RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy12239
         (785 letters)



>d1vqol1 c.12.1.1 (L:1-150) Ribosomal protein L15 (L15p) {Archaeon
           Haloarcula marismortui [TaxId: 2238]}
          Length = 150

 Score = 27.3 bits (60), Expect = 5.1
 Identities = 9/55 (16%), Positives = 21/55 (38%)

Query: 253 KVILVSLGGMKDLQELKKEKRKQNGLKVLDEDTIEIAKTMRPSSPPASAVDIIEA 307
              +   G   D++++ +E    + +KVL    +    T+        A + +E 
Sbjct: 81  VAEVEDGGFRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEG 135


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.135    0.398 

Gapped
Lambda     K      H
   0.267   0.0549    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,914,023
Number of extensions: 138668
Number of successful extensions: 304
Number of sequences better than 10.0: 1
Number of HSP's gapped: 304
Number of HSP's successfully gapped: 6
Length of query: 785
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 693
Effective length of database: 1,144,436
Effective search space: 793094148
Effective search space used: 793094148
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.1 bits)