.++.||+.||.|||++||+|||||                
T Consensus        90 ~~~~g~L~~~l~~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  155 (396)
T 4eut_A           90 FCPCGSLYTVLEEPSN--------------AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVY  155 (396)
T ss_dssp             CCTTEEHHHHTTSGGG--------------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEE
T ss_pred             cCCCCCHHHHHHhhhc--------------ccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeE
Confidence            9999999999987543              1238999999999999999999999999999995                


Q ss_pred             -ccCCCcceeeeccC--Ccccccccccccccccc--------CCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD--STLLKTTSTIASLILRN--------QKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~--------~~~s~~~Dv~  255 (258)
                       ++|||+++......  ....||+.|+|||++.+        ..++.++||.
T Consensus       156 kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Diw  207 (396)
T 4eut_A          156 KLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLW  207 (396)
T ss_dssp             EECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHH
T ss_pred             EEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHH
Confidence             78999998654432  46679999999999875        5678888874

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=8.3e-30  Score=214.42  Aligned_cols=159  Identities=19%  Similarity=0.305  Sum_probs=141.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|++.........+.+.+|+.+++.+ +||||+++++++.+.+..++||||+
T Consensus        29 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~  102 (303)
T 3a7i_A           29 KIGKGSFGEVFKGIDN-----RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYL  102 (303)
T ss_dssp             EEEECSSSEEEEEEET-----TTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hhcccCCeEEEEEEEC-----CCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEEeC
Confidence            8999999999999987     578899999997655555667899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++++|.+++...                  .+++..+..++.|++.||.|||++||+|||||             ++|||
T Consensus       103 ~~~~L~~~~~~~------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg  164 (303)
T 3a7i_A          103 GGGSALDLLEPG------------------PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFG  164 (303)
T ss_dssp             TTEEHHHHHTTS------------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CCCcHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecc
Confidence            999999998652                  28999999999999999999999999999995             78999


Q ss_pred             cceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......   ....||+.|+|||++.+..++.++||.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  203 (303)
T 3a7i_A          165 VAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW  203 (303)
T ss_dssp             TCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             cceecCccccccCccCCCcCccCHHHHhcCCCCchhhhH
Confidence            998654432   456789999999999999999999974

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.97  E-value=8.5e-30  Score=217.45  Aligned_cols=182  Identities=45%  Similarity=0.588  Sum_probs=143.2

Q ss_pred             eeeecCceEEEEEEEcccc--cCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGIL--KQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...+..  ...++..||+|+++........+.+.+|+.+++.+.+||||+++++++.+.+..++|||
T Consensus        42 ~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e  121 (334)
T 2pvf_A           42 PLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE  121 (334)
T ss_dssp             EEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEE
T ss_pred             EEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEE
Confidence            8999999999999985321  12356789999998766667778899999999999889999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++........ .............+++..++.++.||+.||.|||++||+|||||             ++|
T Consensus       122 ~~~~~~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~D  200 (334)
T 2pvf_A          122 YASKGNLREYLRARRPPGM-EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIAD  200 (334)
T ss_dssp             CCTTCBHHHHHHTTSCTTC-CSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             CCCCCcHHHHHHHhccccc-cccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcc
Confidence            9999999999987653100 00000001112348999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....+|+.|+|||++.+..++.++||.
T Consensus       201 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  243 (334)
T 2pvf_A          201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW  243 (334)
T ss_dssp             CTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHH
T ss_pred             ccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHH
Confidence            99998654322     345667889999999998999999974

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=6.7e-30  Score=215.66  Aligned_cols=161  Identities=19%  Similarity=0.226  Sum_probs=135.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|++..... ....+.+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus         9 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            9 GKIGEGSYGVVFKCRNR-----DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eEEeecCCeEEEEEEeC-----CCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEEEEE
Confidence            38999999999999987     5789999999865433 34457788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++++|.+++.....                 +++..+..++.|++.||.|||++||+|||||             ++|
T Consensus        83 ~~~~~~l~~~~~~~~~-----------------~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~D  145 (311)
T 4agu_A           83 YCDHTVLHELDRYQRG-----------------VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCD  145 (311)
T ss_dssp             CCSEEHHHHHHHTSSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             eCCCchHHHHHhhhcC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEee
Confidence            9999999998876554                 9999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ||++.......   ....||+.|+|||++.+ ..++.++||.
T Consensus       146 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  187 (311)
T 4agu_A          146 FGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVW  187 (311)
T ss_dssp             CTTCEECC------------GGGCCHHHHHTCSCCCTHHHHH
T ss_pred             CCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhH
Confidence            99998654332   45688999999999976 6779999974

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.97  E-value=1.5e-30  Score=221.47  Aligned_cols=173  Identities=23%  Similarity=0.321  Sum_probs=138.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.+.+.....++..||||++...........+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~  114 (327)
T 2yfx_A           36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILMEL  114 (327)
T ss_dssp             EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCCCCcEEEEec
Confidence            3899999999999996533333567899999998665666777899999999999 999999999999999899999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------c
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------F  215 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i  215 (258)
                      +++|+|.+++......          ......+++..++.++.||+.||.|||++||+|||||                +
T Consensus       115 ~~~~~L~~~l~~~~~~----------~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          115 MAGGDLKSFLRETRPR----------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             CTTEEHHHHHHHTSCC----------SSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             CCCCcHHHHHHhhccc----------ccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEE
Confidence            9999999999876531          1122348999999999999999999999999999995                6


Q ss_pred             cCCCcceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||++......     .....+|+.|+|||++.+..++.++||.
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  229 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW  229 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHH
Confidence            788888643222     2345678899999999999999999974

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=3.1e-30  Score=214.61  Aligned_cols=160  Identities=22%  Similarity=0.308  Sum_probs=136.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .++..||+|++.....  ......+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        16 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   89 (279)
T 3fdn_A           16 PLGKGKFGNVYLAREK-----QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILE   89 (279)
T ss_dssp             EEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEecCCCeEEEEEEEc-----cCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEEEEEe
Confidence            8999999999999987     5778999999964211  11245688999999999 89999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                 +++..++.++.|++.||.|||++||+|||||             ++|
T Consensus        90 ~~~~~~l~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~D  152 (279)
T 3fdn_A           90 YAPLGTVYRELQKLSK-----------------FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD  152 (279)
T ss_dssp             CCTTEEHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECS
T ss_pred             cCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEe
Confidence            9999999999988765                 9999999999999999999999999999995             789


Q ss_pred             CCcceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++...... .....||+.|+|||++.+..++.++||.
T Consensus       153 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  191 (279)
T 3fdn_A          153 FGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW  191 (279)
T ss_dssp             CCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHH
T ss_pred             ccccccCCcccccccCCCCCccCHhHhccCCCCccchhH
Confidence            9988654333 2567889999999999999999999974

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=2.4e-30  Score=231.55  Aligned_cols=160  Identities=23%  Similarity=0.324  Sum_probs=140.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      .+||+|+||.||+|...     .++..||||++....  .....+.+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus        32 ~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           32 RVLGKGSFGEVILCKDK-----ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             eEEecCCCEEEEEEEEC-----CCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEE
Confidence            38999999999999987     678999999996432  233457799999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------  214 (258)
                      ||+.+|+|.+++.....                 +++..++.++.||+.||.|||++||+|||||               
T Consensus       106 e~~~~~~L~~~~~~~~~-----------------~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~  168 (484)
T 3nyv_A          106 EVYTGGELFDEIISRKR-----------------FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANI  168 (484)
T ss_dssp             CCCCSCBHHHHHHTCSC-----------------CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCE
T ss_pred             ecCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcE
Confidence            99999999999987655                 9999999999999999999999999999995               


Q ss_pred             -ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||+++......  ....||+.|+|||++.+ .|+.++||.
T Consensus       169 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Diw  211 (484)
T 3nyv_A          169 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVW  211 (484)
T ss_dssp             EECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHH
T ss_pred             EEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeH
Confidence             78999987654433  45689999999999987 799999974

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=2.7e-30  Score=220.04  Aligned_cols=164  Identities=17%  Similarity=0.260  Sum_probs=138.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||+|+++... .......+.+|+.++..+.+||||+++++++.+.+..++|||
T Consensus        35 ~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e  109 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISK-----STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE  109 (327)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceeCCCCCeEEEEEEEC-----CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence            47999999999999987     578999999997532 233456799999999999777999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+++|+|.+++.....               ..+++..++.++.||+.||.|||++||+|||||                
T Consensus       110 ~~~~~~L~~~~~~~~~---------------~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~k  174 (327)
T 3lm5_A          110 YAAGGEIFSLCLPELA---------------EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIK  174 (327)
T ss_dssp             CCTTEEGGGGGSSCC----------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEE
T ss_pred             ecCCCcHHHHHHHhcc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEE
Confidence            9999999999865432               348999999999999999999999999999995                


Q ss_pred             ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||+++......  ....||+.|+|||++.+..++.++||.
T Consensus       175 L~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  217 (327)
T 3lm5_A          175 IVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMW  217 (327)
T ss_dssp             ECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHH
T ss_pred             EeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHH
Confidence            78999998654332  456899999999999999999999974

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.97  E-value=1.3e-30  Score=231.68  Aligned_cols=161  Identities=27%  Similarity=0.367  Sum_probs=136.3

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ....||+|+||.||+|.+.      .+..||||+++...  ...+.|.+|+.+|+.+ +||||+++++++. .+..++||
T Consensus       192 ~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~lv~  261 (454)
T 1qcf_A          192 LEKKLGAGQFGEVWMATYN------KHTKVAVKTMKPGS--MSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIYIIT  261 (454)
T ss_dssp             EEEEEECCSSEEEEEEEET------TTEEEEEEEECTTS--BCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEE
T ss_pred             EEEEcccCCceEEEEEEEC------CccEEEEEEecCCC--ccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccEEEE
Confidence            3458999999999999986      35789999998642  3356899999999999 9999999999986 56789999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....               ..+++..++.++.||+.||.|||+++|+|||||             |+
T Consensus       262 e~~~~g~L~~~l~~~~~---------------~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~  326 (454)
T 1qcf_A          262 EFMAKGSLLDFLKSDEG---------------SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIA  326 (454)
T ss_dssp             CCCTTCBHHHHHHSHHH---------------HTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEEC
T ss_pred             eecCCCcHHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEe
Confidence            99999999999986431               238999999999999999999999999999995             88


Q ss_pred             CCCcceeeecc----CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....    .....+++.|+|||++.+..++.++||.
T Consensus       327 DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  369 (454)
T 1qcf_A          327 DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW  369 (454)
T ss_dssp             STTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHH
T ss_pred             eCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHH
Confidence            99999864332    1334567889999999999999999974

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.97  E-value=3.7e-30  Score=237.15  Aligned_cols=162  Identities=23%  Similarity=0.319  Sum_probs=134.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|.+..   ..++..||||+++... .....+.+.+|+.+|+.+ +|||||++++++.. +..++|||
T Consensus       375 ~~LG~G~fG~Vy~~~~~~---~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~-~~~~lv~E  449 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQM---KKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICEA-ESWMLVME  449 (635)
T ss_dssp             EEEEECSSEEEEEEEEEC---SSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSEEEEEE
T ss_pred             CEeccCCCEEEEEEEEcC---CCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec-CCEEEEEE
Confidence            479999999999997642   1467899999997542 334467899999999999 99999999999964 46899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                 +++..++.|+.||+.||.|||+++|+|||||             |+|
T Consensus       450 ~~~~g~L~~~l~~~~~-----------------l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~D  512 (635)
T 4fl3_A          450 MAELGPLNKYLQQNRH-----------------VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISD  512 (635)
T ss_dssp             CCTTEEHHHHHHHCTT-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC
T ss_pred             ccCCCCHHHHHhhCCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEE
Confidence            9999999999987655                 9999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......      ....+|+.|+|||++.+..++.++||.
T Consensus       513 FGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvw  556 (635)
T 4fl3_A          513 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW  556 (635)
T ss_dssp             TTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHH
T ss_pred             cCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHH
Confidence            99998543322      234567889999999999999999974

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.97  E-value=9.4e-30  Score=215.84  Aligned_cols=163  Identities=25%  Similarity=0.318  Sum_probs=139.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv~e  150 (258)
                      .||+|+||.||++.+.. ....++..||||+++........+.+.+|+.+++.+ +||||+++++++.+.  ..+++|||
T Consensus        38 ~lG~G~~g~V~~~~~~~-~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e  115 (318)
T 3lxp_A           38 DLGEGHFGKVSLYCYDP-TNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVME  115 (318)
T ss_dssp             EEEECSSEEEEEEEECS-CC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred             eecCCCCeEEEEEEEcc-CCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCCCceEEEEEe
Confidence            89999999999987642 122467999999998776667778899999999999 899999999999874  56899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++....                  +++..++.++.|++.||.|||++||+|||||             ++|
T Consensus       116 ~~~~~~L~~~l~~~~------------------~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~D  177 (318)
T 3lxp_A          116 YVPLGSLRDYLPRHS------------------IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGD  177 (318)
T ss_dssp             CCTTCBHHHHGGGSC------------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             cccCCcHHHHHhhCC------------------CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECC
Confidence            999999999997643                  8999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......      ....+|+.|+|||++.+..++.++||.
T Consensus       178 fg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  221 (318)
T 3lxp_A          178 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW  221 (318)
T ss_dssp             GGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHH
T ss_pred             ccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHH
Confidence            99998754432      345678889999999999999999974

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=8.2e-30  Score=217.66  Aligned_cols=167  Identities=24%  Similarity=0.293  Sum_probs=136.5

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|..... ....+..||+|+++..........+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        49 ~~~lG~G~~g~Vy~~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e  126 (333)
T 1mqb_A           49 QKVIGAGEFGEVYKGMLKTS-SGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITE  126 (333)
T ss_dssp             EEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEE
T ss_pred             ccEEecCCCeEEEEEEEecC-CCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCCcEEEEe
Confidence            34899999999999998621 11235679999998766666777899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..++.++.||+.||.|||++||+|||||             ++|
T Consensus       127 ~~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~D  190 (333)
T 1mqb_A          127 YMENGALDKFLREKDG----------------EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSD  190 (333)
T ss_dssp             CCTTEEHHHHHHHTTT----------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECC
T ss_pred             CCCCCcHHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECC
Confidence            9999999999987532                38999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......      ....+|+.|+|||++.+..++.++||.
T Consensus       191 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  234 (333)
T 1mqb_A          191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVW  234 (333)
T ss_dssp             CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHH
T ss_pred             CCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhH
Confidence            99998654322      233457789999999999999999974

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.97  E-value=5.7e-30  Score=215.73  Aligned_cols=177  Identities=25%  Similarity=0.276  Sum_probs=145.1

Q ss_pred             cceeeeeceeeec-cce------eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---ChHHHHHHHHHHHHHHH
Q psy12228         56 KVSLINVLTVTIN-SQE------YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---SDAEMMDLVSEMEMMKM  125 (258)
Q Consensus        56 ~~~~~~~~~~~~~-~~~------~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~  125 (258)
                      .+++.++..++.+ +..      ..||+|+||.||+|...       +..||+|++....   .....+.+.+|+.+++.
T Consensus        14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~   86 (307)
T 2nru_A           14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-------NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAK   86 (307)
T ss_dssp             ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS-------SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC-------CceEEEEEEecccCcchHHHHHHHHHHHHHHHh
Confidence            4555555555554 322      58999999999999864       4789999996532   33456789999999999


Q ss_pred             hcCCCcccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy12228        126 IGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS  205 (258)
Q Consensus       126 l~~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~  205 (258)
                      + +||||+++++++.+.+..++||||+++|+|.+++.....              ...+++..++.++.|++.||.|||+
T Consensus        87 l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~i~~~i~~~l~~lH~  151 (307)
T 2nru_A           87 C-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--------------TPPLSWHMRCKIAQGAANGINFLHE  151 (307)
T ss_dssp             C-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--------------CCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-CCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--------------CCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            9 999999999999999999999999999999999986432              1348999999999999999999999


Q ss_pred             CCccccCcc-------------ccCCCcceeeecc-----CCccccccccccccccccCCCCccccee
Q psy12228        206 RKVGNDAVR-------------FIGFDLCILVFFH-----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       206 ~~iiH~DlK-------------i~dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +||+|||||             ++|||+++.....     .....||+.|+|||++.+ .++.++||.
T Consensus       152 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~  218 (307)
T 2nru_A          152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIY  218 (307)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHH
T ss_pred             CCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhH
Confidence            999999995             7899999865432     234678999999999876 588999974

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=5.5e-30  Score=221.65  Aligned_cols=159  Identities=21%  Similarity=0.301  Sum_probs=132.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------c
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------P  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------~  144 (258)
                      ..||+|+||.||+|...     .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++...+      .
T Consensus        31 ~~lG~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~  104 (367)
T 1cm8_A           31 QPVGSGAYGAVCSAVDG-----RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTD  104 (367)
T ss_dssp             EEC------CEEEEEET-----TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCC
T ss_pred             EEeeecCCeEEEEEEEC-----CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccccCce
Confidence            38999999999999987     678999999996543 444567899999999999 9999999999998653      4


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +++||||+ +++|.+++... .                 +++..+..++.||+.||.|||++||+|||||          
T Consensus       105 ~~lv~e~~-~~~L~~~~~~~-~-----------------l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~  165 (367)
T 1cm8_A          105 FYLVMPFM-GTDLGKLMKHE-K-----------------LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC  165 (367)
T ss_dssp             CEEEEECC-SEEHHHHHHHC-C-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             EEEEEecC-CCCHHHHHhcC-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCC
Confidence            69999999 67999999763 2                 8999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                         ++|||+++..........+|+.|+|||++.+ ..++.++||.
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  210 (367)
T 1cm8_A          166 ELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIW  210 (367)
T ss_dssp             CEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHH
T ss_pred             CEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHH
Confidence               8899999976655567789999999999987 7889999974

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.4e-30  Score=223.45  Aligned_cols=166  Identities=29%  Similarity=0.403  Sum_probs=132.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-CCcEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIV  149 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-~~~~~lv~  149 (258)
                      ...||+|+||.||+|....  .......||+|.++........+.+.+|+.+++++ +||||+++++++.. ++..++||
T Consensus        94 ~~~LG~G~fg~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           94 NEVIGRGHFGCVYHGTLLD--NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEECCSSSEEEEEEEEE--TTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCCEEEE
T ss_pred             CcEeeeCCCeEEEEEEEEC--CCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCeEEEE
Confidence            3489999999999999752  11345689999998765666778899999999999 99999999999764 45789999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                .+++..++.++.||+.||.|||++||+|||||             ++
T Consensus       171 e~~~~g~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~  234 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETH----------------NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA  234 (373)
T ss_dssp             ECCTTCBHHHHHHCTTC----------------CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             ECCCCCCHHHHHhhccc----------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEe
Confidence            99999999999986543                38999999999999999999999999999995             88


Q ss_pred             CCCcceeeeccC-------CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD-------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++......       ....+|+.|+|||++.+..++.++||.
T Consensus       235 DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  280 (373)
T 3c1x_A          235 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW  280 (373)
T ss_dssp             CC---------------------CCGGGSCHHHHHHCCCCHHHHHH
T ss_pred             eccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHH
Confidence            999998543321       234567889999999999999999974

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=8.2e-30  Score=212.55  Aligned_cols=160  Identities=23%  Similarity=0.337  Sum_probs=140.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .++..||+|++.....  ......+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        21 ~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e   94 (284)
T 2vgo_A           21 PLGKGKFGNVYLAREK-----QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLE   94 (284)
T ss_dssp             EEEECSSEEEEEEEET-----TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred             eecCCCCeEEEEEEEc-----CCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEEEE
Confidence            8999999999999987     5778999999964211  11235788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                 +++..+..++.|++.||.|||++||+|||||             ++|
T Consensus        95 ~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~D  157 (284)
T 2vgo_A           95 FAPRGELYKELQKHGR-----------------FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIAD  157 (284)
T ss_dssp             CCTTEEHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECC
T ss_pred             eCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEec
Confidence            9999999999988765                 8999999999999999999999999999995             789


Q ss_pred             CCcceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++...... .....|++.|+|||++.+..++.++||.
T Consensus       158 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  196 (284)
T 2vgo_A          158 FGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLW  196 (284)
T ss_dssp             CTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHH
T ss_pred             ccccccCcccccccccCCCCcCCHHHhccCCCCcccchh
Confidence            9998754432 2567899999999999999999999974

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.97  E-value=6.3e-30  Score=227.72  Aligned_cols=160  Identities=21%  Similarity=0.224  Sum_probs=130.9

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-----
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-----  143 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-----  143 (258)
                      ....||+|+||.||+|...     .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++...+     
T Consensus        66 ~~~~lG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           66 NLKPIGSGAQGIVCAAYDA-----VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EEEEEEECSSCEEEEEEET-----TTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTC
T ss_pred             EEEEeecCCCeEEEEEEEC-----CCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccccC
Confidence            3458999999999999987     578999999997532 344567899999999999 9999999999997543     


Q ss_pred             -cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------
Q psy12228        144 -PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------  214 (258)
Q Consensus       144 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------  214 (258)
                       .+++||||+++ +|.+.+..  .                 +++..+..++.||+.||+|||++||+|||||        
T Consensus       140 ~~~~lv~E~~~~-~l~~~~~~--~-----------------l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~  199 (464)
T 3ttj_A          140 QDVYLVMELMDA-NLCQVIQM--E-----------------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS  199 (464)
T ss_dssp             CEEEEEEECCSE-EHHHHHTS--C-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             CeEEEEEeCCCC-CHHHHHhh--c-----------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeC
Confidence             57999999986 67777643  1                 8999999999999999999999999999995        


Q ss_pred             -----ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                           |+|||+++......  ...+||+.|+|||++.+..|+.++||.
T Consensus       200 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  247 (464)
T 3ttj_A          200 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW  247 (464)
T ss_dssp             TSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHH
T ss_pred             CCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHH
Confidence                 88999998655432  467899999999999999999999974

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.97  E-value=4.1e-30  Score=214.59  Aligned_cols=160  Identities=30%  Similarity=0.397  Sum_probs=140.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|+++..  ....+.+.+|+.+++.+ +||||+++++++.+.+..++||||+
T Consensus        20 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~   91 (288)
T 3kfa_A           20 KLGGGQYGEVYEGVWK-----KYSLTVAVKTLKED--TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFM   91 (288)
T ss_dssp             ESGGGTTCSEEEEEEG-----GGTEEEEEEEECSC--STHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             ecCCCCceeEEEeEec-----CCCEEEEEEecCcC--HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEEEEEcC
Confidence            8999999999999997     57899999999764  33456799999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....               ..+++..++.++.|++.||.|||+++|+|||||             ++|||
T Consensus        92 ~~~~L~~~~~~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg  156 (288)
T 3kfa_A           92 TYGNLLDYLRECNR---------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG  156 (288)
T ss_dssp             TTEEHHHHHHHCCT---------------TTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             CCCcHHHHHHhccc---------------CCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCc
Confidence            99999999987543               348999999999999999999999999999995             78999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......    ....+|+.|+|||++.+..++.++||.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  196 (288)
T 3kfa_A          157 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW  196 (288)
T ss_dssp             GGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             cceeccCCccccccCCccccCcCChhhhccCCCCchhhHH
Confidence            997644332    344567889999999999999999974

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=2.1e-29  Score=209.65  Aligned_cols=164  Identities=15%  Similarity=0.180  Sum_probs=138.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...     .++..||+|+++... .......+.+|+..+..+.+||||+++++++.+++..++||||
T Consensus        18 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~   92 (289)
T 1x8b_A           18 KIGSGEFGSVFKCVKR-----LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEY   92 (289)
T ss_dssp             EEEEETTEEEEEEEET-----TTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhcCCCceEEEEEEEc-----CCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEe
Confidence            8999999999999987     578999999997543 3445577899999999987899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------------  214 (258)
                      +++|+|.+++.....             ....+++..++.++.||+.||.|||++||+|||||                 
T Consensus        93 ~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~  159 (289)
T 1x8b_A           93 CNGGSLADAISENYR-------------IMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASE  159 (289)
T ss_dssp             CTTCBHHHHHHHHHH-------------HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------
T ss_pred             cCCCcHHHHHHhhcc-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccc
Confidence            999999999987521             01238999999999999999999999999999985                 


Q ss_pred             ---------------ccCCCcceeeeccCCccccccccccccccccC-CCCccccee
Q psy12228        215 ---------------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 ---------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                                     ++|||++..... .....||+.|+|||++.+. .+++++||.
T Consensus       160 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~  215 (289)
T 1x8b_A          160 EGDEDDWASNKVMFKIGDLGHVTRISS-PQVEEGDSRFLANEVLQENYTHLPKADIF  215 (289)
T ss_dssp             ----------CCCEEECCCTTCEETTC-SCCCCCCGGGCCHHHHTTCCTTHHHHHHH
T ss_pred             ccccccccCCceEEEEcccccccccCC-ccccCCCccccChhHhcCCCCCCchhhHH
Confidence                           467887775432 3445799999999999876 667899974

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=1.9e-30  Score=228.36  Aligned_cols=161  Identities=19%  Similarity=0.253  Sum_probs=128.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-------ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-------SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG  143 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~  143 (258)
                      ...||+|+||.||+|...     .++..||||++....       .......+.+|+.+|+++ +||||+++++++.. +
T Consensus       140 ~~~LG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~-~  212 (419)
T 3i6u_A          140 SKTLGSGACGEVKLAFER-----KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDA-E  212 (419)
T ss_dssp             EEEEEECSSSEEEEEEET-----TTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEES-S
T ss_pred             EeEEeeCCCeEEEEEEEC-----CCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEec-C
Confidence            447999999999999987     678999999996421       112223588999999999 99999999999854 4


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      ..++||||+++|+|.+++.....                 +++..+..++.|++.||.|||+++|+|||||         
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~  275 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGNKR-----------------LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ  275 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSSCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS
T ss_pred             ceEEEEEcCCCCcHHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecC
Confidence            68999999999999998876554                 9999999999999999999999999999995         


Q ss_pred             -------ccCCCcceeeeccC--Ccccccccccccccccc---CCCCccccee
Q psy12228        215 -------FIGFDLCILVFFHD--STLLKTTSTIASLILRN---QKVSVLLDLI  255 (258)
Q Consensus       215 -------i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~---~~~s~~~Dv~  255 (258)
                             ++|||+++......  ....||+.|+|||++.+   ..++.++||.
T Consensus       276 ~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diw  328 (419)
T 3i6u_A          276 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW  328 (419)
T ss_dssp             SSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHH
T ss_pred             CCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhH
Confidence                   78999998654332  46789999999999863   6788999974

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2e-29  Score=211.32  Aligned_cols=165  Identities=25%  Similarity=0.289  Sum_probs=140.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE-EEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL-YVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~-~lv~e  150 (258)
                      .+||+|+||.||+|.+..  ....+..||+|.++........+.+.+|+.+++.+ +||||+++++++.+.+.. +++||
T Consensus        27 ~~lg~G~~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e  103 (298)
T 3pls_A           27 RVIGKGHFGVVYHGEYID--QAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLPHVLLP  103 (298)
T ss_dssp             EEEEEETTEEEEEEEEEC--SSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEEC
T ss_pred             ceeccCCCceEEEEEEec--CCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCcEEEEe
Confidence            489999999999999752  12345689999998766667778899999999999 999999999999876654 99999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+.+|+|.+++.....                .+++..++.++.|++.||.|||++||+|||||             ++|
T Consensus       104 ~~~~~~L~~~~~~~~~----------------~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~D  167 (298)
T 3pls_A          104 YMCHGDLLQFIRSPQR----------------NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVAD  167 (298)
T ss_dssp             CCTTCBHHHHHHCTTC----------------CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECC
T ss_pred             cccCCCHHHHHhcccc----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCc
Confidence            9999999999987432                38999999999999999999999999999995             789


Q ss_pred             CCcceeeecc-------CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH-------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....       .....+|+.|+|||.+.+..++.++||.
T Consensus       168 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  212 (298)
T 3pls_A          168 FGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVW  212 (298)
T ss_dssp             TTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHH
T ss_pred             CCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchh
Confidence            9999753221       2356778899999999999999999974

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=1.3e-30  Score=222.87  Aligned_cols=161  Identities=21%  Similarity=0.267  Sum_probs=139.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-------hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-------DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~  144 (258)
                      ..||+|+||.||+|...     .++..||||+++....       ......+.+|+.+++.+ +||||+++++++.+.+.
T Consensus        30 ~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           30 SPLGSGAFGFVWTAVDK-----EKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGF  103 (335)
T ss_dssp             EECSSSSSCSEEEEEET-----TTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred             eEEEecCCEEEEEEEEC-----CCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeCCE
Confidence            38999999999999987     5789999999976431       11334577899999999 99999999999999999


Q ss_pred             EEEEEEeCCCC-CHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        145 LYVIVEFAPHG-NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       145 ~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      .++||||+.+| +|.+++.....                 +++..+..++.||+.||.|||++||+|||||         
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~~~~-----------------l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  166 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDRHPR-----------------LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED  166 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHTCCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             EEEEEEeCCCCccHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCC
Confidence            99999999777 99999987655                 9999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeeccC--CccccccccccccccccCCC-Cccccee
Q psy12228        215 ----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                          ++|||+++......  ....||+.|+|||++.+..+ +.++||.
T Consensus       167 ~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  214 (335)
T 3dls_A          167 FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMW  214 (335)
T ss_dssp             SCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHH
T ss_pred             CcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccch
Confidence                78999998755443  46679999999999998887 8889974

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=8.3e-30  Score=221.93  Aligned_cols=159  Identities=21%  Similarity=0.245  Sum_probs=127.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC--cEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~--~~~lv~  149 (258)
                      .||+|+||.||+|...     .++..||||++.... .......+.+|+.++..+..||||+++++++...+  .+++||
T Consensus        16 ~lG~G~~g~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~   90 (388)
T 3oz6_A           16 KLGKGAYGIVWKSIDR-----RTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVF   90 (388)
T ss_dssp             C-------CEEEEEET-----TTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEE
T ss_pred             EeeeCCCeEEEEEEEC-----CCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEe
Confidence            7999999999999987     678999999996432 45566788999999999945999999999998544  689999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||++ |+|.+++....                  +++..+..++.||+.||.|||++||+|||||             ++
T Consensus        91 e~~~-~~L~~~~~~~~------------------~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~  151 (388)
T 3oz6_A           91 DYME-TDLHAVIRANI------------------LEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVA  151 (388)
T ss_dssp             ECCS-EEHHHHHHHTC------------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred             cccC-cCHHHHHHcCC------------------CCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEec
Confidence            9998 59999998642                  8999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc------------------------CCcccccccccccccccc-CCCCccccee
Q psy12228        217 GFDLCILVFFH------------------------DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~------------------------~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      |||+++.....                        ....+||+.|+|||++.+ ..|+.++||.
T Consensus       152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  215 (388)
T 3oz6_A          152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMW  215 (388)
T ss_dssp             CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHH
T ss_pred             CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHH
Confidence            99999864221                        134689999999999987 6789999973

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.97  E-value=4.6e-30  Score=213.90  Aligned_cols=158  Identities=25%  Similarity=0.368  Sum_probs=133.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...      ++..||+|+++....  ..+.+.+|+.++..+ +||||+++++++.+.+..++||||+
T Consensus        31 ~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           31 ELGTGQFGVVKYGKWR------GQYDVAIKMIKEGSM--SEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             ECC---CEEEEEEEET------TTEEEEEEEECTTSB--CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             hcCCCCCceEEEEEEc------CCCeEEEEEecCCCC--CHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEEEEecc
Confidence            8999999999999876      457899999986432  235689999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..++.++.|++.||.|||+++|+|||||             ++|||
T Consensus       102 ~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg  165 (283)
T 3gen_A          102 ANGCLLNYLREMRH----------------RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG  165 (283)
T ss_dssp             TTCBHHHHHHCGGG----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTT
T ss_pred             CCCcHHHHHHHhcc----------------CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccc
Confidence            99999999987432                28999999999999999999999999999996             78999


Q ss_pred             cceeeecc----CCccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFH----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++.....    .....+|+.|+|||++.+..++.++||.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  205 (283)
T 3gen_A          166 LSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW  205 (283)
T ss_dssp             GGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHH
T ss_pred             ccccccccccccccCCccCcccCCHHHhccCCCCchhhHH
Confidence            99754332    2345667889999999999999999974

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=3.9e-30  Score=219.26  Aligned_cols=159  Identities=24%  Similarity=0.301  Sum_probs=130.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...     .++..||||+++.... ....+.+.+|+.+++.+ +||||+++++++.+++..++||||
T Consensus        41 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~  114 (329)
T 3gbz_A           41 KLGEGTYGEVYKAIDT-----VTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEY  114 (329)
T ss_dssp             EEEECSSSEEEEEEET-----TTTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEecCCeEEEEEEEC-----CCCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEEEEEec
Confidence            8999999999999987     5789999999975432 23346788999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------------  214 (258)
                      +++ +|.+++.....                 +++..++.++.||+.||.|||+++|+|||||                 
T Consensus       115 ~~~-~L~~~~~~~~~-----------------~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~  176 (329)
T 3gbz_A          115 AEN-DLKKYMDKNPD-----------------VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVL  176 (329)
T ss_dssp             CSE-EHHHHHHHCTT-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEE
T ss_pred             CCC-CHHHHHhhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceE
Confidence            985 99999988765                 9999999999999999999999999999985                 


Q ss_pred             -ccCCCcceeeecc---CCccccccccccccccccC-CCCccccee
Q psy12228        215 -FIGFDLCILVFFH---DSTLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                       ++|||+++.....   .....||+.|+|||++.+. .++.++||.
T Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  222 (329)
T 3gbz_A          177 KIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIW  222 (329)
T ss_dssp             EECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHH
T ss_pred             EECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHH
Confidence             6799998754322   2456789999999999874 489999974

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.96  E-value=3.3e-30  Score=228.86  Aligned_cols=160  Identities=25%  Similarity=0.354  Sum_probs=131.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.+.      .+..||||+++....  ..+.|.+|+.+|+.+ +||||+++++++.+ +..++|||
T Consensus       189 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~iv~e  258 (452)
T 1fmk_A          189 EVKLGQGCFGEVWMGTWN------GTTRVAIKTLKPGTM--SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTE  258 (452)
T ss_dssp             EEEEEECSSCEEEEEEET------TTEEEEEEECCTTSS--CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEEC
T ss_pred             eeeecCCCCeEEEEEEEC------CCceEEEEEeccCCC--CHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceEEEeh
Confidence            447999999999999986      236799999986432  245799999999999 99999999999876 67899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....               ..+++..+..++.||+.||.|||+++|+|||||             ++|
T Consensus       259 ~~~~gsL~~~l~~~~~---------------~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~D  323 (452)
T 1fmk_A          259 YMSKGSLLDFLKGETG---------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVAD  323 (452)
T ss_dssp             CCTTCBHHHHHSHHHH---------------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             hhcCCCHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECC
Confidence            9999999999986421               238999999999999999999999999999995             889


Q ss_pred             CCcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......    ....+++.|+|||++.+..++.++||.
T Consensus       324 fG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvw  365 (452)
T 1fmk_A          324 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW  365 (452)
T ss_dssp             CCTTC--------------CCGGGSCHHHHHHCCCCHHHHHH
T ss_pred             CccceecCCCceecccCCcccccccCHhHHhcCCCCccccHH
Confidence            99998654322    234567889999999999999999974

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.4e-29  Score=211.63  Aligned_cols=162  Identities=25%  Similarity=0.305  Sum_probs=138.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.+..   ..++..||+|+++........+.+.+|+.+++.+ +||||+++++++ ..+..++||||+
T Consensus        17 ~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~   91 (287)
T 1u59_A           17 ELGCGNFGSVRQGVYRM---RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEALMLVMEMA   91 (287)
T ss_dssp             EEECCTTEEEEEEEEC------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSSEEEEEECC
T ss_pred             cccccCceeEEEeEecc---CCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCCcEEEEEeC
Confidence            79999999999998642   1356889999998765666778899999999999 999999999999 455799999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..++.++.|++.||.|||+++|+|||||             ++|||
T Consensus        92 ~~~~L~~~l~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg  155 (287)
T 1u59_A           92 GGGPLHKFLVGKRE----------------EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG  155 (287)
T ss_dssp             TTEEHHHHHTTCTT----------------TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCT
T ss_pred             CCCCHHHHHHhCCc----------------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECccc
Confidence            99999999975432                38999999999999999999999999999995             78999


Q ss_pred             cceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......      ....+|+.|+|||++.+..++.++||.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  197 (287)
T 1u59_A          156 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW  197 (287)
T ss_dssp             TCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHH
T ss_pred             ceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHH
Confidence            998654332      234567899999999988999999974

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.96  E-value=1.4e-29  Score=212.54  Aligned_cols=165  Identities=30%  Similarity=0.405  Sum_probs=136.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-CCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-~~~~~lv~e  150 (258)
                      ..||+|+||.||+|....  .......||+|.++........+.+.+|+.+++++ +||||+++++++.. ++..++|||
T Consensus        31 ~~lg~G~~g~Vy~~~~~~--~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e  107 (298)
T 3f66_A           31 EVIGRGHFGCVYHGTLLD--NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLP  107 (298)
T ss_dssp             EEEEEETTEEEEEEEEC-------CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEEE
T ss_pred             ceeeecCCceEEEEEEec--CCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCceEEEEe
Confidence            389999999999999752  11234579999998766667778899999999999 99999999998754 557899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..++.++.|++.||.|||+++|+|||||             ++|
T Consensus       108 ~~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~D  171 (298)
T 3f66_A          108 YMKHGDLRNFIRNETH----------------NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD  171 (298)
T ss_dssp             CCTTCBHHHHHHCTTC----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECS
T ss_pred             CCCCCCHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECc
Confidence            9999999999976442                38999999999999999999999999999995             789


Q ss_pred             CCcceeeecc-------CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH-------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....       .....+|+.|+|||++.+..++.++||.
T Consensus       172 fg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  216 (298)
T 3f66_A          172 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW  216 (298)
T ss_dssp             CGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHH
T ss_pred             ccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHH
Confidence            9999864332       1345677899999999999999999974

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1.6e-29  Score=213.53  Aligned_cols=161  Identities=16%  Similarity=0.200  Sum_probs=131.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|+++...  .....+.+.+|+.+++.+ +||||+++++++..++..++||
T Consensus        40 ~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           40 RLVGRGGMGDVYEAEDT-----VRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             EEEEECSSSEEEEEEET-----TTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEE
T ss_pred             EEEcCCCCeeEEEEEEc-----CCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEEE
Confidence            38999999999999987     577999999997532  233457899999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++.....                 +++..++.++.|++.||.|||+++|+|||||             ++
T Consensus       114 e~~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~  176 (309)
T 2h34_A          114 RLINGVDLAAMLRRQGP-----------------LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLV  176 (309)
T ss_dssp             ECCCCEEHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             EecCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEe
Confidence            99999999999998765                 9999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......    ....||+.|+|||++.+..++.++||.
T Consensus       177 Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  219 (309)
T 2h34_A          177 DFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIY  219 (309)
T ss_dssp             SCCC----------------CCGGGCCGGGTCC----CCCHHH
T ss_pred             cCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHH
Confidence            999987654332    356789999999999999999999974

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=3.7e-30  Score=218.80  Aligned_cols=155  Identities=23%  Similarity=0.346  Sum_probs=131.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC----cEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG----PLYVI  148 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~----~~~lv  148 (258)
                      +||+|+||.||+|...       +..||||+++..  ......+.+|+.+++.+ +||||+++++++....    .+++|
T Consensus        31 ~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           31 VKARGRFGCVWKAQLL-------NEYVAVKIFPIQ--DKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             EEECSTTCEEEEEEET-------TEEEEEEEECGG--GHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             eecccCceEEEEEEEC-------CCEEEEEEeecC--chHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCceEEEE
Confidence            8999999999999875       388999999753  33445567799999999 9999999999998754    37999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC----------CccccCcc----
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR----------KVGNDAVR----  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~----------~iiH~DlK----  214 (258)
                      |||+++|+|.+++....                  +++..++.++.|++.||.|||++          +|+|||||    
T Consensus       101 ~e~~~~g~L~~~l~~~~------------------~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Ni  162 (322)
T 3soc_A          101 TAFHEKGSLSDFLKANV------------------VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNV  162 (322)
T ss_dssp             EECCTTCBHHHHHHHCC------------------BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGE
T ss_pred             EecCCCCCHHHHHHhcC------------------CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhE
Confidence            99999999999997643                  89999999999999999999999          99999995    


Q ss_pred             ---------ccCCCcceeeeccC-----Ccccccccccccccccc-----CCCCccccee
Q psy12228        215 ---------FIGFDLCILVFFHD-----STLLKTTSTIASLILRN-----QKVSVLLDLI  255 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~-----~~~s~~~Dv~  255 (258)
                               ++|||+++......     ....||+.|+|||++.+     ..++.++||.
T Consensus       163 ll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw  222 (322)
T 3soc_A          163 LLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMY  222 (322)
T ss_dssp             EECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHH
T ss_pred             EECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhH
Confidence                     78999998654432     34678999999999987     4566788874

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.96  E-value=8.2e-30  Score=211.37  Aligned_cols=160  Identities=20%  Similarity=0.293  Sum_probs=139.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|+++........+.+.+|+.+++.+ +||||+++++++.+.+..++||||+
T Consensus        14 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   87 (276)
T 2yex_A           14 TLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYC   87 (276)
T ss_dssp             EEEECSSSEEEEEEET-----TTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EeecCCCcEEEEEEEC-----CCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEEEEEEec
Confidence            8999999999999987     577899999997544445567899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                 +++..+..++.|++.||.|||++||+|||||             ++|||
T Consensus        88 ~~~~L~~~l~~~~~-----------------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg  150 (276)
T 2yex_A           88 SGGELFDRIEPDIG-----------------MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG  150 (276)
T ss_dssp             TTEEGGGGSBTTTB-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             CCCcHHHHHhhccC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCC
Confidence            99999999876543                 8999999999999999999999999999995             78999


Q ss_pred             cceeeecc-----CCccccccccccccccccCCC-Cccccee
Q psy12228        220 LCILVFFH-----DSTLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                      ++......     .....||+.|+|||++.+..+ +.++||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  192 (276)
T 2yex_A          151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW  192 (276)
T ss_dssp             TCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHH
T ss_pred             CccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHH
Confidence            99865432     245678999999999988776 7889974

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.96  E-value=2.9e-29  Score=208.88  Aligned_cols=164  Identities=22%  Similarity=0.329  Sum_probs=138.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...+  ...++..||+|.++........+.+.+|+.+++.+ +||||+++++++.++ ..++||||
T Consensus        18 ~~lg~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~~~~v~e~   93 (281)
T 3cc6_A           18 RILGEGFFGEVYEGVYTN--HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEEE-PTWIIMEL   93 (281)
T ss_dssp             EEEEECSSSEEEEEEEEC--TTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECSS-SCEEEEEC
T ss_pred             EEEEecCCeeEEEeEEcC--CCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcCC-CCEEEEec
Confidence            389999999999998752  12356789999998765666778899999999999 999999999998654 57899999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..+..++.|++.||.|||++||+|||||             ++||
T Consensus        94 ~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Df  157 (281)
T 3cc6_A           94 YPYGELGHYLERNKN----------------SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDF  157 (281)
T ss_dssp             CTTCBHHHHHHHHTT----------------TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCC
T ss_pred             CCCCCHHHHHHhccc----------------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCcc
Confidence            999999999987643                38999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......    ....+|+.|+|||++.+..++.++||.
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  198 (281)
T 3cc6_A          158 GLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVW  198 (281)
T ss_dssp             CGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             CCCcccccccccccccCCCCcceeCchhhccCCCCchhccH
Confidence            9988654332    345667899999999999999999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.96  E-value=7.6e-30  Score=224.53  Aligned_cols=160  Identities=16%  Similarity=0.189  Sum_probs=130.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC------Cc
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD------GP  144 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~------~~  144 (258)
                      ...||+|+||.||+|...     .++..||||++.....     .+.+|+.+|+.+ +||||+++++++...      ..
T Consensus        59 ~~~lG~G~fg~Vy~~~~~-----~~~~~vaiK~~~~~~~-----~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           59 TKVIGNGSFGVVYQAKLC-----DSGELVAIKKVLQDKR-----FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEECSSEEEEEEEET-----TTCCEEEEEEEECCTT-----SCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTTEEE
T ss_pred             eeEEeeCCCEEEEEEEEC-----CCCcEEEEEEecccch-----hHHHHHHHHHHc-CCCCccceeeEEeccCCCCccee
Confidence            348999999999999997     5789999999975421     234799999999 999999999998642      13


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +++||||+++ +|.+.+.....             ....+++..++.++.||+.||.|||++||+|||||          
T Consensus       128 ~~lv~e~~~~-~l~~~~~~~~~-------------~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~  193 (420)
T 1j1b_A          128 LNLVLDYVPE-TVYRVARHYSR-------------AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT  193 (420)
T ss_dssp             EEEEEECCCE-EHHHHHHHHHH-------------TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTT
T ss_pred             EEeehhcccc-cHHHHHHHHhh-------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCC
Confidence            6799999986 77777664211             11349999999999999999999999999999995          


Q ss_pred             ----ccCCCcceeeeccC--CccccccccccccccccC-CCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                          |+|||+++......  ....||+.|+|||++.+. .|+.++||.
T Consensus       194 ~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  241 (420)
T 1j1b_A          194 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVW  241 (420)
T ss_dssp             TEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHH
T ss_pred             CeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhH
Confidence                88999998654332  467889999999999764 789999974

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.1e-29  Score=217.77  Aligned_cols=159  Identities=14%  Similarity=0.200  Sum_probs=132.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCC--CcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQH--INIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h--~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..||+|+||.||++...      ++..||||++.... .....+.+.+|+.++..+ +|  +||+++++++.+++..++|
T Consensus        15 ~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A           15 KQIGSGGSSKVFQVLNE------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             EEESCCSSEEEEEEECT------TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHH-TTTCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEecCCCeEEEEEEeC------CCCEEEEEEeeccccchHHHHHHHHHHHHHHhh-hhcCCceEEEeeeEeeCCEEEEE
Confidence            38999999999999874      46889999997543 445567899999999999 55  9999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------cc
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------FI  216 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------i~  216 (258)
                      || +.+|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||            ++
T Consensus        88 ~e-~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~  149 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKKKS-----------------IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI  149 (343)
T ss_dssp             EC-CCSEEHHHHHHHSCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEEC
T ss_pred             Ee-CCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEe
Confidence            99 557799999998665                 9999999999999999999999999999996            78


Q ss_pred             CCCcceeeeccC-----Ccccccccccccccccc-----------CCCCccccee
Q psy12228        217 GFDLCILVFFHD-----STLLKTTSTIASLILRN-----------QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~s~~~Dv~  255 (258)
                      |||+++......     ....||+.|+|||++.+           ..++.++||.
T Consensus       150 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diw  204 (343)
T 3dbq_A          150 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW  204 (343)
T ss_dssp             CCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHH
T ss_pred             ecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHH
Confidence            999998654332     35689999999999975           6789999974

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.96  E-value=2.6e-29  Score=210.15  Aligned_cols=160  Identities=19%  Similarity=0.272  Sum_probs=137.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~~  146 (258)
                      ..||+|+||.||+|...     .++..||+|++.... .....+.+.+|+.+++.+ +||||+++++++..    ...++
T Consensus        32 ~~lg~G~~g~Vy~~~~~-----~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           32 IEIGRGSFKTVYKGLDT-----ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeccCCCCeEEEEeEec-----CCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCceEE
Confidence            37999999999999987     578899999996432 455678899999999999 99999999999875    34589


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--ccccCcc----------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK--VGNDAVR----------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--iiH~DlK----------  214 (258)
                      +||||+++|+|.+++.....                 +++..++.++.||+.||.|||+++  |+|||||          
T Consensus       106 lv~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~  168 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRFKV-----------------MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT  168 (290)
T ss_dssp             EEEECCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTT
T ss_pred             EEEEecCCCCHHHHHHHccC-----------------CCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCC
Confidence            99999999999999988665                 899999999999999999999999  9999995          


Q ss_pred             ----ccCCCcceeeeccC-CccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||++....... ....||+.|+|||++.+ .++.++||.
T Consensus       169 ~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~  213 (290)
T 1t4h_A          169 GSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVY  213 (290)
T ss_dssp             SCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHH
T ss_pred             CCEEEeeCCCcccccccccccccCCcCcCCHHHHhc-cCCCcchHH
Confidence                78999987543332 45679999999999875 589999974

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.96  E-value=1.1e-29  Score=214.36  Aligned_cols=157  Identities=23%  Similarity=0.361  Sum_probs=127.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...       +..||+|.+...   ...+.+.+|+.+++++ +||||+++++++.+  ..++||||
T Consensus        14 ~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~--~~~lv~e~   80 (307)
T 2eva_A           14 EVVGRGAFGVVCKAKWR-------AKDVAIKQIESE---SERKAFIVELRQLSRV-NHPNIVKLYGACLN--PVCLVMEY   80 (307)
T ss_dssp             EEEECCSSSEEEEEEET-------TEEEEEEECSST---THHHHHHHHHHHHHHC-CCTTBCCEEEBCTT--TTEEEEEC
T ss_pred             eEeecCCCceEEEEEEC-------CeeEEEEEecCh---hHHHHHHHHHHHHhcC-CCCCcCeEEEEEcC--CcEEEEEc
Confidence            38999999999999875       378999999743   4457799999999999 99999999998863  47999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh---CCccccCcc--------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS---RKVGNDAVR--------------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~iiH~DlK--------------  214 (258)
                      +++|+|.+++.....              ...+++..++.++.|++.||.|||+   +||+|||||              
T Consensus        81 ~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~k  146 (307)
T 2eva_A           81 AEGGSLYNVLHGAEP--------------LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK  146 (307)
T ss_dssp             CTTCBHHHHHHCSSS--------------EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEE
T ss_pred             CCCCCHHHHHhccCC--------------CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEE
Confidence            999999999986542              1237899999999999999999999   899999995              


Q ss_pred             ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||++...........||+.|+|||++.+..++.++||.
T Consensus       147 l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  187 (307)
T 2eva_A          147 ICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVF  187 (307)
T ss_dssp             ECCCCC------------CCTTSSCHHHHTCCCCCTHHHHH
T ss_pred             EcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHH
Confidence            78999998655555566899999999999999999999984

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.96  E-value=1.3e-29  Score=215.71  Aligned_cols=165  Identities=26%  Similarity=0.343  Sum_probs=140.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv~  149 (258)
                      ..||+|+||.||+|.+.. ....++..||||++... .....+.+.+|+.+++.+ +||||+++++++..  ....++||
T Consensus        29 ~~lg~G~~g~V~~~~~~~-~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~  105 (327)
T 3lxl_A           29 SQLGKGNFGSVELCRYDP-LGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVM  105 (327)
T ss_dssp             EEEEEETTEEEEEEEECT-TSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCEEEEEE
T ss_pred             hhccCCCCeEEEEEEecc-CCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCceEEEEE
Confidence            389999999999999631 11256799999999865 555667899999999999 99999999999874  45689999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                .+++..++.++.|++.||.|||+++|+|||||             ++
T Consensus       106 e~~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~  169 (327)
T 3lxl_A          106 EYLPSGCLRDFLQRHRA----------------RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA  169 (327)
T ss_dssp             ECCTTCBHHHHHHHHGG----------------GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             eecCCCCHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEc
Confidence            99999999999987542                28999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......      ....+|+.|+|||++.+..++.++||.
T Consensus       170 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  214 (327)
T 3lxl_A          170 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVW  214 (327)
T ss_dssp             CGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHH
T ss_pred             ccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHH
Confidence            999998654332      345678889999999999999999974

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.96  E-value=1.9e-29  Score=219.95  Aligned_cols=161  Identities=14%  Similarity=0.183  Sum_probs=135.0

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcC-CCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQ-HINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~-h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...||+|+||.||+|...      .+..||||++.... .....+.+.+|+.+|+.+.+ ||||+++++++..++.+++|
T Consensus        61 ~~~LG~G~fg~Vy~~~~~------~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           61 LKQIGSGGSSKVFQVLNE------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             EEEEECCSSEEEEEEECT------TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEccCCCeEEEEEEcC------CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            348999999999999875      37889999997543 45566789999999999943 69999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------cc
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------FI  216 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------i~  216 (258)
                      || +.+|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||            |+
T Consensus       135 ~E-~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~  196 (390)
T 2zmd_A          135 ME-CGNIDLNSWLKKKKS-----------------IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI  196 (390)
T ss_dssp             EE-CCSEEHHHHHHHCSS-----------------CCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEEC
T ss_pred             Ee-cCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEE
Confidence            99 567899999988654                 8999999999999999999999999999995            78


Q ss_pred             CCCcceeeeccC-----Ccccccccccccccccc-----------CCCCccccee
Q psy12228        217 GFDLCILVFFHD-----STLLKTTSTIASLILRN-----------QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~s~~~Dv~  255 (258)
                      |||+++......     ...+||+.|+|||++.+           ..++.++||.
T Consensus       197 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diw  251 (390)
T 2zmd_A          197 DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW  251 (390)
T ss_dssp             CCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHH
T ss_pred             ecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHH
Confidence            999998654332     35689999999999975           4688999974

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=5.3e-29  Score=211.82  Aligned_cols=155  Identities=17%  Similarity=0.226  Sum_probs=135.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||||+++..    ..+.+.+|+.+++.+..||||+++++++.+  ....++||
T Consensus        42 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           42 RKLGRGKYSEVFEAINI-----TNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             EEecccCCeEEEEEEEC-----CCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            48999999999999987     57899999999753    235688999999999459999999999987  56789999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------c
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------F  215 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i  215 (258)
                      ||+++++|.+++..                    +++..+..++.||+.||.|||++||+|||||              +
T Consensus       113 e~~~~~~l~~~~~~--------------------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl  172 (330)
T 3nsz_A          113 EHVNNTDFKQLYQT--------------------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL  172 (330)
T ss_dssp             ECCCCCCHHHHGGG--------------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEE
T ss_pred             eccCchhHHHHHHh--------------------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEE
Confidence            99999999998854                    8899999999999999999999999999995              7


Q ss_pred             cCCCcceeeeccC--Ccccccccccccccccc-CCCCccccee
Q psy12228        216 IGFDLCILVFFHD--STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      +|||+++......  ....+|+.|+|||++.+ ..++.++||.
T Consensus       173 ~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw  215 (330)
T 3nsz_A          173 IDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMW  215 (330)
T ss_dssp             CCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHH
T ss_pred             EeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHH
Confidence            8999998654433  46788999999999987 6789999974

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=8.9e-30  Score=216.11  Aligned_cols=171  Identities=27%  Similarity=0.350  Sum_probs=126.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE----
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL----  145 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~----  145 (258)
                      ...||+|+||.||+|.....  +.....||||+++... .....+.+.+|+.+++.+ +||||+++++++......    
T Consensus        28 ~~~lg~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~  104 (323)
T 3qup_A           28 GRMLGKGEFGSVREAQLKQE--DGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAKGRLP  104 (323)
T ss_dssp             EEEEEEETTEEEEEEEC---------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-------
T ss_pred             eceecccCCeEEEEEEEccc--CCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhceeeccccccCCC
Confidence            34899999999999997621  0112389999997543 344567899999999999 999999999999876654    


Q ss_pred             --EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        146 --YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       146 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                        ++||||+++|+|.+++......           .....+++..++.++.||+.||.|||++||+|||||         
T Consensus       105 ~~~~v~e~~~~~~L~~~l~~~~~~-----------~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~  173 (323)
T 3qup_A          105 IPMVILPFMKHGDLHAFLLASRIG-----------ENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED  173 (323)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHHC--------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             ccEEEEEeccCCcHHHHHHhhhcc-----------ccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC
Confidence              9999999999999999765420           012248999999999999999999999999999996         


Q ss_pred             ----ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||+++......     ....+++.|+|||++.+..++.++||.
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  223 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVW  223 (323)
T ss_dssp             SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchh
Confidence                78999998654332     244567889999999999999999974

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=5.3e-30  Score=219.31  Aligned_cols=179  Identities=20%  Similarity=0.234  Sum_probs=136.0

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCC----CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG----HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ...||+|+||.||+|...     .++..||+|++...    ......+.+.+|+.+++.+ +||||+++++++.+.+..+
T Consensus        31 ~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           31 KGAIGQGSYGVVRVAIEN-----QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             EEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             cceeeecCCeEEEEEEEC-----CCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCeEE
Confidence            338999999999999987     67889999998642    1334567899999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCC-----------------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESP-----------------------LGSAYTNGNVLTEKDLISFAYQVANGMHYL  203 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~~~~~~i~~qi~~gl~yL  203 (258)
                      +||||+++|+|.+++............                       .+........+++..++.++.||+.||.||
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999999632210000000                       000000012246788899999999999999


Q ss_pred             hhCCccccCcc---------------ccCCCcceeeecc-------CCcccccccccccccccc--CCCCccccee
Q psy12228        204 QSRKVGNDAVR---------------FIGFDLCILVFFH-------DSTLLKTTSTIASLILRN--QKVSVLLDLI  255 (258)
Q Consensus       204 H~~~iiH~DlK---------------i~dfgl~~~~~~~-------~~~~~gt~~y~aPE~~~~--~~~s~~~Dv~  255 (258)
                      |+++|+|||||               ++|||+++.....       .....||+.|+|||++.+  ..++.++||.
T Consensus       185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw  260 (345)
T 3hko_A          185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW  260 (345)
T ss_dssp             HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred             HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence            99999999995               7899999864332       246689999999999975  6789999974

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.96  E-value=5.7e-29  Score=215.13  Aligned_cols=162  Identities=17%  Similarity=0.213  Sum_probs=140.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC---h----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS---D----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~  144 (258)
                      ..||+|+||.||+|...     .++..||||+++....   .    ...+.+.+|+.+++.+.+||||+++++++...+.
T Consensus       100 ~~lg~G~~g~Vy~a~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  174 (365)
T 2y7j_A          100 DVIGRGVSSVVRRCVHR-----ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF  174 (365)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred             eEEecCCCEEEEEEEEC-----CCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence            58999999999999987     5789999999975431   1    2246688999999999679999999999999999


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++||||+++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||          
T Consensus       175 ~~lv~e~~~g~~L~~~l~~~~~-----------------l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~  237 (365)
T 2y7j_A          175 MFLVFDLMRKGELFDYLTEKVA-----------------LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM  237 (365)
T ss_dssp             EEEEECCCTTCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             EEEEEEeCCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            9999999999999999987655                 9999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccC--Ccccccccccccccccc------CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD--STLLKTTSTIASLILRN------QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~------~~~s~~~Dv~  255 (258)
                         ++|||++.......  ....||+.|+|||++.+      ..++.++||.
T Consensus       238 ~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~  289 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLW  289 (365)
T ss_dssp             CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHH
T ss_pred             CEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHH
Confidence               78999998655433  46789999999999864      3688999974

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=7.8e-29  Score=207.80  Aligned_cols=161  Identities=16%  Similarity=0.198  Sum_probs=139.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC----C----hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH----S----DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP  144 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~----~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~  144 (258)
                      .||+|+||.||+|...     .++..||||+++...    .    ....+.+.+|+.+++++.+||||+++++++.+++.
T Consensus        24 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   98 (298)
T 1phk_A           24 ILGRGVSSVVRRCIHK-----PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF   98 (298)
T ss_dssp             EEEECSSEEEEEEEET-----TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             eecCCCceEEEEEEEc-----CcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe
Confidence            8999999999999987     578999999997542    1    12346788999999999559999999999999999


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++||||+++|+|.+++.....                 +++..+..++.||+.||.|||++|++|||||          
T Consensus        99 ~~lv~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  161 (298)
T 1phk_A           99 FFLVFDLMKKGELFDYLTEKVT-----------------LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM  161 (298)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             EEEEEeccCCCcHHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCC
Confidence            9999999999999999988655                 9999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccC--Cccccccccccccccc------cCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD--STLLKTTSTIASLILR------NQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~------~~~~s~~~Dv~  255 (258)
                         ++|||++.......  ....+|+.|+|||++.      ...++.++||.
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~  213 (298)
T 1phk_A          162 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW  213 (298)
T ss_dssp             CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHH
T ss_pred             cEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccH
Confidence               78999998654432  4567899999999985      45678899974

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.96  E-value=1.7e-30  Score=221.93  Aligned_cols=157  Identities=16%  Similarity=0.207  Sum_probs=124.9

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-------ChHHHHHHHHHHHHHHHhc--------CCCcccc-
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-------SDAEMMDLVSEMEMMKMIG--------QHINIIN-  134 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~--------~h~nIv~-  134 (258)
                      ...||+|+||.||+|...       +..||||+++...       .....+.+.+|+.+++.+.        .||||++ 
T Consensus        25 ~~~lG~G~~g~V~~~~~~-------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           25 CEKIGEGVFGEVFQTIAD-------HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             CEEEEEETTEEEEEEEET-------TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             eeeecccCceEEEEEEeC-------CceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            348999999999999874       3899999997542       2223467899999999983        2555554 


Q ss_pred             ----------------eeeeEEc-------------CCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy12228        135 ----------------LLGVCTQ-------------DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLT  185 (258)
Q Consensus       135 ----------------l~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~  185 (258)
                                      +++++.+             .+.++|||||+++|++.+.+.+ ..                 ++
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~-----------------~~  159 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KL-----------------SS  159 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TC-----------------CC
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cC-----------------CC
Confidence                            4444443             6789999999999987777644 22                 89


Q ss_pred             HHHHHHHHHHHHHHHHHHh-hCCccccCcc---------------------------------ccCCCcceeeeccCCcc
Q psy12228        186 EKDLISFAYQVANGMHYLQ-SRKVGNDAVR---------------------------------FIGFDLCILVFFHDSTL  231 (258)
Q Consensus       186 ~~~~~~i~~qi~~gl~yLH-~~~iiH~DlK---------------------------------i~dfgl~~~~~~~~~~~  231 (258)
                      +..++.|+.||+.||.||| +++|+|||||                                 |+|||+|+...  ....
T Consensus       160 ~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~--~~~~  237 (336)
T 2vuw_A          160 LATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER--DGIV  237 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE--TTEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC--CCcE
Confidence            9999999999999999999 9999999985                                 46899988544  3456


Q ss_pred             ccccccccccccccCCCCccccee
Q psy12228        232 LKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       232 ~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      .||+.|+|||++.+.. +.++||.
T Consensus       238 ~gt~~y~aPE~~~g~~-~~~~Diw  260 (336)
T 2vuw_A          238 VFCDVSMDEDLFTGDG-DYQFDIY  260 (336)
T ss_dssp             ECCCCTTCSGGGCCCS-SHHHHHH
T ss_pred             EEeecccChhhhcCCC-ccceehh
Confidence            8999999999999866 8899974

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=4.1e-30  Score=221.45  Aligned_cols=166  Identities=17%  Similarity=0.182  Sum_probs=137.0

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      ...||+|+||.||++....  ...++..||||+++...   .....+.+.+|+.+++.+.+||||+++++++.+.+..++
T Consensus        59 ~~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l  136 (355)
T 1vzo_A           59 LKVLGTGAYGKVFLVRKIS--GHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHL  136 (355)
T ss_dssp             EEEEEETTTEEEEEEEECS--STTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEE
T ss_pred             EEEeccCCCEEEEEEEEcc--cCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEE
Confidence            4489999999999999741  11367899999996431   112234577899999999679999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+++|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             
T Consensus       137 v~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k  199 (355)
T 1vzo_A          137 ILDYINGGELFTHLSQRER-----------------FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV  199 (355)
T ss_dssp             EECCCCSCBHHHHHHHHSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             EeecCCCCCHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEE
Confidence            9999999999999988765                 9999999999999999999999999999995             


Q ss_pred             ccCCCcceeeeccC----Ccccccccccccccccc--CCCCccccee
Q psy12228        215 FIGFDLCILVFFHD----STLLKTTSTIASLILRN--QKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~--~~~s~~~Dv~  255 (258)
                      |+|||+++......    ....||+.|+|||++.+  ..++.++||.
T Consensus       200 l~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dvw  246 (355)
T 1vzo_A          200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWW  246 (355)
T ss_dssp             ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHH
T ss_pred             EeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHH
Confidence            78999998653322    35689999999999986  4578999974

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=9.6e-30  Score=211.40  Aligned_cols=162  Identities=20%  Similarity=0.286  Sum_probs=119.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||+|++.....  ....+.+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus        17 ~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           17 NLLGKGSFAGVYRAESI-----HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             eeecCCCceEEEEEEEc-----cCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEEE
Confidence            38999999999999986     5778999999964211  12246789999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++.....                .+++..++.++.|++.||.|||++||+|||||             ++
T Consensus        91 e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~  154 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRVK----------------PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIA  154 (278)
T ss_dssp             ECCTTEEHHHHHHTCSS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEEC
T ss_pred             ecCCCCcHHHHHhhccC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEE
Confidence            99999999999987532                38999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......   ....||+.|+|||++.+..++.++||.
T Consensus       155 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  196 (278)
T 3cok_A          155 DFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVW  196 (278)
T ss_dssp             CCTTCEECC----------------------------CTHHH
T ss_pred             eecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHH
Confidence            999998654322   356789999999999999999999974

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=2e-29  Score=214.91  Aligned_cols=160  Identities=20%  Similarity=0.298  Sum_probs=134.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...     .++..||+|++.... .....+.+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        32 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~  105 (331)
T 4aaa_A           32 LVGEGSYGMVMKCRNK-----DTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEF  105 (331)
T ss_dssp             EGGGGTTSSEEEEEET-----TTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEeecCCEEEEEEEEC-----CCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEEEEEec
Confidence            8999999999999987     578999999986543 334456788999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....                 +++..+..++.||+.||.|||++||+|||||             ++||
T Consensus       106 ~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Df  168 (331)
T 4aaa_A          106 VDHTILDDLELFPNG-----------------LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDF  168 (331)
T ss_dssp             CSEEHHHHHHHSTTC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred             CCcchHHHHHhhccC-----------------CCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeC
Confidence            999888888765544                 9999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC---CccccccccccccccccC-CCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      |+++......   ....||+.|+|||++.+. .++.++||.
T Consensus       169 g~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~  209 (331)
T 4aaa_A          169 GFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVW  209 (331)
T ss_dssp             TTC------------CCCCCTTCCHHHHTTCTTCCTHHHHH
T ss_pred             CCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHH
Confidence            9997644332   456789999999999875 789999974

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.96  E-value=9.3e-30  Score=216.52  Aligned_cols=178  Identities=31%  Similarity=0.413  Sum_probs=135.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceE--EEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIIT--TVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++.  .||+|.++........+.+.+|+.+++++.+||||+++++++.+.+..++||
T Consensus        31 ~~lg~G~~g~Vy~~~~~-----~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  105 (327)
T 1fvr_A           31 DVIGEGNFGQVLKARIK-----KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI  105 (327)
T ss_dssp             EEEECGGGCEEEEEEEE-----ETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eeeecCCCceEEEEEEc-----cCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEE
Confidence            38999999999999987     3444  4599999865455566779999999999978999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++........ .....-.......+++..++.++.||+.||.|||++||+|||||             ++
T Consensus       106 e~~~~~~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~  184 (327)
T 1fvr_A          106 EYAPHGNLLDFLRKSRVLET-DPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  184 (327)
T ss_dssp             CCCTTCBHHHHHHTTCHHHH-CHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             ecCCCCCHHHHHHhcccccc-cccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEc
Confidence            99999999999987540000 00000000011348999999999999999999999999999995             78


Q ss_pred             CCCcceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++.....  .....+++.|+|||++.+..++.++||.
T Consensus       185 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  225 (327)
T 1fvr_A          185 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW  225 (327)
T ss_dssp             CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHH
T ss_pred             ccCcCccccccccccCCCCCccccChhhhccccCCchhcch
Confidence            99998743222  2345667899999999998999999974

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.96  E-value=9.3e-30  Score=212.81  Aligned_cols=160  Identities=22%  Similarity=0.251  Sum_probs=132.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...      ++..||+|+++.... ....+.+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus         8 ~~lg~G~~g~V~~~~~~------~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            8 EKIGEGTYGVVYKAQNN------YGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             EEEEEETTEEEEEEEET------TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEE
T ss_pred             hhcccCCCEEEEEEEcC------CCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEEEE
Confidence            38999999999999874      568899999975432 22346788999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++ +|.+++.....                .+++..+..++.||+.||.|||++||+|||||             ++|
T Consensus        81 ~~~~-~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D  143 (288)
T 1ob3_A           81 HLDQ-DLKKLLDVCEG----------------GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIAD  143 (288)
T ss_dssp             CCSE-EHHHHHHTSTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred             ecCC-CHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeE
Confidence            9986 99999986532                38999999999999999999999999999995             789


Q ss_pred             CCcceeeecc---CCcccccccccccccccc-CCCCccccee
Q psy12228        218 FDLCILVFFH---DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ||+++.....   .....+|+.|+|||++.+ ..++.++||.
T Consensus       144 fg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  185 (288)
T 1ob3_A          144 FGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW  185 (288)
T ss_dssp             TTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHH
T ss_pred             CccccccCccccccccccccccccCchheeCCCCCCcHHHHH
Confidence            9998754322   235578999999999976 4589999974

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.96  E-value=3.1e-30  Score=219.45  Aligned_cols=161  Identities=17%  Similarity=0.265  Sum_probs=130.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|+++..........+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus         8 ~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            8 DKLGEGTYATVYKGKSK-----LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             EEEcCCCCEEEEEEEEC-----CCCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEEecc
Confidence            38999999999999987     578999999997543333333566899999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++ +|.+++.....                .+++..+..++.||+.||.|||++||+|||||             ++||
T Consensus        82 ~~~-~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Df  144 (324)
T 3mtl_A           82 LDK-DLKQYLDDCGN----------------IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADF  144 (324)
T ss_dssp             CSE-EHHHHHHHTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSS
T ss_pred             ccc-CHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccC
Confidence            984 99999987543                38999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      |+++......   ....||+.|+|||++.+ ..++.++||.
T Consensus       145 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  185 (324)
T 3mtl_A          145 GLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMW  185 (324)
T ss_dssp             SEEECC------------CGGGCCHHHHTTCCCCCTHHHHH
T ss_pred             cccccccCCccccccccCcccccChhhhcCCCCCCcHHHHH
Confidence            9998644332   35578999999999877 5689999974

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.96  E-value=2.8e-29  Score=210.71  Aligned_cols=153  Identities=18%  Similarity=0.285  Sum_probs=127.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHH--hcCCCcccceeeeEEcC----CcEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKM--IGQHINIINLLGVCTQD----GPLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~~h~nIv~l~~~~~~~----~~~~  146 (258)
                      .||+|+||.||+|...       +..||||++...    ....+.+|.+++..  + +||||+++++++...    ...+
T Consensus        15 ~lg~G~~g~V~~~~~~-------~~~vavK~~~~~----~~~~~~~e~~~~~~~~l-~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A           15 CVGKGRYGEVWRGSWQ-------GENVAVKIFSSR----DEKSWFRETELYNTVML-RHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             EEEECSSEEEEEEEET-------TEEEEEEEECGG----GHHHHHHHHHHHHHTCC-CCTTBCCEEEEEEEEETTEEEEE
T ss_pred             eeccCCCcEEEEEEEC-------CEEEEEEEeccc----cchhhHHHHHHHHHhhc-cCcCeeeEEEeeccccCCCceeE
Confidence            8999999999999875       478999999642    33556778888777  6 899999999997643    4589


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCccccCcc----
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQ--------SRKVGNDAVR----  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH--------~~~iiH~DlK----  214 (258)
                      +||||+++|+|.++++..                  .+++..++.++.|++.||.|||        +++|+|||||    
T Consensus        83 lv~e~~~~g~L~~~l~~~------------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Ni  144 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLT------------------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI  144 (301)
T ss_dssp             EEECCCTTCBHHHHHTTC------------------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGE
T ss_pred             EehhhccCCCHHHHHhhc------------------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhE
Confidence            999999999999999643                  2899999999999999999999        9999999996    


Q ss_pred             ---------ccCCCcceeeeccC-------CccccccccccccccccC------CCCccccee
Q psy12228        215 ---------FIGFDLCILVFFHD-------STLLKTTSTIASLILRNQ------KVSVLLDLI  255 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~s~~~Dv~  255 (258)
                               ++|||+++......       ....||+.|+|||++.+.      .+++++||.
T Consensus       145 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (301)
T 3q4u_A          145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW  207 (301)
T ss_dssp             EECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHH
T ss_pred             EEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHH
Confidence                     78999998654433       234899999999999886      556788874

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.96  E-value=1.7e-29  Score=213.05  Aligned_cols=163  Identities=18%  Similarity=0.283  Sum_probs=133.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC----ChHHHHHHHHHHHHHHHhc--CCCcccceeeeEEcCC--
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH----SDAEMMDLVSEMEMMKMIG--QHINIINLLGVCTQDG--  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~--~h~nIv~l~~~~~~~~--  143 (258)
                      ..||+|+||.||+|...     .+++.||||+++...    .......+.+|+.+++.+.  +||||+++++++....  
T Consensus        15 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~   89 (308)
T 3g33_A           15 AEIGVGAYGTVYKARDP-----HSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD   89 (308)
T ss_dssp             EEECCSSSCCEEEEECT-----TTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSS
T ss_pred             EEEecCCCeEEEEEEEC-----CCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCC
Confidence            38999999999999987     578999999996321    1111235667777776662  5999999999998755  


Q ss_pred             ---cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------
Q psy12228        144 ---PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------  214 (258)
Q Consensus       144 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------  214 (258)
                         ..+++|||+. |+|.+++.....               ..+++..++.++.||+.||.|||+++|+|||||      
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~~~~~~~---------------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~  153 (308)
T 3g33_A           90 REIKVTLVFEHVD-QDLRTYLDKAPP---------------PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV  153 (308)
T ss_dssp             SEEEEEEEEECCC-CBHHHHHHTCCT---------------TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE
T ss_pred             CceeEEEEehhhh-cCHHHHHhhccC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence               4899999998 599999987653               338999999999999999999999999999995      


Q ss_pred             -------ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 -------FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -------i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                             ++|||+++......  ....||+.|+|||++.+..++.++||.
T Consensus       154 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  203 (308)
T 3g33_A          154 TSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMW  203 (308)
T ss_dssp             CTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHH
T ss_pred             cCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHH
Confidence                   78999997544332  467889999999999999999999974

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.96  E-value=5e-29  Score=215.24  Aligned_cols=160  Identities=19%  Similarity=0.269  Sum_probs=137.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-----CcE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-----GPL  145 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-----~~~  145 (258)
                      ...||+|+||.||+|...     .++..||||++.........+.+.+|+.+++.+ +||||+++++++...     ...
T Consensus        32 ~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           32 LSYIGEGAYGMVCSAYDN-----LNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             EEEEEECSSEEEEEEEET-----TTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCE
T ss_pred             EEEeecCCCeEEEEEEEC-----CCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccccceE
Confidence            348999999999999987     578999999998655666668899999999999 999999999999764     368


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++||||+.+ +|.+++....                  +++..++.++.||+.||.|||++||+|||||           
T Consensus       106 ~iv~e~~~~-~L~~~l~~~~------------------~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~  166 (364)
T 3qyz_A          106 YIVQDLMET-DLYKLLKTQH------------------LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD  166 (364)
T ss_dssp             EEEEECCSE-EHHHHHHHCC------------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC
T ss_pred             EEEEcccCc-CHHHHHHhCC------------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCC
Confidence            999999985 9999997642                  8999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeeccC------Ccccccccccccccccc-CCCCccccee
Q psy12228        215 --FIGFDLCILVFFHD------STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                        ++|||+++......      ....||+.|+|||++.+ ..++.++||.
T Consensus       167 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  216 (364)
T 3qyz_A          167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW  216 (364)
T ss_dssp             EEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHH
T ss_pred             EEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHH
Confidence              78999998654332      34589999999998754 4589999974

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.96  E-value=5.6e-30  Score=231.84  Aligned_cols=160  Identities=25%  Similarity=0.348  Sum_probs=135.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.+.      .+..||||+++....  ..+.|.+|+.+|+.+ +||||+++++++.+ +..+||||
T Consensus       272 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~lv~e  341 (535)
T 2h8h_A          272 EVKLGQGCFGEVWMGTWN------GTTRVAIKTLKPGTM--SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTE  341 (535)
T ss_dssp             EEEEEECSSEEEEEEEET------TTEEEEEEEECTTSS--CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEEC
T ss_pred             heecccCCCeEEEEEEEC------CCceEEEEEeCCCCC--CHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceEeee
Confidence            447999999999999986      236799999986432  245799999999999 99999999999876 67899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.++|.....               ..+++..++.|+.||+.||.|||+++|+|||||             |+|
T Consensus       342 ~~~~gsL~~~l~~~~~---------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~D  406 (535)
T 2h8h_A          342 YMSKGSLLDFLKGETG---------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVAD  406 (535)
T ss_dssp             CCTTEEHHHHHSHHHH---------------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             hhcCCcHHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcc
Confidence            9999999999986421               238999999999999999999999999999995             889


Q ss_pred             CCcceeeecc----CCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFH----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++.....    .....++..|+|||++.+..++.++||.
T Consensus       407 FG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvw  448 (535)
T 2h8h_A          407 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW  448 (535)
T ss_dssp             TTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHH
T ss_pred             cccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHH
Confidence            9999864322    1344567889999999999999999984

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=5.8e-29  Score=208.48  Aligned_cols=158  Identities=14%  Similarity=0.084  Sum_probs=137.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||||++.....   .+.+.+|+.+++.+.+|+||+++++++.+....++||||+
T Consensus        17 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   88 (298)
T 1csn_A           17 RIGEGSFGVIFEGTNL-----LNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   88 (298)
T ss_dssp             EEEECSSCEEEEEEET-----TTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEeecCCEEEEEEEEC-----CCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence            8999999999999986     5779999999975422   2357889999999988999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------------
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------------  214 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------------  214 (258)
                       +++|.+++.....                .+++..+..++.||+.||.|||++||+|||||                  
T Consensus        89 -~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~k  151 (298)
T 1csn_A           89 -GPSLEDLLDLCGR----------------KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIY  151 (298)
T ss_dssp             -CCBHHHHHHHTTT----------------CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEE
T ss_pred             -CCCHHHHHHHhcc----------------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEE
Confidence             8899999987542                38999999999999999999999999999985                  


Q ss_pred             ccCCCcceeeecc----------CCccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFH----------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||+++.....          .....||+.|+|||++.+..++.++||.
T Consensus       152 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  202 (298)
T 1csn_A          152 VVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLE  202 (298)
T ss_dssp             ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             EEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHH
Confidence            7899999865433          2356799999999999999999999974

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=2.5e-29  Score=207.51  Aligned_cols=158  Identities=24%  Similarity=0.371  Sum_probs=136.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...      ++..||+|+++....  ..+.+.+|+.+++.+ +||||+++++++.+++..++||||+
T Consensus        15 ~lg~G~~g~V~~~~~~------~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A           15 EIGSGQFGLVHLGYWL------NKDKVAIKTIREGAM--SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             EEEEETTEEEEEEEET------TTEEEEEEEECTTTB--CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             EecCCCceeEEEEEec------CCCeEEEEEccccCC--CHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEEEeCC
Confidence            8999999999999985      457899999986432  235789999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..+..++.|++.||.|||+++++|||||             ++|||
T Consensus        86 ~~~~L~~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg  149 (267)
T 3t9t_A           86 EHGCLSDYLRTQRG----------------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG  149 (267)
T ss_dssp             TTCBHHHHHHHTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTT
T ss_pred             CCCcHHHHHhhCcc----------------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccc
Confidence            99999999987542                38999999999999999999999999999995             78999


Q ss_pred             cceeeecc----CCccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFH----DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~----~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++......    .....+++.|+|||++.+..++.++||.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  189 (267)
T 3t9t_A          150 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW  189 (267)
T ss_dssp             GGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             cccccccccccccccccccccccChhhhcCCCccchhchh
Confidence            98754322    2345677889999999999999999974

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=2.6e-29  Score=213.39  Aligned_cols=164  Identities=19%  Similarity=0.296  Sum_probs=131.7

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc------CC
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ------DG  143 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~------~~  143 (258)
                      ....||+|+||.||+|...     .++..||||++....  ...+.+.+|+.+++.+.+||||+++++++..      .+
T Consensus        28 ~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~  100 (326)
T 2x7f_A           28 LVELVGNGTYGQVYKGRHV-----KTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD  100 (326)
T ss_dssp             EEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred             EEEEeccCCCEEEEEEEEC-----CCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence            3448999999999999987     577899999997542  2345788999999999779999999999986      45


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      ..++||||+++|+|.+++.....               ..+++..++.++.||+.||.|||++||+|||||         
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~---------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~  165 (326)
T 2x7f_A          101 QLWLVMEFCGAGSVTDLIKNTKG---------------NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN  165 (326)
T ss_dssp             EEEEEEECCTTEEHHHHHHHSGG---------------GCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT
T ss_pred             eEEEEEEcCCCCcHHHHHHhccc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCC
Confidence            78999999999999999987532               238999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeecc---CCccccccccccccccc-----cCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFH---DSTLLKTTSTIASLILR-----NQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~s~~~Dv~  255 (258)
                          ++|||++......   .....||+.|+|||++.     +..++.++||.
T Consensus       166 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~  218 (326)
T 2x7f_A          166 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLW  218 (326)
T ss_dssp             CCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHH
T ss_pred             CCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHH
Confidence                7899998764432   24567999999999997     56789999974

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.96  E-value=2.6e-29  Score=210.30  Aligned_cols=161  Identities=23%  Similarity=0.329  Sum_probs=134.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|.+..   ..++..||||+++... .....+.+.+|+.+++.+ +||||+++++++ ..+..++||||
T Consensus        24 ~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~   98 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYYQM---KKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESWMLVMEM   98 (291)
T ss_dssp             EEEECSSEEEEEEEEEC---SSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred             ccccccCeeeEeeeecC---CCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCcEEEEEe
Confidence            79999999999997641   1467899999997543 233467899999999999 999999999999 56678999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                 +++..++.++.||+.||.|||+++|+|||||             ++||
T Consensus        99 ~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Df  161 (291)
T 1xbb_A           99 AELGPLNKYLQQNRH-----------------VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDF  161 (291)
T ss_dssp             CTTEEHHHHHHHCTT-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCC
T ss_pred             CCCCCHHHHHHhCcC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccC
Confidence            999999999988654                 8999999999999999999999999999995             7899


Q ss_pred             CcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++.......      ....+++.|+|||++.+..++.++||.
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  204 (291)
T 1xbb_A          162 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW  204 (291)
T ss_dssp             TTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHH
T ss_pred             CcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHH
Confidence            9998654332      234556889999999998999999974

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.96  E-value=3.1e-29  Score=209.81  Aligned_cols=164  Identities=20%  Similarity=0.265  Sum_probs=138.0

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..+||+|+||.||+|...     .++..||+|.+... .....+.+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus        27 ~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e   99 (295)
T 2clq_A           27 RVVLGKGTYGIVYAGRDL-----SNQVRIAIKEIPER-DSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFME   99 (295)
T ss_dssp             BCEEEECSSSEEEEEEET-----TTCCEEEEEEEECC-CC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cEEEeecCcEEEEEEEEC-----CCCeEEEEEEccCC-chHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEE
Confidence            348999999999999987     57789999999765 334457799999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------cc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------FI  216 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i~  216 (258)
                      |+++++|.+++.....              ...+++..+..++.|++.||.|||++||+|||||              ++
T Consensus       100 ~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~  165 (295)
T 2clq_A          100 QVPGGSLSALLRSKWG--------------PLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKIS  165 (295)
T ss_dssp             CCSEEEHHHHHHHTTC--------------CCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEEC
T ss_pred             eCCCCCHHHHHHhhcc--------------CCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEe
Confidence            9999999999987542              1236799999999999999999999999999995              78


Q ss_pred             CCCcceeeecc---CCccccccccccccccccCC--CCccccee
Q psy12228        217 GFDLCILVFFH---DSTLLKTTSTIASLILRNQK--VSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~--~s~~~Dv~  255 (258)
                      |||++......   .....||+.|+|||++.+..  ++.++||.
T Consensus       166 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~  209 (295)
T 2clq_A          166 DFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW  209 (295)
T ss_dssp             CTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHH
T ss_pred             ecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHH
Confidence            99999865332   24568899999999997743  78999974

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.96  E-value=4.1e-29  Score=210.84  Aligned_cols=164  Identities=16%  Similarity=0.245  Sum_probs=130.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCC--CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .++..||+|+++..  ........+.+|+.+++.+ +||||+++++++...+..++|||
T Consensus        39 ~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  112 (310)
T 2wqm_A           39 KIGRGQFSEVYRAACL-----LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLE  112 (310)
T ss_dssp             EEECC--CEEEEEEET-----TTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eecCCCCceEEEEEEc-----CCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEEEEe
Confidence            8999999999999987     57789999999752  2455667899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....             ....+++..++.++.|++.||.|||++|++|||||             ++|
T Consensus       113 ~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~D  179 (310)
T 2wqm_A          113 LADAGDLSRMIKHFKK-------------QKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGD  179 (310)
T ss_dssp             CCCSCBHHHHHHHHHH-------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECC
T ss_pred             cCCCCCHHHHHHHhcc-------------cccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEe
Confidence            9999999999976321             11348999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......   ....|++.|+|||++.+..++.++||.
T Consensus       180 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  220 (310)
T 2wqm_A          180 LGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIW  220 (310)
T ss_dssp             C------------------CCSSCCHHHHTTCCCCHHHHHH
T ss_pred             ccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHH
Confidence            99987644332   356789999999999999999999974

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.96  E-value=2.1e-29  Score=210.32  Aligned_cols=159  Identities=23%  Similarity=0.282  Sum_probs=134.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH--H----HHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA--E----MMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~----~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      .||+|+||.||+|...     .++..||+|++.......  .    .+.+.+|+.+++.+ +||||+++++++.+..  +
T Consensus        26 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--~   97 (287)
T 4f0f_A           26 QIGKGGFGLVHKGRLV-----KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNPP--R   97 (287)
T ss_dssp             ECCCCSSSCEEEEEET-----TTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTTT--E
T ss_pred             ccccCCceeEEEEEEc-----CCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCCC--e
Confidence            8999999999999987     578999999996543221  1    16789999999999 9999999999997654  7


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--ccccCcc----------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK--VGNDAVR----------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--iiH~DlK----------  214 (258)
                      +||||+++|+|.+++.....                .+++..++.++.|++.||.|||+++  |+|||||          
T Consensus        98 lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~  161 (287)
T 4f0f_A           98 MVMEFVPCGDLYHRLLDKAH----------------PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD  161 (287)
T ss_dssp             EEEECCTTCBHHHHHHCTTS----------------CCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCC
T ss_pred             EEEEecCCCCHHHHHhcccC----------------CccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccC
Confidence            99999999999999876542                3999999999999999999999999  9999985          


Q ss_pred             --------ccCCCcceeeeccCCcccccccccccccc--ccCCCCccccee
Q psy12228        215 --------FIGFDLCILVFFHDSTLLKTTSTIASLIL--RNQKVSVLLDLI  255 (258)
Q Consensus       215 --------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~--~~~~~s~~~Dv~  255 (258)
                              ++|||+++..........||+.|+|||++  ....++.++||.
T Consensus       162 ~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~  212 (287)
T 4f0f_A          162 ENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY  212 (287)
T ss_dssp             TTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHH
T ss_pred             CCCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHH
Confidence                    77999988655555677899999999999  445678899974

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.96  E-value=2.5e-29  Score=209.17  Aligned_cols=157  Identities=20%  Similarity=0.274  Sum_probs=135.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-----------
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-----------  141 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-----------  141 (258)
                      .||+|+||.||+|...     .++..||+|.++...     +.+.+|+.+++.+ +||||+++++++..           
T Consensus        18 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-----~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           18 LIGSGGFGQVFKAKHR-----IDGKTYVIKRVKYNN-----EKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             EEECSSSCCEEEEEET-----TTCCEEEEEEEECCS-----GGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC-------
T ss_pred             eeccCCceEEEEEEEc-----CCCeEEEEEEecccc-----HHHHHHHHHHHhC-CCCCEEEEeeeEeccccCccccccc
Confidence            8999999999999987     577999999997642     2467899999999 99999999998864           


Q ss_pred             -----CCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--
Q psy12228        142 -----DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--  214 (258)
Q Consensus       142 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--  214 (258)
                           ....++||||+++|+|.+++.....               ..+++..++.++.||+.||.|||++||+|||||  
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~  151 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRG---------------EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPS  151 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHHGGG---------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhhccC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHH
Confidence                 3458999999999999999986532               238999999999999999999999999999995  


Q ss_pred             -----------ccCCCcceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        215 -----------FIGFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----------i~dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                 ++|||++......  .....||+.|+|||++.+..++.++||.
T Consensus       152 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  205 (284)
T 2a19_B          152 NIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLY  205 (284)
T ss_dssp             GEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHH
T ss_pred             HEEEcCCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhH
Confidence                       7899999865443  2456789999999999999999999974

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.96  E-value=2.1e-30  Score=220.45  Aligned_cols=164  Identities=23%  Similarity=0.318  Sum_probs=133.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.+..... ....+||+|.+...........+.+|+.+++.+ +||||+++++++. ++..++||||+
T Consensus        20 ~lG~G~~g~Vy~~~~~~~~~-~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~~   96 (325)
T 3kex_A           20 VLGSGVFGTVHKGVWIPEGE-SIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSSLQLVTQYL   96 (325)
T ss_dssp             EEECCSSCEEEEEEECCTTC-SCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred             eeeecCCceEEEEEEcCCCc-eEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCccEEEEEeC
Confidence            89999999999999863111 123468999886543334445678899999999 9999999999986 45789999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..++.|+.||+.||.|||++||+|||||             ++|||
T Consensus        97 ~~~~L~~~l~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg  160 (325)
T 3kex_A           97 PLGSLLDHVRQHRG----------------ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFG  160 (325)
T ss_dssp             TTCBSHHHHHSSGG----------------GSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCS
T ss_pred             CCCCHHHHHHHccc----------------cCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCC
Confidence            99999999987532                38999999999999999999999999999996             78999


Q ss_pred             cceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......     ....+|+.|+|||++.+..++.++||.
T Consensus       161 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  201 (325)
T 3kex_A          161 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVW  201 (325)
T ss_dssp             GGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHH
T ss_pred             cccccCcccccccccCCCCcccccChHHhccCCCChhhHhH
Confidence            998654332     345677899999999999999999974

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.96  E-value=5.1e-29  Score=219.81  Aligned_cols=162  Identities=17%  Similarity=0.221  Sum_probs=141.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhc-----CCCcccceeeeEEcCCcE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG-----QHINIINLLGVCTQDGPL  145 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~nIv~l~~~~~~~~~~  145 (258)
                      ..+||+|+||.||+|...     .++..||||+++.  .......+.+|+.+++.+.     +|+||+++++++...+.+
T Consensus       102 ~~~LG~G~fg~V~~a~~~-----~~~~~vAvK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A          102 LKVIGKGSFGQVVKAYDH-----KVHQHVALKMVRN--EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             EEEEEESSSEEEEEEEET-----TTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             EEEcccCccEEEEEEEEC-----CCCcEEEEEEECC--ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            348999999999999987     5789999999975  3444567888999998873     467999999999999999


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++||||+. |+|.+++.....               ..+++..++.|+.||+.||.|||+++|+|||||           
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~  238 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNKF---------------QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR  238 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTTT---------------CCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTS
T ss_pred             EEEEeccC-CCHHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCC
Confidence            99999997 599999987653               348999999999999999999999999999985           


Q ss_pred             ----ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||++...........||+.|+|||++.+..++.++||.
T Consensus       239 ~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  283 (429)
T 3kvw_A          239 SGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMW  283 (429)
T ss_dssp             CCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHH
T ss_pred             cceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHH
Confidence                78999998765556778999999999999999999999974

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.7e-29  Score=215.26  Aligned_cols=165  Identities=22%  Similarity=0.311  Sum_probs=132.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.+..... ....+||+|.+.........+.+.+|+.+++.+ +||||+++++++.++. .++++||
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~-~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~-~~~v~~~   97 (327)
T 3lzb_A           21 KVLGSGAFGTVYKGLWIPEGE-KVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQL   97 (327)
T ss_dssp             EEEEECSSEEEEEEEECCTTC-SCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS-EEEEECC
T ss_pred             EEeeeCCCeEEEEEEEcCCCc-eEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC-ceEEEEe
Confidence            489999999999999863111 123467899887655555667899999999999 9999999999998764 8899999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..++.|+.||+.||.|||+++|+|||||             ++||
T Consensus        98 ~~~g~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~Df  161 (327)
T 3lzb_A           98 MPFGCLLDYVREHKD----------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF  161 (327)
T ss_dssp             CSSCBHHHHHHHTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCT
T ss_pred             cCCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccC
Confidence            999999999987543                38999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......     ....+|+.|+|||++.+..++.++||.
T Consensus       162 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  203 (327)
T 3lzb_A          162 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW  203 (327)
T ss_dssp             TC----------------CCCGGGSCHHHHHHCCCCHHHHHH
T ss_pred             cceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHH
Confidence            9998653332     344567889999999999999999974

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=6.4e-29  Score=215.18  Aligned_cols=159  Identities=21%  Similarity=0.229  Sum_probs=128.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------  143 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------  143 (258)
                      ...||+|+||.||+|...     .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++...+      
T Consensus        30 ~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           30 LKPIGSGAQGIVCAAYDA-----ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             EEEEEECSSEEEEEEEET-----TTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTTTCC
T ss_pred             eeeeEecCCEEEEEEEEC-----CCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeecccccccccc
Confidence            348999999999999987     577999999997543 445567899999999999 9999999999997654      


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      ..++||||+++ +|.+++..  .                 +++..+..++.||+.||.|||++||+|||||         
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~--~-----------------~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~  163 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM--E-----------------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD  163 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS--C-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             ceEEEEEcCCC-CHHHHHhh--c-----------------cCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC
Confidence            68999999985 89888853  2                 8999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||+++.....  .....||+.|+|||++.+..++.++||.
T Consensus       164 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  210 (371)
T 2xrw_A          164 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW  210 (371)
T ss_dssp             SCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHH
T ss_pred             CCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHH
Confidence                7899999865433  2456899999999999999999999974

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=2.9e-29  Score=213.02  Aligned_cols=159  Identities=19%  Similarity=0.270  Sum_probs=132.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-------ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-------SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~  145 (258)
                      .||+|+||.||+|...     .++..||||++....       .......+.+|+.+++.+ +||||+++++++..+. .
T Consensus        17 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~   89 (322)
T 2ycf_A           17 TLGSGACGEVKLAFER-----KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-Y   89 (322)
T ss_dssp             EEEECSSEEEEEEEET-----TTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESSS-E
T ss_pred             EEecCCCEEEEEEEEc-----CCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCCc-e
Confidence            8999999999999987     578999999996532       112234588999999999 9999999999987654 8


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++||||+++|+|.+++.....                 +++..+..++.||+.||.|||++||+|||||           
T Consensus        90 ~lv~e~~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~  152 (322)
T 2ycf_A           90 YIVLELMEGGELFDKVVGNKR-----------------LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE  152 (322)
T ss_dssp             EEEEECCTTEETHHHHSTTCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSS
T ss_pred             EEEEecCCCCcHHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCC
Confidence            999999999999999986554                 9999999999999999999999999999985           


Q ss_pred             -----ccCCCcceeeeccC--Cccccccccccccccc---cCCCCccccee
Q psy12228        215 -----FIGFDLCILVFFHD--STLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                           ++|||+++......  ....||+.|+|||++.   ...++.++||.
T Consensus       153 ~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~  203 (322)
T 2ycf_A          153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW  203 (322)
T ss_dssp             SCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHH
T ss_pred             CCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHH
Confidence                 78999998654332  3567899999999974   56789999974

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=2.3e-29  Score=208.78  Aligned_cols=161  Identities=20%  Similarity=0.268  Sum_probs=131.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|...     .++..||||++....  .....+.+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus        17 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           17 DTLGVGTFGKVKIGEHQ-----LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             eeecCCCCeEEEEEEEC-----CCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEEEE
Confidence            38999999999999987     577899999996421  112345789999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++++|.+++.....                 +++..+..++.|++.||.|||++||+|||||             ++
T Consensus        91 e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~  153 (276)
T 2h6d_A           91 EYVSGGELFDYICKHGR-----------------VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIA  153 (276)
T ss_dssp             ECCCSCBHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEEC
T ss_pred             eccCCCcHHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEe
Confidence            99999999999988765                 8999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCC-Cccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                      |||++.......  ....+|+.|+|||++.+..+ +.++||.
T Consensus       154 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  195 (276)
T 2h6d_A          154 DFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIW  195 (276)
T ss_dssp             CCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHH
T ss_pred             ecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHH
Confidence            999987654332  45678999999999998776 6889974

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.96  E-value=6.6e-29  Score=215.10  Aligned_cols=159  Identities=22%  Similarity=0.286  Sum_probs=132.5

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcE----
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPL----  145 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~----  145 (258)
                      ...||+|+||.||+|...     .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++...+..    
T Consensus        47 ~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           47 PTHVGSGAYGSVCSAIDK-----RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             EEEEEECSSEEEEEEEET-----TTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSSTTCC
T ss_pred             EeEEecCCCeEEEEEEEC-----CCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCcccce
Confidence            348999999999999987     678999999997543 344567899999999999 999999999999876654    


Q ss_pred             --EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        146 --YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       146 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                        ++||||+. |+|.+++..                   .+++..+..++.||+.||.|||++||+|||||         
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~-------------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~  180 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGM-------------------EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED  180 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTS-------------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             eEEEEEcccc-ccHHHHhhc-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCC
Confidence              99999998 589887732                   28999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                          ++|||+++..........||+.|+|||++.+ ..++.++||.
T Consensus       181 ~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  226 (371)
T 4exu_A          181 CELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIW  226 (371)
T ss_dssp             CCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHH
T ss_pred             CCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHH
Confidence                7899999876666677889999999999987 7889999974

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.96  E-value=1.9e-30  Score=225.13  Aligned_cols=167  Identities=10%  Similarity=0.032  Sum_probs=131.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCC--CChHHHHHHHHHHH---HHHHhcCCCccccee-------ee
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEME---MMKMIGQHINIINLL-------GV  138 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~---~l~~l~~h~nIv~l~-------~~  138 (258)
                      ...||+|+||.||+|...     .++..||||+++..  ......+.+.+|+.   .++.+ +|||||+++       ++
T Consensus        78 ~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l-~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           78 GTVLGQEDPYAYLEATDQ-----ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI-KNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             EEEEEEETTEEEEEEEC------CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTC-CSHHHHHHHHCBCCCSEE
T ss_pred             cceeecCCCEEEEEEEEC-----CCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhcccc-CCHHHHHHHhhhhhhhhh
Confidence            448999999999999986     57789999999642  23445678999995   55555 899999998       66


Q ss_pred             EEcCC-----------------cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy12228        139 CTQDG-----------------PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMH  201 (258)
Q Consensus       139 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~  201 (258)
                      +.+.+                 ..+++|||+ +|+|.+++......          ......+++..++.|+.||+.||.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~----------~~~~~~l~~~~~~~i~~qi~~aL~  220 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH----------SSTHKSLVHHARLQLTLQVIRLLA  220 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHT----------TTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcccc----------ccccccccHHHHHHHHHHHHHHHH
Confidence            55443                 288999999 57999999875430          000122445888899999999999


Q ss_pred             HHhhCCccccCcc-------------ccCCCcceeeeccCCccccccccccccccccC-----------CCCccccee
Q psy12228        202 YLQSRKVGNDAVR-------------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQ-----------KVSVLLDLI  255 (258)
Q Consensus       202 yLH~~~iiH~DlK-------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~~~Dv~  255 (258)
                      |||++||+|||||             ++|||+++..........| +.|+|||++.+.           .++.++||.
T Consensus       221 ~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dvw  297 (377)
T 3byv_A          221 SLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAW  297 (377)
T ss_dssp             HHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHH
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHH
Confidence            9999999999995             7899999864444456677 999999999987           899999974

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.96  E-value=2e-29  Score=218.09  Aligned_cols=159  Identities=22%  Similarity=0.285  Sum_probs=118.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC------Cc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD------GP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~------~~  144 (258)
                      ..||+|+||.||+|...     .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++...      ..
T Consensus        35 ~~lG~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~  108 (367)
T 2fst_X           35 SPVGSGAYGSVCAAFDT-----KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFND  108 (367)
T ss_dssp             EECC----CCEEEEEET-----TTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCC
T ss_pred             eEEeecCCeEEEEEEEC-----CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCccccCCe
Confidence            38999999999999987     678999999997542 445567899999999999 999999999999754      56


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .++++|++ +++|.+++... .                 +++..+..++.||+.||.|||++||+|||||          
T Consensus       109 ~~lv~e~~-~~~L~~~~~~~-~-----------------l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~  169 (367)
T 2fst_X          109 VYLVTHLM-GADLNNIVKCQ-K-----------------LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC  169 (367)
T ss_dssp             CEEEEECC-CEECC-----C-C-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             EEEEeccc-CCCHHHHHhcC-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCC
Confidence            89999999 57999988752 2                 8999999999999999999999999999995          


Q ss_pred             ---ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                         ++|||+++..........||+.|+|||++.+ ..++.++||.
T Consensus       170 ~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  214 (367)
T 2fst_X          170 ELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW  214 (367)
T ss_dssp             CEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHH
T ss_pred             CEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHH
Confidence               7899999876555567789999999999987 6889999974

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.96  E-value=3.5e-29  Score=206.79  Aligned_cols=158  Identities=20%  Similarity=0.291  Sum_probs=132.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC--CcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD--GPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~--~~~~lv~  149 (258)
                      .||+|+||.||+|...       +..||||+++... .....+.+.+|+.+++.+ +||||+++++++.+.  +..++||
T Consensus        17 ~lg~G~~g~V~~~~~~-------~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           17 KLNENHSGELWKGRWQ-------GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             EEEEETTEEEEEEEET-------TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HhcCCCcceEEEEEEC-------CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeEeee
Confidence            8999999999999985       3789999997543 445567899999999999 999999999999877  6789999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--ccccCcc-------------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK--VGNDAVR-------------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--iiH~DlK-------------  214 (258)
                      ||+++|+|.+++.....               ..+++..++.++.|++.||.|||+++  |+|||||             
T Consensus        89 e~~~~~~L~~~l~~~~~---------------~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~  153 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTN---------------FVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTAR  153 (271)
T ss_dssp             ECCTTCBHHHHHHSCSS---------------CCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEE
T ss_pred             cccCCCcHHHHHhhccc---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCccee
Confidence            99999999999987542               34899999999999999999999999  9999997             


Q ss_pred             ccCCCcceeeeccCCccccccccccccccccCCCCc---cccee
Q psy12228        215 FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSV---LLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~---~~Dv~  255 (258)
                      ++|||++..  .......||+.|+|||++.+..++.   ++||.
T Consensus       154 l~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~  195 (271)
T 3kmu_A          154 ISMADVKFS--FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMW  195 (271)
T ss_dssp             EEGGGSCCT--TSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHH
T ss_pred             EEeccceee--ecccCccCCccccChhhhccCCCCCCCchhhHH
Confidence            344444432  2234568899999999998766554   78874

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.96  E-value=4.1e-29  Score=206.76  Aligned_cols=158  Identities=25%  Similarity=0.322  Sum_probs=124.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC---hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS---DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..||+|+||.||+|...       +..||||+++....   ....+.+.+|+.+++.+ +||||+++++++.+++..++|
T Consensus        13 ~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A           13 EIIGIGGFGKVYRAFWI-------GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             EEEEEETTEEEEEEEET-------TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CEEE
T ss_pred             eeeccCCCeEEEEEEEc-------CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceEEE
Confidence            38999999999999975       37899999975422   22346789999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC---ccccCcc-----------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK---VGNDAVR-----------  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~---iiH~DlK-----------  214 (258)
                      |||+++|+|.+++...                  .+++..++.++.|++.||.|||+++   |+|||||           
T Consensus        85 ~e~~~~~~L~~~~~~~------------------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~  146 (271)
T 3dtc_A           85 MEFARGGPLNRVLSGK------------------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVE  146 (271)
T ss_dssp             EECCTTEEHHHHHTSS------------------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCS
T ss_pred             EEcCCCCCHHHHhhcC------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccc
Confidence            9999999999998643                  2899999999999999999999999   8999985           


Q ss_pred             ----------ccCCCcceeeeccC-CccccccccccccccccCCCCccccee
Q psy12228        215 ----------FIGFDLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----------i~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                ++|||++....... ....||+.|+|||++.+..++.++||.
T Consensus       147 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  198 (271)
T 3dtc_A          147 NGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVW  198 (271)
T ss_dssp             SSCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHH
T ss_pred             cccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHH
Confidence                      57888887543332 456889999999999999999999974

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=7.4e-29  Score=207.44  Aligned_cols=157  Identities=22%  Similarity=0.290  Sum_probs=124.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...        ..||+|+++... .....+.+.+|+.+++.+ +||||+++++++ ..+..++||||
T Consensus        31 ~lG~G~~g~Vy~~~~~--------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~  100 (289)
T 3og7_A           31 RIGSGSFGTVYKGKWH--------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLAIVTQW  100 (289)
T ss_dssp             EEEECSSEEEEEEESS--------SEEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred             EecCCCCeEEEEEEEc--------CceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccEEEEEe
Confidence            8999999999999876        359999997543 455667899999999999 999999999966 45578999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++++|.+++.....                .+++..++.++.|++.||.|||+++|+|||||             ++||
T Consensus       101 ~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Df  164 (289)
T 3og7_A          101 CEGSSLYHHLHASET----------------KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDF  164 (289)
T ss_dssp             CCEEEHHHHHTTC-------------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCC
T ss_pred             cCCCcHHHHHhhccC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccc
Confidence            999999999976442                38999999999999999999999999999995             7899


Q ss_pred             Ccceeeecc-----CCccccccccccccccc---cCCCCccccee
Q psy12228        219 DLCILVFFH-----DSTLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~-----~~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                      |++......     .....||+.|+|||++.   +..++.++||.
T Consensus       165 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~  209 (289)
T 3og7_A          165 GLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY  209 (289)
T ss_dssp             C------------------CCCTTCCHHHHC----CCSCHHHHHH
T ss_pred             eeccccccccccccccccCCCccccCchhhcccCCCCCCcccchH
Confidence            998754322     13567899999999997   66788899974

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=6.4e-29  Score=209.90  Aligned_cols=159  Identities=16%  Similarity=0.286  Sum_probs=135.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .++..||+|.+....   ..+.+.+|+.+++.+ +||||+++++++...+..++||||
T Consensus        35 ~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~  105 (314)
T 3com_A           35 EKLGEGSYGSVYKAIHK-----ETGQIVAIKQVPVES---DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEY  105 (314)
T ss_dssp             EECC----CEEEEEEET-----TTCCEEEEEEEETTS---CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eeeccCCCeEEEEEEEC-----CCCCEEEEEecCchH---HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEeec
Confidence            37999999999999987     578999999997542   235688999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..+..++.|++.||.|||++|++|+|||             ++||
T Consensus       106 ~~~~~L~~~~~~~~~----------------~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~df  169 (314)
T 3com_A          106 CGAGSVSDIIRLRNK----------------TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADF  169 (314)
T ss_dssp             CTTEEHHHHHHHHTC----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCC
T ss_pred             CCCCCHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeec
Confidence            999999999975432                38999999999999999999999999999995             7899


Q ss_pred             Ccceeeecc---CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++......   .....||+.|+|||++.+..++.++||.
T Consensus       170 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  209 (314)
T 3com_A          170 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIW  209 (314)
T ss_dssp             TTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHH
T ss_pred             ccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHH
Confidence            999865433   2456789999999999999999999974

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=5.2e-29  Score=208.83  Aligned_cols=160  Identities=16%  Similarity=0.280  Sum_probs=131.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----------
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----------  141 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----------  141 (258)
                      ..||+|+||.||+|...     .++..||||+++.  .....+.+.+|+.+++.+ +||||+++++++.+          
T Consensus        12 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A           12 AVLGQGAFGQVVKARNA-----LDSRYYAIKKIRH--TEEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEE--EHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC----
T ss_pred             heeccCCcEEEEEEEEc-----CCCeEEEEEEEec--cHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhhhhcc
Confidence            38999999999999987     5789999999964  345567899999999999 99999999998865          


Q ss_pred             ---CCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----
Q psy12228        142 ---DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----  214 (258)
Q Consensus       142 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----  214 (258)
                         .+..++||||+++|+|.+++.....                .+++..++.++.|++.||.|||++||+|||||    
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Ni  147 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSENL----------------NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNI  147 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSCG----------------GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             cccCCceEEEEecCCCCCHHHhhhcccc----------------ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhE
Confidence               3468999999999999999986542                37889999999999999999999999999995    


Q ss_pred             ---------ccCCCcceeeecc-----------------CCccccccccccccccccC-CCCccccee
Q psy12228        215 ---------FIGFDLCILVFFH-----------------DSTLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~-----------------~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                               ++|||++......                 .....||+.|+|||++.+. .++.++||.
T Consensus       148 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  215 (303)
T 1zy4_A          148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY  215 (303)
T ss_dssp             EECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHH
T ss_pred             EEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHH
Confidence                     7899998754211                 1356789999999999864 689999974

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.96  E-value=1e-28  Score=228.25  Aligned_cols=165  Identities=24%  Similarity=0.315  Sum_probs=138.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ...||+|+||.||+|.+..  ....+..||+|.++........+.+.+|+.+++.+ +||||+++++++. ++..++|||
T Consensus       395 ~~~LG~G~fG~Vy~a~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~~lv~E  470 (656)
T 2j0j_A          395 GRCIGEGQFGDVHQGIYMS--PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIME  470 (656)
T ss_dssp             EEEEECCSSCCEEEEEECC--SSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             eeEEeeCCCEEEEEEEEec--CCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cCceEEEEE
Confidence            4579999999999999862  11345789999998765666778899999999999 9999999999985 457899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..++.++.|++.||.|||++||+|||||             ++|
T Consensus       471 ~~~~g~L~~~l~~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~D  534 (656)
T 2j0j_A          471 LCTLGELRSFLQVRKF----------------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGD  534 (656)
T ss_dssp             CCTTCBHHHHHHHTTT----------------TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC
T ss_pred             cCCCCcHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEe
Confidence            9999999999986542                38999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......    ....+|+.|+|||++.+..++.++||.
T Consensus       535 FG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw  576 (656)
T 2j0j_A          535 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW  576 (656)
T ss_dssp             CCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             cCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHH
Confidence            99998654332    244567899999999999999999974

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.96  E-value=1.7e-28  Score=208.89  Aligned_cols=160  Identities=21%  Similarity=0.254  Sum_probs=138.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCc------ccceeeeEEcCCcEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHIN------IINLLGVCTQDGPLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~n------Iv~l~~~~~~~~~~~  146 (258)
                      .||+|+||.||+|....    .++..||||+++.  .....+.+.+|+.+++.+ +|++      |+++++++.+.+..+
T Consensus        21 ~lg~G~~g~V~~~~~~~----~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~~~~~~~~~   93 (339)
T 1z57_A           21 TLGEGAFGKVVECIDHK----AGGRHVAVKIVKN--VDRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEWFEHHGHIC   93 (339)
T ss_dssp             EEEEETTEEEEEEEETT----TTTEEEEEEEECS--SHHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred             EEecCCCeEEEEEEecC----CCCcEEEEEEEec--CCchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecccccCCcEE
Confidence            89999999999998741    4678999999975  345567789999999998 6654      999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+ +++|.+++.....               ..+++..+..++.||+.||.|||++||+|||||            
T Consensus        94 lv~e~~-~~~l~~~l~~~~~---------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  157 (339)
T 1z57_A           94 IVFELL-GLSTYDFIKENGF---------------LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYT  157 (339)
T ss_dssp             EEEECC-CCBHHHHHHHTTT---------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEE
T ss_pred             EEEcCC-CCCHHHHHHhcCC---------------CCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccc
Confidence            999999 7899999987653               248999999999999999999999999999985            


Q ss_pred             --------------------ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 --------------------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --------------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                          ++|||+++..........||+.|+|||++.+..++.++||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  218 (339)
T 1z57_A          158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVW  218 (339)
T ss_dssp             EEEC----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHH
T ss_pred             cccCCccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhH
Confidence                                56888888655555677899999999999999999999974

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=3.3e-29  Score=208.14  Aligned_cols=164  Identities=18%  Similarity=0.248  Sum_probs=137.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv~  149 (258)
                      .||+|+||.||++...     .+++.||+|++.... .....+.+.+|+.+++.+ +||||+++++++.+  .+..++||
T Consensus        13 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~   86 (279)
T 2w5a_A           13 TIGTGSYGRCQKIRRK-----SDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVM   86 (279)
T ss_dssp             EEEECSSSEEEEEEET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred             hccCCCCcEEEEEEEC-----CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEEEEE
Confidence            8999999999999987     578999999997543 455667899999999999 99999999998854  56799999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----ccccCcc----------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK-----VGNDAVR----------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-----iiH~DlK----------  214 (258)
                      ||+++|+|.+++.....             ....+++..++.++.|++.||.|||+++     |+|||||          
T Consensus        87 e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~  153 (279)
T 2w5a_A           87 EYCEGGDLASVITKGTK-------------ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ  153 (279)
T ss_dssp             ECCTTEEHHHHHHHHHH-------------TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSS
T ss_pred             eCCCCCCHHHHHHhhcc-------------cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCC
Confidence            99999999999986532             1234899999999999999999999999     9999995          


Q ss_pred             ---ccCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++......   ....||+.|+|||++.+..++.++||.
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  200 (279)
T 2w5a_A          154 NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIW  200 (279)
T ss_dssp             CEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHH
T ss_pred             CEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHH
Confidence               78999987544332   345789999999999999999999974

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=3.6e-29  Score=216.14  Aligned_cols=166  Identities=11%  Similarity=0.110  Sum_probs=130.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHH----------HHHHHHHHHHHHHhcCCCcccceeeeEEc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE----------MMDLVSEMEMMKMIGQHINIINLLGVCTQ  141 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~~h~nIv~l~~~~~~  141 (258)
                      ..||+|+||.||+|.+........+..||||++........          ...+..|+..+..+ +||||+++++++..
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~  119 (364)
T 3op5_A           41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLGVPKYWGSGLH  119 (364)
T ss_dssp             EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCCSCCEEEEEEE
T ss_pred             EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCCCCeEEeeeee
Confidence            38999999999999986322222457899999976421100          01233455556666 79999999999976


Q ss_pred             C----CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---
Q psy12228        142 D----GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---  214 (258)
Q Consensus       142 ~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---  214 (258)
                      .    ...+|||||+ +|+|.+++.....                .+++..++.|+.||+.||.|||+++|+|||||   
T Consensus       120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~~~----------------~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~N  182 (364)
T 3op5_A          120 DKNGKSYRFMIMDRF-GSDLQKIYEANAK----------------RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASN  182 (364)
T ss_dssp             EETTEEEEEEEEECE-EEEHHHHHHHTTS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             ccCCcceEEEEEeCC-CCCHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHH
Confidence            4    3589999999 8999999987532                39999999999999999999999999999996   


Q ss_pred             ------------ccCCCcceeeeccC----------CccccccccccccccccCCCCccccee
Q psy12228        215 ------------FIGFDLCILVFFHD----------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ------------i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                  |+|||+++......          ....||+.|+|||++.+..++.++||.
T Consensus       183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  245 (364)
T 3op5_A          183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLE  245 (364)
T ss_dssp             EEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             EEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHH
Confidence                        78999998654321          234599999999999999999999984

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=3e-29  Score=210.68  Aligned_cols=160  Identities=22%  Similarity=0.371  Sum_probs=132.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|++... .....+.+.+|+.+++.+ +||||+++++++.+++..++||||+
T Consensus        26 ~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   98 (302)
T 2j7t_A           26 ELGDGAFGKVYKAKNK-----ETGALAAAKVIETK-SEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLWIMIEFC   98 (302)
T ss_dssp             EEECSTTCCEEEEEET-----TTCCEEEEEEEC-----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEEEEEECC
T ss_pred             eeccCCCeEEEEEEEc-----CCCcEEEEEEecCC-CHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEEEEEEeC
Confidence            7999999999999987     57789999999754 334457899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..+..++.||+.||.|||++|++|||||             ++|||
T Consensus        99 ~~~~l~~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  162 (302)
T 2j7t_A           99 PGGAVDAIMLELDR----------------GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFG  162 (302)
T ss_dssp             TTEEHHHHHHHHTS----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCH
T ss_pred             CCCcHHHHHHhhcc----------------CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECC
Confidence            99999999987542                28999999999999999999999999999995             78999


Q ss_pred             cceeeec---cCCcccccccccccccc-----ccCCCCccccee
Q psy12228        220 LCILVFF---HDSTLLKTTSTIASLIL-----RNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~---~~~~~~gt~~y~aPE~~-----~~~~~s~~~Dv~  255 (258)
                      ++.....   ......||+.|+|||++     .+..++.++||.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~  206 (302)
T 2j7t_A          163 VSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW  206 (302)
T ss_dssp             HHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHH
T ss_pred             CCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHH
Confidence            8753221   12456899999999998     467789999974

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.96  E-value=1.2e-28  Score=209.76  Aligned_cols=165  Identities=28%  Similarity=0.410  Sum_probs=138.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC--cEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG--PLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~--~~~lv~  149 (258)
                      ..||+|+||.||+|.+.. ....++..||||++... .....+.+.+|+.+++.+ +||||+++++++...+  ..++||
T Consensus        47 ~~lg~G~~g~V~~~~~~~-~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~  123 (326)
T 2w1i_A           47 QQLGKGNFGSVEMCRYDP-LQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIM  123 (326)
T ss_dssp             EEEECCSSEEEEEEEECT-TSSSCCEEEEEEEESSC-CSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----CCEEEE
T ss_pred             eeeccCCCeEEEEEEecc-ccCCCceEEEEEEeccC-CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCceEEEE
Confidence            389999999999998631 11257799999999865 455667899999999999 9999999999987654  689999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      ||+++|+|.+++.....                .+++..++.++.|++.||.|||++||+|||||             ++
T Consensus       124 e~~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~  187 (326)
T 2w1i_A          124 EYLPYGSLRDYLQKHKE----------------RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG  187 (326)
T ss_dssp             CCCTTCBHHHHHHHSTT----------------SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEEC
T ss_pred             ECCCCCCHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEe
Confidence            99999999999987642                38999999999999999999999999999995             78


Q ss_pred             CCCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||++.......      ....++..|+|||++.+..++.++||.
T Consensus       188 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  232 (326)
T 2w1i_A          188 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW  232 (326)
T ss_dssp             CCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHH
T ss_pred             cCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHH
Confidence            999998654332      234567789999999998999999974

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.96  E-value=1.8e-28  Score=210.46  Aligned_cols=159  Identities=19%  Similarity=0.270  Sum_probs=135.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-----CcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-----GPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-----~~~~  146 (258)
                      ..||+|+||.||+|...     .++..||||+++..........+.+|+.+++.+ +||||+++++++...     ...+
T Consensus        17 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~   90 (353)
T 2b9h_A           17 SLLGEGAYGVVCSATHK-----PTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFENFNEVY   90 (353)
T ss_dssp             EEEEECSSEEEEEEEET-----TTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCSTTCCCEE
T ss_pred             eEEcCCCCeEEEEEEEC-----CCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccCccceEE
Confidence            38999999999999987     578999999997655566667899999999999 999999999988754     5789


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+. |+|.+++... .                 +++..+..++.|++.||.|||++||+|||||            
T Consensus        91 lv~e~~~-~~L~~~~~~~-~-----------------~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~  151 (353)
T 2b9h_A           91 IIQELMQ-TDLHRVISTQ-M-----------------LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDL  151 (353)
T ss_dssp             EEECCCS-EEHHHHHHHC-C-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCE
T ss_pred             EEEeccC-ccHHHHHhhc-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcE
Confidence            9999998 5999999763 2                 8999999999999999999999999999995            


Q ss_pred             -ccCCCcceeeeccC-------------Ccccccccccccccccc-CCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD-------------STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~-------------~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                       ++|||+++......             ....||+.|+|||++.+ ..++.++||.
T Consensus       152 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~  207 (353)
T 2b9h_A          152 KVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVW  207 (353)
T ss_dssp             EECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHH
T ss_pred             EEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHH
Confidence             78999998654221             23578999999998764 7789999974

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.96  E-value=7.3e-29  Score=206.18  Aligned_cols=158  Identities=28%  Similarity=0.369  Sum_probs=133.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...      .+..||+|+++...  ...+.+.+|+.+++.+ +||||+++++++. .+..++||||+
T Consensus        20 ~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           20 RLGAGQFGEVWMGYYN------GHTKVAVKSLKQGS--MSPDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             EEEEETTEEEEEEEET------TTEEEEEEEECTTS--SCHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             eecCCCCeEEEEEEEc------CCcEEEEEEecCCc--ccHHHHHHHHHHHHhC-CCcCcceEEEEEc-CCCcEEEEecC
Confidence            8999999999999975      45789999997642  2346799999999999 9999999999986 45689999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....               ..+++..+..++.|++.||.|||++||+|||||             ++|||
T Consensus        90 ~~~~L~~~l~~~~~---------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  154 (279)
T 1qpc_A           90 ENGSLVDFLKTPSG---------------IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG  154 (279)
T ss_dssp             TTCBHHHHTTSHHH---------------HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred             CCCCHHHHHhcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCc
Confidence            99999999976431               138999999999999999999999999999995             78999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++.......    ....+++.|+|||++.+..++.++||.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  194 (279)
T 1qpc_A          155 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW  194 (279)
T ss_dssp             TCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHH
T ss_pred             ccccccCcccccccCCCCccCccChhhhccCCCCchhhhH
Confidence            998654332    344567889999999988999999974

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.96  E-value=1.7e-28  Score=207.39  Aligned_cols=170  Identities=27%  Similarity=0.360  Sum_probs=130.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC-----cE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG-----PL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~-----~~  145 (258)
                      ..||+|+||.||+|....  ...++..||+|+++... .....+.+.+|+.+++.+ +||||+++++++.+.+     ..
T Consensus        40 ~~lg~G~~g~V~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~  116 (313)
T 3brb_A           40 KILGEGEFGSVMEGNLKQ--EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPKP  116 (313)
T ss_dssp             EEEEC-CCCCEEEEEEEC--TTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC-------CE
T ss_pred             cceeecCCeEEEEEEEec--cCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeeccccCCccc
Confidence            379999999999998762  22367899999997543 445567899999999999 9999999999998754     35


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++||||+++|+|.+++......           .....+++..++.++.||+.||.|||+++|+|||||           
T Consensus       117 ~~v~e~~~~~~L~~~l~~~~~~-----------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~  185 (313)
T 3brb_A          117 MVILPFMKYGDLHTYLLYSRLE-----------TGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMT  185 (313)
T ss_dssp             EEEEECCTTCBHHHHHHHTTBT-----------TSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSC
T ss_pred             EEEEecccCCCHHHHHHHhhhh-----------cCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc
Confidence            9999999999999999654310           112459999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        ++|||+++......     ....+++.|+|||++.+..++.++||.
T Consensus       186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  233 (313)
T 3brb_A          186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVW  233 (313)
T ss_dssp             EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHH
T ss_pred             EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhH
Confidence              78999998654332     345667899999999999999999974

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.96  E-value=1.1e-28  Score=208.74  Aligned_cols=165  Identities=16%  Similarity=0.216  Sum_probs=135.1

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPLY  146 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~~  146 (258)
                      ...||+|+||.||++...     .++..||||++... .....+.+.+|+.+++.+ +||||+++++++..    ....+
T Consensus        34 ~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           34 IQKLGEGGFSYVDLVEGL-----HDGHFYALKRILCH-EQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             EEEEEC--CEEEEEEEET-----TTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEEEE
T ss_pred             EEEecCCCCeEEEEEEec-----CCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCceeE
Confidence            338999999999999987     57899999999754 555667899999999999 99999999999973    34789


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+++|+|.+++.....             ....+++..++.++.||+.||.|||+++|+|||||            
T Consensus       107 lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~  173 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKD-------------KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQP  173 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHT-------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCE
T ss_pred             EEEEeCCCCcHHHHHHHHHh-------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCE
Confidence            99999999999999987422             12348999999999999999999999999999995            


Q ss_pred             -ccCCCcceeeeccC------------CccccccccccccccccCC---CCccccee
Q psy12228        215 -FIGFDLCILVFFHD------------STLLKTTSTIASLILRNQK---VSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~------------~~~~gt~~y~aPE~~~~~~---~s~~~Dv~  255 (258)
                       ++|||++.......            ....||+.|+|||++.+..   +++++||.
T Consensus       174 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~  230 (317)
T 2buj_A          174 VLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVW  230 (317)
T ss_dssp             EECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHH
T ss_pred             EEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHH
Confidence             78999887543211            2345799999999997654   68899974

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.96  E-value=4.7e-29  Score=231.85  Aligned_cols=160  Identities=15%  Similarity=0.170  Sum_probs=134.7

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc-----
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP-----  144 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~-----  144 (258)
                      ....||+|+||.||+|....    .+++.||||++...........+.+|+.+++.+ +||||+++++++...+.     
T Consensus        84 i~~~lg~G~~g~Vy~a~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           84 VKGCIAHGGLGWIYLALDRN----VNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             EEEEEEEETTEEEEEEEEGG----GTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTSCEE
T ss_pred             EEEEEeeCCCeEEEEEEEcC----CCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCCCce
Confidence            34489999999999999862    256899999997655666677899999999999 99999999999987665     


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .+|||||+++++|.+++..  .                 +++.+++.|+.||+.||.|||++||+|||||          
T Consensus       159 ~~lv~E~~~g~~L~~~~~~--~-----------------l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~  219 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ--K-----------------LPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ  219 (681)
T ss_dssp             EEEEEECCCCEECC----C--C-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSC
T ss_pred             eEEEEEeCCCCcHHHHHhC--C-----------------CCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCc
Confidence            7999999999999987654  2                 8999999999999999999999999999996          


Q ss_pred             --ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        ++|||+++.... .....||+.|+|||++.+. ++.++||.
T Consensus       220 ~kl~DFG~a~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~sDi~  260 (681)
T 2pzi_A          220 LKLIDLGAVSRINS-FGYLYGTPGFQAPEIVRTG-PTVATDIY  260 (681)
T ss_dssp             EEECCCTTCEETTC-CSCCCCCTTTSCTTHHHHC-SCHHHHHH
T ss_pred             EEEEecccchhccc-CCccCCCccccCHHHHcCC-CCCceehh
Confidence              789999986433 2567899999999999875 48899974

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.96  E-value=2.5e-29  Score=208.98  Aligned_cols=157  Identities=28%  Similarity=0.405  Sum_probs=127.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-CcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-GPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-~~~~lv~e~  151 (258)
                      .||+|+||.||++...       +..||||+++..   ...+.+.+|+.+++.+ +||||+++++++.+. +..++||||
T Consensus        28 ~lg~G~~g~V~~~~~~-------~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           28 TIGKGEFGDVMLGDYR-------GNKVAVKCIKND---ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             EEEECSSCEEEEEEET-------TEEEEEEECCCC---C--HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECC
T ss_pred             EEecCCCceEEEEEEc-------CCEEEEEEecch---hHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEEEEec
Confidence            8999999999999875       478999999754   2456799999999999 999999999997654 478999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....               ..+++..+..++.|++.||.|||++||+|||||             ++||
T Consensus        97 ~~~~~L~~~l~~~~~---------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Df  161 (278)
T 1byg_A           97 MAKGSLVDYLRSRGR---------------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDF  161 (278)
T ss_dssp             CTTEEHHHHHHHHHH---------------HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCC
T ss_pred             CCCCCHHHHHHhccc---------------ccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeec
Confidence            999999999987542               237899999999999999999999999999995             7899


Q ss_pred             CcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |++...........+++.|+|||++.+..++.++||.
T Consensus       162 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  198 (278)
T 1byg_A          162 GLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW  198 (278)
T ss_dssp             CC------------CCTTTSCHHHHHHCCCCHHHHHH
T ss_pred             cccccccccccCCCccccccCHHHhCCCCCCchhcHH
Confidence            9998665555566788999999999999999999974

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=6.2e-29  Score=213.25  Aligned_cols=162  Identities=19%  Similarity=0.249  Sum_probs=133.5

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      ...||+|+||.||+|...     .++..||||+++.....    .....+.+|+.+++.+ +||||+++++++.+.+..+
T Consensus        15 ~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A           15 LDFLGEGQFATVYKARDK-----NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             EEEEEEETTEEEEEEECS-----SCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCE
T ss_pred             EeEEeecCCEEEEEEEEC-----CCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCceE
Confidence            348999999999999987     57789999999753221    1124688999999999 9999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+++ +|.+++.....                .+++..+..++.|++.||.|||++||+|||||            
T Consensus        89 lv~e~~~~-~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  151 (346)
T 1ua2_A           89 LVFDFMET-DLEVIIKDNSL----------------VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVL  151 (346)
T ss_dssp             EEEECCSE-EHHHHHTTCCS----------------SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             EEEEcCCC-CHHHHHHhcCc----------------CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCE
Confidence            99999986 99999876542                38899999999999999999999999999995            


Q ss_pred             -ccCCCcceeeeccC---CccccccccccccccccC-CCCccccee
Q psy12228        215 -FIGFDLCILVFFHD---STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                       ++|||+++......   ....+|+.|+|||++.+. .++.++||.
T Consensus       152 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  197 (346)
T 1ua2_A          152 KLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMW  197 (346)
T ss_dssp             EECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHH
T ss_pred             EEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhH
Confidence             78999998643322   456889999999999764 589999974

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=1.1e-28  Score=206.08  Aligned_cols=159  Identities=22%  Similarity=0.356  Sum_probs=137.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...     .++..||+|++.... .....+.+.+|+.+++++ +||||+++++++.+.+..++||||
T Consensus        29 ~lg~G~~g~V~~~~~~-----~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~  102 (287)
T 2wei_A           29 MLGKGSFGEVLKCKDR-----ITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGEL  102 (287)
T ss_dssp             EEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEcCCCCEEEEEEEEc-----CCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEEEEEEc
Confidence            8999999999999987     577899999996432 233456799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------c
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------F  215 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i  215 (258)
                      +++++|.+++.....                 +++..++.++.||+.||.|||++|++|||||                +
T Consensus       103 ~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL  165 (287)
T 2wei_A          103 YTGGELFDEIIKRKR-----------------FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKI  165 (287)
T ss_dssp             CCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             cCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEE
Confidence            999999999987655                 9999999999999999999999999999995                7


Q ss_pred             cCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||++.......  ....+|+.|+|||++.+ .++.++||.
T Consensus       166 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~  206 (287)
T 2wei_A          166 IDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVW  206 (287)
T ss_dssp             CSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHH
T ss_pred             eccCcceeecCCCccccccCcccccChHHhcC-CCCCchhhH
Confidence            8999887543332  34568899999999887 589999974

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.96  E-value=2.4e-29  Score=217.79  Aligned_cols=163  Identities=10%  Similarity=-0.050  Sum_probs=122.9

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhc-CCCccccee-------eeEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIG-QHINIINLL-------GVCT  140 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-~h~nIv~l~-------~~~~  140 (258)
                      ...||+|+||.||+|...     .++..||||+++....  ....+.+.+|+.+++.+. +||||++++       +++.
T Consensus        67 ~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           67 VEPLRVGDRSVVFLVRDV-----ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEECSSEEEEEEEET-----TTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeccCCCCEEEEEEEEC-----CCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            448999999999999987     5789999999986542  344567889988888774 499988755       4444


Q ss_pred             cC-----------------CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHH------HHHHHHHH
Q psy12228        141 QD-----------------GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL------ISFAYQVA  197 (258)
Q Consensus       141 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~i~~qi~  197 (258)
                      ..                 ..++|||||++ |+|.+++.....                .+.+..+      ..++.||+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----------------~~~~~~~~~~~vk~~i~~qi~  204 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----------------VYVFRGDEGILALHILTAQLI  204 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----------------SCCCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----------------ccchhhhhhhhhHHHHHHHHH
Confidence            33                 23799999999 799999987532                1444455      67779999


Q ss_pred             HHHHHHhhCCccccCcc-------------ccCCCcceeeeccCCcccccccccccccccc--CCCCccccee
Q psy12228        198 NGMHYLQSRKVGNDAVR-------------FIGFDLCILVFFHDSTLLKTTSTIASLILRN--QKVSVLLDLI  255 (258)
Q Consensus       198 ~gl~yLH~~~iiH~DlK-------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~Dv~  255 (258)
                      .||.|||++||+|||||             |+|||+++..........+|+.|+|||++.+  ..++.++||.
T Consensus       205 ~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~Diw  277 (371)
T 3q60_A          205 RLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAW  277 (371)
T ss_dssp             HHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHH
T ss_pred             HHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHH
Confidence            99999999999999996             7899999865444445677799999999987  7899999974

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.96  E-value=2e-28  Score=208.43  Aligned_cols=164  Identities=18%  Similarity=0.244  Sum_probs=123.4

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--------C
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--------D  142 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--------~  142 (258)
                      ..+||+|+||.||+|...     .++..||||++... .....+.+.+|+.++..+.+||||+++++++..        .
T Consensus        33 ~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           33 RRVLAEGGFAFVYEAQDV-----GSGREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             EEEEECCSSEEEEEEEET-----TTCCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             EEEEccCCceEEEEEEEC-----CCCcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            348999999999999987     57899999998654 455567899999999999559999999999942        3


Q ss_pred             CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--ccccCcc------
Q psy12228        143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK--VGNDAVR------  214 (258)
Q Consensus       143 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--iiH~DlK------  214 (258)
                      ...+++|||+. |+|.+++.....              ...+++..++.++.||+.||.|||+++  |+|||||      
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~  171 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMES--------------RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL  171 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHT--------------TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE
Confidence            35899999997 699999976332              134999999999999999999999999  9999995      


Q ss_pred             -------ccCCCcceeeeccC---------------Ccccccccccccccc---ccCCCCccccee
Q psy12228        215 -------FIGFDLCILVFFHD---------------STLLKTTSTIASLIL---RNQKVSVLLDLI  255 (258)
Q Consensus       215 -------i~dfgl~~~~~~~~---------------~~~~gt~~y~aPE~~---~~~~~s~~~Dv~  255 (258)
                             ++|||+++......               ....||+.|+|||++   .+..++.++||.
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~  237 (337)
T 3ll6_A          172 SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIW  237 (337)
T ss_dssp             CTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHH
T ss_pred             CCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHH
Confidence                   78999998643321               145689999999998   567889999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.96  E-value=1.3e-28  Score=211.52  Aligned_cols=161  Identities=19%  Similarity=0.316  Sum_probs=134.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--------C
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--------D  142 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--------~  142 (258)
                      ..||+|+||.||+|...     .++..||+|++.... .......+.+|+.+++.+ +||||+++++++.+        .
T Consensus        23 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           23 AKIGQGTFGEVFKARHR-----KTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             EECSSCSTTSEEEEEET-----TTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC--------
T ss_pred             EEEecCCCcEEEEEEEC-----CCCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccccccCC
Confidence            38999999999999987     578999999996543 222345688999999999 99999999999987        3


Q ss_pred             CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------
Q psy12228        143 GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------  214 (258)
Q Consensus       143 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------  214 (258)
                      +..++||||+++ +|.+.+.....                .+++..++.++.||+.||.|||++||+|||||        
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~~~----------------~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~  159 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNVLV----------------KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR  159 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCTTS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             ceEEEEEeccCC-CHHHHHhhccC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC
Confidence            468999999985 88888876542                39999999999999999999999999999995        


Q ss_pred             -----ccCCCcceeeecc-------CCcccccccccccccccc-CCCCccccee
Q psy12228        215 -----FIGFDLCILVFFH-------DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~-------~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                           ++|||+++.....       .....||+.|+|||++.+ ..++.++||.
T Consensus       160 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  213 (351)
T 3mi9_A          160 DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLW  213 (351)
T ss_dssp             TSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHH
T ss_pred             CCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHH
Confidence                 7899999865422       135678999999999976 4679999974

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.96  E-value=4.7e-28  Score=210.50  Aligned_cols=163  Identities=17%  Similarity=0.187  Sum_probs=139.9

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCC-----cccceeeeEEcCCc
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHI-----NIINLLGVCTQDGP  144 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~-----nIv~l~~~~~~~~~  144 (258)
                      ....||+|+||.||+|...     .++..||||+++.  .......+..|+.++..+..|+     +|+.+++++...+.
T Consensus        58 ~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           58 IDSLIGKGSFGQVVKAYDR-----VEQEWVAIKIIKN--KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             EEEEEEEETTEEEEEEEET-----TTTEEEEEEEECS--SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             EEEEEeecCCEEEEEEEEc-----CCCcEEEEEEEec--cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            3448999999999999987     5779999999975  3444567888999999885466     49999999999999


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--hCCccccCcc--------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQ--SRKVGNDAVR--------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH--~~~iiH~DlK--------  214 (258)
                      .++||||+++ +|.+++.....               ..+++..+..++.|++.||.|||  ..||+|||||        
T Consensus       131 ~~lv~e~~~~-~L~~~l~~~~~---------------~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~  194 (382)
T 2vx3_A          131 LCLVFEMLSY-NLYDLLRNTNF---------------RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN  194 (382)
T ss_dssp             EEEEEECCCC-BHHHHHHHTTT---------------SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS
T ss_pred             eEEEEecCCC-CHHHHHhhcCc---------------CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec
Confidence            9999999975 99999987642               23899999999999999999999  4799999995        


Q ss_pred             -------ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 -------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                             |+|||+++..........||+.|+|||++.+..++.++||.
T Consensus       195 ~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw  242 (382)
T 2vx3_A          195 PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMW  242 (382)
T ss_dssp             TTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHH
T ss_pred             CCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHH
Confidence                   78999998766555678999999999999999999999974

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=3e-28  Score=211.89  Aligned_cols=161  Identities=15%  Similarity=0.135  Sum_probs=134.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcC-------CCcccceeeeEE----
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ-------HINIINLLGVCT----  140 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-------h~nIv~l~~~~~----  140 (258)
                      ..||+|+||.||+|...     .+++.||||+++.  .....+.+.+|+.+++.+.+       |+||+++++++.    
T Consensus        43 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           43 RKLGWGHFSTVWLSWDI-----QGKKFVAMKVVKS--AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             EEEEECSSEEEEEEEET-----TTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             EEeeecCCeeEEEEEec-----CCCeEEEEEEEec--CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            38999999999999987     5789999999975  34556788999999999831       888999999997    


Q ss_pred             cCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-----
Q psy12228        141 QDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-----  214 (258)
Q Consensus       141 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-----  214 (258)
                      .....++||||+ +|+|.+++.....               ..+++..++.++.||+.||.|||++ ||+|||||     
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~---------------~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIl  179 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNY---------------QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENIL  179 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTT---------------SCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEE
T ss_pred             CCceEEEEEecc-CccHHHHHHhccc---------------CCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHee
Confidence            455799999999 5588777776532               2389999999999999999999998 99999986     


Q ss_pred             ---------------------------------------------------------ccCCCcceeeeccCCcccccccc
Q psy12228        215 ---------------------------------------------------------FIGFDLCILVFFHDSTLLKTTST  237 (258)
Q Consensus       215 ---------------------------------------------------------i~dfgl~~~~~~~~~~~~gt~~y  237 (258)
                                                                               ++|||++...........||+.|
T Consensus       180 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y  259 (397)
T 1wak_A          180 LSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQY  259 (397)
T ss_dssp             ECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGG
T ss_pred             EeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcc
Confidence                                                                     34777777655445667899999


Q ss_pred             ccccccccCCCCccccee
Q psy12228        238 IASLILRNQKVSVLLDLI  255 (258)
Q Consensus       238 ~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||++.+..++.++||.
T Consensus       260 ~aPE~~~~~~~~~~~Diw  277 (397)
T 1wak_A          260 RSLEVLIGSGYNTPADIW  277 (397)
T ss_dssp             CCHHHHHTSCCCTHHHHH
T ss_pred             cCChhhcCCCCCcHHHHH
Confidence            999999999999999974

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.96  E-value=2.4e-28  Score=203.96  Aligned_cols=164  Identities=16%  Similarity=0.192  Sum_probs=122.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHH-HHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEM-EMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .+++.||+|+++..........+..|. ..++.+ +||||+++++++.+++..++|||
T Consensus        13 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~~~~~~lv~e   86 (290)
T 3fme_A           13 MELGRGAYGVVEKMRHV-----PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV-DCPFTVTFYGALFREGDVWICME   86 (290)
T ss_dssp             EEEEECSSEEEEEEEET-----TTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSSEEEEEE
T ss_pred             HhcCCCCCeEEEEEEec-----CCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhC-CCCeEEEEeeeeeccCCEEEEEe
Confidence            38999999999999987     578999999998654444444444444 446667 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------cc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FI  216 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~  216 (258)
                      |+++ +|.+++.....             ....+++..++.++.|++.||.|||++ ||+|||||             ++
T Consensus        87 ~~~~-~l~~~l~~~~~-------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~  152 (290)
T 3fme_A           87 LMDT-SLDKFYKQVID-------------KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMC  152 (290)
T ss_dssp             CCSE-EHHHHHHHHHH-------------TTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBC
T ss_pred             hhcc-chHHHHHHHHh-------------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEe
Confidence            9985 99888875321             113499999999999999999999998 99999995             78


Q ss_pred             CCCcceeeeccC--Ccccccccccccccc----ccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLIL----RNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~----~~~~~s~~~Dv~  255 (258)
                      |||++.......  ....||+.|+|||++    .+..++.++||.
T Consensus       153 Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~  197 (290)
T 3fme_A          153 DFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIW  197 (290)
T ss_dssp             CC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHH
T ss_pred             ecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHH
Confidence            999997654332  345799999999996    566789999974

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.96  E-value=2.1e-28  Score=211.43  Aligned_cols=159  Identities=15%  Similarity=0.146  Sum_probs=138.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcC-----------CCcccceeeeEEc
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQ-----------HINIINLLGVCTQ  141 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-----------h~nIv~l~~~~~~  141 (258)
                      .||+|+||.||+|...     .++..||||++..  .....+.+.+|+.+++.+ .           |+||+++++++..
T Consensus        26 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           26 KLGWGHFSTVWLAKDM-----VNNTHVAMKIVRG--DKVYTEAAEDEIKLLQRV-NDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             EEEECSSEEEEEEEET-----TTTEEEEEEEECS--CHHHHHHHHHHHHHHHHH-HHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             eeeecCCeEEEEEEec-----CCCcEEEEEEecC--CccchhhhhHHHHHHHHh-hcccccchhccccchHHHHHHHhhc
Confidence            8999999999999987     5779999999975  344556788999999988 5           8999999999986


Q ss_pred             CC----cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc--
Q psy12228        142 DG----PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR--  214 (258)
Q Consensus       142 ~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK--  214 (258)
                      .+    ..+++||++ +++|.+++.....               ..+++..+..++.||+.||.|||++ ||+|||||  
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---------------~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~  161 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEH---------------RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE  161 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTT---------------SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGG
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhc---------------cCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChH
Confidence            54    689999999 7899999987543               3389999999999999999999998 99999985  


Q ss_pred             -----------------ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 -----------------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                       ++|||++...........||+.|+|||++.+..++.++||.
T Consensus       162 NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  219 (373)
T 1q8y_A          162 NVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIW  219 (373)
T ss_dssp             GEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHH
T ss_pred             HeEEeccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHH
Confidence                             67999998766555677899999999999999999999984

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=6.8e-29  Score=212.91  Aligned_cols=162  Identities=10%  Similarity=0.076  Sum_probs=129.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChH----------HHHHHHHHHHHHHHhcCCCcccceeeeEEc-
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDA----------EMMDLVSEMEMMKMIGQHINIINLLGVCTQ-  141 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-  141 (258)
                      .||+|+||.||+|....  ...++..||+|++.......          ....+.+|+..++.+ +||||+++++++.. 
T Consensus        44 ~lg~G~~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~~~~~~~  120 (345)
T 2v62_A           44 KIGSGGFGLIYLAFPTN--KPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFYGSGLTE  120 (345)
T ss_dssp             EC------CEEEEEESS--SCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEEEEEEEE
T ss_pred             eEeecCCeEEEEEEecC--CCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceeecccccc
Confidence            89999999999999862  11266889999997653221          113467888899999 99999999999987 


Q ss_pred             ---CCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----
Q psy12228        142 ---DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----  214 (258)
Q Consensus       142 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----  214 (258)
                         ....++||||+ +++|.+++.....                 +++..++.++.||+.||.|||+++|+|||||    
T Consensus       121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  182 (345)
T 2v62_A          121 FKGRSYRFMVMERL-GIDLQKISGQNGT-----------------FKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANL  182 (345)
T ss_dssp             SSSCEEEEEEEECE-EEEHHHHCBGGGB-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             cCCCcEEEEEEecc-CCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHE
Confidence               66899999999 8999999987654                 9999999999999999999999999999995    


Q ss_pred             -----------ccCCCcceeeeccC----------CccccccccccccccccCCCCccccee
Q psy12228        215 -----------FIGFDLCILVFFHD----------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -----------i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                 ++|||+++......          ....||+.|+|||++.+..++.++||.
T Consensus       183 ll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  244 (345)
T 2v62_A          183 LLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVE  244 (345)
T ss_dssp             EEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHH
T ss_pred             EEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHH
Confidence                       78999998653221          355799999999999999999999974

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.96  E-value=8.5e-29  Score=216.75  Aligned_cols=168  Identities=20%  Similarity=0.278  Sum_probs=122.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv~  149 (258)
                      .+||+|+||.||+|....   ..++..||||++......   ..+.+|+.+|+.+ +||||+++++++..  ...+++||
T Consensus        27 ~~lG~G~~g~Vy~~~~~~---~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKD---GKDDKDYALKQIEGTGIS---MSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             CCCC-----EEEEEEESS---SSCCCCEEEEECSSSSCC---HHHHHHHHHHHHC-CCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             cEeeecCCeEEEEEEEcc---CCCCeEEEEEEECCCCCC---HHHHHHHHHHHhc-CCCCeeeEeeEEecCCCCeEEEEE
Confidence            379999999999999752   135688999999754222   3578999999999 99999999999954  66799999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------  214 (258)
                      ||+.+ +|.+++.......        .......+++..++.|+.||+.||.|||+++|+|||||               
T Consensus       100 e~~~~-~l~~~~~~~~~~~--------~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  170 (405)
T 3rgf_A          100 DYAEH-DLWHIIKFHRASK--------ANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR  170 (405)
T ss_dssp             ECCSE-EHHHHHHHHHHHC---------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred             eCCCC-CHHHHHHHhcccc--------ccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc
Confidence            99975 9998887543100        00011248999999999999999999999999999995               


Q ss_pred             --ccCCCcceeeecc------CCccccccccccccccccC-CCCccccee
Q psy12228        215 --FIGFDLCILVFFH------DSTLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                        |+|||+++.....      .....||+.|+|||++.+. .++.++||.
T Consensus       171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  220 (405)
T 3rgf_A          171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW  220 (405)
T ss_dssp             EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHH
T ss_pred             EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhH
Confidence              6899999865432      2457889999999999874 589999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=1.5e-28  Score=213.75  Aligned_cols=159  Identities=18%  Similarity=0.234  Sum_probs=129.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC---------
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD---------  142 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~---------  142 (258)
                      ..||+|+||.||+|...     .++..||||++......     ..+|+.+++.+ +||||+++++++...         
T Consensus        13 ~~lG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~~~~-----~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~   81 (383)
T 3eb0_A           13 KTLGTGSFGIVCEVFDI-----ESGKRFALKKVLQDPRY-----KNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPKPPQ   81 (383)
T ss_dssp             EEEECC-CEEEEEEEET-----TTCCEEEEEEEECCTTS-----CCHHHHHHTTC-CCTTBCCEEEEEEEC---------
T ss_pred             EEEEeccCEEEEEEEEC-----CCCCEEEEEEEecCcch-----HHHHHHHHHHc-CCCCccchhheeeecCcccccccc
Confidence            38999999999999987     67899999999754222     23799999999 999999999998543         


Q ss_pred             -----------------------------CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q psy12228        143 -----------------------------GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA  193 (258)
Q Consensus       143 -----------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  193 (258)
                                                   ...++||||+++ +|.+.+.....             ....+++..+..++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~-------------~~~~l~~~~~~~i~  147 (383)
T 3eb0_A           82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIR-------------SGRSIPMNLISIYI  147 (383)
T ss_dssp             ----------------------------CCEEEEEECCCSE-EHHHHHHHHHH-------------TTCCCCHHHHHHHH
T ss_pred             cccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHh-------------cCCCCCHHHHHHHH
Confidence                                         248899999985 88888775321             11349999999999


Q ss_pred             HHHHHHHHHHhhCCccccCcc--------------ccCCCcceeeeccC--CccccccccccccccccC-CCCccccee
Q psy12228        194 YQVANGMHYLQSRKVGNDAVR--------------FIGFDLCILVFFHD--STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       194 ~qi~~gl~yLH~~~iiH~DlK--------------i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      .||+.||.|||++||+|||||              ++|||+++......  ....+|+.|+|||++.+. .++.++||.
T Consensus       148 ~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  226 (383)
T 3eb0_A          148 YQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLW  226 (383)
T ss_dssp             HHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHH
T ss_pred             HHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhh
Confidence            999999999999999999995              78999998654433  467889999999998875 489999974

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=1.9e-29  Score=211.78  Aligned_cols=168  Identities=18%  Similarity=0.253  Sum_probs=119.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||||++.........+.+.+|+.+++.+ +||||+++++++...+..++||||+
T Consensus        22 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   95 (303)
T 2vwi_A           22 VIGSGATAVVQAAYCA-----PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLL   95 (303)
T ss_dssp             ECC---CCCEEEEEC---------CEEEEECCC----------------CCCCC-CCTTBCCEEEEEESSSCEEEEEECC
T ss_pred             eeccccceEEEEEEEC-----CCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEEEehhc
Confidence            8999999999999986     567899999997654445567789999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.......         ......+++..++.++.||+.||.|||++||+|||||             ++|||
T Consensus        96 ~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg  166 (303)
T 2vwi_A           96 SGGSVLDIIKHIVAKG---------EHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFG  166 (303)
T ss_dssp             TTCBHHHHHHHHHHTT---------TTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred             cCCchHHHHHHHhhcc---------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEecc
Confidence            9999999997531100         0012348999999999999999999999999999995             78999


Q ss_pred             cceeeecc--------CCcccccccccccccccc-CCCCccccee
Q psy12228        220 LCILVFFH--------DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      ++......        .....||+.|+|||++.+ ..++.++||.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  211 (303)
T 2vwi_A          167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW  211 (303)
T ss_dssp             HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHH
T ss_pred             chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHH
Confidence            88654322        134578999999999976 5789999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.96  E-value=1.5e-28  Score=210.11  Aligned_cols=156  Identities=18%  Similarity=0.205  Sum_probs=112.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHH-HHHhcCCCcccceeeeEEc----CCcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM-MKMIGQHINIINLLGVCTQ----DGPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~~h~nIv~l~~~~~~----~~~~~l  147 (258)
                      +||+|+||.||+|...     .+++.||||++...  ..    ..+|+.. ++.+ +||||+++++++..    ....++
T Consensus        36 ~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~--~~----~~~e~~~~~~~~-~h~~i~~~~~~~~~~~~~~~~~~l  103 (336)
T 3fhr_A           36 VLGLGVNGKVLECFHR-----RTGQKCALKLLYDS--PK----ARQEVDHHWQAS-GGPHIVCILDVYENMHHGKRCLLI  103 (336)
T ss_dssp             EEEEETTEEEEEEEET-----TTCCEEEEEEEESS--HH----HHHHHHHHHHHT-TSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             eeeeCCCeEEEEEEEC-----CCCCEEEEEEecCc--HH----HHHHHHHHHHhc-CCCChHHHHHHHhhccCCCceEEE
Confidence            6999999999999987     57899999999753  22    2234433 4455 99999999999976    345899


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      ||||+++|+|.+++.....               ..+++..++.++.||+.||.|||++||+|||||             
T Consensus       104 v~e~~~gg~L~~~l~~~~~---------------~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~  168 (336)
T 3fhr_A          104 IMECMEGGELFSRIQERGD---------------QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDA  168 (336)
T ss_dssp             EEECCTTEEHHHHHHTC-C---------------CCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTC
T ss_pred             EEeccCCCCHHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCc
Confidence            9999999999999987643               349999999999999999999999999999985             


Q ss_pred             ---ccCCCcceeeeccC-CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++...... ....+|+.|+|||++.+..++.++||.
T Consensus       169 ~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  213 (336)
T 3fhr_A          169 VLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW  213 (336)
T ss_dssp             CEEECCCTTCEEC----------------------CHHHHHHHHH
T ss_pred             eEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHH
Confidence               78999998654332 467889999999999998999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.96  E-value=2.3e-28  Score=210.09  Aligned_cols=159  Identities=21%  Similarity=0.281  Sum_probs=131.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc-----
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP-----  144 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~-----  144 (258)
                      ...||+|+||.||+|...     .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++...+.     
T Consensus        29 ~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           29 PTHVGSGAYGSVCSAIDK-----RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             EEEEEECSSEEEEEEEET-----TTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCC
T ss_pred             eeeEecCCCeEEEEEEEC-----CCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEecccccccce
Confidence            348999999999999987     578999999997543 344567899999999999 99999999999987654     


Q ss_pred             -EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        145 -LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       145 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                       .++||||+. |+|.+++..                   .+++..+..++.||+.||.|||++||+|||||         
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~-------------------~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~  162 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGL-------------------KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED  162 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTS-------------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTT
T ss_pred             eEEEEecccc-CCHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCC
Confidence             499999998 588877632                   28999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeeccCCcccccccccccccccc-CCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHDSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                          ++|||+++..........+|+.|+|||++.+ ..++.++||.
T Consensus       163 ~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~  208 (353)
T 3coi_A          163 CELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIW  208 (353)
T ss_dssp             CCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHH
T ss_pred             CcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHH
Confidence                7899999876555566789999999999987 6789999974

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.3e-28  Score=211.72  Aligned_cols=161  Identities=14%  Similarity=0.153  Sum_probs=130.7

Q ss_pred             eeeeecCceEEEEEEEccccc---CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccc--------------
Q psy12228         72 YVKIKCAFGKVICAEANGILK---QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIIN--------------  134 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~--------------  134 (258)
                      ..||+|+||.||+|.......   ...+..||+|++...      +.+.+|+.+++.+ +||||++              
T Consensus        48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~i~  120 (352)
T 2jii_A           48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRA-AKPLQVNKWKKLYSTPLLAIP  120 (352)
T ss_dssp             EEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHH-CCHHHHHHHHHHTTCTTCSCC
T ss_pred             EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHh-cccchhhhhhhhccCCccCcc
Confidence            389999999999999872100   003689999999753      3578999999999 9999998              


Q ss_pred             -eeeeEEc-CCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy12228        135 -LLGVCTQ-DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDA  212 (258)
Q Consensus       135 -l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~D  212 (258)
                       +++++.. ++..++||||+ +|+|.+++.....               ..+++..++.++.||+.||.|||++||+|||
T Consensus       121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~D  184 (352)
T 2jii_A          121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK---------------HVLSERSVLQVACRLLDALEFLHENEYVHGN  184 (352)
T ss_dssp             CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG---------------GCCCHHHHHHHHHHHHHHHHHHHHTTCBCSC
T ss_pred             chhhccccCCcEEEEEecCC-CcCHHHHHHhCCc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence             5677765 67899999999 8999999987521               2399999999999999999999999999999


Q ss_pred             cc---------------ccCCCcceeeeccC----------CccccccccccccccccCCCCccccee
Q psy12228        213 VR---------------FIGFDLCILVFFHD----------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       213 lK---------------i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||               ++|||+++......          ....||+.|+|||++.+..++.++||.
T Consensus       185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  252 (352)
T 2jii_A          185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQ  252 (352)
T ss_dssp             CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             CCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHH
Confidence            95               78999997643321          345899999999999999999999974

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.95  E-value=1e-27  Score=205.36  Aligned_cols=159  Identities=15%  Similarity=0.205  Sum_probs=136.5

Q ss_pred             eeeecCceEEEEEEEcccccCCce-EEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCc------ccceeeeEEcCCcE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGII-TTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHIN------IINLLGVCTQDGPL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~n------Iv~l~~~~~~~~~~  145 (258)
                      .||+|+||.||+|...     .++ ..||+|+++.  .....+.+.+|+.+++.+ +|++      ++.+++++...+..
T Consensus        26 ~lg~G~~g~V~~~~~~-----~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           26 NLGEGTFGKVVECLDH-----ARGKSQVALKIIRN--VGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             EEEEETTEEEEEEEET-----TTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             EeeccCCeEEEEEEec-----CCCceEEEEEEEcc--cccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeeeCCeE
Confidence            8999999999999986     344 7899999975  345567788999999999 6665      89999999999999


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++||||+ +++|.+++.....               ..+++..++.++.||+.||.|||++||+|||||           
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~---------------~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~  161 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNF---------------QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF  161 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTT---------------CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCE
T ss_pred             EEEEecc-CCChHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccc
Confidence            9999999 5688888877542               248999999999999999999999999999985           


Q ss_pred             ---------------------ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 ---------------------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---------------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                           ++|||+++..........||+.|+|||++.+..++.++||.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  223 (355)
T 2eu9_A          162 ETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVW  223 (355)
T ss_dssp             EEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHH
T ss_pred             cccccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchH
Confidence                                 46899988655555677899999999999999999999974

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.95  E-value=7.3e-28  Score=201.46  Aligned_cols=159  Identities=18%  Similarity=0.120  Sum_probs=131.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeE-EcCCcEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVC-TQDGPLYVIV  149 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~-~~~~~~~lv~  149 (258)
                      ...||+|+||.||+|...     .++..||||++.....   ...+.+|+.+++.+ +|++++..++.+ ...+..++||
T Consensus        14 ~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A           14 GRKIGSGSFGDIYLGTDI-----AAGEEVAIKLECVKTK---HPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             EEEEEECSSSEEEEEEET-----TTTEEEEEEEEEC------CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEE
T ss_pred             eeeecCCCCeEEEEEEEc-----CCCceEEEEeeccccc---chHHHHHHHHHHHh-cCCCCCCeeeeecCCCCceEEEE
Confidence            338999999999999987     5779999998764322   23478899999999 777766666555 5667789999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------  214 (258)
                      ||+ +|+|.+++.....                .+++..++.++.||+.||.|||+++|+|||||               
T Consensus        85 e~~-~~~L~~~~~~~~~----------------~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~  147 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSR----------------KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV  147 (296)
T ss_dssp             ECC-CCBHHHHHHHTTS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCE
T ss_pred             Ecc-CCCHHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeE
Confidence            999 8899999986442                39999999999999999999999999999995               


Q ss_pred             -ccCCCcceeeeccC----------CccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFHD----------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||+++......          ....||+.|+|||++.+..++.++||.
T Consensus       148 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  199 (296)
T 4hgt_A          148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE  199 (296)
T ss_dssp             EECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHH
T ss_pred             EEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHH
Confidence             68999998654432          356889999999999999999999974

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.95  E-value=4.6e-28  Score=204.71  Aligned_cols=158  Identities=21%  Similarity=0.280  Sum_probs=128.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEE-----------
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCT-----------  140 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~-----------  140 (258)
                      ..||+|+||.||+|...     .+++.||+|++... .....+.+.+|+.+++.+ +||||+++++++.           
T Consensus        17 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           17 KPLGCGGNGLVFSAVDN-----DCDKRVAIKKIVLT-DPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             EECC-----CEEEEEET-----TTTEEEEEEEEECC-SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBCCC---
T ss_pred             EEeccCCCeEEEEEEEC-----CCCeEEEEEEEecC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEeccccccccccccc
Confidence            38999999999999987     57899999999764 556667899999999999 9999999999874           


Q ss_pred             ---cCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---
Q psy12228        141 ---QDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---  214 (258)
Q Consensus       141 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---  214 (258)
                         +.+..++||||++ |+|.+++... .                 +++..++.++.|++.||.|||++||+|||||   
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  150 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQG-P-----------------LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN  150 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTTC-C-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGG
T ss_pred             cccccCceeEEeeccC-CCHHHHhhcC-C-----------------ccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence               3357899999998 5999998652 2                 8999999999999999999999999999995   


Q ss_pred             -----------ccCCCcceeeecc------CCcccccccccccccccc-CCCCccccee
Q psy12228        215 -----------FIGFDLCILVFFH------DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -----------i~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                                 ++|||+++.....      .....+|+.|+|||++.+ ..++.++||.
T Consensus       151 il~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  209 (320)
T 2i6l_A          151 LFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMW  209 (320)
T ss_dssp             EEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHH
T ss_pred             EEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhH
Confidence                       7899999864321      234567899999999865 6789999974

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=7.2e-28  Score=205.19  Aligned_cols=155  Identities=20%  Similarity=0.323  Sum_probs=125.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHh-cCCCcccceeeeEEcC----CcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMI-GQHINIINLLGVCTQD----GPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~~h~nIv~l~~~~~~~----~~~~  146 (258)
                      ..||+|+||.||+|...       +..||||++...    ....+..|.+++..+ .+||||+++++++...    ...+
T Consensus        43 ~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  111 (337)
T 3mdy_A           43 KQIGKGRYGEVWMGKWR-------GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY  111 (337)
T ss_dssp             EEEEEETTEEEEEEEET-------TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred             eEeecCCCeEEEEEEEC-------CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence            38999999999999875       488999999642    223344555555443 1899999999999877    6799


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC--------CccccCcc----
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR--------KVGNDAVR----  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~--------~iiH~DlK----  214 (258)
                      +||||+++|+|.++++...                  +++..++.++.|++.||.|||++        +|+|||||    
T Consensus       112 lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Ni  173 (337)
T 3mdy_A          112 LITDYHENGSLYDYLKSTT------------------LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI  173 (337)
T ss_dssp             EEECCCTTCBHHHHHHHCC------------------BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGE
T ss_pred             EEEeccCCCcHHHHhhccC------------------CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHE
Confidence            9999999999999997643                  89999999999999999999999        99999995    


Q ss_pred             ---------ccCCCcceeeeccC-------CccccccccccccccccCCCCcc------ccee
Q psy12228        215 ---------FIGFDLCILVFFHD-------STLLKTTSTIASLILRNQKVSVL------LDLI  255 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~s~~------~Dv~  255 (258)
                               ++|||+++......       ....||+.|+|||++.+..++..      +||.
T Consensus       174 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw  236 (337)
T 3mdy_A          174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMY  236 (337)
T ss_dssp             EECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHH
T ss_pred             EECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchH
Confidence                     78999997653332       25689999999999988777665      8873

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.95  E-value=6.7e-28  Score=203.76  Aligned_cols=161  Identities=14%  Similarity=0.187  Sum_probs=132.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcC-CCcccceeeeEEcCCcEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQ-HINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~-h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ...||+|+||.||++...      ++..||||++.... .....+.+.+|+.++..+.+ |+||+++++++.+++..++|
T Consensus        33 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  106 (313)
T 3cek_A           33 LKQIGSGGSSKVFQVLNE------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  106 (313)
T ss_dssp             EEEEECCSSEEEEEEECT------TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEecCCCCEEEEEEEcC------CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence            348999999999999875      46889999996532 45566789999999999943 69999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------cc
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------FI  216 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------i~  216 (258)
                      || +.+++|.+++.....                 +++..++.++.|++.||.|||+++|+|||||            ++
T Consensus       107 ~e-~~~~~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~  168 (313)
T 3cek_A          107 ME-CGNIDLNSWLKKKKS-----------------IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI  168 (313)
T ss_dssp             EC-CCSEEHHHHHHHCSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEEC
T ss_pred             Ee-cCCCcHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEe
Confidence            99 567799999987654                 8999999999999999999999999999995            78


Q ss_pred             CCCcceeeeccC-----Ccccccccccccccccc-----------CCCCccccee
Q psy12228        217 GFDLCILVFFHD-----STLLKTTSTIASLILRN-----------QKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~s~~~Dv~  255 (258)
                      |||++.......     ....||+.|+|||++.+           ..++.++||.
T Consensus       169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~  223 (313)
T 3cek_A          169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW  223 (313)
T ss_dssp             CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHH
T ss_pred             eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHH
Confidence            999998654332     35578999999999976           4788899974

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.95  E-value=1.9e-27  Score=198.98  Aligned_cols=158  Identities=18%  Similarity=0.126  Sum_probs=132.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeE-EcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVC-TQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~-~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .++..||||++......   +.+.+|+.+++.+ +|++++..+..+ ...+..++|||
T Consensus        15 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A           15 RKIGSGSFGDIYLGTDI-----AAGEEVAIKLECVKTKH---PQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             EEEEEETTEEEEEEEET-----TTTEEEEEEEEESCSSC---CHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             EEEccCCCeEEEEEEEc-----CCCcEEEEEEecCCcch---hHHHHHHHHHHHh-hcCCCCCccccccCCCCceEEEEE
Confidence            38999999999999986     57899999998754322   3588999999999 777766655555 55667899999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+ +++|.+++.....                .+++..++.++.|++.||.|||+++|+|||||                
T Consensus        86 ~~-~~~L~~~~~~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~k  148 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSR----------------KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVY  148 (296)
T ss_dssp             CC-CCBHHHHHHHTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEE
T ss_pred             ec-CCCHHHHHHhhcc----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEE
Confidence            99 8899999985432                39999999999999999999999999999995                


Q ss_pred             ccCCCcceeeeccC----------CccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFHD----------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||+++......          ....||+.|+|||++.+..++.++||.
T Consensus       149 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  199 (296)
T 3uzp_A          149 IIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE  199 (296)
T ss_dssp             ECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             EeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhH
Confidence            68999998654432          356899999999999999999999974

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.95  E-value=3.6e-28  Score=209.39  Aligned_cols=161  Identities=17%  Similarity=0.255  Sum_probs=126.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC----------hHHHHHHHHHHHHHHHhcCCCcccceeeeEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS----------DAEMMDLVSEMEMMKMIGQHINIINLLGVCT  140 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~  140 (258)
                      ...||+|+||.||+|...      .+..||||++.....          ....+.+.+|+.+++.+ +||||+++++++.
T Consensus        27 ~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~   99 (362)
T 3pg1_A           27 QRFISSGSYGAVCAGVDS------EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFV   99 (362)
T ss_dssp             EEEEEEETTEEEEEEECT------TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEE
T ss_pred             eEEeccCCCEEEEEEECC------CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeeeEE
Confidence            348999999999999875      478999999954321          22347799999999999 9999999999985


Q ss_pred             cC-----CcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-
Q psy12228        141 QD-----GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-  214 (258)
Q Consensus       141 ~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-  214 (258)
                      ..     ...++||||++ |+|.+++.....                .+++..+..++.||+.||.|||++||+||||| 
T Consensus       100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp  162 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQRI----------------VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHP  162 (362)
T ss_dssp             ECCTTTCCEEEEEEECCS-EEHHHHHHCTTS----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             eccCCCcceEEEEEccCC-CCHHHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCCh
Confidence            42     35899999998 599999886542                38999999999999999999999999999995 


Q ss_pred             ------------ccCCCcceeeecc--CCcccccccccccccccc-CCCCccccee
Q psy12228        215 ------------FIGFDLCILVFFH--DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ------------i~dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                                  ++|||+++.....  .....+|+.|+|||++.+ ..++.++||.
T Consensus       163 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  218 (362)
T 3pg1_A          163 GNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMW  218 (362)
T ss_dssp             GGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHH
T ss_pred             HHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHH
Confidence                        7899999754333  245688999999999987 6789999974

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.95  E-value=1e-27  Score=204.71  Aligned_cols=153  Identities=21%  Similarity=0.322  Sum_probs=130.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHH--hcCCCcccceeeeEEcCC----cEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKM--IGQHINIINLLGVCTQDG----PLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~~h~nIv~l~~~~~~~~----~~~  146 (258)
                      .||+|+||.||+|...       +..||||+++..    ....+.+|++++..  + +||||+++++++....    ..+
T Consensus        49 ~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~----~~~~~~~e~~~~~~~~l-~h~ni~~~~~~~~~~~~~~~~~~  116 (342)
T 1b6c_B           49 SIGKGRFGEVWRGKWR-------GEEVAVKIFSSR----EERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLW  116 (342)
T ss_dssp             EEEEETTEEEEEEEET-------TEEEEEEEECGG----GHHHHHHHHHHHHHSCC-CCTTBCCEEEEEECCCSSCCCEE
T ss_pred             eecCCCCcEEEEEEEc-------CccEEEEEeCch----hHHHHHHHHHHHHHhhc-CCCcEEEEEeeecccCCccceeE
Confidence            8999999999999874       488999999642    34568889999988  6 8999999999998776    799


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCccccCcc----
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQ--------SRKVGNDAVR----  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH--------~~~iiH~DlK----  214 (258)
                      +||||+++|+|.+++....                  +++..++.++.|++.||.|||        +++|+|||||    
T Consensus       117 lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NI  178 (342)
T 1b6c_B          117 LVSDYHEHGSLFDYLNRYT------------------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI  178 (342)
T ss_dssp             EEECCCTTCBHHHHHHHCC------------------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGE
T ss_pred             EEEeecCCCcHHHHHhccC------------------ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHE
Confidence            9999999999999997642                  899999999999999999999        8999999995    


Q ss_pred             ---------ccCCCcceeeeccC-------CccccccccccccccccC------CCCccccee
Q psy12228        215 ---------FIGFDLCILVFFHD-------STLLKTTSTIASLILRNQ------KVSVLLDLI  255 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~s~~~Dv~  255 (258)
                               ++|||++.......       ....||+.|+|||++.+.      .++.++||.
T Consensus       179 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~  241 (342)
T 1b6c_B          179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  241 (342)
T ss_dssp             EECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHH
T ss_pred             EECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHH
Confidence                     78999998765432       355899999999999875      334678874

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=9.1e-28  Score=214.47  Aligned_cols=159  Identities=16%  Similarity=0.125  Sum_probs=134.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||+|...     .++..||||+++.....   ..+.+|+.+++.+.+|++|..+..++...+..+|||||
T Consensus        13 ~~LG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~   84 (483)
T 3sv0_A           13 RKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL   84 (483)
T ss_dssp             CCCEECSSCEEEEEEET-----TTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             EEEeeCCCEEEEEEEEC-----CCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence            38999999999999987     57799999998754332   24789999999994456777777777778889999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------c
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------F  215 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i  215 (258)
                      + +++|.+++.....                .+++..++.|+.||+.||.|||+++|+|||||                |
T Consensus        85 ~-g~sL~~ll~~~~~----------------~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL  147 (483)
T 3sv0_A           85 L-GPSLEDLFNFCSR----------------KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYI  147 (483)
T ss_dssp             C-CCBHHHHHHHTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEE
T ss_pred             C-CCCHHHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEE
Confidence            9 8899999986442                39999999999999999999999999999995                7


Q ss_pred             cCCCcceeeeccC----------CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD----------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......          ....||+.|+|||++.+..++.++||.
T Consensus       148 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvw  197 (483)
T 3sv0_A          148 IDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLE  197 (483)
T ss_dssp             CCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             EeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHH
Confidence            8999998754432          267899999999999999999999974

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.95  E-value=8.7e-28  Score=204.25  Aligned_cols=164  Identities=15%  Similarity=0.180  Sum_probs=118.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHH-HHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEME-MMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...     .++..||||+++..........+..|+. +++.+ +||||+++++++.+++..++||||
T Consensus        29 ~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~-~h~niv~~~~~~~~~~~~~lv~e~  102 (327)
T 3aln_A           29 EIGRGAYGSVNKMVHK-----PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS-DCPYIVQFYGALFREGDCWICMEL  102 (327)
T ss_dssp             EEEECSSEEEEEEEET-----TTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSC-CCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eeccCCCEEEEEEEEc-----CCCCEEEEEEeecccCchHHHHHHHHHHHHHHcC-CCCcEeeeeeEEEeCCceEEEEee
Confidence            7999999999999987     5789999999987655566667777777 55556 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~d  217 (258)
                      +++ +|.+++......            ....+++..+..++.|++.||.|||++ ||+|||||             ++|
T Consensus       103 ~~~-~l~~~~~~~~~~------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~D  169 (327)
T 3aln_A          103 MST-SFDKFYKYVYSV------------LDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCD  169 (327)
T ss_dssp             CSE-EHHHHHHHHHHT------------TCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECC
T ss_pred             cCC-ChHHHHHHHHhh------------hcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEcc
Confidence            986 888888742110            013489999999999999999999999 99999995             789


Q ss_pred             CCcceeeeccC--Ccccccccccccccc----ccCCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLIL----RNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~----~~~~~s~~~Dv~  255 (258)
                      ||+++......  ....||+.|+|||++    .+..++.++||.
T Consensus       170 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~  213 (327)
T 3aln_A          170 FGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVW  213 (327)
T ss_dssp             CSSSCC------------------------------CCSHHHHH
T ss_pred             CCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHH
Confidence            99997654332  345799999999999    566789999974

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.95  E-value=4e-28  Score=202.66  Aligned_cols=163  Identities=29%  Similarity=0.331  Sum_probs=127.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|.+..  ..+....||+|+++...  .....+.+.+|+.+++.+ +||||+++++++.++. .++|||
T Consensus        25 ~lg~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~v~e  100 (291)
T 1u46_A           25 KLGDGSFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-MKMVTE  100 (291)
T ss_dssp             ECC----CCCEEEEEEC--TTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CEEEEE
T ss_pred             eecCCCceeEEEEEecc--CCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-ceeeEe
Confidence            89999999999998752  11244679999997542  234567899999999999 9999999999998764 889999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..+..++.|++.||.|||+++|+|||||             ++|
T Consensus       101 ~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~D  164 (291)
T 1u46_A          101 LAPLGSLLDRLRKHQG----------------HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD  164 (291)
T ss_dssp             CCTTCBHHHHHHHHGG----------------GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECC
T ss_pred             cccCCCHHHHHHhccC----------------CcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcc
Confidence            9999999999987542                28999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||++.......      ....+|+.|+|||++.+..++.++||.
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  208 (291)
T 1u46_A          165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW  208 (291)
T ss_dssp             CTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHH
T ss_pred             ccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHH
Confidence            99998654332      245677889999999998999999974

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.95  E-value=7.7e-28  Score=204.20  Aligned_cols=164  Identities=20%  Similarity=0.311  Sum_probs=132.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhc--CCCcccceeeeEE-----cCC
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIG--QHINIINLLGVCT-----QDG  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--~h~nIv~l~~~~~-----~~~  143 (258)
                      ..||+|+||.||+|....    .++..||+|+++.... ......+.+|+.+++.+.  +||||+++++++.     ...
T Consensus        17 ~~lg~G~~g~V~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   92 (326)
T 1blx_A           17 AEIGEGAYGKVFKARDLK----NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   92 (326)
T ss_dssp             EEEEEETTEEEEEEEETT----TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             eeecccccEEEEEEEecC----CCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence            389999999999999842    3568999999964321 111234567777666553  7999999999987     455


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      ..++||||++ |+|.+++.....               ..+++..++.++.||+.||.|||++||+|||||         
T Consensus        93 ~~~lv~e~~~-~~L~~~l~~~~~---------------~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~  156 (326)
T 1blx_A           93 KLTLVFEHVD-QDLTTYLDKVPE---------------PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS  156 (326)
T ss_dssp             EEEEEEECCS-CBHHHHHHHSCT---------------TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             eEEEEEecCC-CCHHHHHHhccc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCC
Confidence            7899999998 599999987543               338999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeecc--CCccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFH--DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||+++.....  .....||+.|+|||++.+..++.++||.
T Consensus       157 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  203 (326)
T 1blx_A          157 GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLW  203 (326)
T ss_dssp             CCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHH
T ss_pred             CCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHH
Confidence                7899999865433  2456889999999999999999999974

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=1.1e-28  Score=226.24  Aligned_cols=163  Identities=18%  Similarity=0.247  Sum_probs=142.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc------CCcEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ------DGPLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~------~~~~~  146 (258)
                      .||+|+||.||+|...     .++..||||+++........+.+.+|+.+++.+ +||||+++++++..      .+..+
T Consensus        21 ~LG~G~fG~Vyla~~~-----~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~~~~   94 (676)
T 3qa8_A           21 RLGTGGFGYVLRWIHQ-----DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPL   94 (676)
T ss_dssp             CCCBCSSSBCCCCCCT-----TTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTSSCC
T ss_pred             EEeeCCCeEEEEEEEC-----CCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCCeEE
Confidence            8999999999999886     577899999998766777778899999999999 99999999998765      56789


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +||||+++|+|.+++.....              ...+++..++.++.|++.||.|||++||+|||||            
T Consensus        95 LVmEy~~ggsL~~~L~~~~~--------------~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~  160 (676)
T 3qa8_A           95 LAMEYCEGGDLRKYLNQFEN--------------CCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQR  160 (676)
T ss_dssp             CEEECCSSCBHHHHHHSSSC--------------TTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSS
T ss_pred             EEEEeCCCCCHHHHHHhccc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCc
Confidence            99999999999999987543              1348899999999999999999999999999995            


Q ss_pred             ----ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||++.......  ....||+.|+|||++.+..++.++||.
T Consensus       161 ~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIw  207 (676)
T 3qa8_A          161 LIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYW  207 (676)
T ss_dssp             CEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHH
T ss_pred             eeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHH
Confidence                78999998654332  456899999999999999999999974

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.95  E-value=2.7e-28  Score=207.08  Aligned_cols=161  Identities=17%  Similarity=0.163  Sum_probs=136.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-----HHHHHHHHHHHHHHHhc-CCCcccceeeeEEcCCcEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-----AEMMDLVSEMEMMKMIG-QHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~-~h~nIv~l~~~~~~~~~~~  146 (258)
                      .||+|+||.||+|...     .++..||||+++.....     .....+.+|+.+++.+. .|+||+++++++...+..+
T Consensus        50 ~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~  124 (320)
T 3a99_A           50 LLGSGGFGSVYSGIRV-----SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV  124 (320)
T ss_dssp             ECSSSSSCEEEEEEET-----TTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred             EEeeCCCeEEEEEEEC-----CCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEE
Confidence            8999999999999987     57799999999653211     12245778999999994 2699999999999999999


Q ss_pred             EEEEeCCC-CCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        147 VIVEFAPH-GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       147 lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +|||++.+ ++|.+++.....                 +++..++.++.||+.||.|||+++|+|||||           
T Consensus       125 lv~e~~~~~~~L~~~l~~~~~-----------------l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~  187 (320)
T 3a99_A          125 LILERPEPVQDLFDFITERGA-----------------LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG  187 (320)
T ss_dssp             EEEECCSSEEEHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT
T ss_pred             EEEEcCCCCccHHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCC
Confidence            99999976 899999988665                 9999999999999999999999999999995           


Q ss_pred             ---ccCCCcceeeeccC-CccccccccccccccccCCC-Cccccee
Q psy12228        215 ---FIGFDLCILVFFHD-STLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                         ++|||+++...... ....||+.|+|||++.+..+ +.++||.
T Consensus       188 ~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~  233 (320)
T 3a99_A          188 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVW  233 (320)
T ss_dssp             EEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHH
T ss_pred             CEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHH
Confidence               78999998654433 45679999999999988776 7888973

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=1.1e-28  Score=224.38  Aligned_cols=155  Identities=12%  Similarity=0.056  Sum_probs=113.9

Q ss_pred             eeecCceEEEEEEEcccccCCceEEEEEEEecCCC---------ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc
Q psy12228         74 KIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---------SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP  144 (258)
Q Consensus        74 ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~  144 (258)
                      .+.|+.|.+..++..     ..+..+|+|++....         .+...++|.+|+++|++++.|+||+++++++.+++.
T Consensus       242 ~~~~~~~~h~~~rr~-----~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~  316 (569)
T 4azs_A          242 PYAGAGLAHKRSRRY-----FFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQS  316 (569)
T ss_dssp             -C--------CCEEE-----EECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSE
T ss_pred             cccCCcccccccccc-----cccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCE
Confidence            456667666655544     467889999996542         123346799999999999889999999999999999


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      .||||||++||+|.++|...+.                 ++..   .|+.||+.||+|||++||||||||          
T Consensus       317 ~yLVMEyv~G~~L~d~i~~~~~-----------------l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg  376 (569)
T 4azs_A          317 GWLVMEKLPGRLLSDMLAAGEE-----------------IDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQ  376 (569)
T ss_dssp             EEEEEECCCSEEHHHHHHTTCC-----------------CCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTS
T ss_pred             EEEEEecCCCCcHHHHHHhCCC-----------------CCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCC
Confidence            9999999999999999988665                 6654   478999999999999999999996          


Q ss_pred             ---ccCCCcceeeecc---CCccccccccccccccccCCCCcccce
Q psy12228        215 ---FIGFDLCILVFFH---DSTLLKTTSTIASLILRNQKVSVLLDL  254 (258)
Q Consensus       215 ---i~dfgl~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~~Dv  254 (258)
                         |+|||+|+.....   ..+.+||+.|||||++.+ .+..++|+
T Consensus       377 ~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~  421 (569)
T 4azs_A          377 HARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFW  421 (569)
T ss_dssp             CEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC-----------
T ss_pred             CEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCcccc
Confidence               8899999865433   246789999999999987 45566664

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.95  E-value=1.3e-27  Score=208.62  Aligned_cols=159  Identities=16%  Similarity=0.254  Sum_probs=125.5

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc------
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP------  144 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~------  144 (258)
                      ..+||+|+||.||+|...     .++ .||+|++......     ..+|+.+++.+ +||||+++++++...+.      
T Consensus        45 ~~~lG~G~~g~V~~a~~~-----~~~-~~aikk~~~~~~~-----~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           45 CKVIGNGSFGVVFQAKLV-----ESD-EVAIKKVLQDKRF-----KNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEETTEEEEEEEET-----TTE-EEEEEEEECCTTS-----CCHHHHHHHTC-CCTTBCCEEEEEEEESSSSSCEE
T ss_pred             eEEEeeCCCeEEEEEEEC-----CCC-eEEEEEEecCcch-----HHHHHHHHHhC-CCCCcceEEEEEEecCCCCCceE
Confidence            448999999999999986     344 4888888643221     23699999999 99999999999965443      


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +++||||+++ ++...+.....             ....+++..++.++.||+.||.|||++||+|||||          
T Consensus       113 ~~lv~e~~~~-~l~~~~~~~~~-------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~  178 (394)
T 4e7w_A          113 LNLVLEYVPE-TVYRASRHYAK-------------LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPS  178 (394)
T ss_dssp             EEEEEECCSE-EHHHHHHHHHH-------------TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT
T ss_pred             EEEEeeccCc-cHHHHHHHHHh-------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCC
Confidence            8899999987 55554443211             01349999999999999999999999999999995          


Q ss_pred             ----ccCCCcceeeeccC--CccccccccccccccccC-CCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                          ++|||+++......  ....+|+.|+|||++.+. .|+.++||.
T Consensus       179 ~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  226 (394)
T 4e7w_A          179 GVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIW  226 (394)
T ss_dssp             TEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHH
T ss_pred             CcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHH
Confidence                78999998754332  467889999999999765 589999974

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=3.9e-28  Score=206.97  Aligned_cols=153  Identities=18%  Similarity=0.284  Sum_probs=122.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHH--HHHhcCCCcccceeeeEEc-----CCcE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM--MKMIGQHINIINLLGVCTQ-----DGPL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~~h~nIv~l~~~~~~-----~~~~  145 (258)
                      .||+|+||.||+|...       +..||||+++..    ....+..|.++  +..+ +||||+++++.+..     ...+
T Consensus        20 ~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~----~~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           20 LIGRGRYGAVYKGSLD-------ERPVAVKVFSFA----NRQNFINEKNIYRVPLM-EHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             EEEECSSEEEEEEEET-------TEEEEEEEEEGG----GHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECTTSCEEE
T ss_pred             ecccCCCeEEEEEEEC-------CeEEEEEEeecc----chhhHHHHHHHHHHHhc-cCcchhhheecccccccCCCceE
Confidence            8999999999999764       489999999743    22334445544  4457 99999999986543     2257


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC---------CccccCcc--
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR---------KVGNDAVR--  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---------~iiH~DlK--  214 (258)
                      ++||||+++|+|.+++....                  .++..++.++.||+.||.|||++         +|+|||||  
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~  149 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHT------------------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSR  149 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCC------------------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGG
T ss_pred             EEEEecCCCCcHHHHHhhcc------------------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccc
Confidence            89999999999999997654                  68999999999999999999999         99999996  


Q ss_pred             -----------ccCCCcceeeecc-----------CCcccccccccccccccc-------CCCCccccee
Q psy12228        215 -----------FIGFDLCILVFFH-----------DSTLLKTTSTIASLILRN-------QKVSVLLDLI  255 (258)
Q Consensus       215 -----------i~dfgl~~~~~~~-----------~~~~~gt~~y~aPE~~~~-------~~~s~~~Dv~  255 (258)
                                 ++|||+++.....           .....||+.|+|||++.+       ..++.++||.
T Consensus       150 Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diw  219 (336)
T 3g2f_A          150 NVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMY  219 (336)
T ss_dssp             GEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHH
T ss_pred             eEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchH
Confidence                       7899999865322           125579999999999987       4667888874

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.95  E-value=1.4e-27  Score=200.74  Aligned_cols=163  Identities=16%  Similarity=0.270  Sum_probs=132.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---ChHHHHHHHHHHHHHHHhcCCCcccceeeeEE--cCCcE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---SDAEMMDLVSEMEMMKMIGQHINIINLLGVCT--QDGPL  145 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~--~~~~~  145 (258)
                      ...||+|+||.||++...     .++..||+|+++...   .......+.+|+.+++.+ +||||+++++++.  +.+..
T Consensus        10 ~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C           10 GDLLGEGSYGKVKEVLDS-----ETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             CCEEEECSSCEEEEEEBT-----TTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---CE
T ss_pred             eeEEecCCCeEEEEEEEC-----CCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCeE
Confidence            348999999999999987     578899999996431   123456799999999999 9999999999985  44578


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++||||+++| |.+++.....               ..+++..+..++.||+.||.|||++||+|||||           
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~---------------~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~  147 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPE---------------KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT  147 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTT---------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred             EEEehhccCC-HHHHHHhCcc---------------cccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCc
Confidence            9999999975 8888876443               348999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeeccC-----CccccccccccccccccCCC--Cccccee
Q psy12228        215 --FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKV--SVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~--s~~~Dv~  255 (258)
                        ++|||++.......     ....||+.|+|||++.+...  +.++||.
T Consensus       148 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~  197 (305)
T 2wtk_C          148 LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIW  197 (305)
T ss_dssp             EEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHH
T ss_pred             EEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHH
Confidence              78999998654221     35678999999999987443  7789974

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.95  E-value=1.1e-27  Score=206.11  Aligned_cols=161  Identities=16%  Similarity=0.189  Sum_probs=121.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc-------E
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP-------L  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~-------~  145 (258)
                      .||+|+||.||+|...     .++..||||++....  .....+.+|+..+..+ +||||+++++++...+.       .
T Consensus        30 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~  101 (360)
T 3e3p_A           30 MAGQGTFGTVQLGKEK-----STGMSVAIKKVIQDP--RFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDIYL  101 (360)
T ss_dssp             ---------CEEEEET-----TTCCEEEEEEEECCT--TCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred             EEecCCCeEEEEEEEC-----CCCCEEEEEEEecCc--cccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccceeE
Confidence            8999999999999987     578999999986532  2233567888889999 99999999999976443       8


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--hCCccccCcc---------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQ--SRKVGNDAVR---------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH--~~~iiH~DlK---------  214 (258)
                      ++||||+++ +|...+.....             ....+++..+..++.|++.||.|||  ++||+|||||         
T Consensus       102 ~lv~e~~~~-~l~~~~~~~~~-------------~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~  167 (360)
T 3e3p_A          102 NVVMEYVPD-TLHRCCRNYYR-------------RQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA  167 (360)
T ss_dssp             EEEEECCSC-BHHHHHHHHHT-------------TTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETT
T ss_pred             EEEeecccc-cHHHHHHHHhh-------------cccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCC
Confidence            899999986 66665553211             1134899999999999999999999  9999999995         


Q ss_pred             -----ccCCCcceeeeccC--CccccccccccccccccCC-CCccccee
Q psy12228        215 -----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQK-VSVLLDLI  255 (258)
Q Consensus       215 -----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~-~s~~~Dv~  255 (258)
                           ++|||+++......  ....||+.|+|||++.+.. ++.++||.
T Consensus       168 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~  216 (360)
T 3e3p_A          168 DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIW  216 (360)
T ss_dssp             TTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHH
T ss_pred             CCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHH
Confidence                 78999998654433  4567899999999987654 89999974

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.95  E-value=5.5e-28  Score=204.10  Aligned_cols=162  Identities=19%  Similarity=0.216  Sum_probs=131.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-----HHHHHHHHHHHHHHHhc---CCCcccceeeeEEcCC
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-----AEMMDLVSEMEMMKMIG---QHINIINLLGVCTQDG  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~---~h~nIv~l~~~~~~~~  143 (258)
                      ..||+|+||.||+|...     .++..||||+++.....     .....+.+|+.++..+.   +||||+++++++.+.+
T Consensus        37 ~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~  111 (312)
T 2iwi_A           37 PLLGKGGFGTVFAGHRL-----TDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE  111 (312)
T ss_dssp             EEEEEETTEEEEEEECT-----TTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC----
T ss_pred             eEEEcCCCEEEEEEEEc-----cCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC
Confidence            38999999999999986     57789999999754221     12344667999998885   6999999999999888


Q ss_pred             cEEEEEEe-CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------
Q psy12228        144 PLYVIVEF-APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------  214 (258)
Q Consensus       144 ~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------  214 (258)
                      ..++|||+ +.+++|.+++.....                 +++..++.++.||+.||.|||++||+|||||        
T Consensus       112 ~~~~v~e~~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  174 (312)
T 2iwi_A          112 GFMLVLERPLPAQDLFDYITEKGP-----------------LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL  174 (312)
T ss_dssp             -CEEEEECCSSEEEHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET
T ss_pred             eEEEEEEecCCCCCHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC
Confidence            99999999 788999999988765                 9999999999999999999999999999995        


Q ss_pred             ------ccCCCcceeeeccC-CccccccccccccccccCCC-Cccccee
Q psy12228        215 ------FIGFDLCILVFFHD-STLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       215 ------i~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                            ++|||++....... ....||+.|+|||++.+..+ +.++||.
T Consensus       175 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~  223 (312)
T 2iwi_A          175 RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVW  223 (312)
T ss_dssp             TTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHH
T ss_pred             CCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHH
Confidence                  78999998654433 46678999999999987776 4588874

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.95  E-value=3.9e-28  Score=207.91  Aligned_cols=162  Identities=15%  Similarity=0.214  Sum_probs=134.9

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh----------------HHHHHHHHHHHHHHHhcCCCcccc
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD----------------AEMMDLVSEMEMMKMIGQHINIIN  134 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~----------------~~~~~~~~E~~~l~~l~~h~nIv~  134 (258)
                      ...||+|+||.||+|...       +..||||++......                ...+.+.+|+.+++.+ +||||++
T Consensus        36 ~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~  107 (348)
T 2pml_X           36 IRTLNQGKFNKIILCEKD-------NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLT  107 (348)
T ss_dssp             EEEEECCSSCCEEEEEET-------TEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTBCC
T ss_pred             EEEEcCCCCeEEEEEEcC-------CceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCcce
Confidence            348999999999999873       489999999642110                1126799999999999 9999999


Q ss_pred             eeeeEEcCCcEEEEEEeCCCCCHHHH------HhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CC
Q psy12228        135 LLGVCTQDGPLYVIVEFAPHGNLRDF------LRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RK  207 (258)
Q Consensus       135 l~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~  207 (258)
                      +++++.+.+..++||||+++|+|.++      +....               ...+++..++.++.|++.||.|||+ +|
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~  172 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY---------------TCFIPIQVIKCIIKSVLNSFSYIHNEKN  172 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS---------------CCCCCHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc---------------ccCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999999999999998      44321               2349999999999999999999999 99


Q ss_pred             ccccCcc-------------ccCCCcceeeecc-CCccccccccccccccccC-CCCc-cccee
Q psy12228        208 VGNDAVR-------------FIGFDLCILVFFH-DSTLLKTTSTIASLILRNQ-KVSV-LLDLI  255 (258)
Q Consensus       208 iiH~DlK-------------i~dfgl~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~s~-~~Dv~  255 (258)
                      |+|||||             ++|||++...... .....||+.|+|||++.+. .++. ++||.
T Consensus       173 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~  236 (348)
T 2pml_X          173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIW  236 (348)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHH
T ss_pred             EeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHH
Confidence            9999995             7899999865333 2567899999999999887 6766 88874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.95  E-value=1.9e-27  Score=210.06  Aligned_cols=164  Identities=23%  Similarity=0.225  Sum_probs=123.2

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +.+||+|+||.||.+..      .+++.||||++...    ..+.+.+|+.+++.+.+||||+++++++.+++..++|||
T Consensus        20 ~~~LG~G~~g~V~~~~~------~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E   89 (434)
T 2rio_A           20 EKILGYGSSGTVVFQGS------FQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE   89 (434)
T ss_dssp             EEEEEECSTTCEEEEEE------SSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCeEeeCCCeEEEEEEE------ECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence            34899999999986543      35789999999642    234578999999886589999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+. |+|.+++.......          ......++..++.++.||+.||.|||++||+|||||                
T Consensus        90 ~~~-gsL~~~l~~~~~~~----------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~  158 (434)
T 2rio_A           90 LCN-LNLQDLVESKNVSD----------ENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQ  158 (434)
T ss_dssp             CCS-EEHHHHHHTC----------------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCC
T ss_pred             cCC-CCHHHHHhccCCCc----------hhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCccccccc
Confidence            996 59999998754310          000112344567899999999999999999999985                


Q ss_pred             ----------ccCCCcceeeeccC-------Ccccccccccccccccc-------CCCCccccee
Q psy12228        215 ----------FIGFDLCILVFFHD-------STLLKTTSTIASLILRN-------QKVSVLLDLI  255 (258)
Q Consensus       215 ----------i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~-------~~~s~~~Dv~  255 (258)
                                ++|||+++......       ....||+.|+|||++.+       ..++.++||.
T Consensus       159 ~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diw  223 (434)
T 2rio_A          159 QTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIF  223 (434)
T ss_dssp             TTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHH
T ss_pred             ccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhH
Confidence                      67999998654432       24579999999999976       6789999974

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.94  E-value=1.7e-27  Score=210.18  Aligned_cols=158  Identities=18%  Similarity=0.204  Sum_probs=124.0

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..+||+|+||.|+....      .+++.||||++.....    ..+.+|+.+++.+.+|||||++++++.+....++|||
T Consensus        29 ~~~LG~G~~G~V~~~~~------~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           29 KDVLGHGAEGTIVYRGM------FDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             EEEEEECGGGCEEEEEE------SSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCeeecCcCEEEEEEEE------eCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            34899999999654333      2568899999975322    2356899999998679999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+. |+|.+++.....                .+.+..++.++.||+.||.|||+++|+|||||                
T Consensus        99 ~~~-g~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~  161 (432)
T 3p23_A           99 LCA-ATLQEYVEQKDF----------------AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIK  161 (432)
T ss_dssp             CCS-EEHHHHHHSSSC----------------CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCC
T ss_pred             CCC-CCHHHHHHhcCC----------------CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCcee
Confidence            997 599999987543                14455677899999999999999999999995                


Q ss_pred             --ccCCCcceeeecc------CCccccccccccccccc---cCCCCccccee
Q psy12228        215 --FIGFDLCILVFFH------DSTLLKTTSTIASLILR---NQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~---~~~~s~~~Dv~  255 (258)
                        ++|||+++.....      .....||+.|+|||++.   ...++.++||.
T Consensus       162 ~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~Diw  213 (432)
T 3p23_A          162 AMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIF  213 (432)
T ss_dssp             EEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHH
T ss_pred             EEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHH
Confidence              6899999865432      23567999999999998   45678899974

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.94  E-value=1.4e-26  Score=195.58  Aligned_cols=160  Identities=12%  Similarity=0.148  Sum_probs=115.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHH-HHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSE-MEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E-~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...     .++..||||++...........+..| ..+++.+ +||||+++++++.+++..++||||
T Consensus        32 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~  105 (318)
T 2dyl_A           32 EMGSGTCGQVWKMRFR-----KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIAMEL  105 (318)
T ss_dssp             EC------CEEEEEET-----TTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eeeecCCeeEEEEEEe-----cCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEEEec
Confidence            7999999999999987     57889999999865444444444444 4566777 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------ccC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FIG  217 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~d  217 (258)
                      + ++.+..+......                .+++..+..++.|++.||.|||++ ||+|||||             ++|
T Consensus       106 ~-~~~~~~l~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~d  168 (318)
T 2dyl_A          106 M-GTCAEKLKKRMQG----------------PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCD  168 (318)
T ss_dssp             C-SEEHHHHHHHHTS----------------CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECC
T ss_pred             c-CCcHHHHHHHhcc----------------CCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEE
Confidence            9 4466555554332                389999999999999999999996 99999995             789


Q ss_pred             CCcceeeeccC--Cccccccccccccccc-----cCCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILR-----NQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~-----~~~~s~~~Dv~  255 (258)
                      ||++.......  ....+|+.|+|||++.     ...++.++||.
T Consensus       169 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~  213 (318)
T 2dyl_A          169 FGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVW  213 (318)
T ss_dssp             CTTC--------------CCTTCCHHHHC--------CCTHHHHH
T ss_pred             CCCchhccCCccccccCCCccccChhhcccccccccCCccccchh
Confidence            99987544332  4567899999999994     56788999974

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.94  E-value=4.3e-28  Score=205.18  Aligned_cols=158  Identities=18%  Similarity=0.274  Sum_probs=130.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...        ..+|+|+++... .....+.+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus        40 ~lg~G~~g~V~~~~~~--------~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~iv~e~  110 (319)
T 2y4i_B           40 LIGKGRFGQVYHGRWH--------GEVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAIITSL  110 (319)
T ss_dssp             BCCCSSSSEEEEEEES--------SSEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEEECBC
T ss_pred             EeccCCceEEEEEEEc--------CeEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEEEeec
Confidence            8999999999999986        249999997532 223345678899999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------ccCCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------FIGFD  219 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------i~dfg  219 (258)
                      +++++|.+++.....                .+++..++.++.||+.||.|||++||+|||||            ++|||
T Consensus       111 ~~~~~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg  174 (319)
T 2y4i_B          111 CKGRTLYSVVRDAKI----------------VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFG  174 (319)
T ss_dssp             CCSEEHHHHTTSSCC----------------CCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCS
T ss_pred             ccCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecC
Confidence            999999999976542                38999999999999999999999999999995            78999


Q ss_pred             cceeeecc--------CCcccccccccccccccc---------CCCCccccee
Q psy12228        220 LCILVFFH--------DSTLLKTTSTIASLILRN---------QKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~--------~~~~~gt~~y~aPE~~~~---------~~~s~~~Dv~  255 (258)
                      ++......        .....||+.|+|||++.+         ..++.++||.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~  227 (319)
T 2y4i_B          175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVF  227 (319)
T ss_dssp             CCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHH
T ss_pred             CccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHH
Confidence            97654211        134568999999999975         4578899974

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.94  E-value=6.6e-26  Score=189.58  Aligned_cols=147  Identities=13%  Similarity=0.080  Sum_probs=120.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .+++.||||+++....  ....+.+.+|+.++..+ +||||+++++++.+++..++|||
T Consensus        38 ~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e  111 (286)
T 3uqc_A           38 FHGGVPPLQFWQALDT-----ALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGLVVAE  111 (286)
T ss_dssp             EEEBSTTCEEEEEEET-----TTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEcccCCeEEEEEEec-----CCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEEEEEE
Confidence            8999999999999987     5789999999976533  44567899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCccccCCCcceeeeccCCc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVRFIGFDLCILVFFHDST  230 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlKi~dfgl~~~~~~~~~~  230 (258)
                      |+++++|.+++...                   ....++..|+.|++.||.|||++||+|||||+.++-+..    ....
T Consensus       112 ~~~g~~L~~~l~~~-------------------~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~----~g~~  168 (286)
T 3uqc_A          112 WIRGGSLQEVADTS-------------------PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI----DGDV  168 (286)
T ss_dssp             CCCEEEHHHHHTTC-------------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEET----TSCE
T ss_pred             ecCCCCHHHHHhcC-------------------CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcC----CCCE
Confidence            99999999998532                   455678899999999999999999999999977653321    1122


Q ss_pred             cccccccccccccccCCCCccccee
Q psy12228        231 LLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       231 ~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ..+++.|++|       ++.++||.
T Consensus       169 kl~~~~~~~~-------~~~~~Di~  186 (286)
T 3uqc_A          169 VLAYPATMPD-------ANPQDDIR  186 (286)
T ss_dssp             EECSCCCCTT-------CCHHHHHH
T ss_pred             EEEeccccCC-------CCchhHHH
Confidence            3446667664       57777753

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.92  E-value=6.6e-26  Score=205.11  Aligned_cols=151  Identities=13%  Similarity=0.093  Sum_probs=116.6

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--h-----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--D-----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG  143 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~-----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~  143 (258)
                      ..+||+|+||.||+|...       +..+++|.......  .     ...+++.+|+++++++ +||||+.+..++...+
T Consensus       341 ~~~LG~G~fg~Vy~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~  412 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYL-------DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLD  412 (540)
T ss_dssp             -------CCEEEEEEECS-------SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETT
T ss_pred             CCEEeeCCCEEEEEEEEC-------CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCC
Confidence            448999999999999554       47788888743221  1     1235689999999999 9999997777777777


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      ..+|||||+++|+|.+++..                         +..++.|++.||.|||+++|+|||||         
T Consensus       413 ~~~lVmE~~~ggsL~~~l~~-------------------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~  467 (540)
T 3en9_A          413 NKRIMMSYINGKLAKDVIED-------------------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKD  467 (540)
T ss_dssp             TTEEEEECCCSEEHHHHSTT-------------------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESSS
T ss_pred             ccEEEEECCCCCCHHHHHHH-------------------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECCe
Confidence            88999999999999999864                         34799999999999999999999986         


Q ss_pred             --ccCCCcceeeeccC----------Ccccccccccccccccc--CCCCcccce
Q psy12228        215 --FIGFDLCILVFFHD----------STLLKTTSTIASLILRN--QKVSVLLDL  254 (258)
Q Consensus       215 --i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~--~~~s~~~Dv  254 (258)
                        ++|||+++......          ....||+.|||||++..  ..|+..+|+
T Consensus       468 ~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~  521 (540)
T 3en9_A          468 LYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDR  521 (540)
T ss_dssp             EEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhH
Confidence              78999999765432          36789999999999987  566666553

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.92  E-value=2.9e-24  Score=180.42  Aligned_cols=116  Identities=20%  Similarity=0.250  Sum_probs=102.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPLYVI  148 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~~lv  148 (258)
                      +||+|+||.||+|...     .++..||+|+++..      ..+.+|+.++.++.+||||+++++++..    ....++|
T Consensus        25 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv   93 (299)
T 3m2w_A           25 VLGLGINGKVLQIFNK-----RTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   93 (299)
T ss_dssp             EEEEETTEEEEEEEET-----TTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             ccccCCCeEEEEEEEc-----CCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence            7999999999999987     57899999999742      3467899988555599999999999976    5678999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK  214 (258)
                      |||+++|+|.+++.....               ..+++..++.++.|++.||.|||+++|+|||||
T Consensus        94 ~e~~~~~~L~~~l~~~~~---------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlk  144 (299)
T 3m2w_A           94 MECLDGGELFSRIQDRGD---------------QAFTEREASEIMKSIGEAIQYLHSINIAHRDVK  144 (299)
T ss_dssp             ECCCCSCBHHHHHHHCTT---------------CCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EeecCCCcHHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            999999999999988643               349999999999999999999999999999996

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.92  E-value=1.5e-25  Score=196.72  Aligned_cols=168  Identities=10%  Similarity=0.014  Sum_probs=122.3

Q ss_pred             ceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCC-Cccccee----------
Q psy12228         70 QEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQH-INIINLL----------  136 (258)
Q Consensus        70 ~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h-~nIv~l~----------  136 (258)
                      ...+||+|+||.||+|.+.     .+++.||||+++....  ....+.+.+|+.+++.+ .| +|...+.          
T Consensus        82 ~~~~LG~G~fG~Vy~a~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           82 RGTVLGQEDPYAYLEATDQ-----ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             EEEEEEEETTEEEEEEEET-----TTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCCCCE
T ss_pred             EecccccCCCEEEEEEEec-----CCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhcccccchh
Confidence            3458999999999999987     5788999999974322  22357799999999999 65 3222111          


Q ss_pred             -----------eeEEc-----CCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy12228        137 -----------GVCTQ-----DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGM  200 (258)
Q Consensus       137 -----------~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl  200 (258)
                                 .++..     ....+++|+++ +++|.+++......          ......+++..++.++.||+.||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~----------~~~~~~l~~~~~~~i~~qi~~aL  224 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH----------SSTHKSLVHHARLQLTLQVIRLL  224 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHH----------TTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcc----------cccCCCCCHHHHHHHHHHHHHHH
Confidence                       11111     12467777766 46999998632100          00123478889999999999999


Q ss_pred             HHHhhCCccccCcc-------------ccCCCcceeeeccCCcccccccccccccc----------ccCCCCccccee
Q psy12228        201 HYLQSRKVGNDAVR-------------FIGFDLCILVFFHDSTLLKTTSTIASLIL----------RNQKVSVLLDLI  255 (258)
Q Consensus       201 ~yLH~~~iiH~DlK-------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~s~~~Dv~  255 (258)
                      .|||+++|+|||||             ++|||+++.........+| +.|+|||++          .+..++.++||.
T Consensus       225 ~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dvw  301 (413)
T 3dzo_A          225 ASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTW  301 (413)
T ss_dssp             HHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHH
T ss_pred             HHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHH
Confidence            99999999999996             7899999865555566778 999999999          666788899974

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.85  E-value=7.9e-22  Score=164.50  Aligned_cols=129  Identities=14%  Similarity=0.117  Sum_probs=101.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-----------------HHHHHHHHHHHHHHHhcCCCcccc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-----------------AEMMDLVSEMEMMKMIGQHINIIN  134 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~l~~h~nIv~  134 (258)
                      ..||+|+||.||+|...      ++..||||+++.....                 .....+.+|+.+++.+ +  | ++
T Consensus        96 ~~iG~G~~g~Vy~~~~~------~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l-~--~-~~  165 (282)
T 1zar_A           96 KLMGEGKESAVFNCYSE------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-Q--G-LA  165 (282)
T ss_dssp             EEEEECSSEEEEEEEET------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-T--T-SS
T ss_pred             CEeccCCCceEEEEEeC------CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc-c--C-CC
Confidence            58999999999999973      5689999999643211                 2356799999999999 5  5 67


Q ss_pred             eeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc
Q psy12228        135 LLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR  214 (258)
Q Consensus       135 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK  214 (258)
                      +++++.. +..++||||+++|+|.+ +..                       .....++.|++.||.|||++||+|||||
T Consensus       166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----------------------~~~~~i~~qi~~~l~~lH~~giiHrDlk  220 (282)
T 1zar_A          166 VPKVYAW-EGNAVLMELIDAKELYR-VRV-----------------------ENPDEVLDMILEEVAKFYHRGIVHGDLS  220 (282)
T ss_dssp             SCCEEEE-ETTEEEEECCCCEEGGG-CCC-----------------------SCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             cCeEEec-cceEEEEEecCCCcHHH-cch-----------------------hhHHHHHHHHHHHHHHHHHCCCEeCCCC
Confidence            7776543 56799999999999987 421                       1234699999999999999999999996


Q ss_pred             ------------ccCCCcceeeeccCCcccccccccccccccc
Q psy12228        215 ------------FIGFDLCILVFFHDSTLLKTTSTIASLILRN  245 (258)
Q Consensus       215 ------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~  245 (258)
                                  ++|||+++          .+..++|||++..
T Consensus       221 p~NILl~~~~vkl~DFG~a~----------~~~~~~a~e~l~r  253 (282)
T 1zar_A          221 QYNVLVSEEGIWIIDFPQSV----------EVGEEGWREILER  253 (282)
T ss_dssp             TTSEEEETTEEEECCCTTCE----------ETTSTTHHHHHHH
T ss_pred             HHHEEEECCcEEEEECCCCe----------ECCCCCHHHHHHH
Confidence                        67888876          3456889998864

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.74  E-value=6.6e-18  Score=138.91  Aligned_cols=124  Identities=15%  Similarity=0.121  Sum_probs=91.7

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEE--EEEEEecCCCCh-----------------------HHHHHHHHHHHHHHH
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITT--VAVKMLKEGHSD-----------------------AEMMDLVSEMEMMKM  125 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~--vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~  125 (258)
                      ...||+|+||.||+|...     .++..  ||||+++.....                       .....+.+|+.+|..
T Consensus        52 ~~~ig~G~~g~Vy~a~~~-----~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           52 GGVISTGKEANVFYADGV-----FDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             EEEEEECSSEEEEEEEEE-----ETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             CCEEeecceEEEEEEEEc-----CCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            348999999999999984     35677  999997643111                       112368899999999


Q ss_pred             hcCCCcc--cceeeeEEcCCcEEEEEEeCCC-C----CHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy12228        126 IGQHINI--INLLGVCTQDGPLYVIVEFAPH-G----NLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVAN  198 (258)
Q Consensus       126 l~~h~nI--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~  198 (258)
                      + .|+++  +.++..    +..+|||||+.+ |    +|.++...                    .++..+..++.|++.
T Consensus       127 l-~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------------------~~~~~~~~i~~qi~~  181 (258)
T 1zth_A          127 A-KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------------------LKELDVEGIFNDVVE  181 (258)
T ss_dssp             H-HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------------------GGGSCHHHHHHHHHH
T ss_pred             H-HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------------------cChHHHHHHHHHHHH
Confidence            9 77764  333332    356899999942 4    67666432                    234467889999999


Q ss_pred             HHHHHh-hCCccccCcc-----------ccCCCcceee
Q psy12228        199 GMHYLQ-SRKVGNDAVR-----------FIGFDLCILV  224 (258)
Q Consensus       199 gl~yLH-~~~iiH~DlK-----------i~dfgl~~~~  224 (258)
                      ||.||| ++||+|||||           ++|||+|...
T Consensus       182 ~l~~lH~~~givHrDlkp~NILl~~~~~liDFG~a~~~  219 (258)
T 1zth_A          182 NVKRLYQEAELVHADLSEYNIMYIDKVYFIDMGQAVTL  219 (258)
T ss_dssp             HHHHHHHTSCEECSSCSTTSEEESSSEEECCCTTCEET
T ss_pred             HHHHHHHHCCEEeCCCCHHHEEEcCcEEEEECcccccC
Confidence            999999 9999999986           6899998753

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.55  E-value=2.8e-15  Score=129.12  Aligned_cols=115  Identities=10%  Similarity=-0.007  Sum_probs=75.9

Q ss_pred             cceeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-------------hHHHHH--------HHHHHHHHHHhc
Q psy12228         69 SQEYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-------------DAEMMD--------LVSEMEMMKMIG  127 (258)
Q Consensus        69 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~--------~~~E~~~l~~l~  127 (258)
                      .....||+|+||.||+|...      +|+.||||+++....             ......        ..+|...|.++ 
T Consensus        98 ~I~~~IG~Gk~a~VY~a~d~------~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL-  170 (397)
T 4gyi_A           98 SVGSRIGVGKESDIMIVADE------KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL-  170 (397)
T ss_dssp             EEEEEEEECSSEEEEEEECT------TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             EecCEeeeCCceEEEEEECC------CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-
Confidence            44558999999999999864      578999999853210             000111        23466666666 


Q ss_pred             CCCcccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q psy12228        128 QHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK  207 (258)
Q Consensus       128 ~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~  207 (258)
                      .+.++.. ...+.. ...+|||||+++++|.++.                       ..+....++.||+.+|.|||++|
T Consensus       171 ~~~gv~v-p~p~~~-~~~~LVME~i~G~~L~~l~-----------------------~~~~~~~l~~qll~~l~~lH~~g  225 (397)
T 4gyi_A          171 YEEGFPV-PEPIAQ-SRHTIVMSLVDALPMRQVS-----------------------SVPDPASLYADLIALILRLAKHG  225 (397)
T ss_dssp             HHTTCSC-CCEEEE-ETTEEEEECCSCEEGGGCC-----------------------CCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCCC-Ceeeec-cCceEEEEecCCccHhhhc-----------------------ccHHHHHHHHHHHHHHHHHHHCC
Confidence            4433321 111111 1237999999988875432                       11234568899999999999999


Q ss_pred             ccccCccc
Q psy12228        208 VGNDAVRF  215 (258)
Q Consensus       208 iiH~DlKi  215 (258)
                      |||||||.
T Consensus       226 IVHrDLKp  233 (397)
T 4gyi_A          226 LIHGDFNE  233 (397)
T ss_dssp             EECSCCST
T ss_pred             CcCCCCCH
Confidence            99999973

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.01  E-value=7.2e-10  Score=90.61  Aligned_cols=103  Identities=15%  Similarity=0.063  Sum_probs=78.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .++.|+.+.||++...       +..+++|+...... .....+.+|+.+++.+..+.++.++++++.+.+..++||||+
T Consensus        21 ~~~g~s~~~v~~~~~~-------~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i   92 (263)
T 3tm0_A           21 DTEGMSPAKVYKLVGE-------NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA   92 (263)
T ss_dssp             CCSCCSSSEEEEEECS-------SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             eccCCCCCeEEEEECC-------CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEec
Confidence            4567778899988643       36899999864211 112358899999999966788889999998888899999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS  205 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~  205 (258)
                      +|.+|.+.+..                      ......++.+++.+|..||+
T Consensus        93 ~G~~l~~~~~~----------------------~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           93 DGVLCSEEYED----------------------EQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             SSEEHHHHCCT----------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             CCeehhhccCC----------------------cccHHHHHHHHHHHHHHHhC
Confidence            99998876321                      12234678899999999998

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.79  E-value=1.7e-08  Score=86.35  Aligned_cols=107  Identities=9%  Similarity=0.109  Sum_probs=75.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEec--CCCChHHHHHHHHHHHHHHHhcC-CCcccceeeeEEcC---CcEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLK--EGHSDAEMMDLVSEMEMMKMIGQ-HINIINLLGVCTQD---GPLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~~-h~nIv~l~~~~~~~---~~~~  146 (258)
                      .++.|.++.||+....       +..+++|+..  ..........+.+|+.+++.+.. +..++++++++.+.   +..+
T Consensus        45 ~l~~G~sn~~y~v~~~-------~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~  117 (359)
T 3dxp_A           45 QFKGGQSNPTFKLVTP-------GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF  117 (359)
T ss_dssp             ECCC-CCSCEEEEECS-------SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred             EcCCcccceEEEEEEC-------CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence            6788999999998764       2578888876  33212223468899999999933 35678899988766   3588


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS  205 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~  205 (258)
                      +||||++|..+.+..  .                 ..++..+...++.+++..|..||+
T Consensus       118 ~vme~v~G~~l~~~~--~-----------------~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          118 YIMEFVSGRVLWDQS--L-----------------PGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             EEEECCCCBCCCCTT--C-----------------TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCeecCCCc--c-----------------ccCCHHHHHHHHHHHHHHHHHHhC
Confidence            999999987764311  1                 127788889999999999999997

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.69  E-value=6.2e-08  Score=78.53  Aligned_cols=73  Identities=19%  Similarity=0.210  Sum_probs=54.7

Q ss_pred             ecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCC-cccceeeeEEcCCcEEEEEEeCCC
Q psy12228         76 KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHI-NIINLLGVCTQDGPLYVIVEFAPH  154 (258)
Q Consensus        76 ~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~-nIv~l~~~~~~~~~~~lv~e~~~~  154 (258)
                      .|..+.||++...      ++..+++|.....    ....+.+|+.+++.+..+. .+.+++++...++..++||||++|
T Consensus        30 gg~~~~v~~~~~~------~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G   99 (264)
T 1nd4_A           30 GCSDAAVFRLSAQ------GRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG   99 (264)
T ss_dssp             TTSSCEEEEEECT------TSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             CCCCceEEEEecC------CCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCC
Confidence            5556899998653      4567999998653    1234778999999994442 256788888887789999999999


Q ss_pred             CCHH
Q psy12228        155 GNLR  158 (258)
Q Consensus       155 g~L~  158 (258)
                      .+|.
T Consensus       100 ~~l~  103 (264)
T 1nd4_A          100 QDLL  103 (264)
T ss_dssp             EETT
T ss_pred             cccC
Confidence            8774

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.64  E-value=0.00024  Score=58.94  Aligned_cols=101  Identities=14%  Similarity=0.044  Sum_probs=69.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCc--ccceeeeEEcCC---cEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHIN--IINLLGVCTQDG---PLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~n--Iv~l~~~~~~~~---~~~l  147 (258)
                      .++.|....||+..          ..+++|+...   ......+.+|+.+|+.+..+..  +.+++......+   ..++
T Consensus        27 ~~~~G~~n~v~~v~----------~~~vlR~~~~---~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~   93 (304)
T 3sg8_A           27 ISGEGNDCIAYEIN----------RDFIFKFPKH---SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFA   93 (304)
T ss_dssp             EEEECSSEEEEEST----------TSEEEEEESS---HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCE
T ss_pred             ecCCCCcceEEEEC----------CEEEEEecCC---cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceE
Confidence            57899999999753          3488888653   2445678999999998844433  334444433332   3578


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS  205 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~  205 (258)
                      |||+++|.+|......  .                 ++..+...++.+++..|..||+
T Consensus        94 vm~~i~G~~l~~~~~~--~-----------------l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           94 GFTKIKGVPLTPLLLN--N-----------------LPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             EEECCCCEECCHHHHH--T-----------------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcccCCeECCccccc--c-----------------CCHHHHHHHHHHHHHHHHHHHc
Confidence            9999999887653322  1                 6777777888888888888875

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.51  E-value=0.00093  Score=54.13  Aligned_cols=103  Identities=11%  Similarity=0.026  Sum_probs=76.3

Q ss_pred             eeecCce-EEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         74 KIKCAFG-KVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        74 ig~G~fg-~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +..|..| .||+....     ..+..+.+|+-..    .....+.+|...|+.+..+-.+.++++++.+++..++|||++
T Consensus        32 ~~~G~S~~~v~rl~~~-----~~~~~~~lk~~~~----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l  102 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGK-----PNAPELFLKHGKG----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAI  102 (272)
T ss_dssp             EECSSSSCEEEEEECC-----TTCCCEEEEEEET----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             ccCCCcCCeEEEEEec-----CCCeEEEEEECCC----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEee
Confidence            3445555 68876654     3456788998753    234568899999999966666788999999888999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR  206 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~  206 (258)
                      ++.++.+......                     .....++.+++..|.-||+.
T Consensus       103 ~G~~~~~~~~~~~---------------------~~~~~~~~~l~~~L~~Lh~~  135 (272)
T 4gkh_A          103 PGKTAFQVLEEYP---------------------DSGENIVDALAVFLRRLHSI  135 (272)
T ss_dssp             CSEEHHHHHHHCG---------------------GGHHHHHHHHHHHHHHHHTS
T ss_pred             CCccccccccCCH---------------------HHHHHHHHHHHHHHHHhcCC
Confidence            9988887665421                     23446778888999999974

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.16  E-value=0.0076  Score=49.95  Aligned_cols=104  Identities=18%  Similarity=0.092  Sum_probs=77.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCC--cccceeeeEE-cCCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHI--NIINLLGVCT-QDGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~--nIv~l~~~~~-~~~~~~lv~  149 (258)
                      .++.|....||..  .        ..+++|+-.   .......+.+|+.+|..+..+-  .+.+++.++. ..+..++||
T Consensus        26 ~l~~G~~n~v~~v--g--------~~~VlR~~~---~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~   92 (306)
T 3tdw_A           26 SLGEGFRNYAILV--N--------GDWVFRFPK---SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGY   92 (306)
T ss_dssp             EEEECSSEEEEEE--T--------TTEEEEEES---SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEE
T ss_pred             ecCCCcceeEEEE--C--------CEEEEEecC---CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEE
Confidence            5678888889876  2        457888853   3344567899999999994432  3566777764 445678999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      |+++|.+|......  .                 ++..+...++.+++..|..||+...
T Consensus        93 e~i~G~~l~~~~~~--~-----------------l~~~~~~~~~~~lg~~La~LH~~~~  132 (306)
T 3tdw_A           93 RKVQGQILGEDGMA--V-----------------LPDDAKDRLALQLAEFMNELSAFPV  132 (306)
T ss_dssp             ECCCSEECHHHHHT--T-----------------SCHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             eccCCeECchhhhh--h-----------------CCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            99999888764322  1                 6788889999999999999998643

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.52  E-value=0.018  Score=47.96  Aligned_cols=94  Identities=14%  Similarity=0.176  Sum_probs=71.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC--CcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH--INIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .|+.|....+|+....       +..+++|+....    ....+..|+..|+.+..+  ..++++++++...+..++|||
T Consensus        43 ~l~gG~~n~~y~v~~~-------~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme  111 (312)
T 3jr1_A           43 KLYSGEMNEIWLINDE-------VQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE  111 (312)
T ss_dssp             EECCSSSSEEEEEESS-------SCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred             EeCCccceeeeEEEEC-------CCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence            6788999999987642       367888987542    245688999999888443  678889998888788999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      |+++..+.                           .    ..+.++...|+-||....
T Consensus       112 ~l~G~~~~---------------------------~----~~~~~lG~~LA~LH~~~~  138 (312)
T 3jr1_A          112 ALNKSKNK---------------------------Q----SSFTIFAEKIAQLHQIQG  138 (312)
T ss_dssp             CCCCCCCC---------------------------T----THHHHHHHHHHHHHHCCC
T ss_pred             eccCCCCC---------------------------c----hhHHHHHHHHHHHHcCCC
Confidence            99985421                           0    235678889999998753

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.42  E-value=0.095  Score=43.40  Aligned_cols=73  Identities=11%  Similarity=0.178  Sum_probs=40.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC-Ccccceee------eEEcCCcE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH-INIINLLG------VCTQDGPL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-~nIv~l~~------~~~~~~~~  145 (258)
                      .|+.|..+.||+....      . ..+++|+...  ...   .+..|..++..+..+ -.+.+++.      +....+..
T Consensus        39 ~l~gG~~n~~~~v~~~------~-~~~vlk~~~~--~~~---~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~  106 (346)
T 2q83_A           39 VIQGNQMALVWKVHTD------S-GAVCLKRIHR--PEK---KALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFL  106 (346)
T ss_dssp             ECC----CEEEEEEET------T-EEEEEEEECS--CHH---HHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEE
T ss_pred             eccccccCcEEEEEeC------C-CCEEEEecCC--CHH---HHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEE
Confidence            4556778899998764      2 3489999875  222   233455555544211 12334443      22345678


Q ss_pred             EEEEEeCCCCCH
Q psy12228        146 YVIVEFAPHGNL  157 (258)
Q Consensus       146 ~lv~e~~~~g~L  157 (258)
                      +++|||++|..+
T Consensus       107 ~~l~~~i~G~~~  118 (346)
T 2q83_A          107 FVVYDWIEGRPF  118 (346)
T ss_dssp             EEEEECCCCBCC
T ss_pred             EEEEEeecCccC
Confidence            899999998543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.36  E-value=0.013  Score=50.20  Aligned_cols=77  Identities=9%  Similarity=-0.043  Sum_probs=49.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC---h---HHHHHHHHHHHHHHHhcCC-Cc-ccceeeeEEcCCc
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS---D---AEMMDLVSEMEMMKMIGQH-IN-IINLLGVCTQDGP  144 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~---~~~~~~~~E~~~l~~l~~h-~n-Iv~l~~~~~~~~~  144 (258)
                      .||.|.++.||++...     ..+..++||.......   .   ....++..|.++++.+..+ +. +.+++.+  +.+.
T Consensus        37 ~lg~G~~n~vyrv~~~-----~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~  109 (397)
T 2olc_A           37 EIGDGNLNYVFHIYDQ-----EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEM  109 (397)
T ss_dssp             ECCSSSSEEEEEEEC---------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTT
T ss_pred             ECCCCceEEEEEEEEC-----CCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCc
Confidence            6899999999999764     2457899998753211   0   1124567899999888433 33 3455544  3445


Q ss_pred             EEEEEEeCCCCC
Q psy12228        145 LYVIVEFAPHGN  156 (258)
Q Consensus       145 ~~lv~e~~~~g~  156 (258)
                      .++|||++++..
T Consensus       110 ~~lvmE~l~g~~  121 (397)
T 2olc_A          110 AVTVMEDLSHLK  121 (397)
T ss_dssp             TEEEECCCTTSE
T ss_pred             cEEEEEeCCCcc
Confidence            689999998643

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.15  E-value=0.007  Score=51.04  Aligned_cols=124  Identities=9%  Similarity=0.039  Sum_probs=76.3

Q ss_pred             ee-eecCceEEEEEEEcccccCC-ceEEEEEEEecCCCC--hHHHHHHHHHHHHHHHhcCC--CcccceeeeEEcC---C
Q psy12228         73 VK-IKCAFGKVICAEANGILKQG-IITTVAVKMLKEGHS--DAEMMDLVSEMEMMKMIGQH--INIINLLGVCTQD---G  143 (258)
Q Consensus        73 ~i-g~G~fg~V~~~~~~~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h--~nIv~l~~~~~~~---~  143 (258)
                      .| +.|....+|+.......... .+..+++|.......  ......+.+|+.+++.+..+  -.+.++++++.+.   +
T Consensus        27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g  106 (357)
T 3ats_A           27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG  106 (357)
T ss_dssp             EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred             ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence            56 67888899987643000000 257889998754210  00013467888888888544  3567888887655   3


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK  207 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~  207 (258)
                      ..++|||+++|..+.+.+...-..           .....++..+...++.+++..|.-||+..
T Consensus       107 ~~~~v~e~l~G~~l~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~La~LH~~~  159 (357)
T 3ats_A          107 TPFFLMDYVEGVVPPDVMPYTFGD-----------NWFADAPAERQRQLQDATVAALATLHSIP  159 (357)
T ss_dssp             SCEEEEECCCCBCCCBTTBGGGSC-----------STTTTSCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             CceEEEEecCCCChhhcCcccccc-----------cccCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            568999999987765432110000           00001566777788899999999999754

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.48  E-value=0.13  Score=41.75  Aligned_cols=72  Identities=14%  Similarity=0.009  Sum_probs=50.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCC--cccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHI--NIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~--nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .+|.|..+.||+.+..      +|+.|.+|+-.... ......|..|+..|+.+....  .+++++++.    .-++|||
T Consensus        22 ~~g~G~~~~vyrv~l~------DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e   90 (288)
T 3f7w_A           22 ERGHSHRWHLYRVELA------DGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME   90 (288)
T ss_dssp             EEEEETTEEEEEEEET------TSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred             ecCCCCCeEEEEEEEC------CCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence            6899999999999874      67889999875432 222235788999999984432  344555542    2378999


Q ss_pred             eCCCC
Q psy12228        151 FAPHG  155 (258)
Q Consensus       151 ~~~~g  155 (258)
                      |++++
T Consensus        91 ~l~~~   95 (288)
T 3f7w_A           91 WVDER   95 (288)
T ss_dssp             CCCCC
T ss_pred             eeccc
Confidence            98763

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=91.53  E-value=0.015  Score=51.27  Aligned_cols=57  Identities=11%  Similarity=0.009  Sum_probs=14.8

Q ss_pred             ceEEEEEEEcccccCCceEEEEE------EEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc
Q psy12228         79 FGKVICAEANGILKQGIITTVAV------KMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ  141 (258)
Q Consensus        79 fg~V~~~~~~~~~~~~~~~~vav------K~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~  141 (258)
                      ||.||+|.+.     ....+||+      |.++... +.+....|.+|..++..+ +|||+++.+++...
T Consensus       152 fG~v~~g~~~-----~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~-~H~niv~~h~f~~~  215 (463)
T 3cxl_A          152 YTTLNREPAY-----KKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENE-QIPKYEKIHNFKVH  215 (463)
T ss_dssp             BCCC--------------CCBGGGC------------------------------------CBCCCEEEE
T ss_pred             chhhhccccc-----ccCCchhhhhccCccccccccccccccccccccccccccc-cccccCCCcceEEe
Confidence            9999999987     23357888      7765432 333446788999999999 99999999887753

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=90.63  E-value=0.26  Score=42.09  Aligned_cols=105  Identities=14%  Similarity=0.096  Sum_probs=60.6

Q ss_pred             eeeecCceEEEEEEEcccc--cCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGIL--KQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .|..|-...+|++...+..  ...++..+++|+....  ......+.+|..+++.+..+.-..++++++.+    .+|||
T Consensus        57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            3445667788888763100  0123468899986332  12234566899999888555444677776643    28999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      |++|.+|..    ..                  +..   ..+..+++..|+-||+..+
T Consensus       131 ~i~G~~l~~----~~------------------l~~---p~~~~~ia~~La~LH~~~~  163 (379)
T 3feg_A          131 YIPSRPLKT----QE------------------LRE---PVLSAAIATKMAQFHGMEM  163 (379)
T ss_dssp             CCSEEECCG----GG------------------GGC---HHHHHHHHHHHHHHHTCCC
T ss_pred             EecCccCCh----hH------------------hCC---HHHHHHHHHHHHHHhCCCC
Confidence            999854421    00                  111   2356778889999998643

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=90.35  E-value=1.4  Score=37.78  Aligned_cols=81  Identities=9%  Similarity=-0.107  Sum_probs=46.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCC---CCh-----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCc
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG---HSD-----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGP  144 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~---~~~-----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~  144 (258)
                      .||.|..+.||++..       .+..++||.....   ...     .....+..|+..+..-.....+.+++.+.  .+.
T Consensus        41 ~l~~G~~n~vyrv~~-------~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~  111 (420)
T 2pyw_A           41 EVGDGNLNFVFIVVG-------SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTM  111 (420)
T ss_dssp             ECCCSSSCEEEEEEC-------SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTT
T ss_pred             EccCCCcEEEEEEEc-------CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCc
Confidence            578899999999853       2367999943211   011     12233444443332211334566777765  456


Q ss_pred             EEEEEEeC-CCC-CHHHHHh
Q psy12228        145 LYVIVEFA-PHG-NLRDFLR  162 (258)
Q Consensus       145 ~~lv~e~~-~~g-~L~~~l~  162 (258)
                      .++|||++ ++. .+...+.
T Consensus       112 ~~lv~e~l~~g~~~l~~~l~  131 (420)
T 2pyw_A          112 ALIGMRYLEPPHIILRKGLI  131 (420)
T ss_dssp             TEEEECCCCTTCEEHHHHHH
T ss_pred             cEEEEeecCCcchhHHHHHh
Confidence            78999999 763 4444444

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=89.63  E-value=0.94  Score=39.18  Aligned_cols=103  Identities=11%  Similarity=0.123  Sum_probs=62.8

Q ss_pred             eeeecCceEEEEEEEccccc--CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILK--QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .|+.|-...+|++...+...  ...+..+++|+......   ...+.+|..++..+..+.-..++++.+.+    .+|+|
T Consensus        80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e  152 (429)
T 1nw1_A           80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  152 (429)
T ss_dssp             EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence            46677788999988642100  01246789998854212   13456899999988544434677776532    38999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK  207 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~  207 (258)
                      |++|.+|..-     .                 +.   ...++.++++.|.-||...
T Consensus       153 ~l~G~~l~~~-----~-----------------l~---~~~~~~~ia~~La~LH~~~  184 (429)
T 1nw1_A          153 YIPSRPLSCH-----E-----------------IS---LAHMSTKIAKRVAKVHQLE  184 (429)
T ss_dssp             CCCEEECCTT-----G-----------------GG---SHHHHHHHHHHHHHHTTCC
T ss_pred             EeCCcccChh-----h-----------------cC---CHHHHHHHHHHHHHHhCCc
Confidence            9986343210     0                 11   1235677888888888754

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=86.14  E-value=1.2  Score=38.92  Aligned_cols=100  Identities=12%  Similarity=0.071  Sum_probs=61.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .|+.|-...+|++...     ..+..+++|+..... ... -+..+|..++..+..+.-..++++++. +   .+||||+
T Consensus       115 ~lsgG~tN~~y~v~~~-----~~~~~~vLRi~g~~~-~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I  183 (458)
T 2qg7_A          115 IINGGITNILIKVKDM-----SKQAKYLIRLYGPKT-DEI-INREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFM  183 (458)
T ss_dssp             EECC--CEEEEEEEET-----TTTEEEEEEEECC-C-CSC-SCHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECC
T ss_pred             EcCCCeEeEEEEEEEC-----CCCceEEEEECCCCh-hhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEee
Confidence            4667778899998865     224678899875431 111 112479999999954443457777763 2   3599999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      ++.+|..     ..                 +..   ..++.+++..|.-||+...
T Consensus       184 ~G~~l~~-----~~-----------------l~~---~~~~~~ia~~La~LH~~~~  214 (458)
T 2qg7_A          184 DGYALSR-----ED-----------------IKN---PKFQKLIAKNLKLLHDIKL  214 (458)
T ss_dssp             CSEECCT-----TT-----------------TTS---HHHHHHHHHHHHHHHTCCC
T ss_pred             CCccCCh-----hh-----------------cCC---HHHHHHHHHHHHHHhcCCc
Confidence            9744321     00                 211   2457788999999998754

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=84.64  E-value=3.7  Score=33.51  Aligned_cols=75  Identities=7%  Similarity=0.027  Sum_probs=45.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC-Ccccceeee-----EEcCCcEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH-INIINLLGV-----CTQDGPLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-~nIv~l~~~-----~~~~~~~~  146 (258)
                      .++ |....||+....      ++..+++|.......  ....+..|..++..+..+ -.+++++..     ....+..+
T Consensus        33 ~l~-g~~n~~y~v~~~------~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~  103 (328)
T 1zyl_A           33 PLN-SYENRVYQFQDE------DRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYF  103 (328)
T ss_dssp             EEC-CSSSEEEEECCT------TCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEE
T ss_pred             eec-CcccceEEEEcC------CCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEE
Confidence            455 777789976543      345799999874311  123566788888777433 124444443     12244567


Q ss_pred             EEEEeCCCCC
Q psy12228        147 VIVEFAPHGN  156 (258)
Q Consensus       147 lv~e~~~~g~  156 (258)
                      ++|++++|..
T Consensus       104 ~l~~~i~G~~  113 (328)
T 1zyl_A          104 AVFPSVGGRQ  113 (328)
T ss_dssp             EEEECCCCEE
T ss_pred             EEEEecCCCC
Confidence            8999998743

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=84.54  E-value=2.5  Score=34.74  Aligned_cols=85  Identities=7%  Similarity=0.075  Sum_probs=49.9

Q ss_pred             eEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC-CcccceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCC
Q psy12228         96 ITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH-INIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPL  174 (258)
Q Consensus        96 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~  174 (258)
                      +..+++|.......    ..+..|+.++..+..+ -.+.+++.+....+  +++||++.+..+.+++....         
T Consensus        43 ~~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l~~~l~~~~---------  107 (333)
T 3csv_A           43 GAKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALFTEVINNDP---------  107 (333)
T ss_dssp             CCEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBHHHHHHHCG---------
T ss_pred             CCeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcchHHHhcCCC---------
Confidence            35677776543210    2244567777666333 23556676643333  68999998878877775422         


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q psy12228        175 GSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK  207 (258)
Q Consensus       175 ~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~  207 (258)
                               ...   ...+.+++..|.-||...
T Consensus       108 ---------~~~---~~~~~~~~~~La~lH~~~  128 (333)
T 3csv_A          108 ---------AQE---MPLYRAAVDLLIHLHDAQ  128 (333)
T ss_dssp             ---------GGH---HHHHHHHHHHHHHHHTSC
T ss_pred             ---------ccH---HHHHHHHHHHHHHHhcCC
Confidence                     111   345566777777777653

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=82.13  E-value=3.1  Score=33.68  Aligned_cols=69  Identities=9%  Similarity=0.087  Sum_probs=40.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .|+.|....+|+.  .         .+++|+.... ... .....+|+.+++.+..+.-..++++.+  .+.-++++||+
T Consensus        25 ~l~gG~tN~~~~~--~---------~~vlR~~~~~-~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i   89 (301)
T 3dxq_A           25 ERLGGLTNLVFRA--G---------DLCLRIPGKG-TEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYI   89 (301)
T ss_dssp             EEESCSSEEEEEE--T---------TEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECC
T ss_pred             EcCCcccccccee--e---------eEEEECCCCC-ccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeec
Confidence            5778888899987  2         3778877643 111 112346777777774332224566543  33347899999


Q ss_pred             -CCCC
Q psy12228        153 -PHGN  156 (258)
Q Consensus       153 -~~g~  156 (258)
                       ++.+
T Consensus        90 ~~g~~   94 (301)
T 3dxq_A           90 AGAQT   94 (301)
T ss_dssp             TTCEE
T ss_pred             CCCcc
Confidence             5533

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	258
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	9e-30
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-29
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-27
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-24
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-24
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-21
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-21
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-21
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-18
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-17
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-17
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-17
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	8e-17
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-17
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-16
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-16
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-16
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-16
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-16
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-16
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-15
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-15
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-15
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-15
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-15
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	6e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-14
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-14
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-14
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	9e-14
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-13
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-13
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-13
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-12
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-10
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-10
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-10
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-10
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-10
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-10
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-10
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-08
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-06

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 9e-30
 Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 5/147 (3%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
                    K     AFGKV+ A A G++K     TVAVKMLK      E   L+SE+++
Sbjct: 20  FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 79

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           +  +G H+NI+NLLG CT  GP  VI E+  +G+L +FLR+ R S        +   +  
Sbjct: 80  LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139

Query: 183 V-LTEKDLISFAYQVANGMHYLQSRKV 208
           + L  +DL+SF+YQVA GM +L S+  
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNC 166

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 8e-29
 Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 10/152 (6%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
              +     K     AFGKV+ A A GI K G+   VAVKMLKE    +E   L+SE++M
Sbjct: 34  FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 93

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPS------SGYESPLGS 176
           M  +G H NI+NLLG CT  GP+Y+I E+  +G+L ++LR  R                 
Sbjct: 94  MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 153

Query: 177 AYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
              + NVLT +DL+ FAYQVA GM +L+ +  
Sbjct: 154 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 185

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 3e-27
 Identities = 77/148 (52%), Positives = 97/148 (65%), Gaps = 7/148 (4%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGI--ITTVAVKMLKEGHSDAEMMDLVSEM 120
           +     V  K     AFG+V+ AEA G+ K     +T VAVKMLK   ++ ++ DL+SEM
Sbjct: 10  LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 69

Query: 121 EMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTN 180
           EMMKMIG+H NIINLLG CTQDGPLYVIVE+A  GNLR++L+  RP  G E     ++  
Sbjct: 70  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP-PGLEYSYNPSHNP 128

Query: 181 GNVLTEKDLISFAYQVANGMHYLQSRKV 208
              L+ KDL+S AYQVA GM YL S+K 
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKC 156

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.2 bits (241), Expect = 2e-24
 Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 4/131 (3%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V+ A    I K G+    A+K +KE  S  +  D   E+E++  +G H NIINLLG
Sbjct: 22  NFGQVLKAR---IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG 78

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
            C   G LY+ +E+APHGNL DFLRK R     +     A +  + L+ + L+ FA  VA
Sbjct: 79  ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET-DPAFAIANSTASTLSSQQLLHFAADVA 137

Query: 198 NGMHYLQSRKV 208
            GM YL  ++ 
Sbjct: 138 RGMDYLSQKQF 148

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.9 bits (235), Expect = 9e-24
 Identities = 62/147 (42%), Positives = 84/147 (57%), Gaps = 6/147 (4%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
                    K     AFG+VI A+A GI K     TVAVKMLKEG + +E   L+SE+++
Sbjct: 10  FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 69

Query: 123 MKMIGQHINIINLLGVCTQDG-PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNG 181
           +  IG H+N++NLLG CT+ G PL VIVEF   GNL  +LR  R +      +       
Sbjct: 70  LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-NEFVPYKVAPEDLYK 128

Query: 182 NVLTEKDLISFAYQVANGMHYLQSRKV 208
           + LT + LI +++QVA GM +L SRK 
Sbjct: 129 DFLTLEHLICYSFQVAKGMEFLASRKC 155

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 1e-21
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 12/146 (8%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
           +  ++    +     +FG V    A G++K    T VA+K + E  S  E ++ ++E  +
Sbjct: 17  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 76

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           MK      +++ LLGV +Q  P  VI+E    G+L+ +LR  RP+      L        
Sbjct: 77  MKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP------ 129

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
             +   +I  A ++A+GM YL + K 
Sbjct: 130 -PSLSKMIQMAGEIADGMAYLNANKF 154

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 2e-21
 Identities = 48/206 (23%), Positives = 78/206 (37%), Gaps = 44/206 (21%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
           +N +E   ++      FG V+  +  G         VAVK +K   +DA     ++E  +
Sbjct: 4   LNMKELKLLQTIGKGEFGDVMLGDYRG-------NKVAVKCIK---NDATAQAFLAEASV 53

Query: 123 MKMIGQHINIINLLGVCTQD-GPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNG 181
           M  + +H N++ LLGV  ++ G LY++ E+   G+L D+LR    S              
Sbjct: 54  MTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-------------- 98

Query: 182 NVLTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHD 228
            VL    L+ F+  V   M YL+                  ++  +   F L        
Sbjct: 99  -VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 157

Query: 229 STLLKTTSTIASLILRNQKVSVLLDL 254
            T        A   LR +K S   D+
Sbjct: 158 DTGKLPVKWTAPEALREKKFSTKSDV 183

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.6 bits (216), Expect = 5e-21
 Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 21/178 (11%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG+V  A A G+L     T VAVKMLKE  S     D   E  +M     + NI+ LLG
Sbjct: 25  AFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLG 83

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYT-------NGNVLTEKDLI 190
           VC    P+ ++ E+  +G+L +FLR   P +          T           L+  + +
Sbjct: 84  VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQL 143

Query: 191 SFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDSTLLKTT 235
             A QVA GM YL  RK               N  V+   F L   ++  D       
Sbjct: 144 CIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN 201

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.7 bits (201), Expect = 6e-19
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 21/131 (16%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V         KQ     VA+K+LK+G   A+  +++ E ++M  +  +  I+ L+G
Sbjct: 21  NFGSVRQGVYRMRKKQ---IDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIG 76

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           VC Q   L +++E A  G L  FL   R                  +   ++    +QV+
Sbjct: 77  VC-QAEALMLVMEMAGGGPLHKFLVGKREE----------------IPVSNVAELLHQVS 119

Query: 198 NGMHYLQSRKV 208
            GM YL+ +  
Sbjct: 120 MGMKYLEEKNF 130

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 2e-18
 Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 29/146 (19%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
           +  +    ++      FG+V      G       T VAVK LK+G    +    ++E  +
Sbjct: 10  VPRETLKLVERLGAGQFGEVWM----GYYNGH--TKVAVKSLKQGSMSPD--AFLAEANL 61

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           MK + QH  ++ L  V T   P+Y+I E+  +G+L DFL+                  G 
Sbjct: 62  MKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPS---------------GI 104

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
            LT   L+  A Q+A GM +++ R  
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNY 130

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 6e-18
 Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 31/147 (21%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM-DLVSEME 121
           I   +    +     +FG V   + +G         VAVKML       + +    +E+ 
Sbjct: 5   IPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVG 56

Query: 122 MMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNG 181
           +++   +H+NI+  +G  T    L ++ ++    +L   L                    
Sbjct: 57  VLRKT-RHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETK-------------- 100

Query: 182 NVLTEKDLISFAYQVANGMHYLQSRKV 208
                  LI  A Q A GM YL ++ +
Sbjct: 101 --FEMIKLIDIARQTAQGMDYLHAKSI 125

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (190), Expect = 2e-17
 Identities = 49/193 (25%), Positives = 74/193 (38%), Gaps = 39/193 (20%)

Query: 63  LTVTINSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDL 116
           LT  I  ++   ++     +FG V   E +    + +   VAVK LK         M D 
Sbjct: 1   LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDF 58

Query: 117 VSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGS 176
           + E+  M  +  H N+I L GV     P+ ++ E AP G+L D LRKH+           
Sbjct: 59  IREVNAMHSL-DHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGH--------- 107

Query: 177 AYTNGNVLTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLCIL 223
                       L  +A QVA GM YL+S++                D V+   F L   
Sbjct: 108 -------FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 160

Query: 224 VFFHDSTLLKTTS 236
           +  +D   +    
Sbjct: 161 LPQNDDHYVMQEH 173

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.8 bits (191), Expect = 2e-17
 Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 23/131 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AF +VI AE      +     VA+K + +   + +   + +E+ ++  I +H NI+ L  
Sbjct: 21  AFSEVILAE-----DKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KHPNIVALDD 74

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           +    G LY+I++    G L D + +                     TE+D     +QV 
Sbjct: 75  IYESGGHLYLIMQLVSGGELFDRIVEKGF-----------------YTERDASRLIFQVL 117

Query: 198 NGMHYLQSRKV 208
           + + YL    +
Sbjct: 118 DAVKYLHDLGI 128

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 5e-17
 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 29/146 (19%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
           I+ ++   +K      FG V   +     +      VA+KM+KEG    +  + + E ++
Sbjct: 1   IDPKDLTFLKELGTGQFGVVKYGK----WRGQ--YDVAIKMIKEGSMSED--EFIEEAKV 52

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           M  +  H  ++ L GVCT+  P+++I E+  +G L ++LR+ R                 
Sbjct: 53  MMNL-SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--------------- 96

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
               + L+     V   M YL+S++ 
Sbjct: 97  -FQTQQLLEMCKDVCEAMEYLESKQF 121

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.2 bits (187), Expect = 8e-17
 Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 25/133 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLK--EGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           +FG V  A     ++      VA+K +      S+ +  D++ E+  ++ + +H N I  
Sbjct: 27  SFGAVYFARD---VRNS--EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQY 80

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            G   ++   ++++E+             +P                 L E ++ +  + 
Sbjct: 81  RGCYLREHTAWLVMEYCLGSASDLLEVHKKP-----------------LQEVEIAAVTHG 123

Query: 196 VANGMHYLQSRKV 208
              G+ YL S  +
Sbjct: 124 ALQGLAYLHSHNM 136

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 9e-17
 Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 23/132 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMD-LVSEMEMMKMIGQHINIINLL 136
            FG V          + ++ TVAVK+LK   +D  + D L++E  +M+ +  +  I+ ++
Sbjct: 19  NFGTVKKGYYQM---KKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMI 74

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           G+C  +    +++E A  G L  +L+++R                  + +K++I   +QV
Sbjct: 75  GICEAE-SWMLVMEMAELGPLNKYLQQNRH-----------------VKDKNIIELVHQV 116

Query: 197 ANGMHYLQSRKV 208
           + GM YL+    
Sbjct: 117 SMGMKYLEESNF 128

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 1e-16
 Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 29/146 (19%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
           I+  E   ++      FG V      G         VA+K ++EG    E  D + E E+
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHL----GYWLNK--DKVAIKTIREGAMSEE--DFIEEAEV 53

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           M  +  H  ++ L GVC +  P+ ++ EF  HG L D+LR  R                 
Sbjct: 54  MMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR----------------G 96

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
           +   + L+     V  GM YL+   V
Sbjct: 97  LFAAETLLGMCLDVCEGMAYLEEACV 122

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.2 bits (184), Expect = 2e-16
 Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 19/131 (14%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG+V         K+ I   VA+K LK G+++ +  D +SE  +M     H N+I+L G
Sbjct: 38  EFGEVCSGHLKLPGKREIF--VAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNVIHLEG 94

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
           V T+  P+ +I EF  +G+L  FLR++                    T   L+     +A
Sbjct: 95  VVTKSTPVMIITEFMENGSLDSFLRQNDGQF----------------TVIQLVGMLRGIA 138

Query: 198 NGMHYLQSRKV 208
            GM YL     
Sbjct: 139 AGMKYLADMNY 149

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 2e-16
 Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 23/129 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
             G V           G++  +A K++      A    ++ E++++        I+   G
Sbjct: 18  NGGVVFKVS---HKPSGLV--MARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYG 71

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
               DG + + +E    G+L   L+K                    + E+ L   +  V 
Sbjct: 72  AFYSDGEISICMEHMDGGSLDQVLKKAGR-----------------IPEQILGKVSIAVI 114

Query: 198 NGMHYLQSR 206
            G+ YL+ +
Sbjct: 115 KGLTYLREK 123

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 75.1 bits (184), Expect = 2e-16
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 27/133 (20%)

Query: 78  AFGKVICAE--ANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINL 135
           AFG V      A G            K +   +   +   + +E+ +M  +  H  +INL
Sbjct: 41  AFGVVHRCVEKATG-------RVFVAKFINTPYPL-DKYTVKNEISIMNQL-HHPKLINL 91

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
                    + +I+EF   G L D +                      ++E ++I++  Q
Sbjct: 92  HDAFEDKYEMVLILEFLSGGELFDRIAAE----------------DYKMSEAEVINYMRQ 135

Query: 196 VANGMHYLQSRKV 208
              G+ ++    +
Sbjct: 136 ACEGLKHMHEHSI 148

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 3e-16
 Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 24/146 (16%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
           I  +     +C     FG V            +   VA+K  K   SD+     + E   
Sbjct: 4   IQRERIELGRCIGEGQFGDVHQGIYMSPENPALA--VAIKTCKNCTSDSVREKFLQEALT 61

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           M+    H +I+ L+GV T + P+++I+E    G LR FL+  + S               
Sbjct: 62  MRQF-DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYS--------------- 104

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
            L    LI +AYQ++  + YL+S++ 
Sbjct: 105 -LDLASLILYAYQLSTALAYLESKRF 129

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 3e-16
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 23/131 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFGKV  A+     +  ++   A K++    S+ E+ D + E++++     H NI+ LL 
Sbjct: 24  AFGKVYKAQN---KETSVL--AAAKVIDT-KSEEELEDYMVEIDILASC-DHPNIVKLLD 76

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
               +  L++++EF   G +   + +                    LTE  +     Q  
Sbjct: 77  AFYYENNLWILIEFCAGGAVDAVMLEL----------------ERPLTESQIQVVCKQTL 120

Query: 198 NGMHYLQSRKV 208
           + ++YL   K+
Sbjct: 121 DALNYLHDNKI 131

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 5e-16
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 36/171 (21%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           A+G+V  A       +     VAVK++    +     ++  E+ + KM+  H N++   G
Sbjct: 17  AYGEVQLAV-----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYG 70

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
              +    Y+ +E+   G L D +                      + E D   F +Q+ 
Sbjct: 71  HRREGNIQYLFLEYCSGGELFDRIEPDIG-----------------MPEPDAQRFFHQLM 113

Query: 198 NGMHYLQSRKV-------------GNDAVRFIGFDLCILVFFHDSTLLKTT 235
            G+ YL    +               D ++   F L  +  +++   L   
Sbjct: 114 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.2 bits (179), Expect = 1e-15
 Identities = 22/145 (15%), Positives = 54/145 (37%), Gaps = 28/145 (19%)

Query: 70  QEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEG--HSDAEMMDLVSEMEMM 123
           ++++  K     +FGKV  AE     +       A+K LK+     D ++   + E  ++
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQF-----FAIKALKKDVVLMDDDVECTMVEKRVL 56

Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
            +  +H  + ++         L+ ++E+   G+L   ++                     
Sbjct: 57  SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----------------- 99

Query: 184 LTEKDLISFAYQVANGMHYLQSRKV 208
                   +A ++  G+ +L S+ +
Sbjct: 100 FDLSRATFYAAEIILGLQFLHSKGI 124

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 73.2 bits (179), Expect = 1e-15
 Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 23/131 (17%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           AFG V         ++      A K +   H +++   +  E++ M ++ +H  ++NL  
Sbjct: 38  AFGVVHRVT-----ERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVL-RHPTLVNLHD 90

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
               D  + +I EF   G L + +                    N ++E + + +  QV 
Sbjct: 91  AFEDDNEMVMIYEFMSGGELFEKVADEH----------------NKMSEDEAVEYMRQVC 134

Query: 198 NGMHYLQSRKV 208
            G+ ++     
Sbjct: 135 KGLCHMHENNY 145

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 4e-15
 Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 22/149 (14%)

Query: 64  TVTINSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSE 119
           T  I+     + K      FG+V                VA+K LK G+++ + +D + E
Sbjct: 1   TTEIHPSCVTRQKVIGAGEFGEVYKGMLKT-SSGKKEVPVAIKTLKAGYTEKQRVDFLGE 59

Query: 120 MEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYT 179
             +M     H NII L GV ++  P+ +I E+  +G L  FLR+                
Sbjct: 60  AGIMGQF-SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG------------- 105

Query: 180 NGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                +   L+     +A GM YL +   
Sbjct: 106 ---EFSVLQLVGMLRGIAAGMKYLANMNY 131

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 5e-15
 Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 24/131 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V         K     T   K +K   +D  +  +  E+ ++ +  +H NI++L  
Sbjct: 17  EFGIVHRCVETSSKK-----TYMAKFVKVKGTDQVL--VKKEISILNIA-RHRNILHLHE 68

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
                  L +I EF    ++ + +                      L E++++S+ +QV 
Sbjct: 69  SFESMEELVMIFEFISGLDIFERINTS----------------AFELNEREIVSYVHQVC 112

Query: 198 NGMHYLQSRKV 208
             + +L S  +
Sbjct: 113 EALQFLHSHNI 123

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (172), Expect = 6e-15
 Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 25/133 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM--DLVSEMEMMKMIGQHINIINL 135
            FG V  A      ++     +A+K+L +   +   +   L  E+E+   + +H NI+ L
Sbjct: 18  KFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRL 71

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
            G       +Y+I+E+AP G +   L+K                      E+   ++  +
Sbjct: 72  YGYFHDATRVYLILEYAPLGTVYRELQKLSK-----------------FDEQRTATYITE 114

Query: 196 VANGMHYLQSRKV 208
           +AN + Y  S++V
Sbjct: 115 LANALSYCHSKRV 127

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 70.5 bits (172), Expect = 6e-15
 Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 27/146 (18%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
           +   +           +G+V          +    TVAVK LKE   + E  + + E  +
Sbjct: 14  MERTDITMKHKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTMEVE--EFLKEAAV 66

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           MK I +H N++ LLGVCT++ P Y+I EF  +GNL D+LR+                   
Sbjct: 67  MKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------------- 111

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
            ++   L+  A Q+++ M YL+ +  
Sbjct: 112 -VSAVVLLYMATQISSAMEYLEKKNF 136

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.6 bits (170), Expect = 1e-14
 Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 26/150 (17%)

Query: 71  EYVKIKC----AFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKM 125
           +Y  +      ++G+          ++     +  K L     ++AE   LVSE+ +++ 
Sbjct: 5   DYEVLYTIGTGSYGRCQKIR-----RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 59

Query: 126 IGQHINIINLLGVCT--QDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
           + +H NI+          +  LY+++E+   G+L   + K      Y             
Sbjct: 60  L-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY------------- 105

Query: 184 LTEKDLISFAYQVANGMHYLQSRKVGNDAV 213
           L E+ ++    Q+   +     R  G   V
Sbjct: 106 LDEEFVLRVMTQLTLALKECHRRSDGGHTV 135

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.2 bits (169), Expect = 2e-14
 Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 42/197 (21%)

Query: 59  LINVLTVTINSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM 114
           L ++++V    ++Y + +     A G V  A     +  G    VA++ +       +  
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMD---VATG--QEVAIRQMNL-QQQPKKE 62

Query: 115 DLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPL 174
            +++E+ +M+   ++ NI+N L        L+V++E+   G+L D + +           
Sbjct: 63  LIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD------- 114

Query: 175 GSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV-------------GNDAVRFIGFDLC 221
                      E  + +   +    + +L S +V              + +V+   F  C
Sbjct: 115 -----------EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163

Query: 222 ILVFFHDSTLLKTTSTI 238
             +    S       T 
Sbjct: 164 AQITPEQSKRSTMVGTP 180

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 3e-14
 Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 34/144 (23%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG-QHINIINLL 136
            FG+V   +  G         VAVK+        E      E E+ + +  +H NI+  +
Sbjct: 15  RFGEVWRGKWRG-------EEVAVKIFS----SREERSWFREAEIYQTVMLRHENILGFI 63

Query: 137 GVCTQDGP----LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
               +D      L+++ ++  HG+L D+L ++                   +T + +I  
Sbjct: 64  AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT------------------VTVEGMIKL 105

Query: 193 AYQVANGMHYLQSRKVGNDAVRFI 216
           A   A+G+ +L    VG      I
Sbjct: 106 ALSTASGLAHLHMEIVGTQGKPAI 129

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 5e-14
 Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 25/133 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINL 135
           +F  V+ A      ++      A+K+L++ H   + ++  +  E ++M  +  H   + L
Sbjct: 20  SFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKL 73

Query: 136 LGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQ 195
                 D  LY  + +A +G L  ++RK                      E     +  +
Sbjct: 74  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----------------FDETCTRFYTAE 116

Query: 196 VANGMHYLQSRKV 208
           + + + YL  + +
Sbjct: 117 IVSALEYLHGKGI 129

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 7e-14
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 23/146 (15%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
           +   E+ KIK     AFG V          + +   VA+K L+E  S     +++ E  +
Sbjct: 6   LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYV 64

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           M  +  + ++  LLG+C     + +I +  P G L D++R+H+ +               
Sbjct: 65  MASV-DNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNI-------------- 108

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
               + L+++  Q+A GM+YL+ R++
Sbjct: 109 --GSQYLLNWCVQIAKGMNYLEDRRL 132

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 9e-14
 Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 30/135 (22%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
             GKV+         +      A+KML++            E+E+     Q  +I+ ++ 
Sbjct: 24  INGKVLQIF-----NKRTQEKFALKMLQDCP------KARREVELHWRASQCPHIVRIVD 72

Query: 138 VC----TQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
           V          L +++E    G L   ++                      TE++     
Sbjct: 73  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGD---------------QAFTEREASEIM 117

Query: 194 YQVANGMHYLQSRKV 208
             +   + YL S  +
Sbjct: 118 KSIGEAIQYLHSINI 132

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 66.3 bits (161), Expect = 2e-13
 Identities = 21/139 (15%), Positives = 42/139 (30%), Gaps = 29/139 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMM--DLVSEMEMMKMIGQHINIINL 135
              +V  A     L+      VAVK+L+   +           E +    +  H  I+ +
Sbjct: 19  GMSEVHLARD---LRLH--RDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAV 72

Query: 136 LGVCTQDGP----LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLIS 191
                 + P     Y+++E+     LRD +    P                 +T K  I 
Sbjct: 73  YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----------------MTPKRAIE 115

Query: 192 FAYQVANGMHYLQSRKVGN 210
                   +++     + +
Sbjct: 116 VIADACQALNFSHQNGIIH 134

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 5e-13
 Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 29/146 (19%)

Query: 67  INSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEM 122
           I  +            FG+V      G       T VA+K LK G    E    + E ++
Sbjct: 14  IPRESLRLEVKLGQGCFGEVWM----GTWNGT--TRVAIKTLKPGTMSPE--AFLQEAQV 65

Query: 123 MKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGN 182
           MK + +H  ++ L  V +++ P+Y++ E+   G+L DFL+                    
Sbjct: 66  MKKL-RHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLR------------ 111

Query: 183 VLTEKDLISFAYQVANGMHYLQSRKV 208
                 L+  A Q+A+GM Y++    
Sbjct: 112 ---LPQLVDMAAQIASGMAYVERMNY 134

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 5e-13
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 20/132 (15%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
            FG V       +   G     AVK L       E+   ++E  +MK    H N+++LLG
Sbjct: 39  HFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLG 95

Query: 138 VCTQ-DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
           +C + +G   V++ +  HG+LR+F+R    +                 T KDLI F  QV
Sbjct: 96  ICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----------------PTVKDLIGFGLQV 139

Query: 197 ANGMHYLQSRKV 208
           A GM +L S+K 
Sbjct: 140 AKGMKFLASKKF 151

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 64.7 bits (157), Expect = 6e-13
 Identities = 19/139 (13%), Positives = 43/139 (30%), Gaps = 30/139 (21%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMD--------LVSEMEMMKMIGQH 129
               V         K+      AVK++      +   +         + E+++++ +  H
Sbjct: 15  VSSVVRRCIHKPTCKE-----YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 69

Query: 130 INIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDL 189
            NII L      +   +++ +    G L D+L +                    L+EK+ 
Sbjct: 70  PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-----------------LSEKET 112

Query: 190 ISFAYQVANGMHYLQSRKV 208
                 +   +  L    +
Sbjct: 113 RKIMRALLEVICALHKLNI 131

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 1e-12
 Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 28/137 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           +F  V          +     VA   L     + +E      E EM+K + QH NI+   
Sbjct: 21  SFKTVYKGLDTETTVE-----VAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFY 74

Query: 137 GVC----TQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
                       + ++ E    G L+ +L++ +                  +  K L S+
Sbjct: 75  DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV-----------------MKIKVLRSW 117

Query: 193 AYQVANGMHYLQSRKVG 209
             Q+  G+ +L +R   
Sbjct: 118 CRQILKGLQFLHTRTPP 134

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 60.5 bits (146), Expect = 3e-11
 Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 28/149 (18%)

Query: 66  TINSQEYVKI--KCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMD--LVSEME 121
           T+N     +I  +  FG+V         K       A+K L +     +  +   ++E  
Sbjct: 2   TMNDFSVHRIIGRGGFGEVYGCRKADTGKM-----YAMKCLDKKRIKMKQGETLALNERI 56

Query: 122 MMKMI--GQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYT 179
           M+ ++  G    I+ +         L  I++    G+L   L +H               
Sbjct: 57  MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF------------ 104

Query: 180 NGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                +E D+  +A ++  G+ ++ +R V
Sbjct: 105 -----SEADMRFYAAEIILGLEHMHNRFV 128

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 57.6 bits (138), Expect = 2e-10
 Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 25/132 (18%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMD-LVSEMEMMKMIGQHINIINLL 136
            +G V  A+       G   T A+K ++    D  +    + E+ ++K + +H NI+ L 
Sbjct: 14  TYGVVYKAQ----NNYG--ETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLY 66

Query: 137 GVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQV 196
            V      L ++ E       +                         L      SF  Q+
Sbjct: 67  DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-----------------LESVTAKSFLLQL 109

Query: 197 ANGMHYLQSRKV 208
            NG+ Y   R+V
Sbjct: 110 LNGIAYCHDRRV 121

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.2 bits (137), Expect = 3e-10
 Identities = 18/131 (13%), Positives = 42/131 (32%), Gaps = 25/131 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG +        +  G    VA+K+        ++     E ++ KM+   + I  +  
Sbjct: 19  SFGDIYLGTD---IAAG--EEVAIKLECVKTKHPQLH---IESKIYKMMQGGVGIPTIRW 70

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
              +     +++E         F    R                   + K ++  A Q+ 
Sbjct: 71  CGAEGDYNVMVMELLGPSLEDLFNFCSRK-----------------FSLKTVLLLADQMI 113

Query: 198 NGMHYLQSRKV 208
           + + Y+ S+  
Sbjct: 114 SRIEYIHSKNF 124

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 4e-10
 Identities = 24/137 (17%), Positives = 48/137 (35%), Gaps = 31/137 (22%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG V  A+   +   G    VA+K + +     +      E+++M+ +  H NI+ L  
Sbjct: 32  SFGVVYQAK---LCDSG--ELVAIKKVLQ-----DKRFKNRELQIMRKL-DHCNIVRLRY 80

Query: 138 VCTQDGP------LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLIS 191
                G       L +++++ P    R      R                  L    +  
Sbjct: 81  FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR--------------AKQTLPVIYVKL 126

Query: 192 FAYQVANGMHYLQSRKV 208
           + YQ+   + Y+ S  +
Sbjct: 127 YMYQLFRSLAYIHSFGI 143

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 56.8 bits (136), Expect = 4e-10
 Identities = 21/149 (14%), Positives = 51/149 (34%), Gaps = 35/149 (23%)

Query: 68  NSQEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMM 123
           N  +Y  ++      + +V  A     +       V VK+LK      +   +  E++++
Sbjct: 33  NQDDYQLVRKLGRGKYSEVFEAIN---ITNN--EKVVVKILKP----VKKKKIKREIKIL 83

Query: 124 KMIGQHINIINLLGVCTQ--DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNG 181
           + +    NII L  +          ++ E   + + +   +                   
Sbjct: 84  ENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT------------------ 125

Query: 182 NVLTEKDLISFAYQVANGMHYLQSRKVGN 210
             LT+ D+  + Y++   + Y  S  + +
Sbjct: 126 --LTDYDIRFYMYEILKALDYCHSMGIMH 152

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 5e-10
 Identities = 24/138 (17%), Positives = 46/138 (33%), Gaps = 29/138 (21%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLK-----EGHSDAEMMDLVSEMEMMKMI-GQHIN 131
            FG V        +       VA+K ++     +         +  E+ ++K +      
Sbjct: 16  GFGSVYSGIR---VSDN--LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 132 IINLLGVCTQDGPLYVIVEFA-PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLI 190
           +I LL    +     +I+E   P  +L DF+ +                    L E+   
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-----------------LQEELAR 113

Query: 191 SFAYQVANGMHYLQSRKV 208
           SF +QV   + +  +  V
Sbjct: 114 SFFWQVLEAVRHCHNCGV 131

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 5e-10
 Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 27/135 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGH----SDAEMMDLVSEMEMMKMIGQHINII 133
            F  V  A       +     VA+K +K GH     D      + E+++++ +  H NII
Sbjct: 10  QFATVYKAR-----DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNII 63

Query: 134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
            LL        + ++ +F                                LT   + ++ 
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLV-----------------LTPSHIKAYM 106

Query: 194 YQVANGMHYLQSRKV 208
                G+ YL    +
Sbjct: 107 LMTLQGLEYLHQHWI 121

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 6e-10
 Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 28/135 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           A+G V  A  N    +     VA+K +            + E++++    +H NII +  
Sbjct: 20  AYGMVCSAYDNVNKVR-----VAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGIND 73

Query: 138 VC----TQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFA 193
           +      +      +V      +L   L+                     L+   +  F 
Sbjct: 74  IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH------------------LSNDHICYFL 115

Query: 194 YQVANGMHYLQSRKV 208
           YQ+  G+ Y+ S  V
Sbjct: 116 YQILRGLKYIHSANV 130

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 6e-10
 Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 37/157 (23%)

Query: 66  TINSQE-----YVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAE---- 112
           T+  QE     Y   +      F  V          Q      A K +K+  + +     
Sbjct: 1   TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQ-----YAAKFIKKRRTKSSRRGV 55

Query: 113 -MMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYE 171
              D+  E+ ++K I QH N+I L  V      + +I+E    G L DFL +        
Sbjct: 56  SREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----- 109

Query: 172 SPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                       LTE++   F  Q+ NG++YL S ++
Sbjct: 110 ------------LTEEEATEFLKQILNGVYYLHSLQI 134

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 6e-10
 Identities = 32/135 (23%), Positives = 49/135 (36%), Gaps = 28/135 (20%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           A+G V  A  +G         VA+K L +   S+        E+ ++K + +H N+I LL
Sbjct: 30  AYGAVCSAV-DGRTGA----KVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLL 83

Query: 137 GVCTQDGPLYVIVEFA----PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISF 192
            V T D  L    +F       G     L KH                   L E  +   
Sbjct: 84  DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK-----------------LGEDRIQFL 126

Query: 193 AYQVANGMHYLQSRK 207
            YQ+  G+ Y+ +  
Sbjct: 127 VYQMLKGLRYIHAAG 141

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.0 bits (124), Expect = 2e-08
 Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 29/145 (20%)

Query: 70  QEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMM 123
           Q++  ++     +FG+V    +      G     A+K+LK+       ++     E  M+
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRS---RHNG--RYYAMKVLKKEIVVRLKQVEHTNDERLML 58

Query: 124 KMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNV 183
            ++  H  II + G       +++I+++   G L   LRK +                  
Sbjct: 59  SIV-THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP--------------- 102

Query: 184 LTEKDLISFAYQVANGMHYLQSRKV 208
                   +A +V   + YL S+ +
Sbjct: 103 --NPVAKFYAAEVCLALEYLHSKDI 125

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.2 bits (119), Expect = 8e-08
 Identities = 22/149 (14%), Positives = 55/149 (36%), Gaps = 27/149 (18%)

Query: 64  TVTINSQEYVKI--KCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSE 119
           T  ++  + +K     +FG+V+  +      +      A+K+L +       ++   ++E
Sbjct: 37  TAQLDQFDRIKTLGTGSFGRVMLVK-----HKESGNHYAMKILDKQKVVKLKQIEHTLNE 91

Query: 120 MEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYT 179
             +++ +     ++ L      +  LY+++E+   G +   LR+                
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------------- 137

Query: 180 NGNVLTEKDLISFAYQVANGMHYLQSRKV 208
                +E     +A Q+     YL S  +
Sbjct: 138 ----FSEPHARFYAAQIVLTFEYLHSLDL 162

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 49.4 bits (117), Expect = 1e-07
 Identities = 15/131 (11%), Positives = 35/131 (26%), Gaps = 25/131 (19%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLG 137
           +FG +        L       VA+K         ++ D   E    K++     I N+  
Sbjct: 17  SFGVIFEGTN---LLNN--QQVAIKFEPRRSDAPQLRD---EYRTYKLLAGCTGIPNVYY 68

Query: 138 VCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVA 197
              +     ++++              R                   + K +   A Q+ 
Sbjct: 69  FGQEGLHNVLVIDLLGPSLEDLLDLCGRK-----------------FSVKTVAMAAKQML 111

Query: 198 NGMHYLQSRKV 208
             +  +  + +
Sbjct: 112 ARVQSIHEKSL 122

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 6e-07
 Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 30/136 (22%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           A+G V  A      K G    VAVK L +   S         E+ ++K + +H N+I LL
Sbjct: 30  AYGSVCAAF---DTKTG--LRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLL 83

Query: 137 GVCT-----QDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLIS 191
            V T     ++     +V      +L + ++  +                  LT+  +  
Sbjct: 84  DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------------------LTDDHVQF 125

Query: 192 FAYQVANGMHYLQSRK 207
             YQ+  G+ Y+ S  
Sbjct: 126 LIYQILRGLKYIHSAD 141

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 2e-06
 Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 28/144 (19%)

Query: 70  QEYVKIKC----AFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMD-LVSEMEMMK 124
           Q+Y K++      +G V  A+     +      VA+K ++    D  +    + E+ ++K
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEI-----VALKRVRLDDDDEGVPSSALREICLLK 56

Query: 125 MIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVL 184
            + +H NI+ L  V   D  L ++ EF      + F   +                    
Sbjct: 57  EL-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL----------------- 98

Query: 185 TEKDLISFAYQVANGMHYLQSRKV 208
             + + SF +Q+  G+ +  SR V
Sbjct: 99  DPEIVKSFLFQLLKGLGFCHSRNV 122

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 3e-06
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 33/135 (24%)

Query: 78  AFGKVICAEANGILKQGIITTVAVKML-KEGHSDAEMMDLVSEMEMMKMIGQHINIINLL 136
           A G V  A  + +L +     VA+K L +   +         E+ +MK +  H NII+LL
Sbjct: 29  AQGIVCAAY-DAVLDR----NVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLL 82

Query: 137 GVCT------QDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLI 190
            V T      +   +Y+++E       +    +                       + + 
Sbjct: 83  NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL--------------------DHERMS 122

Query: 191 SFAYQVANGMHYLQS 205
              YQ+  G+ +L S
Sbjct: 123 YLLYQMLCGIKHLHS 137

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	258
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.98
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.98
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.98
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.98
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.94
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.83
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.85
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	95.02
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.93
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	81.88

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-40  Score=273.55  Aligned_cols=161  Identities=20%  Similarity=0.301  Sum_probs=139.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|..+     .+++.||||+++.....+..+.+.+|+.+|+++ +|||||++++++.+++.++|||||
T Consensus        11 ~~lG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_          11 QTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEECC-------CHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEecCcCeEEEEEEEC-----CCCCEEEEEEEehhhcchHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCceeEEEEec
Confidence            38999999999999997     678999999997654444556799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      |++|+|.++|.....                 +++.+++.++.||+.||.|||++||+|||||             |+||
T Consensus        85 ~~gg~L~~~l~~~~~-----------------l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DF  147 (271)
T d1nvra_          85 CSGGELFDRIEPDIG-----------------MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDF  147 (271)
T ss_dssp             CTTEEGGGGSBTTTB-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCC
T ss_pred             cCCCcHHHHHhcCCC-----------------CCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccc
Confidence            999999999976554                 9999999999999999999999999999996             8999


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCC-Cccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                      |+|+......     ...+||+.|||||++.+..+ +.++||-
T Consensus       148 G~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~Diw  190 (271)
T d1nvra_         148 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW  190 (271)
T ss_dssp             TTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHH
T ss_pred             hhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeee
Confidence            9998754332     46789999999999998876 6789973

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-40  Score=270.31  Aligned_cols=161  Identities=22%  Similarity=0.312  Sum_probs=143.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|..+     .+++.||+|++....  .....+.+.+|+.+++.+ +|||||++++++.+++.+++||
T Consensus        12 ~~iG~G~fg~Vy~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1          12 RPLGKGKFGNVYLAREK-----QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEecCCCcEEEEEEEC-----CCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEECCEEEEEE
Confidence            38999999999999997     678999999996421  122346789999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      |||++|+|.+++.....                 +++..++.|+.||+.||+|||++||+|||||             ++
T Consensus        86 Ey~~~g~L~~~l~~~~~-----------------l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~  148 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSK-----------------FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA  148 (263)
T ss_dssp             ECCTTCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred             eecCCCcHHHHHhhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeec
Confidence            99999999999998765                 9999999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC-CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD-STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+|+...... ....||+.|||||++.+..|+.++||.
T Consensus       149 DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~Diw  188 (263)
T d2j4za1         149 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW  188 (263)
T ss_dssp             CCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHH
T ss_pred             ccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhh
Confidence            999998654433 567899999999999999999999973

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.3e-40  Score=274.83  Aligned_cols=160  Identities=24%  Similarity=0.312  Sum_probs=126.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|..+     .+++.||||++...........+.+|+.+|+.+ +|||||++++++.+++.++||||||
T Consensus        16 ~lG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lvmE~~   89 (307)
T d1a06a_          16 VLGTGAFSEVILAEDK-----RTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KHPNIVALDDIYESGGHLYLIMQLV   89 (307)
T ss_dssp             ESBSGGGGGEEEEEET-----TTCCEEEEEEEEC----------CHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEeeccCeEEEEEEEC-----CCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEecc
Confidence            8999999999999987     578999999997654444556788999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------cc
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------FI  216 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------i~  216 (258)
                      ++|+|.++|...+.                 +++..+..++.||+.||.|||++||+|||||                ++
T Consensus        90 ~gg~L~~~l~~~~~-----------------l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~  152 (307)
T d1a06a_          90 SGGELFDRIVEKGF-----------------YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS  152 (307)
T ss_dssp             CSCBHHHHHHTCSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEEC
T ss_pred             CCCcHHHhhhcccC-----------------CCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEe
Confidence            99999999987655                 9999999999999999999999999999995                78


Q ss_pred             CCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+|+......  ...+||+.|||||++.+..|+.++||.
T Consensus       153 DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~Diw  193 (307)
T d1a06a_         153 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW  193 (307)
T ss_dssp             CC------------------CTTSCHHHHTTCCCCTHHHHH
T ss_pred             ccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhh
Confidence            999998654433  467899999999999999999999984

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-39  Score=269.94  Aligned_cols=158  Identities=18%  Similarity=0.283  Sum_probs=140.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .+++.||||+++... ....+.+.+|+.+|+.+ +|||||++++++.+++.++||||||
T Consensus        27 ~iG~G~fg~Vy~a~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          27 KIGQGASGTVYTAMDV-----ATGQEVAIRQMNLQQ-QPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             ECCCSSSCEEEEEEBT-----TTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEecCcCcEEEEEEEC-----CCCCEEEEEEEeccc-ChHHHHHHHHHHHHHhC-CCCCEeeEeEEEEECCEEEEEEEec
Confidence            7999999999999987     678999999997542 22346799999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.+. .                 +++.+++.|+.||+.||.|||++||+|||||             ++|||
T Consensus       100 ~gg~L~~~~~~~-~-----------------l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG  161 (293)
T d1yhwa1         100 AGGSLTDVVTET-C-----------------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG  161 (293)
T ss_dssp             TTCBHHHHHHHS-C-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred             CCCcHHHHhhcc-C-----------------CCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccch
Confidence            999999988753 2                 8999999999999999999999999999996             88999


Q ss_pred             cceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|+......   ...+||+.|+|||++.+..|+.++||.
T Consensus       162 ~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw  200 (293)
T d1yhwa1         162 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW  200 (293)
T ss_dssp             TCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHH
T ss_pred             hheeeccccccccccccCCCccChhhhcCCCCCchhcee
Confidence            998754332   567899999999999999999999984

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-40  Score=277.10  Aligned_cols=160  Identities=19%  Similarity=0.226  Sum_probs=143.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||+|+++........+.+.+|+.+|+.+ +|||||+++++|.+++.++||||||
T Consensus        13 ~iG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~iVmEy~   86 (322)
T d1s9ja_          13 ELGAGNGGVVFKVSHK-----PSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHM   86 (322)
T ss_dssp             EEECCSSCCEEEEEET-----TTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGC-CCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEecCCCeEEEEEEEC-----CCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEcC
Confidence            7999999999999987     678999999998765666677899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CccccCcc-------------ccCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSR-KVGNDAVR-------------FIGF  218 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~iiH~DlK-------------i~df  218 (258)
                      ++|+|.+++.+.+.                 +++..++.++.|++.||.|||++ ||+|||||             |+||
T Consensus        87 ~gg~L~~~l~~~~~-----------------l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DF  149 (322)
T d1s9ja_          87 DGGSLDQVLKKAGR-----------------IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF  149 (322)
T ss_dssp             TTEEHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCC
T ss_pred             CCCcHHHHHhhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeC
Confidence            99999999988765                 99999999999999999999985 99999996             8899


Q ss_pred             Ccceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+|+..... ....+||+.|||||++.+..|+.++||-
T Consensus       150 Gla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiW  187 (322)
T d1s9ja_         150 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW  187 (322)
T ss_dssp             CCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHH
T ss_pred             CCccccCCCccccccCCccccCchHHcCCCCCcHHHHH
Confidence            999865433 3578999999999999999999999973

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-39  Score=263.45  Aligned_cols=160  Identities=19%  Similarity=0.276  Sum_probs=139.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCC-CChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG-HSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~~  146 (258)
                      .+||+|+||.||+|...     .++..||+|++... ......+.|.+|+++|+++ +|||||++++++.+    +..++
T Consensus        15 ~~iG~G~fg~Vy~~~~~-----~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~~~   88 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDT-----ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIV   88 (270)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eEEecCcCcEEEEEEEC-----CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEeeccccCCEEE
Confidence            37999999999999987     57889999999653 2556677899999999999 99999999999875    34589


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--ccccCcc----------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK--VGNDAVR----------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--iiH~DlK----------  214 (258)
                      +||||+++|+|.+++.+...                 +++..++.|+.||+.||+|||+++  |+|||||          
T Consensus        89 ivmE~~~~g~L~~~l~~~~~-----------------~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~  151 (270)
T d1t4ha_          89 LVTELMTSGTLKTYLKRFKV-----------------MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT  151 (270)
T ss_dssp             EEEECCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTT
T ss_pred             EEEeCCCCCcHHHHHhcccc-----------------ccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCC
Confidence            99999999999999988765                 999999999999999999999998  9999996          


Q ss_pred             ----ccCCCcceeeecc-CCccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFH-DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||+|+..... ....+||+.|||||++.+ +|+.++||.
T Consensus       152 ~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIw  196 (270)
T d1t4ha_         152 GSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVY  196 (270)
T ss_dssp             SCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHH
T ss_pred             CCEEEeecCcceeccCCccCCcccCccccCHHHhCC-CCCCcCchh
Confidence                7899999854433 256789999999999976 699999974

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-39  Score=265.25  Aligned_cols=162  Identities=23%  Similarity=0.319  Sum_probs=136.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .+||+|+||.||+|.++.   ..+++.||||+++... +....+.|.+|+.+|+++ +|||||+++|+|.+ +..+||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~---~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~-~~~~lvmE   87 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQM---KKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICEA-ESWMLVME   87 (277)
T ss_dssp             EEEEECSSEEEEEEEEEC---SSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEES-SSEEEEEE
T ss_pred             CCcccCCCeEEEEEEEcc---CCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhC-CCCCCceEEEEecc-CCEEEEEE
Confidence            479999999999998752   2457899999997543 334567899999999999 99999999999965 46789999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                 +++..++.|+.||+.||.|||+++|+|||||             ++|
T Consensus        88 ~~~~g~L~~~l~~~~~-----------------l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~D  150 (277)
T d1xbba_          88 MAELGPLNKYLQQNRH-----------------VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISD  150 (277)
T ss_dssp             CCTTEEHHHHHHHCTT-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECC
T ss_pred             cCCCCcHHHHHhhccC-----------------CCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccc
Confidence            9999999999988665                 9999999999999999999999999999996             789


Q ss_pred             CCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......      ....||+.|||||++.+..++.++||.
T Consensus       151 FGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiw  194 (277)
T d1xbba_         151 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW  194 (277)
T ss_dssp             CTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHH
T ss_pred             hhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhc
Confidence            99998654332      346789999999999999999999974

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-38  Score=264.75  Aligned_cols=162  Identities=24%  Similarity=0.292  Sum_probs=139.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||+|.++..   .++..||||+++........++|.+|+.+|+++ +|||||+++|++.+ +.++||||||
T Consensus        16 ~iG~G~fg~Vy~~~~~~~---~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~-~~~~lvmE~~   90 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMR---KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMA   90 (285)
T ss_dssp             EEECCTTEEEEEEEEC------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSEEEEEECC
T ss_pred             EEecccCeEEEEEEEecC---CCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhC-CCCCEeeEeeeecc-CeEEEEEEeC
Confidence            499999999999987621   345689999998776777778999999999999 99999999999975 4689999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..+..|+.||+.||.|||+++|+|||||             ++|||
T Consensus        91 ~~g~L~~~l~~~~~----------------~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFG  154 (285)
T d1u59a_          91 GGGPLHKFLVGKRE----------------EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG  154 (285)
T ss_dssp             TTEEHHHHHTTCTT----------------TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCT
T ss_pred             CCCcHHHHhhcccc----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccch
Confidence            99999999876542                39999999999999999999999999999995             89999


Q ss_pred             cceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......      ....||+.|+|||++.+..++.++||.
T Consensus       155 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVw  196 (285)
T d1u59a_         155 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW  196 (285)
T ss_dssp             TCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHH
T ss_pred             hhhcccccccccccccccccCccccChHHHhCCCCCccchhh
Confidence            998754332      356788999999999999999999984

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-39  Score=266.79  Aligned_cols=160  Identities=20%  Similarity=0.309  Sum_probs=141.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||||+++.. .....+.+.+|+++|+++ +|||||++++++.+++.++||||||
T Consensus        19 ~iG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~-~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          19 ELGDGAFGKVYKAQNK-----ETSVLAAAKVIDTK-SEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             EEEEETTEEEEEEEET-----TTCCEEEEEEEECS-SSGGGGGTHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEeeCCCcEEEEEEEC-----CCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCeEEEEEecC
Confidence            7999999999999987     67899999999765 445567899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.+...                .+++.++..++.||+.||.|||++||+|||||             |+|||
T Consensus        92 ~~g~L~~~~~~~~~----------------~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG  155 (288)
T d2jfla1          92 AGGAVDAVMLELER----------------PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG  155 (288)
T ss_dssp             TTEEHHHHHHHHTS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEech
Confidence            99999999876542                39999999999999999999999999999996             78999


Q ss_pred             cceeeecc---CCccccccccccccccc-----cCCCCccccee
Q psy12228        220 LCILVFFH---DSTLLKTTSTIASLILR-----NQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~s~~~Dv~  255 (258)
                      +|+.....   .....||+.|||||++.     +..|+.++||-
T Consensus       156 ~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~Diw  199 (288)
T d2jfla1         156 VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW  199 (288)
T ss_dssp             TCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHH
T ss_pred             hhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHH
Confidence            99865432   24678999999999984     56789999973

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-39  Score=267.74  Aligned_cols=160  Identities=17%  Similarity=0.292  Sum_probs=140.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .+++.||||+++...  .....+.+.+|+++|+++ +|||||++++++.+++.+++|||
T Consensus        15 ~lG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmE   88 (288)
T d1uu3a_          15 ILGEGSFSTVVLAREL-----ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLS   88 (288)
T ss_dssp             EEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEeeCCCeEEEEEEEC-----CCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEECCEEEEEEE
Confidence            8999999999999997     578999999996421  123346799999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||++|+|.+++...+.                 +++..++.++.|++.||+|||++||||||||             ++|
T Consensus        89 y~~gg~L~~~~~~~~~-----------------l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~D  151 (288)
T d1uu3a_          89 YAKNGELLKYIRKIGS-----------------FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD  151 (288)
T ss_dssp             CCTTEEHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECC
T ss_pred             ccCCCCHHHhhhccCC-----------------CCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecc
Confidence            9999999999998766                 9999999999999999999999999999996             789


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+|+......     ...+||+.|||||++.+..|+.++||-
T Consensus       152 FG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~Diw  194 (288)
T d1uu3a_         152 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLW  194 (288)
T ss_dssp             CTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHH
T ss_pred             cccceecccCCcccccccccCCccccCceeeccCCCCccccee
Confidence            99998754332     356899999999999999999999973

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.1e-39  Score=267.33  Aligned_cols=160  Identities=30%  Similarity=0.397  Sum_probs=141.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.++     .+++.||||+++...  ...++|.+|+.+|+++ +|||||+++++|.+++..+||||||
T Consensus        24 ~iG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~--~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~iv~E~~   95 (287)
T d1opja_          24 KLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFM   95 (287)
T ss_dssp             ETTTTTTSSEEEEEEG-----GGTEEEEEEECCTTC--SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             EEeeCCCeEEEEEEEC-----CCCeEEEEEEECCcc--chHHHHHHHHHHHHhC-CCCCEecCCccEeeCCeeEEEeecc
Confidence            7999999999999997     578999999997643  2356799999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....               ..+++..++.|+.||+.||.|||++||+|||||             |+|||
T Consensus        96 ~~g~l~~~l~~~~~---------------~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG  160 (287)
T d1opja_          96 TYGNLLDYLRECNR---------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG  160 (287)
T ss_dssp             TTCBHHHHHHHSCT---------------TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             cCcchHHHhhhccc---------------cchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEcccc
Confidence            99999999987543               348999999999999999999999999999995             89999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|+......    ....||+.|+|||++.+..|+.++||.
T Consensus       161 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~Diw  200 (287)
T d1opja_         161 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW  200 (287)
T ss_dssp             CTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHH
T ss_pred             ceeecCCCCceeeccccccccccChHHHcCCCCCchhhhh
Confidence            998654332    244678999999999999999999984

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-38  Score=262.55  Aligned_cols=160  Identities=25%  Similarity=0.355  Sum_probs=143.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-----hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-----DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYV  147 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~l  147 (258)
                      .||+|+||.||+|..+     .+++.||||+++....     ....+.+.+|+.+|+++ +|||||++++++.+++.++|
T Consensus        17 ~lG~G~fg~Vy~~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~i   90 (293)
T d1jksa_          17 ELGSGQFAVVKKCREK-----STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVIL   90 (293)
T ss_dssp             EEEECSSEEEEEEEET-----TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEE
T ss_pred             EEecCCCeEEEEEEEC-----CCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence            8999999999999987     6889999999964321     12357899999999999 99999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------
Q psy12228        148 IVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------  214 (258)
Q Consensus       148 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------  214 (258)
                      |||||++|+|.++|.....                 +++..++.++.||+.||.|||+++|+|||||             
T Consensus        91 v~E~~~gg~L~~~i~~~~~-----------------l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~  153 (293)
T d1jksa_          91 ILELVAGGELFDFLAEKES-----------------LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK  153 (293)
T ss_dssp             EEECCCSCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSS
T ss_pred             EEEcCCCccccchhccccc-----------------cchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcc
Confidence            9999999999999988765                 9999999999999999999999999999985             


Q ss_pred             ----ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ----FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                          ++|||+++......  ....||+.|+|||++.+..++.++||.
T Consensus       154 ~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~Diw  200 (293)
T d1jksa_         154 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW  200 (293)
T ss_dssp             CCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             cceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccch
Confidence                78999998765443  567899999999999999999999974

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3.3e-38  Score=269.12  Aligned_cols=160  Identities=18%  Similarity=0.246  Sum_probs=143.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .++..||||++... .....+.+.+|+.+|+++ +|||||++++++.+++.++||||||
T Consensus        33 ~lG~G~fg~Vy~~~~~-----~~g~~vAvK~i~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          33 ELGTGAFGVVHRVTER-----ATGNNFAAKFVMTP-HESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             EEEEETTEEEEEEEET-----TTTEEEEEEEECCC-SHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             EEecCcCeEEEEEEEC-----CCCCEEEEEEEccc-chhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEcC
Confidence            8999999999999987     67899999999765 455567899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------ccC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------FIG  217 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------i~d  217 (258)
                      ++|+|.+++.....                .+++..++.|+.||+.||.|||++||||||||               |+|
T Consensus       106 ~gg~L~~~l~~~~~----------------~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~D  169 (350)
T d1koaa2         106 SGGELFEKVADEHN----------------KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLID  169 (350)
T ss_dssp             CSCBHHHHHTCTTS----------------CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECC
T ss_pred             CCCCHHHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEee
Confidence            99999999965432                39999999999999999999999999999996               789


Q ss_pred             CCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......  ....||+.|||||++.+..|+.++||.
T Consensus       170 FG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~Diw  209 (350)
T d1koaa2         170 FGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMW  209 (350)
T ss_dssp             CTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHH
T ss_pred             cchheecccccccceecCcccccCHHHHcCCCCChhHhhh
Confidence            99998765443  467999999999999999999999974

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-38  Score=260.54  Aligned_cols=159  Identities=24%  Similarity=0.366  Sum_probs=131.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.+.      ++..||||+++....  ..++|.+|+.+++++ +|||||+++|+|.+++..++||||
T Consensus        11 ~~iG~G~fg~Vy~~~~~------~~~~vAvK~i~~~~~--~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_          11 QEIGSGQFGLVHLGYWL------NKDKVAIKTIREGAM--SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             EEEECCSSCCEEEEEET------TTEEEEEEECCSSSS--CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             EEEeeCCCeEEEEEEEC------CCCEEEEEEECCCcC--cHHHHHHHHHHHHhc-CCCCcccccceeccCCceEEEEEe
Confidence            37999999999999986      457899999976432  235799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..++.|+.||+.||.|||+++|+|||||             ++||
T Consensus        82 ~~~g~L~~~l~~~~~----------------~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DF  145 (263)
T d1sm2a_          82 MEHGCLSDYLRTQRG----------------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDF  145 (263)
T ss_dssp             CTTCBHHHHHHTTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSC
T ss_pred             cCCCcHHHHhhcccc----------------CCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEeccc
Confidence            999999999987543                38999999999999999999999999999995             8999


Q ss_pred             CcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......    ....||+.|+|||++.+..|+.++||.
T Consensus       146 Gla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVw  186 (263)
T d1sm2a_         146 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW  186 (263)
T ss_dssp             C------------------CTTSCCHHHHTTCCCCHHHHHH
T ss_pred             chheeccCCCceeecceecCcccCChHHhcCCCCCchhhhc
Confidence            9998654332    346789999999999999999999984

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-38  Score=267.46  Aligned_cols=161  Identities=20%  Similarity=0.240  Sum_probs=145.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|+.+     .+++.||||+++...  .....+.+.+|+.+|+.+ +|||||++++++.+++.+++||
T Consensus        10 ~~lG~G~fg~Vy~a~~~-----~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_          10 RTLGTGSFGRVHLIRSR-----HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             EEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEecCcCcEEEEEEEC-----CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEeeCCeeeeEe
Confidence            38999999999999987     678999999996431  123356799999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      |||++|+|..++.....                 +++..++.++.||+.||.|||++||+|||||             |+
T Consensus        84 E~~~gg~l~~~~~~~~~-----------------~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~  146 (316)
T d1fota_          84 DYIEGGELFSLLRKSQR-----------------FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKIT  146 (316)
T ss_dssp             CCCCSCBHHHHHHHTSS-----------------CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             eecCCcccccccccccc-----------------ccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEe
Confidence            99999999999988765                 8999999999999999999999999999996             89


Q ss_pred             CCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+|+.........+||+.|||||++.+..|+.++||.
T Consensus       147 DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~Diw  185 (316)
T d1fota_         147 DFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWW  185 (316)
T ss_dssp             CCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHH
T ss_pred             cCccceEeccccccccCcccccCHHHHcCCCCCchhhcc
Confidence            999999877667788999999999999999999999983

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-38  Score=265.33  Aligned_cols=159  Identities=17%  Similarity=0.259  Sum_probs=139.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|...     .++..||||+++...  .....+.+.+|+.+|+++ +|||||++++++.+++.+++|||
T Consensus        22 ~lG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          22 EIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             EEEECSSSEEEEEEET-----TTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEecCCCeEEEEEEEC-----CCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECCEEEEEEE
Confidence            7999999999999987     678999999997543  234457799999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||++|+|..++.....                 +++.+++.|+.||+.||.|||++||||||||             |+|
T Consensus        96 ~~~~g~l~~~~~~~~~-----------------l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~D  158 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKP-----------------LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGD  158 (309)
T ss_dssp             CCSEEHHHHHHHHTSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECC
T ss_pred             ecCCCchHHHHHhCCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEee
Confidence            9999999877766554                 9999999999999999999999999999996             889


Q ss_pred             CCcceeeeccCCcccccccccccccccc---CCCCccccee
Q psy12228        218 FDLCILVFFHDSTLLKTTSTIASLILRN---QKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~Dv~  255 (258)
                      ||+|+... ......||+.|||||++.+   ..|+.++||-
T Consensus       159 FG~a~~~~-~~~~~~GT~~Y~APE~~~~~~~~~y~~~~Diw  198 (309)
T d1u5ra_         159 FGSASIMA-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVW  198 (309)
T ss_dssp             CTTCBSSS-SBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHH
T ss_pred             cccccccC-CCCccccCccccCHHHHhccCCCCcCchhhhh
Confidence            99998643 3456789999999999864   4689999974

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-38  Score=268.20  Aligned_cols=161  Identities=22%  Similarity=0.297  Sum_probs=143.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~  149 (258)
                      ..||+|+||.||+|+.+     .+++.||||+++...  .....+.+.+|+.+|+.+ +||||+++++++.+++.+++||
T Consensus        11 ~~lG~G~fg~V~~~~~~-----~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_          11 KLLGKGTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             EEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEecCcCeEEEEEEEC-----CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-CCCCEEEEEeeeccccccccce
Confidence            38999999999999987     688999999996431  122356789999999999 9999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      |||++|+|.+++...+.                 +++..++.++.||+.||+|||++||||||||             |+
T Consensus        85 ey~~gg~L~~~~~~~~~-----------------~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~  147 (337)
T d1o6la_          85 EYANGGELFFHLSRERV-----------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKIT  147 (337)
T ss_dssp             ECCTTCBHHHHHHHHSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             eccCCCchhhhhhcccC-----------------CcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEe
Confidence            99999999999998876                 9999999999999999999999999999996             89


Q ss_pred             CCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+|+......   ...+||+.|+|||++.+..|+.++||-
T Consensus       148 DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~Diw  189 (337)
T d1o6la_         148 DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW  189 (337)
T ss_dssp             CCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHH
T ss_pred             ecccccccccCCcccccceeCHHHhhhhhccCCCCChhhccc
Confidence            999998644322   467899999999999999999999973

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.2e-38  Score=263.98  Aligned_cols=166  Identities=26%  Similarity=0.310  Sum_probs=134.2

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      ..+||+|+||.||+|.++..  ......||||.+.........+.|.+|+.+|+++ +|||||+++|+|.+++.+++|||
T Consensus        31 ~~~lG~G~fg~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~iv~E  107 (299)
T d1jpaa_          31 EQVIGAGEFGEVCSGHLKLP--GKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTKSTPVMIITE  107 (299)
T ss_dssp             EEEEEECSSSEEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEEeeCCCeEEEEEEEeCC--CCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEE
Confidence            34899999999999998621  1123479999998776777788999999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      ||++|+|.+++.....                .+++.++..|+.||+.||.|||+++|+|||||             |+|
T Consensus       108 y~~~g~L~~~~~~~~~----------------~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~D  171 (299)
T d1jpaa_         108 FMENGSLDSFLRQNDG----------------QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSD  171 (299)
T ss_dssp             CCTTEEHHHHHHTTTT----------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECC
T ss_pred             ecCCCcceeeeccccC----------------CCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECC
Confidence            9999999999887543                38999999999999999999999999999995             899


Q ss_pred             CCcceeeeccC--------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD--------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......        ....||+.|||||++.+..|+.++||.
T Consensus       172 FGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvw  217 (299)
T d1jpaa_         172 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVW  217 (299)
T ss_dssp             C-----------------------CGGGSCHHHHHSCCCCHHHHHH
T ss_pred             cccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccc
Confidence            99998654332        134578999999999999999999974

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-39  Score=263.73  Aligned_cols=164  Identities=17%  Similarity=0.244  Sum_probs=131.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVIV  149 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv~  149 (258)
                      .||+|+||.||+|..+     .+++.||||+++... ++...+.+.+|+.+|+++ +|||||++++++.+  ++.++|||
T Consensus        11 ~iG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~ivm   84 (269)
T d2java1          11 TIGTGSYGRCQKIRRK-----SDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVM   84 (269)
T ss_dssp             EEEECSSEEEEEEEET-----TTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC----CEEEEE
T ss_pred             EEecCCCeEEEEEEEC-----CCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCCCCEEEEEE
Confidence            8999999999999987     678999999997543 556677899999999999 99999999999965  45689999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----ccccCcc----------
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK-----VGNDAVR----------  214 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-----iiH~DlK----------  214 (258)
                      |||++|+|.+++.+...             ....+++..++.++.||+.||.|||+++     |||||||          
T Consensus        85 Ey~~~g~L~~~i~~~~~-------------~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~  151 (269)
T d2java1          85 EYCEGGDLASVITKGTK-------------ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ  151 (269)
T ss_dssp             ECCTTEEHHHHHHHHHH-------------HTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTS
T ss_pred             ecCCCCcHHHHHHhccc-------------cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCC
Confidence            99999999999975421             1134999999999999999999999976     9999996          


Q ss_pred             ---ccCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         |+|||+|+......   ....||+.|||||++.+..|++++||.
T Consensus       152 ~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIw  198 (269)
T d2java1         152 NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW  198 (269)
T ss_dssp             CEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHH
T ss_pred             cEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHH
Confidence               88999998654332   467899999999999999999999983

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-38  Score=266.54  Aligned_cols=184  Identities=36%  Similarity=0.485  Sum_probs=142.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||+|.+.+.........||+|.+...........+.+|+.+|.++.+|||||++++++.+.+.+++||||
T Consensus        43 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey  122 (325)
T d1rjba_          43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEY  122 (325)
T ss_dssp             EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEc
Confidence            38999999999999987544445567899999976555556678999999999987899999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCC------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESP------LGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      |++|+|.++|+...........      .-........+++..++.|+.||+.||.|||+++|||||||           
T Consensus       123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~  202 (325)
T d1rjba_         123 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV  202 (325)
T ss_dssp             CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTE
T ss_pred             CCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCe
Confidence            9999999999876431000000      00001123458999999999999999999999999999996           


Q ss_pred             --ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        |+|||+|+......     ....||+.|||||++.+..|+.++||.
T Consensus       203 ~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~Diw  250 (325)
T d1rjba_         203 VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW  250 (325)
T ss_dssp             EEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             EEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceecc
Confidence              88999998654432     356679999999999999999999973

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-38  Score=259.79  Aligned_cols=157  Identities=22%  Similarity=0.292  Sum_probs=131.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|+++        ..||||+++... +....+.|.+|+.+|+++ +|||||++++++.. +.++|||||
T Consensus        15 ~lG~G~fg~Vy~~~~~--------~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~~-~~~~lv~Ey   84 (276)
T d1uwha_          15 RIGSGSFGTVYKGKWH--------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYSTA-PQLAIVTQW   84 (276)
T ss_dssp             EEEECSSCEEEEEESS--------SEEEEEECCCSSCCTTHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             EEeeCCCcEEEEEEEC--------CEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeeeEEEec-cEEEEEEec
Confidence            8999999999999876        359999997443 455678899999999999 99999999998754 568999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      |++|+|.++|.....                .+++..+..|+.||+.||+|||+++|||||||             |+||
T Consensus        85 ~~~g~L~~~l~~~~~----------------~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DF  148 (276)
T d1uwha_          85 CEGSSLYHHLHIIET----------------KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF  148 (276)
T ss_dssp             CCEEEHHHHHHTSCC----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCC
T ss_pred             CCCCCHHHHHhhccC----------------CCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccc
Confidence            999999999976542                39999999999999999999999999999995             8999


Q ss_pred             CcceeeeccC-----Ccccccccccccccccc---CCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRN---QKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~---~~~s~~~Dv~  255 (258)
                      |+|+......     ....||+.|||||++.+   ..|+.++||.
T Consensus       149 Gla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiw  193 (276)
T d1uwha_         149 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY  193 (276)
T ss_dssp             CCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHH
T ss_pred             cceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhh
Confidence            9998654322     45689999999999965   3589999974

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-37  Score=257.77  Aligned_cols=167  Identities=24%  Similarity=0.289  Sum_probs=138.3

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      +.+||+|+||.||+|.++... ......||||+++...+.....+|.+|+.+++++ +|||||+++|++.+.+..++|||
T Consensus        12 ~~~iG~G~fG~Vy~~~~~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~~~g~~~~~~~~~~v~e   89 (283)
T d1mqba_          12 QKVIGAGEFGEVYKGMLKTSS-GKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITE   89 (283)
T ss_dssp             EEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEE
T ss_pred             eeEEeeCCCeEEEEEEEeCCC-CEEEEEEEEEEECcccChHHHHHHHHHHHHHHhc-CCCCEeeeeEEEecCCceEEEEE
Confidence            448999999999999987311 1233689999998776777778899999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+.+|+|.+++.....                .+++.++..++.||+.||.|||+++|+|||||             |+|
T Consensus        90 ~~~~~~l~~~~~~~~~----------------~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~D  153 (283)
T d1mqba_          90 YMENGALDKFLREKDG----------------EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSD  153 (283)
T ss_dssp             CCTTEEHHHHHHHTTT----------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECC
T ss_pred             ecccCcchhhhhcccc----------------cccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcc
Confidence            9999999998876543                39999999999999999999999999999995             889


Q ss_pred             CCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......      ....||+.|||||++.+..++.++||.
T Consensus       154 FGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~  197 (283)
T d1mqba_         154 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVW  197 (283)
T ss_dssp             CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHH
T ss_pred             cchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCccccc
Confidence            99998654332      245688999999999999999999985

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.5e-37  Score=265.27  Aligned_cols=160  Identities=18%  Similarity=0.254  Sum_probs=143.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .+++.||||+++.. .......+.+|+.+|+++ +|||||++++++.+++.++||||||
T Consensus        36 ~lG~G~fg~V~~a~~~-----~~~~~vAiK~i~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          36 ELGSGAFGVVHRCVEK-----ATGRVFVAKFINTP-YPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             EEEEETTEEEEEEEET-----TTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEecCCCeEEEEEEEC-----CCCCEEEEEEECCc-chhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEcC
Confidence            8999999999999987     67899999999865 344567789999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------ccC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------FIG  217 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------i~d  217 (258)
                      ++|+|.+++.....                .+++.+++.|+.||+.||.|||++||||||||               |+|
T Consensus       109 ~gg~L~~~~~~~~~----------------~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~D  172 (352)
T d1koba_         109 SGGELFDRIAAEDY----------------KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIID  172 (352)
T ss_dssp             CCCBHHHHTTCTTC----------------CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECC
T ss_pred             CCChHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEee
Confidence            99999998876542                39999999999999999999999999999996               789


Q ss_pred             CCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+|+......  ....||+.|+|||++.+..|+.++||.
T Consensus       173 FGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  212 (352)
T d1koba_         173 FGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMW  212 (352)
T ss_dssp             CTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHH
T ss_pred             cccceecCCCCceeeccCcccccCHHHHcCCCCCCccchH
Confidence            99998765543  467899999999999999999999974

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-38  Score=258.88  Aligned_cols=158  Identities=28%  Similarity=0.373  Sum_probs=136.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.++      ++..||||+++...  ...+.|.+|+.+|+++ +|||||+++|++.+ +..++||||+
T Consensus        20 ~iG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~-~~~~iv~Ey~   89 (272)
T d1qpca_          20 RLGAGQFGEVWMGYYN------GHTKVAVKSLKQGS--MSPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPIYIITEYM   89 (272)
T ss_dssp             EEEEETTEEEEEEEET------TTEEEEEEEECTTS--SCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             EEecCCCcEEEEEEEC------CCCEEEEEEEccCc--CCHHHHHHHHHHHHhC-CCCCEeEEEeeecc-CCeEEEEEeC
Confidence            7999999999999986      45789999997642  2345799999999999 99999999998854 5679999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....               ..+++..++.|+.||+.||.|||+++|+|||||             |+|||
T Consensus        90 ~~g~L~~~~~~~~~---------------~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFG  154 (272)
T d1qpca_          90 ENGSLVDFLKTPSG---------------IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG  154 (272)
T ss_dssp             TTCBHHHHTTSHHH---------------HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred             CCCcHHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeecccc
Confidence            99999998876442               238999999999999999999999999999995             88999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|+......    ....||+.|||||++.+..++.++||.
T Consensus       155 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvw  194 (272)
T d1qpca_         155 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW  194 (272)
T ss_dssp             TCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHH
T ss_pred             ceEEccCCccccccccCCcccccChHHHhCCCCCchhhhh
Confidence            998764432    356788999999999999999999984

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-37  Score=264.82  Aligned_cols=160  Identities=18%  Similarity=0.229  Sum_probs=145.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|..+     .++..||||+++...  .....+.+.+|+.+|+.+ +|||||++++++.+.+..++|||
T Consensus        48 ~lG~G~fg~Vy~a~~~-----~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~v~e  121 (350)
T d1rdqe_          48 TLGTGSFGRVMLVKHK-----ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             EEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EeecCcCcEEEEEEEC-----CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-CCCcEeecccccccccccccccc
Confidence            8999999999999987     688999999996421  123346789999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+.+|+|..++...+.                 +++..++.|+.||+.||.|||+++|||||||             |+|
T Consensus       122 ~~~~g~l~~~l~~~~~-----------------l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~D  184 (350)
T d1rdqe_         122 YVAGGEMFSHLRRIGR-----------------FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD  184 (350)
T ss_dssp             CCTTCBHHHHHHHHCC-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             cccccchhhhHhhcCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeee
Confidence            9999999999988766                 9999999999999999999999999999996             899


Q ss_pred             CCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+|+..........||+.|||||++.+..|+.++||-
T Consensus       185 FG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~Diw  222 (350)
T d1rdqe_         185 FGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWW  222 (350)
T ss_dssp             CTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHH
T ss_pred             ceeeeecccccccccCccccCCHHHHcCCCCCcccccc
Confidence            99999877666788999999999999999999999973

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-37  Score=252.67  Aligned_cols=159  Identities=25%  Similarity=0.366  Sum_probs=139.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||+|+++      ++..||||+++....  ..++|++|+.+++++ +||||++++|+|.+++.+++||||
T Consensus        10 ~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~--~~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~~iv~Ey   80 (258)
T d1k2pa_          10 KELGTGQFGVVKYGKWR------GQYDVAIKMIKEGSM--SEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEY   80 (258)
T ss_dssp             CCCCEETTEEEEEEEET------TTEEEEEEEEESSSS--CHHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSEEEEEEC
T ss_pred             EEEecCCCeEEEEEEEC------CCCEEEEEEECcCcC--CHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEc
Confidence            38999999999999985      567899999986432  345799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++.....                .+++..++.|+.|+++||.|||++||+|||||             ++||
T Consensus        81 ~~~g~l~~~~~~~~~----------------~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~Df  144 (258)
T d1k2pa_          81 MANGCLLNYLREMRH----------------RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF  144 (258)
T ss_dssp             CTTEEHHHHHHSGGG----------------CCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCC
T ss_pred             cCCCcHHHhhhcccc----------------CCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcc
Confidence            999999999876543                38999999999999999999999999999995             8999


Q ss_pred             CcceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......    ....||+.|+|||++.+..|+.++||.
T Consensus       145 G~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiw  185 (258)
T d1k2pa_         145 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW  185 (258)
T ss_dssp             SSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             hhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeec
Confidence            9998654332    356788999999999999999999983

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-37  Score=259.19  Aligned_cols=157  Identities=20%  Similarity=0.226  Sum_probs=136.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc----CCcEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ----DGPLYVI  148 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~----~~~~~lv  148 (258)
                      +||+|+||.||+|...     .+++.||||+++..      ..+.+|+.++.++.+|||||++++++.+    +..++||
T Consensus        19 ~lG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~iv   87 (335)
T d2ozaa1          19 VLGLGINGKVLQIFNK-----RTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   87 (335)
T ss_dssp             EEEECSSCEEEEEEET-----TTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EeeeccCeEEEEEEEC-----CCCCEEEEEEECCc------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEE
Confidence            6999999999999987     57899999999752      3467899987766589999999999875    3568999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------  214 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------  214 (258)
                      ||||++|+|.++|...+.               ..+++.+++.|+.||+.||+|||++||+|||||              
T Consensus        88 mEy~~gg~L~~~i~~~~~---------------~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~  152 (335)
T d2ozaa1          88 MECLDGGELFSRIQDRGD---------------QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI  152 (335)
T ss_dssp             EECCCSEEHHHHHHSCSC---------------CCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCC
T ss_pred             EECCCCCcHHHHHHhcCC---------------CCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccc
Confidence            999999999999987542               349999999999999999999999999999995              


Q ss_pred             --ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        ++|||+|+......  ....||+.|||||++.+..|+.++||-
T Consensus       153 ~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~Diw  197 (335)
T d2ozaa1         153 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW  197 (335)
T ss_dssp             EEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHH
T ss_pred             ccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHH
Confidence              78999998654443  567899999999999999999999973

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.9e-36  Score=250.64  Aligned_cols=160  Identities=16%  Similarity=0.233  Sum_probs=133.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC----cEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG----PLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~----~~~  146 (258)
                      .||+|+||.||+|...     .+++.||||+++...  .......+.+|+.+++.+ +|||||++++++...+    .++
T Consensus        14 ~lG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~~~~~~~~   87 (277)
T d1o6ya_          14 ILGFGGMSEVHLARDL-----RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPY   87 (277)
T ss_dssp             EEEECSSEEEEEEEET-----TTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEECSSSEEEE
T ss_pred             EEeeCCCeEEEEEEEC-----CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-CCCCCCcccceeeeccCCCceEE
Confidence            8999999999999987     578999999997543  344567899999999999 9999999999998654    388


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      |||||+++|+|.+++...+.                 +++.+++.|+.||+.||.|||++||+|||||            
T Consensus        88 lvmE~~~g~~L~~~~~~~~~-----------------l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~  150 (277)
T d1o6ya_          88 IVMEYVDGVTLRDIVHTEGP-----------------MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV  150 (277)
T ss_dssp             EEEECCCEEEHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCE
T ss_pred             EEEECCCCCEehhhhcccCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccc
Confidence            99999999999999988766                 9999999999999999999999999999997            


Q ss_pred             -ccCCCcceeeecc------CCccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFH------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||++......      ....+||+.|||||++.+..|++++||.
T Consensus       151 ~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~Diw  198 (277)
T d1o6ya_         151 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY  198 (277)
T ss_dssp             EECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHH
T ss_pred             eeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecc
Confidence             5788887754332      2467899999999999999999999974

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-36  Score=255.13  Aligned_cols=159  Identities=20%  Similarity=0.266  Sum_probs=142.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|...     .+++.||||+++..  ..+...+.+|+.+|+.+ +|||||++++++.+++.++||||||
T Consensus        12 ~lG~G~fg~Vy~~~~~-----~~~~~~AiK~i~~~--~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_          12 DLGRGEFGIVHRCVET-----SSKKTYMAKFVKVK--GTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             EEEECSSEEEEEEEET-----TTTEEEEEEEECCC--THHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             EEecCCCeEEEEEEEC-----CCCcEEEEEEEcCC--cccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEecC
Confidence            8999999999999987     67899999999864  33345688999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------------ccC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------------FIG  217 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------------i~d  217 (258)
                      ++|+|.++|.....                .+++.+++.|+.||+.||.|||++||+|||||               ++|
T Consensus        84 ~gg~L~~~i~~~~~----------------~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~D  147 (321)
T d1tkia_          84 SGLDIFERINTSAF----------------ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIE  147 (321)
T ss_dssp             CCCBHHHHHTSSSC----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECC
T ss_pred             CCCcHHHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcc
Confidence            99999999986542                39999999999999999999999999999996               789


Q ss_pred             CCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......  ....+|+.|+|||.+.+..|+.++||-
T Consensus       148 FG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiW  187 (321)
T d1tkia_         148 FGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMW  187 (321)
T ss_dssp             CTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHH
T ss_pred             cchhhccccCCcccccccccccccchhccCCCCCchhhcc
Confidence            99998765443  467899999999999999999999973

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-36  Score=252.72  Aligned_cols=182  Identities=36%  Similarity=0.514  Sum_probs=137.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-CcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-GPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-~~~~lv~e~  151 (258)
                      .||+|+||.||+|.+.+.....+++.||||+++........+.+.+|...+.++.+|+||+.+++++..+ +.+++||||
T Consensus        20 ~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~   99 (299)
T d1ywna1          20 PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF   99 (299)
T ss_dssp             EEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEEC
T ss_pred             EEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEe
Confidence            8999999999999987655556778999999987666777788999999999987899999999998764 468999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      |++|+|.++|....... ..............+++.+++.|+.||+.||.|||+++|||||||             |+||
T Consensus       100 ~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DF  178 (299)
T d1ywna1         100 CKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF  178 (299)
T ss_dssp             CTTCBHHHHHHHTGGGB-CC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC-
T ss_pred             cCCCcHHHHHHhccccc-cccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccC
Confidence            99999999998654200 000000011123458999999999999999999999999999995             8999


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+|+......     ....||+.|||||++.+..++.++||.
T Consensus       179 Gla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiw  220 (299)
T d1ywna1         179 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW  220 (299)
T ss_dssp             -----CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHH
T ss_pred             cchhhccccccccccCceeeCccccchhHhhcCCCCccccee
Confidence            9998654332     356899999999999999999999984

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.2e-36  Score=253.09  Aligned_cols=182  Identities=28%  Similarity=0.364  Sum_probs=147.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|++++.....++..||||+++........++|.+|+.+|+++ +||||++++++|.+.+..+++|||+
T Consensus        20 ~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~v~e~~   98 (301)
T d1lufa_          20 DIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYM   98 (301)
T ss_dssp             EEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             EEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhc-CCCCcccceeeeccCCceEEEEEec
Confidence            899999999999998865555678899999998776777778899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCC-------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        153 PHGNLRDFLRKHRPSSGYESP-------LGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++|+|.++|............       ..........+++..++.|+.|++.||+|||+++|||||||           
T Consensus        99 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~  178 (301)
T d1lufa_          99 AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMV  178 (301)
T ss_dssp             TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             CCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCc
Confidence            999999999865431111111       11122334568999999999999999999999999999995           


Q ss_pred             --ccCCCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        215 --FIGFDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --i~dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                        |+|||+|+......     ....||+.|+|||++.+..||.++||.
T Consensus       179 ~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVw  226 (301)
T d1lufa_         179 VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVW  226 (301)
T ss_dssp             EEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             EEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhc
Confidence              89999998543322     356788999999999999999999984

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-36  Score=255.71  Aligned_cols=161  Identities=21%  Similarity=0.289  Sum_probs=140.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHH-HhcCCCcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMK-MIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~-~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..||+|+||+||+|...     .+++.||||+++...  .....+.+..|..++. .+ +|||||++++++.+++.++||
T Consensus         8 ~~iG~G~fg~Vy~~~~~-----~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~-~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           8 KMLGKGSFGKVFLAEFK-----KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW-EHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             EEEEECSSSEEEEEEET-----TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT-TCTTBCCEEEEEECSSEEEEE
T ss_pred             eEEecCCCcEEEEEEEC-----CCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhC-CCCcEEEEEEEEccCCceeEE
Confidence            48999999999999997     688999999996421  1233456778887776 57 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      ||||++|+|.+++.....                 +++.+++.++.||+.||+|||+++|+|||||             +
T Consensus        82 mEy~~~g~L~~~i~~~~~-----------------~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl  144 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHK-----------------FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI  144 (320)
T ss_dssp             EECCTTCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             EeecCCCcHHHHhhccCC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceec
Confidence            999999999999998776                 9999999999999999999999999999996             7


Q ss_pred             cCCCcceeeeccC---CccccccccccccccccCCCCccccee
Q psy12228        216 IGFDLCILVFFHD---STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|||+++......   ....||+.|+|||++.+..|+.++||.
T Consensus       145 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  187 (320)
T d1xjda_         145 ADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWW  187 (320)
T ss_dssp             CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHH
T ss_pred             cccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhh
Confidence            8999998654332   467899999999999999999999984

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=9.9e-36  Score=246.05  Aligned_cols=161  Identities=15%  Similarity=0.172  Sum_probs=140.3

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC--------hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS--------DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG  143 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~  143 (258)
                      ..||+|+||+||+|+..     .+++.||||+++....        ....+.+.+|+.+++++..|||||++++++.+++
T Consensus         9 ~~iG~G~~g~V~~~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~   83 (277)
T d1phka_           9 EILGRGVSSVVRRCIHK-----PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT   83 (277)
T ss_dssp             EEEEECSSEEEEEEEET-----TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             eEEecCcCeEEEEEEEC-----CCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc
Confidence            38999999999999987     5789999999965431        1233568999999999955999999999999999


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      .++||||||++|+|.++|+..+.                 +++.+++.|+.||+.||+|||++||+|||||         
T Consensus        84 ~~~ivmE~~~~g~L~~~l~~~~~-----------------l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~  146 (277)
T d1phka_          84 FFFLVFDLMKKGELFDYLTEKVT-----------------LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD  146 (277)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             ceEEEEEcCCCchHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCC
Confidence            99999999999999999988765                 9999999999999999999999999999995         


Q ss_pred             ----ccCCCcceeeecc--CCcccccccccccccccc------CCCCcccce
Q psy12228        215 ----FIGFDLCILVFFH--DSTLLKTTSTIASLILRN------QKVSVLLDL  254 (258)
Q Consensus       215 ----i~dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~------~~~s~~~Dv  254 (258)
                          |+|||+++.....  .....||+.|+|||++.+      ..++.++||
T Consensus       147 ~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~Di  198 (277)
T d1phka_         147 MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM  198 (277)
T ss_dssp             CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHH
T ss_pred             CCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheE
Confidence                8899999876543  356789999999999864      456888997

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-36  Score=252.62  Aligned_cols=183  Identities=33%  Similarity=0.432  Sum_probs=149.8

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      +||+|+||.||+|.+.+.....++..||||+++..........|.+|+.+++.+.+|||||+++++|.+.+..++|||||
T Consensus        30 ~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~  109 (311)
T d1t46a_          30 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYC  109 (311)
T ss_dssp             EEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             EEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcC
Confidence            89999999999999876555568899999999877677777889999999999977999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESP-LGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      ++|+|.++|+........... ..........+++..+..|+.||+.||.|||+++++|||||             ++||
T Consensus       110 ~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~Df  189 (311)
T d1t46a_         110 CYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF  189 (311)
T ss_dssp             TTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCC
T ss_pred             CCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCccccccc
Confidence            999999999876531111100 01111234469999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......     ....||+.|+|||++.+..++.++||.
T Consensus       190 G~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIw  231 (311)
T d1t46a_         190 GLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW  231 (311)
T ss_dssp             GGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             chheeccCCCcceEeeecccChHHcCHHHhcCCCCCCccccc
Confidence            9998654332     356889999999999999999999973

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-36  Score=251.14  Aligned_cols=158  Identities=25%  Similarity=0.353  Sum_probs=131.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.++      .+..||||+++....  ..+.|.+|+.+|+++ +|||||+++|++.+ +..++||||+
T Consensus        24 ~iG~G~fg~Vy~~~~~------~~~~vAiK~l~~~~~--~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~-~~~~lv~Ey~   93 (285)
T d1fmka3          24 KLGQGCFGEVWMGTWN------GTTRVAIKTLKPGTM--SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYM   93 (285)
T ss_dssp             EEEECSSCEEEEEEET------TTEEEEEEECCTTSS--CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             EEeeCCCeEEEEEEEC------CCCEEEEEEECcccC--CHHHHHHHHHHHHhc-ccCCEeEEEEEEec-CCeEEEEEec
Confidence            8999999999999986      335799999975432  346799999999999 99999999999854 5689999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|..++.....               ..+++.+++.++.||+.||.|||+++|+|||||             |+|||
T Consensus        94 ~~g~l~~~~~~~~~---------------~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfG  158 (285)
T d1fmka3          94 SKGSLLDFLKGETG---------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG  158 (285)
T ss_dssp             TTCBHHHHHSHHHH---------------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             CCCchhhhhhhccc---------------ccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccc
Confidence            99999999876532               239999999999999999999999999999995             89999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +++......    ....||+.|+|||++.+..++.++||.
T Consensus       159 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~  198 (285)
T d1fmka3         159 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW  198 (285)
T ss_dssp             TTC--------------CCGGGSCHHHHHHCCCCHHHHHH
T ss_pred             hhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhh
Confidence            998654332    346789999999999999999999984

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-36  Score=253.27  Aligned_cols=165  Identities=22%  Similarity=0.313  Sum_probs=134.4

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||+|.+..... ....+||+|.++...+....+.|.+|+.+++++ +|||||+++|+|.++ ..++++|+
T Consensus        15 ~~lG~G~fG~Vy~~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~-~~~~v~e~   91 (317)
T d1xkka_          15 KVLGSGAFGTVYKGLWIPEGE-KVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL   91 (317)
T ss_dssp             EEEEECSSEEEEEEEECC-----CCEEEEEEEECC----CTHHHHHHHHHHHHHC-CCTTBCCEEEEEESS-SEEEEEEC
T ss_pred             eEEecCCCeEEEEEEEcCCCC-EEEEEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC-CeeEEEEe
Confidence            389999999999999862111 122479999997655556678899999999999 999999999999865 57888999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +.+|+|.+++.....                .+++..++.|+.||+.||.|||+++|||||||             ++||
T Consensus        92 ~~~~~l~~~~~~~~~----------------~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DF  155 (317)
T d1xkka_          92 MPFGCLLDYVREHKD----------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF  155 (317)
T ss_dssp             CTTCBHHHHHHHTSS----------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCC
T ss_pred             ccCCccccccccccc----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeecc
Confidence            999999999887643                39999999999999999999999999999995             8999


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......     ....||+.|+|||++.++.|+.++||.
T Consensus       156 Gla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvw  197 (317)
T d1xkka_         156 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW  197 (317)
T ss_dssp             SHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHH
T ss_pred             ccceecccccccccccccccCccccChHHHhcCCCChhhhhh
Confidence            9998654332     245689999999999999999999974

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-36  Score=246.85  Aligned_cols=163  Identities=24%  Similarity=0.324  Sum_probs=130.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      .||+|+||.||+|.+..  .+..+..||||.++........+.|.+|+.+|+++ +|||||++++++. ++.+++||||+
T Consensus        14 ~iG~G~fg~Vy~a~~~~--~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~~iv~E~~   89 (273)
T d1mp8a_          14 CIGEGQFGDVHQGIYMS--PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELC   89 (273)
T ss_dssp             EEEECSSSEEEEEEECC--C--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             EEeeCCCcEEEEEEEec--CCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCeEEEEEEec
Confidence            89999999999998862  11345789999998766777778899999999999 9999999999996 46789999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGFD  219 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~dfg  219 (258)
                      ++|+|.+++.....                .+++..++.++.||+.||.|||+++|+|||||             ++|||
T Consensus        90 ~~g~l~~~~~~~~~----------------~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG  153 (273)
T d1mp8a_          90 TLGELRSFLQVRKY----------------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG  153 (273)
T ss_dssp             TTEEHHHHHHHTTT----------------TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--
T ss_pred             cCCcHHhhhhccCC----------------CCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccch
Confidence            99999999876543                38999999999999999999999999999995             89999


Q ss_pred             cceeeeccC----CccccccccccccccccCCCCccccee
Q psy12228        220 LCILVFFHD----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       220 l~~~~~~~~----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      +|+......    ....||+.|+|||++.+..|+.++||.
T Consensus       154 ~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~Diw  193 (273)
T d1mp8a_         154 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW  193 (273)
T ss_dssp             -----------------CCGGGCCHHHHHHCCCSHHHHHH
T ss_pred             hheeccCCcceeccceecCcccchhhHhccCCCCCccccc
Confidence            998654332    456788999999999999999999984

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=249.58  Aligned_cols=157  Identities=29%  Similarity=0.424  Sum_probs=128.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-CCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-~~~~~lv~e~  151 (258)
                      .||+|+||.||+|.+++       ..||||+++..   ...+.|.+|+++++++ +|||||+++|+|.+ ++.+++||||
T Consensus        14 ~lG~G~fg~Vy~~~~~~-------~~vAvK~i~~~---~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_          14 TIGKGEFGDVMLGDYRG-------NKVAVKCIKND---ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             EEEECSSCEEEEEEETT-------EEEEEEECCCC---C--HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECC
T ss_pred             EEecCCCeEEEEEEECC-------eEEEEEEECcH---HHHHHHHHHHHHHHhC-CCCCEeeEEEEEEecCCcEEEEEec
Confidence            79999999999999863       67999999754   3346799999999999 99999999999965 4568999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.++|.....               ..+++..++.|+.||+.||.|||+++|+|||||             ++||
T Consensus        83 ~~~g~L~~~l~~~~~---------------~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~df  147 (262)
T d1byga_          83 MAKGSLVDYLRSRGR---------------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDF  147 (262)
T ss_dssp             CTTEEHHHHHHHHHH---------------HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCC
T ss_pred             cCCCCHHHHHHhcCC---------------CCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeeccc
Confidence            999999999976542               238999999999999999999999999999995             8899


Q ss_pred             CcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++..........+|+.|+|||++.+..+++++||.
T Consensus       148 g~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIw  184 (262)
T d1byga_         148 GLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW  184 (262)
T ss_dssp             CC------------CCTTTSCHHHHHHCCCCHHHHHH
T ss_pred             ccceecCCCCccccccccCCChHHHhCCCCChHHHHH
Confidence            9999766666777889999999999999999999984

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=8.8e-36  Score=255.36  Aligned_cols=161  Identities=16%  Similarity=0.156  Sum_probs=135.6

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHH---HHHHHHhcCCCcccceeeeEEcCCcEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSE---MEMMKMIGQHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E---~~~l~~l~~h~nIv~l~~~~~~~~~~~  146 (258)
                      .+||+|+||.||+|...     .+++.||||++....  .......+.+|   +.+++.+ +|||||++++++.+++.++
T Consensus        10 ~~lG~G~fg~Vy~~~~~-----~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3          10 RIIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             EEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEEE
T ss_pred             eEEecCCCeEEEEEEEC-----CCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEECCEEE
Confidence            48999999999999987     678999999995321  11112334444   5556666 7999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      +|||||++|+|.++|.....                 +++..++.|+.||+.||.|||++||||||||            
T Consensus        84 ivmE~~~gg~L~~~l~~~~~-----------------~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~i  146 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGV-----------------FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHV  146 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCE
T ss_pred             EEEEecCCCcHHHHHHhccc-----------------ccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcE
Confidence            99999999999999998766                 8999999999999999999999999999996            


Q ss_pred             -ccCCCcceeeecc-CCcccccccccccccccc-CCCCccccee
Q psy12228        215 -FIGFDLCILVFFH-DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                       |+|||+|+..... .....||+.|+|||++.. ..|+.++||.
T Consensus       147 Kl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~Diw  190 (364)
T d1omwa3         147 RISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF  190 (364)
T ss_dssp             EECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHH
T ss_pred             EEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchh
Confidence             8899999865443 357789999999999964 5789999973

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-36  Score=250.22  Aligned_cols=180  Identities=31%  Similarity=0.433  Sum_probs=137.2

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .+||+|+||.||+|.+++   .+....||||.++........+.|.+|+.+|+++.+|||||+++|+|.+.+.+++||||
T Consensus        16 ~~iG~G~fg~Vy~~~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey   92 (309)
T d1fvra_          16 DVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY   92 (309)
T ss_dssp             EEEECGGGCEEEEEEEEE---TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             EEEeeCCCcEEEEEEECC---CCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEe
Confidence            389999999999999872   12234688999876555566778999999999986799999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.++|........ .............+++..+..++.||+.||.|||+++|+|||||             |+||
T Consensus        93 ~~~g~L~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~Df  171 (309)
T d1fvra_          93 APHGNLLDFLRKSRVLET-DPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF  171 (309)
T ss_dssp             CTTCBHHHHHHTTCHHHH-CHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCT
T ss_pred             cCCCcHHHHHhhcccccc-chhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccc
Confidence            999999999976421000 00000000112459999999999999999999999999999996             8899


Q ss_pred             CcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......  ....||..|+|||.+.+..|+.++||.
T Consensus       172 G~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvw  210 (309)
T d1fvra_         172 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW  210 (309)
T ss_dssp             TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHH
T ss_pred             cccccccccccccceecCCcccchHHhccCCCCccceee
Confidence            9998544332  456789999999999999999999974

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-35  Score=247.08  Aligned_cols=176  Identities=25%  Similarity=0.349  Sum_probs=146.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|.+++.....++..||||+++..........|.+|+.+++++ +|||||+++++|..++..++||||
T Consensus        26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~e~  104 (308)
T d1p4oa_          26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIMEL  104 (308)
T ss_dssp             EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHc-CCCCEeeeeeEEecCCceeEEEee
Confidence            3899999999999998754444567899999998766777777899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +++|+|.+++........       .......+++..+..++.|++.||.|||+++|+|||||             |+||
T Consensus       105 ~~~g~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DF  177 (308)
T d1p4oa_         105 MTRGDLKSYLRSLRPAMA-------NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF  177 (308)
T ss_dssp             CTTCBHHHHHHHHHHHHH-------HCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCT
T ss_pred             cCCCCHHHHHHhcccccc-------cccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeec
Confidence            999999999876431000       00012347999999999999999999999999999995             8999


Q ss_pred             CcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        219 DLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |+++......     ....+|+.|+|||.+.+..++.++||.
T Consensus       178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~  219 (308)
T d1p4oa_         178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW  219 (308)
T ss_dssp             TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             ccceeccCCcceeeccceecccccCCHHHHccCCCCcccccc
Confidence            9998654332     345788999999999999999999984

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-35  Score=246.62  Aligned_cols=166  Identities=29%  Similarity=0.396  Sum_probs=140.8

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc-CCcEEEEE
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ-DGPLYVIV  149 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~-~~~~~lv~  149 (258)
                      +.+||+|+||+||+|.+...  ..+...||||.++........++|.+|+++|+++ +|||||+++|++.+ ++..++||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~--~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~lv~  108 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVL  108 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC------CEEEEEEEECCCCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEETTTEEEEEE
T ss_pred             ceEEeecCCeEEEEEEEECC--CCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-CCCCEeEEeEEEEecCCceEEEE
Confidence            34899999999999998631  1233579999998766777788999999999999 99999999999875 45799999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------cc
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FI  216 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~  216 (258)
                      |||++|+|.+++.....                .+++..++.++.|++.||.|||+++|+|||||             ++
T Consensus       109 E~~~~g~l~~~~~~~~~----------------~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~  172 (311)
T d1r0pa_         109 PYMKHGDLRNFIRNETH----------------NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA  172 (311)
T ss_dssp             ECCTTCBHHHHHHCTTC----------------CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEEC
T ss_pred             EEeecCchhhhhccccc----------------cchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEe
Confidence            99999999999886543                37889999999999999999999999999996             78


Q ss_pred             CCCcceeeeccC-------CccccccccccccccccCCCCccccee
Q psy12228        217 GFDLCILVFFHD-------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       217 dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      |||+++......       ....||+.|+|||.+.+..++.++||.
T Consensus       173 DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~  218 (311)
T d1r0pa_         173 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW  218 (311)
T ss_dssp             SSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHH
T ss_pred             cccchhhccccccccceecccccccccccChHHHhcCCCCChhHhh
Confidence            999998654332       245788999999999999999999963

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-36  Score=250.39  Aligned_cols=160  Identities=18%  Similarity=0.207  Sum_probs=132.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh----HHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD----AEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      +||+|+||+||+|..+     .+++.||||+++.....    ...+.+.+|+.+|+.+ +|||||++++++.+++.++||
T Consensus         5 ~lG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~~~iv   78 (299)
T d1ua2a_           5 FLGEGQFATVYKARDK-----NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLV   78 (299)
T ss_dssp             EEEEETTEEEEEEECS-----SCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEE
T ss_pred             EeccCcCeEEEEEEEC-----CCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCceeeh
Confidence            7999999999999987     57899999999653221    1235688999999999 999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+.++++..++.....                 +++..+..|+.||+.||+|||++||+|||||             +
T Consensus        79 mE~~~~~~~~~~~~~~~~-----------------l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL  141 (299)
T d1ua2a_          79 FDFMETDLEVIIKDNSLV-----------------LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKL  141 (299)
T ss_dssp             EECCSEEHHHHHTTCCSS-----------------CCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             hhhhcchHHhhhhhcccC-----------------CCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCcccc
Confidence            999998776655544333                 8999999999999999999999999999996             7


Q ss_pred             cCCCcceeeeccC---Ccccccccccccccccc-CCCCccccee
Q psy12228        216 IGFDLCILVFFHD---STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      +|||+++......   ...+||+.|+|||++.+ ..|+.++||-
T Consensus       142 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  185 (299)
T d1ua2a_         142 ADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMW  185 (299)
T ss_dssp             CCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHH
T ss_pred             ccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhh
Confidence            8999997644332   45689999999999865 4679999974

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-35  Score=243.58  Aligned_cols=182  Identities=45%  Similarity=0.634  Sum_probs=141.6

Q ss_pred             eeeecCceEEEEEEEccccc--CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILK--QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|+..+...  ..++..||||+++..........+.+|...+.++.+|||||+++++|.+++..++|||
T Consensus        20 ~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e   99 (299)
T d1fgka_          20 PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE   99 (299)
T ss_dssp             ECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred             EEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEE
Confidence            79999999999999764221  1345689999998877777778899999999999789999999999999999999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.++|...... +..............+++.+++.++.||+.||.|||+++|||||||             ++|
T Consensus       100 ~~~~g~l~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~d  178 (299)
T d1fgka_         100 YASKGNLREYLQARRPP-GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD  178 (299)
T ss_dssp             CCTTCBHHHHHHTTSCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECS
T ss_pred             ccCCCcHHHHHHhhcCC-ccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEecc
Confidence            99999999999876431 1111111122234569999999999999999999999999999996             789


Q ss_pred             CCcceeeeccC-----CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD-----STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......     ....+|+.|+|||++.++.|++++||.
T Consensus       179 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~Diw  221 (299)
T d1fgka_         179 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW  221 (299)
T ss_dssp             TTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHH
T ss_pred             chhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhH
Confidence            99998654432     346788999999999999999999984

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-35  Score=240.72  Aligned_cols=163  Identities=30%  Similarity=0.348  Sum_probs=128.6

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC--ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH--SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .||+|+||.||+|++..  ..+....||||+++...  ..+..++|.+|+.+|+++ +|||||+++|+|.+ +..++|||
T Consensus        15 ~iG~G~fg~Vy~~~~~~--~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~-~~~~lv~e   90 (273)
T d1u46a_          15 KLGDGSFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLT-PPMKMVTE   90 (273)
T ss_dssp             ECC----CCCEEEEEEC--TTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEEE
T ss_pred             EEecCCCeEEEEEEEEC--CCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEee-cchheeee
Confidence            79999999999999763  12345689999997543  334457899999999999 99999999999975 46789999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccC
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIG  217 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~d  217 (258)
                      |+++|+|.+++.....                .+++..++.++.||+.||.|||+++|+|||||             ++|
T Consensus        91 ~~~~~~l~~~~~~~~~----------------~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~D  154 (273)
T d1u46a_          91 LAPLGSLLDRLRKHQG----------------HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD  154 (273)
T ss_dssp             CCTTCBHHHHHHHHGG----------------GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECC
T ss_pred             eecCcchhhhhhcccC----------------CCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeecc
Confidence            9999999998887543                39999999999999999999999999999995             789


Q ss_pred             CCcceeeeccC------CccccccccccccccccCCCCccccee
Q psy12228        218 FDLCILVFFHD------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       218 fgl~~~~~~~~------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ||+++......      ....|+..|+|||++.+..++.++||.
T Consensus       155 fGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~  198 (273)
T d1u46a_         155 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW  198 (273)
T ss_dssp             CTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHH
T ss_pred             chhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhh
Confidence            99999754332      345678899999999999999999974

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-35  Score=240.98  Aligned_cols=160  Identities=18%  Similarity=0.168  Sum_probs=136.2

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCCh-----HHHHHHHHHHHHHHHhc-CCCcccceeeeEEcCCcEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSD-----AEMMDLVSEMEMMKMIG-QHINIINLLGVCTQDGPLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~-~h~nIv~l~~~~~~~~~~~  146 (258)
                      +||+|+||.||+|...     .++..||||+++.....     ....++.+|+.+|+++. .|||||++++++.+++..+
T Consensus        11 ~lG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~   85 (273)
T d1xwsa_          11 LLGSGGFGSVYSGIRV-----SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV   85 (273)
T ss_dssp             EEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred             EEeeCCCeEEEEEEEC-----CCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEE
Confidence            8999999999999987     67899999999643211     11234678999999993 2899999999999999999


Q ss_pred             EEEEeCCC-CCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        147 VIVEFAPH-GNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       147 lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +||||+.+ +++.+++.....                 +++..++.|+.||+.||.|||++||+|||||           
T Consensus        86 lv~e~~~~~~~l~~~~~~~~~-----------------l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~  148 (273)
T d1xwsa_          86 LILERPEPVQDLFDFITERGA-----------------LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG  148 (273)
T ss_dssp             EEEECCSSEEEHHHHHHHHCS-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT
T ss_pred             EEEEeccCcchHHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCC
Confidence            99999975 688888887765                 9999999999999999999999999999996           


Q ss_pred             ---ccCCCcceeeeccC-CccccccccccccccccCCC-Ccccce
Q psy12228        215 ---FIGFDLCILVFFHD-STLLKTTSTIASLILRNQKV-SVLLDL  254 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~-~~~~gt~~y~aPE~~~~~~~-s~~~Dv  254 (258)
                         ++|||+|+...... ....||+.|+|||++.+..+ +.++||
T Consensus       149 ~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~Di  193 (273)
T d1xwsa_         149 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV  193 (273)
T ss_dssp             EEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHH
T ss_pred             eEEECccccceecccccccccccCCCcCCHHHHcCCCCCCccccc
Confidence               78999998654443 56789999999999988776 677896

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-34  Score=238.80  Aligned_cols=161  Identities=21%  Similarity=0.272  Sum_probs=134.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||.||+|...     .+++.||||+++.... ....+++.+|+.+|+++ +|||||++++++.+++.+++||||
T Consensus         9 ~lG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~iv~e~   82 (298)
T d1gz8a_           9 KIGEGTYGVVYKARNK-----LTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEF   82 (298)
T ss_dssp             EEEECSSSEEEEEEET-----TTCCEEEEEEEC-------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEecCcCeEEEEEEEC-----CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-CCCcEEEeccccccccceeEEEee
Confidence            8999999999999997     6789999999965432 23356799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +.+ ++.+++.....               ..+++..++.++.||+.||.|||++||||||||             ++||
T Consensus        83 ~~~-~~~~~~~~~~~---------------~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DF  146 (298)
T d1gz8a_          83 LHQ-DLKKFMDASAL---------------TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF  146 (298)
T ss_dssp             CSE-EHHHHHHHTTT---------------TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECST
T ss_pred             cCC-chhhhhhhhcc---------------cCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccC
Confidence            976 66666654332               349999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC---CccccccccccccccccCCC-Cccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQKV-SVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~-s~~~Dv~  255 (258)
                      |+|+......   ....||+.|+|||++....+ +.++||-
T Consensus       147 G~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~Diw  187 (298)
T d1gz8a_         147 GLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW  187 (298)
T ss_dssp             THHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHH
T ss_pred             CcceeccCCcccceeecccceeeehhhhccccCCCcccccc
Confidence            9998654432   45689999999999877665 7889973

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3.8e-33  Score=235.94  Aligned_cols=154  Identities=16%  Similarity=0.214  Sum_probs=132.5

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--CCcEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--DGPLYVIV  149 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--~~~~~lv~  149 (258)
                      .+||+|+||.||+|+..     .+++.||||+++..    ..+++.+|+.+|+.+..||||+++++++..  ...+++||
T Consensus        41 ~~LG~G~fg~V~~a~~~-----~~~~~vAiK~i~~~----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          41 RKLGRGKYSEVFEAINI-----TNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             EEEEECSSEEEEEEEET-----TTTEEEEEEEECSS----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             EEEecCcCeEEEEEEEC-----CCCCEEEEEEECHH----HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            38999999999999987     67899999999753    235688999999999569999999999974  34699999


Q ss_pred             EeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc--------------c
Q psy12228        150 EFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR--------------F  215 (258)
Q Consensus       150 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK--------------i  215 (258)
                      |||.+|+|..+.+                    .+++..++.++.||+.||.|||++||+|||||              +
T Consensus       112 e~~~~~~L~~~~~--------------------~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl  171 (328)
T d3bqca1         112 EHVNNTDFKQLYQ--------------------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL  171 (328)
T ss_dssp             ECCCSCBGGGTTT--------------------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEE
T ss_pred             eecCCCcHHHHhc--------------------CCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeee
Confidence            9999999876532                    28999999999999999999999999999996              7


Q ss_pred             cCCCcceeeecc--CCccccccccccccccccC-CCCcccce
Q psy12228        216 IGFDLCILVFFH--DSTLLKTTSTIASLILRNQ-KVSVLLDL  254 (258)
Q Consensus       216 ~dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~s~~~Dv  254 (258)
                      +|||+|+.....  .....+|+.|+|||.+.+. .++.++||
T Consensus       172 ~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di  213 (328)
T d3bqca1         172 IDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDM  213 (328)
T ss_dssp             CCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHH
T ss_pred             cccccceeccCCCcccccccCccccCcccccCCCCCCcccch
Confidence            899999876543  3577899999999998775 47999997

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-33  Score=236.06  Aligned_cols=153  Identities=21%  Similarity=0.307  Sum_probs=125.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHH--HHHHHHHhcCCCcccceeeeEEcCC----cEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVS--EMEMMKMIGQHINIINLLGVCTQDG----PLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~--E~~~l~~l~~h~nIv~l~~~~~~~~----~~~  146 (258)
                      .||+|+||.||+|++.       +..||||+++..    ....+.+  |+..+..+ +|||||++++++.+.+    .++
T Consensus        10 ~iG~G~fg~Vy~~~~~-------g~~vAvK~~~~~----~~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~~~~~~   77 (303)
T d1vjya_          10 SIGKGRFGEVWRGKWR-------GEEVAVKIFSSR----EERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             EEECCSSSEEEEEEET-------TEEEEEEEECGG----GHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEE
T ss_pred             EEeeCCCeEEEEEEEC-------CEEEEEEEECcc----chhHHHHHHHHHHHhhC-CCCcCcceEEEEEeCCCcceEEE
Confidence            7999999999999875       479999999642    2233444  44455677 8999999999998654    589


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh--------CCccccCcc----
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS--------RKVGNDAVR----  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~--------~~iiH~DlK----  214 (258)
                      +|||||++|+|.++|++..                  +++..++.++.|++.||.|||+        +||||||||    
T Consensus        78 lv~Ey~~~g~L~~~l~~~~------------------l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NI  139 (303)
T d1vjya_          78 LVSDYHEHGSLFDYLNRYT------------------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI  139 (303)
T ss_dssp             EEEECCTTCBHHHHHHHCC------------------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGE
T ss_pred             EEEecccCCCHHHHHhcCC------------------CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccce
Confidence            9999999999999998643                  8999999999999999999997        599999995    


Q ss_pred             ---------ccCCCcceeeeccC-------CccccccccccccccccC------CCCccccee
Q psy12228        215 ---------FIGFDLCILVFFHD-------STLLKTTSTIASLILRNQ------KVSVLLDLI  255 (258)
Q Consensus       215 ---------i~dfgl~~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~s~~~Dv~  255 (258)
                               |+|||+++......       ....||+.|+|||++.+.      .++.++||.
T Consensus       140 Ll~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~  202 (303)
T d1vjya_         140 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  202 (303)
T ss_dssp             EECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred             EEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhh
Confidence                     89999998765432       357899999999999874      367788874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-33  Score=236.73  Aligned_cols=157  Identities=22%  Similarity=0.309  Sum_probs=131.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC------cE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG------PL  145 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~------~~  145 (258)
                      .||+|+||.||+|..+     .+++.||||+++... +....+.+.+|+.+|+.+ +|||||+++++|...+      .+
T Consensus        25 ~lG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpniv~l~~~~~~~~~~~~~~~~   98 (346)
T d1cm8a_          25 PVGSGAYGAVCSAVDG-----RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDF   98 (346)
T ss_dssp             EC------CEEEEEET-----TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             EEecCCCeEEEEEEEC-----CCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhc-CCCCeeEEEEEeccCccccccceE
Confidence            7999999999999987     678999999997543 445567899999999999 9999999999998654      47


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      ++||||+ +++|..+++.. .                 +++..++.++.||+.||.|||++||+|||||           
T Consensus        99 ~lv~e~~-~~~l~~~~~~~-~-----------------l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~  159 (346)
T d1cm8a_          99 YLVMPFM-GTDLGKLMKHE-K-----------------LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE  159 (346)
T ss_dssp             EEEEECC-SEEHHHHHHHC-C-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC
T ss_pred             EEEEecc-cccHHHHHHhc-c-----------------ccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccc
Confidence            9999999 45787776543 3                 9999999999999999999999999999996           


Q ss_pred             --ccCCCcceeeeccCCccccccccccccccccC-CCCcccce
Q psy12228        215 --FIGFDLCILVFFHDSTLLKTTSTIASLILRNQ-KVSVLLDL  254 (258)
Q Consensus       215 --i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~Dv  254 (258)
                        ++|||+|+..........||+.|+|||++.+. .++.++||
T Consensus       160 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di  202 (346)
T d1cm8a_         160 LKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDI  202 (346)
T ss_dssp             EEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHH
T ss_pred             cccccccceeccCCccccccccccccCHHHHcCCCCCCccchh
Confidence              78999999877777788999999999998764 56899997

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-33  Score=236.47  Aligned_cols=159  Identities=19%  Similarity=0.227  Sum_probs=131.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCC----cEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDG----PLYVI  148 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~----~~~lv  148 (258)
                      .||+|+||.||+|..+     .+++.||||+++........+.+++|+.+|+.+ +||||+++++++....    ..+++
T Consensus        15 ~LG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~~~~~~~~l   88 (345)
T d1pmea_          15 YIGEGAYGMVCSAYDN-----VNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYL   88 (345)
T ss_dssp             ECC---CCCEEEEEET-----TTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             EEeeccCeEEEEEEEC-----CCCcEEEEEEEehhcChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeeccccccceEEE
Confidence            8999999999999987     678999999998655566678899999999999 9999999999997643    23455


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      ++++.+|+|.+++....                  +++..++.++.||+.||+|||++||||||||             +
T Consensus        89 ~~~~~~g~L~~~l~~~~------------------l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl  150 (345)
T d1pmea_          89 VTHLMGADLYKLLKTQH------------------LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI  150 (345)
T ss_dssp             EEECCCEEHHHHHHHCC------------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             EEeecCCchhhhhhcCC------------------CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEE
Confidence            56677899999997643                  8999999999999999999999999999996             7


Q ss_pred             cCCCcceeeecc------CCcccccccccccccccc-CCCCccccee
Q psy12228        216 IGFDLCILVFFH------DSTLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                      +|||++......      ....+||+.|+|||++.. ..++.++||-
T Consensus       151 ~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~Diw  197 (345)
T d1pmea_         151 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW  197 (345)
T ss_dssp             CCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHH
T ss_pred             cccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhh
Confidence            899999865433      245679999999999854 5678999974

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=9.3e-33  Score=230.03  Aligned_cols=159  Identities=14%  Similarity=0.080  Sum_probs=137.0

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      ..||+|+||.||+|...     .+++.||||+++.....   ..+.+|++.++.+.+|+||+.+++++.++...++||||
T Consensus        11 ~~iG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_          11 RRIGEGSFGVIFEGTNL-----LNNQQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             EEEEECSSCEEEEEEET-----TTTEEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             EEEecCCCeEEEEEEEC-----CCCCEEEEEEEccccCc---HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            38999999999999987     57899999998654322   34678999999996669999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------------
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------------  214 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------------  214 (258)
                      + +|+|.+++.....                .+++..+..++.|++.||+|||++||+|||||                 
T Consensus        83 ~-~~~l~~~~~~~~~----------------~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~v  145 (293)
T d1csna_          83 L-GPSLEDLLDLCGR----------------KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMI  145 (293)
T ss_dssp             C-CCBHHHHHHHTTT----------------CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCE
T ss_pred             c-CCCHHHHHHhhcc----------------chhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCce
Confidence            9 5799999877543                38999999999999999999999999999996                 


Q ss_pred             -ccCCCcceeeecc----------CCccccccccccccccccCCCCccccee
Q psy12228        215 -FIGFDLCILVFFH----------DSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                       ++|||+|+.....          .....||+.|||||++.+..+++++||.
T Consensus       146 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~Diw  197 (293)
T d1csna_         146 YVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLE  197 (293)
T ss_dssp             EECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             EEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHH
Confidence             7899999875432          1356899999999999999999999974

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=5e-33  Score=232.87  Aligned_cols=163  Identities=18%  Similarity=0.269  Sum_probs=129.4

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhc--CCCcccceeeeEEc-----CCc
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIG--QHINIINLLGVCTQ-----DGP  144 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--~h~nIv~l~~~~~~-----~~~  144 (258)
                      .||+|+||.||+|....    ..++.||||+++.... ......+.+|+.+|+.+.  +||||++++++|..     ...
T Consensus        14 ~LG~G~fg~V~~a~~~~----~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~   89 (305)
T d1blxa_          14 EIGEGAYGKVFKARDLK----NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK   89 (305)
T ss_dssp             EEEEETTEEEEEEEETT----TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEE
T ss_pred             EEecccCeEEEEEEEEC----CCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCce
Confidence            89999999999999852    2357899999964322 222234667777766552  79999999999863     236


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      ++++|||+.+|++........                ..+++..++.++.|++.||+|||+++|+|||||          
T Consensus        90 ~~~~~e~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~  153 (305)
T d1blxa_          90 LTLVFEHVDQDLTTYLDKVPE----------------PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG  153 (305)
T ss_dssp             EEEEEECCSCBHHHHHHHSCT----------------TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             EEEEEEeccCCchhhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCC
Confidence            899999999866654444332                348999999999999999999999999999996          


Q ss_pred             ---ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++......  ....||+.|+|||++.+..|+.++||-
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~Diw  199 (305)
T d1blxa_         154 QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLW  199 (305)
T ss_dssp             CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHH
T ss_pred             CeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhh
Confidence               78999988654333  578999999999999999999999974

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.98  E-value=4.6e-33  Score=231.10  Aligned_cols=159  Identities=21%  Similarity=0.207  Sum_probs=132.0

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-hHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-DAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      +||+|+||.||+|+.+      +++.||||+++.... ....+.+.+|+.+|+.+ +|||||++++++.+++..+++||+
T Consensus         9 ~iG~G~fg~Vy~~~~~------~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           9 KIGEGTYGVVYKAQNN------YGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             EEEEETTEEEEEEEET------TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             EEecCCCcEEEEEEeC------CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-CCCcEEeeeeecccCCceeEEEEe
Confidence            7999999999999875      568999999975432 23357799999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +.++.+..+......                 +++..+..++.||+.||+|||+++|||||||             ++||
T Consensus        82 ~~~~~~~~~~~~~~~-----------------l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~Df  144 (286)
T d1ob3a_          82 LDQDLKKLLDVCEGG-----------------LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADF  144 (286)
T ss_dssp             CSEEHHHHHHTSTTC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCT
T ss_pred             ehhhhHHHHHhhcCC-----------------cchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEeccc
Confidence            998666666555444                 9999999999999999999999999999996             7899


Q ss_pred             Ccceeeecc---CCccccccccccccccccC-CCCccccee
Q psy12228        219 DLCILVFFH---DSTLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                      |++......   .....+++.|+|||.+.+. .++.++||.
T Consensus       145 G~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~Diw  185 (286)
T d1ob3a_         145 GLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW  185 (286)
T ss_dssp             THHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHH
T ss_pred             ccceecccCccccceecccchhhhHHHHhCCCCCCcceeeh
Confidence            999764433   2456789999999998764 569999974

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=3.7e-32  Score=226.97  Aligned_cols=158  Identities=17%  Similarity=0.083  Sum_probs=130.1

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcc-cceeeeEEcCCcEEEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINI-INLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nI-v~l~~~~~~~~~~~lv~e  150 (258)
                      ..||+|+||.||+|...     .+++.||||++......   +++..|+++++.+ +|+|+ +.+.+++.+++..++|||
T Consensus        13 ~~iG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~~---~~~~~E~~i~~~l-~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_          13 RKIGSGSFGDIYLGTDI-----AAGEEVAIKLECVKTKH---PQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             EEEEECSSSEEEEEEET-----TTTEEEEEEEEESCTTS---CCHHHHHHHHHHS-TTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             EEEeeCCCcEEEEEEEC-----CCCCEEEEEEEchhccC---HHHHHHHHHHHHc-cCCCcccEEEEEEecCCEEEEEEE
Confidence            38999999999999987     57899999998764222   3478899999999 66654 555566677778999999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------------
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------------  214 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------------  214 (258)
                      |+. |+|.+.+.....                .+++..+..++.|++.||+|||++||||||||                
T Consensus        84 ~~~-~~l~~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vk  146 (299)
T d1ckia_          84 LLG-PSLEDLFNFCSR----------------KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVY  146 (299)
T ss_dssp             CCC-CBHHHHHHHTTT----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEE
T ss_pred             EcC-CchhhhhhhccC----------------CCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceee
Confidence            995 577777765442                39999999999999999999999999999996                


Q ss_pred             ccCCCcceeeeccC----------CccccccccccccccccCCCCccccee
Q psy12228        215 FIGFDLCILVFFHD----------STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 i~dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                      ++|||+|+......          ....||+.|||||++.+..+++++||.
T Consensus       147 l~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  197 (299)
T d1ckia_         147 IIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE  197 (299)
T ss_dssp             ECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHH
T ss_pred             eeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEE
Confidence            67999998764322          356899999999999999999999974

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.3e-32  Score=233.12  Aligned_cols=159  Identities=16%  Similarity=0.188  Sum_probs=128.9

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC------CcE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD------GPL  145 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~------~~~  145 (258)
                      .+||+|+||+||+|+..     .+++.||||+++....     ...+|+.+|+.+ +||||++++++|...      ..+
T Consensus        26 k~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~-----~~~~Ei~il~~l-~h~niv~~~~~~~~~~~~~~~~~~   94 (350)
T d1q5ka_          26 KVIGNGSFGVVYQAKLC-----DSGELVAIKKVLQDKR-----FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYL   94 (350)
T ss_dssp             EEEEEETTEEEEEEEET-----TTCCEEEEEEEECCSS-----SCCHHHHHHHHC-CCTTBCCEEEEEEEC--CCSCCEE
T ss_pred             eEEeeCcCeEEEEEEEC-----CCCCEEEEEEECccch-----HHHHHHHHHHhc-CCCCCCcEEEEEEecCccCCceEE
Confidence            37999999999999997     6789999999976422     234799999999 999999999998643      247


Q ss_pred             EEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-----------
Q psy12228        146 YVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-----------  214 (258)
Q Consensus       146 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-----------  214 (258)
                      +||||||++| +...+.....             ....+++.+++.|+.||+.||+|||++||+|||||           
T Consensus        95 ~lv~Ey~~~~-~~~~l~~~~~-------------~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~  160 (350)
T d1q5ka_          95 NLVLDYVPET-VYRVARHYSR-------------AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA  160 (350)
T ss_dssp             EEEEECCSEE-HHHHHHHHHH-------------TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTC
T ss_pred             EEEEeccCCc-cHHHHHhhhh-------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCC
Confidence            8999999875 4444432111             11349999999999999999999999999999996           


Q ss_pred             ---ccCCCcceeeeccC--Ccccccccccccccccc-CCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD--STLLKTTSTIASLILRN-QKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~s~~~Dv~  255 (258)
                         |+|||+++......  ....||+.|+|||.+.+ ..|+.++||-
T Consensus       161 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIw  207 (350)
T d1q5ka_         161 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVW  207 (350)
T ss_dssp             CEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHH
T ss_pred             ceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeec
Confidence               78999998765443  56789999999999865 5789999974

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.7e-32  Score=229.73  Aligned_cols=160  Identities=18%  Similarity=0.280  Sum_probs=129.7

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc--------CC
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ--------DG  143 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~--------~~  143 (258)
                      .||+|+||+||+|...     .+++.||||++.... .+....++.+|+.+|+.+ +||||+++++++..        .+
T Consensus        17 ~LG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~~~~~~~~~~   90 (318)
T d3blha1          17 KIGQGTFGEVFKARHR-----KTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKG   90 (318)
T ss_dssp             EEEECSSSEEEEEEET-----TTCCEEEEEEC----CTTSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC----------
T ss_pred             EEecCcCeEEEEEEEC-----CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHh-cCCCccceEeeeecccccccccCc
Confidence            8999999999999987     678999999986432 333456789999999999 99999999999865        34


Q ss_pred             cEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc---------
Q psy12228        144 PLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR---------  214 (258)
Q Consensus       144 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK---------  214 (258)
                      .++++|||+.++.+..+.....                 .+++..++.++.||+.||.|||++||+|||||         
T Consensus        91 ~~~iv~e~~~~~~~~~~~~~~~-----------------~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~  153 (318)
T d3blha1          91 SIYLVFDFCEHDLAGLLSNVLV-----------------KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD  153 (318)
T ss_dssp             CEEEEEECCCEEHHHHHTCTTC-----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             eEEEEEeccCCCccchhhhccc-----------------ccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCC
Confidence            5899999999866654443333                 38999999999999999999999999999996         


Q ss_pred             ----ccCCCcceeeecc-------CCccccccccccccccccC-CCCccccee
Q psy12228        215 ----FIGFDLCILVFFH-------DSTLLKTTSTIASLILRNQ-KVSVLLDLI  255 (258)
Q Consensus       215 ----i~dfgl~~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~s~~~Dv~  255 (258)
                          ++|||+++.....       ....+||+.|+|||++.+. .|++++||-
T Consensus       154 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~Diw  206 (318)
T d3blha1         154 GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLW  206 (318)
T ss_dssp             SCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHH
T ss_pred             CcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcc
Confidence                7899999765432       2356899999999998765 689999973

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.6e-32  Score=224.49  Aligned_cols=160  Identities=21%  Similarity=0.237  Sum_probs=140.1

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEe
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEF  151 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~  151 (258)
                      .||+|+||+||+|+..     .+++.||||+++... ......++.+|+.+|+.+ +||||+++++++.+....++++|+
T Consensus         9 ~LG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~iv~~~   82 (292)
T d1unla_           9 KIGEGTYGTVFKAKNR-----ETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             EEEECSSSEEEEEEET-----TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEecCcCeEEEEEEEC-----CCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhc-CcCCEEeeccccccccceeEEeee
Confidence            8999999999999987     678999999996543 344567899999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------ccCC
Q psy12228        152 APHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------FIGF  218 (258)
Q Consensus       152 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i~df  218 (258)
                      +.+++|..++...+.                 +++..++.++.|++.||+|||++||+|||||             ++||
T Consensus        83 ~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DF  145 (292)
T d1unla_          83 CDQDLKKYFDSCNGD-----------------LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANF  145 (292)
T ss_dssp             CSEEHHHHHHHTTTC-----------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCC
T ss_pred             ccccccccccccccc-----------------cchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeec
Confidence            999998888876655                 8999999999999999999999999999996             7899


Q ss_pred             CcceeeeccC---CccccccccccccccccCC-CCccccee
Q psy12228        219 DLCILVFFHD---STLLKTTSTIASLILRNQK-VSVLLDLI  255 (258)
Q Consensus       219 gl~~~~~~~~---~~~~gt~~y~aPE~~~~~~-~s~~~Dv~  255 (258)
                      |.++......   ....+++.|+|||++.+.. ++.++||.
T Consensus       146 G~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Diw  186 (292)
T d1unla_         146 GLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW  186 (292)
T ss_dssp             TTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHH
T ss_pred             chhhcccCCCccceeeccccchhhhhHhccCCCCCchhhcc
Confidence            9998765443   3556778999999988765 58999974

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.6e-32  Score=231.64  Aligned_cols=158  Identities=22%  Similarity=0.220  Sum_probs=124.7

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEc------CCc
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQ------DGP  144 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~------~~~  144 (258)
                      .+||+|+||+||+|...     .++..||||+++... +.....++.+|+.+++++ +|||||++++++..      ...
T Consensus        23 ~~LG~G~fg~V~~~~d~-----~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          23 KPIGSGAQGIVCAAYDA-----VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             EECSCC--CEEEEEEET-----TTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTCCE
T ss_pred             EEeecCcCeEEEEEEEC-----CCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEecccccccCce
Confidence            38999999999999987     678999999997543 445567899999999999 99999999999964      357


Q ss_pred             EEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc----------
Q psy12228        145 LYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR----------  214 (258)
Q Consensus       145 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK----------  214 (258)
                      +|+|||||.+ ++.+.+..  .                 +++..++.++.||+.||.|||++||+|||||          
T Consensus        97 ~~iv~Ey~~~-~l~~~~~~--~-----------------~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~  156 (355)
T d2b1pa1          97 VYLVMELMDA-NLCQVIQM--E-----------------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  156 (355)
T ss_dssp             EEEEEECCSE-EHHHHHTS--C-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             eEEEEeccch-HHHHhhhc--C-----------------CCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccc
Confidence            8999999976 55555532  2                 8999999999999999999999999999997          


Q ss_pred             ---ccCCCcceeeeccC--CccccccccccccccccCCCCccccee
Q psy12228        215 ---FIGFDLCILVFFHD--STLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 ---i~dfgl~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                         ++|||+++......  ....+|+.|+|||++.+..+++++||-
T Consensus       157 ~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~Diw  202 (355)
T d2b1pa1         157 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW  202 (355)
T ss_dssp             CEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHH
T ss_pred             ceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccc
Confidence               67899887654443  567899999999999999999999973

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.1e-32  Score=229.13  Aligned_cols=159  Identities=22%  Similarity=0.222  Sum_probs=132.5

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCC-ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcC-----CcEE
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH-SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQD-----GPLY  146 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~-----~~~~  146 (258)
                      .||+|+||.||+|...     .+++.||||+++... +....+++.+|+.+|+.+ +|||||++++++...     ...+
T Consensus        25 ~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~~~~~~~~~~~~   98 (348)
T d2gfsa1          25 PVGSGAYGSVCAAFDT-----KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDV   98 (348)
T ss_dssp             ECGGGTTSSEEEEEET-----TTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSTTTCCCC
T ss_pred             EEecCCCeEEEEEEEC-----CCCCEEEEEEECchhcChHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeccccccCceE
Confidence            7999999999999987     678999999997543 345567899999999999 999999999999643     2346


Q ss_pred             EEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc------------
Q psy12228        147 VIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR------------  214 (258)
Q Consensus       147 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK------------  214 (258)
                      ++++++.+|+|.+++... .                 +++..++.++.||+.||+|||++||+|||||            
T Consensus        99 ~i~~~~~gg~L~~~~~~~-~-----------------l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~  160 (348)
T d2gfsa1          99 YLVTHLMGADLNNIVKCQ-K-----------------LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL  160 (348)
T ss_dssp             EEEEECCSEEHHHHHTTC-C-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             EEEEeecCCchhhhcccc-c-----------------ccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccc
Confidence            677788899999998653 2                 9999999999999999999999999999996            


Q ss_pred             -ccCCCcceeeeccCCccccccccccccccccCC-CCccccee
Q psy12228        215 -FIGFDLCILVFFHDSTLLKTTSTIASLILRNQK-VSVLLDLI  255 (258)
Q Consensus       215 -i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~Dv~  255 (258)
                       ++|||++...........||+.|+|||++.+.. ++.++||-
T Consensus       161 kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~Diw  203 (348)
T d2gfsa1         161 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW  203 (348)
T ss_dssp             EECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHH
T ss_pred             cccccchhcccCcccccccccccccCchhhcCCccCCcccchh
Confidence             679999987666667889999999999977754 58999973

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-31  Score=226.40  Aligned_cols=165  Identities=17%  Similarity=0.186  Sum_probs=137.8

Q ss_pred             eeeeecCceEEEEEEEcccccCCceEEEEEEEecCCC---ChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEE
Q psy12228         72 YVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGH---SDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVI  148 (258)
Q Consensus        72 ~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv  148 (258)
                      ..||+|+||+||+|....  ...+++.||||+++...   .....+.+.+|+.+|+++.+||||+++++++.+...++++
T Consensus        30 ~~IG~G~fg~Vy~~~~~~--~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v  107 (322)
T d1vzoa_          30 KVLGTGAYGKVFLVRKIS--GHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLI  107 (322)
T ss_dssp             EEEEETTTEEEEEEEECS--STTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEecCCCeEEEEEEECc--cCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeee
Confidence            389999999999998741  12467899999996432   1223456889999999994448999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCcc-------------c
Q psy12228        149 VEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAVR-------------F  215 (258)
Q Consensus       149 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~DlK-------------i  215 (258)
                      |||+.+|+|.+++.....                 +++..+..++.||+.||.|||+++|+|||||             +
T Consensus       108 ~e~~~~~~L~~~i~~~~~-----------------~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL  170 (322)
T d1vzoa_         108 LDYINGGELFTHLSQRER-----------------FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVL  170 (322)
T ss_dssp             ECCCCSCBHHHHHHHHSC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             eecccccHHHHHHHhccc-----------------ccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEE
Confidence            999999999999998876                 8999999999999999999999999999996             7


Q ss_pred             cCCCcceeeeccC----CccccccccccccccccC--CCCccccee
Q psy12228        216 IGFDLCILVFFHD----STLLKTTSTIASLILRNQ--KVSVLLDLI  255 (258)
Q Consensus       216 ~dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~--~~s~~~Dv~  255 (258)
                      +|||+++......    ....|++.|+|||.+.+.  .++.++||-
T Consensus       171 ~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIW  216 (322)
T d1vzoa_         171 TDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWW  216 (322)
T ss_dssp             SCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHH
T ss_pred             eeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhH
Confidence            8999998654432    467899999999999764  468899973

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=7.6e-27  Score=199.27  Aligned_cols=162  Identities=14%  Similarity=0.085  Sum_probs=129.9

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhc----------CCCcccceeeeEEc-
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIG----------QHINIINLLGVCTQ-  141 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----------~h~nIv~l~~~~~~-  141 (258)
                      +||+|+||.||+|+..     .+++.||||+++..  ....+.+.+|+.+++.+.          .|+||+++++++.. 
T Consensus        20 ~LG~G~fg~Vy~~~~~-----~~g~~vAvKvi~~~--~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          20 KLGWGHFSTVWLAKDM-----VNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             EEEECSSEEEEEEEET-----TTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             EEeeCCCeEEEEEEEC-----CCCCEEEEEEEecc--ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            8999999999999987     67899999999853  334467888999888872          25789999998864 


Q ss_pred             -CCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCccccCcc-----
Q psy12228        142 -DGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQS-RKVGNDAVR-----  214 (258)
Q Consensus       142 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~iiH~DlK-----  214 (258)
                       ....+++++++..+...........              ...+++..+..++.||+.||+|||+ +||+|||||     
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIl  158 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYE--------------HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL  158 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTT--------------TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEE
T ss_pred             cccceeeeeeeccccccccccccccc--------------ccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHee
Confidence             3456777777665543333333221              1448999999999999999999998 899999996     


Q ss_pred             --------------ccCCCcceeeeccCCccccccccccccccccCCCCccccee
Q psy12228        215 --------------FIGFDLCILVFFHDSTLLKTTSTIASLILRNQKVSVLLDLI  255 (258)
Q Consensus       215 --------------i~dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv~  255 (258)
                                    ++|||.+..........+||+.|+|||++.+..|+.++||-
T Consensus       159 l~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  213 (362)
T d1q8ya_         159 MEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIW  213 (362)
T ss_dssp             EEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHH
T ss_pred             eeccCcccccceeeEeecccccccccccccccccccccChhhccccCCCcccccc
Confidence                          67899988766666788999999999999999999999973

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.83  E-value=1.8e-20  Score=145.56  Aligned_cols=119  Identities=13%  Similarity=0.102  Sum_probs=91.7

Q ss_pred             eeeeeecCceEEEEEEEcccccCCceEEEEEEEecCCCC-----------------hHHHHHHHHHHHHHHHhcCCCccc
Q psy12228         71 EYVKIKCAFGKVICAEANGILKQGIITTVAVKMLKEGHS-----------------DAEMMDLVSEMEMMKMIGQHINII  133 (258)
Q Consensus        71 ~~~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----------------~~~~~~~~~E~~~l~~l~~h~nIv  133 (258)
                      ..+||+|+||.||+|...      ++..||||+++....                 ........+|...+.++ .|.+++
T Consensus         5 g~~IG~G~~g~Vy~a~~~------~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~v~   77 (191)
T d1zara2           5 GKLMGEGKESAVFNCYSE------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QGLAVP   77 (191)
T ss_dssp             EEEEEECSSEEEEEEEET------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TTSSSC
T ss_pred             CCEeeeCcceEEEEEECC------CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cCCCcc
Confidence            458999999999999874      568999998764211                 01123456788999999 999999


Q ss_pred             ceeeeEEcCCcEEEEEEeCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCccccCc
Q psy12228        134 NLLGVCTQDGPLYVIVEFAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKVGNDAV  213 (258)
Q Consensus       134 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~iiH~Dl  213 (258)
                      ..+++.    ..+++|||++++.+.+                        ++......++.|++.||.|||++||+||||
T Consensus        78 ~~~~~~----~~~lvme~~~~~~~~~------------------------l~~~~~~~i~~ql~~~l~~lH~~giiHrDi  129 (191)
T d1zara2          78 KVYAWE----GNAVLMELIDAKELYR------------------------VRVENPDEVLDMILEEVAKFYHRGIVHGDL  129 (191)
T ss_dssp             CEEEEE----TTEEEEECCCCEEGGG------------------------CCCSCHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             eEEEec----CCEEEEEeeccccccc------------------------hhhHHHHHHHHHHHHHHHHHhhCCEEEccC
Confidence            887653    2379999999854421                        444556789999999999999999999999


Q ss_pred             c------------ccCCCcceee
Q psy12228        214 R------------FIGFDLCILV  224 (258)
Q Consensus       214 K------------i~dfgl~~~~  224 (258)
                      |            ++|||+|+..
T Consensus       130 KP~NILv~~~~~~liDFG~a~~~  152 (191)
T d1zara2         130 SQYNVLVSEEGIWIIDFPQSVEV  152 (191)
T ss_dssp             STTSEEEETTEEEECCCTTCEET
T ss_pred             ChhheeeeCCCEEEEECCCcccC
Confidence            7            6899998753

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.85  E-value=0.0016  Score=50.51  Aligned_cols=100  Identities=14%  Similarity=0.082  Sum_probs=69.6

Q ss_pred             ceEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEEeCCCCCHH
Q psy12228         79 FGKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVEFAPHGNLR  158 (258)
Q Consensus        79 fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~  158 (258)
                      -+.||+....       +..+.+|..... .......+.+|...+..+..+-.+.+++.+..+++..++||+++++.++.
T Consensus        27 ~~~v~rv~~~-------~~~~vlk~~~~~-~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~   98 (263)
T d1j7la_          27 PAKVYKLVGE-------NENLYLKMTDSR-YKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS   98 (263)
T ss_dssp             SSEEEEEECS-------SCEEEEEEECGG-GTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred             CCcEEEEEeC-------CCeEEEEEcCCC-cccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccc
Confidence            3588977543       356778877543 11122346788999888866655778888888888899999999998886


Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        159 DFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       159 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      +.....                      .....++.+++..+..||+...
T Consensus        99 ~~~~~~----------------------~~~~~~~~~l~~~l~~lH~~~~  126 (263)
T d1j7la_          99 EEYEDE----------------------QSPEKIIELYAECIRLFHSIDI  126 (263)
T ss_dssp             HHTTTC----------------------SCHHHHHHHHHHHHHHHHTSCC
T ss_pred             cccccc----------------------ccHHHHHHHHHHHHHHHhccCc
Confidence            654321                      1234467788888999998654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=95.02  E-value=0.038  Score=45.37  Aligned_cols=84  Identities=11%  Similarity=-0.056  Sum_probs=51.3

Q ss_pred             eeeecCceEEEEEEEcccccCCceEEEEEEEecCC------CChHHHHHHHHHHHHHHHhcCC--CcccceeeeEEcCCc
Q psy12228         73 VKIKCAFGKVICAEANGILKQGIITTVAVKMLKEG------HSDAEMMDLVSEMEMMKMIGQH--INIINLLGVCTQDGP  144 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~~~E~~~l~~l~~h--~nIv~l~~~~~~~~~  144 (258)
                      .||.|....||+....     ..++.++||.-...      .......+...|.+.|..++.+  ..+++++.+  +++.
T Consensus        33 eig~G~~N~vfrV~~~-----~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~  105 (392)
T d2pula1          33 EIGDGNLNYVFHIYDQ-----EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEM  105 (392)
T ss_dssp             ECCSSSSEEEEEEEC---------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTT
T ss_pred             EeCCCceEeEEEEEeC-----CCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCC
Confidence            5788999999998765     34578899965321      0111223455788888877554  345556554  4455


Q ss_pred             EEEEEEeCCCCCH-HHHHhh
Q psy12228        145 LYVIVEFAPHGNL-RDFLRK  163 (258)
Q Consensus       145 ~~lv~e~~~~g~L-~~~l~~  163 (258)
                      .++|||++++..+ ...+..
T Consensus       106 ~~lvmE~L~~~~~~~~~l~~  125 (392)
T d2pula1         106 AVTVMEDLSHLKIARKGLIE  125 (392)
T ss_dssp             TEEEECCCTTSEEHHHHHHH
T ss_pred             CEEEEeccCCcccchhhhcc
Confidence            6899999987544 444443

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.93  E-value=0.094  Score=39.62  Aligned_cols=98  Identities=17%  Similarity=0.150  Sum_probs=63.5

Q ss_pred             eecCc-eEEEEEEEcccccCCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCC-CcccceeeeEEcCCcEEEEEEeC
Q psy12228         75 IKCAF-GKVICAEANGILKQGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQH-INIINLLGVCTQDGPLYVIVEFA  152 (258)
Q Consensus        75 g~G~f-g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-~nIv~l~~~~~~~~~~~lv~e~~  152 (258)
                      ..|.. +.||+....      .+..+++|.......    ..+..|...++.+..+ -.+.+++++..+++..++||+++
T Consensus        19 ~~G~s~~~v~r~~~~------~~~~~vlK~~~~~~~----~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i   88 (255)
T d1nd4a_          19 TIGCSDAAVFRLSAQ------GRPVLFVKTDLSGAL----NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV   88 (255)
T ss_dssp             SCTTSSCEEEEEECT------TSCCEEEEEECSCTT----SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred             CCcccCCeEEEEEeC------CCCEEEEEeCCccCH----hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEee
Confidence            34443 578887754      345688898765421    2366788888776333 23567888888888899999999


Q ss_pred             CCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q psy12228        153 PHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRK  207 (258)
Q Consensus       153 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~  207 (258)
                      +|-++.+     .                 ..+..   ..+.+++..|.-||+..
T Consensus        89 ~G~~~~~-----~-----------------~~~~~---~~~~~l~~~la~LH~~~  118 (255)
T d1nd4a_          89 PGQDLLS-----S-----------------HLAPA---EKVSIMADAMRRLHTLD  118 (255)
T ss_dssp             SSEETTT-----S-----------------CCCHH---HHHHHHHHHHHHHTTSC
T ss_pred             ecccccc-----c-----------------cccHH---HHHHHHHHHHHHHccCC
Confidence            9855422     0                 13322   23457778888889754

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=81.88  E-value=2.6  Score=33.66  Aligned_cols=104  Identities=13%  Similarity=0.145  Sum_probs=64.1

Q ss_pred             eeeecCceEEEEEEEccccc--CCceEEEEEEEecCCCChHHHHHHHHHHHHHHHhcCCCcccceeeeEEcCCcEEEEEE
Q psy12228         73 VKIKCAFGKVICAEANGILK--QGIITTVAVKMLKEGHSDAEMMDLVSEMEMMKMIGQHINIINLLGVCTQDGPLYVIVE  150 (258)
Q Consensus        73 ~ig~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~nIv~l~~~~~~~~~~~lv~e  150 (258)
                      .|+.|-.-.+|++.......  ...+..|.+++.-....  . -...+|..+++.++.+.-..++++++..    .+|+|
T Consensus        49 ~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~--~-idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          49 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--E-SHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--H-HHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcch--h-hHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            45566667899988652111  12345677887753222  2 2355899999988666545578887742    58999


Q ss_pred             eCCCCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Q psy12228        151 FAPHGNLRDFLRKHRPSSGYESPLGSAYTNGNVLTEKDLISFAYQVANGMHYLQSRKV  208 (258)
Q Consensus       151 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~i  208 (258)
                      |+++-.|..                         .......++.+++..|+-+|...+
T Consensus       122 fi~g~~l~~-------------------------~d~~~~~~~~~iA~~La~lH~~~~  154 (395)
T d1nw1a_         122 YIPSRPLSC-------------------------HEISLAHMSTKIAKRVAKVHQLEV  154 (395)
T ss_dssp             CCCEEECCT-------------------------TGGGSHHHHHHHHHHHHHHTTCCC
T ss_pred             EeccccCCh-------------------------hhccchhhhHHHHHHHHHHhhccc
Confidence            998744321                         011112466778888888997643