RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12232
(202 letters)
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 65.0 bits (159), Expect = 7e-13
Identities = 29/48 (60%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPL 51
Y +MRDCW V S+RP F QLV LDRILT+T NE EYL+L PL
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE----EYLDLSQPL 332
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 61.2 bits (149), Expect = 2e-11
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLDTPPSSEDESN 63
Y +MRDCW V S+RP F QLV LDRI+ +T+N+ +G + D P + N
Sbjct: 323 YMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYYHHHHHHD-YDIPTTENLYFN 381
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 59.7 bits (145), Expect = 4e-11
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLDTPPSSEDE 61
Y +M CW + +RP F ++ +++ + + P+ P E+E
Sbjct: 316 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ-------DPDVINTALPIEYGPLVEEEE 366
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 58.9 bits (143), Expect = 9e-11
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLDTPPSSEDE 61
Y +M CW + +RP F ++ +++ + + P+ P E+E
Sbjct: 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDP-------DVINTALPIEYGPLVEEEE 325
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 58.2 bits (141), Expect = 2e-10
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLD 53
YE+M CW A RP F +LVS++ I + E Y+ + A ++
Sbjct: 326 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE----HYVHVNATYVN 371
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 56.9 bits (138), Expect = 5e-10
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLEL 47
Y++M+ CW + RP F LV ++++I++ + Y++L
Sbjct: 258 YQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD----HYVQL 297
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 56.2 bits (136), Expect = 8e-10
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANE 38
Y +MRDCW V S+RP F QLV LDRILT+T NE
Sbjct: 335 YMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE 369
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 55.7 bits (135), Expect = 9e-10
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
Y+LMR CW +RP F L S L+ T T +Y
Sbjct: 240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQY 275
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 55.7 bits (135), Expect = 1e-09
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANE 38
Y+ M DCW S+RP F +LV L +L A +
Sbjct: 281 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 55.3 bits (134), Expect = 1e-09
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
YE+M CW A RP F +LVS++ I + E+
Sbjct: 262 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 297
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 55.5 bits (134), Expect = 2e-09
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQ 42
Y +M CW ERP F + S LD T T ++Y
Sbjct: 415 YNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQYEEI 453
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 55.3 bits (134), Expect = 2e-09
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANE 38
Y++M+ CW +RP F Q+V +++ ++ + N
Sbjct: 278 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 312
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 55.4 bits (134), Expect = 2e-09
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLEL 47
Y +M+ CW++ + +RP F L S L L Y +
Sbjct: 305 YIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE----AMYQNV 344
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 55.4 bits (134), Expect = 2e-09
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLDTPPSSEDES 62
Y+LMR CW ERP F Q++ L+R+L Y+ E + S+E+ +
Sbjct: 271 YDLMRQCWREKPYERPSFAQILVSLNRMLE-ERKTYVNTTLYE-KFTYAGIDCSAEEAA 327
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 54.3 bits (131), Expect = 3e-09
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLDTPPSSEDESN 63
Y +M CW A RP+F +L+ + ++ Q YL ++ PS D +
Sbjct: 249 YMIMVKCWMIDADSRPKFRELIIEFSKMARDP------QRYLVIQGDERMHLPSPTDSNF 302
Query: 64 DD 65
Sbjct: 303 YR 304
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 53.9 bits (130), Expect = 4e-09
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQE--YLELEAP 50
Y+LM CWS +RP F L +L+ IL + Q+ Y+ +E
Sbjct: 269 YDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYINIERA 317
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 54.2 bits (130), Expect = 5e-09
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLEL 47
Y LM DCW Y +RP+F+ + ++ A++ G LE+
Sbjct: 569 YALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGSALEV 612
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 53.7 bits (129), Expect = 7e-09
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
++LM CW ERP F L + L+ T T +Y
Sbjct: 494 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 529
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 53.0 bits (128), Expect = 1e-08
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEA 49
Y +MR CW A RP+F +L+ + ++ Q YL ++
Sbjct: 249 YMIMRKCWMIDADSRPKFRELIIEFSKMARDP------QRYLVIQG 288
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 52.7 bits (127), Expect = 1e-08
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
Y +M+ CW+ + RP F Q+ S L E
Sbjct: 297 YSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRER 332
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 52.6 bits (127), Expect = 1e-08
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILT 33
Y LM CW +RP F + L++++
Sbjct: 282 YRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 52.8 bits (127), Expect = 1e-08
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
++LM CW ERP F L + L+ T T +Y
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 446
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 52.2 bits (126), Expect = 2e-08
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
YELMR CW + S+RP F ++ + + ++
Sbjct: 242 YELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 52.0 bits (125), Expect = 2e-08
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
+ELM+ CW+ +RP F L +LD + + +
Sbjct: 274 HELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCE 309
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 51.5 bits (124), Expect = 3e-08
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEY 44
Y LM DCW Y +RP+F+ + ++ A++ G +
Sbjct: 243 YALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHH 283
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 51.2 bits (123), Expect = 4e-08
Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 12/75 (16%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLL------DTPPS 57
Y +M CW + RP F +L ++ R+ YL ++ P
Sbjct: 247 YMVMVKCWMIDENIRPTFKELANEFTRMARDP------PRYLVIKRESGPGIAPGPEPHG 300
Query: 58 SEDESNDDEETCAYL 72
++ ++ E L
Sbjct: 301 LTNKKLEEVELEPEL 315
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 51.3 bits (123), Expect = 4e-08
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
YELMR CW + S+RP F ++ + + ++
Sbjct: 449 YELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 484
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 50.7 bits (122), Expect = 4e-08
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILT 33
YE+M++CW A+ RP F+QL +L+ I T
Sbjct: 244 YEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 50.7 bits (122), Expect = 5e-08
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEY 44
Y+LM CW+Y RP F + +L NE +
Sbjct: 250 YDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEGHHHHH 290
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 50.8 bits (122), Expect = 5e-08
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLEL 47
Y +MR CW +R + ++L + YL++
Sbjct: 290 YAIMRGCWQREPQQRHSIKDVHARLQALAQAP------PVYLDV 327
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 50.7 bits (122), Expect = 5e-08
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
Y LM CW Y S+RP F +LV L + + +
Sbjct: 244 YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 279
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 50.8 bits (122), Expect = 6e-08
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLDTP 55
Y+LM CW + RP+F +VS LD+++ + ++ + L +
Sbjct: 280 YQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLPST 331
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 50.8 bits (122), Expect = 6e-08
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLDTPPSSEDESN 63
+ELMR CW Y RP F++++S + + + E+ + E E
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSIKEEME--------PGFREVSFYYSEENKLPEPEEL 321
Query: 64 D 64
D
Sbjct: 322 D 322
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 50.3 bits (121), Expect = 6e-08
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVT 35
Y++M CW +R ++ L + T
Sbjct: 265 YDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 50.0 bits (120), Expect = 1e-07
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
Y LM++CW AS RP F L+ L + +
Sbjct: 281 YHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQA 316
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 50.0 bits (120), Expect = 1e-07
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRIL 32
Y LMR CWS + ++RP F + L R+
Sbjct: 306 YNLMRLCWSKLPADRPSFCSIHRILQRMC 334
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 50.0 bits (120), Expect = 1e-07
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILT 33
YE+M CW +RP F L +L+++L
Sbjct: 279 YEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 49.5 bits (119), Expect = 1e-07
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANE 38
Y LM CW+Y S RP F +L ++L IL +
Sbjct: 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 281
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 50.0 bits (120), Expect = 1e-07
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILT 33
Y++M++CW A+ RP F+QL +L+ I T
Sbjct: 416 YDVMKNCWHLDAATRPTFLQLREQLEHIRT 445
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 49.7 bits (119), Expect = 1e-07
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTA 36
Y +M +CW+ ++RP F L ++D+I A
Sbjct: 293 YMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 49.5 bits (118), Expect = 1e-07
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTA 36
Y+ M DCW S+RP F +LV L +L A
Sbjct: 326 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 358
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 48.8 bits (117), Expect = 2e-07
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY 39
++LM DCW ++RP F Q+VS LD ++ +
Sbjct: 284 HQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLR 319
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 48.4 bits (116), Expect = 3e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRIL 32
Y +M CW A ERP F L+S + ++
Sbjct: 251 YTIMYSCWHEKADERPTFKILLSNILDVM 279
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 49.1 bits (117), Expect = 3e-07
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILT 33
Y LM CW+Y S RP F +L ++L IL
Sbjct: 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 651
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 48.5 bits (116), Expect = 3e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRIL 32
Y+LMR CW + S R F L+ + +L
Sbjct: 273 YQLMRKCWEFQPSNRTSFQNLIEGFEALL 301
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 48.0 bits (115), Expect = 4e-07
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILT 33
Y++M CW +RP F +L+ +L I
Sbjct: 235 YQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 48.0 bits (115), Expect = 5e-07
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRIL 32
Y++M CW + +RP F QL+S ++ +
Sbjct: 235 YQIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 48.1 bits (115), Expect = 5e-07
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRIL 32
Y+LM DCW + RP+F Q+VS LD+++
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 47.7 bits (114), Expect = 6e-07
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILT 33
L+ +C Y RP F ++ L+ + T
Sbjct: 246 ANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 47.7 bits (114), Expect = 7e-07
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILT 33
Y +M +CW+ ++RP F L ++D+I
Sbjct: 262 YMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 46.6 bits (111), Expect = 2e-06
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILTVTANEY-LGQEYLELEAPLLDTPPSSE 59
+ + C +RP F++L L+ + A LG + +L+ +T E
Sbjct: 253 FPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPLGPQLEQLDRGFWETYRRGE 309
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 45.7 bits (109), Expect = 3e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLD 29
Y LM +CW+ S RP F + S+L
Sbjct: 260 YALMIECWNEFPSRRPRFKDIHSRLR 285
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 45.7 bits (109), Expect = 3e-06
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRIL 32
+ LM CW+Y +RP F + +L I
Sbjct: 345 FRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 45.3 bits (108), Expect = 3e-06
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRI 31
Y +M CW++ +RP F+ L L
Sbjct: 255 YNVMVQCWAHKPEDRPTFVALRDFLLEA 282
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 43.9 bits (104), Expect = 1e-05
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRILT 33
L+ DC V ERP F Q++S ++ +
Sbjct: 271 KRLVADCVKKVKEERPLFPQILSSIELLQH 300
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 43.9 bits (103), Expect = 2e-05
Identities = 38/160 (23%), Positives = 57/160 (35%), Gaps = 31/160 (19%)
Query: 15 ASERPEFIQLVSKLDRILTVTANEYLG---QEYLELEAPLLDTPPSSEDESNDDEETCA- 70
F V K +L ++G E P PPS ++S ++ E
Sbjct: 286 TDSWESFFVSVRKAITVLF-----FIGVRCYEA----YPNTSLPPSILEDSLENNEGVPS 336
Query: 71 YLLESVIRISNLDGEQM-KYLIQVNPPGDILPEVIRAIILMQNITDAGILFDDSFIFDHK 129
+L ISNL EQ+ Y+ + N LP + I + N G + +
Sbjct: 337 PML----SISNLTQEQVQDYVNKTN---SHLPAGKQVEISLVN----G---AKNLVVSGP 382
Query: 130 YKSLLQ-NIPTRHIIAPVEDSRSVKRQLFRFKDLDIVNYF 168
+SL N+ R AP +S R F + L N F
Sbjct: 383 PQSLYGLNLTLRKAKAPSGLDQS--RIPFSERKLKFSNRF 420
Score = 28.5 bits (63), Expect = 1.8
Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 32/103 (31%)
Query: 16 SER-PEFIQLVSKLDRILTVTA---NEYLGQEYLELEAPLLDTPPSSEDESNDDEETCAY 71
SER +F R L V + + L P+S+ + D +
Sbjct: 410 SERKLKFSN------RFLPVASPFHSHLLV--------------PASDLINKDLVKNNVS 449
Query: 72 LLESVIRI---SNLDGEQMKYLIQVNPPGDILPEVIRAIILMQ 111
I+I DG ++ L G I ++ II +
Sbjct: 450 FNAKDIQIPVYDTFDGSDLRVL-----SGSISERIVDCIIRLP 487
Score = 26.9 bits (59), Expect = 6.3
Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 39/126 (30%)
Query: 73 LESVIRISNLDGEQMKYLIQVNPPGDILPEVIRAIILMQNITDAGILFDDSFIFDHKYKS 132
+ES++ + G +QV P D L +I + N F +
Sbjct: 1779 IESLVEVVFYRGM----TMQVAVPRDELGRSNYGMIAI-NPGRVAASFSQEAL------- 1826
Query: 133 LLQNIPTRHIIAPV-EDSRSVKRQLFRFKDLDIVNYFILGR----------LQTIKMILD 181
++++ V + + + ++IVNY + + L T+ +L+
Sbjct: 1827 -------QYVVERVGKRTGWL---------VEIVNYNVENQQYVAAGDLRALDTVTNVLN 1870
Query: 182 SANVNK 187
+ K
Sbjct: 1871 FIKLQK 1876
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 43.1 bits (102), Expect = 2e-05
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRIL 32
LM +C ERP F +++++++ +
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIEELA 287
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 42.7 bits (101), Expect = 3e-05
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRIL 32
+++ CW++ ERP F +L+ L+++
Sbjct: 273 SDILLFCWAFEQEERPTFTKLMDMLEKLP 301
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 42.3 bits (100), Expect = 4e-05
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 5 ELMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLDTPPSSEDESND 64
LM CWS S+RP ++V + ++ Y L+ P + P ED +
Sbjct: 235 SLMTRCWSKDPSQRPSMEEIVKIMTHLM-----RYFPGADEPLQYPCQHSLPPGEDGRVE 289
Query: 65 DEET 68
Sbjct: 290 PYVD 293
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 41.1 bits (97), Expect = 9e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 4 YELMRDCWSYVASERPEFIQLVSKLDRI 31
+LM DCW+ RP F ++ +L I
Sbjct: 244 AKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 40.4 bits (95), Expect = 2e-04
Identities = 6/29 (20%), Positives = 14/29 (48%)
Query: 5 ELMRDCWSYVASERPEFIQLVSKLDRILT 33
++ CW+ +RP F ++ L ++
Sbjct: 270 AIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 38.8 bits (91), Expect = 6e-04
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 5 ELMRDCWSYVASERPEFIQLVSKLDRI 31
++ CWS +RP F +V +L +
Sbjct: 261 NVIELCWSGDPKKRPHFSYIVKELSEL 287
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 38.0 bits (89), Expect = 0.001
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 5 ELMRDCWSYVASERPEFIQLVSKLDRI 31
+LM+ C + ++RP+F +V L+++
Sbjct: 242 KLMKICMNEDPAKRPKFDMIVPILEKM 268
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 36.6 bits (85), Expect = 0.003
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 5 ELMRDCWSYVASERPEFIQLVSKLDRI 31
+LM++CW S R +++ L +I
Sbjct: 274 KLMKECWYQNPSARLTALRIKKTLTKI 300
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 36.3 bits (84), Expect = 0.005
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 5 ELMRDCWSYVASERPEFIQLVSKLDRILT 33
+LM +CW++ + R +++ L ++
Sbjct: 303 KLMTECWAHNPASRLTALRVKKTLAKMSE 331
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 35.8 bits (83), Expect = 0.005
Identities = 6/29 (20%), Positives = 15/29 (51%)
Query: 5 ELMRDCWSYVASERPEFIQLVSKLDRILT 33
++MR+CW + R +++ L ++
Sbjct: 269 KIMRECWYANGAARLTALRIKKTLSQLSQ 297
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 35.9 bits (83), Expect = 0.005
Identities = 6/29 (20%), Positives = 15/29 (51%)
Query: 5 ELMRDCWSYVASERPEFIQLVSKLDRILT 33
++MR+CW + R +++ L ++
Sbjct: 308 KIMRECWYANGAARLTALRIKKTLSQLSQ 336
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 34.4 bits (78), Expect = 0.021
Identities = 36/233 (15%), Positives = 65/233 (27%), Gaps = 73/233 (31%)
Query: 7 MRDCWSYVASERPEFIQLVSKLD---RILTVTAN---------EYLGQEYLELEAPLLDT 54
+ + + + + + +IL T L+ + L T
Sbjct: 250 LLNVQN---------AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL-T 299
Query: 55 PPSSE-------DESNDD--EETCAY--LLESVIRISNLDGEQMK-------YLIQVNPP 96
P + D D E S+I E ++ VN
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII------AESIRDGLATWDNWKHVN-- 351
Query: 97 GDILPEVIRAIILMQNITDAGILFDDSFIFDHKYKSLLQNIPTR--HII---APVEDSRS 151
D L +I + + + + +FD +F S +IPT +I D
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSVFP---PSA--HIPTILLSLIWFDVIKSDVMV 406
Query: 152 VKRQLFRF----KDLDIVNYFILGRLQTI-----------KMILDSANVNKFF 189
V +L ++ K I + + I+D N+ K F
Sbjct: 407 VVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459
Score = 27.1 bits (59), Expect = 4.7
Identities = 24/195 (12%), Positives = 57/195 (29%), Gaps = 62/195 (31%)
Query: 11 WSYVASERPEFI--QLVSK--LDRILTVTANE---YLGQEYLELEAP----------LLD 53
W V + +L +++ E + YLEL+ ++D
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEK----QPKESTISIPSIYLELKVKLENEYALHRSIVD 451
Query: 54 T-------PPSSEDESNDDEETCAYL---LESVIRISNLDGEQMKYL----IQV------ 93
D+ +++ L+++ + +M +L ++
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS 511
Query: 94 ---NPPGDILPEVIRAIILMQNITDAGILFDDSFIFDHKYKSLLQNIPTRHIIAPVEDSR 150
N G IL + + I D + ++ ++L +P
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICD------NDPKYERLVNAILDFLP------------ 553
Query: 151 SVKRQLFRFKDLDIV 165
++ L K D++
Sbjct: 554 KIEENLICSKYTDLL 568
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 32.1 bits (73), Expect = 0.090
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 5 ELMRDCWSYVASERPEFIQLVSKLDRIL 32
E + DCW A R ++ ++
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMAELM 317
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 30.8 bits (70), Expect = 0.26
Identities = 6/31 (19%), Positives = 15/31 (48%)
Query: 5 ELMRDCWSYVASERPEFIQLVSKLDRILTVT 35
E + +CW + A R + ++ ++ +T
Sbjct: 290 ETIEECWDHDAEARLSAGCVGERITQMQRLT 320
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 30.2 bits (68), Expect = 0.54
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 12/54 (22%)
Query: 116 AGI------LFDDSFIFDHKYKSLLQNIPTRHIIAPVEDSRSVKRQLFRFKDLD 163
+GI LF+ ++ + K ++Q + + P E S+ Q FK
Sbjct: 902 SGIRLIEPELFNG---YNPEKKEMIQEVIVEEDLEPFEASKETAEQ---FKHQH 949
>1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble
monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A
{Vibrio cholerae} PDB: 3o44_A
Length = 721
Score = 29.8 bits (66), Expect = 0.58
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 51 LLDTPPSSEDESNDDEETCAYLLESVIRISNLDGEQMKYLIQVNPPGDILPEVIRAIILM 110
LL TP +E + LLE+ + L N + LP V I +
Sbjct: 101 LLFTPFDRTEEID------PALLEAPRTAALLGASGFASPAPANSETNTLPHVAFYISVN 154
Query: 111 QNITDAGILFDDSFIF-DHKYKSLLQNIPTRHIIAPVEDSRSVK 153
+ I+D F++S+++ + K +I V RS++
Sbjct: 155 RAISDEECTFNNSWLWKNEKGSRPFCKDANISLIYRVNLERSLQ 198
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1
phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A
{Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A*
1xtu_A* 1xtv_A* 3g6w_A*
Length = 216
Score = 26.9 bits (59), Expect = 4.0
Identities = 20/143 (13%), Positives = 46/143 (32%), Gaps = 18/143 (12%)
Query: 6 LMRDCWSYVASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLDTPPSSEDESNDD 65
+RD +++ F + + +L RIL Y L+ E ++TP + + D
Sbjct: 17 QLRD----KYTDQINFRKNLVRLGRILG-----YEISNTLDYEIVEVETPLGVKTKGVDI 67
Query: 66 EETCAYLLESVIRISNLDGEQMKYLIQVNPPGDILPEVIRAIILMQNITDAGILFDDSFI 125
+ ++ +++R + V P+ + +I + G
Sbjct: 68 TDLNNIVIINILR---------AAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMD 118
Query: 126 FDHKYKSLLQNIPTRHIIAPVED 148
YK + + +
Sbjct: 119 VYIYYKKIPDIRAKVDNVIIADP 141
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF
superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Length = 282
Score = 26.4 bits (57), Expect = 6.1
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
Query: 14 VASERPEFIQLVSKLDRILTVTANEYLGQEYLELEAPLLDTPPSSEDESNDDEETCAYLL 73
S+ ++ L+ K + Y + E + T D A+ +
Sbjct: 31 TNSDSSLYLDLMIK-----VLAGTVYEDPAHRENFSHRDSTYREEVRNEGRDWPANAHTM 85
Query: 74 ESVIRISNLDGEQMKYLIQVNPPGDIL 100
+ R+ N+ + ++ +I N PGD++
Sbjct: 86 IGIKRLENIR-QCVEDVIGNNVPGDLV 111
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell
adhesion; 2.00A {Clostridium histolyticum} PDB: 3jqx_A
Length = 121
Score = 25.3 bits (55), Expect = 9.8
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 55 PPSSEDESNDDEETCAYLLESVIRIS-NLDGEQMK--YLIQVNPPGDI 99
P +E E N+ +ET + + I +S ++ + + V PG++
Sbjct: 4 PIGTEKEPNNSKETASGPIVPGIPVSGTIENTSDQDYFYFDVITPGEV 51
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.139 0.401
Gapped
Lambda K H
0.267 0.0741 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,092,388
Number of extensions: 180237
Number of successful extensions: 385
Number of sequences better than 10.0: 1
Number of HSP's gapped: 382
Number of HSP's successfully gapped: 83
Length of query: 202
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 113
Effective length of database: 4,216,824
Effective search space: 476501112
Effective search space used: 476501112
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (24.9 bits)