Diaphorina citri psyllid: psy12243

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
MSTFMQLDQTHDPITCTTSFKDLRLFHNVVKDLPIIYFITPTYPRREQVAELTRLGQTLMHIPNLHWIVADDTLQCSPMISALLPKFGIPYTHIASPMPPVYRTNNAVPPRGVANRRAALAWIRSYVKSGVVYFGDDDNTFDLKLFDEIRDTKKISMFPVGLIGSYGISSPVLRKGNVIGFFDSWPAKRKFPVDMAGFAVNVDLILKHPNATMPYKAGYEEDRFISSLGVKLSDIEPKANNCSEVSENIFKVPSSNVMSQMVTHPNTNHTGRFITLFK
cccEEEEcccccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHcccccCEEEEEEccccccHHHHHHHccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHcccCEEcccEEEcccccEEEccEECccEEEEEEcccccccccccccccEEEEEHHccccccccccccccccHHHHHHHHcccccccccccccccEEEEEEccccccccccccccccccccccccccccc
**TFMQ*DQTHDPITCTTSFKDLRLFHNVVKDLPIIYFITPTYPRREQVAELTRLGQTLMHIPNLHWIVADDTLQCSPMISALLPKFGIPYTHIASPMPPVYRTNNAVPPRGVANRRAALAWIRSYVKSGVVYFGDDDNTFDLKLFDEIRDTKKISMFPVGLIGSYGISSPVLRKGNVIGFFDSWPAKRKFPVDMAGFAVNVDLILKHPNATMPYKAGYEEDRFISSLGVKLSDIEPKANNCSEVSENIFKV*******************RFITLFK
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MSTFMQLDQTHDPITCTTSFKDLRLFHNVVKDLPIIYFITPTYPRREQVAELTRLGQTLMHIPNLHWIVADDTLQCSPMISALLPKFGIPYTHIASPMPPVYRTNNAVPPRGVANRRAALAWIRSYVKSGVVYFGDDDNTFDLKLFDEIRDTKKISMFPVGLIGSYGISSPVLRKGNVIGFFDSWPAKRKFPVDMAGFAVNVDLILKHPNATMPYKAGYEEDRFISSLGVKLSDIEPKANNCSEVSENIFKVPSSNVMSQMVTHPNTNHTGRFITLFK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 Involved in the biosynthesis of L2/HNK-1 carbohydrate epitope on both glycolipids and glycoproteins. Substrates include asialo-orosomucoid (ASOR), paragloboside (lacto-N-neotetraosylceramide), Gal-beta-1,4-GlcNAc-beta-1,3-Gal-beta-1,4-Glc-pyridylamine and Gal-beta-1,3-GlcNAc-beta-1,3-Gal-beta-1,4-Glc-pyridylamine.confidentQ9Z137
Probable glucuronosyltransferase sqv-8 May be involved in the biosynthesis of the HNK-1 carbohydrate epitope on glycoproteins. Also involved in wild-type vulval invagination.confidentQ09363
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 Glycosaminoglycans biosynthesis. Involved in forming the linkage tetrasaccharide present in heparan sulfate and chondroitin sulfate. Transfers a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region trisaccharide Gal-beta-1,3-Gal-beta-1,4-Xyl covalently bound to a Ser residue at the glycosaminylglycan attachment site of proteoglycans. Can also play a role in the biosynthesis of l2/HNK-1 carbohydrate epitope on glycoproteins. Highest activity seen with Gal-beta-1,3-Gal-beta-O-R (where R=naphthalenemethanol or benzyl alcohol).confidentQ9WU47

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030204 [BP]chondroitin sulfate metabolic processprobableGO:0030203, GO:0006807, GO:0050654, GO:0009100, GO:0044710, GO:0044260, GO:0071704, GO:0009987, GO:0008150, GO:0008152, GO:0043436, GO:0044238, GO:1901564, GO:0006082, GO:0019538, GO:1901135, GO:0044237, GO:0043170, GO:0006029, GO:0006790, GO:0006022, GO:0044281
GO:1901576 [BP]organic substance biosynthetic processprobableGO:0071704, GO:0009058, GO:0008150, GO:0008152
GO:0044431 [CC]Golgi apparatus partprobableGO:0005737, GO:0005794, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0005575, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0046989 [MF]galactosyl beta-1,3 N-acetylgalactosamine beta-1,3-glucuronosyltransferase activityprobableGO:0003824, GO:0016740, GO:0003674, GO:0016757, GO:0016758, GO:0015020, GO:0008194
GO:0046988 [MF]asioloorosomucoid beta-1,3-glucuronosyltransferase activityprobableGO:0003824, GO:0016740, GO:0003674, GO:0016757, GO:0016758, GO:0015020, GO:0008194
GO:0046987 [MF]N-acetyllactosamine beta-1,3-glucuronosyltransferase activityprobableGO:0003824, GO:0016740, GO:0003674, GO:0016757, GO:0016758, GO:0015020, GO:0008194
GO:0008499 [MF]UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activityprobableGO:0003674, GO:0035250, GO:0003824, GO:0016740, GO:0008378, GO:0016757, GO:0016758, GO:0008194, GO:0048531
GO:0005975 [BP]carbohydrate metabolic processprobableGO:0044238, GO:0008150, GO:0008152, GO:0071704

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.4.-.-Glycosyltransferases.probable
2.4.1.-Hexosyltransferases.probable
2.4.1.135Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2D0J, chain A
Confidence level:very confident
Coverage over the Query: 32-263
View the alignment between query and template
View the model in PyMOL