BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12245
(189 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156543322|ref|XP_001606160.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Nasonia
vitripennis]
Length = 242
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/189 (92%), Positives = 183/189 (96%), Gaps = 1/189 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR+LRRYLYSR+K
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRDLRRYLYSRKKGGG 195
Query: 181 R-RSRSRSR 188
+ RSRSRS+
Sbjct: 196 KGRSRSRSK 204
>gi|307172750|gb|EFN64036.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|307174220|gb|EFN64865.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
Length = 240
Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 166/173 (95%), Positives = 171/173 (98%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVF+ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|193613212|ref|XP_001950331.1| PREDICTED: splicing factor U2af 38 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 249
Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 166/173 (95%), Positives = 170/173 (98%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL+SNVTDEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVSNVTDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE AE AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEHAEAAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR+YLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRKYLY 188
>gi|307197303|gb|EFN78595.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 166/173 (95%), Positives = 171/173 (98%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NVTDEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVTDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVF+ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|357618954|gb|EHJ71738.1| putative U2 snrnp auxiliary factor, small subunit [Danaus
plexippus]
Length = 227
Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/175 (95%), Positives = 173/175 (98%), Gaps = 1/175 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLI-SNVTDE 59
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL+ +NV+DE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVVANVSDE 75
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN
Sbjct: 76 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 135
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY+
Sbjct: 136 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYA 190
>gi|307170197|gb|EFN62583.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|332029584|gb|EGI69473.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/173 (95%), Positives = 171/173 (98%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|91089827|ref|XP_969424.1| PREDICTED: similar to AGAP002956-PA [Tribolium castaneum]
Length = 227
Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/173 (95%), Positives = 171/173 (98%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|328785395|ref|XP_397281.4| PREDICTED: splicing factor U2af 38 kDa subunit [Apis mellifera]
gi|340723033|ref|XP_003399903.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
terrestris]
gi|350423714|ref|XP_003493568.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
impatiens]
gi|380029135|ref|XP_003698237.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Apis florea]
gi|383858860|ref|XP_003704917.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Megachile
rotundata]
Length = 241
Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/173 (95%), Positives = 171/173 (98%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|307202736|gb|EFN82027.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/173 (95%), Positives = 171/173 (98%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|332020538|gb|EGI60953.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 355 bits (911), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 164/173 (94%), Positives = 171/173 (98%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVF+ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR+LRRYLY
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRDLRRYLY 188
>gi|17137284|ref|NP_477208.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|442624928|ref|NP_001259814.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
gi|14286185|sp|Q94535.2|U2AF1_DROME RecName: Full=Splicing factor U2af 38 kDa subunit; AltName: Full=U2
auxiliary factor 38 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|7296221|gb|AAF51512.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|16197991|gb|AAL13766.1| LD24048p [Drosophila melanogaster]
gi|220947574|gb|ACL86330.1| U2af38-PA [synthetic construct]
gi|440213060|gb|AGB92351.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
Length = 264
Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 163/173 (94%), Positives = 169/173 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|195470226|ref|XP_002087409.1| GE16227 [Drosophila yakuba]
gi|194173510|gb|EDW87121.1| GE16227 [Drosophila yakuba]
Length = 267
Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 163/173 (94%), Positives = 169/173 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|195350065|ref|XP_002041562.1| GM16679 [Drosophila sechellia]
gi|195575511|ref|XP_002077621.1| GD22967 [Drosophila simulans]
gi|194123335|gb|EDW45378.1| GM16679 [Drosophila sechellia]
gi|194189630|gb|EDX03206.1| GD22967 [Drosophila simulans]
Length = 263
Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 163/173 (94%), Positives = 169/173 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|194853379|ref|XP_001968154.1| GG24659 [Drosophila erecta]
gi|190660021|gb|EDV57213.1| GG24659 [Drosophila erecta]
Length = 266
Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 163/173 (94%), Positives = 169/173 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|239790945|dbj|BAH72001.1| ACYPI001339 [Acyrthosiphon pisum]
Length = 214
Score = 351 bits (900), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 163/169 (96%), Positives = 166/169 (98%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL+SNVTDEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVSNVTDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE AE AVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEHAEAAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 169
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 184
>gi|1621615|gb|AAB17271.1| U2 snRNP auxiliary factor [Drosophila melanogaster]
Length = 264
Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 162/173 (93%), Positives = 168/173 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGS L++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSDLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|242014352|ref|XP_002427855.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
gi|212512324|gb|EEB15117.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
Length = 253
Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/167 (96%), Positives = 165/167 (98%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTTLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|312381446|gb|EFR27193.1| hypothetical protein AND_06248 [Anopheles darlingi]
Length = 372
Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 133 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 192
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+A DLNNR
Sbjct: 193 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNNR 252
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 253 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 299
>gi|195155565|ref|XP_002018674.1| GL25824 [Drosophila persimilis]
gi|194114827|gb|EDW36870.1| GL25824 [Drosophila persimilis]
Length = 309
Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|225581058|gb|ACN94635.1| GA17536 [Drosophila miranda]
Length = 290
Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|198476714|ref|XP_001357453.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
gi|198137818|gb|EAL34522.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
Length = 289
Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|195114476|ref|XP_002001793.1| GI15018 [Drosophila mojavensis]
gi|193912368|gb|EDW11235.1| GI15018 [Drosophila mojavensis]
Length = 274
Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|194766557|ref|XP_001965391.1| GF24893 [Drosophila ananassae]
gi|190618001|gb|EDV33525.1| GF24893 [Drosophila ananassae]
Length = 267
Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|195386376|ref|XP_002051880.1| GJ17240 [Drosophila virilis]
gi|194148337|gb|EDW64035.1| GJ17240 [Drosophila virilis]
Length = 267
Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|195035315|ref|XP_001989123.1| GH10217 [Drosophila grimshawi]
gi|193905123|gb|EDW03990.1| GH10217 [Drosophila grimshawi]
Length = 273
Score = 341 bits (875), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|195434328|ref|XP_002065155.1| GK14823 [Drosophila willistoni]
gi|194161240|gb|EDW76141.1| GK14823 [Drosophila willistoni]
Length = 287
Score = 341 bits (875), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA NDLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|118781916|ref|XP_311943.3| AGAP002956-PA [Anopheles gambiae str. PEST]
gi|116129321|gb|EAA08115.3| AGAP002956-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+A DLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|170035423|ref|XP_001845569.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167877385|gb|EDS40768.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 217
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+A DLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|157114089|ref|XP_001657976.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108877446|gb|EAT41671.1| AAEL006713-PA [Aedes aegypti]
Length = 246
Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+A DLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|170063641|ref|XP_001867190.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167881198|gb|EDS44581.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 249
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT LL NLY+NPQNSAKSADGSHL++NV+DEE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE+A DLNNR
Sbjct: 76 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNNR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
WFGGRPVY+ELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
Sbjct: 136 WFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|290461985|gb|ADD24040.1| Splicing factor U2af 38 kDa subunit [Lepeophtheirus salmonis]
Length = 239
Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/173 (90%), Positives = 167/173 (96%), Gaps = 1/173 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSF+FKIGACRHG+RCSRIHNKPTFSQTI+L NLYINPQNSAKSADGSH+ ++V+D E
Sbjct: 16 VNCSFFFKIGACRHGERCSRIHNKPTFSQTIVLNNLYINPQNSAKSADGSHM-AHVSDRE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFED FVE EDKYGE+EEMNVCDNLGDHLVGNVYIKFRREEDAE+AV+DLNNR
Sbjct: 75 MQEHYDNFFEDCFVEAEDKYGEVEEMNVCDNLGDHLVGNVYIKFRREEDAERAVSDLNNR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WFGGRP+YAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR LY
Sbjct: 135 WFGGRPIYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRDLY 187
>gi|149286928|gb|ABR23363.1| U2 snRNP splicing factor small subunit [Ornithodoros parkeri]
Length = 268
Score = 331 bits (848), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 158/193 (81%), Positives = 170/193 (88%), Gaps = 14/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY NPQNSA++ADGSHL +N+T+EE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQTADGSHL-ANMTEEE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+DNFFEDVFVE EDKYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 75 MQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVADLNNR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMG-------------ECTRSGFCNFMHLKPISRE 167
WF G P+Y+ELSPVTDFREACCRQYEMG ECTRSGFCNFMHLKPISRE
Sbjct: 135 WFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRGKTASEECTRSGFCNFMHLKPISRE 194
Query: 168 LRRYLYSRRKRSS 180
LRR LY R++R S
Sbjct: 195 LRRELYGRKRRKS 207
>gi|321468463|gb|EFX79448.1| hypothetical protein DAPPUDRAFT_52589 [Daphnia pulex]
Length = 237
Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/178 (86%), Positives = 164/178 (92%), Gaps = 2/178 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHL--ISNVTD 58
VNCSFYFKIGACRHGDRCSRIHNKPTFSQTI L N Y+NPQN+ K+ADG+ + I ++D
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTICLQNFYVNPQNATKTADGTAVPGIVTMSD 75
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE QEH+DNFFEDVF ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN
Sbjct: 76 EEAQEHFDNFFEDVFAECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 135
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 176
NRWF GRPVYAELSPVTDFREACCRQYE+GECTRSGFCNFMHLKPISRELRR LY R+
Sbjct: 136 NRWFAGRPVYAELSPVTDFREACCRQYELGECTRSGFCNFMHLKPISRELRRELYGRK 193
>gi|391345692|ref|XP_003747118.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Metaseiulus
occidentalis]
Length = 229
Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 151/173 (87%), Positives = 164/173 (94%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILL NLY NPQN+A++ADGSH +N+T+EE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLQNLYHNPQNTAQTADGSH--TNMTEEE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+DNFFEDVFVE EDKYGEIEEMNVCDNLGDHLVGNVY+KFR+E+DAEKAV +LNNR
Sbjct: 74 MQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRKEDDAEKAVKELNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF GRPV AELSPVTDFREACCRQYEMGECTRSGFCNFMHL+PISRELR+ LY
Sbjct: 134 WFAGRPVVAELSPVTDFREACCRQYEMGECTRSGFCNFMHLRPISRELRKELY 186
>gi|427787701|gb|JAA59302.1| Putative u2 small nuclear riboprotein auxiliary factor 38
[Rhipicephalus pulchellus]
Length = 253
Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 155/186 (83%), Positives = 165/186 (88%), Gaps = 14/186 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY NPQNSA++ADGSHL +N+T+EE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQTADGSHL-ANMTEEE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+DNFFEDVFVE EDKYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 75 MQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVADLNNR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMG-------------ECTRSGFCNFMHLKPISRE 167
WF G P+Y+ELSPVTDFREACCRQYEMG ECTRSGFCNFMHLKPISRE
Sbjct: 135 WFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRSTAATEECTRSGFCNFMHLKPISRE 194
Query: 168 LRRYLY 173
LRR LY
Sbjct: 195 LRRELY 200
>gi|443704810|gb|ELU01671.1| hypothetical protein CAPTEDRAFT_164217 [Capitella teleta]
Length = 234
Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 147/182 (80%), Positives = 167/182 (91%), Gaps = 2/182 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHG+RCSR+HNKPTFSQT+LL NLYINPQN+A++ADGSH+I ++DE+
Sbjct: 16 VNCSFYFKIGACRHGERCSRLHNKPTFSQTMLLQNLYINPQNTAQTADGSHII--MSDEQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+HYD+FFE+VFVE EDKYGEIEEMNVCDNLGDHLVGNVYIKFR EE AEK V +LNNR
Sbjct: 74 VQQHYDDFFEEVFVELEDKYGEIEEMNVCDNLGDHLVGNVYIKFRSEESAEKGVEELNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF GRP+++ELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY R + S
Sbjct: 134 WFNGRPIHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRSRHSK 193
Query: 181 RR 182
R+
Sbjct: 194 RK 195
>gi|387914810|gb|AFK11014.1| splicing factor U2AF35 [Callorhinchus milii]
gi|392876968|gb|AFM87316.1| U2 small nuclear RNA auxiliary factor 1 [Callorhinchus milii]
gi|392879254|gb|AFM88459.1| splicing factor [Callorhinchus milii]
gi|392880418|gb|AFM89041.1| splicing factor [Callorhinchus milii]
Length = 269
Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 149/183 (81%), Positives = 162/183 (88%), Gaps = 2/183 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLNLY NPQN ++ADG H V D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNLYRNPQNCTQTADGFHCA--VGDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAVNDLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHEEDAEKAVNDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RR++S
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKSQ 193
Query: 181 RRS 183
++
Sbjct: 194 QQG 196
>gi|390478246|ref|XP_002761504.2| PREDICTED: uncharacterized protein LOC100415206 [Callithrix
jacchus]
Length = 933
Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 709 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 766
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 767 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 826
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 827 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 879
>gi|260831488|ref|XP_002610691.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
gi|229296058|gb|EEN66701.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
Length = 197
Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/174 (85%), Positives = 161/174 (92%), Gaps = 1/174 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ NLY NPQNSA++ADGSH +N++D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILMPNLYRNPQNSAQTADGSH-CNNISDVE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFE+VF E E+KYGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 75 MQEHYDNFFEEVFTELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVKDLNNR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 135 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 188
>gi|241556280|ref|XP_002399674.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
gi|215499705|gb|EEC09199.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
Length = 256
Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/186 (81%), Positives = 160/186 (86%), Gaps = 14/186 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY NPQNSA++ADGSH + EE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQTADGSHR-EKYSSEE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+DNFFEDVFVE EDKYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 75 MQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVADLNNR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMG-------------ECTRSGFCNFMHLKPISRE 167
WF G P+Y+ELSPVTDFREACCRQYEMG ECTRSGFCNFMHLKPISRE
Sbjct: 135 WFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRTTEASEECTRSGFCNFMHLKPISRE 194
Query: 168 LRRYLY 173
LRR LY
Sbjct: 195 LRRELY 200
>gi|301791706|ref|XP_002930821.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 290
Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 159/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH V+D E
Sbjct: 66 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCA--VSDVE 123
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 124 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 183
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 184 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 236
>gi|432930414|ref|XP_004081462.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 230
Score = 315 bits (806), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 144/188 (76%), Positives = 166/188 (88%), Gaps = 2/188 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQT+ +LN+Y NPQN+A+S +G + SNV+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTVAMLNIYRNPQNTAQSMEG--VTSNVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFR+EEDAEKA+ DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKEEDAEKAMLDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P++AELSPVTDFREACC QYE G CTR GFCNFMHLKPISR+LRR LY R++S
Sbjct: 134 WFNGQPIHAELSPVTDFREACCHQYETGGCTRGGFCNFMHLKPISRDLRRQLYGHRRKSR 193
Query: 181 RRSRSRSR 188
+R RSR R
Sbjct: 194 QRPRSRDR 201
>gi|426219497|ref|XP_004003958.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Ovis aries]
Length = 332
Score = 314 bits (805), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 159/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH V+D E
Sbjct: 98 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCA--VSDVE 155
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 156 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 215
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 216 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 268
>gi|351700683|gb|EHB03602.1| Splicing factor U2AF 35 kDa subunit [Heterocephalus glaber]
Length = 387
Score = 314 bits (805), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 176 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 233
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 234 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 293
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 294 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 346
>gi|281352323|gb|EFB27907.1| hypothetical protein PANDA_021410 [Ailuropoda melanoleuca]
Length = 178
Score = 314 bits (805), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 162/178 (91%), Gaps = 2/178 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 2 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 59
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RR++
Sbjct: 120 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRK 177
>gi|410896554|ref|XP_003961764.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 232
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 161/179 (89%), Gaps = 2/179 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNSA+SADG L V+D +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSADG--LTCAVSDMQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+D FFE+VF E E+KYGE+EEMN+CDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RRK+
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRKKG 192
>gi|4204470|gb|AAD13394.1| splicing factor U2AF35 [Takifugu rubripes]
Length = 211
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 161/178 (90%), Gaps = 2/178 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNSA+SADG L V+D +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSADG--LTCAVSDMQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+D FFE+VF E E+KYGE+EEMN+CDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RRK+
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRKK 191
>gi|47226948|emb|CAG05840.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 161/178 (90%), Gaps = 2/178 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNSA+SADG L V+D +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSADG--LTCAVSDMQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+D FFE+VF E E+KYGE+EEMN+CDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RRK+
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRKK 191
>gi|410896558|ref|XP_003961766.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 224
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 161/178 (90%), Gaps = 2/178 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNSA+SADG L V+D +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSADG--LTCAVSDMQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+D FFE+VF E E+KYGE+EEMN+CDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RRK+
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRKK 191
>gi|410896556|ref|XP_003961765.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 231
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 161/178 (90%), Gaps = 2/178 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNSA+SADG L V+D +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSADG--LTCAVSDMQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+D FFE+VF E E+KYGE+EEMN+CDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RRK+
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRKK 191
>gi|291224089|ref|XP_002732040.1| PREDICTED: U2 small nuclear RNA auxillary factor 1-like
[Saccoglossus kowalevskii]
Length = 244
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 164/179 (91%), Gaps = 2/179 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+LLN+Y NPQNSA++A+G+H ++D +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNVYQNPQNSAQTAEGTH--CGMSDVD 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQ+H+D+FFE+VF E +DKYGEIEEMNVCDN+GDHLVGNVY+KFR EEDAEKAVNDLNNR
Sbjct: 74 MQKHFDDFFEEVFTELDDKYGEIEEMNVCDNIGDHLVGNVYVKFRNEEDAEKAVNDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
WF G+P+ AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RR R+
Sbjct: 134 WFNGQPIRAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRVRT 192
>gi|395752868|ref|XP_002830790.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2, partial
[Pongo abelii]
Length = 323
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 99 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 156
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 157 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 216
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 217 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 269
>gi|197127859|gb|ACH44357.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127861|gb|ACH44359.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 159/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|68800128|ref|NP_001020374.1| splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]
gi|297287452|ref|XP_002803161.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Macaca mulatta]
gi|332872227|ref|XP_003319151.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
troglodytes]
gi|344294749|ref|XP_003419078.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Loxodonta africana]
gi|359323574|ref|XP_003640135.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|402862238|ref|XP_003895473.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Papio
anubis]
gi|46911414|emb|CAF29556.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|119629907|gb|EAX09502.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_b [Homo
sapiens]
gi|410206762|gb|JAA00600.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289262|gb|JAA23231.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 159/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|327268484|ref|XP_003219027.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 242
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 159/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|254939700|ref|NP_001157241.1| splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]
gi|348556405|ref|XP_003464013.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Cavia porcellus]
gi|148708397|gb|EDL40344.1| mCG14259, isoform CRA_b [Mus musculus]
gi|149043574|gb|EDL97025.1| rCG60540, isoform CRA_b [Rattus norvegicus]
Length = 239
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 159/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|126325215|ref|XP_001364583.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Monodelphis
domestica]
gi|395518569|ref|XP_003763432.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2
[Sarcophilus harrisii]
Length = 248
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 159/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|449268664|gb|EMC79513.1| Splicing factor U2AF 35 kDa subunit, partial [Columba livia]
Length = 222
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 159/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH V+D E
Sbjct: 2 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCA--VSDVE 59
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 120 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|355560252|gb|EHH16938.1| hypothetical protein EGK_13202, partial [Macaca mulatta]
gi|355747336|gb|EHH51833.1| hypothetical protein EGM_12135, partial [Macaca fascicularis]
Length = 226
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 159/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH V+D E
Sbjct: 2 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCA--VSDVE 59
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 120 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|350534948|ref|NP_001232170.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127858|gb|ACH44356.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 162/178 (91%), Gaps = 2/178 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HN+PTFS+TIL+ N+Y NPQNSA++ADGSH V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNRPTFSRTILIQNIYRNPQNSAQTADGSHCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY R ++
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRLRK 191
>gi|148223762|ref|NP_001089860.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus laevis]
gi|80477616|gb|AAI08559.1| MGC131026 protein [Xenopus laevis]
Length = 245
Score = 311 bits (798), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|345323475|ref|XP_001511817.2| PREDICTED: hypothetical protein LOC100080963 [Ornithorhynchus
anatinus]
Length = 350
Score = 311 bits (797), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 118 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 175
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 176 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 235
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 236 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 288
>gi|25072205|ref|NP_739566.1| splicing factor U2AF 26 kDa subunit [Mus musculus]
gi|56912216|ref|NP_001008775.1| splicing factor U2AF 26 kDa subunit [Rattus norvegicus]
gi|81912059|sp|Q7TP17.1|U2AF4_RAT RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName:
Full=Liver regeneration-related protein LRRG157/LRRG158;
AltName: Full=U2 auxiliary factor 26; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|81913106|sp|Q8BGJ9.1|U2AF4_MOUSE RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4
gi|24637023|gb|AAN63524.1|AF419339_1 U2 auxiliary factor 26 [Mus musculus]
gi|24637025|gb|AAN63525.1| U2 auxiliary factor 26 [Mus musculus]
gi|33086654|gb|AAP92639.1| Cb2-807 [Rattus norvegicus]
gi|38511878|gb|AAH60972.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|74145330|dbj|BAE36125.1| unnamed protein product [Mus musculus]
gi|148692061|gb|EDL24008.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|149056309|gb|EDM07740.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_d
[Rattus norvegicus]
Length = 220
Score = 311 bits (797), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 167/187 (89%), Gaps = 4/187 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHC--HVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 178
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY R R R
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGRGPRHR 193
Query: 179 SSRRSRS 185
S RS +
Sbjct: 194 SPPRSHT 200
>gi|113931334|ref|NP_001039113.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
gi|89268927|emb|CAJ81820.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 311 bits (796), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|138519996|gb|AAI35291.1| LOC733934 protein [Xenopus (Silurana) tropicalis]
Length = 241
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 15 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 72
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 73 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNNR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 133 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|29126228|ref|NP_803432.1| splicing factor U2AF 35 kDa subunit [Danio rerio]
gi|21105405|gb|AAM34646.1|AF506202_1 U2 small nuclear RNA auxiliary factor small subunit [Danio rerio]
Length = 249
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/174 (82%), Positives = 159/174 (91%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQN+A+SADG ++ V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSADG---LNAVSDVE 72
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNR
Sbjct: 73 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVINLNNR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 133 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 186
>gi|432116144|gb|ELK37266.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 244
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 20 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 77
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 78 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 137
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 138 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 190
>gi|112983840|ref|NP_001037756.1| uncharacterized protein LOC687575 [Rattus norvegicus]
gi|254939694|ref|NP_077149.2| splicing factor U2AF 35 kDa subunit isoform 1 [Mus musculus]
gi|348556403|ref|XP_003464012.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Cavia porcellus]
gi|17368837|sp|Q9D883.4|U2AF1_MOUSE RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|12849864|dbj|BAB28511.1| unnamed protein product [Mus musculus]
gi|26354106|dbj|BAC40683.1| unnamed protein product [Mus musculus]
gi|74181282|dbj|BAE29923.1| unnamed protein product [Mus musculus]
gi|76779398|gb|AAI05906.1| Similar to Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor
35 kDa subunit) (U2 snRNP auxiliary factor small
subunit) [Rattus norvegicus]
gi|109730851|gb|AAI15480.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|109732120|gb|AAI15481.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|148708396|gb|EDL40343.1| mCG14259, isoform CRA_a [Mus musculus]
gi|149043573|gb|EDL97024.1| rCG60540, isoform CRA_a [Rattus norvegicus]
Length = 239
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|395518567|ref|XP_003763431.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1
[Sarcophilus harrisii]
Length = 248
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|327268486|ref|XP_003219028.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Anolis carolinensis]
Length = 236
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|327268482|ref|XP_003219026.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 242
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|122692549|ref|NP_001073737.1| splicing factor U2AF 35 kDa subunit [Bos taurus]
gi|122703746|ref|NP_989986.2| splicing factor U2AF 35 kDa subunit [Gallus gallus]
gi|146325808|sp|A1A4K8.1|U2AF1_BOVIN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|13235096|emb|CAC33541.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235098|emb|CAC33542.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235100|emb|CAC33543.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|119223947|gb|AAI26639.1| U2 small nuclear RNA auxiliary factor 1 [Bos taurus]
gi|296490881|tpg|DAA32994.1| TPA: splicing factor U2AF 35 kDa subunit [Bos taurus]
Length = 237
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|5803207|ref|NP_006749.1| splicing factor U2AF 35 kDa subunit isoform a [Homo sapiens]
gi|297287450|ref|XP_001118538.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Macaca mulatta]
gi|332872225|ref|XP_001137466.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
troglodytes]
gi|344294747|ref|XP_003419077.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Loxodonta africana]
gi|359323572|ref|XP_003640134.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Canis
lupus familiaris]
gi|402862236|ref|XP_003895472.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Papio
anubis]
gi|410060371|ref|XP_003949235.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Pan troglodytes]
gi|267187|sp|Q01081.3|U2AF1_HUMAN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 small
nuclear RNA auxiliary factor 1; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|338263|gb|AAA36619.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|7768747|dbj|BAA95534.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|12654677|gb|AAH01177.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|12804941|gb|AAH01923.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|119629911|gb|EAX09506.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_d [Homo
sapiens]
gi|261861084|dbj|BAI47064.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
gi|410206760|gb|JAA00599.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289260|gb|JAA23230.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410331625|gb|JAA34759.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|12805423|gb|AAH02184.1| U2af1 protein, partial [Mus musculus]
Length = 238
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 15 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 72
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 73 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 133 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|431918574|gb|ELK17792.1| Splicing factor U2AF 26 kDa subunit [Pteropus alecto]
Length = 223
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/190 (76%), Positives = 169/190 (88%), Gaps = 4/190 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQT++LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 19 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTVVLLNLYRNPQNTAQTADGSHC--HVSDVE 76
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 77 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 136
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 178
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY + + R
Sbjct: 137 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGQGPKHR 196
Query: 179 SSRRSRSRSR 188
S RS++ R
Sbjct: 197 SPPRSQTHHR 206
>gi|354484665|ref|XP_003504507.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Cricetulus
griseus]
Length = 238
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 15 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 72
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 73 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 133 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|126329169|ref|XP_001363961.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Monodelphis domestica]
Length = 222
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/187 (77%), Positives = 166/187 (88%), Gaps = 2/187 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHC--HVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYD+FFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVTELNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+ V AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR+LRR LY R R
Sbjct: 134 WFNGQAVQAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLYGRGPRRR 193
Query: 181 RRSRSRS 187
S +R+
Sbjct: 194 GPSPTRA 200
>gi|348530872|ref|XP_003452934.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 238
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 143/173 (82%), Positives = 157/173 (90%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNSA+S DG L ++D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSVDG--LTCTISDTE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFR+EEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKEEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYE+GECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEIGECTRGGFCNFMHLKPISRELRRELY 186
>gi|223646168|gb|ACN09842.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672015|gb|ACN12189.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 244
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/173 (83%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQN+A+SADG + V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSADG--IRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+PV++ELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPVHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRDLY 186
>gi|432849900|ref|XP_004066668.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 228
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/173 (83%), Positives = 157/173 (90%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++AD S V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADASRCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|440895568|gb|ELR47720.1| Splicing factor U2AF 35 kDa subunit, partial [Bos grunniens mutus]
Length = 223
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 2 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 59
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 120 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|431901449|gb|ELK08471.1| Splicing factor U2AF 35 kDa subunit, partial [Pteropus alecto]
Length = 226
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 2 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 59
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 120 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|47220971|emb|CAF98200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 144/174 (82%), Positives = 157/174 (90%), Gaps = 2/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++AD S V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADASRCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 187
>gi|197692189|dbj|BAG70058.1| U2 small nuclear RNA auxillary factor 1 isoform a [Homo sapiens]
Length = 240
Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 145/173 (83%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHL+PISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLEPISRELRRELY 186
>gi|325303588|tpg|DAA34232.1| TPA_inf: U2 snRNP splicing factor small subunit [Amblyomma
variegatum]
Length = 192
Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 157/178 (88%), Gaps = 14/178 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY NPQNSA++ADGSHL +N+T+EE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQTADGSHL-ANMTEEE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+DNFFEDVFVE EDKYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 75 MQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVADLNNR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMG-------------ECTRSGFCNFMHLKPIS 165
WF G P+Y+ELSPVTDFREACCRQYEMG ECTRSGFCNFMH +PIS
Sbjct: 135 WFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRSTTATEECTRSGFCNFMHPQPIS 192
>gi|326913392|ref|XP_003203022.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Meleagris
gallopavo]
Length = 243
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 22 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 79
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 80 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 139
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 140 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 192
>gi|71051663|gb|AAH98601.1| U2af1 protein [Danio rerio]
Length = 250
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/174 (82%), Positives = 159/174 (91%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQN+A+SADG ++ V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSADG---LNAVSDVE 72
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
M+EHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNR
Sbjct: 73 MREHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVINLNNR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 133 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 186
>gi|223646964|gb|ACN10240.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672827|gb|ACN12595.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 227
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/173 (83%), Positives = 157/173 (90%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQN+A+SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREA CRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREAYCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|301771073|ref|XP_002920964.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Ailuropoda
melanoleuca]
gi|338709979|ref|XP_003362292.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2
[Equus caballus]
Length = 220
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/173 (82%), Positives = 160/173 (92%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSH--CHVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 186
>gi|311257402|ref|XP_003127103.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1 [Sus
scrofa]
Length = 220
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/173 (82%), Positives = 160/173 (92%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSH--CHVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 186
>gi|77736499|ref|NP_001029950.1| splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|426242747|ref|XP_004015232.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Ovis
aries]
gi|122146166|sp|Q3T127.1|U2AF4_BOVIN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|74354897|gb|AAI02152.1| Transmembrane protein 149 [Bos taurus]
gi|296477857|tpg|DAA19972.1| TPA: splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|440894920|gb|ELR47238.1| Splicing factor U2AF 26 kDa subunit [Bos grunniens mutus]
Length = 220
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/173 (82%), Positives = 161/173 (93%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSH--CHVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVVELNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR+LRR LY
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLY 186
>gi|348537122|ref|XP_003456044.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 227
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/174 (82%), Positives = 156/174 (89%), Gaps = 2/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++AD S V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADASRCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFR EEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRHEEDAEKAVMDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 187
>gi|432095948|gb|ELK26863.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 248
Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/172 (83%), Positives = 157/172 (91%), Gaps = 2/172 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NP+NS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPKNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDAFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR L
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRREL 185
>gi|156376577|ref|XP_001630436.1| predicted protein [Nematostella vectensis]
gi|156217457|gb|EDO38373.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 140/173 (80%), Positives = 158/173 (91%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTILL N+Y NPQ++A+ ADG+ + ++D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILLQNMYQNPQSAAQVADGTS--NAISDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
QEHYD FFEDVF+E E+KYGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAVNDLNNR
Sbjct: 74 AQEHYDRFFEDVFLELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVNDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
W+ G+P+YAELSPVTDFREACCRQYEMGECTR GFCNFMHL+PISR++RR LY
Sbjct: 134 WYNGQPIYAELSPVTDFREACCRQYEMGECTRGGFCNFMHLRPISRDVRRELY 186
>gi|410906167|ref|XP_003966563.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 235
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 158/179 (88%), Gaps = 6/179 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++AD S V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADASRCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGN FRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRREEDAEKAVMDLNNR 129
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY RR++S
Sbjct: 130 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKS 188
>gi|311334534|emb|CBN08648.1| U2 small nuclear RNA auxiliary factor 1 [Microcosmus squamiger]
Length = 206
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 155/178 (87%), Gaps = 6/178 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ-NSAKSADGSHLISNVTDE 59
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+L LY NPQ N+ +G V+D
Sbjct: 10 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIMLQGLYQNPQINNCAVPNGE-----VSDL 64
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
EMQEHYD FFE+VF E EDKYG+IEEMNVCDNLGDHLVGNVYIKF +EEDAEKAVNDLNN
Sbjct: 65 EMQEHYDEFFEEVFTELEDKYGDIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKAVNDLNN 124
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
RWF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISR+LRR LY RRK
Sbjct: 125 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRDLRRKLYGRRK 182
>gi|355755732|gb|EHH59479.1| U2 auxiliary factor 26 [Macaca fascicularis]
Length = 220
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 142/186 (76%), Positives = 165/186 (88%), Gaps = 4/186 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHC--HVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYD+FFE+VF E ++KYGEIEEMN+CD+LGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L R LY + R
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLWRQLYGQGPR-- 191
Query: 181 RRSRSR 186
RRS R
Sbjct: 192 RRSPPR 197
>gi|355703446|gb|EHH29937.1| U2 auxiliary factor 26 [Macaca mulatta]
Length = 220
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 137/173 (79%), Positives = 160/173 (92%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHC--HVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYD+FFE+VF E ++KYGEIEEMN+CD+LGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ LRR +Y
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVY 186
>gi|390354481|ref|XP_789191.3| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Strongylocentrotus purpuratus]
gi|390354483|ref|XP_003728344.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Strongylocentrotus purpuratus]
Length = 241
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/179 (77%), Positives = 156/179 (87%), Gaps = 5/179 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLI-----SN 55
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI++ N+Y NP N+A+SA+G + SN
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVIQNIYHNPANTAQSAEGGAAVGIADQSN 75
Query: 56 VTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVN 115
++D E+Q+H+D+FFE+VF E E KYGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAV
Sbjct: 76 LSDVEVQQHFDDFFEEVFAEMEQKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVE 135
Query: 116 DLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
DLNNRWF +P+ AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 136 DLNNRWFNRQPIRAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 194
>gi|12842455|dbj|BAB25609.1| unnamed protein product [Mus musculus]
Length = 239
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/165 (84%), Positives = 151/165 (91%), Gaps = 2/165 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 165
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPIS
Sbjct: 134 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 178
>gi|405969065|gb|EKC34075.1| Splicing factor U2AF 26 kDa subunit [Crassostrea gigas]
Length = 269
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/196 (72%), Positives = 159/196 (81%), Gaps = 23/196 (11%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLI------- 53
VNCSFYFKIGACRHG+RCSR+HNKPTFSQT+L+ NLY+NPQN+A +ADGSH++
Sbjct: 16 VNCSFYFKIGACRHGERCSRLHNKPTFSQTVLIENLYMNPQNTALTADGSHIVLDDVQGQ 75
Query: 54 ---------------SNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVG 98
+ D E+Q+ YD FFE+V+VE E KYGEIEEMNVCDNLGDHLVG
Sbjct: 76 QDFDDFFEEVFTELEDKMDDTELQQFYDEFFEEVYVELE-KYGEIEEMNVCDNLGDHLVG 134
Query: 99 NVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNF 158
NVY+KFR EEDAEKAVN+LNNRWF GRPV+AELSPVTDFREACCRQYEMGECTR GFCNF
Sbjct: 135 NVYVKFRYEEDAEKAVNELNNRWFNGRPVHAELSPVTDFREACCRQYEMGECTRGGFCNF 194
Query: 159 MHLKPISRELRRYLYS 174
MHLKPISRELRR LY
Sbjct: 195 MHLKPISRELRRELYG 210
>gi|410906165|ref|XP_003966562.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 223
Score = 295 bits (755), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 141/174 (81%), Positives = 153/174 (87%), Gaps = 6/174 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++AD S V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADASRCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGN FRREEDAEKAV DLNNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRREEDAEKAVMDLNNR 129
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 130 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 183
>gi|444514071|gb|ELV10521.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 229
Score = 294 bits (753), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 138/172 (80%), Positives = 151/172 (87%), Gaps = 2/172 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HN+PTFSQT+ LLN+Y NPQNS +SAD S +D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNRPTFSQTVALLNVYRNPQNSCQSADRSRCAG--SDAE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQ+HY FF++VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQQHYHEFFQEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVVDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
WF GRP+YAELSPVTDFREACCRQYE GEC R GFCNFMHLKPISRELRR L
Sbjct: 134 WFHGRPIYAELSPVTDFREACCRQYETGECARGGFCNFMHLKPISRELRREL 185
>gi|160358766|sp|Q8WU68.2|U2AF4_HUMAN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
protein 3; Short=U2 small nuclear RNA auxiliary factor
1-like protein 3; Short=U2AF1-like protein 3
Length = 220
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 135/173 (78%), Positives = 157/173 (90%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIG CRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 16 VNCSFYFKIGVCRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHC--HVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYD+FFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +L+NR
Sbjct: 74 VQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+ ELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L+R LY
Sbjct: 134 WFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLY 186
>gi|426378574|ref|XP_004055992.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like, partial
[Gorilla gorilla gorilla]
Length = 193
Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/181 (76%), Positives = 155/181 (85%), Gaps = 2/181 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSF FKIGAC HGDRCS +H+KPTFSQTI LLN+Y NPQN+++SADG L V+D E
Sbjct: 14 VNCSFDFKIGACLHGDRCSWLHHKPTFSQTIALLNIYCNPQNASQSADG--LRCAVSDVE 71
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF+E +KYGE+EEMNVCDNLGDHLVGNVY K REEDAEKAV DLNNR
Sbjct: 72 MQEHYDEFFEEVFIELGEKYGEVEEMNVCDNLGDHLVGNVYFKLPREEDAEKAVIDLNNR 131
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P++AELSPVTDFR ACCRQYEMGECTR GFCNFMHLKPISRELRR L +R++
Sbjct: 132 WFNGQPIHAELSPVTDFRGACCRQYEMGECTRGGFCNFMHLKPISRELRRELCGQRRKKH 191
Query: 181 R 181
R
Sbjct: 192 R 192
>gi|340377156|ref|XP_003387096.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Amphimedon
queenslandica]
Length = 227
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 133/174 (76%), Positives = 151/174 (86%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHG+RCSR+HNKPTFSQTI+L N+Y NP NS ++ G + V+ E
Sbjct: 16 VNCSFYFKIGACRHGERCSRLHNKPTFSQTIVLQNMYQNPNNSTQNPSG---LMTVSPEV 72
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q HY+ FFEDVF+ECE+KYG IE+MNVCDNLGDHLVGNVYIKFR EEDAEKAV LNNR
Sbjct: 73 EQAHYEEFFEDVFIECEEKYGPIEKMNVCDNLGDHLVGNVYIKFRFEEDAEKAVQSLNNR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WF G P++AELSPVTDF+EACCRQY+MGECTR GFCNFMHLKPISREL+R+LYS
Sbjct: 133 WFNGHPIHAELSPVTDFKEACCRQYDMGECTRGGFCNFMHLKPISRELKRFLYS 186
>gi|196016447|ref|XP_002118076.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
gi|190579379|gb|EDV19476.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
Length = 183
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 129/169 (76%), Positives = 152/169 (89%), Gaps = 1/169 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHG+RCSR+HNKPTFSQTI++ N++ NPQ++ + ADGS+ SN++DE+
Sbjct: 16 VNCSFYFKIGACRHGERCSRLHNKPTFSQTIVMQNIFQNPQHTVQLADGSYK-SNMSDED 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q+H+D+++ED+FVE E+KYGEIEEMNVCDNLGDHLVGNVY+KFR EE A AVN LNNR
Sbjct: 75 AQKHFDHYYEDIFVELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRSEEHASAAVNSLNNR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 169
WF G P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISR LR
Sbjct: 135 WFNGNPIFAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRSLR 183
>gi|403293028|ref|XP_003937526.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Saimiri boliviensis
boliviensis]
Length = 268
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/190 (71%), Positives = 163/190 (85%), Gaps = 4/190 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 64 VNCSFYLKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQNADGSH--CHVSDVE 121
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+HYD+FFE+VF E ++KYGEIEEMNV DNL +HLVGN+Y+KFRREEDAE+AV +L+NR
Sbjct: 122 LQQHYDSFFEEVFTELQEKYGEIEEMNVYDNLRNHLVGNIYVKFRREEDAERAVAELHNR 181
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 178
WF G+ V+A+LSPVTDF E+CC QYEMGECT+ GFCNFMHL+PISR LR+ LY R R R
Sbjct: 182 WFNGQGVHAKLSPVTDFWESCCHQYEMGECTQGGFCNFMHLRPISRNLRQQLYGRGPRCR 241
Query: 179 SSRRSRSRSR 188
S RS + R
Sbjct: 242 SPPRSHTGHR 251
>gi|226470094|emb|CAX70328.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486850|emb|CAX74502.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486852|emb|CAX74503.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489605|emb|CAX74953.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489607|emb|CAX74954.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 221
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/174 (82%), Positives = 160/174 (91%), Gaps = 2/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHG++CSR+HNKP+F QTILL NLYI PQN+A+SADGSH+ N+T+ +
Sbjct: 16 VNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSADGSHI--NLTEVQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q+ +D FFE+VFVECE+KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN R
Sbjct: 74 AQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNER 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WFGGRPV+AELSPVTDFREACCRQYE+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 134 WFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLYN 187
>gi|256088283|ref|XP_002580274.1| U2 snRNP auxiliary factor small subunit [Schistosoma mansoni]
gi|108861853|gb|ABG21828.1| U2 snRNP auxiliary factor small subunit-like protein [Schistosoma
mansoni]
gi|360043806|emb|CCD81352.1| putative u2 snRNP auxiliary factor, small subunit [Schistosoma
mansoni]
Length = 221
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/174 (82%), Positives = 160/174 (91%), Gaps = 2/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHG++CSR+HNKP+F QTILL NLYI PQN+A+SADGSH+ N+T+ +
Sbjct: 16 VNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSADGSHI--NLTEVQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q+ +D FFE+VFVECE+KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN R
Sbjct: 74 AQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNER 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WFGGRPV+AELSPVTDFREACCRQYE+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 134 WFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLYN 187
>gi|76156406|gb|AAX27612.2| SJCHGC07381 protein [Schistosoma japonicum]
Length = 219
Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/174 (82%), Positives = 160/174 (91%), Gaps = 2/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHG++CSR+HNKP+F QTILL NLYI PQN+A+SADGSH+ N+T+ +
Sbjct: 14 VNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSADGSHI--NLTEVQ 71
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q+ +D FFE+VFVECE+KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN R
Sbjct: 72 AQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNER 131
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WFGGRPV+AELSPVTDFREACCRQYE+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 132 WFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLYN 185
>gi|444511515|gb|ELV09911.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 218
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/168 (76%), Positives = 144/168 (85%), Gaps = 2/168 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCS YFK+GACRHGDRCS +HNKPTFSQTI+LLN+Y N NS+ SA G H V+D E
Sbjct: 16 VNCSSYFKLGACRHGDRCSGLHNKPTFSQTIVLLNIYRNLHNSSPSAGGLH--GAVSDAE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQ+HYD FF++VF E E+KYGE+EEMNVCDN GDHL GNVY+KFRREEDAEKAV DLNNR
Sbjct: 74 MQQHYDEFFKEVFTEMEEKYGEVEEMNVCDNAGDHLAGNVYVKFRREEDAEKAVMDLNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
WF +P+ AELSPVTDFREACCRQYEMGECT+ GFCN MHLKPISREL
Sbjct: 134 WFNRQPIRAELSPVTDFREACCRQYEMGECTQGGFCNLMHLKPISREL 181
>gi|358333982|dbj|GAA30118.2| splicing factor U2AF 35 kDa subunit [Clonorchis sinensis]
Length = 220
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/174 (82%), Positives = 160/174 (91%), Gaps = 2/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHG++CSR+HNKP+F QTILL NLYI PQN+A+SADGSH+ N+T+ +
Sbjct: 12 VNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSADGSHI--NLTEVQ 69
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q+ +D FFE+VFVECE+KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN R
Sbjct: 70 AQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNLR 129
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WFGGRPV+AELSPVTDFREACCRQYE+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 130 WFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLYN 183
>gi|93003154|tpd|FAA00160.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 218
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/185 (77%), Positives = 158/185 (85%), Gaps = 7/185 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHG+RCSR+HNKPTFSQTI+L LY NPQ + I V+D E
Sbjct: 21 VNCSFYFKIGACRHGERCSRLHNKPTFSQTIVLQGLYQNPQINNTG------IGTVSDVE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYDNFFE+VFVE E+KYG IEEMNVCDNLGDHLVGNVYIKF +EEDAEKAVNDLNNR
Sbjct: 75 MQEHYDNFFEEVFVELEEKYGSIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKAVNDLNNR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P+ +ELS VTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY R+++
Sbjct: 135 WFNGQPIMSELSTVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRRLYGRKEK-K 193
Query: 181 RRSRS 185
+RSRS
Sbjct: 194 KRSRS 198
>gi|326432262|gb|EGD77832.1| splicing factor U2af 38 kDa subunit [Salpingoeca sp. ATCC 50818]
Length = 278
Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/178 (70%), Positives = 149/178 (83%), Gaps = 1/178 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR+HNKPTFSQT+LL NLY NP N +DG + +T+EE
Sbjct: 16 VNCSFYYKIGACRHGDRCSRLHNKPTFSQTVLLQNLYQNPANMPALSDGRPGCA-MTEEE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE++DNFF D+F E E+KYG I +MNVCDNLGDHLVGNVYI F+ EEDAEKAV DLNNR
Sbjct: 75 LQENFDNFFADLFWELEEKYGPIVDMNVCDNLGDHLVGNVYIMFKNEEDAEKAVEDLNNR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
W+ G P+ AELSPVTDF+EACCRQYE+GECTR GFCNFMHLKP+S+ +R L+ R+R
Sbjct: 135 WYNGNPIVAELSPVTDFKEACCRQYELGECTRGGFCNFMHLKPLSKSMRDVLFGDRRR 192
>gi|395851239|ref|XP_003798173.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Otolemur garnettii]
Length = 223
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/173 (76%), Positives = 143/173 (82%), Gaps = 18/173 (10%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY NNR
Sbjct: 74 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVY----------------NNR 117
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 118 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 170
>gi|355727234|gb|AES09127.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mustela putorius
furo]
Length = 168
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/170 (75%), Positives = 149/170 (87%), Gaps = 4/170 (2%)
Query: 21 IHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKY 80
+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+DEE+QEHYDNFFE+VF E ++KY
Sbjct: 1 LHNKPTFSQTIVLLNLYQNPQNTAQTADGSH--CHVSDEEVQEHYDNFFEEVFTELQEKY 58
Query: 81 GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREA 140
GEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNRWF G+ V+AELSPVTDFRE+
Sbjct: 59 GEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRES 118
Query: 141 CCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKRSSRRSRSRSR 188
CCRQYEMGECTR GFCNFMHL+PISR L+R LY R R RS RS + R
Sbjct: 119 CCRQYEMGECTRGGFCNFMHLRPISRNLQRQLYGRGPRHRSPPRSHTGHR 168
>gi|380807533|gb|AFE75642.1| splicing factor U2AF 35 kDa subunit isoform b, partial [Macaca
mulatta]
Length = 192
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/152 (82%), Positives = 138/152 (90%), Gaps = 2/152 (1%)
Query: 22 HNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYG 81
HNKPTFSQTIL+ N+Y NPQNSA++ADGSH V+D EMQEHYD FFE+VF E E+KYG
Sbjct: 1 HNKPTFSQTILIQNIYRNPQNSAQTADGSHCA--VSDVEMQEHYDEFFEEVFTEMEEKYG 58
Query: 82 EIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREAC 141
E+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNRWF G+P++AELSPVTDFREAC
Sbjct: 59 EVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREAC 118
Query: 142 CRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
CRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 119 CRQYEMGECTRGGFCNFMHLKPISRELRRELY 150
>gi|148677752|gb|EDL09699.1| mCG12604 [Mus musculus]
Length = 212
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/155 (81%), Positives = 139/155 (89%), Gaps = 2/155 (1%)
Query: 20 RIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDK 79
R+HNKPTFSQTI LLN+Y NPQNS++SADG L V+D EMQEHYD FFE+VF E E+K
Sbjct: 6 RLHNKPTFSQTIALLNIYRNPQNSSQSADG--LRCAVSDVEMQEHYDEFFEEVFTEMEEK 63
Query: 80 YGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFRE 139
YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKA+ DLNNRWF G+P++AELSPVTDFRE
Sbjct: 64 YGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAMIDLNNRWFNGQPIHAELSPVTDFRE 123
Query: 140 ACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
ACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 124 ACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 158
>gi|149056307|gb|EDM07738.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_c
[Rattus norvegicus]
Length = 188
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/153 (80%), Positives = 140/153 (91%), Gaps = 2/153 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHC--HVSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYDNFFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 74 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRS 153
WF G+ V+AELSPVTDFRE+CCRQYEMG RS
Sbjct: 134 WFNGQAVHAELSPVTDFRESCCRQYEMGSPPRS 166
>gi|339238205|ref|XP_003380657.1| conserved hypothetical protein [Trichinella spiralis]
gi|316976430|gb|EFV59727.1| conserved hypothetical protein [Trichinella spiralis]
Length = 254
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/188 (65%), Positives = 143/188 (76%), Gaps = 23/188 (12%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGS---------- 50
VNCSFYFKIGACRHGD+CSRIHN+PTFSQTILL NLY NP+ A+ +
Sbjct: 16 VNCSFYFKIGACRHGDKCSRIHNRPTFSQTILLQNLYQNPKMDIHRAEAALFCCQFGRDV 75
Query: 51 -------------HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLV 97
++ VTD Q+H+D FFE++F E EDKYGEIEEMNVCDN+G+H++
Sbjct: 76 IGRPSTGALGELWWVMVGVTDSHEQQHFDEFFEEIFDEVEDKYGEIEEMNVCDNIGEHMI 135
Query: 98 GNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCN 157
GNVYIKF+REEDAE+AV DLN RWFGG P+YAELSPVTDFREACCRQYEMG+C + GFCN
Sbjct: 136 GNVYIKFKREEDAERAVKDLNTRWFGGMPIYAELSPVTDFREACCRQYEMGDCGKGGFCN 195
Query: 158 FMHLKPIS 165
FMHLKPIS
Sbjct: 196 FMHLKPIS 203
>gi|313227857|emb|CBY23006.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 144/178 (80%), Gaps = 6/178 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGAC +GDRCSR+HNKPTFSQT+LL NLY +P S +T+
Sbjct: 21 VNCSFYFKIGACHYGDRCSRLHNKPTFSQTMLLQNLYRSPILDDDSG------QQITETM 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+HYD F+E+VF E EDKYGEIEEMNVC+NLGDHLVGNVYIKF REED EKA +N+R
Sbjct: 75 LQQHYDEFYEEVFFEIEDKYGEIEEMNVCENLGDHLVGNVYIKFYREEDCEKAAEGVNDR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WFG +P+ ELSPVT+FREACCR YEMGECTR GFCNFMHLKPIS++LR+ LY+++ +
Sbjct: 135 WFGMQPIVGELSPVTNFREACCRDYEMGECTRGGFCNFMHLKPISKDLRKKLYAKKDK 192
>gi|33086652|gb|AAP92638.1| Cb2-806 [Rattus norvegicus]
Length = 254
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/180 (69%), Positives = 147/180 (81%), Gaps = 4/180 (2%)
Query: 8 KIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDN 67
++G H S + + F QTI+LLNLY NPQN+A++ADGSH +V+D E+QEHYDN
Sbjct: 57 RVGYTLHAVPLSELRSLLNFVQTIVLLNLYRNPQNTAQTADGSH--CHVSDVEVQEHYDN 114
Query: 68 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 127
FFE+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNRWF G+ V
Sbjct: 115 FFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAV 174
Query: 128 YAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKRSSRRSRS 185
+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY R R RS RS +
Sbjct: 175 HAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGRGPRHRSPPRSHT 234
>gi|390478906|ref|XP_003735604.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Callithrix jacchus]
Length = 283
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/169 (75%), Positives = 149/169 (88%), Gaps = 4/169 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+ SR+HNKPTF+QT++LLNLY NPQN+A+ ADGSH +V+D E
Sbjct: 76 VNCSFYFKIGACRHGDQYSRLHNKPTFTQTVVLLNLYRNPQNTAQIADGSHC--HVSDVE 133
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHYD+ FE+VF E ++KYGEIEEMNV DNLGDHLVGNVY+KFRREEDAE+AV +LNN
Sbjct: 134 VQEHYDS-FEEVFTELQEKYGEIEEMNVXDNLGDHLVGNVYVKFRREEDAERAVAELNN- 191
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 169
F G+ V+AELS VTDFRE+CC QYEMGECTR GFCNFMHL+PIS+ LR
Sbjct: 192 XFNGQAVHAELSHVTDFRESCCCQYEMGECTRGGFCNFMHLRPISQNLR 240
>gi|340371029|ref|XP_003384048.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Amphimedon
queenslandica]
Length = 188
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 142/177 (80%), Gaps = 9/177 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC+FY KIGACRHGD+CSR+HNKPTFSQT++L NLY NP I+ V+ EE
Sbjct: 16 VNCAFYHKIGACRHGDQCSRLHNKPTFSQTVMLQNLYQNPTRG---------ITTVSPEE 66
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q H++ FFEDVF+ECE+KYG IE+M+VCDNLGDHL+GNVYIKFR EEDAEKAV LNNR
Sbjct: 67 EQSHFEEFFEDVFIECEEKYGPIEKMHVCDNLGDHLIGNVYIKFRFEEDAEKAVQSLNNR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
WF +PV AELSPVT+F+EACC Q+++G+C R GFCNF H+KPI +LRR+LY +K
Sbjct: 127 WFNAQPVRAELSPVTNFKEACCHQFDVGQCGRGGFCNFWHIKPIPHKLRRFLYGGQK 183
>gi|444513449|gb|ELV10328.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 365
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 120/151 (79%), Positives = 133/151 (88%), Gaps = 2/151 (1%)
Query: 30 TILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVC 89
TI LLN+Y NPQNS++SADG L V+D EMQEHYD FFE+VF E E+KYGE+EEMNVC
Sbjct: 127 TIALLNIYRNPQNSSQSADG--LRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVC 184
Query: 90 DNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGE 149
DNLGDHLVGNVY+KFRREEDAEKAV DLNNRWF G+P++AELSPVTDFREACCRQYEMGE
Sbjct: 185 DNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGE 244
Query: 150 CTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
CTR GFCNFMHLKPISRELRR LY RR++
Sbjct: 245 CTRGGFCNFMHLKPISRELRRELYGRRRKKQ 275
>gi|441672642|ref|XP_004092375.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
Length = 213
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 130/144 (90%), Gaps = 2/144 (1%)
Query: 30 TILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVC 89
TIL+ N+Y NPQNSA++ADGSH V+D EMQEHYD FFE+VF E E+KYGE+EEMNVC
Sbjct: 18 TILIQNIYRNPQNSAQTADGSHCA--VSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVC 75
Query: 90 DNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGE 149
DNLGDHLVGNVY+KFRREEDAEKAV DLNNRWF G+P++AELSPVTDFREACCRQYEMGE
Sbjct: 76 DNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGE 135
Query: 150 CTRSGFCNFMHLKPISRELRRYLY 173
CTR GFCNFMHLKPISRELRR LY
Sbjct: 136 CTRGGFCNFMHLKPISRELRRELY 159
>gi|444509612|gb|ELV09368.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 252
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 122/168 (72%), Positives = 146/168 (86%), Gaps = 3/168 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HN+PTFSQTI+L ++Y NPQN A+SADG + +++ E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNRPTFSQTIVLRHMYRNPQNPAQSADG--VRGALSEAE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q+HY+ FF++VF E ++YGE+EEMNVCDNLGDHLVGNVY+KF REEDAEKA+ +N+R
Sbjct: 74 TQQHYEEFFQEVFTE-MEEYGEVEEMNVCDNLGDHLVGNVYVKFGREEDAEKALVAVNSR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
WF G+P++AELSPVTDFREACCRQYE G C R GFCNFMHLKPISREL
Sbjct: 133 WFHGQPIHAELSPVTDFREACCRQYETGACARGGFCNFMHLKPISREL 180
>gi|324504738|gb|ADY42042.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 255
Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR H++PTFS TILL N Y NP + AD + D E
Sbjct: 32 VNCSFYFKIGACRHGDKCSRTHHRPTFSPTILLQNFYHNPVVDVRQADAFDKVGK-KDPE 90
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q+++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NR
Sbjct: 91 EQKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFVREEDAEKAVKDLQNR 150
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P+YAELSPVTDFREA CRQ+E+ C++ GFCNFMHLK IS EL LY RR R
Sbjct: 151 WFNGQPIYAELSPVTDFREARCRQHEVTTCSKGGFCNFMHLKAISPELGDRLYGRRGR 208
>gi|312066026|ref|XP_003136074.1| hypothetical protein LOAG_00486 [Loa loa]
Length = 346
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/178 (64%), Positives = 138/178 (77%), Gaps = 1/178 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR H++PTFS T+LL N Y NP + AD + DEE
Sbjct: 132 VNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVDVRQADAFDKVGKKNDEE 191
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q ++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NR
Sbjct: 192 -QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKAVKDLENR 250
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P+YAELSPVTDFRE+ CRQ+E+ C + GFCNFMHLK IS EL L+ RR R
Sbjct: 251 WFNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAISPELGEKLFGRRGR 308
>gi|170595997|ref|XP_001902599.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158589634|gb|EDP28552.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 248
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/178 (64%), Positives = 138/178 (77%), Gaps = 1/178 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR H++PTFS T+LL N Y NP + AD + DEE
Sbjct: 34 VNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVDVRQADAFDKVGKKNDEE 93
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q ++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NR
Sbjct: 94 -QAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVYVKFLREEDAEKAVKDLENR 152
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P+YAELSPVTDFRE+ CRQ+E+ C + GFCNFMHLK IS EL L+ RR R
Sbjct: 153 WFNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAISPELGERLFGRRGR 210
>gi|402592968|gb|EJW86895.1| U2 snRNP splicing factor small subunit [Wuchereria bancrofti]
Length = 248
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/178 (64%), Positives = 138/178 (77%), Gaps = 1/178 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR H++PTFS T+LL N Y NP + AD + DEE
Sbjct: 34 VNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVDVRQADAFDKVGKKNDEE 93
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q ++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NR
Sbjct: 94 -QAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVYVKFLREEDAEKAVKDLENR 152
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P+YAELSPVTDFRE+ CRQ+E+ C + GFCNFMHLK IS EL L+ RR R
Sbjct: 153 WFNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAISPELGERLFGRRGR 210
>gi|324521720|gb|ADY47915.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 253
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 136/178 (76%), Gaps = 1/178 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR HN+PTFS TILL N Y NP + AD + +EE
Sbjct: 34 VNCSFYFKIGACRHGDKCSRTHNRPTFSPTILLQNFYHNPVVDLRQADAFDKVGKKNEEE 93
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q ++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NR
Sbjct: 94 -QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKAVKDLENR 152
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+P+Y ELSPVTDFRE+ CRQ+E+ C + GFCNFMHLK IS L L+ RR R
Sbjct: 153 WFNGQPIYVELSPVTDFRESRCRQHEITTCCKGGFCNFMHLKAISPALGEKLFGRRGR 210
>gi|268534530|ref|XP_002632396.1| C. briggsae CBR-UAF-2 protein [Caenorhabditis briggsae]
Length = 281
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 140/180 (77%), Gaps = 1/180 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSF+FK GACRHGD+CSR H+ PTFS T++L N Y NP + AD + DEE
Sbjct: 24 VNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVDVRQADAFDKVGKRNDEE 83
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q ++D+F+E+VFVE E KYGE+EE+NVC+N+G+H+VGNVY+KF +EEDAEKA NDLNNR
Sbjct: 84 -QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNR 142
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P+YAEL PVTDFRE+ CRQ+E+ C++ GFCNFMHLK IS EL LY RR R +
Sbjct: 143 WFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYGRRGRRA 202
>gi|308482690|ref|XP_003103548.1| CRE-UAF-2 protein [Caenorhabditis remanei]
gi|308259969|gb|EFP03922.1| CRE-UAF-2 protein [Caenorhabditis remanei]
Length = 287
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 140/180 (77%), Gaps = 1/180 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSF+FK GACRHGD+CSR H+ PTFS T++L N Y NP + AD + DEE
Sbjct: 24 VNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVDVRQADAFDKVGKRNDEE 83
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q ++D+F+E+VFVE E KYGE+EE+NVC+N+G+H+VGNVY+KF +EEDAEKA NDLNNR
Sbjct: 84 -QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNR 142
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P+YAEL PVTDFRE+ CRQ+E+ C++ GFCNFMHLK IS EL LY RR R +
Sbjct: 143 WFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYGRRGRRA 202
>gi|341886073|gb|EGT42008.1| CBN-UAF-2 protein [Caenorhabditis brenneri]
Length = 278
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 140/180 (77%), Gaps = 1/180 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSF+FK GACRHGD+CSR H+ PTFS T++L N Y NP + AD + DEE
Sbjct: 24 VNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVDVRQADAFDKVGKRNDEE 83
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q ++D+F+E+VFVE E KYGE+EE+NVC+N+G+H+VGNVY+KF +EEDAEKA NDLNNR
Sbjct: 84 -QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNR 142
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P+YAEL PVTDFRE+ CRQ+E+ C++ GFCNFMHLK IS EL LY RR R +
Sbjct: 143 WFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISSELGDRLYGRRGRRA 202
>gi|395751008|ref|XP_003780722.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Pongo abelii]
Length = 179
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 113/147 (76%), Positives = 131/147 (89%), Gaps = 2/147 (1%)
Query: 27 FSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEM 86
QTI+LLNLY NPQN+A++ADGSH +V+D E+QEHYDNFFE+VF E ++KYGE EEM
Sbjct: 1 MPQTIVLLNLYRNPQNTAQTADGSH--CHVSDVEVQEHYDNFFEEVFTELQEKYGEXEEM 58
Query: 87 NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYE 146
NVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNRWF G+ V+AELSPVTDFRE+CCRQYE
Sbjct: 59 NVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYE 118
Query: 147 MGECTRSGFCNFMHLKPISRELRRYLY 173
MGECTR GFCNFMHL+PIS+ LRR LY
Sbjct: 119 MGECTRGGFCNFMHLRPISQNLRRQLY 145
>gi|324522962|gb|ADY48164.1| Splicing factor U2AF 26 kDa subunit, partial [Ascaris suum]
Length = 303
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 140/188 (74%), Gaps = 9/188 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR+H +PT+SQTILL N Y G H S+ + EE
Sbjct: 20 VNCSFYFKIGACRHGDKCSRLHIRPTYSQTILLKNFY--------RGAGIH-SSDTSKEE 70
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q +D F+ +VFVE +D+YG IEEMNVCDN+G+H++GNVY+KFR E AE+AVN LN R
Sbjct: 71 AQREFDEFYREVFVEIDDEYGRIEEMNVCDNVGEHMLGNVYVKFRHESSAERAVNSLNER 130
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF GRP++ ELSPV DFR+ACCRQYE+GEC R GFCNFMHLK +S L+R L R +R
Sbjct: 131 WFDGRPIHCELSPVVDFRDACCRQYEIGECNRGGFCNFMHLKKVSSGLKRKLLRRSERQK 190
Query: 181 RRSRSRSR 188
RR ++ R
Sbjct: 191 RRKCTKWR 198
>gi|17544466|ref|NP_503036.1| Protein UAF-2 [Caenorhabditis elegans]
gi|5832799|emb|CAB55137.1| Protein UAF-2 [Caenorhabditis elegans]
Length = 285
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 140/180 (77%), Gaps = 1/180 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSF+FK GACRHGD+CSR H+ PTFS T++L N Y NP + AD + D+E
Sbjct: 24 VNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVDVRQADAFDKVGKRNDQE 83
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q ++D+F+E+VFVE E KYGE+EE+NVC+N+G+H+VGNVY+KF +EEDAEKA NDLNNR
Sbjct: 84 -QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNR 142
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P+YAEL PVTDFRE+ CRQ+E+ C++ GFCNFMHLK IS EL LY RR R +
Sbjct: 143 WFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYGRRGRRA 202
>gi|320163034|gb|EFW39933.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Capsaspora
owczarzaki ATCC 30864]
Length = 211
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 116/174 (66%), Positives = 133/174 (76%), Gaps = 3/174 (1%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP-QNSAKSADGSHLISNVTDEE 60
NCSFYFK+GACRHG RCSR+H KPTFS TILL N Y +P N A G I T
Sbjct: 17 NCSFYFKMGACRHGARCSRLHIKPTFSPTILLPNFYKSPYPNPANPESGP--IDPETMLA 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q+H+D F+EDVF E E+KYG +EEMNVCDNL +HLVGN Y+KFRREEDAE+A DLNNR
Sbjct: 75 SQDHFDEFYEDVFTEMEEKYGAVEEMNVCDNLSEHLVGNTYVKFRREEDAERAAEDLNNR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
WF GR V AELS VTDF EACCRQY++G+C GFCNFMH+KPIS+ELRR +Y
Sbjct: 135 WFDGRVVSAELSTVTDFNEACCRQYDIGQCKFGGFCNFMHIKPISKELRREIYG 188
>gi|198430519|ref|XP_002128159.1| PREDICTED: zinc finger (C-x8-C-x5-C-x3-H)-16 [Ciona intestinalis]
Length = 187
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/185 (70%), Positives = 142/185 (76%), Gaps = 33/185 (17%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHG+RCSR+HNKPTFSQTI
Sbjct: 16 VNCSFYFKIGACRHGERCSRLHNKPTFSQTI----------------------------- 46
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
HYDNFFE+VFVE E+KYG IEEMNVCDNLGDHLVGNVYIKF +EEDAEKAVNDLNNR
Sbjct: 47 ---HYDNFFEEVFVELEEKYGSIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKAVNDLNNR 103
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P+ +ELS VTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY R+++
Sbjct: 104 WFNGQPIMSELSTVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRRLYGRKEK-K 162
Query: 181 RRSRS 185
+RSRS
Sbjct: 163 KRSRS 167
>gi|167526258|ref|XP_001747463.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774298|gb|EDQ87930.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 134/180 (74%), Gaps = 11/180 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR+HNKPTFSQTIL+ NLY NP N+ DG S ++ E
Sbjct: 203 VNCSFYYKIGACRHGDRCSRLHNKPTFSQTILMQNLYQNPINTPVMPDGRPGHS-LSKGE 261
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+D F+ D+F E E+KYG +E+MNVCDNLGDHLVGNVY+ F +ED EKAV DLNNR
Sbjct: 262 LQEHFDRFYADIFWELEEKYGAVEDMNVCDNLGDHLVGNVYVMFENDEDGEKAVLDLNNR 321
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
W+G VTDFREACCRQYE ECTR GFCNFMHL+ + +++ LY R R S
Sbjct: 322 WYG----------VTDFREACCRQYEKSECTRGGFCNFMHLRKLGDNMQKTLYGNRVRPS 371
>gi|328770702|gb|EGF80743.1| hypothetical protein BATDEDRAFT_11284 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 147/200 (73%), Gaps = 20/200 (10%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP FSQT+L+ NLY+NP ++ +T +E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPNFSQTLLIPNLYLNPAHNPGCT--------MTPDE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE++D FED+F+E KYGE+E+MN+CDN+GDHL+GNVY +F+ EEDA AV LNNR
Sbjct: 68 IQENFDLLFEDLFMELA-KYGELEDMNICDNVGDHLIGNVYARFKYEEDAGNAVESLNNR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+YAELSPVTDF EACCRQYE+GECTR GFCNFMH+K S+ + + +Y ++ S
Sbjct: 127 FYAGRPLYAELSPVTDFGEACCRQYELGECTRGGFCNFMHIKKPSKAMIKDMYKAQRLSI 186
Query: 181 R-----------RSRSRSRD 189
+ RSRS SR+
Sbjct: 187 KILKPRGDEDDGRSRSHSRE 206
>gi|384494564|gb|EIE85055.1| hypothetical protein RO3G_09765 [Rhizopus delemar RA 99-880]
Length = 243
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/184 (60%), Positives = 140/184 (76%), Gaps = 9/184 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KPTFSQT+L+ N+Y NP + A ++T+ +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPTFSQTLLIANMYKNPVHDA--------AFHLTESQ 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE++D F+EDVF+E K+GE+E+M VCDN+GDHLVGNVY ++R EE A AV LNNR
Sbjct: 68 LQENFDLFYEDVFMELA-KFGEVEDMVVCDNVGDHLVGNVYCQYRLEESAGNAVESLNNR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+YAELSPVTDFREACCRQ+E+ EC R GFCNFMHLK +R +RR LY ++
Sbjct: 127 FYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFCNFMHLKHPTRTMRRELYEGQRMDI 186
Query: 181 RRSR 184
R R
Sbjct: 187 REKR 190
>gi|384486958|gb|EIE79138.1| hypothetical protein RO3G_03843 [Rhizopus delemar RA 99-880]
Length = 230
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 138/185 (74%), Gaps = 9/185 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KPTFSQT+L+ N+Y NP + ++T+ +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPTFSQTLLIANMYKNPAHDPNF--------HLTENQ 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D F+EDVF+E K+GE+EEM VCDN+GDHLVGNVY +FR EE A AV LNNR
Sbjct: 68 LQEDFDLFYEDVFMELA-KFGEVEEMVVCDNVGDHLVGNVYCQFRLEESAGNAVESLNNR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+YAELSPVTDFREACCRQ+E+ EC R GFCNFMHLK +R LR+ LY ++
Sbjct: 127 FYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFCNFMHLKHPTRALRQELYEGQRMDI 186
Query: 181 RRSRS 185
R R
Sbjct: 187 REKRK 191
>gi|344298239|ref|XP_003420801.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Loxodonta
africana]
Length = 181
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 124/173 (71%), Gaps = 41/173 (23%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVTELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY
Sbjct: 95 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 147
>gi|194215326|ref|XP_001492664.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Equus caballus]
gi|345785118|ref|XP_853689.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|410983235|ref|XP_003997947.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Felis catus]
Length = 181
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 124/173 (71%), Gaps = 41/173 (23%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY
Sbjct: 95 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 147
>gi|335289512|ref|XP_003355908.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2 [Sus
scrofa]
Length = 181
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 124/173 (71%), Gaps = 41/173 (23%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR LRR LY
Sbjct: 95 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 147
>gi|426242749|ref|XP_004015233.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Ovis
aries]
Length = 181
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 125/173 (72%), Gaps = 41/173 (23%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVVELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PISR+LRR LY
Sbjct: 95 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLY 147
>gi|307107585|gb|EFN55827.1| hypothetical protein CHLNCDRAFT_57737 [Chlorella variabilis]
Length = 395
Score = 228 bits (582), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 138/184 (75%), Gaps = 4/184 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP-QNSAKSADGSHLISNVTDE 59
VNC FYFKIGACRHGDRCSR+HN+PT S TILL N+Y NP N+ DG L V +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTILLQNMYQNPILNAPLGPDG--LPMPVDPK 73
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
++QE +++F+ED+F+E K+GE+E +NVCDNL DH+VGNVY+KFR EE+A +A+ +
Sbjct: 74 KVQEFFEDFYEDIFLELA-KFGEVEYLNVCDNLADHMVGNVYVKFRDEEEAARALQGMQG 132
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
R++ G+P+ E SPVTDFREA CRQYE C+R G+CNFMH++P+SRELR+ L+ R K
Sbjct: 133 RYYAGKPIVVEFSPVTDFREATCRQYEENNCSRGGYCNFMHVRPVSRELRKQLFGRYKGG 192
Query: 180 SRRS 183
+ S
Sbjct: 193 TGGS 196
>gi|384254294|gb|EIE27768.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 248
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ-NSAKSADGSHLISNVTDE 59
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL NLY NP N+ DG L V
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLPNLYQNPALNAPPGPDG--LPMPVDAR 73
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+ QEH+++F+ED+F E DKYG+IE +NVCDNL DH+VGNVYIKF E+ A +A+ L
Sbjct: 74 KSQEHFEDFYEDIFEEM-DKYGQIEHLNVCDNLADHMVGNVYIKFVDEDAAARALQGLTG 132
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
R++ GRP+ E SPVTDFREA CRQYE CTR G+CNFMHL+PIS+ LR+ L+ R K+
Sbjct: 133 RFYAGRPIMIEFSPVTDFREATCRQYEENTCTRGGYCNFMHLRPISKGLRKDLFGRYKK 191
>gi|303287873|ref|XP_003063225.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455057|gb|EEH52361.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 324
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 134/179 (74%), Gaps = 3/179 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD-GSHLISNVTDE 59
VNC FYFKIGACRHGDRCSR+HNKPT SQTIL+ N+Y +P+ + + S + D
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPTLSQTILMSNMYQSPEAAMAAQAATSGAVPEAPDA 75
Query: 60 -EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
+MQEH+++F+ED+F E YGEIE +N+CDNL DHLVGNVY+K+R EE A A+N L+
Sbjct: 76 RKMQEHFEDFYEDIFEELA-TYGEIEGLNICDNLADHLVGNVYVKYREEESALAALNALS 134
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
R++ GRP+ E SPVTDFRE+ CRQYE CTR G+CNFMHLKPISR LR+ L+ R K
Sbjct: 135 GRFYAGRPILCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHLKPISRNLRKILFGRYK 193
>gi|332263383|ref|XP_003280726.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Nomascus
leucogenys]
gi|332872231|ref|XP_003319153.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Pan
troglodytes]
gi|397506809|ref|XP_003823909.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
paniscus]
Length = 202
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/143 (74%), Positives = 119/143 (83%), Gaps = 3/143 (2%)
Query: 34 LNLYINPQNSAKSADGSHL---ISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCD 90
L IN + ++ + HL V+D EMQEHYD FFE+VF E E+KYGE+EEMNVCD
Sbjct: 6 LGCTINRRLASTESQLKHLPEAAGAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCD 65
Query: 91 NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGEC 150
NLGDHLVGNVY+KFRREEDAEKAV DLNNRWF G+P++AELSPVTDFREACCRQYEMGEC
Sbjct: 66 NLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGEC 125
Query: 151 TRSGFCNFMHLKPISRELRRYLY 173
TR GFCNFMHLKPISRELRR LY
Sbjct: 126 TRGGFCNFMHLKPISRELRRELY 148
>gi|114676803|ref|XP_001160959.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 3 [Pan
troglodytes]
Length = 181
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 123/178 (69%), Gaps = 41/178 (23%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIG CRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGVCRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+ V+ ELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L+R LY R R
Sbjct: 95 WFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLYGRGPR 152
>gi|397490405|ref|XP_003816195.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Pan
paniscus]
Length = 181
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 123/178 (69%), Gaps = 41/178 (23%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIG CRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGVCRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF G+ V+ ELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L+R LY R R
Sbjct: 95 WFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLYGRGPR 152
>gi|195625888|gb|ACG34774.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 133/189 (70%), Gaps = 5/189 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 178
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R +R
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSASRR 192
Query: 179 SSRRSRSRS 187
RSRSRS
Sbjct: 193 YHGRSRSRS 201
>gi|195615822|gb|ACG29741.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 130/188 (69%), Gaps = 3/188 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSASRR 192
Query: 181 RRSRSRSR 188
RSRSR
Sbjct: 193 YHGRSRSR 200
>gi|212275838|ref|NP_001130754.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|194690026|gb|ACF79097.1| unknown [Zea mays]
gi|194703336|gb|ACF85752.1| unknown [Zea mays]
gi|407232734|gb|AFT82709.1| C3H53 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413946518|gb|AFW79167.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413946519|gb|AFW79168.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413946520|gb|AFW79169.1| splicing factor U2af subunit isoform 3 [Zea mays]
Length = 307
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 130/188 (69%), Gaps = 3/188 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSASRR 192
Query: 181 RRSRSRSR 188
RSRSR
Sbjct: 193 YHGRSRSR 200
>gi|168049329|ref|XP_001777116.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671559|gb|EDQ58109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 127/175 (72%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHL-ISNVTDE 59
VNC FYFKIG CRHGDRCSR+HN+PT SQT+LL N+Y +P H I
Sbjct: 16 VNCPFYFKIGVCRHGDRCSRLHNRPTASQTLLLANMYQSPDAGFHGGVDQHGNIQQSDPR 75
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
++QEH+++F+ED+F E KYGEIE +NVCDNL DH++GNVY+KFR EE A A+N L+
Sbjct: 76 KLQEHFEDFYEDIFEEL-SKYGEIENLNVCDNLADHMIGNVYVKFREEEHAAAALNALSG 134
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+
Sbjct: 135 RFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRKLFG 189
>gi|242088837|ref|XP_002440251.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
gi|241945536|gb|EES18681.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
Length = 307
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 133/189 (70%), Gaps = 5/189 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 178
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R +R
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSASRR 192
Query: 179 SSRRSRSRS 187
RSRSRS
Sbjct: 193 YHGRSRSRS 201
>gi|226506342|ref|NP_001150605.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195640524|gb|ACG39730.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|223947729|gb|ACN27948.1| unknown [Zea mays]
gi|407232662|gb|AFT82673.1| C3H4 C3H transcription factor, partial [Zea mays subsp. mays]
gi|414591925|tpg|DAA42496.1| TPA: Splicing factor U2af subunit isoform 1 [Zea mays]
gi|414591926|tpg|DAA42497.1| TPA: Splicing factor U2af subunit isoform 2 [Zea mays]
gi|414591927|tpg|DAA42498.1| TPA: Splicing factor U2af subunit isoform 3 [Zea mays]
gi|414591928|tpg|DAA42499.1| TPA: Splicing factor U2af subunit isoform 4 [Zea mays]
Length = 299
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 133/189 (70%), Gaps = 5/189 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 178
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R +R
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSASRR 192
Query: 179 SSRRSRSRS 187
RSRSRS
Sbjct: 193 YHGRSRSRS 201
>gi|351629504|gb|AEQ54731.1| SiU2af35 [Setaria italica]
Length = 294
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 130/188 (69%), Gaps = 3/188 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I ++LRR LY R
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKDLRRKLYGRSASRK 192
Query: 181 RRSRSRSR 188
RSRSR
Sbjct: 193 YHGRSRSR 200
>gi|297276805|ref|XP_001112161.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Macaca
mulatta]
Length = 181
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/173 (63%), Positives = 124/173 (71%), Gaps = 41/173 (23%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMN+CD+LGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ LRR +Y
Sbjct: 95 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVY 147
>gi|332262088|ref|XP_003280097.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Nomascus
leucogenys]
Length = 181
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 128/184 (69%), Gaps = 43/184 (23%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VN SFYFKIGACRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNRSFYFKIGACRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +L+NR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELSNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY--SRRKR 178
WF G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ LRR LY R+R
Sbjct: 95 WFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQLYGWGPRRR 154
Query: 179 SSRR 182
S R
Sbjct: 155 SPPR 158
>gi|343424964|emb|CBQ68501.1| related to splicing factor U2AF 35 kd subunit [Sporisorium
reilianum SRZ2]
Length = 282
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 138/189 (73%), Gaps = 8/189 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H +P +S T+LL N+Y NP++ + +TD E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRHHEQDC-------TITDTE 68
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q +D F+ED+FVE +YG++ EM+VCDN+GDHL+GNVY ++R E DA++AV+ LN+R
Sbjct: 69 LQAQFDTFYEDMFVELA-QYGQLVEMHVCDNVGDHLIGNVYARYRYEADAQRAVDALNDR 127
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
W+ G+P++AELSPVTDF+EACCRQ E EC R GFCNFMHL+ SR +R+ L +
Sbjct: 128 WYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASRPIRKQLNHQLAVEL 187
Query: 181 RRSRSRSRD 189
R+ R RD
Sbjct: 188 RKRRDEGRD 196
>gi|413948479|gb|AFW81128.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413948480|gb|AFW81129.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413948481|gb|AFW81130.1| splicing factor U2af subunit isoform 3 [Zea mays]
gi|413948482|gb|AFW81131.1| splicing factor U2af subunit isoform 4 [Zea mays]
gi|413948483|gb|AFW81132.1| splicing factor U2af subunit isoform 5 [Zea mays]
Length = 304
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 133/188 (70%), Gaps = 5/188 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R +S
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGR--SAS 190
Query: 181 RRSRSRSR 188
RR +RSR
Sbjct: 191 RRYHARSR 198
>gi|226492577|ref|NP_001148499.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195619816|gb|ACG31738.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 305
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 133/188 (70%), Gaps = 5/188 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAYNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR LY R +S
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGR--SAS 190
Query: 181 RRSRSRSR 188
RR +RSR
Sbjct: 191 RRYHARSR 198
>gi|168004337|ref|XP_001754868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693972|gb|EDQ80322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 283
Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 127/175 (72%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHL-ISNVTDE 59
VNC FYFKIG CRHGDRCSR+HN+PT SQT+LL N+Y +P H I
Sbjct: 16 VNCPFYFKIGVCRHGDRCSRLHNRPTASQTLLLANMYQSPDAGFHGGVDQHGNIQQSDPR 75
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
++QEH+++F+ED+F E KYGEIE +NVCDNL DH++GNVY+KFR EE A A+N L+
Sbjct: 76 KLQEHFEDFYEDIFEEL-SKYGEIENLNVCDNLADHMIGNVYVKFREEEHAAAALNALSG 134
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+
Sbjct: 135 RFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRKLFG 189
>gi|402586021|gb|EJW79960.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Wuchereria
bancrofti]
Length = 215
Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 130/176 (73%), Gaps = 1/176 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR H P+FSQT+LL NLY NP + AD + + ++E
Sbjct: 23 VNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMIDTRQADAFAKVGQMNEQE 82
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q + F E EDK+G I+EMNVCDN+G+H++GNVY+KF EEDA+K V L NR
Sbjct: 83 QQYFEEFFEEIFVEL-EDKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENR 141
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 176
WF G PVYAELSPVTDFREACCRQYE+G C + FCNFMHLK ISR+LRR LY R
Sbjct: 142 WFNGSPVYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYGSR 197
>gi|312088442|ref|XP_003145864.1| hypothetical protein LOAG_10291 [Loa loa]
gi|307758974|gb|EFO18208.1| hypothetical protein LOAG_10291 [Loa loa]
Length = 252
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 130/176 (73%), Gaps = 1/176 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR H P+FSQT+LL NLY NP + AD + + ++E
Sbjct: 23 VNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMIDTRQADAFAKVGQMNEQE 82
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q + F E EDK+G I+EMNVCDN+G+H++GNVY+KF EEDA+K V L NR
Sbjct: 83 QQYFEEFFEEIFVEL-EDKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENR 141
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 176
WF G PVYAELSPVTDFREACCRQYE+G C + FCNFMHLK ISR+LRR LY R
Sbjct: 142 WFNGSPVYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYGSR 197
>gi|170596198|ref|XP_001902678.1| splicing factor U2AF35 [Brugia malayi]
gi|158589514|gb|EDP28475.1| splicing factor U2AF35, putative [Brugia malayi]
Length = 247
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 130/176 (73%), Gaps = 1/176 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR H P+FSQT+LL NLY NP + AD + + ++E
Sbjct: 23 VNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMIDTRQADAFAKVGQMNEQE 82
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q + F E EDK+G I+EMNVCDN+G+H++GNVY+KF EEDA+K V L NR
Sbjct: 83 QQYFEEFFEEIFVEL-EDKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENR 141
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 176
WF G PVYAELSPVTDFREACCRQYE+G C + FCNFMHLK ISR+LRR LY R
Sbjct: 142 WFNGSPVYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYGSR 197
>gi|159476640|ref|XP_001696419.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
gi|158282644|gb|EDP08396.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
Length = 273
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 128/178 (71%), Gaps = 4/178 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ-NSAKSADGSHLISNVTDE 59
VNC FYFKIGACRHGDRCSR+HN+PT S TIL+ N+Y NP N+ DG L V
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTILMANMYQNPLLNAPLGPDG--LPIRVDPR 73
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
QEH+++F+EDVF E +GE+E +NVCDN DH+VGNVY KFR E+ A +A+ L
Sbjct: 74 AAQEHFEDFYEDVFEELA-AHGELENLNVCDNFADHMVGNVYAKFRDEDAAARALTALQG 132
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
R++ GRP+ E SPVTDFREA CRQYE C R G+CNFMHLKPISRELR+ L+ R K
Sbjct: 133 RYYDGRPIIVEFSPVTDFREATCRQYEENTCNRGGYCNFMHLKPISRELRKKLFGRYK 190
>gi|355727231|gb|AES09126.1| U2 small nuclear RNA auxiliary factor 1 [Mustela putorius furo]
Length = 133
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/119 (85%), Positives = 110/119 (92%)
Query: 56 VTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVN 115
V+D EMQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV
Sbjct: 2 VSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVI 61
Query: 116 DLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
DLNNRWF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 62 DLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 120
>gi|390601914|gb|EIN11307.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 238
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 132/172 (76%), Gaps = 9/172 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP+FSQTILL N+Y NP + + +T+++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIKPSFSQTILLPNVYHNPAHDP--------VCQLTEQQ 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LNNR
Sbjct: 68 LQEGFDAVYEDLYCEL-SKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNNR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL + L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKELVKSL 178
>gi|255089300|ref|XP_002506572.1| predicted protein [Micromonas sp. RCC299]
gi|226521844|gb|ACO67830.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 133/177 (75%), Gaps = 3/177 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHG+RCSR+HNKPT SQTIL+ N+Y +P +A + + + N
Sbjct: 16 VNCPFYFKIGACRHGERCSRLHNKPTLSQTILMSNMYQSPAAAAIANPSAQI--NTDPRA 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++F+ED+F E KYGEIE +NVCDN DHL+GNVY+KFR EE A A+N L+ R
Sbjct: 74 IQEHFEDFYEDIFEELA-KYGEIEGLNVCDNTSDHLIGNVYVKFREEESALAALNALSGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
++ GRP+ E SPVTDFRE+ CRQYE C R G+CNFMHLKPISR+LR+ L+ R K
Sbjct: 133 FYSGRPILCEFSPVTDFRESTCRQYEENTCNRGGYCNFMHLKPISRQLRKILFGRYK 189
>gi|94536809|ref|NP_001035515.1| splicing factor U2AF 26 kDa subunit isoform 1 [Homo sapiens]
gi|92090952|gb|AAT72770.3| U2 small nuclear RNA auxiliary factor 1-like 3 splicing variant 1
[Homo sapiens]
Length = 181
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 121/173 (69%), Gaps = 41/173 (23%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIG CRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGVCRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +L+NR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+ ELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L+R LY
Sbjct: 95 WFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLY 147
>gi|380802765|gb|AFE73258.1| splicing factor U2AF 26 kDa subunit isoform 1, partial [Macaca
mulatta]
Length = 131
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 122/172 (70%), Gaps = 41/172 (23%)
Query: 4 SFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQE 63
SFYFKIGACRHGDRCSR+HNKPTFSQ
Sbjct: 1 SFYFKIGACRHGDRCSRLHNKPTFSQ---------------------------------- 26
Query: 64 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 123
+VF E ++KYGEIEEMN+CD+LGDHLVGNVY+KFRREEDAE+AV +LNNRWF
Sbjct: 27 -------EVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNRWFN 79
Query: 124 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
G+ V+AELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ LRR +Y R
Sbjct: 80 GQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVYGR 131
>gi|255573032|ref|XP_002527446.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223533181|gb|EEF34938.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 322
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 128/175 (73%), Gaps = 3/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P D + + + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDIITPGVDANG--NPIDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H++ F+ED+F E KYGEI+ +NVCDNL DH+VGNVY++FR EEDAE A+ +L+ R
Sbjct: 74 IQQHFEEFYEDLFQEL-SKYGEIDSLNVCDNLADHMVGNVYVQFREEEDAENALRNLSGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMHLK I RELR L+ R
Sbjct: 133 FYAGRPIIADFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGRELRHQLFGR 187
>gi|356505320|ref|XP_003521439.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 136/190 (71%), Gaps = 3/190 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP--QNSAKSADGSHLISNVTD 58
VNC FYFKIGACRHGDRCSR+H KPT S T++L N+Y P S + ++
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMSIITNPDQPQPQSLDP 75
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
+++Q+H+D+F+ED+F E KYG I+ +N+CDNL DH+VGNVY++FR E+ A A+ +L
Sbjct: 76 DKVQDHFDDFYEDLFEELS-KYGPIQSLNICDNLADHMVGNVYVQFREEDHAANALMNLT 134
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+ R +R
Sbjct: 135 GRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRR 194
Query: 179 SSRRSRSRSR 188
+ RS SRSR
Sbjct: 195 WNGRSGSRSR 204
>gi|218197274|gb|EEC79701.1| hypothetical protein OsI_20991 [Oryza sativa Indica Group]
Length = 308
Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S TI+L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GE+E +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I RELRR LY
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
>gi|356572520|ref|XP_003554416.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 137/191 (71%), Gaps = 5/191 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ---NSAKSADGSHLISNVT 57
VNC FYFKIGACRHGDRCSR+H KPT S T++L N+Y P N + D S +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMNIITNPDQPQPQS-LD 74
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
+++Q+H+D+F+ED+F E KYG I+ +N+CDNL DH+VGNVY++FR E+ A A+ +L
Sbjct: 75 PDKVQDHFDDFYEDLFEELS-KYGPIQSLNICDNLADHMVGNVYVQFREEDHAANALMNL 133
Query: 118 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+ R +
Sbjct: 134 TGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNR 193
Query: 178 RSSRRSRSRSR 188
R + RS SRS+
Sbjct: 194 RWNGRSGSRSK 204
>gi|19115857|ref|NP_594945.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe 972h-]
gi|6136086|sp|Q09176.2|U2AF1_SCHPO RecName: Full=Splicing factor U2AF 23 kDa subunit; AltName: Full=U2
auxiliary factor 23 kDa subunit; Short=U2AF23; AltName:
Full=U2 snRNP auxiliary factor small subunit
gi|2347143|gb|AAC49805.1| spU2AF23 [Schizosaccharomyces pombe]
gi|5834791|emb|CAB55173.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe]
Length = 216
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 129/178 (72%), Gaps = 9/178 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHG+RCSR H KP FSQTIL N+Y NP + T E
Sbjct: 16 VNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIHEPNG-------KKFTQRE 68
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ E +D F+ED+F E KYGE+E++ VCDN+GDHLVGNVY++F+ EE A+ A++DLN+R
Sbjct: 69 LAEQFDAFYEDMFCEF-SKYGEVEQLVVCDNVGDHLVGNVYVRFKYEESAQNAIDDLNSR 127
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL-KPISRELRRYLYSRRK 177
W+ RPVYAELSPVTDFREACCRQ+E EC R G CNFMH KP + LR + ++RK
Sbjct: 128 WYSQRPVYAELSPVTDFREACCRQHETSECQRGGLCNFMHAKKPSPQLLRDLVLAQRK 185
>gi|326522777|dbj|BAJ88434.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 125/173 (72%), Gaps = 3/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S TI+L N+Y P D + + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTTSPTIVLANMYQRPDMITPGVDAQGVA--IAPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GE+E +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I RELRR LY
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
>gi|405122366|gb|AFR97133.1| splicing factor [Cryptococcus neoformans var. grubii H99]
Length = 223
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 133/183 (72%), Gaps = 8/183 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHGDRCSR H KP FSQTILL N+Y NP ++ + N++ EE
Sbjct: 16 VNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYNNPGHTPEG-------QNMSAEE 68
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q +D F+ED F+E KYG ++EM VCDN+GDHL+GNVY +F E +A +AV LN+R
Sbjct: 69 LQADFDRFYEDFFIELA-KYGNLQEMIVCDNVGDHLLGNVYARFEYEAEAARAVQALNDR 127
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
W+ RP++AELSPVTDFRE+CCRQ E+GEC R GFCNFMHL +R L L + ++ S
Sbjct: 128 WYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSLVSALQASQRVSR 187
Query: 181 RRS 183
RR+
Sbjct: 188 RRA 190
>gi|321262008|ref|XP_003195723.1| U2 snRNP auxiliary factor small subunit [Cryptococcus gattii WM276]
gi|317462197|gb|ADV23936.1| U2 snRNP auxiliary factor small subunit, putative [Cryptococcus
gattii WM276]
Length = 223
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 133/183 (72%), Gaps = 8/183 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHGDRCSR H KP FSQTILL N+Y NP ++ + N++ EE
Sbjct: 16 VNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYNNPGHTPEG-------QNMSAEE 68
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q +D F+ED F+E KYG ++EM VCDN+GDHL+GNVY +F E +A +AV LN+R
Sbjct: 69 LQADFDRFYEDFFIELA-KYGNLQEMIVCDNVGDHLLGNVYARFEYEAEAARAVQALNDR 127
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
W+ RP++AELSPVTDFRE+CCRQ E+GEC R GFCNFMHL +R L L + ++ S
Sbjct: 128 WYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSLVSALQASQRVSR 187
Query: 181 RRS 183
RR+
Sbjct: 188 RRA 190
>gi|58271046|ref|XP_572679.1| splicing factor [Cryptococcus neoformans var. neoformans JEC21]
gi|134114768|ref|XP_773682.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256310|gb|EAL19035.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228938|gb|AAW45372.1| splicing factor, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 223
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 133/183 (72%), Gaps = 8/183 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHGDRCSR H KP FSQTILL N+Y NP ++ + N++ EE
Sbjct: 16 VNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYNNPGHTPEG-------QNMSAEE 68
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q +D F+ED F+E KYG ++EM VCDN+GDHL+GNVY +F E +A +AV LN+R
Sbjct: 69 LQADFDRFYEDFFIELA-KYGNLQEMIVCDNVGDHLLGNVYARFEYEAEAARAVQALNDR 127
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
W+ RP++AELSPVTDFRE+CCRQ E+GEC R GFCNFMHL +R L L + ++ S
Sbjct: 128 WYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSLVSALQASQRVSR 187
Query: 181 RRS 183
RR+
Sbjct: 188 RRA 190
>gi|312071157|ref|XP_003138478.1| hypothetical protein LOAG_02893 [Loa loa]
gi|307766351|gb|EFO25585.1| hypothetical protein LOAG_02893 [Loa loa]
Length = 307
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 134/188 (71%), Gaps = 9/188 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHGD+CSR+H +P S+TILL N Y DG + ++ E
Sbjct: 23 VNCSFYLKIGACRHGDKCSRLHIRPNSSKTILLKNFY--------HFDGI-IRQELSKER 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q +D FF +V++E ++KYGEI+EMNVCDN G+H++GNVYIKF E +A A+ LNNR
Sbjct: 74 EQREFDEFFREVYLEIDEKYGEIDEMNVCDNTGEHMLGNVYIKFLHESNASNAMKALNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P++ ELSPV+DFR+ACCRQYE GEC+R GFCNFMHLK +S L+R L ++
Sbjct: 134 WFDGKPIHCELSPVSDFRDACCRQYENGECSRGGFCNFMHLKKVSSSLKRKLEKESGKAR 193
Query: 181 RRSRSRSR 188
R+ ++ R
Sbjct: 194 RKKSAKMR 201
>gi|297818960|ref|XP_002877363.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
gi|297323201|gb|EFH53622.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
Length = 277
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 131/187 (70%), Gaps = 3/187 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
NC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P D + + + +
Sbjct: 16 ANCHFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDVNG--NRIDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQ H+++F+ED+F E +KYGEIE +NVCDNL DH+VGNVY++FR EE A A+++L R
Sbjct: 74 MQAHFEDFYEDLFEEL-NKYGEIESLNVCDNLSDHMVGNVYVQFREEEQAGNALHNLQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS LRR LY R K
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEEETCKRGGYCNFMHLKSISSGLRRQLYGRYKNRH 192
Query: 181 RRSRSRS 187
SRSRS
Sbjct: 193 IHSRSRS 199
>gi|426388322|ref|XP_004060590.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 181
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 120/173 (69%), Gaps = 41/173 (23%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNK TFSQ
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKSTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED + AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGQWAVAELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+ V+ ELSPVTDFRE+CCRQYEMGECTR GFCNFMHL+PIS+ L+R LY
Sbjct: 95 WFNGQAVHVELSPVTDFRESCCRQYEMGECTRGGFCNFMHLQPISQNLQRQLY 147
>gi|449682646|ref|XP_002156010.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Hydra
magnipapillata]
Length = 190
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/135 (75%), Positives = 117/135 (86%), Gaps = 2/135 (1%)
Query: 36 LYINPQNSAKSAD--GSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG 93
++ NPQN A + + S+ S + D E QEHYDNFFEDVF+E E KYGEIEEMNVCDNLG
Sbjct: 1 MFQNPQNLAVTNEFGQSNAASIMNDVEAQEHYDNFFEDVFLELEAKYGEIEEMNVCDNLG 60
Query: 94 DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRS 153
DHLVGNVY+KFR EEDAEKAV+++NNRW+ G+P+YAELSPVTDFRE+CCRQYEMGECTR
Sbjct: 61 DHLVGNVYVKFRFEEDAEKAVDNVNNRWYNGQPIYAELSPVTDFRESCCRQYEMGECTRG 120
Query: 154 GFCNFMHLKPISREL 168
GFCNFMHLKPISREL
Sbjct: 121 GFCNFMHLKPISREL 135
>gi|324505367|gb|ADY42309.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 275
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 129/176 (73%), Gaps = 1/176 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHG++CSR H P+FSQT+LL NLY NP + AD D+E
Sbjct: 24 VNCSFYFKIGACRHGEKCSRTHIMPSFSQTVLLKNLYHNPLIDTRQADAFAKAGQQNDQE 83
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q + F E EDK+G I+EMNVCDN+G+H++GNVY+KF EEDA+K V L++R
Sbjct: 84 QQYFEEFFEELFVEL-EDKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLDDR 142
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 176
WF G P+YAELSPVTDFREACCRQYE+G C + FCNFMHLK ISR+LRR LY R
Sbjct: 143 WFNGCPIYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYGSR 198
>gi|224034457|gb|ACN36304.1| unknown [Zea mays]
Length = 276
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 134/191 (70%), Gaps = 7/191 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HNKP+ S T+LL N+Y P D + + E
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQG--NPIDPER 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +++F+ED+FVE K+GEIE ++VCDNL DH++GNVY++FR EE A +A+ L R
Sbjct: 74 IQEDFEDFYEDIFVEL-SKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS- 179
++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K + R+LRR L+ RS
Sbjct: 133 YYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSL 192
Query: 180 ---SRRSRSRS 187
SR SRS S
Sbjct: 193 RSHSRGSRSPS 203
>gi|115465463|ref|NP_001056331.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|75323083|sp|Q6AUG0.1|U2AFB_ORYSJ RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 38; Short=OsC3H38
gi|50511477|gb|AAT77399.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa Japonica
Group]
gi|113579882|dbj|BAF18245.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|215687259|dbj|BAG91824.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740784|dbj|BAG96940.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632568|gb|EEE64700.1| hypothetical protein OsJ_19555 [Oryza sativa Japonica Group]
Length = 304
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S TI+L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GE+E +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I RELRR LY
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
>gi|226502062|ref|NP_001140674.1| uncharacterized protein LOC100272749 [Zea mays]
gi|194700362|gb|ACF84265.1| unknown [Zea mays]
gi|194700522|gb|ACF84345.1| unknown [Zea mays]
gi|223975941|gb|ACN32158.1| unknown [Zea mays]
gi|407232750|gb|AFT82717.1| C3H40 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414886043|tpg|DAA62057.1| TPA: splicing factor U2af subunit isoform 1 [Zea mays]
gi|414886044|tpg|DAA62058.1| TPA: splicing factor U2af subunit isoform 2 [Zea mays]
gi|414886045|tpg|DAA62059.1| TPA: splicing factor U2af subunit isoform 3 [Zea mays]
gi|414886046|tpg|DAA62060.1| TPA: splicing factor U2af subunit isoform 4 [Zea mays]
gi|414886047|tpg|DAA62061.1| TPA: splicing factor U2af subunit isoform 5 [Zea mays]
gi|414886048|tpg|DAA62062.1| TPA: splicing factor U2af subunit isoform 6 [Zea mays]
gi|414886049|tpg|DAA62063.1| TPA: splicing factor U2af subunit isoform 7 [Zea mays]
gi|414886050|tpg|DAA62064.1| TPA: splicing factor U2af subunit isoform 8 [Zea mays]
Length = 287
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 134/191 (70%), Gaps = 7/191 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HNKP+ S T+LL N+Y P D + + E
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQG--NPIDPER 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +++F+ED+FVE K+GEIE ++VCDNL DH++GNVY++FR EE A +A+ L R
Sbjct: 74 IQEDFEDFYEDIFVEL-SKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS- 179
++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K + R+LRR L+ RS
Sbjct: 133 YYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSL 192
Query: 180 ---SRRSRSRS 187
SR SRS S
Sbjct: 193 RSHSRGSRSPS 203
>gi|409044918|gb|EKM54399.1| hypothetical protein PHACADRAFT_174897 [Phanerochaete carnosa
HHB-10118-sp]
Length = 226
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 130/172 (75%), Gaps = 9/172 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP FSQTILL N+Y NP + + +T++E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDP--------VCKLTEKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQTAVDNLNDR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S EL R L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPELVRSL 178
>gi|3850816|emb|CAA77132.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 301
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S TI+L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GE+E +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I RELRR LY
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
>gi|71019619|ref|XP_760040.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
gi|46099833|gb|EAK85066.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
Length = 279
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 136/189 (71%), Gaps = 8/189 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H +P +S T+LL N+Y NP++ + +TD E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRHHEQDC-------TITDTE 68
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q +D F+ED+F E KYG++ EM+VCDN+GDHL+GNVY +++ E DA++AV+ LN+R
Sbjct: 69 LQAQFDAFYEDMFTELA-KYGQLVEMHVCDNVGDHLIGNVYARYKYEADAQRAVDALNDR 127
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
W+ +P++AELSPVTDF+EACCRQ E EC R GFCNFMHL+ SR +R+ L +
Sbjct: 128 WYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASRPIRKELNHQLAVEL 187
Query: 181 RRSRSRSRD 189
RR + RD
Sbjct: 188 RRRKEEGRD 196
>gi|449546411|gb|EMD37380.1| hypothetical protein CERSUDRAFT_114053 [Ceriporiopsis subvermispora
B]
Length = 230
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 129/168 (76%), Gaps = 9/168 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP FSQTILL N+Y NP + + +T++E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDP--------VCKLTEKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
>gi|392578781|gb|EIW71908.1| hypothetical protein TREMEDRAFT_58042 [Tremella mesenterica DSM
1558]
Length = 228
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 136/184 (73%), Gaps = 10/184 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHGDRCSR H KP FS TILL N+Y NP ++ + N+T E+
Sbjct: 16 VNCSFYLKIGACRHGDRCSRKHIKPQFSSTILLPNVYNNPAHTPEG-------QNMTPEQ 68
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q+++DNF+ED F+E C KYG ++EM+VCDN+GDHL+GNVY ++ E +A KA + LN+
Sbjct: 69 LQQNFDNFYEDFFIELC--KYGNLQEMHVCDNVGDHLMGNVYARYEYETEASKACDALND 126
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
+W+ +P+ AELSPV+DFREACCRQ EMGEC R GFCNFMHL S+ L L + ++ S
Sbjct: 127 KWYAMKPLMAELSPVSDFREACCRQNEMGECVREGFCNFMHLCHPSKSLVSSLQASQRLS 186
Query: 180 SRRS 183
RR+
Sbjct: 187 RRRN 190
>gi|66811624|ref|XP_639991.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466958|gb|EAL65002.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 471
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 128/179 (71%), Gaps = 1/179 (0%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEM 61
NC FY KIGACRHGDRCSR+HNKP SQTILL NLY +P + N++D E+
Sbjct: 17 NCPFYLKIGACRHGDRCSRLHNKPVLSQTILLPNLYQSPISKKAIEAAGGQAPNLSDAEL 76
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
Q+H+D F+ED++ E KYG+++ +NVC NLGDHLVGNVY+K+++E+DA +++ L R+
Sbjct: 77 QQHFDEFYEDIY-EGLAKYGQVDLLNVCANLGDHLVGNVYVKYQKEDDANESIKGLKGRF 135
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
+ GRP+ +E SPVTDF EA CRQY++G C R GFCNFMHL S+ L L+ RK S
Sbjct: 136 YDGRPIISEFSPVTDFTEARCRQYDIGTCNRGGFCNFMHLHNPSKSLYYKLFGDRKSRS 194
>gi|195622372|gb|ACG33016.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195639644|gb|ACG39290.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 284
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 133/189 (70%), Gaps = 7/189 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HNKP+ S T+LL N+Y P D + + E
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQG--NPIDPER 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +++F+ED+FVE K+GEIE ++VCDNL DH++GNVY++FR EE A +A+ L R
Sbjct: 74 IQEDFEDFYEDIFVEL-SKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS- 179
++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K + R+LRR L+ RS
Sbjct: 133 YYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSL 192
Query: 180 ---SRRSRS 185
SR SRS
Sbjct: 193 RSHSRGSRS 201
>gi|357132564|ref|XP_003567899.1| PREDICTED: splicing factor U2af small subunit B-like [Brachypodium
distachyon]
Length = 308
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S TI+L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTTSPTIVLANMYQRPDMITPGVDAQG--HTIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GE+E +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I RELRR LY
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
>gi|395333024|gb|EJF65402.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 230
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 129/172 (75%), Gaps = 9/172 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP FSQTILL N+Y NP + + T++E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDP--------VCTKTEKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S EL R L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPELVRSL 178
>gi|336371539|gb|EGN99878.1| hypothetical protein SERLA73DRAFT_180138 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384299|gb|EGO25447.1| hypothetical protein SERLADRAFT_465605 [Serpula lacrymans var.
lacrymans S7.9]
Length = 230
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 129/168 (76%), Gaps = 9/168 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H +P FSQTILL N+Y NP + + +T++E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDP--------VCKLTEQE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
>gi|392593590|gb|EIW82915.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 231
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 130/172 (75%), Gaps = 9/172 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H +P FSQTILL N+Y NP + + +T++E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDP--------VCKLTEKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY +F E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARFEWETEAQAAVDNLNDR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S +L R L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASADLVRSL 178
>gi|359482307|ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
vinifera]
Length = 343
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTPGVDPQG--QPLDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR EE A A+ +LN R
Sbjct: 74 IQEHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISRELRRQLFG 186
>gi|2130488|pir||JC6068 U2 auxiliary factor small chain - fission yeast
(Schizosaccharomyces pombe)
Length = 200
Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 127/178 (71%), Gaps = 9/178 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHG+RCSR H KP FSQTIL N+Y NP + T E
Sbjct: 16 VNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIHEPNG-------KKFTQRE 68
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ E +D F+ED+F E KYGE+E++ VCDN+GDHLVGNVY++F+ EE A+ A++DLN+R
Sbjct: 69 LAEQFDAFYEDMFCEF-SKYGEVEQLVVCDNVGDHLVGNVYVRFKYEESAQNAIDDLNSR 127
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL-KPISRELRRYLYSRRK 177
W+ RPVYAELSPVTDFREACCRQ+E EC R G CNFMH KP + R+ S +K
Sbjct: 128 WYSQRPVYAELSPVTDFREACCRQHETSECQRGGLCNFMHAKKPSPQSFTRFGTSTKK 185
>gi|330835935|ref|XP_003292017.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
gi|325077756|gb|EGC31448.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
Length = 429
Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 132/186 (70%), Gaps = 6/186 (3%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEM 61
NC FY KIGACRHGDRCSR+HNKP SQTILL NLY +P + + N+T+ E+
Sbjct: 17 NCPFYLKIGACRHGDRCSRLHNKPVISQTILLPNLYQSPISKKAIEQNGGVAPNLTEVEL 76
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
Q+H+D F+ED+F E KYG+++ +NVC NLGDHLVGNVY+K+ RE++A +++ L R+
Sbjct: 77 QQHFDEFYEDIF-EGLTKYGQVDLLNVCANLGDHLVGNVYVKYAREDEANESIKGLKGRF 135
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR 181
+ GRP+ AE SPVTDF EA CRQY++G C R G+CNFMHL S+ L+ L+ R
Sbjct: 136 YDGRPIIAEFSPVTDFTEARCRQYDIGACNRGGYCNFMHLHTPSKSLQIKLF-----GDR 190
Query: 182 RSRSRS 187
RSRS S
Sbjct: 191 RSRSPS 196
>gi|380793475|gb|AFE68613.1| splicing factor U2AF 35 kDa subunit isoform a, partial [Macaca
mulatta]
Length = 155
Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|294463000|gb|ADE77038.1| unknown [Picea sitchensis]
Length = 334
Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H +P+ S TILL N+Y P D + ++
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTRPSISPTILLSNMYQRPDMITPGMDPQGHA--LDPQK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++F+ED+F E KYGEIE +NVCDNL DH+VGNVY++FR EE A A+ L R
Sbjct: 74 IQEHFEDFYEDLFEEL-GKYGEIESLNVCDNLADHMVGNVYVQFREEEHAAAALQALTGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
++ GR + + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+ R +R
Sbjct: 133 FYAGRAIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRQLFGRYRR 190
>gi|242058279|ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
gi|241930260|gb|EES03405.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
Length = 288
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 131/188 (69%), Gaps = 4/188 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++L+N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLVNMYQRPDMITPGVDAQG--QPIDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIYEEL-SKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMH+K I R+LR+ ++ KR
Sbjct: 133 FYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRDLRKKMFGHYKRPY 192
Query: 181 R-RSRSRS 187
R RSRS S
Sbjct: 193 RGRSRSPS 200
>gi|298714129|emb|CBJ27310.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 467
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 127/172 (73%), Gaps = 3/172 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGDRCSR H+KP FSQTIL+ NLY NP ++ +A G S + +
Sbjct: 75 VNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAVMAAGGD--PSQLPKDH 132
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+ +++FFE+V+ E K+GEI EMNVCDNLGDHL+GNVY+KF EEDA+ A+ L R
Sbjct: 133 VQDDFEDFFEEVYQELS-KFGEISEMNVCDNLGDHLIGNVYVKFLDEEDADSALKGLMGR 191
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ RP+ E SPVTDFREA CRQ++ G C R G CNFMH+KP+ R + YL
Sbjct: 192 WYASRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYL 243
>gi|68800138|ref|NP_001020375.1| splicing factor U2AF 35 kDa subunit isoform c [Homo sapiens]
gi|194226294|ref|XP_001490926.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Equus caballus]
gi|332263381|ref|XP_003280725.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Nomascus
leucogenys]
gi|332872229|ref|XP_003319152.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
troglodytes]
gi|338720813|ref|XP_003364254.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Equus caballus]
gi|345795464|ref|XP_535599.3| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Canis
lupus familiaris]
gi|359323577|ref|XP_003640136.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Canis
lupus familiaris]
gi|397506805|ref|XP_003823907.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
paniscus]
gi|397506807|ref|XP_003823908.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
paniscus]
gi|403271413|ref|XP_003927619.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Saimiri boliviensis
boliviensis]
gi|410969865|ref|XP_003991412.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Felis
catus]
gi|410969867|ref|XP_003991413.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Felis
catus]
gi|441672637|ref|XP_004092374.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
gi|33341702|gb|AAQ15222.1|AF370386_1 FP793 [Homo sapiens]
gi|119629906|gb|EAX09501.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629909|gb|EAX09504.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629910|gb|EAX09505.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
Length = 167
Score = 214 bits (546), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 106/113 (93%)
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|213401493|ref|XP_002171519.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|211999566|gb|EEB05226.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 214 bits (546), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 130/178 (73%), Gaps = 8/178 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHG+RCSR H KP +SQT+L NLY NP G H+ + E
Sbjct: 16 VNCSFYYKIGACRHGERCSRKHVKPNYSQTVLCPNLYKNP---IHEDSGKHM----SQAE 68
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ E +D F+ED+F E KYGE+E++ VCDN+GDHL+GNVY++F+ EE A+ A++DLN+R
Sbjct: 69 LDEQFDAFYEDMFCEFA-KYGEVEQIVVCDNIGDHLIGNVYVRFKYEESAQNAIDDLNSR 127
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
W+ +PVYAELSPVTDFREACCRQ+E EC R G CNFMH K S L R L + +++
Sbjct: 128 WYSQKPVYAELSPVTDFREACCRQHETSECGRGGLCNFMHAKKPSPHLIRELMAAQRK 185
>gi|389741909|gb|EIM83097.1| splicing factor U2AF subunit [Stereum hirsutum FP-91666 SS1]
Length = 230
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 128/168 (76%), Gaps = 9/168 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP FSQTILL N+Y NP + + +T +E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDP--------VCKLTPKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+ +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQDGFDAVYEDLYCEL-SKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
>gi|353245348|emb|CCA76358.1| related to splicing factor U2AF 35 kd subunit [Piriformospora
indica DSM 11827]
Length = 217
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 128/172 (74%), Gaps = 9/172 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H +P FSQTILL N+Y NP N ++ +E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPANDPNC--------KLSAKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY +F E +A+ AV++LN R
Sbjct: 68 LQEGFDAVYEDLYCEL-TKFGHLLELHVCDNVGDHLIGNVYARFEWETEAQAAVDNLNER 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S EL++ L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPELKKSL 178
>gi|356543538|ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 315
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 125/176 (71%), Gaps = 5/176 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADG-SHLISNVTDE 59
VNC FYFKIGACRHGDRCSR+H KP+ S TILL N+Y P D H I
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITPGVDAHGHPID---PR 72
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
++Q+H++ F+ED+F E KYG+IE +NVCDNL DH+VGNVY++FR EE A AV +L
Sbjct: 73 KIQDHFEEFYEDLFDELS-KYGDIESLNVCDNLADHMVGNVYVQFREEEHAANAVRNLTG 131
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+ +
Sbjct: 132 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRELRRQLFGK 187
>gi|392570233|gb|EIW63406.1| splicing factor U2AF subunit [Trametes versicolor FP-101664 SS1]
Length = 230
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 129/172 (75%), Gaps = 9/172 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP FSQTILL N+Y NP + + T++E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDP--------VCTKTEKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ + +L R L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLPTPDLARSL 178
>gi|357438827|ref|XP_003589690.1| Splicing factor U2af small subunit B [Medicago truncatula]
gi|355478738|gb|AES59941.1| Splicing factor U2af small subunit B [Medicago truncatula]
Length = 272
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 130/188 (69%), Gaps = 3/188 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDIITPGVDPNG--QPIDPRQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E K+G +E +NVCDNL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQQHFEDFYEDIFTEL-SKFGYVETLNVCDNLADHMIGNVYVLFKEEDHAAAALASLRGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K I RELRR L+S ++R +
Sbjct: 133 FYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRELRRKLFSSQRREA 192
Query: 181 RRSRSRSR 188
R R
Sbjct: 193 EAENERGR 200
>gi|13278055|gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
Length = 310
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 126/174 (72%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITPGVDPQG--QPLDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR EE A +A+ +L+ R
Sbjct: 74 IQQHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAGEALRNLSGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFG 186
>gi|402224397|gb|EJU04460.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 272
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 130/172 (75%), Gaps = 9/172 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP FSQTILL N+Y NP + ++ +E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLNNVYHNPAHDPNC--------KLSSQE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+++D +ED+++E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV+ LN+R
Sbjct: 68 LQDNFDQLYEDLYIELS-KFGHLLELHVCDNIGDHLIGNVYARYEWEAEAQAAVDALNDR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ GRP+YAELSPVTDFREACCRQ E GEC R G+CNFMHL+ S++L + L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGYCNFMHLRIASKDLVKSL 178
>gi|443916710|gb|ELU37680.1| splicing factor U2AF 26 kDa subunit [Rhizoctonia solani AG-1 IA]
Length = 517
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 128/168 (76%), Gaps = 9/168 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H +P FSQTILL N+Y NP ++ + ++++
Sbjct: 302 VNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHNPSA--------TYSEDQ 353
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+ +D +ED++ E KYG + E++VCDN+GDHL+GNVY ++ E +A+ AV+ LNNR
Sbjct: 354 LQQDFDTTYEDLYCELA-KYGNLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDALNNR 412
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S++L
Sbjct: 413 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKKL 460
>gi|393217218|gb|EJD02707.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 231
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 129/168 (76%), Gaps = 9/168 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H +P FSQTILL N+Y NP + + +T+++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDP--------VCKLTEKD 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWEAEAQAAVDNLNDR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
>gi|443897457|dbj|GAC74797.1| U2 snRNP splicing factor, small subunit, and related proteins
[Pseudozyma antarctica T-34]
Length = 271
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 129/172 (75%), Gaps = 8/172 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H +P +S T+LL N+Y NP++ + +TD E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRHHEQDC-------AITDAE 68
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q +D F+ED+F E KYGE++EM+VCDN+GDHL+GNVY +++ E DA+ AV+ LN+R
Sbjct: 69 LQAQFDEFYEDMFCELA-KYGELQEMHVCDNVGDHLIGNVYARYKYEADAQLAVDALNDR 127
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ +P++AELSPVTDF+EACCRQ E EC R GFCNFMHL+ S LR+ L
Sbjct: 128 WYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASAPLRKQL 179
>gi|388858152|emb|CCF48220.1| related to splicing factor U2AF 35 kd subunit [Ustilago hordei]
Length = 284
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 134/191 (70%), Gaps = 12/191 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H +P +S T+LL N+Y NP++ +TD E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRHHEPDC-------TITDTE 68
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+ +D F+ED+F E KYGE+ EM+VCDN+GDHL+GNVY +++ E DA+ AV+ LN+R
Sbjct: 69 LQQQFDAFYEDMFTELA-KYGELVEMHVCDNVGDHLIGNVYARYKYETDAQLAVDALNDR 127
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLK----PISRELRRYLYSRR 176
W+ G+P++AELSPVTDF+EACCRQ E EC R GFCNFMHL+ P +EL L
Sbjct: 128 WYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASAPTRKELNHQLAVEL 187
Query: 177 KRSSRRSRSRS 187
++ RS +
Sbjct: 188 RKRKEEGRSTA 198
>gi|297727107|ref|NP_001175917.1| Os09g0491756 [Oryza sativa Japonica Group]
gi|75338870|sp|Q9ZQW8.1|U2AFA_ORYSJ RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=OsC3H60
gi|3850818|emb|CAA77133.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
gi|125564203|gb|EAZ09583.1| hypothetical protein OsI_31864 [Oryza sativa Indica Group]
gi|125606167|gb|EAZ45203.1| hypothetical protein OsJ_29848 [Oryza sativa Japonica Group]
gi|215692945|dbj|BAG88365.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704518|dbj|BAG94151.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679017|dbj|BAH94645.1| Os09g0491756 [Oryza sativa Japonica Group]
Length = 290
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HNKP+ S T+LL N+Y+ P D + + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITPGIDAQG--NPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q +++F+ED+F E KYGEIE ++VCDN DH++GNVY++FR E+ A +A+ L R
Sbjct: 74 IQADFEDFYEDIFEELS-KYGEIESLHVCDNFADHMIGNVYVQFREEDQAARALQALTGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY-----SR 175
++ GRP+ E SPV+DFREA CRQYE C R G+CNFMH+K I R+LR+ L+ SR
Sbjct: 133 YYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDLRKRLFGHLHRSR 192
Query: 176 RKRSSRRSRSRS 187
R S RSRS S
Sbjct: 193 RSHSHGRSRSPS 204
>gi|3850819|emb|CAA77134.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 274
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HNKP+ S T+LL N+Y+ P D + + E+
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITPGIDAQG--NPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q +++F+ED+F E KYGEIE ++VCDN DH++GNVY++FR E+ A +A+ L R
Sbjct: 74 IQADFEDFYEDIFEEL-SKYGEIESLHVCDNFADHMIGNVYVQFREEDQAARALQALTGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY-----SR 175
++ GRP+ E SPV+DFREA CRQYE C R G+CNFMH+K I R+LR+ L+ SR
Sbjct: 133 YYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDLRKRLFGHLHRSR 192
Query: 176 RKRSSRRSRSRS 187
R S RSRS S
Sbjct: 193 RSHSHGRSRSPS 204
>gi|169846828|ref|XP_001830128.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
gi|116508898|gb|EAU91793.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
Length = 230
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 127/172 (73%), Gaps = 9/172 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP FSQTILL N+Y NP + + +T++E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDP--------VCKLTEKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV+ N R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDSCNER 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S EL R L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLPSPELLRQL 178
>gi|302679412|ref|XP_003029388.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
gi|300103078|gb|EFI94485.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
Length = 228
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 128/168 (76%), Gaps = 9/168 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H +P FSQTILL N+Y NP + + + ++E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDP--------VCKLNEKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLNDR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
>gi|238586680|ref|XP_002391246.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
gi|215455659|gb|EEB92176.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
Length = 249
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 128/168 (76%), Gaps = 9/168 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGA RHGDRCSR H +P FSQTILL N+Y NP + + +T++E
Sbjct: 21 VNCSFYYKIGAWRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDP--------VCKLTEKE 72
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV++LN+R
Sbjct: 73 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQTAVDNLNDR 131
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S+EL
Sbjct: 132 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 179
>gi|170117299|ref|XP_001889837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635177|gb|EDQ99488.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 229
Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 135/187 (72%), Gaps = 9/187 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP FSQTILL N+Y NP + + +T++E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDP--------VCKLTEKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV+ N R
Sbjct: 68 LQEGFDAVYEDLYCEL-SKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDSCNER 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S++L L + ++
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKDLVSSLRAGQRLER 186
Query: 181 RRSRSRS 187
R + S++
Sbjct: 187 RLNPSKN 193
>gi|328861623|gb|EGG10726.1| hypothetical protein MELLADRAFT_42160 [Melampsora larici-populina
98AG31]
Length = 244
Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 134/189 (70%), Gaps = 10/189 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHG+RCSR H KPTFSQT ++ N+Y NP + +++ E
Sbjct: 16 VNCSFYLKIGACRHGERCSRKHIKPTFSQTFVIANMYQNPAHDPNC--------KLSEAE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ +++ F+EDVF E KYG + EM+VCDN+GDHL+GNVY ++ E++A+ AV+ N R
Sbjct: 68 LASYFETFYEDVFCELV-KYGNLLEMHVCDNVGDHLIGNVYARYEWEDEAQIAVDAFNQR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
W+ GRP++AELSPVTDFREACCRQ +MGEC R GFCNFMHLK L R L++ ++R
Sbjct: 127 WYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFCNFMHLKEPRSSLVRELHA-QQRVE 185
Query: 181 RRSRSRSRD 189
R+ +RD
Sbjct: 186 RKLNPSARD 194
>gi|403169415|ref|XP_003328862.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167949|gb|EFP84443.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 278
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 130/177 (73%), Gaps = 9/177 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHG+RCSR H KPTFSQT+++ N+Y NP + +++ E
Sbjct: 16 VNCSFYLKIGACRHGERCSRKHIKPTFSQTLVIANMYQNPAHDPNC--------KLSEAE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ +++ F+EDVF E KYG + EM+VCDN+GDHL+GNVY ++ E++A+ AV+ N R
Sbjct: 68 LTSYFETFYEDVFCELV-KYGNLLEMHVCDNVGDHLIGNVYARYDWEDEAQIAVDAFNQR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
W+ GRP++AELSPVTDFREACCRQ +MGEC R GFCNFMHLK L R L+++++
Sbjct: 127 WYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFCNFMHLKEPRSSLVRELHAQQR 183
>gi|388506242|gb|AFK41187.1| unknown [Lotus japonicus]
Length = 318
Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 131/182 (71%), Gaps = 5/182 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNS----AKSADGSHLISNV 56
VNC FYFKIGACRHGDRCSR+H KPT S T++L N+Y P + + H +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNIITQPNQPQHQPQPL 75
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
+++Q+H+D+F+ED+F E KYG+I+ +N+CDNL DH+VGNVY++++ E+ A A+ +
Sbjct: 76 DPDKLQDHFDDFYEDLFQELS-KYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALTN 134
Query: 117 LNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 176
L R++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+ R
Sbjct: 135 LTGRFYSGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRRLFGRN 194
Query: 177 KR 178
KR
Sbjct: 195 KR 196
>gi|31455228|gb|AAH05915.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|312151474|gb|ADQ32249.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
Length = 167
Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 98/113 (86%), Positives = 105/113 (92%)
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEHYD FFE+VF E E+KY E+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV DLNNR
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYREVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
WF G+P++AELSPVTDFREACCRQYEMGECTR GFCNFMHLKPISRELRR LY
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|356574563|ref|XP_003555415.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 268
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 127/180 (70%), Gaps = 3/180 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+P+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITPGVDPQG--QTLDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A KA++ L R
Sbjct: 74 IQQHFEDFYEDIFTELA-KFGEIESLNVCDNLADHMIGNVYVQFREEDQAAKALHALRGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ RP+ A+ SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR L+ R R
Sbjct: 133 FYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDLRRRLFGRNHRGG 192
>gi|409080647|gb|EKM81007.1| hypothetical protein AGABI1DRAFT_71717 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197561|gb|EKV47488.1| hypothetical protein AGABI2DRAFT_221673 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 127/172 (73%), Gaps = 9/172 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP FSQTILL N+Y NP + I +T++E
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDP--------ICKLTEKE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D +ED++ E K+G + E++VCDN+GDHL+GNVY ++ E +A+ AV+ N R
Sbjct: 68 LQEGFDAVYEDLYCELA-KFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDSCNER 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
W+ GRP+YAELSPVTDFREACCRQ E GEC R GFCNFMHL+ S +L + L
Sbjct: 127 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRNASPDLVKQL 178
>gi|302846943|ref|XP_002955007.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
gi|300259770|gb|EFJ43995.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
Length = 288
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 128/176 (72%), Gaps = 4/176 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ-NSAKSADGSHLISNVTDE 59
VNC FYFKIGACRHGDRCSR+HN+PT S TIL+ N+Y NP N+ DG L V +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTILMANMYQNPLLNAPLGPDG--LPIRVDPK 73
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
QEH+++F+EDVF E ++GE+E +NVCDN DH+VGNVY KFR E+ A +A+ L
Sbjct: 74 AAQEHFEDFYEDVFEELA-QHGELENLNVCDNFADHMVGNVYAKFRDEDAAARALQALQG 132
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
R++ GRP+ E SPVTDFREA CRQYE C R G+CNFMHLKPI RELRR L+ R
Sbjct: 133 RYYDGRPIVVEFSPVTDFREATCRQYEENTCNRGGYCNFMHLKPIGRELRRKLFGR 188
>gi|449443402|ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
gi|449510609|ref|XP_004163713.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 326
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 124/174 (71%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQG--NPIDPRN 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H++ F+ED+F E +KYGEIE +NVCDNL DH+VGNVY++FR EE A A+ +L+ R
Sbjct: 74 IQDHFEEFYEDLFQEL-NKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLSGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK I RELR L++
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGRELRHELFA 186
>gi|224086130|ref|XP_002307825.1| predicted protein [Populus trichocarpa]
gi|222857274|gb|EEE94821.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 124/175 (70%), Gaps = 3/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNTYHRPDMITPGVDAQG--QPLDPHK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 74 IQEHFEDFYEDIFEEL-SKFGEIENLNVCDNLADHMIGNVYVQFKEEDQAAAALQSLQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K I ++LRR L+ R
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDLRRKLFGR 187
>gi|356521086|ref|XP_003529189.1| PREDICTED: splicing factor U2af small subunit A-like isoform 1
[Glycine max]
gi|356521088|ref|XP_003529190.1| PREDICTED: splicing factor U2af small subunit A-like isoform 2
[Glycine max]
gi|356521090|ref|XP_003529191.1| PREDICTED: splicing factor U2af small subunit A-like isoform 3
[Glycine max]
Length = 271
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 128/180 (71%), Gaps = 3/180 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+P+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITPGVDPQG--QPLDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E K+G+IE +NVCDNL DH++GNVY++FR E+ A KA++ L+ R
Sbjct: 74 IQQHFEDFYEDIFTELA-KFGDIESLNVCDNLADHMIGNVYVQFREEDQAAKALHALHGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ RP+ A+ SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR L+ R R
Sbjct: 133 FYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDLRRRLFGRHHRGG 192
>gi|193875780|gb|ACF24526.1| mRNA splicing factor U2 associated factor [Gymnochlora stellata]
Length = 182
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 132/180 (73%), Gaps = 4/180 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAK-SADGSHLISNVTDE 59
VNC FYFKIGACRHGD+CSR+HN+P SQT+L +N+Y NP +A DG L +
Sbjct: 4 VNCPFYFKIGACRHGDKCSRMHNRPATSQTLLFINMYQNPALTAPLGKDG--LPKPLNPY 61
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+ F++D++ E + +G+IE +NVCDNL DH++GNVY+K+R+E+ A KA+ +N
Sbjct: 62 NLQSHFQKFYKDIYEEL-NFFGDIENLNVCDNLSDHMIGNVYVKYRQEKSAMKALKSING 120
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
R++ GR + AE SPVTDFRE+ CRQY+ C+R G+CNFMHLKPI R LR+ L++R +S
Sbjct: 121 RFYAGRIIVAETSPVTDFRESTCRQYDDNTCSRGGYCNFMHLKPIKRSLRKELFTRVTKS 180
>gi|412985218|emb|CCO20243.1| predicted protein [Bathycoccus prasinos]
Length = 307
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 127/176 (72%), Gaps = 2/176 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHG+RCSR+HNKPT SQT+LL+N+Y +P+ + + ++
Sbjct: 16 VNCPFYFKIGACRHGERCSRLHNKPTVSQTLLLINMYQSPEQARLLGGNAQGARTSEPQD 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEHY++F D+F E +GEIEE+NVCDNL DH+VGNVY+KF E+DA KA L+ R
Sbjct: 76 VQEHYEDFCHDIFEELA-IHGEIEELNVCDNLADHMVGNVYVKFADEDDAMKAKQSLDGR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE-LRRYLYSR 175
++ GRP+ E SPVTDFRE+ CRQYE CTR G+CNFMH++PI + L L+ R
Sbjct: 135 YYMGRPIKCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHVRPIKNQTLAHALFGR 190
>gi|325180898|emb|CCA15308.1| splicing factor U2AF 35 kDa subunit putative [Albugo laibachii
Nc14]
Length = 331
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 137/192 (71%), Gaps = 11/192 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP--QNSAKSADGSHLISNVTD 58
VNC FYFKIGACRHGDRCSR+HNKP FSQTIL+ ++Y NP Q A++ D S L D
Sbjct: 65 VNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQIIAQNGDPSGLDQKKVD 124
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
E+ ++ Y+ FE++ C K+G++EE+N+CDNLGDHLVGNVY+K+ EE A A L
Sbjct: 125 EDFEDFYEEVFEEL---C--KFGKVEELNICDNLGDHLVGNVYVKYEDEEHAAAAQKSLY 179
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR---YLYSR 175
R++ GRP+ E SPVTDFREA CRQ++ G C R G+CNFMH+K +SR ++R LY+R
Sbjct: 180 GRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHVKTVSRSMQRELERLYNR 239
Query: 176 RKRSSRRSRSRS 187
K RR +SRS
Sbjct: 240 YK-PPRRGKSRS 250
>gi|340924092|gb|EGS18995.1| putative splicing factor [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 209
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 132/189 (69%), Gaps = 12/189 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ NLY NP + K + +++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAHDPKC--------RMNEQQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA KA DLN+
Sbjct: 68 LQNHFDAFYEDIWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAAKACEDLNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKR 178
RW+ RPVY ELSPVTDFREACCR C R GFCNF+H K S EL R L + +K
Sbjct: 126 RWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELERELQLATKKW 185
Query: 179 SSRRSRSRS 187
+ RSRS
Sbjct: 186 LKMKPRSRS 194
>gi|255575357|ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 313
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 122/168 (72%), Gaps = 1/168 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P D ++ +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMLTPGVDPQAQSQSLDPRK 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F++D+F E KYG+IE +N+CDNL DH+VGNVY++FR E+ A A+ +LN R
Sbjct: 76 IQDHFEDFYQDLFEELS-KYGDIESLNICDNLADHMVGNVYVQFREEDHAANALRNLNGR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISREL
Sbjct: 135 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 182
>gi|116788026|gb|ABK24730.1| unknown [Picea sitchensis]
Length = 312
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 120/168 (71%), Gaps = 5/168 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE- 59
VNC FYFKIGACRHGDRCSR+H +PT S TILL N+Y P D + + D
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTRPTISPTILLSNMYQRPDMVTPGMD---IQGHAMDPR 72
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
++QEH+++F+ED+F E KYGE+E +NVCDNL DH+VGNVY++FR EE A A+ L
Sbjct: 73 KIQEHFEDFYEDLFEEL-GKYGELESLNVCDNLADHMVGNVYVQFREEEQAANALRSLQG 131
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRE
Sbjct: 132 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRE 179
>gi|224286856|gb|ACN41131.1| unknown [Picea sitchensis]
Length = 312
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 120/168 (71%), Gaps = 5/168 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE- 59
VNC FYFKIGACRHGDRCSR+H +PT S TILL N+Y P D + + D
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTRPTISPTILLSNMYQRPDMVTPGMD---IQGHAMDPR 72
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
++QEH+++F+ED+F E KYGE+E +NVCDNL DH+VGNVY++FR EE A A+ L
Sbjct: 73 KIQEHFEDFYEDLFEEL-GKYGELESLNVCDNLADHMVGNVYVQFREEEQAANALRSLQG 131
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRE
Sbjct: 132 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRE 179
>gi|357135864|ref|XP_003569528.1| PREDICTED: splicing factor U2af small subunit B-like isoform 1
[Brachypodium distachyon]
gi|357135866|ref|XP_003569529.1| PREDICTED: splicing factor U2af small subunit B-like isoform 2
[Brachypodium distachyon]
gi|357135868|ref|XP_003569530.1| PREDICTED: splicing factor U2af small subunit B-like isoform 3
[Brachypodium distachyon]
Length = 281
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 122/174 (70%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSRIHN+PT S TI+L+N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITPGVDAQG--QPIDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEEL-SKFGEIETLNVCDNLSDHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
++ GR + + SPVTDFREA CRQYE CTR G CNFMH+K I ++LR+ L+
Sbjct: 133 FYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNFMHVKQIGKDLRKKLFG 186
>gi|224068961|ref|XP_002326241.1| predicted protein [Populus trichocarpa]
gi|222833434|gb|EEE71911.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 121/168 (72%), Gaps = 1/168 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H KPT S T+LL N+Y P D ++ +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPTISPTLLLSNMYQRPDMLTPGVDPQAQSQSLDPRK 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E KYG+IE +N+CDNL DH+VGNVY++FR EE A A+ +LN R
Sbjct: 76 IQDHFEDFYEDLFEELS-KYGDIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR L
Sbjct: 135 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRWL 182
>gi|326498815|dbj|BAK02393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 281
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 122/174 (70%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSRIHN+PT S TI+L+N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITPGVDAQG--QPIDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEEL-SKFGEIETLNVCDNLSDHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
++ GR + + SPVTDFREA CRQYE CTR G CNFMH+K I ++LR+ L+
Sbjct: 133 FYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNFMHVKQIGKDLRKKLFG 186
>gi|403348419|gb|EJY73647.1| U2 snRNP auxiliary factor, small subunit, putative [Oxytricha
trifallax]
Length = 386
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 127/173 (73%), Gaps = 2/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGD C+RIHNKP SQT+ L +LY NP + ADG ++ + E
Sbjct: 16 VNCPFYFKIGACRHGDTCTRIHNKPPLSQTLALPHLYENPPAAVAFADGLNVPQDALVEA 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ H+++FFE+VF E K+GE+EE+ V DN+GDH++GNVY+KF EE A+ A N LN R
Sbjct: 76 VN-HFEDFFEEVFGELA-KFGELEEVIVADNIGDHMIGNVYVKFVTEEQAQSAFNGLNGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GR + AE SPVTDFRE+ CRQY G+C R G+CNFMH K +S++L+R L+
Sbjct: 134 YYAGRVILAEYSPVTDFRESKCRQYNEGQCDRGGYCNFMHPKHVSKDLKRALF 186
>gi|428167701|gb|EKX36656.1| hypothetical protein GUITHDRAFT_78757 [Guillardia theta CCMP2712]
Length = 216
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFK+GACRHGDRCSR HNKP FSQT+LL ++Y P ++ + + + + D+
Sbjct: 17 VNCPFYFKVGACRHGDRCSRQHNKPLFSQTVLLSHMYQAPASAQMMSGPTAMATAADDKA 76
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q+H+D F+E+V+ E E K+G+IEE+NVC NLGDH++GNVY+K+ EE AEKA+N LN R
Sbjct: 77 SQDHFDEFYEEVYEELE-KFGKIEELNVCANLGDHMIGNVYVKYEEEEQAEKALNALNGR 135
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
++ GR + AE SPVTDFRE+ CRQYE +C G CNFMH+K S+E
Sbjct: 136 FYAGRLIMAEYSPVTDFRESRCRQYEETQCKYGGHCNFMHIKRPSKE 182
>gi|171695120|ref|XP_001912484.1| hypothetical protein [Podospora anserina S mat+]
gi|170947802|emb|CAP59965.1| unnamed protein product [Podospora anserina S mat+]
Length = 208
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 131/189 (69%), Gaps = 12/189 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAFDPKN--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGEIEE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCEMC--KYGEIEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKR 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S +K
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELERELELSTKKW 185
Query: 179 SSRRSRSRS 187
R RSRS
Sbjct: 186 LKTRPRSRS 194
>gi|330940524|ref|XP_003305953.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
gi|311316782|gb|EFQ85946.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
Length = 214
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 135/193 (69%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + ++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNAQQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
MQ H+D F+ED++ E C+ YG +EE+ VCDN DHL+GNVY++F+ EEDA+KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--YGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL--YSRR- 176
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L +R+
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDRELDMCTRKW 185
Query: 177 -KRSSRRSRSRSR 188
K R +RS SR
Sbjct: 186 LKERGRDARSMSR 198
>gi|189209401|ref|XP_001941033.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977126|gb|EDU43752.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 214
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 135/193 (69%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + ++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNAQQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
MQ H+D F+ED++ E C+ YG +EE+ VCDN DHL+GNVY++F+ EEDA+KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--YGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL--YSRR- 176
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L +R+
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDRELDMCTRKW 185
Query: 177 -KRSSRRSRSRSR 188
K R +RS SR
Sbjct: 186 LKERGRDARSMSR 198
>gi|451850761|gb|EMD64062.1| hypothetical protein COCSADRAFT_199489 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 135/193 (69%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + ++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNAQQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
MQ H+D F+ED++ E C+ YG +EE+ VCDN DHL+GNVY++F+ EEDA+KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--YGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL--YSRR- 176
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L +R+
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDRELDMCTRKW 185
Query: 177 -KRSSRRSRSRSR 188
K R +RS SR
Sbjct: 186 LKERGRDARSMSR 198
>gi|300176329|emb|CBK23640.2| unnamed protein product [Blastocystis hominis]
Length = 343
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 123/168 (73%), Gaps = 5/168 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRC+R HN+PTFSQTIL+ ++Y NP+ S + D S + +
Sbjct: 16 VNCPFYFKIGACRHGDRCTRKHNRPTFSQTILIPHMYHNPKASGVTGDPSQAQQLIQQQ- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+D F+E+V+ E YG IEE++VCDNL DH++GNVY+KF EEDAEKA+ L +R
Sbjct: 75 ----FDEFYEEVYQELSQSYGPIEELHVCDNLNDHMIGNVYVKFEDEEDAEKALKGLTHR 130
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
++ GRP+ E SPVTDFREA CRQ+E G+CTR G+CNFMHL S+ +
Sbjct: 131 YYAGRPLAPEYSPVTDFREARCRQHEEGQCTRGGYCNFMHLMTPSQPV 178
>gi|449528561|ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 122/168 (72%), Gaps = 3/168 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA--LDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E KYG++E +N+CDNL DH+VGNVY++FR EE A A+++LN R
Sbjct: 74 VQDHFEDFYEDLFEELS-KYGDLESLNICDNLADHMVGNVYVQFREEEQAANALHNLNGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISREL
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
>gi|451995958|gb|EMD88425.1| hypothetical protein COCHEDRAFT_1205672 [Cochliobolus
heterostrophus C5]
Length = 211
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 135/193 (69%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + ++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNAQQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
MQ H+D F+ED++ E C+ YG +EE+ VCDN DHL+GNVY++F+ EEDA+KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--YGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL--YSRR- 176
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L +R+
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELDRELDMCTRKW 185
Query: 177 -KRSSRRSRSRSR 188
K R +RS SR
Sbjct: 186 LKERGRDARSMSR 198
>gi|449451104|ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 122/168 (72%), Gaps = 3/168 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA--LDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E KYG++E +N+CDNL DH+VGNVY++FR EE A A+++LN R
Sbjct: 74 VQDHFEDFYEDLFEELS-KYGDLESLNICDNLADHMVGNVYVQFREEEQAANALHNLNGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISREL
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
>gi|217073019|gb|ACJ84869.1| unknown [Medicago truncatula]
Length = 228
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 123/173 (71%), Gaps = 3/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDIITPGVDPNG--QPIDPRQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E K+G +E +NVCDNL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQQHFEDFYEDIFTELS-KFGYVETLNVCDNLADHMIGNVYVLFKEEDHAAAALASLRGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K I RELRR L+
Sbjct: 133 FYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRELRRKLF 185
>gi|388521171|gb|AFK48647.1| unknown [Medicago truncatula]
Length = 327
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 134/201 (66%), Gaps = 14/201 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ------------NSAKSAD 48
VNC FYFKIGACRHGDRCSR+H KPT S T++L N+Y P
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQQPQPP 75
Query: 49 GSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++ +++QEH+D+F+ED+F E KYG+I+ +N+CDNL DH+VGNVY++++ E+
Sbjct: 76 QPPQPESLDPDKLQEHFDDFYEDLFEELS-KYGQIQSLNICDNLADHMVGNVYVQYKEED 134
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
A A+ +L R++ GRP+ SPVTDFREA CRQYE C R G+CNFMHLK ISR+L
Sbjct: 135 HAANALMNLTGRFYSGRPIIVGFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDL 194
Query: 169 RRYLYSR-RKRSSRRSRSRSR 188
R+ L+ R +R + RS SRSR
Sbjct: 195 RKRLFGRSSRRWNDRSGSRSR 215
>gi|297740057|emb|CBI30239.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 120/167 (71%), Gaps = 3/167 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTPGVDPQG--QPLDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR EE A A+ +LN R
Sbjct: 74 IQEHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 167
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISRQ 179
>gi|85112805|ref|XP_964414.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336267438|ref|XP_003348485.1| hypothetical protein SMAC_02979 [Sordaria macrospora k-hell]
gi|28926195|gb|EAA35178.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336464311|gb|EGO52551.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2508]
gi|350296398|gb|EGZ77375.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2509]
gi|380092140|emb|CCC10408.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 208
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 131/189 (69%), Gaps = 12/189 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYHNPAFDPKN--------RMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKR 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S +K
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELERELELSTKKW 185
Query: 179 SSRRSRSRS 187
R RSRS
Sbjct: 186 LKMRPRSRS 194
>gi|170580643|ref|XP_001895352.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158597751|gb|EDP35805.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 294
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 123/185 (66%), Gaps = 24/185 (12%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHGD+CSR+H PT S+ N E+
Sbjct: 23 VNCSFYLKIGACRHGDKCSRLHTXPTSSKV------------------------NFPKEK 58
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q +D FF +V++E +++YGEI+EMNVCDN G+H++GNVYIKF E +A AV LNNR
Sbjct: 59 EQREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNAXNAVKALNNR 118
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WF G+P++ ELSPV+DFR+ACCRQYE GEC+R GFCNFMHLK +S L+R L +
Sbjct: 119 WFNGKPIHCELSPVSDFRDACCRQYENGECSRGGFCNFMHLKKVSSSLKRKLEKESEGRK 178
Query: 181 RRSRS 185
RR +S
Sbjct: 179 RRKKS 183
>gi|449303843|gb|EMC99850.1| hypothetical protein BAUCODRAFT_352847 [Baudoinia compniacensis
UAMH 10762]
Length = 210
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 129/191 (67%), Gaps = 15/191 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ--NSAKSADGSHLISNVTD 58
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP A+S D S L
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTRARSMDASQL------ 69
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
Q H+D F+ED++ E +KYGE+EE+ VCDN DHL+GNVY +F+ EE A+ A LN
Sbjct: 70 ---QNHFDAFYEDIWCEM-NKYGELEELVVCDNNNDHLIGNVYARFKYEESAQAASEALN 125
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
+RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S E+ R L K
Sbjct: 126 SRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEEMDRSLELATK- 184
Query: 179 SSRRSRSRSRD 189
+ R+R RD
Sbjct: 185 --KWLRARGRD 193
>gi|389624797|ref|XP_003710052.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|351649581|gb|EHA57440.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|440473536|gb|ELQ42326.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae Y34]
gi|440483649|gb|ELQ63999.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae P131]
Length = 209
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 132/193 (68%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KPT+SQTIL+ N+Y NP K+ N+ +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPTYSQTILMPNMYQNPAYDPKN--------NMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDLWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDELNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR- 178
RW+ RP+Y ELSPVTDFREACCR CTR GFCNF+H K S EL R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCTRGGFCNFIHRKNPSEELDRELVLATKKW 185
Query: 179 ---SSRRSRSRSR 188
R RS SR
Sbjct: 186 LKMRGRDERSVSR 198
>gi|323454278|gb|EGB10148.1| hypothetical protein AURANDRAFT_14519, partial [Aureococcus
anophagefferens]
Length = 186
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 128/175 (73%), Gaps = 3/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR H+KP FSQT+++ ++Y NP + +A G S + ++
Sbjct: 15 VNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPASQIAAAGGD--PSQLDPKK 72
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D+F+E+V+ E KYGEIEE+NVC+NLGDH+VGNVY KF EE + ++ L R
Sbjct: 73 VQEEFDDFYEEVYDELA-KYGEIEELNVCENLGDHMVGNVYAKFADEEHTDASLKALFGR 131
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++ GRP+ E SPVTDFREA CRQY+ CTR G+CNFMH++ SR LRR L R
Sbjct: 132 FYAGRPLVCEFSPVTDFREARCRQYDEAVCTRGGYCNFMHIRTPSRSLRRDLEKR 186
>gi|148908155|gb|ABR17193.1| unknown [Picea sitchensis]
Length = 344
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIG CRHGDRCSR+H +P+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGVCRHGDRCSRLHTRPSISPTLLLSNMYQRPDMITPGMDPQG--HALDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++F+ED+F E KYG IE +NVCDNL DH+VGNVY++FR EE A A+ L R
Sbjct: 74 IQEHFEDFYEDLFEEL-GKYGAIESLNVCDNLADHMVGNVYVQFREEEHAAAALQALTGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
++ R + + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+ R +R
Sbjct: 133 FYAERAIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRQLFGRYRR 190
>gi|169613392|ref|XP_001800113.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
gi|111061972|gb|EAT83092.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
Length = 210
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 133/194 (68%), Gaps = 17/194 (8%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + ++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNPQQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
MQ H+D F+ED++ E C+ YG +EE+ VCDN DHL+GNVY++F+ EED++KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--YGLVEELVVCDNNNDHLIGNVYVRFKYEEDSQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------Y 173
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L +
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDRELDMCTRKW 185
Query: 174 SRRKRSSRRSRSRS 187
+ + RS SRS
Sbjct: 186 LKERGRDERSMSRS 199
>gi|169778681|ref|XP_001823805.1| splicing factor U2AF subunit [Aspergillus oryzae RIB40]
gi|238499237|ref|XP_002380853.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|83772544|dbj|BAE62672.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692606|gb|EED48952.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|391870811|gb|EIT79981.1| U2 snRNP splicing factor, small subunit [Aspergillus oryzae 3.042]
Length = 209
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 130/190 (68%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ N+Y NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+EDV+ E C KYGEIEE+ VCDN DHL+GNVY +F+ EEDA+KA + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGEIEELVVCDNNNDHLIGNVYARFKYEEDAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L R +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSNELDREL---RLST 182
Query: 180 SRRSRSRSRD 189
+ + R RD
Sbjct: 183 KKWLKERGRD 192
>gi|326528149|dbj|BAJ89126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 314
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 123/174 (70%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HNKP+ S T+LL N+Y P D N +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPGVDAQGNPINPV--K 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q +++F+ED+F E K+GE+E ++VCDNL DHL+GNVY++FR E+ A KA+ L R
Sbjct: 74 IQGDFEDFYEDIFDELS-KHGEVENLHVCDNLADHLIGNVYVQFREEDQAAKALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K I R+LR+ LY
Sbjct: 133 FYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKQIGRDLRKRLYG 186
>gi|312282783|dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 3/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG--QPLDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++FFED+F E K+GEIE +N+CDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 74 IQEHFEDFFEDLFEEL-GKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K +SRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLF 185
>gi|15217666|ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 8; Short=AtC3H8
gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small
subunit from Oryza sativa. ESTs gb|AA586295 and
gb|AA597332 come from this gene [Arabidopsis thaliana]
gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10 [Arabidopsis thaliana]
gi|12744991|gb|AAK06875.1|AF344324_1 putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|19699275|gb|AAL91249.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary factor protein [Arabidopsis thaliana]
gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|21689611|gb|AAM67427.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|332192737|gb|AEE30858.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 296
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 3/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG--QPLDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++FFED+F E K+GEIE +N+CDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 74 IQEHFEDFFEDLFEEL-GKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K +SRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLF 185
>gi|145354635|ref|XP_001421585.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581823|gb|ABO99878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 243
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HNKPT SQTILL NLY A + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPTASQTILLTNLYRPDVEVAADPRAATSGAASRAGR 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
QE ++ F EDVF E D+ GEIE +NVCDN+ DH++GNVY+KF EE A +AV L R
Sbjct: 76 GQEGFEAFVEDVFEEL-DECGEIEGVNVCDNVTDHMMGNVYVKFVEEEAAGRAVEKLRGR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 170
++ GRP+ AE SPVTDFRE+ CRQYE CTR G+CNFMHLKPI R +R+
Sbjct: 135 YYDGRPIAAEFSPVTDFRESTCRQYEENSCTRGGYCNFMHLKPIGRGMRK 184
>gi|301115075|ref|XP_002999307.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
gi|262111401|gb|EEY69453.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
Length = 340
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 131/183 (71%), Gaps = 10/183 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP--QNSAKSADGSHLISNVTD 58
VNC FYFKIGACRHGDRCSR+HNKP FSQTIL+ ++Y NP Q A++ D + L D
Sbjct: 71 VNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPIAQVIAQNGDPASLDQRQVD 130
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
E+ ++ Y+ FE++ C K+G++EE+N+CDNLGDHLVGNVY K+ EE A A L
Sbjct: 131 EDFEDFYEEVFEEL---C--KFGKVEELNICDNLGDHLVGNVYAKYEDEEHAAAAQKSLY 185
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL---YSR 175
R++ GRP+ E SPVTDFREA CRQ++ G C R G+CNFMH+K +SR ++R L ++R
Sbjct: 186 GRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVSRSMQRELERMFNR 245
Query: 176 RKR 178
KR
Sbjct: 246 GKR 248
>gi|402074537|gb|EJT70046.1| splicing factor U2AF 23 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 209
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 127/179 (70%), Gaps = 11/179 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KPT+SQTIL+ N+Y NP + K+ + + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPTYSQTILMPNMYQNPAHDPKN--------RMNESQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA ++LNN
Sbjct: 68 AQNHFDAFYEDLWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDELNN 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
RW+ RP+Y ELSPVTDFREACCR C R+GFCNF+H K S EL R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCARAGFCNFIHRKNPSEELDRELQLSTKK 184
>gi|297845720|ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
gi|297336583|gb|EFH67000.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 3/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG--QPLDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++FFED+F E K+GEIE +N+CDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 74 IQEHFEDFFEDLFEEL-GKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K +SRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLF 185
>gi|322707016|gb|EFY98595.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium
anisopliae ARSEF 23]
Length = 208
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 131/193 (67%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ EE A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEESAQKACDELNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR- 178
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRDLTLSTKKW 185
Query: 179 ---SSRRSRSRSR 188
R RS SR
Sbjct: 186 LKLRGRDERSMSR 198
>gi|68036691|gb|AAY84879.1| U2AF small subunit [Triticum aestivum]
Length = 314
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 124/175 (70%), Gaps = 5/175 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE- 59
VNC FYFKIGACRHGDRCSR+HNKP+ S T+LL N+Y P D N D
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPGVDAQ---GNPIDPV 72
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
++Q +++F+ED+F E K+GE+E ++VCDNL DHL+GNVY++FR E+ A KA+ L
Sbjct: 73 KIQGDFEDFYEDIFDELS-KHGEVENLHVCDNLADHLIGNVYVQFREEDQAAKALQALQG 131
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
R++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K I R+LR+ LY
Sbjct: 132 RFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKEIGRDLRKRLYG 186
>gi|346324452|gb|EGX94049.1| splicing factor U2AF 35 kDa subunit [Cordyceps militaris CM01]
Length = 211
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 132/190 (69%), Gaps = 12/190 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ ++ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDQKN------VNRMNPSQ 69
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ ++KA ++LN
Sbjct: 70 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDASQKACDELNG 127
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 128 RWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFCNFIHRKNPSDELDRDLTLSTKKW 187
Query: 180 SRRSRSRSRD 189
RSR RD
Sbjct: 188 ---LRSRGRD 194
>gi|116182458|ref|XP_001221078.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186154|gb|EAQ93622.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 208
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 130/189 (68%), Gaps = 12/189 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAFDPKN--------RMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCEMC--KYGEVEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKR 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K EL R L S +K
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPGPELDRELELSTKKW 185
Query: 179 SSRRSRSRS 187
R RSRS
Sbjct: 186 LKTRPRSRS 194
>gi|296415596|ref|XP_002837472.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633344|emb|CAZ81663.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 130/194 (67%), Gaps = 17/194 (8%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAFDPKN--------KMNTSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED F E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN
Sbjct: 68 LQNHFDAFYEDFFCEMC--KYGEVEEVVVCDNNNDHLIGNVYARFKYEEDAQTACDALNA 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------Y 173
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S++L R L +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSKDLERELELGMKKW 185
Query: 174 SRRKRSSRRSRSRS 187
R + RRS SRS
Sbjct: 186 LRARGRDRRSVSRS 199
>gi|255539352|ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 272
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 125/175 (71%), Gaps = 3/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG--QPIDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A+ L R
Sbjct: 74 IQEHFEDFYEDIFEEL-GKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++ GRP+ A+ SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR L+ R
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGR 187
>gi|358059521|dbj|GAA94678.1| hypothetical protein E5Q_01331 [Mixia osmundae IAM 14324]
Length = 260
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 131/193 (67%), Gaps = 17/193 (8%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNS----AKSADGSHLISNV 56
VNCSFY KIGACRHGDRCSR H KP FSQTI++ N+Y NP + AKS D
Sbjct: 31 VNCSFYLKIGACRHGDRCSRKHIKPHFSQTIVIQNMYQNPNHGMDAGAKSVD-------- 82
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
++Q+ +D FFEDV+ E K+G + EM+VCDN+GDHL+GNVY ++ E++A+ A++
Sbjct: 83 ---QLQDEFDQFFEDVYCELV-KFGHLLEMHVCDNVGDHLIGNVYARYDFEDEAQTAIDT 138
Query: 117 LNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 176
LN RWF GRP++AELSPVTDFREA CRQ ++G C R GFCNF HL+ L + L +
Sbjct: 139 LNTRWFAGRPLFAELSPVTDFREATCRQNDLGNCDRGGFCNFHHLRKPRAALVKEL-DAQ 197
Query: 177 KRSSRRSRSRSRD 189
+R RR RD
Sbjct: 198 QRVERRVNPSQRD 210
>gi|400602483|gb|EJP70085.1| splicing factor U2AF 23 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 211
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 131/190 (68%), Gaps = 12/190 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDQKNTN------RMNPSQ 69
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA ++LN
Sbjct: 70 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDAAQKACDELNG 127
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 128 RWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFCNFIHRKNPSDELDRDLTLSTKKW 187
Query: 180 SRRSRSRSRD 189
R+R RD
Sbjct: 188 ---LRARGRD 194
>gi|121712082|ref|XP_001273656.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
gi|119401808|gb|EAW12230.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
Length = 209
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 129/190 (67%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ N+Y NP KS + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKS--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L R +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSAELDREL---RLST 182
Query: 180 SRRSRSRSRD 189
+ + R RD
Sbjct: 183 KKWLKERGRD 192
>gi|67904750|ref|XP_682631.1| hypothetical protein AN9362.2 [Aspergillus nidulans FGSC A4]
gi|40747273|gb|EAA66429.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259488204|tpe|CBF87476.1| TPA: U2 auxiliary factor small subunit, putative (AFU_orthologue;
AFUA_3G02380) [Aspergillus nidulans FGSC A4]
Length = 209
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 129/190 (67%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ N+Y NP KS + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKS--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L R +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSSELDREL---RLST 182
Query: 180 SRRSRSRSRD 189
+ + R RD
Sbjct: 183 KKWLKERGRD 192
>gi|115401000|ref|XP_001216088.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
gi|114190029|gb|EAU31729.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
Length = 209
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 129/190 (67%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ N+Y NP KS + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKS--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L R +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPELDREL---RLST 182
Query: 180 SRRSRSRSRD 189
+ + R RD
Sbjct: 183 KKWLKERGRD 192
>gi|145228481|ref|XP_001388549.1| splicing factor U2AF subunit [Aspergillus niger CBS 513.88]
gi|134054638|emb|CAK43483.1| unnamed protein product [Aspergillus niger]
gi|350637745|gb|EHA26101.1| hypothetical protein ASPNIDRAFT_55496 [Aspergillus niger ATCC 1015]
Length = 209
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 129/190 (67%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ N+Y NP KS + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKS--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L R +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSNELDRDL---RLST 182
Query: 180 SRRSRSRSRD 189
+ + R RD
Sbjct: 183 KKWLKERGRD 192
>gi|281203736|gb|EFA77932.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 439
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 125/178 (70%), Gaps = 4/178 (2%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEM 61
NC FY KIGACRHGDRCSR+HNKP SQTI+L N+Y +P K G I ++EE+
Sbjct: 17 NCPFYLKIGACRHGDRCSRLHNKPIVSQTIILPNIYQSPY--LKRPAGQPPIP-ASEEEI 73
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
Q+H+D+F+ED+ E KYG+IE ++VC NLGDHL+GN+Y+K+ E+ A A+ L R+
Sbjct: 74 QKHFDDFYEDIH-EGLSKYGKIELLHVCANLGDHLIGNLYVKYSTEDAAAAAIEGLKGRF 132
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
+ GRP+ AE SPVTDF E+ CRQ+++G C R GFCNFMHL SREL L+ R S
Sbjct: 133 YDGRPIVAEFSPVTDFNESRCRQFDLGTCDRGGFCNFMHLHNPSRELSVRLFGERAAS 190
>gi|396460408|ref|XP_003834816.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
gi|312211366|emb|CBX91451.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
Length = 207
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 133/194 (68%), Gaps = 17/194 (8%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + ++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNAQQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
MQ H+D F+ED++ E C+ +G +EE+ VCDN DHL+GNVY++F+ EED++KA + LN+
Sbjct: 68 MQMHFDAFYEDIWCELCQ--FGLVEELVVCDNNNDHLIGNVYVRFKYEEDSQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------Y 173
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L +
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELERELDMCTRKW 185
Query: 174 SRRKRSSRRSRSRS 187
+ + RS SRS
Sbjct: 186 LKERGRDPRSMSRS 199
>gi|322701010|gb|EFY92761.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium acridum
CQMa 102]
Length = 208
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 131/193 (67%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDELNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR- 178
RW+ GRP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 126 RWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRDLTLSTKKW 185
Query: 179 ---SSRRSRSRSR 188
R RS SR
Sbjct: 186 LKLRGRDERSMSR 198
>gi|15723291|gb|AAL06331.1|AF409139_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 296
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 124/172 (72%), Gaps = 3/172 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG--QPLDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++FFED+F E K+GEIE +N+CDNL DH++GNVY++F+ E+ A A+ L R
Sbjct: 74 IQEHFEDFFEDLFEEL-GKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K +SRELRR L
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCYRGGYCNFMHVKLVSRELRRKL 184
>gi|164660716|ref|XP_001731481.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
gi|159105381|gb|EDP44267.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
Length = 258
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 125/184 (67%), Gaps = 8/184 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H +P S TILL N+Y NP+ S D E
Sbjct: 15 VNCSFYFKIGACRHGDRCSRRHIRPERSHTILLSNVYQNPKYLDPDCRAS-------DAE 67
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+ +D FF D F D YG + EM+VCDN+GDHL+GNVY ++ E+DA++AV+ LN R
Sbjct: 68 LQQQFDAFFSDFFKGLSD-YGTLIEMHVCDNVGDHLIGNVYARYETEDDAQRAVDGLNTR 126
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
W+ RP++AELSPV+DFREACCRQ E EC R G CNFMHL+ S EL R LY + +
Sbjct: 127 WYHQRPLFAELSPVSDFREACCRQNETNECNRGGQCNFMHLRYASPELVRELYQQLAVEN 186
Query: 181 RRSR 184
R R
Sbjct: 187 RERR 190
>gi|302915833|ref|XP_003051727.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732666|gb|EEU46014.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 209
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 129/186 (69%), Gaps = 12/186 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNQSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ EE A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEESAQKACDELNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKR 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S +K
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRDLQLSTKKW 185
Query: 179 SSRRSR 184
+R R
Sbjct: 186 LKQRGR 191
>gi|46124965|ref|XP_387036.1| hypothetical protein FG06860.1 [Gibberella zeae PH-1]
gi|408388308|gb|EKJ67994.1| hypothetical protein FPSE_11805 [Fusarium pseudograminearum CS3096]
Length = 209
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 132/194 (68%), Gaps = 17/194 (8%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ EE A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEESAQKACDELNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------Y 173
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRDLTLSTKKW 185
Query: 174 SRRKRSSRRSRSRS 187
+++ RS SRS
Sbjct: 186 LKQRGRDERSASRS 199
>gi|449455651|ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
gi|449485076|ref|XP_004157064.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
Length = 276
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 125/175 (71%), Gaps = 3/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG--QPIDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR E+ A A+ L R
Sbjct: 74 IQEHFEDFYEDIYEEL-GKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K I ++LRR L+ R
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGR 187
>gi|297791697|ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
gi|297309568|gb|EFH39992.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDPQG--QPLDPSK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E +K+GE+E +NVCDNL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQDHFEDFYEDIFEEL-NKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K ISRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFG 186
>gi|345565480|gb|EGX48429.1| hypothetical protein AOL_s00080g58 [Arthrobotrys oligospora ATCC
24927]
Length = 210
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 127/182 (69%), Gaps = 11/182 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQT+LL N+Y NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNMYQNPAFDPKN--------KMNPNQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGEIEE+ VCDN DHL+GNVY +F+ EEDA+KA ++LN
Sbjct: 68 LQTHFDGFYEDIWCEMC--KYGEIEELVVCDNNNDHLIGNVYARFKFEEDAQKACDELNQ 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K ++E+ R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCQRGGFCNFIHRKEPTKEMDRDLELSTKKW 185
Query: 180 SR 181
R
Sbjct: 186 LR 187
>gi|342890175|gb|EGU89039.1| hypothetical protein FOXB_00451 [Fusarium oxysporum Fo5176]
Length = 209
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 128/186 (68%), Gaps = 12/186 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ EE A+KA ++LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEESAQKACDELNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKR 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S +K
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRDLTLSTKKW 185
Query: 179 SSRRSR 184
R R
Sbjct: 186 LKERGR 191
>gi|15239067|ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|42573547|ref|NP_974870.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=AtC3H60
gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor, small subunit [Arabidopsis thaliana]
gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|332007485|gb|AED94868.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|332007486|gb|AED94869.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
Length = 283
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDPQG--QPLDPSK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E +K+GE+E +NVCDNL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQDHFEDFYEDIFEEL-NKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K ISRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFG 186
>gi|425770129|gb|EKV08603.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
Pd1]
gi|425771678|gb|EKV10115.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
PHI26]
Length = 209
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 129/190 (67%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ N+Y NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
MQ H+D F+EDV+ E C KYGE+EE+ +CDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 MQNHFDAFYEDVWCEMC--KYGELEELVICDNNNDHLIGNVYGRFKYEEDAQAACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L R +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSSELDREL---RLST 182
Query: 180 SRRSRSRSRD 189
+ + R RD
Sbjct: 183 KKWLKERGRD 192
>gi|367052051|ref|XP_003656404.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
gi|347003669|gb|AEO70068.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
Length = 231
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 130/189 (68%), Gaps = 12/189 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 39 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAFDPKN--------RMNASQ 90
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 91 LQNHFDAFYEDIWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 148
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKR 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L + +K
Sbjct: 149 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPELERELQLATKKW 208
Query: 179 SSRRSRSRS 187
+ RSRS
Sbjct: 209 LKMKPRSRS 217
>gi|388580357|gb|EIM20672.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 216
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 132/193 (68%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHG+RCSR H KP FSQTI++ N+Y NP H N D+
Sbjct: 17 VNCSFYYKIGACRHGERCSRKHIKPQFSQTIVMPNVYQNPM---------HRPDNKLDQR 67
Query: 61 -MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
+Q +D FFED+F+E C K+G + EM+VCDN+GDHL+GNVY ++ E +A+ AV+ LN
Sbjct: 68 GIQVDFDMFFEDLFMELC--KFGNLLEMHVCDNVGDHLIGNVYARYEWETEAQAAVDKLN 125
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY--SRR 176
RW+ GRP++ ELSPVTDFREACCRQ + G+C R GFCNFMHLK +R L R L R
Sbjct: 126 ERWYAGRPLHCELSPVTDFREACCRQNDTGDCNRGGFCNFMHLKRPTRSLIRDLQHSQRL 185
Query: 177 KRSSRRSRSRSRD 189
+R R RD
Sbjct: 186 ERKLRAHEQEDRD 198
>gi|70986128|ref|XP_748561.1| U2 auxiliary factor small subunit [Aspergillus fumigatus Af293]
gi|66846190|gb|EAL86523.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
Af293]
gi|159128305|gb|EDP53420.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
A1163]
Length = 209
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 129/190 (67%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ N+Y NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L R +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPELDREL---RLST 182
Query: 180 SRRSRSRSRD 189
+ + R RD
Sbjct: 183 KKWLKERGRD 192
>gi|119474039|ref|XP_001258895.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
gi|119407048|gb|EAW16998.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
Length = 209
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 129/190 (67%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ N+Y NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L R +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPELDREL---RLST 182
Query: 180 SRRSRSRSRD 189
+ + R RD
Sbjct: 183 KKWLKERGRD 192
>gi|255941442|ref|XP_002561490.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586113|emb|CAP93860.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 129/190 (67%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ N+Y NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
MQ H+D F+EDV+ E C KYGE+EE+ +CDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 MQNHFDAFYEDVWCEMC--KYGELEELVICDNNNDHLIGNVYGRFKYEEDAQAACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L R +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPELDREL---RLST 182
Query: 180 SRRSRSRSRD 189
+ + R RD
Sbjct: 183 KKWLKERGRD 192
>gi|380493273|emb|CCF34000.1| hypothetical protein CH063_06082 [Colletotrichum higginsianum]
Length = 209
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 130/193 (67%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR- 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S +L R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDLDRDLTLSTKKW 185
Query: 179 ---SSRRSRSRSR 188
R RS SR
Sbjct: 186 LKDRGRDERSPSR 198
>gi|429851228|gb|ELA26437.1| u2 auxiliary factor small [Colletotrichum gloeosporioides Nara gc5]
Length = 208
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 130/193 (67%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR- 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S +L R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDLDRDLTLSTKKW 185
Query: 179 ---SSRRSRSRSR 188
R RS SR
Sbjct: 186 LKDRGRDERSPSR 198
>gi|310790801|gb|EFQ26334.1| hypothetical protein GLRG_01478 [Glomerella graminicola M1.001]
Length = 209
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 130/193 (67%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR- 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S +L R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDLDRDLTLSTKKW 185
Query: 179 ---SSRRSRSRSR 188
R RS SR
Sbjct: 186 LKERGRDERSPSR 198
>gi|224132068|ref|XP_002328177.1| predicted protein [Populus trichocarpa]
gi|222837692|gb|EEE76057.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 116/166 (69%), Gaps = 3/166 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITPGVDAQG--NPIDPRR 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H++ F+ED+F E KYGEIE +NVCDNL DH+VGNVY++FR EE A A+ +L R
Sbjct: 74 IQQHFEEFYEDLFEELR-KYGEIESLNVCDNLADHMVGNVYVQFREEEHASNALKNLTGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR 166
++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK I R
Sbjct: 133 FYAGRPIIVDFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGR 178
>gi|302414438|ref|XP_003005051.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261356120|gb|EEY18548.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|346979310|gb|EGY22762.1| splicing factor U2AF 23 kDa subunit [Verticillium dahliae VdLs.17]
Length = 210
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 130/193 (67%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C+ YGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDIWCELCQ--YGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR- 178
RW+ RP+YAELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 126 RWYAARPIYAELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDELDRELVLSTKKW 185
Query: 179 ---SSRRSRSRSR 188
R RS SR
Sbjct: 186 LKDRGRDERSPSR 198
>gi|294461365|gb|ADE76244.1| unknown [Picea sitchensis]
Length = 290
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+P+ S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITPGLDPQG--QAMDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++FFED+F E K+GEIE +N+CDNL DH+VGNVY++FR EE A A+ + R
Sbjct: 74 IQEHFEDFFEDIFEELS-KFGEIENLNICDNLADHMVGNVYVQFREEEQAAAALKAMQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
++ GRP+ + SPVTDFREA CRQ+E C R G+CNFMH+K I+++L
Sbjct: 133 FYSGRPIIVDFSPVTDFREATCRQFEENNCNRGGYCNFMHVKKINKDL 180
>gi|407919834|gb|EKG13056.1| Inositol monophosphatase [Macrophomina phaseolina MS6]
Length = 209
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 122/173 (70%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA +DLN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDDLNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKVPSPELEREL 178
>gi|452983858|gb|EME83616.1| hypothetical protein MYCFIDRAFT_85447 [Pseudocercospora fijiensis
CIRAD86]
Length = 209
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 128/190 (67%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP KS + ++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDNKS--------RMNPQQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C K+GEIEE+ VCDN DHL+GNVY +F+ EE A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KFGEIEEVVVCDNNNDHLIGNVYARFKYEESAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELERELELATKKW 185
Query: 180 SRRSRSRSRD 189
R R RD
Sbjct: 186 ---LRERGRD 192
>gi|296810970|ref|XP_002845823.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843211|gb|EEQ32873.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 209
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 123/173 (71%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NPQ +K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPQYDSKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGEIEE+ VC+N DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEELDREL 178
>gi|124803997|ref|XP_001347871.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
gi|23496123|gb|AAN35784.1|AE014838_62 U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
Length = 294
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGD+CSR H KP +QT+++ ++Y NP + A+G + V D+
Sbjct: 16 VNCPFFWKIGACRHGDQCSRSHYKPNCAQTLVIRHMYDNPPIAVAIAEGQMVEDEVLDK- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ F+E+VF E KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKAVN+LN R
Sbjct: 75 AADHFEEFYEEVFDELM-KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVNELNGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++ G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R L+ R
Sbjct: 134 FYAGKPLQIEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVPRTVKRKLFRR 188
>gi|358391429|gb|EHK40833.1| hypothetical protein TRIATDRAFT_301601 [Trichoderma atroviride IMI
206040]
Length = 209
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 128/190 (67%), Gaps = 14/190 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+ A + LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQAAADTLNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRELTLSTK-- 183
Query: 180 SRRSRSRSRD 189
+ +SR RD
Sbjct: 184 -KWLKSRGRD 192
>gi|224061819|ref|XP_002300614.1| predicted protein [Populus trichocarpa]
gi|222842340|gb|EEE79887.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 124/175 (70%), Gaps = 3/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG--QPLDPHK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH++ F+ED+F E +K+GEIE +NVCDNL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQEHFEEFYEDIFEEL-NKFGEIESLNVCDNLADHMIGNVYVLFKEEDQAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++ GRP+ A+ SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR L+ R
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGR 187
>gi|315051764|ref|XP_003175256.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|327296385|ref|XP_003232887.1| splicing factor U2AF subunit [Trichophyton rubrum CBS 118892]
gi|311340571|gb|EFQ99773.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|326465198|gb|EGD90651.1| splicing factor U2AF 35 kDa subunit [Trichophyton rubrum CBS
118892]
gi|326473197|gb|EGD97206.1| splicing factor U2AF 35 kDa subunit [Trichophyton tonsurans CBS
112818]
Length = 209
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 122/173 (70%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NPQ K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPQYDPKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGEIEE+ VC+N DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEELDREL 178
>gi|357154143|ref|XP_003576685.1| PREDICTED: splicing factor U2af small subunit A-like [Brachypodium
distachyon]
Length = 295
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 123/175 (70%), Gaps = 5/175 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE- 59
VNC FYFKIGACRHGDRCSR+HNKP+ S T+LL N+Y P D N D
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPGVDAQ---GNPIDPV 72
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
++Q +++F+ED+F E K+G +E ++VCDNL DHL+GNVY++FR E+ A +A+ L
Sbjct: 73 KIQGDFEDFYEDIFDELS-KHGVVESLHVCDNLADHLIGNVYVQFREEDQAARALQALQG 131
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
R++ GRP+ AE SPVTDFREA CRQ+E C R G+CNFMH+K I R+LR+ LY
Sbjct: 132 RFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKEIGRDLRKRLYG 186
>gi|453086343|gb|EMF14385.1| splicing factor U2AF 35 kDa subunit [Mycosphaerella populorum
SO2202]
Length = 209
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 129/194 (66%), Gaps = 17/194 (8%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP KS + ++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDNKS--------RMNPQQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGEIEE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------Y 173
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K EL R L +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPGPELERELELATKKW 185
Query: 174 SRRKRSSRRSRSRS 187
R + RS +RS
Sbjct: 186 LRERGRDERSVTRS 199
>gi|212526104|ref|XP_002143209.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|242780019|ref|XP_002479507.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
gi|210072607|gb|EEA26694.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|218719654|gb|EED19073.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
Length = 209
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 122/173 (70%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGEIEE+ VCDN DHL+GNVY +F+ E+ A+ A + LN+
Sbjct: 68 IQNHFDAFYEDIWCEMC--KYGEIEEIVVCDNNNDHLIGNVYARFKYEDSAQAACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RPVY ELSPVTDFREACCR C R GFCNF+H K + EL+R L
Sbjct: 126 RWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPTPELQREL 178
>gi|156086588|ref|XP_001610703.1| U2 splicing factor subunit [Babesia bovis T2Bo]
gi|154797956|gb|EDO07135.1| U2 splicing factor subunit, putative [Babesia bovis]
Length = 251
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 138/194 (71%), Gaps = 9/194 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FY+KIGACRHGD+CSR H KP+ +QT+++ ++Y NP + A+G +IS+ ++
Sbjct: 16 VNCPFYWKIGACRHGDQCSRAHYKPSAAQTLVIRHMYQNPPVAIAIAEG-QMISDELLDK 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ F+E+VF+E KYGEIE+M VCDN+GDH++GNVY+K+R E A A++ L+ R
Sbjct: 75 AADHFEEFYEEVFLELM-KYGEIEDMVVCDNIGDHIIGNVYVKYRDENSAAHAISMLSGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-------Y 173
++GG+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R +RR L +
Sbjct: 134 FYGGKPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVPRSVRRKLDERMYAEF 193
Query: 174 SRRKRSSRRSRSRS 187
K+ + RS RS
Sbjct: 194 PEYKKRALRSSERS 207
>gi|452845011|gb|EME46945.1| hypothetical protein DOTSEDRAFT_70773 [Dothistroma septosporum
NZE10]
Length = 209
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 121/173 (69%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQT+LL NLY NP KS + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNLYQNPAYDNKS--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGEIEE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDREL 178
>gi|82541542|ref|XP_725006.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479849|gb|EAA16571.1| similar to RIKEN cDNA 2010107D16 gene [Plasmodium yoelii yoelii]
Length = 309
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 136/191 (71%), Gaps = 4/191 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGD+CSR H KP +QT+++ ++Y NP + A+G + V D+
Sbjct: 16 VNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVAIAEGQMVDDEVLDQ- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ F+E+VF E KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKAV +LN R
Sbjct: 75 AADHFEEFYEEVFDELM-KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 178
++ G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R L+ R +K
Sbjct: 134 FYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRTVKRRLHKRMYKKF 193
Query: 179 SSRRSRSRSRD 189
+ +SRD
Sbjct: 194 PMYKKNKKSRD 204
>gi|440635086|gb|ELR05005.1| splicing factor U2AF 35 kDa subunit [Geomyces destructans 20631-21]
Length = 209
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 128/186 (68%), Gaps = 12/186 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQT+LL NLY NP K+ + ++
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNLYQNPAYDPKA--------KLDAKQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGE+EE+ +CDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQMHFDAFYEDFWCEMC--KYGELEEVVICDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKR 178
RW+ RP+Y ELSPVTDFREACCR C R+GFCNF+H K S EL R L S RK
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRAGFCNFIHRKNPSPELERELDMSTRKW 185
Query: 179 SSRRSR 184
R R
Sbjct: 186 LRERGR 191
>gi|378729857|gb|EHY56316.1| hypothetical protein HMPREF1120_04400 [Exophiala dermatitidis
NIH/UT8656]
Length = 209
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 121/173 (69%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELEREL 178
>gi|340519983|gb|EGR50220.1| predicted protein [Trichoderma reesei QM6a]
Length = 209
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 127/193 (65%), Gaps = 15/193 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A A LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSASAACEALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR- 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRELTLSTKKW 185
Query: 179 ---SSRRSRSRSR 188
R RS+SR
Sbjct: 186 LKMRGRDERSQSR 198
>gi|320590311|gb|EFX02754.1| u2 auxiliary factor small [Grosmannia clavigera kw1407]
Length = 208
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 117/169 (69%), Gaps = 12/169 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ NLY NP N + + S L
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPANVSNGMNASQL-------- 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
Q H+D F+ED++ E C KYGE+EE+ VCDN DHLVGNVY +F+ EE A A + LN
Sbjct: 68 -QNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLVGNVYARFKYEESAASACDALNG 124
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
RW+ RP+Y ELSPVTDFREACCR C R G+CNF+H K S EL
Sbjct: 125 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGYCNFIHRKNPSEEL 173
>gi|237839493|ref|XP_002369044.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|211966708|gb|EEB01904.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|221483313|gb|EEE21632.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii GT1]
gi|221507801|gb|EEE33388.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii VEG]
Length = 254
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 127/175 (72%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FY+KIGACRHGD+CSR H KPT S TI+L ++Y NP + A+G ++ + D+
Sbjct: 16 VNCPFYWKIGACRHGDQCSRSHYKPTSSPTIVLRHMYPNPPVAVAIAEGQNVSDELLDQ- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ FF +VF E KYGE+E+M VCDN+GDH++GNVY+K+ EE A KA+ L R
Sbjct: 75 AADHFEAFFSEVFEELA-KYGEVEDMVVCDNIGDHIIGNVYVKYTDEEAANKALAALQGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++ G+ ++AE +PVTDFREA CRQ+ G+C R G+CNFMHLK + R L+R L+ +
Sbjct: 134 FYSGKQIHAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVPRSLKRKLFKK 188
>gi|225457677|ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
vinifera]
gi|359491881|ref|XP_003634337.1| PREDICTED: splicing factor U2af small subunit B isoform 2 [Vitis
vinifera]
Length = 272
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG--QPIDPRK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++F+ EE A A+ L R
Sbjct: 74 IQEHFEDFYEDIFEEL-GKFGEIESLNVCDNLADHMIGNVYVQFKEEEQAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
++ GRP+ A+ SPVTDFREA CRQ+E C R G+CNFMH+K I R+LRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLF 185
>gi|68070599|ref|XP_677211.1| U2 snRNP auxiliary factor, small subunit [Plasmodium berghei strain
ANKA]
gi|56497237|emb|CAI00252.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
berghei]
Length = 304
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 129/175 (73%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGD+CSR H KP +QT+++ ++Y NP + A+G + V D+
Sbjct: 16 VNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVAIAEGQMVDDEVLDQ- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ F+E+VF E KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKA+ +LN R
Sbjct: 75 AADHFEEFYEEVFDELM-KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAIKELNGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++ G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R L+ R
Sbjct: 134 FYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRTVKRRLHKR 188
>gi|154279620|ref|XP_001540623.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
gi|150412566|gb|EDN07953.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
Length = 270
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 126/186 (67%), Gaps = 12/186 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + +
Sbjct: 77 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTKN--------KMNPSQ 128
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A++A + LN+
Sbjct: 129 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDALNS 186
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-YSRRKR 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L S +K
Sbjct: 187 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELERELELSTKKW 246
Query: 179 SSRRSR 184
R R
Sbjct: 247 LKMRGR 252
>gi|261196914|ref|XP_002624860.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|225562652|gb|EEH10931.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
gi|239596105|gb|EEQ78686.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609690|gb|EEQ86677.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ER-3]
gi|240279459|gb|EER42964.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H143]
gi|325092588|gb|EGC45898.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H88]
gi|327355349|gb|EGE84206.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 209
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 121/173 (69%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A++A + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELEREL 178
>gi|119188829|ref|XP_001245021.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392867930|gb|EAS33646.2| splicing factor U2AF 35 kDa subunit [Coccidioides immitis RS]
Length = 209
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 121/173 (69%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL N+Y NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNMYQNPAFDPKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELERDL 178
>gi|154301115|ref|XP_001550971.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|156056997|ref|XP_001594422.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154702015|gb|EDO01754.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
gi|347840346|emb|CCD54918.1| similar to splicing factor U2af 38 kDa subunit [Botryotinia
fuckeliana]
Length = 210
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 121/173 (69%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C K+GEIEE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KFGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDELDREL 178
>gi|406862517|gb|EKD15567.1| splicing factor U2AF 35 kDa subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 209
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 129/194 (66%), Gaps = 17/194 (8%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------KMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C K+GEIEE+ VCDN DHL+GNVY +F+ E+ A+KA + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KFGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKASDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL------Y 173
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R + +
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELDREIELSTKKW 185
Query: 174 SRRKRSSRRSRSRS 187
R + RS SRS
Sbjct: 186 LRLRGRDERSASRS 199
>gi|357017169|gb|AET50613.1| hypothetical protein [Eimeria tenella]
Length = 252
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 130/178 (73%), Gaps = 8/178 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE- 59
VNC FY+KIGACRHGD+CSR H KP+ S TI+L ++Y NP + A+G NV+DE
Sbjct: 16 VNCPFYWKIGACRHGDQCSRSHYKPSSSPTIVLRHMYPNPPVAIAIAEGQ----NVSDEL 71
Query: 60 --EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
E +H++ FF +VF E KYGE+E+M VCDN+GDH++GNVY+K+ ++ A+KA++ L
Sbjct: 72 LDEAADHFEAFFSEVFEELY-KYGEVEDMVVCDNIGDHIIGNVYVKYSDDDAAKKALSAL 130
Query: 118 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
R+ G+P+ AE +PVTDFREA CRQ+ G+C R G+CNFMHLK + R L+R L+++
Sbjct: 131 QGRYDAGKPIQAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVPRSLKRKLFNK 188
>gi|452820320|gb|EME27364.1| splicing factor U2AF 35 kDa subunit [Galdieria sulphuraria]
Length = 285
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 130/174 (74%), Gaps = 2/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYIN-PQNSAKSADGSHLISNVTDE 59
VNC FYFKIGACRHG+RCSR+HNKP FSQTILL N+Y++ Q +A + +++E
Sbjct: 16 VNCPFYFKIGACRHGERCSRLHNKPVFSQTILLKNMYLSVDQIAAAAIAVGAKPPEMSEE 75
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+++ H+D+F+EDV+ E KYGEIEEM+VC+N+ +HL GNVYIKF+ E+ A++A+ +N
Sbjct: 76 DIKYHFDDFYEDVYDEL-SKYGEIEEMHVCENMSEHLTGNVYIKFKDEDAAQRALQAVNG 134
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
R++ GR V+AE SPVTDFREA CR YE C R +CNFMH+K IS +L L+
Sbjct: 135 RYYAGRMVHAEFSPVTDFREARCRPYERQLCDRGDYCNFMHIKRISDDLFNGLF 188
>gi|302756127|ref|XP_002961487.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
gi|300170146|gb|EFJ36747.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
Length = 200
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HNKPT S T+LL N+Y P + D L D++
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPTISPTLLLSNMYQRPDMATPGMD---LNGQTMDQK 72
Query: 61 -MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+QEH+++F+ED+F E KYGEIE +NVCDNL DH+VGNVY++FR EE+A A+ L+
Sbjct: 73 KIQEHFEDFYEDMFEELS-KYGEIESLNVCDNLADHMVGNVYVQFREEEEAAAALKALSG 131
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPI--SRELRRYLYSRRK 177
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHL+ I SR L +
Sbjct: 132 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLRRIGSSRRPSATLSTSSG 191
Query: 178 RSSRRSRSR 186
SRR R
Sbjct: 192 SCSRRGWRR 200
>gi|398408734|ref|XP_003855832.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
gi|339475717|gb|EGP90808.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
Length = 209
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 126/182 (69%), Gaps = 11/182 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP KS +T +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDNKS--------RMTPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F++D + E C K+GE+EE+ VCDN DHL+GNVY +F+ E+ A+KA ++LN+
Sbjct: 68 LQNHFDAFYDDFWCEMC--KFGELEEVVVCDNNNDHLIGNVYARFKYEDAAQKACDELNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S +L + L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPDLEKELELATKKH 185
Query: 180 SR 181
R
Sbjct: 186 LR 187
>gi|295661444|ref|XP_002791277.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280839|gb|EEH36405.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226292865|gb|EEH48285.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 209
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 121/173 (69%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTKN--------KMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A++A + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL + L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELEKEL 178
>gi|15723293|gb|AAL06332.1|AF409140_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 283
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 123/174 (70%), Gaps = 3/174 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDPQG--QPLDPSK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+H+++F+ED+F E +K+GE+E +NVC NL DH++GNVY+ F+ E+ A A+ L R
Sbjct: 74 IQDHFEDFYEDIFEEL-NKFGEVESLNVCVNLADHMIGNVYVLFKEEDHAAAALQALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
++ GRP+ A+ SPVTDFREA CRQYE C R G CNFMH+K ISRELRR L+
Sbjct: 133 FYSGRPIIADFSPVTDFREATCRQYEENSCNRGGCCNFMHVKQISRELRRKLFG 186
>gi|358377722|gb|EHK15405.1| hypothetical protein TRIVIDRAFT_74630 [Trichoderma virens Gv29-8]
Length = 209
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 121/179 (67%), Gaps = 11/179 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR H KP++SQTIL+ NLY NP K+ + +
Sbjct: 16 VNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------RMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED++ E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A A LN+
Sbjct: 68 LQNHFDAFYEDIWCELC--KYGELEELVVCDNNNDHLIGNVYARFKYEDSASAACEALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L K+
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDELDRELTLSTKK 184
>gi|308812528|ref|XP_003083571.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
gi|116055452|emb|CAL58120.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
Length = 246
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD--GSHLISNVTD 58
VNC FYFKIGACRHGDRCSR+HNKP+ SQT+LL N+Y + + + D + + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPSASQTVLLTNMY-RAEGAGGTVDPRDAASGKSASA 74
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
Q H++ F ED+F E D+ GEIE +NVCDN DH+ GNVY+KF E+ A +A+ L
Sbjct: 75 SAGQGHFEAFVEDLFEEL-DECGEIEGVNVCDNATDHMAGNVYVKFVDEDGARRALEKLQ 133
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
R++ GRP+ E SPVTDF+E+ CRQYE CTR G+CNFMHL+PI R +R+ L R
Sbjct: 134 GRYYDGRPILVEYSPVTDFKESTCRQYEENSCTRGGYCNFMHLRPIGRSMRKQLRRRATG 193
Query: 179 SSRRSRSRSR 188
SS S R
Sbjct: 194 SSTMDASTRR 203
>gi|303323541|ref|XP_003071762.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240111464|gb|EER29617.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035093|gb|EFW17035.1| splicing factor U2AF 35 kDa subunit [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 120/173 (69%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL N+Y NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNMYQNPAFDPKN--------KMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A+ A + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQNACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELERDL 178
>gi|406696973|gb|EKD00243.1| splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 161
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 117/155 (75%), Gaps = 10/155 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHGDRCSR H KP FSQT+LL N+Y NP ++ + +T +E
Sbjct: 16 VNCSFYLKIGACRHGDRCSRKHIKPQFSQTVLLPNVYNNPSHTPEGL-------TMTKDE 68
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q +D F+ED F+E C KYG ++EM+VCDN+GDHL GNVY+++ E +A KAV LNN
Sbjct: 69 LQADFDRFYEDFFIELC--KYGNVQEMHVCDNIGDHLEGNVYVRYEWEAEANKAVEQLNN 126
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSG 154
RW+G RP++AELSPV+DFREACCRQ E+GEC R G
Sbjct: 127 RWYGMRPLHAELSPVSDFREACCRQNELGECKREG 161
>gi|225680499|gb|EEH18783.1| splicing factor U2af 38 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 209
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 120/173 (69%), Gaps = 11/173 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTILL NLY NP K+ + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTKN--------KMNASQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A++ + LN+
Sbjct: 68 LQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQGCDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL + L
Sbjct: 126 RWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELEKEL 178
>gi|297597337|ref|NP_001043811.2| Os01g0667800 [Oryza sativa Japonica Group]
gi|255673535|dbj|BAF05725.2| Os01g0667800 [Oryza sativa Japonica Group]
Length = 207
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 121/185 (65%), Gaps = 6/185 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCS +HN+PT S T++ N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSCLHNRPTISPTVVFANMYQRPDMITPGVDAQG--QPIDPRQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEEL-SKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR---ELRRYLYSRRK 177
++ GRP+ + SPVTDFREA CRQYE C R G+CNF H+K I + L+ +K
Sbjct: 133 FYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFTHVKQIGTWEGSEEKTLWPLQK 192
Query: 178 RSSRR 182
++R+
Sbjct: 193 ATTRQ 197
>gi|50555327|ref|XP_505072.1| YALI0F06292p [Yarrowia lipolytica]
gi|49650942|emb|CAG77879.1| YALI0F06292p [Yarrowia lipolytica CLIB122]
Length = 203
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 127/189 (67%), Gaps = 8/189 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSA---DGSHLISNVT 57
VNCSFY+KIGACRHG++CSR H KPT+S T+L NLY NP N DGS + T
Sbjct: 16 VNCSFYYKIGACRHGEKCSRKHVKPTYSNTVLCSNLYQNPANGESDPLNEDGSKM----T 71
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
++ +H+ F+ED+++E K G +EEM VC+N DHL GN Y++FR +EDA++A +
Sbjct: 72 KADLDKHFALFYEDIYMEAA-KLGRLEEMIVCENGNDHLTGNTYLRFRNQEDAQRACDLF 130
Query: 118 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
N RW+ GRPV+ ELSPV DF E+CCRQ++ EC+R CNFMH K R+L + L + ++
Sbjct: 131 NTRWYAGRPVWCELSPVNDFTESCCRQHDTNECSRGNMCNFMHAKRPPRQLAKDLDASQR 190
Query: 178 RSSRRSRSR 186
+ R R R
Sbjct: 191 KFYNRQRDR 199
>gi|328875135|gb|EGG23500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 447
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 120/184 (65%), Gaps = 14/184 (7%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP-----QNSAKSADGSHLISNV 56
NC FY KIGACRHGDRCSR+HNKP S T++L NLY +P QN
Sbjct: 35 NCPFYLKIGACRHGDRCSRLHNKPIVSHTVILPNLYQSPYLRRGQNQPPV--------QA 86
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
T EE+Q+H+D F+ED+ E KYG +E M+VC NLGDHL+GNVY+K+ EE A AV
Sbjct: 87 TQEEIQKHFDEFYEDLH-EGLSKYGRVELMHVCANLGDHLIGNVYVKYDTEEAAGAAVEG 145
Query: 117 LNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRR 176
L R++ GRP+ AE SPVTDF E+ CRQ++MG C R G+CNFMHL S+ L L+ R
Sbjct: 146 LRGRFYDGRPIVAEFSPVTDFNESRCRQFDMGTCDRGGYCNFMHLHLPSKPLSIKLFGDR 205
Query: 177 KRSS 180
+ S
Sbjct: 206 RSPS 209
>gi|219126548|ref|XP_002183517.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405273|gb|EEC45217.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 251
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 120/172 (69%), Gaps = 1/172 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRH DRCSR+H+KP FSQT+L+ +LY +P A+ ++V +
Sbjct: 16 VNCPFYFKIGACRHSDRCSRLHHKPAFSQTLLVQHLYRHPTRQAELRAAHGGDAHVDPRQ 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
QE + FFED++VE K+G IE M+V DNLGDH++G+VY+KF EE A A+ +N R
Sbjct: 76 AQEDFFAFFEDLYVEFS-KFGRIEGMHVVDNLGDHMIGHVYVKFADEEQASDALQVMNGR 134
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
++ GRP+ E SPVTDFREA CR Y+ +C R G+CNF+H KP+ R L + L
Sbjct: 135 YYDGRPMIIEFSPVTDFREARCRDYDEDQCARQGYCNFLHSKPVPRALLQSL 186
>gi|422294712|gb|EKU22012.1| splicing factor U2AF 35 kDa subunit, partial [Nannochloropsis
gaditana CCMP526]
Length = 313
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 128/178 (71%), Gaps = 7/178 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADG------SHLIS 54
VNC FYFKIGACRHG+RCSR HNKP FSQT+LL ++Y NP ++ +A +
Sbjct: 81 VNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLKHMYKNPASALFTAPARGERAAPQGAN 140
Query: 55 NVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 114
+ T++ + +++FFE+V+ E K+GE+E M+VCDNLG+H++GNVY K+ EE+A++A
Sbjct: 141 DATNQAGLDDFEDFFEEVYEELA-KFGEVEGMHVCDNLGEHMIGNVYAKYADEEEADEAR 199
Query: 115 NDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
LN R++ GR + E SPVTDFREA CRQY+ G+CT +CNF+H+K ISR LRR L
Sbjct: 200 QALNGRFYAGRVLEVEFSPVTDFREARCRQYDEGQCTYGPYCNFLHVKTISRALRRDL 257
>gi|161899399|ref|XP_001712926.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
gi|75756420|gb|ABA27314.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
Length = 193
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 123/178 (69%), Gaps = 4/178 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSA-DGSHLISNVTDE 59
VNC FYFKIGACRHG +CSR+HNKPT SQTIL +NLY NP A DG L
Sbjct: 16 VNCPFYFKIGACRHGSKCSRLHNKPTSSQTILFVNLYQNPALKAPVGKDG--LPKPKNPY 73
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+ Q+ ++ F+ED+F E +G+I+ + VCDNL DHL+GNVY+KF +++ A KA+ ++
Sbjct: 74 KSQKQFEFFYEDLFQEMSF-FGDIDNIYVCDNLSDHLIGNVYVKFLKDKSAMKALKSVSG 132
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
R++ R + AE SPVTDFRE+ CRQYE C R G+CNFMHLKP+ R R ++S +K
Sbjct: 133 RFYDKRLIVAETSPVTDFRESTCRQYEDNTCNRGGYCNFMHLKPLKRSFRNKIFSLKK 190
>gi|302776046|ref|XP_002971319.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
gi|300161301|gb|EFJ27917.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
Length = 275
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/161 (58%), Positives = 118/161 (73%), Gaps = 5/161 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HNKPT S T+LL N+Y P + D L D++
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNKPTISPTLLLSNMYQRPDMATPGMD---LNGQTMDQK 72
Query: 61 -MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+QEH+++F+ED+F E KYGEIE +NVCDNL DH+VGNVY++FR EE+A A+ L+
Sbjct: 73 KIQEHFEDFYEDMFEEL-SKYGEIESLNVCDNLADHMVGNVYVQFREEEEAAAALKALSG 131
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 160
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMH
Sbjct: 132 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMH 172
>gi|428672035|gb|EKX72950.1| U2 snrnp auxiliary factor, small subunit, putative [Babesia equi]
Length = 243
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 141/196 (71%), Gaps = 11/196 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FY+KIGACRHGD+CSR H KP+ SQT+++ ++Y NP + A+G +IS+ ++
Sbjct: 16 VNCPFYWKIGACRHGDQCSRAHYKPSASQTLVIRHMYQNPPVAIAIAEG-QMISDELLDK 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ FFE+VF+E KYGEIE+M VCDN+GDH++GNVY+K+ E A +AV L+ R
Sbjct: 75 AADHFEEFFEEVFLELM-KYGEIEDMVVCDNIGDHIIGNVYVKYSDESAASRAVTSLSGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR----- 175
++GGRP+ AE +PVTDFREA CRQ+ G+C R G+CNFMH+K I R LRR L R
Sbjct: 134 YYGGRPIQAEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHIPRSLRRKLMKRMYEEY 193
Query: 176 ---RKRSSRRS-RSRS 187
+KRS R S R+RS
Sbjct: 194 PEYKKRSPRSSYRNRS 209
>gi|226469292|emb|CAX70125.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 198
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/119 (84%), Positives = 110/119 (92%)
Query: 55 NVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 114
N+T+ + Q+ +D FFE+VFVECE+KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV
Sbjct: 45 NLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 104
Query: 115 NDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
DLN RWFGGRPV+AELSPVTDFREACCRQYE+GECTR GFCNFMHLKPISREL R LY
Sbjct: 105 QDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 163
>gi|302815930|ref|XP_002989645.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
gi|300142616|gb|EFJ09315.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
Length = 217
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 121/179 (67%), Gaps = 4/179 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FY K+GACRHGDRCSR H KP S T+LL N+Y +P+ + A + + ++ EE
Sbjct: 15 VNCPFYLKMGACRHGDRCSRAHVKPKQSCTLLLNNMYQSPEITPGQA---YRNTAISKEE 71
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+ D F+EDVF E K+G++E + +C+N G+HL GNVY++FR EE A A+ LN R
Sbjct: 72 LQKDLDAFYEDVFKEV-SKHGKVEALKICNNFGNHLAGNVYVQFRHEEHAVAAMAALNGR 130
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
++ GRP+ AE SPVTDFREA CRQ E G C+R G CNF+HL SR L R L R S
Sbjct: 131 FYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCCNFLHLYHPSRALMRELMGDRSSS 189
>gi|294936347|ref|XP_002781727.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239892649|gb|EER13522.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 278
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 115/164 (70%), Gaps = 2/164 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIG CRHGD+CSR HN+P SQT+LL +Y NP + A+G + D
Sbjct: 16 VNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIALAEGQDIPDEQADA- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
QEH++ F+E+VF+E + YGEIE++ V DN+GDH++GNVY+K+ +EE AE + L R
Sbjct: 75 AQEHFEAFYEEVFLELAN-YGEIEDLAVVDNIGDHMIGNVYVKYVKEESAEMCIQKLTGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPI 164
++ GR + E SPVTDF EA CRQ++ +C+R GFCNF+H K +
Sbjct: 134 FYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 177
>gi|403223158|dbj|BAM41289.1| U2 snRNP auxiliary factor [Theileria orientalis strain Shintoku]
Length = 242
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 140/198 (70%), Gaps = 13/198 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGD+CSR H KP+ +QT+++ ++Y NP + A+G +IS+ ++
Sbjct: 16 VNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPVAIAIAEG-QMISDELLDK 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ FFE+VF+E KYGEIE+M VCDN+GDH++GNVYIK+ E A +AV L+ R
Sbjct: 75 AADHFEEFFEEVFLE-LMKYGEIEDMVVCDNIGDHIIGNVYIKYTDESAACRAVTSLSGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-------- 172
++GGRP+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R LRR L
Sbjct: 134 YYGGRPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVPRSLRRKLMKRMYEEF 193
Query: 173 --YSRR-KRSSRRSRSRS 187
Y RR R S R+RSRS
Sbjct: 194 PEYKRRSPRGSHRNRSRS 211
>gi|302808806|ref|XP_002986097.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
gi|300146245|gb|EFJ12916.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
Length = 262
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 121/179 (67%), Gaps = 5/179 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FY K+GACRHGDRCSR H KP S T LLLN+Y +P+ + A + + ++ EE
Sbjct: 19 VNCPFYLKMGACRHGDRCSRAHVKPKQSCT-LLLNMYQSPEITPGQA---YRNTAISKEE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+Q+ D F+EDVF E K+G++E + +C+N G+HL GNVY++FR EE A A+ LN R
Sbjct: 75 LQKDLDAFYEDVFKEV-SKHGKVEALKICNNFGNHLAGNVYVQFRHEEHAVAAMAALNGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
++ GRP+ AE SPVTDFREA CRQ E G C+R G CNF+HL SR L R L R S
Sbjct: 134 FYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCCNFLHLYRPSRALMRELMGDRSSS 192
>gi|221056112|ref|XP_002259194.1| U2 snRNP auxiliary factor, small subunit [Plasmodium knowlesi
strain H]
gi|193809265|emb|CAQ39967.1| U2 snRNP auxiliary factor, small subunit,putative [Plasmodium
knowlesi strain H]
Length = 308
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 137/191 (71%), Gaps = 4/191 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGD+CSR H KP +QT+++ ++Y NP + A+G + V D+
Sbjct: 16 VNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVAIAEGQMVEDEVLDK- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ F+E+VF E KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKAV +LN R
Sbjct: 75 AADHFEEFYEEVFEELM-KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 178
++ G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R LY R +K
Sbjct: 134 FYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRSVKRKLYKRMYKKF 193
Query: 179 SSRRSRSRSRD 189
+ R +++D
Sbjct: 194 PEYKKRRKTKD 204
>gi|156098591|ref|XP_001615311.1| U2 snRNP auxiliary factor, small subunit [Plasmodium vivax Sal-1]
gi|148804185|gb|EDL45584.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
vivax]
Length = 316
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 137/191 (71%), Gaps = 4/191 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGD+CSR H KP +QT+++ ++Y NP + A+G + V D+
Sbjct: 16 VNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVAIAEGQMVEDEVLDK- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ F+E+VF E KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKAV +LN R
Sbjct: 75 AADHFEEFYEEVFEELM-KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 178
++ G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R LY R +K
Sbjct: 134 FYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRAVKRKLYKRMYKKF 193
Query: 179 SSRRSRSRSRD 189
+ R +++D
Sbjct: 194 PEYKKRRKTKD 204
>gi|294877742|ref|XP_002768104.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239870301|gb|EER00822.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 273
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 115/164 (70%), Gaps = 2/164 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIG CRHGD+CSR HN+P SQT+LL +Y NP + A+G + D
Sbjct: 16 VNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIALAEGQDVADEQADA- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
QEH++ F+E+VF+E + YGEIE++ V DN+GDH++GNVY+K+ +EE +E + L R
Sbjct: 75 AQEHFEAFYEEVFLELAN-YGEIEDLAVVDNIGDHMIGNVYVKYVKEESSEMCIQKLTGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPI 164
++ GR + E SPVTDF EA CRQ++ +C+R GFCNF+H K +
Sbjct: 134 FYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 177
>gi|389583734|dbj|GAB66468.1| U2 snRNP auxiliary factor small subunit, partial [Plasmodium
cynomolgi strain B]
Length = 307
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 137/191 (71%), Gaps = 4/191 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGD+CSR H KP +QT+++ ++Y NP + A+G + V D+
Sbjct: 16 VNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVAIAEGQMVEDEVLDK- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ F+E+VF E KYGEIE+M VCDN+GDH++GNVYIK+ E+ AEKAV +LN R
Sbjct: 75 AADHFEEFYEEVFEELM-KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--RKR 178
++ G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R LY R +K
Sbjct: 134 FYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRAVKRKLYKRMYKKF 193
Query: 179 SSRRSRSRSRD 189
+ R +++D
Sbjct: 194 PEYKKRRKTKD 204
>gi|348683758|gb|EGZ23573.1| hypothetical protein PHYSODRAFT_370516 [Phytophthora sojae]
Length = 203
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 124/174 (71%), Gaps = 7/174 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP--QNSAKSADGSHLISNVTD 58
VNC FYFKIGACRHGDRCSR+HNKP FSQTIL+ ++Y NP Q A++ D + L D
Sbjct: 15 VNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPIAQVIAQNGDPASLDQRHVD 74
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE ++ Y+ FE++ K+G++EE+N+CDNLGDHLVGNVY K+ EE A A L
Sbjct: 75 EEFEDFYEEVFEELC-----KFGKLEELNICDNLGDHLVGNVYAKYEDEEHAAAAQKALY 129
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
R++ GRP+ E SPVTDFREA CRQ++ G C R G+CNFMH+K + R ++R L
Sbjct: 130 GRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPRSMQREL 183
>gi|414878158|tpg|DAA55289.1| TPA: hypothetical protein ZEAMMB73_300759 [Zea mays]
Length = 172
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 107/154 (69%), Gaps = 3/154 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIG CRHGDRCSR+HN+PT S T++L N+Y P D + E+
Sbjct: 16 VNCPFYFKIGVCRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQG--QPIDPEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED++ E K+GEIE +NVCDNL DH++GNVY++FR EE A A N L R
Sbjct: 74 MQEHFEDFYEDIYEEL-GKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAVAYNALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSG 154
++ GRP+ E SPVTDFREA CRQ+E C R G
Sbjct: 133 FYSGRPIIVEYSPVTDFREATCRQFEENSCNRGG 166
>gi|71027337|ref|XP_763312.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small subunit
[Theileria parva strain Muguga]
gi|68350265|gb|EAN31029.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Theileria parva]
Length = 235
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGD+CSR H KP+ +QT+++ ++Y NP + A+G +IS+ ++
Sbjct: 16 VNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPVAIAIAEG-QMISDELLDK 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ FFE+VF+E KYGEIE+M VCDN+GDH++GNVYIK+ E A +AV L+ R
Sbjct: 75 AADHFEEFFEEVFLE-LMKYGEIEDMIVCDNIGDHIIGNVYIKYSDEAAACRAVTSLSGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++GGRP+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R LRR L +R
Sbjct: 134 YYGGRPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVPRSLRRKLMTR 188
>gi|85000529|ref|XP_954983.1| U2 snRNP auxiliary factor [Theileria annulata strain Ankara]
gi|65303129|emb|CAI75507.1| U2 snRNP auxiliary factor, putative [Theileria annulata]
Length = 236
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGD+CSR H KP+ +QT+++ ++Y NP + A+G +IS+ ++
Sbjct: 16 VNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPVAIAIAEG-QMISDELLDK 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ FFE+VF+E KYGEIE+M VCDN+GDH++GNVYIK+ E A +AV L+ R
Sbjct: 75 AADHFEEFFEEVFLE-LMKYGEIEDMVVCDNIGDHIIGNVYIKYSDESAACRAVTSLSGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++GGRP+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R LRR L +R
Sbjct: 134 YYGGRPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVPRSLRRKLMTR 188
>gi|213688747|gb|ACJ53923.1| U2 small nuclear RNA auxiliary factor 1 [Bubalus bubalis]
Length = 110
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/112 (78%), Positives = 99/112 (88%), Gaps = 2/112 (1%)
Query: 31 ILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCD 90
I LLN+Y NPQNS++SADG L V+D EMQEHYD FFE+VF E E+KYGE+EEMNVCD
Sbjct: 1 IALLNIYRNPQNSSQSADG--LRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCD 58
Query: 91 NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACC 142
NLGDHLVGNVY+KFRREEDAEKAV DLNNRWF G+P++AELSPVTDFREACC
Sbjct: 59 NLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACC 110
>gi|118399961|ref|XP_001032304.1| zinc finger protein [Tetrahymena thermophila]
gi|89286644|gb|EAR84641.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 389
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 121/176 (68%), Gaps = 8/176 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACR+ ++C RIHN+P+ SQTIL+ ++Y N A G+ V++EE
Sbjct: 75 VNCPFYFKIGACRYENKCLRIHNRPSESQTILIKHMYQNSPTELALAQGNR----VSEEE 130
Query: 61 MQE---HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
Q+ HY+ F+E+VF+E YGEI+++ +CDN+GDH+ GNVY+K+ RE +A K + L
Sbjct: 131 AQKALNHYEEFYEEVFLELAS-YGEIDDLIICDNIGDHMKGNVYVKYVRESEALKCLMSL 189
Query: 118 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
R++ + + E SPVTDF A C+QY G+C RSG+CN++H KPI R RR L+
Sbjct: 190 KTRYYDKQQLQPEFSPVTDFSNAKCKQYIEGQCKRSGYCNYIHSKPIGRPFRRSLF 245
>gi|442763053|gb|JAA73685.1| Putative u2 snrnp splicing factor small subunit, partial [Ixodes
ricinus]
Length = 218
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 137/191 (71%), Gaps = 10/191 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FY+KIGACRHGD+ SR H KP+ +QT+++ ++Y NP + A+G +IS+ ++
Sbjct: 16 VNCPFYWKIGACRHGDQGSRAHYKPSAAQTLVIRHMYQNPPVAIAIAEG-QMISDELLDK 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H++ FFE+VF+E KYGEIE+M VCDN+GDH++GNVY+K+R E A A++ L+ R
Sbjct: 75 AADHFEEFFEEVFLE-LMKYGEIEDMVVCDNIGDHIIGNVYVKYRDENSAGLAISMLSGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR----- 175
++GG+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R +RR L R
Sbjct: 134 FYGGKPIQCEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRSVRRKLNERMYAEY 193
Query: 176 ---RKRSSRRS 183
R+RS RRS
Sbjct: 194 PEYRRRSPRRS 204
>gi|224011894|ref|XP_002294600.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
gi|220969620|gb|EED87960.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
Length = 197
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 118/174 (67%), Gaps = 5/174 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSA--KSADGSHLISN--V 56
VNC FYFKIGACRH DRCSRIH++P FS TIL+ ++Y +P A K+A + V
Sbjct: 16 VNCPFYFKIGACRHADRCSRIHHRPAFSPTILIKHIYRHPLREAELKAASEGRAVDGIEV 75
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
+ E +E + FFED F E K+G +E +++CDNLGDH+VG+VY KF EE+A A+N
Sbjct: 76 DEAEAREDFLVFFEDFFEEL-SKFGRLEALHICDNLGDHMVGHVYAKFSDEEEAADALNV 134
Query: 117 LNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 170
+N R++ GR + E SPVTDFREA CR ++ C R GFCNF+H+KP+ L R
Sbjct: 135 MNGRFYDGRKMEVEFSPVTDFREARCRDFDEETCRRGGFCNFLHIKPVPMCLIR 188
>gi|402585483|gb|EJW79423.1| U2 snRNP splicing factor small subunit, partial [Wuchereria
bancrofti]
Length = 160
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 107/146 (73%), Gaps = 9/146 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACRHGD+CSR+H +P S+TILL N Y G + + + E+
Sbjct: 23 VNCSFYLKIGACRHGDKCSRLHTRPISSKTILLKNFY---------HFGDIIRQDFSKEK 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q +D FF +V++E +++YGEI+EMNVCDN G+H++GNVYIKF E +A AV LNNR
Sbjct: 74 EQREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNASNAVKALNNR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYE 146
WF G+P++ ELSPV+DFR+ACCRQYE
Sbjct: 134 WFNGKPIHCELSPVSDFRDACCRQYE 159
>gi|66361760|ref|XP_627402.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
gi|46228867|gb|EAK89737.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
Length = 256
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FY+KIGACRHGD+CSR H KPT S T+++ ++Y N + A+G + + DEE
Sbjct: 23 VNCPFYWKIGACRHGDQCSRNHYKPTSSPTVIIRHIYENSPVALAIAEGQEVSDKLADEE 82
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ + F+E++F E KYGEI E+ +CDN+GDH++GNVYI+F EE A+ A+ +L +
Sbjct: 83 -SDKVEVFYEEMFKEL-SKYGEILELLICDNIGDHMIGNVYIRFSTEEYAKTALANLRGK 140
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
+ G+P+ ELSPV+DF+EA CRQY G C R G+CNFMH+K + R ++ ++ +
Sbjct: 141 MYAGKPINIELSPVSDFKEARCRQYIDGCCNRGGYCNFMHIKHVPRCVKDKIFDQ 195
>gi|67624011|ref|XP_668288.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis
TU502]
gi|54659468|gb|EAL38043.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis]
Length = 247
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FY+KIGACRHGD+CSR H KPT S T+++ ++Y N + A+G + + DEE
Sbjct: 16 VNCPFYWKIGACRHGDQCSRNHYKPTSSPTVIIRHIYENSPVALAIAEGQEVSDKLADEE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ + F+E++F E KYGEI E+ +CDN+GDH++GNVYI+F EE A+ A+ +L +
Sbjct: 76 -SDKVEVFYEEIFKEL-SKYGEILELLICDNIGDHMIGNVYIRFSTEEYAKTALLNLRGK 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
+ G+P+ ELSPV+DF+EA CRQY G C R G+CNFMH+K + R ++ ++ +
Sbjct: 134 LYAGKPINIELSPVSDFKEARCRQYIDGCCNRGGYCNFMHIKHVPRCVKDKIFDQ 188
>gi|399217872|emb|CCF74759.1| unnamed protein product [Babesia microti strain RI]
Length = 234
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 120/175 (68%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHG++CSR H +P+ +QTI++ ++Y NP + ++G + V D+
Sbjct: 16 VNCPFFWKIGACRHGEQCSRSHYRPSSAQTIVIKHMYQNPPIAIAISEGQMVSDEVYDQA 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ F E C KYGE+E+M VCDN+GDH++GNVY+K+ E A A++ L+ R
Sbjct: 76 ADHFEEFFEEVFLELC--KYGEVEDMIVCDNIGDHIIGNVYVKYSDEMSAANAISTLSGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
++GG+ + E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R LRR L ++
Sbjct: 134 FYGGKQIMVEYTPVTDFREARCRQFVDGQCKRGGYCNFMHVKHVPRSLRRKLMNK 188
>gi|125527192|gb|EAY75306.1| hypothetical protein OsI_03197 [Oryza sativa Indica Group]
Length = 263
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 102/148 (68%), Gaps = 3/148 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++ N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTVVFANMYQRPDMITPGVDAQG--QPIDPRQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEELS-KFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMG 148
++ GRP+ + SPVTDFREA CRQ +G
Sbjct: 133 FYSGRPIIVDFSPVTDFREATCRQLGLG 160
>gi|125527197|gb|EAY75311.1| hypothetical protein OsI_03202 [Oryza sativa Indica Group]
Length = 265
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 103/152 (67%), Gaps = 3/152 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T++ N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSRLHNRPTISPTVVFANMYQRPDMITPGVDAQG--QPIDPRQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEELS-KFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTR 152
++ GRP+ + SPVTDFREA CRQ +G R
Sbjct: 133 FYSGRPIIVDFSPVTDFREATCRQLGLGRDLR 164
>gi|15988329|pdb|1JMT|A Chain A, X-Ray Structure Of A Core U2af65U2AF35 HETERODIMER
Length = 104
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/106 (78%), Positives = 94/106 (88%), Gaps = 2/106 (1%)
Query: 28 SQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMN 87
SQTI LLN+Y NPQNS++SADG L S V+D EMQEHYD FFE+VF E E+KYGE+EEMN
Sbjct: 1 SQTIALLNIYRNPQNSSQSADG--LRSAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMN 58
Query: 88 VCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 133
VCDNLGDHLVGNVY+KFRREEDAEKAV DLNNRWF G+P++AELSP
Sbjct: 59 VCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSP 104
>gi|432119315|gb|ELK38408.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 121
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 98/133 (73%), Gaps = 27/133 (20%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCS +HNKPTFSQT+ LLN+Y NP NS++SAD E
Sbjct: 16 VNCSFYFKIGACRHGDRCSWLHNKPTFSQTVALLNVYRNPHNSSQSAD-----------E 64
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
M+ KYGE+EEMNVCDNL DHLVGNVY++FR EEDAEKAV DL+NR
Sbjct: 65 ME----------------KYGEVEEMNVCDNLRDHLVGNVYVQFRPEEDAEKAVMDLDNR 108
Query: 121 WFGGRPVYAELSP 133
WF G+P+YAELSP
Sbjct: 109 WFNGQPIYAELSP 121
>gi|226489603|emb|CAX74952.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 123
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/89 (91%), Positives = 84/89 (94%)
Query: 86 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 145
MNVCDNLGDHLVGNVYIKFRREEDAEKAV DLN RWFGGRPV+AELSPVTDFREACCRQY
Sbjct: 1 MNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQY 60
Query: 146 EMGECTRSGFCNFMHLKPISRELRRYLYS 174
E+GECTR GFCNFMHLKPISREL R LY+
Sbjct: 61 ELGECTRGGFCNFMHLKPISRELCRKLYN 89
>gi|403331231|gb|EJY64551.1| U2 splicing factor subunit, putative [Oxytricha trifallax]
Length = 452
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 115/157 (73%), Gaps = 2/157 (1%)
Query: 13 RHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDV 72
+HGD C+R+HNKP +QTIL+ ++Y NP + ADG + ++ E + H+++F+E+V
Sbjct: 15 KHGDTCTRLHNKPVVAQTILMPHMYENPPAAVAFADGLQVPDHLLIEAI-NHFESFYEEV 73
Query: 73 FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 132
F+E KYGE+EEM++CDN+G+HL+GNVY KF +E DA+KA+ LN R++ G+ + E S
Sbjct: 74 FLELA-KYGEVEEMHICDNIGEHLLGNVYCKFIQELDADKAMRGLNGRYYAGKQIKVEFS 132
Query: 133 PVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 169
PVTDF E+ CR Y G+C R G+CNFMHLK +++E +
Sbjct: 133 PVTDFNESRCRLYVEGQCDRGGYCNFMHLKHMTKEFQ 169
>gi|222619017|gb|EEE55149.1| hypothetical protein OsJ_02948 [Oryza sativa Japonica Group]
Length = 263
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 101/148 (68%), Gaps = 3/148 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCS +HN+PT S T++ N+Y P D + +
Sbjct: 16 VNCPFYFKIGACRHGDRCSCLHNRPTISPTVVFANMYQRPDMITPGVDAQG--QPIDPRQ 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
MQEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R
Sbjct: 74 MQEHFEDFYEDIFEELS-KFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGR 132
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMG 148
++ GRP+ + SPVTDFREA CRQ +G
Sbjct: 133 FYSGRPIIVDFSPVTDFREATCRQLGLG 160
>gi|344304841|gb|EGW35073.1| hypothetical protein SPAPADRAFT_130696 [Spathaspora passalidarum
NRRL Y-27907]
Length = 251
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
V C+FY KIGACRHG++CS+ H KPT S+T+LL NLY NP+ + D + +T ++
Sbjct: 17 VTCAFYNKIGACRHGEKCSKKHIKPTTSRTLLLSNLYQNPKLKTATTDDAE--DELTPKQ 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D F+ D+FV GEI ++ VC+N +HL GNVY++++ E DA +++ LN+
Sbjct: 75 IQEIFDQFYRDIFVHFATT-GEISQLVVCENENNHLNGNVYVRYKSETDASESMKQLNSE 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
WF GRPV+ ELSPV F EA CR YE C+R CN+MH++ +++L L+ ++++
Sbjct: 134 WFNGRPVHCELSPVDSFSEANCRAYETDVCSRGEHCNYMHVRKPTKKLADDLFKAQEKT 192
>gi|448519331|ref|XP_003868065.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis Co 90-125]
gi|380352404|emb|CCG22630.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis]
Length = 280
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 116/178 (65%), Gaps = 7/178 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+ CSFY KIGACRHG++CS+ H KPT S+T+LL NLY NP+ + ++ VT+++
Sbjct: 46 ITCSFYNKIGACRHGEKCSKKHIKPTTSKTLLLANLYQNPKLNKNESE------EVTEKQ 99
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D F++D+F+ + GEI + VC+N +HL GNVY++F DA LN
Sbjct: 100 IQEQFDLFYQDIFIHLAN-MGEIYDFVVCENENNHLNGNVYVQFVSSSDASTVNTTLNQE 158
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF GRPV+++LSPVTDF +A CR Y+ C R CN+MH++ S +LR LY + +
Sbjct: 159 WFNGRPVHSDLSPVTDFADARCRAYDTNSCERGEMCNYMHIRQPSPKLRELLYKAQDK 216
>gi|145484545|ref|XP_001428282.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395367|emb|CAK60884.1| unnamed protein product [Paramecium tetraurelia]
Length = 312
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACR+ ++C RIH+ P SQTIL ++Y N A G + +S EE
Sbjct: 16 VNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPMEVAIASG-NAVSQAGIEE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
E ++NF+EDVF++ + +GEIE++ VC+N+GDHLVGNVY+K+ E AE N L N
Sbjct: 75 ALEKFENFYEDVFLKLAE-FGEIEDLIVCENIGDHLVGNVYVKYTSELFAESCFNTLQNL 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
+ RP+ E SPV DF A C+QY G C R G CN++HLK IS + ++ L+++
Sbjct: 134 SYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKISTKFKKSLFNQ 188
>gi|294654416|ref|XP_456476.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
gi|199428865|emb|CAG84428.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
Length = 234
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 118/180 (65%), Gaps = 7/180 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+ C+FY KIGACRHG++CSR H KP+ S TILL NLY NP+ DG L ++
Sbjct: 8 IICTFYTKIGACRHGEKCSRKHVKPSSSDTILLPNLYQNPK--LNKNDGEEL----NPKQ 61
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE++D+F++D+F++ +GE+ M VC+N +HL GNVY+KF E+ A AV LN
Sbjct: 62 VQEYFDHFYKDIFLKFA-LFGEVYSMVVCENDNNHLNGNVYVKFANEDSAYNAVMLLNQE 120
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
WFGGRPV+ ELSPV F +A CR YE C R CNFMH+ + +L+ L+ +++S+
Sbjct: 121 WFGGRPVHCELSPVESFHDANCRAYESSTCNRGDHCNFMHIHKPTPQLKSSLFKSQEKST 180
>gi|393907857|gb|EFO28010.2| hypothetical protein LOAG_00486 [Loa loa]
Length = 251
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR H++PTFS T+LL N Y NP + AD + DEE
Sbjct: 132 VNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVDVRQADAFDKVGKKNDEE 191
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q ++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NR
Sbjct: 192 -QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKAVKDLENR 250
Query: 121 W 121
W
Sbjct: 251 W 251
>gi|145477617|ref|XP_001424831.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391898|emb|CAK57433.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACR+ ++C RIH+ P SQTIL ++Y N A G + +S EE
Sbjct: 16 VNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPMEVAIASG-NAVSQAGIEE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
E ++NF+EDVF++ + +GEIE++ VC+N+GDHLVGNVY+K+ E AE N L N
Sbjct: 75 ALEKFENFYEDVFLKLAE-FGEIEDLIVCENIGDHLVGNVYVKYTSELFAESCFNALQNL 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
+ RP+ E SPV DF A C+QY G C R G CN++HLK IS + ++ L+++
Sbjct: 134 SYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKISTKFKKSLFNQ 188
>gi|145478691|ref|XP_001425368.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392438|emb|CAK57970.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACR+ ++C RIH+ P SQTIL ++Y N A G + +S EE
Sbjct: 16 VNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPIEVAIASG-NAVSQAGIEE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
E ++NF+EDVF++ + +GEIE++ VC+N+GDHLVGNVY+K+ E AE N L N
Sbjct: 75 ALEKFENFYEDVFLKLAE-FGEIEDLIVCENIGDHLVGNVYVKYTSEYYAEGCFNALQNL 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
+ RP+ E SPV DF A C+QY G C R G CN++HLK IS + ++ L+++
Sbjct: 134 SYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKISTKFKKSLFNQ 188
>gi|324505230|gb|ADY42252.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 151
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGD+CSR H++PTFS TILL N Y NP + AD + D E
Sbjct: 32 VNCSFYFKIGACRHGDKCSRTHHRPTFSPTILLQNFYHNPVVDVRQADAFDKVGK-KDPE 90
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q+++D F+E+VF E E KYGEI+EMNVC+N+G+H++GNVY+KF REEDAEKAV DL NR
Sbjct: 91 EQKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFVREEDAEKAVKDLQNR 150
Query: 121 W 121
W
Sbjct: 151 W 151
>gi|145530874|ref|XP_001451209.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418853|emb|CAK83812.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY KIGACR+ ++C RIH+ P SQTIL ++Y N A G + +S EE
Sbjct: 16 VNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPIEVAIASG-NAVSQAGIEE 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
E ++NF+EDVF++ + +GEIE++ VC+N+GDHLVGNVY+K+ E AE N L N
Sbjct: 75 ALEKFENFYEDVFLKLAE-FGEIEDLIVCENIGDHLVGNVYVKYTSEYYAEGCFNALQNL 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
+ +P+ E SPV DF A C+QY G C R G CN++HLK I+ + ++ L+++
Sbjct: 134 SYENKPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKIATKFKKSLFNQ 188
>gi|407044754|gb|EKE42803.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
Length = 227
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 126/188 (67%), Gaps = 11/188 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC+F+FKIGACRHGD C+R H +P S+TILL +LY NP + S++T++E
Sbjct: 16 VNCAFFFKIGACRHGDSCTRNHFQPEISRTILLTHLYDNPYIHKEE-------SSMTEDE 68
Query: 61 MQEH---YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
++ ++ F+ED+F E K+GEI+EM VC NL +H+ GNVY++FR E++A +A+ L
Sbjct: 69 KKKIKKDFNIFYEDIFNELA-KHGEIDEMLVCRNLSEHMTGNVYVRFRDEKNASEAMKFL 127
Query: 118 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
R++ GR + S VTDF+EA C+QYE GEC R GFCNF+H+ + L+R L+ R+
Sbjct: 128 LARYYAGRMIQPSYSHVTDFKEARCKQYESGECDRHGFCNFLHVIEPNHSLQRKLFERQP 187
Query: 178 RSSRRSRS 185
+R R+
Sbjct: 188 LRQKRIRN 195
>gi|67474354|ref|XP_652926.1| U2 auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56469830|gb|EAL47539.1| U2 auxiliary factor, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709632|gb|EMD48863.1| U2 auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 227
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 126/188 (67%), Gaps = 11/188 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC+F+FKIGACRHGD C+R H +P S+TILL +LY NP + S++T++E
Sbjct: 16 VNCAFFFKIGACRHGDSCTRNHFQPEISRTILLTHLYDNPYIHKEE-------SSMTEDE 68
Query: 61 MQEH---YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
++ ++ F+ED+F E K+GEI+EM VC NL +H+ GNVY++FR E++A +A+ L
Sbjct: 69 KKKIKKDFNIFYEDIFNELA-KHGEIDEMLVCRNLSEHMTGNVYVRFRDEKNASEAMKFL 127
Query: 118 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
R++ GR + S VTDF+EA C+QYE GEC R GFCNF+H+ + L+R L+ R+
Sbjct: 128 LARYYAGRMIQPSYSHVTDFKEARCKQYESGECDRHGFCNFLHVIEPNHSLQRKLFERQP 187
Query: 178 RSSRRSRS 185
+R R+
Sbjct: 188 LRQKRIRN 195
>gi|190347807|gb|EDK40149.2| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 109/171 (63%), Gaps = 15/171 (8%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C+FY KIGACRHGD+CSR H P S TIL+ NLY NP+ S+ +++Q
Sbjct: 5 CTFYSKIGACRHGDKCSRRHIHPRRSDTILIFNLYRNPKGSS--------------QQIQ 50
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
+ +D F++DVFV + GEI+ M VC+N DHL GNVY+KF + AE +N LN W+
Sbjct: 51 QRFDQFYQDVFVYIA-RIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNEEWY 109
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
P++ ELSPV F++A CR Y+ G C+R G CNFMH++ + E++ L+
Sbjct: 110 DALPIHCELSPVESFQDANCRAYDAGACSRGGHCNFMHIRRPTPEVKSVLH 160
>gi|146415096|ref|XP_001483518.1| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 109/171 (63%), Gaps = 15/171 (8%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C+FY KIGACRHGD+CSR H P S TIL+ NLY NP+ S+ +++Q
Sbjct: 5 CTFYSKIGACRHGDKCSRRHIHPRRSDTILIFNLYRNPKGSS--------------QQIQ 50
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
+ +D F++DVFV + GEI+ M VC+N DHL GNVY+KF + AE +N LN W+
Sbjct: 51 QRFDQFYQDVFVYIA-RIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNEEWY 109
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
P++ ELSPV F++A CR Y+ G C+R G CNFMH++ + E++ L+
Sbjct: 110 DALPIHCELSPVESFQDANCRAYDAGACSRGGHCNFMHIRRPTPEVKSVLH 160
>gi|149244812|ref|XP_001526949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449343|gb|EDK43599.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 295
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 118/184 (64%), Gaps = 9/184 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+ C FY KIGACRHG++CS+ H KPT S+T++L NLY NP+ + +D ++ +
Sbjct: 52 ITCQFYNKIGACRHGEKCSKKHIKPTNSKTLILANLYQNPKLNKNESD------ELSQLQ 105
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE D FF+DVF+ K GE+ + VC+N +HL GNVY++F E+DA++A +LN
Sbjct: 106 LQESLDLFFQDVFIHLSQK-GEVASLVVCENENNHLNGNVYVRFYSEKDAQQANQELNQE 164
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY--SRRKR 178
WF GRPV+++LSPV F EA CR Y+ C R CN+MHL+ ++ L L +K
Sbjct: 165 WFNGRPVHSDLSPVYSFDEARCRAYDTNSCERGEMCNYMHLRLPTKSLLDKLTQGQEKKY 224
Query: 179 SSRR 182
+S+R
Sbjct: 225 ASKR 228
>gi|260945991|ref|XP_002617293.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
gi|238849147|gb|EEQ38611.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
Length = 258
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 15/185 (8%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C+FY KIGACRHGD+CSR H +PT S+T+LL NLY K +
Sbjct: 37 CTFYQKIGACRHGDKCSRKHIRPTESKTVLLANLYTQSAEKNKVSP-------------- 82
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
E +D F+ D++ GEIE+M VC+N HL GNVY+++ + A+KAV LN W+
Sbjct: 83 ESFDQFYADIYTHAAQS-GEIEQMVVCENENFHLCGNVYVRYSDTQSADKAVAQLNQEWY 141
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRR 182
GGRPVY ELSPV++F EA CR Y+ +C+R CNFMH + S ELR L +++S
Sbjct: 142 GGRPVYCELSPVSNFAEANCRAYDNNQCSRGDHCNFMHTRRPSSELRAQLRQAQRKSLAL 201
Query: 183 SRSRS 187
++ R+
Sbjct: 202 AKIRA 206
>gi|344234071|gb|EGV65941.1| splicing factor U2AF 23 kDa subunit [Candida tenuis ATCC 10573]
Length = 213
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 9/179 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+NC FY KIGACRHG++CS+ H KP S T+LL NLY NP+ + D + ++
Sbjct: 5 MNCQFYTKIGACRHGEKCSKRHTKPLTSYTVLLANLYQNPKLNKNEQD-------LNPKQ 57
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
++E+++NF++DVF+ K EI + VC+N +HL GNVY +F+ EE A +AV +LN
Sbjct: 58 IREYFENFYKDVFIRL-GKIEEIAALVVCENENNHLNGNVYCRFKNEEGARRAVVELNQE 116
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
WFG RPV+ ELSPV F +A CR Y+ C+R CNFMH+ S EL R L+S + +S
Sbjct: 117 WFGSRPVHCELSPVQSFHDANCRDYDTNSCSRDH-CNFMHVIRPSDELERQLFSAQAKS 174
>gi|211939918|gb|ACJ13439.1| U2 snRNP auxiliary factor [Amphidinium carterae]
Length = 203
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 111/170 (65%), Gaps = 2/170 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACR+GDRC+R+H +PT T+L+ LY + + A+ +V +
Sbjct: 19 VNCPFYFKIGACRNGDRCNRMHTRPTKGHTLLIPRLYPSIPEALVVANDDEW-DDVQYDL 77
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
Q H + F+++V++E YGE+E+M V DN+ DH++GN+Y+++ REEDAE A L+NR
Sbjct: 78 AQAHCEAFYQEVWLEL-SSYGEVEDMVVLDNVSDHMLGNIYVRYYREEDAEVAAQKLSNR 136
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 170
++G R + E SPV +F EA CR Y C R G CNFMH K I + +RR
Sbjct: 137 FYGTRLIQVEYSPVANFSEARCRTYHETRCARGGLCNFMHTKHIPKAIRR 186
>gi|167377957|ref|XP_001734607.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165903812|gb|EDR29241.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 227
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 124/185 (67%), Gaps = 5/185 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC+F+FKIGACRHGD C+R H +P S+TILL +LY NP + ++ ++
Sbjct: 16 VNCAFFFKIGACRHGDSCTRNHFQPEISRTILLTHLYDNPYIHKEENS----MTEEEKKK 71
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+++ ++ F+ED+F E K+GE++EM VC NL +H+ GNVY++FR E++A +A+ L R
Sbjct: 72 IKKDFNIFYEDIFNELA-KHGEVDEMLVCGNLSEHMTGNVYVRFRDEKNASEAMKFLLAR 130
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSS 180
++ GR + S VTDF+EA C+QYE GEC R GFCNF+H+ + L+R L+ R+
Sbjct: 131 YYAGRMIQPSYSHVTDFKEARCKQYECGECDRHGFCNFLHVIEPNHSLQRKLFERQPLRQ 190
Query: 181 RRSRS 185
+R ++
Sbjct: 191 KRIKN 195
>gi|150951186|ref|XP_001387460.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23) [Scheffersomyces stipitis CBS 6054]
gi|149388389|gb|EAZ63437.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23), partial [Scheffersomyces stipitis CBS 6054]
Length = 184
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 115/176 (65%), Gaps = 7/176 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C+FY KIGACRHG++CSR H +P S TILL NLY NP+ + + + +++Q
Sbjct: 16 CTFYNKIGACRHGEKCSRKHIRPLTSFTILLPNLYQNPKLNKNEGE------ELNPKQLQ 69
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
+++D FF+D+FV+ GEI+E+ VC+N +HL GNVY++F+ +++A +A LN WF
Sbjct: 70 QNFDQFFKDIFVKFAT-LGEIKELVVCENENNHLNGNVYVRFKTKQEAAEATLLLNQEWF 128
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
RPV+ ELSPV+ F EA CR YE CTR CNFMH++ ++ L L+ + +
Sbjct: 129 NARPVHCELSPVSSFPEANCRAYETSSCTRGDHCNFMHVRHPTQSLVESLFQSQTK 184
>gi|354544051|emb|CCE40773.1| hypothetical protein CPAR2_108080 [Candida parapsilosis]
Length = 307
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 7/178 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+ C+FY KIGACRHG++CS+ H KPT S+T+LL NLY NP+ + + +T+++
Sbjct: 75 ITCAFYNKIGACRHGEKCSKKHIKPTTSKTLLLANLYQNPKLNKNETE------ELTEKQ 128
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+QE +D F++D+F+ GEI ++ VC+N +HL GNVY++F DA LN
Sbjct: 129 IQEQFDLFYQDIFIHL-GSMGEIYDLVVCENENNHLNGNVYVQFNSASDASLVNTALNQE 187
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
WF GRPV+++LSPV F +A CR Y+ C R CN+MH++ + L++ LY + +
Sbjct: 188 WFNGRPVHSDLSPVDSFPDAHCRAYDTNSCERGEMCNYMHIRQPTTSLKQSLYKAQDK 245
>gi|448097995|ref|XP_004198814.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359380236|emb|CCE82477.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C+FY KIGACRHG++CSR H KPT S TIL+ NLY NP+ S A+G + ++E+Q
Sbjct: 10 CTFYTKIGACRHGEKCSRRHIKPTSSDTILMPNLYKNPKFSNNEANGQQ-VPITGEKELQ 68
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
+H+++F++DVFV G+++ M VC+N +HL GNVYIKF + A AV LN W+
Sbjct: 69 QHFEDFYKDVFVRAA-TLGKVDAMVVCENNNNHLNGNVYIKFSSRDIAYDAVVKLNQEWY 127
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
GRPVY ELSPV +A CR Y+ C+R CNFMH++ S L+ +L+ +++S
Sbjct: 128 DGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFMHIRRPSPGLKNFLFRAQEKS 184
>gi|209882274|ref|XP_002142574.1| U2 snRNP auxiliary factor small subunit [Cryptosporidium muris
RN66]
gi|209558180|gb|EEA08225.1| U2 snRNP auxiliary factor small subunit, putative [Cryptosporidium
muris RN66]
Length = 255
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 116/178 (65%), Gaps = 2/178 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FY+KIGACRHGD+CSR H KPT S T+++ ++Y N S A+G + + D E
Sbjct: 16 VNCPFYWKIGACRHGDQCSRSHYKPTNSPTVIIRHMYENSPISLAIAEGQVVDDKLADNE 75
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ + E KYGEI ++ VCDN+GDH++GNVY+++ EE A+ A++ L R
Sbjct: 76 SDRFEEFYEEIFEELA--KYGEISDLLVCDNIGDHMIGNVYVRYTNEEYAKSALDKLKGR 133
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
+ G+ + AELSPV+DF+EA CRQ+ G C R G+CNFMH+K I R ++ ++ + R
Sbjct: 134 SYSGKLIDAELSPVSDFKEARCRQFIDGCCNRGGYCNFMHIKHIPRCVKNKIFQQMYR 191
>gi|448101861|ref|XP_004199664.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359381086|emb|CCE81545.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 118/178 (66%), Gaps = 4/178 (2%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE-EM 61
C+FY KIGACRHG++CSR H KPT S TIL+ NLY NP+ + +G + +TDE E+
Sbjct: 10 CTFYTKIGACRHGEKCSRRHIKPTSSDTILMPNLYKNPRFANNEGNGQQ--APITDEKEL 67
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
Q+H+++F++DVFV G+++ M VC+N +HL GNVYIKF + A AV LN W
Sbjct: 68 QQHFEDFYKDVFVRAA-TLGKVDAMVVCENNNNHLNGNVYIKFASRDIAYDAVVKLNQEW 126
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
+ GRPVY ELSPV +A CR Y+ C+R CNFMH++ S L+ +L+ +++S
Sbjct: 127 YDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFMHIRRPSPGLKSFLFRAQEKS 184
>gi|440302723|gb|ELP95030.1| splicing factor U2AF 35 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 263
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 112/172 (65%), Gaps = 5/172 (2%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+FKIGACRHGD C + H +P SQT+L +Y NP+ ++G +++M+
Sbjct: 19 CDFFFKIGACRHGDSCKKQHFRPESSQTLLFTRMYQNPKIRIDESEGL----EKDEKKMR 74
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
++ F+EDVF + ++ YGE+EE VC N DH++GNVY+K+ +EE+A+KA ++L R++
Sbjct: 75 HDFNEFYEDVFSQIQN-YGEVEEFIVCGNDNDHMMGNVYVKYTKEEEAKKAKDELTGRYY 133
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
G+ + VTDFREA CRQ E G CTR G CNF+H+ L+R L++
Sbjct: 134 AGKMLQPSFCRVTDFREAICRQQEQGTCTRGGQCNFIHVIEPDPSLKRGLFA 185
>gi|440295153|gb|ELP88066.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 198
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 119/185 (64%), Gaps = 11/185 (5%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSF++K+GACRHGD CSR H++P S TILL N+Y NP + + +T +E
Sbjct: 16 VNCSFFYKVGACRHGDACSRNHHRPEVSPTILLTNMYDNPLSHKEE-------EKMTADE 68
Query: 61 MQ---EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
++ + ++ F+EDVF E ++ GEI+EM VC NL +H++GNV+++F + AE A+ L
Sbjct: 69 LKVVRDGFNVFYEDVFNELAER-GEIDEMIVCANLNEHMLGNVFVRFHDVKGAESAMKIL 127
Query: 118 NNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
R++GGR + S VTDFR+A C+Q E G C R GFCNF+H+ + L+R L R+
Sbjct: 128 LARYYGGRMIQPSYSHVTDFRDAKCKQQEAGNCERGGFCNFIHVLEPNHALKRKLLERQP 187
Query: 178 RSSRR 182
+R
Sbjct: 188 LRRQR 192
>gi|70952191|ref|XP_745280.1| U2 snRNP auxiliary factor, small subunit [Plasmodium chabaudi
chabaudi]
gi|56525554|emb|CAH89145.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 299
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 124/193 (64%), Gaps = 8/193 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC F++KIGACRHGD+CSR H KP +QT+++ ++Y NP + A+G + V D+
Sbjct: 16 VNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVAIAEGQMVDDEVLDQ- 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMN-VCDNLGDHLVGN-VYIKFRREEDAEKAVNDLN 118
+H++ F+E+VF E EIE+ VCDN GDH + + E+ AEKA+ +LN
Sbjct: 75 AADHFEEFYEEVFDEL--MKXEIEDXGXVCDN-GDHXYWKCLXLNIHXEDYAEKAIKELN 131
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR--R 176
R++ G+P+ E +PVTDFREA CRQ+ G+C R G+CNFMH+K + R ++R L+ R +
Sbjct: 132 GRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRTVKRRLHKRMYK 191
Query: 177 KRSSRRSRSRSRD 189
K + +SRD
Sbjct: 192 KFPMYKKNRKSRD 204
>gi|99014572|emb|CAK22276.1| putative U2 snRNP auxiliary factor [Chenopodium rubrum]
Length = 151
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
Query: 56 VTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVN 115
+ ++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY+++R EE+A A
Sbjct: 14 IDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQYREEEEAANAHR 72
Query: 116 DLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
+L+ R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRELRR L+ R
Sbjct: 73 NLSGRFYAGRPIIVDFSPVTDFREATCRQYEENNCNRGGYCNFMHLKRISRELRRQLFGR 132
Query: 176 RKR 178
+R
Sbjct: 133 YRR 135
>gi|401881081|gb|EJT45386.1| splicing factor [Trichosporon asahii var. asahii CBS 2479]
Length = 128
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 98/134 (73%), Gaps = 10/134 (7%)
Query: 22 HNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVE-CEDKY 80
H KP FSQT+LL N+Y NP ++ + +T +E+Q +D F+ED F+E C KY
Sbjct: 4 HIKPQFSQTVLLPNVYNNPSHTPEGL-------TMTKDELQADFDRFYEDFFIELC--KY 54
Query: 81 GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREA 140
G ++EM+VCDN+GDHL GNVY+++ E +A KAV LNNRW+G RP++AELSPV+DFREA
Sbjct: 55 GNVQEMHVCDNIGDHLEGNVYVRYEWEAEANKAVEQLNNRWYGMRPLHAELSPVSDFREA 114
Query: 141 CCRQYEMGECTRSG 154
CCRQ E+GEC R G
Sbjct: 115 CCRQNELGECKREG 128
>gi|397625258|gb|EJK67720.1| hypothetical protein THAOC_11212 [Thalassiosira oceanica]
Length = 188
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 107/160 (66%), Gaps = 7/160 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP-----QNSAKSADGSHLISN 55
VNC FYFKIGACRHGDRCSR H+KP FSQT+L+ ++Y +P N+A+ +I
Sbjct: 16 VNCPFYFKIGACRHGDRCSRHHHKPAFSQTVLIKHIYRHPIREAELNAARMGQSVDVI-Q 74
Query: 56 VTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVN 115
+ + + +E + +F+ED + E K+G IE +++CDNLGDH++G+ Y KF EE+A A+N
Sbjct: 75 IDEAKAKEDFLSFYEDFYEELS-KFGRIEALHICDNLGDHMLGHAYCKFSEEEEAADALN 133
Query: 116 DLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGF 155
+N R++ GR + E SPV DFREA CR ++ C R G
Sbjct: 134 VMNGRYYDGRQMEVEFSPVLDFREARCRDFDEDSCRRGGI 173
>gi|255730555|ref|XP_002550202.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132159|gb|EER31717.1| predicted protein [Candida tropicalis MYA-3404]
Length = 481
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 120/216 (55%), Gaps = 40/216 (18%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP-----------QNS-------- 43
CSFY K+GACRH RC++ H PT S TI + NLY NP +NS
Sbjct: 221 CSFYTKVGACRHYGRCTKRHIDPTVSNTIKISNLYPNPLAKYDFPDDEDENSEGSEVEEA 280
Query: 44 -----------AKSADGSHLIS---------NVTDEEMQEHYDNFFEDVFVECEDKYGEI 83
+SA G +S +T+EE+QE +D F++DVF K GEI
Sbjct: 281 DAGVDVDVNGNKESASGEKTVSKPSNYEPEVQLTEEEIQEKFDLFYKDVFTHI-SKLGEI 339
Query: 84 EEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCR 143
+ + VC+N+ +HL GNVY++F R ++A +A LN+ WF RPVY+ LSPV DF EA C
Sbjct: 340 KNLVVCENVNNHLNGNVYVQFVRTQEASEASKQLNSEWFNERPVYSTLSPVRDFEEAYCH 399
Query: 144 QYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
+Y +G C CN+MHL+ + +L + +Y +++S
Sbjct: 400 EYSVGACEHGERCNYMHLRYPTPDLEQKMYRSQEKS 435
>gi|255730573|ref|XP_002550211.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
gi|240132168|gb|EER31726.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
Length = 293
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 124/223 (55%), Gaps = 40/223 (17%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ--NSAKSADGS-HLIS--- 54
V C FY +IGACRHG+ CS+ H +P S TI+L NLY NP+ S + +GS LI
Sbjct: 33 VVCLFYTRIGACRHGENCSKKHIRPNSSNTIMLANLYQNPKVKKSNNTDNGSEQLIPASE 92
Query: 55 ---------------------------------NVTDEEMQEHYDNFFEDVFVECEDKYG 81
+ T+EE+QE++D F+ DVFV +
Sbjct: 93 SGKTEVEMANEEEPQEDKEEKSQQQKEVEESEVDPTEEEIQEYFDQFYADVFVHI-SQMR 151
Query: 82 EIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREAC 141
I +++VC+N DHL GNVY++F EEDA LN+ WF RPVY+ELSPV+DF EA
Sbjct: 152 PIYKLSVCENQNDHLNGNVYVQFFSEEDAGFVNRQLNSEWFNERPVYSELSPVSDFEEAH 211
Query: 142 CRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSR 184
CR Y+ G C R G CN+MH++ + EL L+ +++S+ + R
Sbjct: 212 CRAYDNGGCDRGGRCNYMHVRQPTEELFDELFRCQQKSAFQKR 254
>gi|363756078|ref|XP_003648255.1| hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891455|gb|AET41438.1| Hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
Length = 258
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 109/165 (66%), Gaps = 15/165 (9%)
Query: 5 FYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ-E 63
FY+KIGACRHGD+CS+ H++P SQTI++ N+YI P +++ ++Q E
Sbjct: 63 FYYKIGACRHGDKCSKRHSRPINSQTIVIYNMYIPP-------------NDINQVKLQAE 109
Query: 64 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 123
+D F+EDVF+E K+GE++E+ VC+N DHL GNVYI+F + A+ A + RW+G
Sbjct: 110 DFDFFYEDVFLEAA-KFGEVQEIIVCENKTDHLNGNVYIRFSTSDAAKAARDAFVTRWYG 168
Query: 124 GRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
RP+Y +LS VTDFREA C+ YE G+C R CNF+H + + L
Sbjct: 169 ERPLYCDLSHVTDFREAVCKSYEEGKCGRGEQCNFIHRRRVDYSL 213
>gi|255715815|ref|XP_002554189.1| KLTH0E16302p [Lachancea thermotolerans]
gi|238935571|emb|CAR23752.1| KLTH0E16302p [Lachancea thermotolerans CBS 6340]
Length = 189
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 103/165 (62%), Gaps = 14/165 (8%)
Query: 5 FYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEH 64
FY+KIGACRHGDRCS+ H +P S T+L+ N+Y P++ A Q
Sbjct: 25 FYYKIGACRHGDRCSKKHIRPLHSPTVLVPNMYRRPESEGPEAQ-------------QRD 71
Query: 65 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 124
+D F+EDV++E K+GE++ M VC+N DHL GNVY+ F DA A + N RWF
Sbjct: 72 FDAFYEDVYMEA-CKFGELQAMVVCENKNDHLNGNVYLMFTNSRDANSAKDSFNTRWFNE 130
Query: 125 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 169
RP+Y E S V+DFREA CR+++M C R CNFMH++ +R+L+
Sbjct: 131 RPLYCEFSHVSDFREAICRKHDMRSCERGDECNFMHVQRPTRDLQ 175
>gi|281354289|gb|EFB29873.1| hypothetical protein PANDA_009769 [Ailuropoda melanoleuca]
Length = 204
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 85/131 (64%), Gaps = 41/131 (31%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 94
Query: 121 WFGGRPVYAEL 131
WF G+ V+AEL
Sbjct: 95 WFNGQAVHAEL 105
>gi|358375412|dbj|GAA91994.1| splicing factor U2AF 23 kDa subunit [Aspergillus kawachii IFO 4308]
Length = 184
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 110/190 (57%), Gaps = 39/190 (20%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFY+KIGACRHGDRCSR H KP++SQTIL+ N+Y NP K S + +
Sbjct: 16 VNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPK--------SKMNPSQ 67
Query: 61 MQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q H+D F+EDV+ E C KYGE+EE+ VCDN DHL+GNVY +F+ EEDA+ A + LN+
Sbjct: 68 LQNHFDAFYEDVWCEMC--KYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNS 125
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
R G C R GFCNF+H K S EL R L R +
Sbjct: 126 RCGEG-------------------------CVRGGFCNFIHRKDPSNELDRDL---RLST 157
Query: 180 SRRSRSRSRD 189
+ + R RD
Sbjct: 158 KKWLKERGRD 167
>gi|345315324|ref|XP_001512892.2| PREDICTED: hypothetical protein LOC100082198, partial
[Ornithorhynchus anatinus]
Length = 384
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 73/80 (91%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAE 130
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV++LNNRWF G+ V AE
Sbjct: 1 EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVSELNNRWFNGQAVQAE 60
Query: 131 LSPVTDFREACCRQYEMGEC 150
LSPVTDFRE+CCRQYEMG
Sbjct: 61 LSPVTDFRESCCRQYEMGTA 80
>gi|302502949|ref|XP_003013435.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|302652540|ref|XP_003018117.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
gi|291176999|gb|EFE32795.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|291181728|gb|EFE37472.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
Length = 180
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 99/154 (64%), Gaps = 11/154 (7%)
Query: 29 QTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVE-CEDKYGEIEEMN 87
+TILL NLY NPQ K+ + ++Q H+D F+ED + E C KYGEIEE+
Sbjct: 15 KTILLPNLYQNPQYDPKN--------KMNPSQLQNHFDAFYEDFWCEMC--KYGEIEEVV 64
Query: 88 VCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEM 147
VC+N DHL+GNVY +F+ E+ A+KA + LN+RW+ RP+Y ELSPVTDFREACCR
Sbjct: 65 VCENNNDHLIGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSG 124
Query: 148 GECTRSGFCNFMHLKPISRELRRYLYSRRKRSSR 181
C R GFCNF+H K S EL R L K+ R
Sbjct: 125 EGCVRGGFCNFIHRKEPSEELDRELELSTKKWLR 158
>gi|114676797|ref|XP_512599.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 4 [Pan
troglodytes]
gi|410220668|gb|JAA07553.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410247510|gb|JAA11722.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410287276|gb|JAA22238.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410329231|gb|JAA33562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
Length = 202
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 84/145 (57%), Gaps = 41/145 (28%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIG CRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGVCRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQY 145
WF G+ V+ + V C +
Sbjct: 95 WFNGQAVHGNVPEVASATSCICGPF 119
>gi|367000677|ref|XP_003685074.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
gi|357523371|emb|CCE62640.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
Length = 229
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 114/191 (59%), Gaps = 22/191 (11%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNS-AKSADGSHLISNVTDEEM 61
C FY+K+G CRHG++CS+ H P S TI+LLNL P+N+ +++ + ++ +D+
Sbjct: 20 CLFYYKVGVCRHGNKCSKSHTSPNRSHTIVLLNLVDFPRNADVTTSNTATTTTDESDKST 79
Query: 62 QE-------------------HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYI 102
QE YD+ +ED+++E KYG I EM +CDN DHL GNVY+
Sbjct: 80 QETKPNKPTTKNKSTPPIDDKEYDSIYEDLYIELA-KYGRIMEMYICDNGNDHLRGNVYV 138
Query: 103 KFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY-EMGECTRSGFCNFMHL 161
++ E++A A N+LN RWF G+P+Y +L+ + DF EA CR+ E C R CNFMH+
Sbjct: 139 RYSSEQNARDANNELNTRWFNGKPIYCDLTHIHDFGEAICRKPEEKSGCERGDHCNFMHI 198
Query: 162 KPISRELRRYL 172
+ S +L+ L
Sbjct: 199 RKPSPQLQTDL 209
>gi|442752923|gb|JAA68621.1| Putative u2 snrnp splicing factor small subunit [Ixodes ricinus]
Length = 116
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 75/79 (94%), Gaps = 1/79 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSRIHNKPTFSQT+LL NLY NPQNSA++ADGSHL +N+T+EE
Sbjct: 16 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQTADGSHL-ANMTEEE 74
Query: 61 MQEHYDNFFEDVFVECEDK 79
MQEH+DNFFEDVFVE EDK
Sbjct: 75 MQEHFDNFFEDVFVELEDK 93
>gi|397490403|ref|XP_003816194.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Pan
paniscus]
Length = 202
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 84/145 (57%), Gaps = 41/145 (28%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIG CRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGVCRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQY 145
WF G+ V+ + V C +
Sbjct: 95 WFNGQAVHGNVPEVASATSCICGPF 119
>gi|290993180|ref|XP_002679211.1| predicted protein [Naegleria gruberi]
gi|284092827|gb|EFC46467.1| predicted protein [Naegleria gruberi]
Length = 189
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 113/185 (61%), Gaps = 5/185 (2%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEM 61
C+FY+KIGACR GDRCS +H KP +SQTI++ ++Y NP+ A D + ++ + E +
Sbjct: 6 TCTFYWKIGACRLGDRCSHLHQKPAYSQTIMIRHMYPNPK-GAHFVDENGILRPFSQEFI 64
Query: 62 QEHYDNFFEDVFVECEDKYG-EIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+E ++NF+ D+F E E K G +IE++ +CDN +H+ GNVYI DA+K L +
Sbjct: 65 KEWFENFYADIFKELETKNGIKIEDLYICDNTCEHMFGNVYISLASIPDAQKCYELLKGK 124
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMG---ECTRSGFCNFMHLKPISRELRRYLYSRRK 177
+ GR + E SPV DF EA C+ ++ G C + CN +H+ S EL ++L+ R
Sbjct: 125 YHAGRLLTPEYSPVLDFSEAKCKLFDRGGEEHCPKGANCNNLHVLRPSEELAKHLFGERY 184
Query: 178 RSSRR 182
S ++
Sbjct: 185 ESYKQ 189
>gi|94536807|ref|NP_659424.2| splicing factor U2AF 26 kDa subunit isoform 2 [Homo sapiens]
gi|261861058|dbj|BAI47051.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 84/145 (57%), Gaps = 41/145 (28%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIG CRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGVCRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV +L+NR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQY 145
WF G+ V+ + V C +
Sbjct: 95 WFNGQAVHGNVPEVASATSCICGPF 119
>gi|145324040|ref|NP_001077609.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|332192738|gb|AEE30859.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 246
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
++QEH+++FFED+F E K+GEIE +N+CDNL DH++GNVY++F+ E+ A A+ L
Sbjct: 23 KIQEHFEDFFEDLFEEL-GKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQG 81
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
R++ GRP+ A+ SPVTDFREA CRQYE C R G+CNFMH+K +SRELRR L+
Sbjct: 82 RFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLF 135
>gi|441627326|ref|XP_004089246.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Nomascus
leucogenys]
Length = 202
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 85/145 (58%), Gaps = 41/145 (28%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VN SFYFKIGACRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNRSFYFKIGACRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV +L+NR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELSNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQY 145
WF G+ V+ + V C +
Sbjct: 95 WFNGQAVHGNVPEVASATSCICDPF 119
>gi|18088983|gb|AAH21186.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Homo sapiens]
gi|123983214|gb|ABM83348.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
gi|123997921|gb|ABM86562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 84/145 (57%), Gaps = 41/145 (28%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIG CRHGDRCSR+HNKPTFSQ
Sbjct: 16 VNCSFYFKIGVCRHGDRCSRLHNKPTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDH+VGNVY+KFRREED E+AV +L+NR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHVVGNVYVKFRREEDGERAVAELSNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQY 145
WF G+ V+ + V C +
Sbjct: 95 WFNGQAVHGNVPEVASATSCICGPF 119
>gi|302307163|ref|NP_983740.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|299788867|gb|AAS51564.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|374106953|gb|AEY95861.1| FADL355Wp [Ashbya gossypii FDAG1]
Length = 192
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 105/171 (61%), Gaps = 13/171 (7%)
Query: 9 IGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNF 68
IGACRHGD+CS+ HN P S TI++ N+Y+ P++ + E +++F
Sbjct: 2 IGACRHGDKCSKRHNSPINSYTIVIYNMYVPPRDYKDL------------HALTEDFESF 49
Query: 69 FEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVY 128
+EDVF+E ++GE++E+ VC+N DHL GNVYI++ + A+ A + L RW+G RP+Y
Sbjct: 50 YEDVFLEAA-RFGEVQELIVCENKTDHLNGNVYIRYSTIDAAKAARDALITRWYGERPLY 108
Query: 129 AELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
+LS VTDFREA C+ YE G C R CNF+H + I + L + +S
Sbjct: 109 CDLSHVTDFREAVCKSYEEGTCDRGEQCNFIHRRIIGYHIANGLMLSQWKS 159
>gi|426388320|ref|XP_004060589.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 202
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 83/145 (57%), Gaps = 41/145 (28%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNK TFSQ
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKSTFSQ------------------------------- 44
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+VF E ++KYGEIEEMNVCDNLGDHLVGNVY+KFRREED + AV +LNNR
Sbjct: 45 ----------EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGQWAVAELNNR 94
Query: 121 WFGGRPVYAELSPVTDFREACCRQY 145
WF G+ V+ + V C +
Sbjct: 95 WFNGQAVHGNVPEVASATSCICSPF 119
>gi|167396211|ref|XP_001741956.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165893246|gb|EDR21570.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 278
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 104/167 (62%), Gaps = 5/167 (2%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F++KIGACRHGD C++ H KP SQT+L +Y NP+ + DG L + ++++
Sbjct: 21 CEFFYKIGACRHGDACNKTHIKPESSQTLLFTRMYQNPK--KRIDDGEALERD--EKKIM 76
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
++ F+EDVF E E+ YGEI + VC N DH++GNVY+K+ EE A A L R++
Sbjct: 77 REFNEFYEDVFRELEN-YGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAAKKALTGRYY 135
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 169
+ + VT+F+EA CRQ ++G CTR G CNF+H+ R L+
Sbjct: 136 AKKILAPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLK 182
>gi|67482135|ref|XP_656417.1| U2 snRNP auxiliary factor small subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473613|gb|EAL51031.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708944|gb|EMD48310.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 279
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 104/167 (62%), Gaps = 5/167 (2%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F++KIGACRHGD C++ H KP SQT+L +Y NP+ + DG L + ++++
Sbjct: 22 CEFFYKIGACRHGDACNKTHIKPESSQTLLFTRMYQNPK--KRIDDGEALERD--EKKIM 77
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
++ F+EDVF E E+ YGEI + VC N DH++GNVY+K+ EE A A L R++
Sbjct: 78 REFNEFYEDVFRELEN-YGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAAKKALTGRYY 136
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 169
+ + VT+F+EA CRQ ++G CTR G CNF+H+ R L+
Sbjct: 137 AKKILTPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLK 183
>gi|367009756|ref|XP_003679379.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
gi|359747037|emb|CCE90168.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
Length = 190
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 22/183 (12%)
Query: 5 FYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEH 64
FY KIGACRHGD+CS+ H +P S TI+L N+ P + Q
Sbjct: 27 FYCKIGACRHGDKCSKKHIRPVRSNTIVLYNMLHIPASGLD----------------QSS 70
Query: 65 YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGG 124
+++F+EDV++E ++G + M VC+N DHL GNVY+ F +A++A++D N RW+
Sbjct: 71 FEDFYEDVYIEAC-RFGAVRSMVVCENGNDHLKGNVYLHFEHPNEAQRAMDDFNTRWYDE 129
Query: 125 RPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSR 184
RP+Y +L+ + DFR+A CR+++ C R CNFMH++ S+ L+ L S+ S+
Sbjct: 130 RPIYCDLTHIVDFRDAICRRHDQQACERGDECNFMHIRRPSQGLKIDL-----ERSQTSK 184
Query: 185 SRS 187
SRS
Sbjct: 185 SRS 187
>gi|407038759|gb|EKE39293.1| zinc finger c-x8-c-x5-c-x3-h type domain containing protein
[Entamoeba nuttalli P19]
Length = 279
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 104/167 (62%), Gaps = 5/167 (2%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F++KIGACRHGD C++ H KP SQT+L +Y NP+ + DG L + ++++
Sbjct: 22 CEFFYKIGACRHGDACNKTHIKPESSQTLLFTRMYQNPK--KRIDDGEALERD--EKKIM 77
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
++ F+EDVF E E+ YGEI + VC N DH++GNVY+K+ EE A A L R++
Sbjct: 78 REFNEFYEDVFRELEN-YGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAAKKALTGRYY 136
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 169
+ + VT+F+EA CRQ ++G CTR G CNF+H+ R L+
Sbjct: 137 AKKILTPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLK 183
>gi|326477662|gb|EGE01672.1| splicing factor U2AF 35 kDa subunit [Trichophyton equinum CBS
127.97]
Length = 169
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 88/132 (66%), Gaps = 3/132 (2%)
Query: 42 NSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNV 100
S+ S + + + ++Q H+D F+ED + E C KYGEIEE+ VC+N DHL+GNV
Sbjct: 9 TSSPSTRNTIPKNKMNPSQLQNHFDAFYEDFWCEMC--KYGEIEEVVVCENNNDHLIGNV 66
Query: 101 YIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 160
Y +F+ E+ A+KA + LN+RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H
Sbjct: 67 YARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIH 126
Query: 161 LKPISRELRRYL 172
K S EL R L
Sbjct: 127 RKEPSEELDREL 138
>gi|401414385|ref|XP_003871690.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487909|emb|CBZ23153.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 210
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 32/207 (15%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE-- 60
C+F+ K+GACRHGD+C+++H +P S T+L +Y NP H I+++ D E
Sbjct: 8 CAFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPNP----------HAIAHIKDREWT 57
Query: 61 -------MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 113
+++H+++F+++V+ + +G I E+ V NLGDHL+GNVYI+F + A +
Sbjct: 58 FELDKKYLKKHFEHFYKEVWRTFME-FGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRI 116
Query: 114 VNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL----- 168
V +L + V ELSPVT+F EACC++ C R CN++H+ +SR L
Sbjct: 117 VKELRGKKLNDVIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKLE 176
Query: 169 ---RRYLYSRRKR----SSRRSRSRSR 188
+Y + KR S R RSRSR
Sbjct: 177 KEQSKYWKKKEKRHEHDSGDRKRSRSR 203
>gi|225554163|gb|EEH02527.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
Length = 147
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 81/114 (71%), Gaps = 3/114 (2%)
Query: 60 EMQEHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
++Q H+D F+ED + E C KYGE+EE+ VCDN DHL+GNVY +F+ E+ A++A + LN
Sbjct: 5 QLQNHFDAFYEDFWCEMC--KYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDALN 62
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
+RW+ RP+Y ELSPVTDFREACCR C R GFCN +H K S EL R L
Sbjct: 63 SRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNLIHRKEPSPELEREL 116
>gi|154331585|ref|XP_001561610.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134058929|emb|CAM36756.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 210
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE-- 60
C F+ ++GACRHGD+C+++H +P S T+L +Y NP H I ++ D E
Sbjct: 8 CVFFSRMGACRHGDQCTKLHYRPDTSPTVLFPMMYPNP----------HAIVHIKDREWN 57
Query: 61 -------MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 113
+++H+++F+++V+ + +G I E+ V NLGDHL+GNVYI+F + A +
Sbjct: 58 FELDKKYLKKHFEHFYKEVWRTFME-FGRIAELRVVSNLGDHLLGNVYIRFEDPQVASRI 116
Query: 114 VNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
VN+L + V ELSPVT+F EACC++ C R CN++H+ +SR L L
Sbjct: 117 VNELRGKKLNAVIVLPELSPVTNFAEACCKEDLESRCQRGEQCNYLHIMKVSRRLLEKLE 176
Query: 174 SRRKRSSRRSRSR 186
+ + ++ R
Sbjct: 177 KEQSKHWKKREKR 189
>gi|71399405|ref|XP_802775.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|71657119|ref|XP_817079.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|70864869|gb|EAN81329.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
gi|70882249|gb|EAN95228.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 28/205 (13%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ K+GACRHGD C+++H +PT S T+L +Y NP I ++ D +
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMA----------IEHIQDRQWD 55
Query: 63 EHYDN-----FFEDVFVECEDKY---GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 114
H+D FE + E + G I E+ V NLGDHL+GNVYI+F DA
Sbjct: 56 FHFDRKYLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIA 115
Query: 115 NDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-- 172
+L + + ELSPVT+F +ACC++ G+C R CN++H+ +SR+L L
Sbjct: 116 RELKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEK 175
Query: 173 ----YSRRK----RSSRRSRSRSRD 189
Y ++K R S R R RS+D
Sbjct: 176 EQAKYWKKKEKHSRGSDRKRERSKD 200
>gi|156838866|ref|XP_001643131.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113726|gb|EDO15273.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 190
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 107/171 (62%), Gaps = 17/171 (9%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C FY+K+G CRHG++CS+ H P S++I++LN+ A +DG+ + S+V
Sbjct: 22 CHFYYKVGVCRHGNKCSKKHIPPANSRSIVVLNMI------AFQSDGTRM-SDVD----- 69
Query: 63 EHYDNFFEDVFVE-CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
+D ++EDVF+E C K+G+I+ + +N DHL GNVY + A++A + LN RW
Sbjct: 70 --FDGYYEDVFIELC--KFGKIKSFLITENGNDHLRGNVYALYDNVRSAKEARDSLNTRW 125
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
+ +P+Y++L+ + DF +A CR+Y++G C R CNFMH++ S L+ L
Sbjct: 126 YNEKPLYSDLTHIVDFNDAICRKYDVGSCDRGNECNFMHVRRPSPSLKSDL 176
>gi|407849824|gb|EKG04420.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 28/205 (13%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ K+GACRHGD C+++H +PT S T+L +Y NP I ++ D +
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMA----------IEHIQDRQWD 55
Query: 63 EHYDN-----FFEDVFVECEDKY---GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 114
H+D FE + E + G I E+ V NLGDHL+GNVYI+F DA
Sbjct: 56 FHFDRKYLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIA 115
Query: 115 NDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-- 172
+L + + ELSPVT+F +ACC++ G+C R CN++H+ +SR+L L
Sbjct: 116 RELKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEK 175
Query: 173 ----YSRRK----RSSRRSRSRSRD 189
Y ++K R S R R RS+D
Sbjct: 176 EQAKYWKKKEKHSRVSDRKRERSKD 200
>gi|342184023|emb|CCC93504.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 234
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 109/206 (52%), Gaps = 29/206 (14%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ K+GACRHGD C++IH +PT S T+L +Y NP I ++ D E
Sbjct: 6 CIFFSKMGACRHGDNCTKIHVRPTSSPTVLFPLMYPNPA----------AIEHIQDREWD 55
Query: 63 EHYD-----NFFEDVFVECEDKY---GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 114
H+D FE + E + G I E+ V NLGDHL+GNVYI+F +A + V
Sbjct: 56 FHFDRRYLRQHFERFYKETWRTFMELGHIAELRVVSNLGDHLLGNVYIRFEDSHEALRVV 115
Query: 115 NDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-- 172
+L + + ELSPVT+F +ACC++ G C R CN++H+ +SR+L L
Sbjct: 116 RELKAKKLNNIVLLPELSPVTNFADACCKEDLEGNCERGSQCNYLHIMKVSRKLMEKLEK 175
Query: 173 ----YSRRK-----RSSRRSRSRSRD 189
Y ++K +S R R RS+D
Sbjct: 176 EQAKYRKKKDKHSGSTSSRKRERSKD 201
>gi|21616732|gb|AAM66350.1|AF499017_1 U2 splicing auxiliary factor [Trypanosoma cruzi]
Length = 233
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 28/205 (13%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ K+GACRHGD C+++H + T S T+L L +Y NP I ++ D +
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRSTSSPTVLFLMMYPNPMA----------IEHIQDRQWD 55
Query: 63 EHYDN-----FFEDVFVECEDKY---GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 114
H+D FE + E + G I E+ V NLGDHL+GNVYI+F DA
Sbjct: 56 FHFDRKYLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIA 115
Query: 115 NDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-- 172
+L + + ELSPVT+F +ACC++ G+C R CN++H+ +SR+L L
Sbjct: 116 RELKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIVKVSRKLMEKLEK 175
Query: 173 ----YSRRK----RSSRRSRSRSRD 189
Y ++K R S R R RS+D
Sbjct: 176 EQAKYWKKKEKHSRGSDRKRERSKD 200
>gi|56202175|dbj|BAD73653.1| U2 auxiliary factor small chain-like [Oryza sativa Japonica Group]
Length = 258
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 11 ACRHGDRCSR--IHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNF 68
AC G + + +PT S T++ N+Y P D + +MQEH+++F
Sbjct: 19 ACLRGGKTGSGMLSVRPTISPTVVFANMYQRPDMITPGVDAQG--QPIDPRQMQEHFEDF 76
Query: 69 FEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVY 128
+ED+F E K+GEIE +NVCDNL DH++GNVY++FR E+ A A L R++ GRP+
Sbjct: 77 YEDIFEEL-SKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGRFYSGRPII 135
Query: 129 AELSPVTDFREACCRQYEMGECTR 152
+ SPVTDFREA CRQ +G R
Sbjct: 136 VDFSPVTDFREATCRQLGLGRDLR 159
>gi|389592512|ref|XP_003721697.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
gi|321438230|emb|CBZ11982.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
Length = 210
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE-- 60
C F+ K+GACRHGD+C+++H +P S T+L +Y NP H I ++ D E
Sbjct: 8 CVFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPNP----------HAIEHIKDREWN 57
Query: 61 -------MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 113
+++H+++F+++V+ + +G I E+ V NLGDHL+GNVYI+F + A +
Sbjct: 58 FELDKKYLKKHFEHFYKEVWRTFME-FGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRI 116
Query: 114 VNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
V +L + V ELSPVT+F EACC++ C R CN++H+ +SR L L
Sbjct: 117 VKELRGKKLNDIIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKLE 176
Query: 174 SRRKRSSRRSRSR 186
+ + ++ R
Sbjct: 177 KEQSKYWKKKERR 189
>gi|146075783|ref|XP_001462772.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|398009570|ref|XP_003857984.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
gi|134066852|emb|CAM59993.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|322496188|emb|CBZ31259.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
Length = 210
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE-- 60
C F+ K+GACRHGD+C+++H +P S T+L +Y NP H + ++ D E
Sbjct: 8 CVFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPNP----------HAVEHIKDREWN 57
Query: 61 -------MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 113
+++H+++F+++V+ + +G I E+ V NLGDHL+GNVYI+F + A +
Sbjct: 58 FELDRKYLKKHFEHFYKEVWRTFME-FGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRI 116
Query: 114 VNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
V +L + V ELSPVT+F EACC++ C R CN++H+ +SR L L
Sbjct: 117 VKELRGKKLNDIIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKLE 176
Query: 174 SRRKRSSRRSRSR 186
+ + ++ R
Sbjct: 177 KEQTKYWKKKEKR 189
>gi|407410372|gb|EKF32829.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
gi|407410375|gb|EKF32830.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
Length = 233
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 28/205 (13%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ K+GACRHGD C+++H +PT S T+L +Y NP I ++ D + +
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMA----------IEHIQDRQWE 55
Query: 63 EHYDN-----FFEDVFVECEDKY---GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 114
H+D FE + E + G I E+ V NLGDHL+GNVYI+F +A
Sbjct: 56 FHFDRKYLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAAEASHIA 115
Query: 115 NDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL-- 172
+L + + ELSPVT+F +ACC++ G+C R CN++H+ +SR+L L
Sbjct: 116 RELKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEK 175
Query: 173 -----YSRRKRSSR---RSRSRSRD 189
+ ++++ SR R R RS+D
Sbjct: 176 EQAKYWKKKEKHSRGGDRKRERSKD 200
>gi|71747034|ref|XP_822572.1| U2 splicing auxiliary factor [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832240|gb|EAN77744.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332325|emb|CBH15319.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei
gambiense DAL972]
Length = 247
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 102/179 (56%), Gaps = 20/179 (11%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE-- 60
C F+ K+GACRHGD C+++H +PT S T+L +Y NP I ++ D E
Sbjct: 6 CIFFSKMGACRHGDGCTKVHVRPTTSPTVLFPFMYPNPAA----------IEHIQDREWN 55
Query: 61 -------MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 113
++ H+++F+++ + + G I E+ V NLGDHL+GNVYI+F DA +
Sbjct: 56 FHFERKYLRRHFEHFYKETWRTFME-LGRIAELRVVSNLGDHLLGNVYIRFEDSHDASRI 114
Query: 114 VNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
V +L + + ELSPVT+F EACC++ G+C R CN++H+ +SR+L L
Sbjct: 115 VRELKAKKLNDIVLLPELSPVTNFAEACCKEDLEGKCERGPQCNYLHIMKVSRKLMEKL 173
>gi|254567930|ref|XP_002491075.1| hypothetical protein [Komagataella pastoris GS115]
gi|238030872|emb|CAY68795.1| Hypothetical protein PAS_chr2-1_0187 [Komagataella pastoris GS115]
Length = 239
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 102/206 (49%), Gaps = 47/206 (22%)
Query: 4 SFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYI-----------------NPQNSAKS 46
+FY +IGACRHG++C + H PT S ++L N + + Q S
Sbjct: 12 AFYRRIGACRHGNKCVKEHIHPTSSYCVVLRNFFDFSLLKVANEGTEVADEGDKQKQQLS 71
Query: 47 ADGSHLISNVTDEEMQ------------------------------EHYDNFFEDVFVEC 76
D + +N T++ Q E ++ +D+FVE
Sbjct: 72 GDKKNEQNNGTEKVNQDTSTKDSTSPQNSEPERNDPYTKLKEISESERFNKLLQDIFVEL 131
Query: 77 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTD 136
YG IE++ +C+N HL GNVYIKF +E A +LNNRW+ GRP+Y+ELSPV
Sbjct: 132 SLNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWYNGRPIYSELSPVRS 191
Query: 137 FREACCRQYEMGECTRSGFCNFMHLK 162
F EA CR+++ G C R CN+MH+K
Sbjct: 192 FEEATCRKHDFGRCERGDMCNYMHIK 217
>gi|328352397|emb|CCA38796.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 , RNA-binding motif and
serine/arginine rich protein 2 [Komagataella pastoris
CBS 7435]
Length = 243
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 102/206 (49%), Gaps = 47/206 (22%)
Query: 4 SFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYI-----------------NPQNSAKS 46
+FY +IGACRHG++C + H PT S ++L N + + Q S
Sbjct: 16 AFYRRIGACRHGNKCVKEHIHPTSSYCVVLRNFFDFSLLKVANEGTEVADEGDKQKQQLS 75
Query: 47 ADGSHLISNVTDEEMQ------------------------------EHYDNFFEDVFVEC 76
D + +N T++ Q E ++ +D+FVE
Sbjct: 76 GDKKNEQNNGTEKVNQDTSTKDSTSPQNSEPERNDPYTKLKEISESERFNKLLQDIFVEL 135
Query: 77 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTD 136
YG IE++ +C+N HL GNVYIKF +E A +LNNRW+ GRP+Y+ELSPV
Sbjct: 136 SLNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWYNGRPIYSELSPVRS 195
Query: 137 FREACCRQYEMGECTRSGFCNFMHLK 162
F EA CR+++ G C R CN+MH+K
Sbjct: 196 FEEATCRKHDFGRCERGDMCNYMHIK 221
>gi|406603045|emb|CCH45380.1| Splicing factor U2af small subunit A [Wickerhamomyces ciferrii]
Length = 160
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 94/153 (61%), Gaps = 9/153 (5%)
Query: 33 LLNLYINP-------QNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEE 85
+ NLY NP N+ + + L + D++ +D+F++D+F+E G+I+E
Sbjct: 1 MTNLYQNPDVSRDHNNNTNSKTESNELPTIPKDQQEVIKFDDFYKDIFIESS-LIGQIDE 59
Query: 86 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 145
+ VC+N DHL GNVY+KF EE A KA + + RW+ +P+Y ELSPV DFR + CRQ+
Sbjct: 60 LTVCENHNDHLNGNVYVKFNSEEAATKARDLFSTRWYNSKPIYCELSPVVDFRGSTCRQH 119
Query: 146 EMGECTRSGFCNFMHLKPISRELRRYL-YSRRK 177
+ C R G CNFMH+K SR+L + L S+RK
Sbjct: 120 DSKTCDRGGMCNFMHVKRPSRDLLKTLKLSQRK 152
>gi|358420073|ref|XP_003584415.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 686
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +N+ ++
Sbjct: 404 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCGRDDYDPDANLEYSE 463
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 464 EEIYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 522
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT + A C +E+ +C R +CNF+H+
Sbjct: 523 GRWYAGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCNFLHV 565
>gi|340056926|emb|CCC51265.1| putative U2 splicing auxiliary factor [Trypanosoma vivax Y486]
Length = 239
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 102/178 (57%), Gaps = 26/178 (14%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE-- 60
C F+ K+GACRHGD C+++H +P+ S T+L +Y NP I ++ D +
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPSSSPTVLFPLMYPNPMA----------IEHIHDRQWD 55
Query: 61 -------MQEHYDNFFEDV---FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
++ H+++F+++ F+E G I E+ V NLGDHL+GNVYI+F DA
Sbjct: 56 FCFERKYLRRHFEHFYKETWRTFME----LGRIAELRVVSNLGDHLLGNVYIRFEESSDA 111
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
+ V +L + + E+SPVT+F +ACC++ G+C R CN++H+ +SR+L
Sbjct: 112 ARIVRELKAKKLNEIILLPEISPVTNFADACCKEDLEGKCERGTQCNYLHIMKVSRKL 169
>gi|327268246|ref|XP_003218909.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Anolis carolinensis]
Length = 487
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT SQT+L+ +++ D +++ ++
Sbjct: 199 ANCPFYIKTGACRFGDRCSRKHNYPTSSQTLLIRGMFVTFGMEQCKRDDYDTDASLEYSE 258
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F+EDV E ++ G++ + V N HL GNVY++++ E++ ++A+ N
Sbjct: 259 EEIYQQFLDFYEDVLPEFKN-VGKVVQFKVSCNFEPHLRGNVYVQYQSEQECQEALTLFN 317
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E +C R CNF+H+
Sbjct: 318 GRWYAGRQLQCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 360
>gi|257219672|gb|ACV51810.1| ZRSR2Y, partial [Bos taurus]
Length = 445
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +N+ ++
Sbjct: 163 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCGRDDYDPDANLEYSE 222
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 223 EEIYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 281
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT + A C +E+ +C R +CNF+H+
Sbjct: 282 GRWYAGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCNFLHV 324
>gi|241948859|ref|XP_002417152.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
gi|223640490|emb|CAX44743.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
Length = 374
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+ Q +D FF+D+FV K+G+I ++ VC+N +HL GNVY+ F EDA A LN
Sbjct: 209 QTQHDFDQFFQDIFVHI-SKFGQISDIAVCENENNHLAGNVYVMFESPEDAYNANLQLNQ 267
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYE-MGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
W+ GRPVY+ELSPV+DF EACC Y C R CN+MH++ SR+L + LY + +
Sbjct: 268 EWYNGRPVYSELSPVSDFNEACCEAYSYYHNCERGAMCNYMHIRLPSRDLEQSLYESQTK 327
Query: 179 S 179
S
Sbjct: 328 S 328
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ 41
V CSFY +IGACRHG+ CS+ H KP S+TILL NLY NP+
Sbjct: 20 VLCSFYSRIGACRHGENCSKKHLKPISSRTILLANLYQNPK 60
>gi|449270924|gb|EMC81567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Columba livia]
Length = 453
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 14/202 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K G+CR GDRCSR HN PT S+T+L+ ++I D +++ +D
Sbjct: 157 ANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMFITFGMEQCRRDDYDTDASLEYSD 216
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + F+EDV E ++ G++ + V N HL GNVY++++ E+D + A+ +
Sbjct: 217 EETYQQFLEFYEDVLPEFQN-VGKVVQFKVSCNYEPHLRGNVYVQYQSEKDCQAALALFS 275
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH--------LKPISRELR- 169
RW+ GR ++ E PVT ++ A C +E +C R CNF+H L SR++R
Sbjct: 276 GRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHVFKNPSNDLWDASRDIRI 335
Query: 170 --RYLYSRRKRSSRRSRSRSRD 189
K S RR+RS RD
Sbjct: 336 SPERTNQLSKNSERRNRSSHRD 357
>gi|402872263|ref|XP_003900043.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Papio
anubis]
Length = 500
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 196 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 255
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 256 EEIYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 314
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 315 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 357
>gi|402872265|ref|XP_003900044.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Papio
anubis]
Length = 485
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 181 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 240
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 241 EEIYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 299
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 300 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 342
>gi|2833358|sp|Q29350.3|U2AF1_PIG RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName:
Full=U2 auxiliary factor 35 kDa subunit; AltName:
Full=U2 snRNP auxiliary factor small subunit
Length = 82
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 64/69 (92%), Gaps = 2/69 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTI+LLNLY NPQN+A++ADGSH +V+D E
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSH--CHVSDVE 73
Query: 61 MQEHYDNFF 69
+QEHYDNFF
Sbjct: 74 VQEHYDNFF 82
>gi|355758818|gb|EHH61525.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 1 [Macaca
fascicularis]
Length = 472
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 168 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 227
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 228 EEIYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 286
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 287 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|355691520|gb|EHH26705.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
mulatta]
Length = 472
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 168 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 227
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 228 EEIYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 286
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 287 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|355757207|gb|EHH60732.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
fascicularis]
Length = 467
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 157 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 216
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 217 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 275
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 276 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 318
>gi|397512930|ref|XP_003826786.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Pan
paniscus]
Length = 504
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 200 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEFSE 259
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 260 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 318
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 319 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 361
>gi|4827046|ref|NP_005080.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Homo sapiens]
gi|2833266|sp|Q15696.2|U2AFM_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=Renal carcinoma antigen
NY-REN-20; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|1808582|dbj|BAA08533.1| U2AF1-RS2 [Homo sapiens]
gi|109731267|gb|AAI13455.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|109731281|gb|AAI13481.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|119619306|gb|EAW98900.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_a
[Homo sapiens]
gi|313883686|gb|ADR83329.1| zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [synthetic construct]
Length = 482
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|332860347|ref|XP_520951.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Pan
troglodytes]
Length = 478
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|297709488|ref|XP_002831462.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pongo abelii]
Length = 478
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|127797587|gb|AAH50451.2| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
Length = 482
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|426395275|ref|XP_004063900.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 461
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 157 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 216
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 217 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 275
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 276 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 318
>gi|1125020|dbj|BAA08532.1| U2AF1-RS1 [Homo sapiens]
Length = 479
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 175 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 234
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 235 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 293
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 294 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 336
>gi|2833265|sp|Q15695.2|U2AFL_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 1
gi|1293653|gb|AAA98669.1| U2AFBPL [Homo sapiens]
Length = 479
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 175 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 234
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 235 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 293
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 294 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 336
>gi|332223959|ref|XP_003261135.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Nomascus
leucogenys]
Length = 482
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|296234985|ref|XP_002762699.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Callithrix jacchus]
Length = 474
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|345327120|ref|XP_001515642.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ornithorhynchus
anatinus]
Length = 466
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K G+CR GDRCSR HN PT S T+L+ +++I D +++ ++
Sbjct: 169 ANCPFYIKTGSCRFGDRCSRKHNYPTLSPTLLIRSMFITFGMEQCRRDDYDTDASLEYSE 228
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V N HL GNVY++++ EE+ ++A + N
Sbjct: 229 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQEAFSLFN 287
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E +C R CNF+H+
Sbjct: 288 GRWYAGRQLQCEFCPVTRWKMAICGLFERQKCPRGKHCNFLHV 330
>gi|397512928|ref|XP_003826785.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Pan
paniscus]
gi|397512932|ref|XP_003826787.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 3 [Pan
paniscus]
gi|397512934|ref|XP_003826788.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 4 [Pan
paniscus]
gi|410039576|ref|XP_003950650.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pan troglodytes]
Length = 489
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 185 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEFSE 244
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 245 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 303
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 304 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 346
>gi|119619307|gb|EAW98901.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_b
[Homo sapiens]
Length = 446
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 167 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 226
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 227 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 285
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 286 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 328
>gi|332860349|ref|XP_003317416.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Pan
troglodytes]
Length = 482
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|297303397|ref|XP_001116975.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Macaca mulatta]
Length = 479
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 169 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 228
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 229 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 287
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 288 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|402909571|ref|XP_003917490.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Papio anubis]
Length = 480
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|332223957|ref|XP_003261134.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Nomascus
leucogenys]
Length = 478
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|449483114|ref|XP_002194245.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Taeniopygia guttata]
Length = 644
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K G+CR GDRCSR HN PT S+T+L+ ++I D +++ +D
Sbjct: 342 ANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMFITFGMEQCRRDDYDTDASLEYSD 401
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + F+EDV E ++ G++ + V N HL GNVY++++ E+D + A+ +
Sbjct: 402 EETYQQFLEFYEDVLPEFQN-VGKVVQFKVSCNYEPHLRGNVYVQYQSEKDCQAALALFS 460
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR ++ E PVT ++ A C +E +C R CNF+H+
Sbjct: 461 GRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 503
>gi|326913598|ref|XP_003203123.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Meleagris gallopavo]
Length = 473
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K G+CR GDRCSR HN PT S+T+L+ ++I D +++ +D
Sbjct: 171 ANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMFITFGMEQCRRDDYDTDASLEYSD 230
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + F+EDV E ++ G++ + V N HL GNVY++++ E+D + A+ +
Sbjct: 231 EETYQQFLEFYEDVLPEFQN-VGKVVQFKVSCNYEPHLRGNVYVQYQTEKDCQAALALFS 289
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR ++ E PVT ++ A C +E +C R CNF+H+
Sbjct: 290 GRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 332
>gi|294875296|ref|XP_002767259.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239868814|gb|EEQ99976.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 235
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 40/164 (24%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIG CRHGD+CSR HN+P SQT+LL +Y NP + A+G + D
Sbjct: 16 VNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIALAEGQDVADEQAD-A 74
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
QEH++ F+E+VF+E + YG
Sbjct: 75 AQEHFEAFYEEVFLELAN-YG--------------------------------------T 95
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPI 164
++ GR + E SPVTDF EA CRQ++ +C+R GFCNF+H K +
Sbjct: 96 FYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 139
>gi|363728701|ref|XP_425572.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Gallus gallus]
Length = 473
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K G+CR GDRCSR HN PT S+T+L+ ++I D +++ +D
Sbjct: 171 ANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMFITFGMEQCRRDDYDTDASLEYSD 230
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + F+EDV E ++ G++ + V N HL GNVY++++ E+D + A+ +
Sbjct: 231 EETYQQFLEFYEDVLPEFQN-VGKVVQFKVSCNYEPHLRGNVYVQYQTEKDCQAALALFS 289
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR ++ E PVT ++ A C +E +C R CNF+H+
Sbjct: 290 GRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 332
>gi|395736068|ref|XP_002815836.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pongo abelii]
Length = 489
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 185 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 244
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 245 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 303
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 304 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 346
>gi|395526914|ref|XP_003765599.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Sarcophilus harrisii]
Length = 470
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K G+CR GDRCSR HN PT SQT+L+ +++I D +++ ++
Sbjct: 170 ANCPFYIKTGSCRFGDRCSRKHNYPTSSQTLLIRSMFITFGMEQCRRDDYDTDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V N HL GNVY++++ EE+ + A + N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAAFSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E SPVT ++ A C + +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCNFLHV 331
>gi|189069316|dbj|BAG36348.1| unnamed protein product [Homo sapiens]
Length = 479
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 175 ANCPFYSKTGACRFGDRCSRRHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 234
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 235 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 293
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 294 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 336
>gi|334346699|ref|XP_001380936.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Monodelphis
domestica]
Length = 466
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K G+CR GDRCSR HN PT SQT+L+ +++I D +++ ++
Sbjct: 169 ANCPFYIKTGSCRFGDRCSRKHNYPTSSQTLLIRSMFITFGMEQCRRDDYDTDASLEYSE 228
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V N HL GNVY++++ EE+ + A + N
Sbjct: 229 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAAFSLFN 287
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E SPVT ++ A C + +C R CNF+H+
Sbjct: 288 GRWYAGRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCNFLHV 330
>gi|119619308|gb|EAW98902.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_c
[Homo sapiens]
Length = 344
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 32 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 91
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 92 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 150
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 151 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 193
>gi|354498940|ref|XP_003511570.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cricetulus griseus]
Length = 537
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D S++ ++
Sbjct: 218 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSLEYSE 277
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+ DV E ++ G++ + V NL HL GNVY++++ EED + A + N
Sbjct: 278 EETYQQFLDFYHDVLPEFKN-VGKVVQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSLFN 336
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 337 GRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 379
>gi|397467387|ref|XP_003805402.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pan paniscus]
Length = 478
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A + N
Sbjct: 230 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAFSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|344244411|gb|EGW00515.1| Splicing factor U2AF 35 kDa subunit [Cricetulus griseus]
Length = 98
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNCS YFKIGACRHGDRCSR+HNKPTFSQTI LLN+Y NPQNS++ AD H V+D E
Sbjct: 16 VNCSLYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQYADSLHCA--VSDVE 73
Query: 61 MQEHYDNFFEDVFVECEDKYGEI 83
M+EHYD FFE+VF E E+ +
Sbjct: 74 MKEHYDEFFEEVFTEMEESTARL 96
>gi|121949800|ref|NP_033479.2| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 isoform 1 [Mus musculus]
gi|162319138|gb|AAI56405.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
gi|225000398|gb|AAI72696.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
Length = 541
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ ++ D S++ ++
Sbjct: 174 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSLEFSE 233
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F+ DV E + G++ + V NL HL GNVY++++ EED + A + N
Sbjct: 234 EEIYQQFLDFYYDVLPEFKS-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFN 292
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 GRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 335
>gi|293350806|ref|XP_001067753.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
gi|293362880|ref|XP_217612.5| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
Length = 541
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D S++ ++
Sbjct: 170 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+ DV E + G++ + V NL HL GNVY++++ EED + A + N
Sbjct: 230 EETYQQFLDFYYDVLPEFKS-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 331
>gi|348554507|ref|XP_003463067.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cavia porcellus]
Length = 490
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 169 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASLEYSE 228
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 229 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 287
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 288 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|2842648|sp|Q62377.1|U2AFM_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|927659|dbj|BAA08143.1| U2af1-rs2 [Mus musculus]
Length = 462
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ ++ D S++ ++
Sbjct: 174 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSLEFSE 233
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F+ DV E + G++ + V NL HL GNVY++++ EED + A + N
Sbjct: 234 EEIYQQFLDFYYDVLPEFKS-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFN 292
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 GRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 335
>gi|426257963|ref|XP_004023719.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2-like
[Ovis aries]
Length = 502
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 198 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 257
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 258 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 316
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 317 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 359
>gi|148708819|gb|EDL40766.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 2 [Mus musculus]
Length = 498
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ ++ D S++ ++
Sbjct: 131 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSLEFSE 190
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F+ DV E + G++ + V NL HL GNVY++++ EED + A + N
Sbjct: 191 EEIYQQFLDFYYDVLPEFKS-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFN 249
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 250 GRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 292
>gi|358420032|ref|XP_003584397.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
gi|359082042|ref|XP_003588252.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
Length = 477
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 173 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 232
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 233 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 291
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 292 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 334
>gi|343958430|dbj|BAK63070.1| signal recognition particle 19kDa [Pan troglodytes]
Length = 310
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 6 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEFSE 65
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 66 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 124
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 125 GRWHAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 167
>gi|351696721|gb|EHA99639.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Heterocephalus glaber]
Length = 511
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ +D
Sbjct: 190 ANCPFYSKTGACRFGDRCSRKHNFPTSSSTLLIRSMFTTFGMEQCRRDDYDPDASLEYSD 249
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ A++ N
Sbjct: 250 EETYQQFLDFYHDVVPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECHAALSLFN 308
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 309 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 351
>gi|431909774|gb|ELK12920.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 461
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 165 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASLEYSE 224
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E + G++ + V N+ HL GNVY++++ EE+ + A + N
Sbjct: 225 EETYQQFLDFYEDVLPEFRN-VGKVVQFKVSCNMEPHLRGNVYVQYQSEEECQAARSLFN 283
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 284 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 326
>gi|395837998|ref|XP_003791914.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Otolemur garnettii]
Length = 493
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 169 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 228
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A + N
Sbjct: 229 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQTEEECQTAFSLFN 287
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 288 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|332221469|ref|XP_003259883.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 5 [Nomascus
leucogenys]
Length = 507
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR G RCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 200 ANCPFYSKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 259
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 260 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 318
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 319 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 361
>gi|355731037|gb|AES10395.1| zinc finger , RNA-binding motif and serine/arginine rich 2 [Mustela
putorius furo]
Length = 463
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN P+ S T+L+ +++ D +++ ++
Sbjct: 169 ANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 228
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 229 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 287
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 288 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|281340363|gb|EFB15947.1| hypothetical protein PANDA_020065 [Ailuropoda melanoleuca]
Length = 398
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN P+ S T+L+ +++ D +++ ++
Sbjct: 103 ANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 162
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 163 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 221
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 222 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 264
>gi|194227695|ref|XP_001490095.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Equus caballus]
Length = 470
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN P S T+L+ +++ D +++ ++
Sbjct: 168 ANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFGMEQCRRDDYDPDASLEYSE 227
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 228 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQTALSLFN 286
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 287 GRWYAGRQLQCEFCPVTQWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|410988239|ref|XP_004000394.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Felis catus]
Length = 519
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN P+ S T+L+ +++ D +++ ++
Sbjct: 224 ANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 283
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 284 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 342
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 343 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 385
>gi|441598673|ref|XP_004087475.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
gi|441598677|ref|XP_004087476.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
Length = 492
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR G RCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 185 ANCPFYSKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 244
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 245 EETYQQFLDFYEDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 303
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 304 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 346
>gi|335305731|ref|XP_001926829.3| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Sus
scrofa]
Length = 485
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN P S T+L+ +++ D +++ ++
Sbjct: 177 ANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 236
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A+ N
Sbjct: 237 EETYQQFLDFYDDVLPEFKN-VGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALALFN 295
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 296 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 338
>gi|301788732|ref|XP_002929785.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ailuropoda
melanoleuca]
Length = 464
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN P+ S T+L+ +++ D +++ ++
Sbjct: 169 ANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 228
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 229 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 287
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 288 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|444707445|gb|ELW48720.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Tupaia chinensis]
Length = 612
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN P S T+L+ +++ D +++ ++
Sbjct: 299 ANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFGMEQCRRDDYDPDASLEYSE 358
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 359 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 417
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 418 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 460
>gi|291407124|ref|XP_002719965.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2
[Oryctolagus cuniculus]
Length = 498
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN P S T+L+ +++ D +++ ++
Sbjct: 173 ANCPFYNKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 232
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 233 EETYQQFLDFYDDVLPEFKN-VGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQTALSLFN 291
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 292 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 334
>gi|238879030|gb|EEQ42668.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 371
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
Q+ +D FF+D+FV K G+I ++ VC+N +HL GNVY+ F EDA A LN W
Sbjct: 208 QKDFDQFFQDIFVHIS-KLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEW 266
Query: 122 FGGRPVYAELSPVTDFREACCRQY-EMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
F G+PVY++LSPV DF +ACC +Y + +C R CN+MH++ S ++ LY + +S
Sbjct: 267 FNGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSSDIEESLYESQAKS 325
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP 40
V CSFY KIGACRHG++CS+ H KP S+TILL NLY NP
Sbjct: 20 VLCSFYSKIGACRHGEKCSKKHLKPISSRTILLANLYQNP 59
>gi|68490905|ref|XP_710740.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490926|ref|XP_710731.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431969|gb|EAK91483.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431979|gb|EAK91492.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 371
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
Q+ +D FF+D+FV K G+I ++ VC+N +HL GNVY+ F EDA A LN W
Sbjct: 208 QKDFDQFFQDIFVHIS-KLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEW 266
Query: 122 FGGRPVYAELSPVTDFREACCRQY-EMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
F G+PVY++LSPV DF +ACC +Y + +C R CN+MH++ S ++ LY + +S
Sbjct: 267 FNGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSSDIEESLYESQAKS 325
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP 40
V CSFY KIGACRHG++CS+ H KP S+TILL NLY NP
Sbjct: 20 VLCSFYSKIGACRHGEKCSKKHLKPISSRTILLANLYQNP 59
>gi|395821701|ref|XP_003784175.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 482
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN P S T+L+ +++ D + + ++
Sbjct: 165 ANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDAGLEYSE 224
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 225 EETYQQFLDFYDDVLPEFKN-VGKVIKFKVSCNLEPHLRGNVYVQYQSEEECQTALSVFN 283
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 284 GRWYAGRQLQCEFCPVTRWKMAICGLFEIKQCPRGRHCNFLHV 326
>gi|431899712|gb|ELK07664.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 449
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR G+RCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 153 ANCPFYNKTGACRFGNRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASLEYSE 212
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+EDV E + G++ + V NL HL GNVY++++ +E+ + A++ N
Sbjct: 213 EETYQQFLDFYEDVLPEFRN-VGKVVQFKVSCNLEPHLRGNVYVQYQSKEECQAALSLFN 271
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 272 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 314
>gi|301617734|ref|XP_002938300.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Xenopus (Silurana)
tropicalis]
Length = 529
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 93/163 (57%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVT--D 58
NC FY K GACR G+RCSR HN P+ SQT+L+ ++++ D +++ +
Sbjct: 159 ANCPFYLKTGACRFGERCSRKHNYPSSSQTLLIRSMFVTFGMEQCRRDDYDTDASLEYGE 218
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + F+ DV E ++ G++ + V N HL GNVY++++ EE+ KA N
Sbjct: 219 EEIYQQFLEFYADVVPEFKNA-GKVVQFKVSCNFEPHLRGNVYVQYQTEEECLKAFTQFN 277
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ R + E SPVT ++ A C +E +C R CNF+H+
Sbjct: 278 GRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV 320
>gi|395841461|ref|XP_003793555.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 491
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +++ ++
Sbjct: 169 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASLEYSE 228
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V N HL GNVY++++ EE+ + A + N
Sbjct: 229 EETYQQFLDFYDDVLPEFKN-VGKVIQFKVSCNWEPHLRGNVYVQYQTEEECQTAFSLFN 287
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 288 GRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|123474332|ref|XP_001320349.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903153|gb|EAY08126.1| hypothetical protein TVAG_302130 [Trichomonas vaginalis G3]
Length = 339
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Query: 14 HGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVF 73
HG+ CSR+H KP S T+LL N Y NP + LI + +E ++ ++D F+ DV+
Sbjct: 2 HGEICSRMHIKPQVSNTLLLANFYQNPYHFMSLLPPDTLI--IENETIRNNFDEFYLDVY 59
Query: 74 VECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 133
E +G I E V NL +HL+GNV + + E+A A N+L R++GGRP+ + SP
Sbjct: 60 EELR-TFGPISEFVVSGNLCEHLLGNVLVMYENLENALTAYNNLRGRYYGGRPIDVQFSP 118
Query: 134 VTDFREACCRQYEMGECTRSGFCNFMH 160
V +F A CRQ++ G+C + CNF+H
Sbjct: 119 VVNFNVAVCRQFKEGKCPHNEKCNFIH 145
>gi|193788564|ref|NP_001123327.1| zinc finger protein ZF(C3H)-13 [Ciona intestinalis]
gi|93003114|tpd|FAA00140.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 479
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYIN--------PQNSAKSADGSHLIS 54
C F+ ++GACR GD CS++H KPT S+T+LL +++ S D S L
Sbjct: 211 CYFFERVGACRFGDSCSKLHEKPTSSRTLLLPSMFNTFAFDIASRASRSNVHGDSSDLAL 270
Query: 55 NVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 114
+DE++ E ++ F++DVF E +K+G +E++ VC N HL GNVY+++ AE A
Sbjct: 271 EHSDEDLYEDFEVFYDDVFPEF-NKFGHVEQLKVCCNRDQHLRGNVYVQYATVSQAETAF 329
Query: 115 NDLNNRWFGGRPVYAELSPVTDFREACCRQYEMG-ECTRSGFCNFMHLKPISREL----- 168
LN R++GG+ + + + A C Y G C R G CNF+H+ R
Sbjct: 330 QSLNGRFYGGKLLQCMYVTILSWSSAICGLYCTGRPCPRGGHCNFLHVFADKRSKDRSGS 389
Query: 169 ----RRYLYSRRKRSSRRSRSRSR 188
R+ LY ++ S R SR R
Sbjct: 390 CTRGRKGLYKNKRLSFRISRPLPR 413
>gi|354479997|ref|XP_003502195.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Cricetulus griseus]
gi|344244263|gb|EGW00367.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Cricetulus griseus]
Length = 427
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYIN--PQNSAKSADGSHLISNVTD 58
+C FY K GACR G+RCSR H+ PT S T+L+ +++ + + S ++
Sbjct: 160 ASCPFYSKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDASLEYSE 219
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 220 EETYQQFLDFYHDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 278
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C YEM +C + CNF+H+
Sbjct: 279 GRWYAGRQLQCEFCPVTRWKIAICGLYEMQKCPKGKHCNFLHV 321
>gi|196002924|ref|XP_002111329.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
gi|190585228|gb|EDV25296.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
Length = 462
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 99/182 (54%), Gaps = 5/182 (2%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEE 60
C F+ K G CR GDRCSR+H P S+ +L+ N++ + S D +N+ ++ +
Sbjct: 147 CPFFNKTGVCRFGDRCSRLHVHPESSRVLLIPNMFTSIGLSEGLQDEQEFDTNLEYSEND 206
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
++ + F+ D++ E + GEI E +C N HL GNVY++++ EE+ KA + R
Sbjct: 207 LRSQFIEFYNDIYPEFQ-AAGEIREFKICCNYEPHLRGNVYVEYQSEEECHKAFRMFHGR 265
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISRELRRYLYSRRKR 178
W+ R ++ + SPV +++ A C + C + CNF+H+ P+++ R R +R
Sbjct: 266 WYAQRQLFCQFSPVNNWKSAICGLFRQKRCPKGKHCNFLHVFENPVAQSTRSAFNDRHRR 325
Query: 179 SS 180
S
Sbjct: 326 HS 327
>gi|350595997|ref|XP_003360579.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Sus scrofa]
Length = 407
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
+C FY K GACR GD+CSR H+ P S T+L+ +++ D +++ ++
Sbjct: 141 AHCPFYIKTGACRFGDKCSRKHSFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 200
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 201 EETYQQFLDFYDDVLPEFKN-VGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFN 259
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E+ PVT ++ A C +E+ +C R CNF+H+
Sbjct: 260 GRWYAGRQLQCEICPVTQWKMAICGLFEIQQCPRGKHCNFLHV 302
>gi|348541563|ref|XP_003458256.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Oreochromis
niloticus]
Length = 595
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC F+ K GACR GDRCSR H PT S T+++ ++ D + + + ++
Sbjct: 176 ANCPFFLKTGACRFGDRCSRKHTYPTTSPTLMIRGMFRTFGMEESRRDDYDIDACLEHSE 235
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EEMQE + F+ DV E + G++ + V N HL GNVY++F EE ++A N
Sbjct: 236 EEMQESFLEFYHDVLPEFK-SVGKVLQFKVSCNYEPHLRGNVYVQFDTEEQCKEAFIKFN 294
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR ++ E+SPVT ++ A C ++ C + CNF+H+
Sbjct: 295 GRWYAGRQLHCEISPVTRWKNAICGLFDRHRCPKGKHCNFLHV 337
>gi|241948837|ref|XP_002417141.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
gi|223640479|emb|CAX44731.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
Length = 372
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 86/134 (64%), Gaps = 4/134 (2%)
Query: 46 SADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 105
S D SH + +TDE++++ +D F++D+FV K G+I +M VC+N +HL G+VY+KF
Sbjct: 194 SHDESHPV--LTDEQIRKDFDLFYQDIFVHIA-KLGQINDMAVCEN-ENHLSGHVYVKFN 249
Query: 106 REEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 165
EDA A LN W+ GRP+Y+ELSPV +A C ++ G C R CN++H+K +
Sbjct: 250 DYEDAYNANLQLNQEWYNGRPIYSELSPVNSISDAHCSAWDHGHCNRGATCNYLHVKQPT 309
Query: 166 RELRRYLYSRRKRS 179
+ +++ LY + +S
Sbjct: 310 QGMKKSLYDSQSKS 323
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP 40
V CSFY +IGACRHG++C++ H +PT ++TIL+ NLY NP
Sbjct: 24 VLCSFYTRIGACRHGEKCTKKHLRPTSTKTILIPNLYQNP 63
>gi|85014399|ref|XP_955695.1| U2 small nuclear RNA auxillary factor [Encephalitozoon cuniculi
GB-M1]
gi|19171389|emb|CAD27114.1| U2 snRNP AUXILIARY FACTOR SMALL SUBUNIT (SPLICING FACTOR U2AF)
[Encephalitozoon cuniculi GB-M1]
Length = 254
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C FY K CR+G C+++H PT S+ +++ +Y+ P+N +S G +E +Q
Sbjct: 8 CLFYSKTNGCRYGHECTKVHRIPTRSRVVVVKAMYLYPKNDPESTLG--------EESVQ 59
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
H D F+ED F E KYG I ++ + N ++GN+YI+F EE A + ++ R++
Sbjct: 60 IHLDLFYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRCAEEIGRRYY 119
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
GG+ + AEL + C ++E G C + C F+H +SR L
Sbjct: 120 GGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKCGFIHAARVSRSL 165
>gi|546061|gb|AAB30301.1| human U2af35 homolog [Mus musculus]
Length = 428
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDE 59
+C FY K GACR G+RCSR H+ PT S T+L+ +++ D +N+ ++E
Sbjct: 162 SCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANLEYSEE 221
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
E + + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 222 ETYQQFLDFYHDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 280
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +EM +C + CNF+H+
Sbjct: 281 RWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 322
>gi|26326547|dbj|BAC27017.1| unnamed protein product [Mus musculus]
Length = 428
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDE 59
+C FY K GACR G+RCSR H+ PT S T+L+ +++ D +N+ ++E
Sbjct: 162 SCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANLEYSEE 221
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
E + + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 222 ETYQQFLDFYHDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 280
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +EM +C + CNF+H+
Sbjct: 281 RWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 322
>gi|449330260|gb|AGE96520.1| u2 snrnp auxiliary factor small subunit [Encephalitozoon cuniculi]
Length = 254
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C FY K CR+G C+++H PT S+ +++ +Y+ P+N +S G +E +Q
Sbjct: 8 CLFYSKTNGCRYGHECTKVHRIPTRSRVVVVKAMYLYPKNDPESTLG--------EESVQ 59
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
H D F+ED F E KYG I ++ + N ++GN+YI+F EE A + ++ R++
Sbjct: 60 IHLDLFYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRCAEEIGRRYY 119
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
GG+ + AEL + C ++E G C + C F+H +SR L
Sbjct: 120 GGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKCGFIHAARVSRSL 165
>gi|6755917|ref|NP_035793.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Mus musculus]
gi|2842676|sp|Q64707.1|U2AFL_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=SP2; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
1
gi|12044258|gb|AAG47771.1|AF309654_1 U2AF small subunit-related protein [Mus musculus]
gi|544778|gb|AAB29564.1| SP2=U2 small nuclear ribonucleoprotein auxiliary factor small
subunit homolog [mice, brain, Peptide, 428 aa]
gi|575893|dbj|BAA04230.1| SP2 [Mus musculus]
gi|1468962|dbj|BAA05486.1| U2AF small subunit-related protein [Mus musculus]
gi|22255349|dbj|BAC07536.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) related
protein [Mus musculus]
gi|124376102|gb|AAI32556.1| Zrsr1 protein [Mus musculus]
gi|148675928|gb|EDL07875.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 1 [Mus musculus]
gi|223460302|gb|AAI38595.1| Zrsr1 protein [Mus musculus]
Length = 428
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDE 59
+C FY K GACR G+RCSR H+ PT S T+L+ +++ D +N+ ++E
Sbjct: 162 SCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANLEYSEE 221
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
E + + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 222 ETYQQFLDFYHDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 280
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +EM +C + CNF+H+
Sbjct: 281 RWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 322
>gi|62945360|ref|NP_001017504.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Rattus norvegicus]
gi|55778495|gb|AAH86322.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
1 [Rattus norvegicus]
Length = 428
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDE 59
+C FY K GACR G+RCSR H+ PT S T+L+ +++ D +N+ ++E
Sbjct: 163 SCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANLEYSEE 222
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
E + + +F+ DV E ++ G++ + V NL HL GNVY++++ EE+ + A++ N
Sbjct: 223 ETYQQFLDFYHDVLPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNG 281
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +EM +C + CNF+H+
Sbjct: 282 RWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 323
>gi|344288699|ref|XP_003416084.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 532
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 3/161 (1%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEE 60
C FY K GACR GDRCSR H+ PT S T+L+ +++ D +++ ++EE
Sbjct: 221 CPFYSKTGACRFGDRCSRKHSFPTSSPTLLIKSMFTTFGMEQCRMDDYDPDASLEYSEEE 280
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ + F++DV E + G++ + V N HL GNVY++++ EE+ + A++ N R
Sbjct: 281 TYQQFLEFYDDVLPEFRN-VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAALSVFNGR 339
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
W+ GR + E PVT ++ A C +E +C R CNF+H+
Sbjct: 340 WYAGRQLQCEFCPVTRWQMAICGLFETQQCPRGKHCNFLHV 380
>gi|254576833|ref|XP_002494403.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
gi|238937292|emb|CAR25470.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
Length = 137
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 82/126 (65%), Gaps = 1/126 (0%)
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
+ +D +ED+++E ++G + M +C+N DHL GNVY+ + RE+DAE A N+ N RWF
Sbjct: 12 QDFDALYEDIYMEAC-RFGPVRSMVICENRNDHLKGNVYLYYEREQDAEDAKNNFNTRWF 70
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRR 182
RP+Y +L+ V DFREA CR++++G C R G CNFMH++ S ++R L + + +
Sbjct: 71 DERPLYCDLTHVADFREAVCRKHDLGTCERGGDCNFMHVRRPSTKIRIDLEKSQAKHWQF 130
Query: 183 SRSRSR 188
RS+
Sbjct: 131 ETKRSK 136
>gi|410978386|ref|XP_003995574.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Felis catus]
Length = 468
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 93/163 (57%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRC R HN P+ S T+L+ +++ D +++ ++
Sbjct: 170 ANCPFYGKTGACRFGDRCLRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + + +F++DV E G++ + V N HL GNVY++++ EE+ + A++ N
Sbjct: 230 EETYQQFLDFYDDVLPEFRS-VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAALSLFN 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 289 GRWYAGRQLRCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|344288487|ref|XP_003415981.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 489
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 3/161 (1%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEE 60
C FY K GACR GDRCSR H+ P S T+L+ +++ D +++ ++EE
Sbjct: 158 CPFYSKTGACRFGDRCSRKHSFPASSPTLLIKSMFTTFGMEQSRMDDYDPDASLEYSEEE 217
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ + F++DV E ++ G++ + V N HL GNVY++++ EE+ + A + N R
Sbjct: 218 TYQQFLEFYDDVLPEFKN-VGKVIQFKVSCNSEPHLRGNVYVQYQSEEECQAAHSLFNGR 276
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
W+ GR + E PVT ++ A CR +E +C R CNF+H+
Sbjct: 277 WYAGRQLQCEFCPVTRWQMAICRVFETQQCPRGKHCNFLHV 317
>gi|67476636|ref|XP_653880.1| U2 snRNP auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56470879|gb|EAL48494.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407039409|gb|EKE39628.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
gi|449708002|gb|EMD47542.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 251
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 97/186 (52%), Gaps = 20/186 (10%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ K+G+CRHG+ C ++H P S TILL +++ Q V + Q
Sbjct: 7 CEFFSKVGSCRHGNICEKVHITPHSSVTILLPHVWPAQQ--------------VITPQDQ 52
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
E Y++FF D++ C +G++ +M V +N HL GNV +KF E AE+A+ L + F
Sbjct: 53 EQYEHFFFDLYTLCSG-FGKVVDMIVSENQASHLKGNVLVKFATEAMAEEAIKHLQGQLF 111
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE---LRRYLYSRR--K 177
G + + D +E+ C+Q++MG C + CN++H+ PI + L Y Y K
Sbjct: 112 GSVVLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVLPIPNQFASLESYGYPSTLVK 171
Query: 178 RSSRRS 183
R R S
Sbjct: 172 REKRLS 177
>gi|255573856|ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 857
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 8/163 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P + T+L+ N+Y P + + +G TDEE
Sbjct: 219 AHCPFHLKTGACRFGQRCSRVHFYPDKANTLLMKNMYNGPGLAWEQDEGLEH----TDEE 274
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
++ Y+ F+EDV E KYGEI VC N HL GNVY++++ + A A +N R
Sbjct: 275 VERSYEEFYEDVHTEFL-KYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAYCSINGR 333
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ V E VT ++ A C +Y + C+R CNF+H
Sbjct: 334 YFAGKQVNCEFVNVTRWKVAICGEYMKSRLQMCSRGTACNFIH 376
>gi|357142577|ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Brachypodium distachyon]
Length = 748
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C FY K ACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 210 AHCPFYLKTAACRFGVRCSRVHFYPDKSCTLLMKNMYNGPGLALEQDEGLEF----TDEE 265
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A N +N R
Sbjct: 266 VEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYNSMNGR 324
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ + E VT ++ A C +Y C+ CNF+H
Sbjct: 325 YFAGKQITCEFVAVTKWKAAICGEYMRSRFKTCSHGVACNFIH 367
>gi|189525066|ref|XP_001920562.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Danio rerio]
Length = 635
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYIN--PQNSAKSADGSHLISNVTD 58
NC F+ K GACR GDRCSR H+ P S T+++ ++++ + S + + ++
Sbjct: 183 ANCPFFLKTGACRFGDRCSRKHDHPASSCTLMVRGMFVSFGMEQSRRDDYDTDASLEYSE 242
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE+ + + +F+ED E ++ G + + V N HL GNVY+++ EE ++A N
Sbjct: 243 EELHQQFLDFYEDALPEFKN-AGRVVQFKVSCNFEPHLRGNVYVQYETEEQCKEAFVMFN 301
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E SPVT ++ A C ++ +C + CNF+H+
Sbjct: 302 GRWYAGRQLQCEFSPVTRWKTAICGLFDRRKCPKGKHCNFLHV 344
>gi|432851674|ref|XP_004067028.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Oryzias latipes]
Length = 591
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 3/163 (1%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC F+ K GACR G+RCSR H PT S T+++ +++ D + + + ++
Sbjct: 175 ANCPFFLKTGACRFGERCSRKHVYPTSSPTLMIRGMFMTFGMEQLRRDDYDMDACLEHSE 234
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
E++ E + F+ DV E + G++ + VC N HL GNVYI+F ++ ++A+ N
Sbjct: 235 EDLHESFLEFYHDVLPEFK-SVGKVVQFKVCCNYEPHLKGNVYIQFETDDQCKEALMKFN 293
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR + E+SPVT ++ A C ++ +C + CNF+H+
Sbjct: 294 GRWYAGRQLQCEISPVTRWKNAICGLFDRRKCPKGKHCNFLHV 336
>gi|297849356|ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338401|gb|EFH68818.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
Length = 772
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 244 AHCPFHLKTGACRFGPRCSRVHFYPNKSCTLLMKNMYNGPGIAWEQDEGL----EYTDEE 299
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ Y+ F+EDV E KYGE+ VC N HL GNVY+ +R E A A +N R
Sbjct: 300 AEHCYEEFYEDVHTEFL-KYGELINFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGR 358
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ V E ++ ++ A C +Y + C+R CNF+H
Sbjct: 359 YFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIH 401
>gi|167384024|ref|XP_001736783.1| splicing factor U2Af 38 kDa subunit [Entamoeba dispar SAW760]
gi|165900719|gb|EDR26968.1| splicing factor U2Af 38 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 251
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 20/186 (10%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ K+G+CRHGD C ++H P S TILL +++ Q V + Q
Sbjct: 7 CEFFSKVGSCRHGDICEKVHIIPQSSVTILLPHVWPAQQ--------------VITPQDQ 52
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
E Y++FF D++ C +G++ +M V +N HL GNV +KF E A +AV L + F
Sbjct: 53 EQYEHFFFDLYTLCSG-FGQVVDMIVSENQAPHLKGNVLVKFATEAMAAEAVKHLQGQLF 111
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE---LRRYLYSRR--K 177
+ + D +E+ C+Q++MG C + CN++H+ PI + L Y Y K
Sbjct: 112 SSVVLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVLPIPNQFASLESYGYPSTLVK 171
Query: 178 RSSRRS 183
R R S
Sbjct: 172 REKRLS 177
>gi|222623064|gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 8/163 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 124 AHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLALEQDEG----LECTDEE 179
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 180 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGR 238
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ + E VT ++ A C +Y C+R CNF+H
Sbjct: 239 YFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 281
>gi|15218489|ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
gi|229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 5;
Short=AtC3H5
gi|332190444|gb|AEE28565.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
Length = 757
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 244 AHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGL----EYTDEE 299
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ Y+ F+EDV E KYGE+ VC N HL GNVY+ +R E A A +N R
Sbjct: 300 AELCYEEFYEDVHTEFL-KYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGR 358
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ V E ++ ++ A C +Y + C+R CNF+H
Sbjct: 359 YFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIH 401
>gi|218190979|gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
Length = 731
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 8/163 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 220 AHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLALEQDEG----LECTDEE 275
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 276 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGR 334
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ + E VT ++ A C +Y C+R CNF+H
Sbjct: 335 YFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 377
>gi|396082086|gb|AFN83698.1| U2 small nuclear RNA auxillary factor [Encephalitozoon romaleae
SJ-2008]
Length = 259
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 8/172 (4%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C FY K CR+G C++ H P S+ +++ N+Y+ P+N S + +E +Q
Sbjct: 8 CIFYSKTNGCRYGLECTKAHRIPARSKVVVVKNMYLYPKNDPDS--------KLDNEAVQ 59
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
H D F+ED F E KYG + + + N L+GN+YI+F E+ + + + D+ R++
Sbjct: 60 IHLDLFYEDWFSEVSMKYGAVRMLAIASNSSLQLLGNIYIEFEDEKASLRCIEDIGKRYY 119
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYS 174
G+ + EL + C YE G C + C F+H+ ++ L L++
Sbjct: 120 SGKRIVVELGNCYRISDGVCTDYEKGLCGKGERCGFIHVAKVTESLMEELFA 171
>gi|205688456|sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 8/163 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 167 AHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLALEQDEG----LECTDEE 222
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 223 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGR 281
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ + E VT ++ A C +Y C+R CNF+H
Sbjct: 282 YFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 324
>gi|340374312|ref|XP_003385682.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Amphimedon
queenslandica]
Length = 466
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 93/165 (56%), Gaps = 5/165 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD--GSHLISNVTD 58
+NC F+ K GACR+GD CSR+H P S T+++ +Y + + + D + + D
Sbjct: 107 INCPFFIKTGACRYGDHCSRVHPIPNSSTTLIIRGMYNHVVLTQQLLDEHDEDVGLEMDD 166
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
E+M + + F++DVF E E K+GE+ + V N HL GN+Y+++ EE A+ N
Sbjct: 167 EDMLKDFKEFYQDVFPEFE-KFGEVVQFKVSCNYESHLRGNLYVQYSTEEACAAAIKQFN 225
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQY--EMGECTRSGFCNFMHL 161
R++ G+ + E PV ++ A C ++ + +C + CNF+H+
Sbjct: 226 GRYYAGKQLSCEYCPVEKWKTAICGEFLKQGSQCPKGKHCNFLHV 270
>gi|440802051|gb|ELR22990.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 294
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 21/149 (14%)
Query: 28 SQTILLLNLYINPQNS--AKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEE 85
SQT+L+ ++Y+ P + S D + + + +EH+++FFED+ E + +G +E+
Sbjct: 15 SQTLLIPHMYMPPVPAEWPTSPDDVQAMQKIQ-RDAEEHFNDFFEDIHDELRN-FGRLED 72
Query: 86 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 145
++VCDN G EKA+ L R++GGR + E SPVTDFREA CRQY
Sbjct: 73 LHVCDNTG-----------------EKAMKALTGRFYGGRLLVPEFSPVTDFREARCRQY 115
Query: 146 EMGECTRSGFCNFMHLKPISRELRRYLYS 174
+ EC R G CNFMHLK + EL R L+
Sbjct: 116 DSNECNRGGQCNFMHLKQVDPELERRLFG 144
>gi|359392832|gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays]
Length = 790
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 8/163 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 259 AHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALEQDEGLEF----TDEE 314
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 315 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGR 373
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ + E VT ++ A C +Y C+ CNF+H
Sbjct: 374 YFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGVACNFIH 416
>gi|363543273|ref|NP_001241852.1| RGH3 splicing factor [Zea mays]
gi|330470888|gb|AEC32092.1| RGH3 splicing factor [Zea mays]
gi|356609668|gb|AET25330.1| RGH3/ZmURP alpha protein isoform [Zea mays]
gi|359392836|gb|AEV45825.1| rough endosperm 3 alpha isoform [Zea mays]
Length = 755
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 8/163 (4%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 224 AHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALEQDEGLEF----TDEE 279
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 280 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGR 338
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ + E VT ++ A C +Y C+ CNF+H
Sbjct: 339 YFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGVACNFIH 381
>gi|68490634|ref|XP_710864.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490659|ref|XP_710852.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432105|gb|EAK91608.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432119|gb|EAK91621.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 377
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
Query: 56 VTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVN 115
+TDE++Q+ +D F++D+FV K G+I +M VC+N +HL G+VYIKF DA A
Sbjct: 209 LTDEQIQKDFDLFYQDIFVHVA-KLGQINDMAVCEN-ENHLSGHVYIKFNDYNDAIAANL 266
Query: 116 DLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
LN W+ G+PVY+ELSPV +A C+ ++ G C R CN++H+K ++ +++ L+
Sbjct: 267 QLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQPTQGIKKSLWDS 326
Query: 176 RKRS 179
+ ++
Sbjct: 327 QTKT 330
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP 40
V CSFY KIG+CRHG+ CS+ H KPT ++TILL NLY NP
Sbjct: 14 VLCSFYTKIGSCRHGEECSKKHLKPTITKTILLPNLYQNP 53
>gi|238879039|gb|EEQ42677.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 377
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
Query: 56 VTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVN 115
+TDE++Q+ +D F++D+FV K G+I +M VC+N +HL G+VYIKF DA A
Sbjct: 209 LTDEQIQKDFDLFYQDIFVHVA-KLGQINDMAVCEN-ENHLSGHVYIKFNDYNDAIAANL 266
Query: 116 DLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
LN W+ G+PVY+ELSPV +A C+ ++ G C R CN++H+K ++ +++ L+
Sbjct: 267 QLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQPTQGIKKSLWDS 326
Query: 176 RKRS 179
+ ++
Sbjct: 327 QTKT 330
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP 40
V CSFY KIG+CRHG+ CS+ H KPT ++TILL NLY NP
Sbjct: 14 VLCSFYTKIGSCRHGEECSKKHLKPTITKTILLPNLYQNP 53
>gi|410912868|ref|XP_003969911.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Takifugu rubripes]
gi|4741995|gb|AAD28792.1|AF146688_1 U2 small nuclear ribonucleoprotein auxiliary factor subunit-related
protein [Takifugu rubripes]
Length = 605
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDE 59
NC F+ K G+CR GDRCSR H PT S T+++ +++ D + + + ++E
Sbjct: 173 NCPFFLKTGSCRFGDRCSRKHVYPTASPTMMIRSMFKTFGMEEARRDDYDIDACLEHSEE 232
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
E+ E + F+ DV E + G++ + V N HL GNVY++F EE ++A N
Sbjct: 233 ELYESFLEFYHDVLPEFK-SVGKVLQFKVSCNHEPHLRGNVYVQFETEEQCKEAFIKFNG 291
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+ GR ++ E+ PVT ++ A C ++ +C + CNF+H+
Sbjct: 292 RWYAGRQLHCEMCPVTRWKNAICGLFDRQKCPKGKHCNFLHV 333
>gi|340508294|gb|EGR34030.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 126
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 80/113 (70%), Gaps = 8/113 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIG+CR+ ++C RIHN+P+ SQT+L+ ++Y + A G+ V++EE
Sbjct: 16 VNCPFYFKIGSCRYENKCLRIHNRPSESQTVLIKHMYTSSATELALAQGNR----VSEEE 71
Query: 61 MQEHYDN---FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
+++ D F+E+VF+E + YGEI+++ +CDN+GDH+ GNVY+K+ +E A
Sbjct: 72 IKKALDTFEEFYEEVFLELAN-YGEIDDLIICDNIGDHMRGNVYVKYIKESSA 123
>gi|390363017|ref|XP_788119.3| PREDICTED: uncharacterized protein LOC583099 [Strongylocentrotus
purpuratus]
Length = 746
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD--GSHLISNVTDEE 60
CSF+ K GACR +RCSR H P T+++ +Y N D + + +E
Sbjct: 184 CSFFLKTGACRFKERCSRTHPYPEQGTTLMIPGMYTNFGLGPDFKDEYDADVGLECDEES 243
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
++ F+EDV E + YGE+ ++ VC N HL GNVY+++R EE+A KA R
Sbjct: 244 AYLNFHEFYEDVLPEFRE-YGEVVQLKVCRNWEPHLRGNVYVQYRSEEEAAKAAQVFAGR 302
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
++GG+ + PV+ ++ A C + +C R CNF+H+
Sbjct: 303 FYGGKQLDPRYCPVSRWKPAICGLFHRDKCPRGKHCNFLHV 343
>gi|258575975|ref|XP_002542169.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
gi|237902435|gb|EEP76836.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
Length = 139
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 21/117 (17%)
Query: 56 VTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVN 115
+ ++Q H+D F+ED++ +L+GNVY +F+ E+ A+KA +
Sbjct: 13 MNPSQLQNHFDAFYEDLW---------------------YLIGNVYARFKYEDSAQKACD 51
Query: 116 DLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
LN+RW+ RP+Y ELSPVTDFREACCR C R GFCNF+H K S EL R L
Sbjct: 52 ALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELERDL 108
>gi|444322338|ref|XP_004181817.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
gi|387514862|emb|CCH62298.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
Length = 213
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 19/175 (10%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+++IGACR+ +C + H +PT S I+LLNL N+ E
Sbjct: 57 CFFFYEIGACRYNSKCIKKHIRPTRSNCIVLLNLIDLKLNT---------------EVTN 101
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
+D+ ++D+F+E K+G+I + + N D L GNVYIK+ + A A+N+ N RW+
Sbjct: 102 YAFDSIYQDIFLEAM-KFGKILSLEISVNENDCLNGNVYIKYLNDSIARDAMNNFNTRWY 160
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRK 177
RP+Y +L ++ E CR+Y+ G C R C +H + S L+ L S +K
Sbjct: 161 DERPIYCDL---VNYNEGTCRRYDNGNCARGPECTLLHRRWPSSRLKWDLESSQK 212
>gi|260796659|ref|XP_002593322.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
gi|229278546|gb|EEN49333.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
Length = 571
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 10/190 (5%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYIN---PQNSAKSADGSHLISNVTD 58
+C F+ K GACR GDRCSR H +P S T+L+ ++ Q D + + D
Sbjct: 129 DCPFFKKTGACRFGDRCSRKHTRPDSSTTLLIAGMFATFALDQTQRDDFDETMYLEYGED 188
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
E + + + F+ D E G + + VC N HL GNVY+++ REED +A+ +
Sbjct: 189 E-LYKDFIEFYNDTLPEFR-TLGRVVQFKVCCNHEPHLRGNVYVQYEREEDCLEAIRKFH 246
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKP-ISRELR----RYLY 173
R++ G+ + E++PVT ++ A C + C + CNF+H+ P RE R +
Sbjct: 247 GRFYAGKQLTCEMTPVTSWKSAICGLFSRKRCPKGKHCNFLHVFPNPGREFRDADEDHHL 306
Query: 174 SRRKRSSRRS 183
R ++ SRRS
Sbjct: 307 GRGQQDSRRS 316
>gi|449680951|ref|XP_002158120.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Hydra
magnipapillata]
Length = 403
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYIN-----PQNSAKSADGSHLISNV 56
NC FY K GACR G RCSRIH K S TIL+ N + + P + ++ D V
Sbjct: 55 NCKFYIKTGACRFGPRCSRIHLKFDNSPTILIQNFFTDARLAIPMLNERNNDFGLEYDEV 114
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
++ ++ F++DV E G + C N HL GNVY++++ A +A+
Sbjct: 115 ---DLIHEFEKFYDDVIGEFRAA-GTVVMFKCCQNYVPHLRGNVYVQYQDHNGALRALKM 170
Query: 117 LNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
N RW+ GR + ELSPVT+++ + C ++ C R CNF+H+
Sbjct: 171 FNGRWYAGRQLSVELSPVTNWKSSICGLFDKRLCPRGKACNFLHV 215
>gi|156537789|ref|XP_001608048.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Nasonia vitripennis]
Length = 721
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE-EM 61
C F+ K GACR+GD CSR H +P S IL+ N Y + S + + D E
Sbjct: 175 CPFFNKTGACRYGDICSRNHQRPGLSTVILVPNFYTHFSLERHSHEYDTDVRLEYDHRET 234
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
+ H+ +F+ DV E E K+G+I+ + C N HL GN+Y+++ E +A +A+ L RW
Sbjct: 235 RNHFRDFYFDVVPELE-KFGKIKTLQYCKNTEAHLRGNLYVEYATEREAARALRGLKGRW 293
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
+ GR ++ E + +R A C M C + CNF+H+
Sbjct: 294 YAGRQLHCEFVNLKSWRGAIC---GMMRCPKGSACNFLHV 330
>gi|356528629|ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 587
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + L TDEE
Sbjct: 174 AHCPFHLKTGACRFGIRCSRVHFYPDKSSTLLIKNMYSGPGLACDQDQDEGL--EYTDEE 231
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
++ ++ F+EDV E K+GEI VC N HL GNVY++++ + A A N +N R
Sbjct: 232 VERCFEEFYEDVHTEFL-KFGEIVNFKVCKNGSFHLRGNVYVQYKSLDSALLAYNTVNGR 290
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ V + +T ++ A C +Y C+ CNF+H
Sbjct: 291 YFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTTCNFIH 333
>gi|307200055|gb|EFN80401.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Harpegnathos saltator]
Length = 490
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLIS-NVTDEEM 61
C F+ K GACR+GD+CS+ H S+ IL+ Y + SA+ +S E
Sbjct: 175 CPFFMKTGACRYGDKCSKNHRAVFLSKVILIPGFYSHFSLEKNSAEYDTDVSLEFETSET 234
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
+H+ F+EDV E E YG+I + C N HL GN+Y++++ E +A +A LN RW
Sbjct: 235 WQHFREFYEDVITELES-YGKISVLRCCCNTETHLRGNLYVEYQTEREATRAWKRLNGRW 293
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 160
+ G+ + E + +R A C M +C + CNF+H
Sbjct: 294 YAGKQLRCEFVNLISWRNAICG---MSKCPKGTACNFLH 329
>gi|270006539|gb|EFA02987.1| hypothetical protein TcasGA2_TC010403 [Tribolium castaneum]
Length = 347
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY--INPQNSAKSADGSHLISNVTDEE 60
C F+ K ACR D CSR H KP S+ +L+ N Y + + + D S L + E
Sbjct: 168 CPFFQKTSACRFRDSCSRNHIKPGVSRILLIPNFYSHYSLEQTENEYDDSSL--EFENHE 225
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
H+ +FF DV E E ++G I + VC N HL GNVY+++ +A K+ N R
Sbjct: 226 TYSHFKDFFFDVLPEME-RFGRIRQFKVCCNRESHLRGNVYVEYSTTREAVKSFQVFNGR 284
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKP 163
W+GGR + E + ++ A C + +C + CNF+H+ P
Sbjct: 285 WYGGRQLSVEFCNIESWKSAICGLHSRKKCPKGSSCNFLHVFP 327
>gi|123455079|ref|XP_001315287.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897959|gb|EAY03064.1| hypothetical protein TVAG_171620 [Trichomonas vaginalis G3]
Length = 241
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 5/174 (2%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKS-ADGSHLISNVTDEEM 61
CS + K G C GDRC+++H P ++T++ +++ NP + DG + ++ +E
Sbjct: 13 CSIFEKTGCCPKGDRCNKVHFIPAMARTVIFHHIFPNPDFFIQCLPDG---VITMSAQEK 69
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
Q + D FF D+F+ C ++G IE++ +C N D L GN Y+ + + + A A+ L+ ++
Sbjct: 70 QRYIDAFFLDMFLMCR-RFGAIEDLLLCSNTMDCLSGNFYVFYEQSDCARMALTALDGQY 128
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSR 175
+ GR V+ L V + A C+ GEC+R C F+H S L + + R
Sbjct: 129 YAGRKVHVTLCSVPRYSTALCKSSMKGECSRGNECAFIHALEPSFALYQEVIPR 182
>gi|359392870|gb|AEV45842.1| rough endosperm 3 epsilon isoform [Zea mays]
Length = 368
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 224 AHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALEQDEGLEF----TDEE 279
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A + +N R
Sbjct: 280 IEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGR 338
Query: 121 WFGGRPVYAELSPVTDFREACCRQY 145
+F G+ + E VT ++ A C +
Sbjct: 339 YFAGKQITCEFVAVTRWKAAICDMF 363
>gi|401828573|ref|XP_003888000.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
gi|392999008|gb|AFM99019.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
Length = 257
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C FY K CR+G C++ H P+ S+ +++ N+Y+ P+N +S ++ + +Q
Sbjct: 8 CIFYSKTNGCRYGLECTKAHRIPSRSKVVVIKNMYLYPRNDPESV--------LSKDAVQ 59
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
H D F+ED F E KYG + + + N+ L+GN+YI+F E A + + ++ R++
Sbjct: 60 IHLDLFYEDWFSEMSVKYGAVRMLAIASNISPQLLGNIYIEFEEERAALRCMEEIGKRYY 119
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISREL 168
G+ + EL + C +E C + C F+H+ + L
Sbjct: 120 CGKRIVVELGNCYRISDGVCTDHEKDLCAKGERCGFIHVAKATASL 165
>gi|449478305|ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Cucumis sativus]
Length = 838
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 8/162 (4%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEM 61
+C F+ K GACR G RCSRIH P S T+L+ N+Y P + + +G TDEE+
Sbjct: 220 HCPFHLKTGACRFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWEQDEGLEF----TDEEV 275
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
+ Y+ F++DV E KYGEI VC N HL GN+Y+ ++ + A A N N R+
Sbjct: 276 ERCYEEFYDDVHTEFL-KYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVLAYNANNGRF 334
Query: 122 FGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+ G+ + E VT ++ A C ++ C+ CNF+H
Sbjct: 335 YAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIH 376
>gi|449432946|ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
Length = 867
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ K GACR G RCSRIH P S T+L+ N+Y P + + +G TDEE++
Sbjct: 221 CPFHLKTGACRFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWEQDEGLEF----TDEEVE 276
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
Y+ F++DV E KYGEI VC N HL GN+Y+ ++ + A A N N R++
Sbjct: 277 RCYEEFYDDVHTEFL-KYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVLAYNANNGRFY 335
Query: 123 GGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
G+ + E VT ++ A C ++ C+ CNF+H
Sbjct: 336 AGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIH 376
>gi|149043575|gb|EDL97026.1| rCG60540, isoform CRA_c [Rattus norvegicus]
Length = 85
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 51/55 (92%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISN 55
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH S+
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCKSH 70
>gi|50949477|emb|CAH10401.1| hypothetical protein [Homo sapiens]
Length = 67
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 49/51 (96%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSH 51
VNCSFYFKIGACRHGDRCSR+HNKPTFSQTIL+ N+Y NPQNSA++ADGSH
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSH 66
>gi|225465261|ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 8/162 (4%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEM 61
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE+
Sbjct: 205 HCPFHIKTGACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEG----LEYTDEEV 260
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
+ Y+ F+EDV E K+GEI VC N HL GNVY+ ++ + A A + +N +
Sbjct: 261 ERCYEEFYEDVQTEFL-KFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHSINGLY 319
Query: 122 FGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+ G+ V E VT ++ A C +Y C+ CNF+H
Sbjct: 320 YAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIH 361
>gi|383865202|ref|XP_003708064.1| PREDICTED: uncharacterized protein LOC100879762 [Megachile
rotundata]
Length = 620
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD-GSHLISNVTDEEM 61
C F+ K GACR+GD CSR H + S+ IL+ Y + SA+ + + E
Sbjct: 177 CPFFNKTGACRYGDTCSRNHRRVCLSKVILVPGFYTHFSLEKNSAEYDTDIALEFETSET 236
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
++H+ F++DV E E +G I+ + C N HL GN+Y+++ E +A +A+ L RW
Sbjct: 237 RQHFREFYKDVVPELES-FGRIKTLKYCCNTEIHLRGNLYVEYYTEREAARALRRLKGRW 295
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 160
+ GR + E + +R A C M +C + CNF+H
Sbjct: 296 YAGRQLNCEFVNLKSWRSAVC---GMSKCPKGRACNFLH 331
>gi|350422847|ref|XP_003493303.1| PREDICTED: hypothetical protein LOC100742355 [Bombus impatiens]
Length = 638
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD-GSHLISNVTDEEM 61
C F+ K GACR+GD CSR H + S+ IL+ Y + SA+ + + E
Sbjct: 186 CPFFTKTGACRYGDTCSRNHRRVCLSKVILVPGFYTHFSLEKNSAEYDTDIALEFESSET 245
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
++H+ F++DV E E +G+I+ + C N HL GN+Y+++ E +A +A+ L RW
Sbjct: 246 RQHFREFYKDVVPELES-FGKIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRW 304
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 160
+ GR + E + +R A C M +C + CNF+H
Sbjct: 305 YAGRQLNCEFVNLRSWRSAVCG---MSKCPKGRACNFLH 340
>gi|157128201|ref|XP_001655088.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108872656|gb|EAT36881.1| AAEL011071-PA [Aedes aegypti]
Length = 509
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 5/168 (2%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVT--DEE 60
C F+ K+GACR G RCS H P S+ +LL N + +P + L S++ D+E
Sbjct: 189 CVFFGKVGACRFGVRCSSDHAIPGLSELLLLPNFFAHPALDHQQHPEYGLDSSIEFDDDE 248
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ Y FF DV E E +G I V N HL GNVY+++ + DA KA +N R
Sbjct: 249 LYRSYTEFFMDVIEEFES-FGPISGFFVTRNFEPHLRGNVYVQYEKVRDAAKAYQRMNGR 307
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPISR 166
++ + + E + A C +E C + CN++HL P+++
Sbjct: 308 FYASKQLRVEFRAPIVWTAAVCGLFERSRCQKGKSCNYLHLLVNPVAK 355
>gi|380019200|ref|XP_003693502.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Apis florea]
Length = 459
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD-GSHLISNVTDEEM 61
C F+ K GACR+GD CSR H + S+ IL+ + Y + A+ + + E
Sbjct: 177 CPFFTKTGACRYGDTCSRNHRRVCLSKVILVPSFYTHFSLEKNCAEYDTDIALEFESSET 236
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
++H+ F++DV E E +G I+ + C N HL GN+Y+++ E +A +A+ L RW
Sbjct: 237 RQHFREFYKDVVPELES-FGRIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRW 295
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 160
+ GR + E + +R A C M +C + CNF+H
Sbjct: 296 YAGRQLNCEFVNLKSWRSAVC---GMSKCPKGRACNFLH 331
>gi|328789326|ref|XP_392139.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Apis mellifera]
Length = 455
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD-GSHLISNVTDEEM 61
C F+ K GACR+GD CSR H + S+ IL+ + Y + A+ + + E
Sbjct: 177 CPFFTKTGACRYGDTCSRNHRRVCLSKVILVPSFYTHFSLEKNCAEYDTDIALEFESSET 236
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
++H+ F++DV E E +G I+ + C N HL GN+Y+++ E +A +A+ L RW
Sbjct: 237 RQHFREFYKDVVPELES-FGRIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRW 295
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 160
+ GR + E + +R A C M +C + CNF+H
Sbjct: 296 YAGRQLNCEFVNLKSWRSAVC---GMSKCPKGRACNFLH 331
>gi|340715501|ref|XP_003396250.1| PREDICTED: hypothetical protein LOC100645560 [Bombus terrestris]
Length = 629
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD-GSHLISNVTDEEM 61
C F+ K GACR+GD CSR H + S+ IL+ Y + SA+ + + E
Sbjct: 177 CPFFTKTGACRYGDTCSRNHRRVCLSKVILVPGFYTHFSLEKNSAEYDTDIALEFESSET 236
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
++H+ F++DV E E +G I+ + C N HL GN+Y+++ E +A +A+ L RW
Sbjct: 237 RQHFREFYKDVVPELES-FGRIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRW 295
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 160
+ GR + E + +R A C M +C + CNF+H
Sbjct: 296 YAGRQLNCEFVNLRSWRSAVC---GMSKCPKGRACNFLH 331
>gi|390478473|ref|XP_003735517.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Callithrix jacchus]
Length = 458
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYI--NPQNSAKSADGSHLISNVTD 58
NC F K GACR GD CSR HN PT S T+L+ ++I + ++ I +
Sbjct: 168 ANCPFXSKTGACRFGDGCSRKHNFPTSSPTLLIETMFIMFGMEQCRRNDYDPDAILEDSK 227
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + +F+EDV E ++ G + ++ V NL HL GN+Y+ ++ E + + A++ N
Sbjct: 228 EETYPQFLDFYEDVLPEFKN-VGRVIQLRVSCNLKPHLRGNIYVHYQLEAEXQAALSLFN 286
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPIS 165
RW+ G + E PV ++ A C +E + CNF+ + PIS
Sbjct: 287 KRWYTGPHLQCEFCPVIRWKMAICSSFEKQQHPTGKHCNFLPVFRNPIS 335
>gi|380804095|gb|AFE73923.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Query: 17 RCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEEMQEHYDNFFEDVFV 74
RCSR HN PT S T+L+ +++ D +++ ++EE+ + + +F+EDV
Sbjct: 1 RCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEEIYQQFLDFYEDVLP 60
Query: 75 ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPV 134
E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+ GR + E PV
Sbjct: 61 EFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPV 119
Query: 135 TDFREACCRQYEMGECTRSGFCNFMHL 161
T ++ A C +E+ +C R CNF+H+
Sbjct: 120 TRWKMAICGLFEIQQCPRGKHCNFLHV 146
>gi|403255704|ref|XP_003920552.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Saimiri boliviensis
boliviensis]
Length = 464
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 15 GDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEEMQEHYDNFFEDV 72
G +CSR HN PT S T+L+ +++ D +++ ++EE + + +F+EDV
Sbjct: 174 GLKCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDV 233
Query: 73 FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELS 132
E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+ GR + E
Sbjct: 234 LPEFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFC 292
Query: 133 PVTDFREACCRQYEMGECTRSGFCNFMHL 161
PVT ++ A C +E+ +C R CNF+H+
Sbjct: 293 PVTRWKMAICGLFEIQQCPRGKHCNFLHV 321
>gi|357617275|gb|EHJ70693.1| hypothetical protein KGM_02050 [Danaus plexippus]
Length = 392
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY--INPQNSAKSADGSHLISNVTDEE 60
C FY K CR GD CSR H P S+ +L NL+ +NS + + ++ D +
Sbjct: 161 CPFYAKTACCRFGDECSRNHKYPGISKILLAPNLFGHFGLENSNFNEYDTDIMLEYEDSD 220
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ + FF D+ E + K+G++ E+ VC+N HL GN YI++ A A L+ R
Sbjct: 221 TYKDFKEFFFDILPEFQ-KFGQVVEIKVCNNFEKHLRGNTYIEYSDVRSAVSAYRALHTR 279
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
W+GG+ + + + + A C G C + CNF+H+
Sbjct: 280 WYGGKQLSLQFCRLLSWSSAICGLQVTGRCPKGRACNFLHV 320
>gi|380804933|gb|AFE74342.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Query: 17 RCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEEMQEHYDNFFEDVFV 74
RCSR HN PT S T+L+ +++ D +++ ++EE + + +F+EDV
Sbjct: 1 RCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLP 60
Query: 75 ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPV 134
E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+ GR + E PV
Sbjct: 61 EFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPV 119
Query: 135 TDFREACCRQYEMGECTRSGFCNFMHL 161
T ++ A C +E+ +C R CNF+H+
Sbjct: 120 TRWKMAICGLFEIQQCPRGKHCNFLHV 146
>gi|380804633|gb|AFE74192.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 199
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Query: 17 RCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEEMQEHYDNFFEDVFV 74
RCSR HN PT S T+L+ +++ D +++ ++EE + + +F+EDV
Sbjct: 1 RCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLP 60
Query: 75 ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPV 134
E ++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+ GR + E PV
Sbjct: 61 EFKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPV 119
Query: 135 TDFREACCRQYEMGECTRSGFCNFMHL 161
T ++ A C +E+ +C R CNF+H+
Sbjct: 120 TRWKMAICGLFEIQQCPRGKHCNFLHV 146
>gi|158299259|ref|XP_319372.4| AGAP010194-PA [Anopheles gambiae str. PEST]
gi|157014279|gb|EAA13785.4| AGAP010194-PA [Anopheles gambiae str. PEST]
Length = 505
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP--QNSAKSADGSHLISNVTDE 59
+C F+ K GACRHG RC H P SQ IL+ N + +P + + + G ++
Sbjct: 165 DCKFFLKTGACRHGYRCGGNHPTPGVSQVILIPNFFSHPALEQAVHAEYGHDARLEFDED 224
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+++ Y+ FF D+ E E +G + + VC N HL G+VYI++ +A A +N
Sbjct: 225 DLKNSYNEFFRDIIQEFE-MFGTVRHIFVCRNSVAHLRGSVYIEYESMRNAAAAYLRMNG 283
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
R++ + ++ E + A C EM C + CNF+H+
Sbjct: 284 RFYAKKQLHVEFRNTLTWPTAVCGLNEMNRCQKGAGCNFLHI 325
>gi|123437829|ref|XP_001309706.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121891444|gb|EAX96776.1| hypothetical protein TVAG_216790 [Trichomonas vaginalis G3]
Length = 206
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQN-SAKSADGSHLISNVTDEEM 61
C + K G C G+ C++ H S+ +L +LY +P A GS IS DEE
Sbjct: 8 CLQFEKTGVCLKGEMCNKPHRSDPMSRILLFKHLYPDPDVFLALLPTGSVTIS---DEEK 64
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
Q D F+ D+F+ C+ ++G +E++ + N D + GNVY+ F+ + A+ A LNN++
Sbjct: 65 QRAADAFYYDIFLMCQ-RFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLTLNNQY 123
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
+ GR V L+P++ A C + C CN++H IS + + + R R
Sbjct: 124 YAGRKVECVLTPISRLSNAICNE---SACPYGSTCNYVHPLKISEHITKICFPRSSR 177
>gi|123433241|ref|XP_001308579.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890266|gb|EAX95649.1| hypothetical protein TVAG_045370 [Trichomonas vaginalis G3]
Length = 206
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C + K G C G+ C++ H S+ +L +LY +P + ++DEE Q
Sbjct: 8 CLQFEKTGVCLKGEMCNKPHRSDPMSRVLLFKHLYPDPDVFLSLLPAGSV--TISDEEKQ 65
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
D F+ D+F+ C+ ++G +E++ + N D + GNVY+ F+ + A+ A +LNN+++
Sbjct: 66 RAADAFYYDIFLMCQ-RFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLNLNNQYY 124
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKR 178
GR V L+P++ A C + C CN++H IS + + + R R
Sbjct: 125 AGRKVECVLTPISRLSNAICNE---TSCPYGSTCNYVHPLKISEHITKICFPRSSR 177
>gi|47230617|emb|CAF99810.1| unnamed protein product [Tetraodon nigroviridis]
Length = 471
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 3/154 (1%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDE 59
NC F+ K G+CR GDRCSR H PT S T+++ +++ D + + + ++E
Sbjct: 160 NCPFFLKTGSCRFGDRCSRKHVYPTASPTLMIRSMFKTFGMEEARRDDYDMDACLEHSEE 219
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
E+ E + F+ DV E + G++ + V N HL GNVY++F EE ++A+ N
Sbjct: 220 ELYESFLEFYHDVLPEFKS-VGKVLQFKVSCNHEPHLRGNVYVQFGSEEQCKEALIKFNG 278
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRS 153
RW+ GR ++ E+ PVT ++ A C Q + R+
Sbjct: 279 RWYAGRQLHCEMCPVTRWKNAICGQLLLSHHIRA 312
>gi|356555094|ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 518
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GAC G RCSR+H P S T L+ N+Y P + L DEE
Sbjct: 185 AHCPFHLKTGACCFGIRCSRVHFYPDKSSTFLIKNMYNGPGLACDRDQDEGL--EYKDEE 242
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
++ ++ F+EDV E K+GE+ VC N H GNVY++++ + A A N +N R
Sbjct: 243 VERCFEEFYEDVHTEFL-KFGEVVNFKVCKNGSFHWRGNVYVQYKSLDSALLAYNSVNGR 301
Query: 121 WFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+F G+ V + +T ++ A C +Y C+ CNF+H
Sbjct: 302 YFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTACNFIH 344
>gi|322795207|gb|EFZ18029.1| hypothetical protein SINV_09275 [Solenopsis invicta]
Length = 470
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY--INPQNSAKSADGSHLISNVTDEE 60
C F+ K G CR+G+ CS+ H K S IL+ Y + Q A+ D + + + E
Sbjct: 169 CPFFTKTGVCRYGNACSKNHRKVFLSNVILIPGFYSHFSLQQHAEEYD-TDVALEFENSE 227
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+H+ FFEDV E E +G I+ + C N+ HL GN+Y+++ E +A +A +L R
Sbjct: 228 TWQHFYEFFEDVITELES-FGRIKVIKCCRNMEVHLRGNLYVEYYTEREAARAWRNLKGR 286
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTR-SGFCNFMH 160
W+GG+ ++ E + + A C + +C + + +CNF+H
Sbjct: 287 WYGGKRLHCEFVNLISWGGAIC---GIAQCPKGTKYCNFLH 324
>gi|4914334|gb|AAD32882.1|AC005489_20 F14N23.20 [Arabidopsis thaliana]
Length = 836
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 93/210 (44%), Gaps = 51/210 (24%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV---- 56
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G L++ +
Sbjct: 272 AHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGLELLTLIYSLS 331
Query: 57 --------TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCD------------------ 90
TDEE + Y+ F+EDV E KYGE+ VC
Sbjct: 332 LFPPSLQYTDEEAELCYEEFYEDVHTEFL-KYGELVNFKVCRFSSAPSPPFPSFPLPPLF 390
Query: 91 -----------------NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 133
N HL GNVY+ +R E A A +N R+F G+ V E
Sbjct: 391 FLLSIISHRFILYQIRINGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVN 450
Query: 134 VTDFREACCRQY---EMGECTRSGFCNFMH 160
++ ++ A C +Y + C+R CNF+H
Sbjct: 451 ISRWKVAICGEYMKSRLKTCSRGSACNFIH 480
>gi|426395277|ref|XP_004063901.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 295
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 18 CSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEEMQEHYDNFFEDVFVE 75
CSR HN PT S T+L+ +++ D +++ ++EE + + +F+EDV E
Sbjct: 4 CSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPE 63
Query: 76 CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVT 135
++ G++ + V NL HL GNVY++++ EE+ + A++ N RW+ GR + E PVT
Sbjct: 64 FKN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVT 122
Query: 136 DFREACCRQYEMGECTRSGFCNFMHL 161
++ A C +E+ +C R CNF+H+
Sbjct: 123 RWKMAICGLFEIQQCPRGKHCNFLHV 148
>gi|397606182|gb|EJK59239.1| hypothetical protein THAOC_20568 [Thalassiosira oceanica]
Length = 109
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 53 ISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEK 112
+ + + + +E + +F+ED + E K+G IE +++CDNLGDH++G+ Y KF EE+A
Sbjct: 7 VIQIDEAKAKEDFLSFYEDFYEELS-KFGRIEALHICDNLGDHMLGHAYCKFSEEEEAAD 65
Query: 113 AVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGF 155
A+N +N R++ GR + E SPV DFREA CR ++ C R GF
Sbjct: 66 ALNVMNGRYYDGRQMEVEFSPVLDFREARCRDFDEDSCRRGGF 108
>gi|303390771|ref|XP_003073616.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
gi|303302763|gb|ADM12256.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
Length = 245
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 8/172 (4%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEM 61
C FY K ACR+G C++ H P + +++ +Y+ P+N +S ++ E +
Sbjct: 7 TCLFYSKTNACRYGLECTKAHRIPIRGKVVVVKGMYLYPKNDPEST--------LSKESI 58
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
Q H D F+ED F E +YG I + + N L+GN+YI+F E+ A + V ++ R+
Sbjct: 59 QIHLDLFYEDWFSELSIRYGSIRRLVIASNSSSQLLGNIYIEFEEEKTALRCVEEIGKRY 118
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 173
+ GR + AEL + C E +C + C F+H +S +L L+
Sbjct: 119 YSGRRIAAELGNCYRIDDGMCTDNEKEKCEKGEKCGFIHSARVSTDLAEELF 170
>gi|189237330|ref|XP_973215.2| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 1, related sequence 2 [Tribolium
castaneum]
Length = 337
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY--INPQNSAKSADGSHLISNVTDEE 60
C F+ K ACR D CSR H KP S+ +L+ N Y + + + D S L + E
Sbjct: 168 CPFFQKTSACRFRDSCSRNHIKPGVSRILLIPNFYSHYSLEQTENEYDDSSL--EFENHE 225
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
H+ +FF DV E E ++G I + VC N HL GNVY+++ +A K+ N R
Sbjct: 226 TYSHFKDFFFDVLPEME-RFGRIRQFKVCCNRESHLRGNVYVEYSTTREAVKSFQVFNGR 284
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKP 163
W+GGR + E + ++ A C CNF+H+ P
Sbjct: 285 WYGGRQLSVEFCNIESWKSAIC----------GSSCNFLHVFP 317
>gi|302757309|ref|XP_002962078.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
gi|300170737|gb|EFJ37338.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
Length = 132
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 5 THCPFHTKTGACRFGPRCSRLHVYPEKSCTLLIKNMYTGPGLAWEHDEG----LECTDEE 60
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+++ ++ F+EDV E K+GE+ VC N HL GNVY+ ++ E DA A L+ R
Sbjct: 61 IEQKFEEFYEDVHSEFL-KFGELVNFKVCRNSSPHLRGNVYVHYQSEADAVAACLALSGR 119
Query: 121 WFGGRPVYAELS 132
++ + V A S
Sbjct: 120 FYASKQVLARYS 131
>gi|297739459|emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 27/185 (14%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADG-SHLISNV---- 56
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G IS
Sbjct: 202 HCPFHIKTGACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEKFISRFIWWS 261
Query: 57 ------------------TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVG 98
TDEE++ Y+ F+EDV E K+GEI VC N HL G
Sbjct: 262 SWFWPWLGWTCRRQNPLYTDEEVERCYEEFYEDVQTEFL-KFGEIVNFKVCRNGSFHLRG 320
Query: 99 NVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGF 155
NVY+ ++ + A A + +N ++ G+ V E VT ++ A C +Y C+
Sbjct: 321 NVYVHYKSLDSAVLAYHSINGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTA 380
Query: 156 CNFMH 160
CNF+H
Sbjct: 381 CNFIH 385
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYIN--PQNSAKSADGSHLISNVTDEE 60
CSF+ K GACR GDRCSR H + S T+++ ++ N + + + + +++
Sbjct: 34 CSFFIKTGACRFGDRCSRYHPPTSVSTTLVIPKMFSNFSMEQCMRDEYDTDICLEFDEKD 93
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
+ +F++DV E GE+ + VC N HL GNVY+++ E++ KA++ N R
Sbjct: 94 AYADFLSFYDDVLGEFR-ALGEVIQFKVCCNWEPHLRGNVYVQYNSEDECSKAISMFNGR 152
Query: 121 WFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
++ G+ + P+T ++ A C + C + CNF+H+
Sbjct: 153 YYAGKQLTCLYCPITKWKSAICGLFAKKRCPKGKHCNFLHV 193
>gi|168061106|ref|XP_001782532.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666017|gb|EDQ52684.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQ--TILLLNLYINPQNSAKSADGSHLISNVTDE 59
NC FY K G CR G RCSR+H P F++ T+L+ ++Y + + + TDE
Sbjct: 5 NCPFYIKTGVCRFGVRCSRLH--PVFNEACTLLMRSMYTGAGLALEQVES----LEYTDE 58
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
E+ + Y+ F++DV E ++GE+ VC N HL GNVY+ + +E A A N +N
Sbjct: 59 EVAQEYEEFYDDVHSE-FIQFGELVNFKVCRNGSPHLRGNVYVHYASQESAMLAYNHMNG 117
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMH 160
R++ + V ACC + C+ CNFMH
Sbjct: 118 RFYAKKQVVLPRGWKICDILACCFWSTVQTCSHGSACNFMH 158
>gi|242007963|ref|XP_002424784.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
gi|212508307|gb|EEB12046.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
Length = 408
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYIN---PQNSAKSADGSHLISNVTDE 59
C F+ K+GACR G++CSR H S T+L+ N Y + QN + D + +I D
Sbjct: 170 CLFFNKVGACRFGNQCSRNHQHFKISNTLLVSNFYSHFTLEQNKSSEYD-TDIILEYEDS 228
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+M H+ F+ D+ E + K+G++ + VC N HL GNVYI+++ ++DA A +
Sbjct: 229 DMYSHFKEFYTDIVPEFK-KFGDLTMVKVCCNSEPHLRGNVYIEYKHKKDALLAYKEFQG 287
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
RW+G D+ A C + C + CNF+H+
Sbjct: 288 RWYG------------DWGGAVCGDFARRRCLKGKSCNFLHV 317
>gi|332026662|gb|EGI66771.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Acromyrmex echinatior]
Length = 478
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD-GSHLISNVTDEEM 61
C F+ K G CR+G+ CS+ H K S+ IL+ Y + A+ + + E
Sbjct: 177 CPFFSKTGVCRYGNACSKNHRKFFLSRVILIPGFYSHFSLEKNLAEYDTDVALEFERSET 236
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
H+ F+EDV E E +G I+ + C N HL GNVY+++ E +A +A +L RW
Sbjct: 237 LHHFYEFYEDVITELES-FGRIKTLKCCCNKEIHLRGNVYVEYYTEREAARAWRNLKGRW 295
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTR-SGFCNFMH 160
+ G+ + E T +R A C + +C + S FCNF+H
Sbjct: 296 YAGKQLNCEFVNFTSWRGAVC---GINKCPKGSKFCNFLH 332
>gi|256070881|ref|XP_002571770.1| arylformamidase [Schistosoma mansoni]
gi|353228669|emb|CCD74840.1| putative kynurenine aminotransferase [Schistosoma mansoni]
Length = 967
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 38/208 (18%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPT-----------------------FSQTILLLNL--- 36
CSF+ K GACR+G CSR+H P+ + L+L +
Sbjct: 175 CSFFRKTGACRYGFLCSRLHQYPSRYDDIIESFNIADDQDVGGLDEPIDNSCLVLQIPKM 234
Query: 37 ----YINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNL 92
+++ + S D + V + ++ Y F+ DV +E E ++G+I + C NL
Sbjct: 235 FTHYHLDLTKNTSSEDQDSGL-EVDESQLLSDYHEFYHDVRMELESRWGKISVIRTCRNL 293
Query: 93 GDHLVGNVYIKFRREEDAE-KAVNDLNNRWFGGRPVYAELSPV-TDFREACCRQYEMGEC 150
DHL G+VY++F R A A N RWF GR + + + +REA C Y G+C
Sbjct: 294 ADHLRGSVYVEFSRGPSAAWDAAEACNGRWFAGRKLTCTVVRLGGGWREAICGLYHRGKC 353
Query: 151 TRSGF-CNFMH--LKP--ISRELRRYLY 173
+ CNF+H L P S +L++ L+
Sbjct: 354 PKGDLHCNFLHVFLNPGETSNDLQKTLW 381
>gi|297745616|emb|CBI40781.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 37/103 (35%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y
Sbjct: 26 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY----------------------- 62
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIK 103
+ K+GEIE +NVCDNL DH++G V ++
Sbjct: 63 --------------QQLGKFGEIESLNVCDNLADHMIGAVLLR 91
>gi|119629908|gb|EAX09503.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_c [Homo
sapiens]
Length = 128
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKF 104
MQEHYD FFE+VF E E+KYGE+EEMNVCDNLGDHLVGNVY+K
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKV 44
>gi|149035842|gb|EDL90509.1| similar to U2af1-rs2 (predicted) [Rattus norvegicus]
Length = 337
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
++EE + + +F+ DV E + G++ + V NL HL GNVY++++ EED + A +
Sbjct: 24 SEEETYQQFLDFYYDVLPEFKS-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSV 82
Query: 117 LNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
N RW+ GR + E PVT ++ A C +E+ +C R CNF+H+
Sbjct: 83 FNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 127
>gi|307171941|gb|EFN63567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Camponotus floridanus]
Length = 507
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 6/160 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSAD-GSHLISNVTDEEM 61
C F+ K G CR+GD CS+ H + S+ IL+ Y + SA+ + + + E
Sbjct: 175 CPFFTKTGVCRYGDMCSKNHRRVFLSKVILIPGFYTHFSLEKNSAEYDTDIGLEFENSET 234
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
H+ F+EDV ++ + +G+I+ + C N HL GN+Y+++ E +A +A L
Sbjct: 235 WHHFRKFYEDV-IKILELFGKIKTLKCCCNTELHLRGNLYVEYYTEREAARAWRHLKGYT 293
Query: 122 FGGRPVYAELSPVTDFREACCRQYEMGECTR-SGFCNFMH 160
+ + + E +T +R+A C M +C + S CNF+H
Sbjct: 294 YANKQLNCEFVNLTSWRKAIC---GMTKCPKGSKACNFLH 330
>gi|195386482|ref|XP_002051933.1| GJ24411 [Drosophila virilis]
gi|194148390|gb|EDW64088.1| GJ24411 [Drosophila virilis]
Length = 449
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP----QNSAKSADGSHLISNVTD 58
C FY + CR+G C+ H +P ++ +L+ + Y +P + K G+ +T
Sbjct: 170 CEFYTRTNCCRYGHSCTFNHRRPMLAKILLIRHFYTHPLLQVDATHKEYAGADEHLELTQ 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
+++ YD FF+D E E K+G+I N HL G+V++++ E A +A +L
Sbjct: 230 HDLRADYDEFFKDATGELE-KFGKIVNFRTVCNTLPHLRGHVFVEYAHERFALRAFINLQ 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
R++ R + E S + +R A C +C + C ++HL
Sbjct: 289 GRYYAARRLNVEFSNLKAWRGAVCGLSLTRKCPKGYSCGYLHL 331
>gi|302775180|ref|XP_002971007.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
gi|300160989|gb|EFJ27605.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
Length = 132
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 76/132 (57%), Gaps = 5/132 (3%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 5 THCPFHTKTGACRFGPRCSRLHVYPEKSCTLLIKNMYTGPGLAWEHDEG----LECTDEE 60
Query: 61 MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
++E ++ F+EDV E K+GE+ VC N HL GNVY+ ++ EEDA A L+ R
Sbjct: 61 IEEKFEEFYEDVHSEFL-KFGELVNFKVCRNSSPHLRGNVYVHYQSEEDAVAACLALSGR 119
Query: 121 WFGGRPVYAELS 132
++ + V A S
Sbjct: 120 FYASKQVLARYS 131
>gi|325187017|emb|CCA21561.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 341
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 1 VNCSFYFKIGACRHGD-RCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE 59
++C FY + G C G RC R H P S+ +LL + ++ DGS +
Sbjct: 160 ISCPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHFCLD----EILVDGS---ATELLY 212
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
EM V VE + NL HL GNVYI+F EE A++A L
Sbjct: 213 EMSLELSRIVSLVRVE------------LVQNLASHLRGNVYIEFESEEGAKQAWQALRV 260
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGF-CNFMHLKPISRE 167
R++ GR + AEL P+ ++ + C + G C + CN++HL P +R+
Sbjct: 261 RYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHLNPYNRK 309
>gi|325187019|emb|CCA21563.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 301
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 1 VNCSFYFKIGACRHGD-RCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE 59
++C FY + G C G RC R H P S+ +LL + ++ DGS +
Sbjct: 120 ISCPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHFCLD----EILVDGS---ATELLY 172
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
EM V VE + NL HL GNVYI+F EE A++A L
Sbjct: 173 EMSLELSRIVSLVRVE------------LVQNLASHLRGNVYIEFESEEGAKQAWQALRV 220
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGF-CNFMHLKPISRE 167
R++ GR + AEL P+ ++ + C + G C + CN++HL P +R+
Sbjct: 221 RYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHLNPYNRK 269
>gi|325187018|emb|CCA21562.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 314
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 1 VNCSFYFKIGACRHGD-RCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE 59
++C FY + G C G RC R H P S+ +LL + ++ DGS +
Sbjct: 133 ISCPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHFCLD----EILVDGS---ATELLY 185
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
EM V VE + NL HL GNVYI+F EE A++A L
Sbjct: 186 EMSLELSRIVSLVRVE------------LVQNLASHLRGNVYIEFESEEGAKQAWQALRV 233
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGF-CNFMHLKPISRE 167
R++ GR + AEL P+ ++ + C + G C + CN++HL P +R+
Sbjct: 234 RYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHLNPYNRK 282
>gi|443697246|gb|ELT97781.1| hypothetical protein CAPTEDRAFT_161525 [Capitella teleta]
Length = 346
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 50 SHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREED 109
S L D ++ H+ F+EDV E G + + VC N HL GNVYI++ E D
Sbjct: 17 SDLSLEYEDSDVMRHFREFYEDVTPEFR-ALGRLVQFKVCCNYEPHLRGNVYIQYESESD 75
Query: 110 AEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
AE+ ++ N RW+ GR + + S VT ++ A C + +C + CNF+H+
Sbjct: 76 AERCLSAFNGRWYAGRQLSCQYSAVTQWKNAICGLFSRKKCPKGRACNFLHV 127
>gi|195433120|ref|XP_002064563.1| GK23757 [Drosophila willistoni]
gi|194160648|gb|EDW75549.1| GK23757 [Drosophila willistoni]
Length = 589
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ + CR G CS H +P ++ +L+ + + +P S+D +T+ +++
Sbjct: 173 CEFFTRTNCCRFGHTCSHNHRRPMLAKILLIRHFFSHPLLKLTSSDD---YLELTEHDLR 229
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
+ YD FF D E E K+G+I N D+L G+V++++ +E A +A +L R++
Sbjct: 230 DSYDEFFHDAVAELE-KFGKIVNFRALRNTLDYLRGHVFVEYAQERHALRAFINLQGRYY 288
Query: 123 GGRPVYAELSPVTDFREACCRQYEMGECTRSGF-CNFMHL 161
R + E S + +R A C G+ C ++HL
Sbjct: 289 ASRQLNVEFSNLKGWRGAVC-----------GYSCAYLHL 317
>gi|198475533|ref|XP_001357071.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
gi|198138864|gb|EAL34137.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
Length = 448
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISN----VTD 58
C F+ + +CR+G C+ H +P + +L+ + + + K + ++ +T+
Sbjct: 169 CEFFTRTNSCRYGHSCTFNHRRPMLGRILLIRHFFSHSLLHDKKVHKEYASADEGLEMTE 228
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
+++ YD FF D E E K+G+I N +HL G+V++++ E+ A +A +L
Sbjct: 229 HDLRSDYDEFFNDAVTELE-KFGKIVNFRALRNTLEHLSGHVFVEYANEKCALRAFINLQ 287
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
R++ R + E S + +R A C +C + C ++HL
Sbjct: 288 GRYYASRRLNVEFSNLHTWRGAVCGLSLTRKCPKGNSCGYLHL 330
>gi|195159884|ref|XP_002020806.1| GL14474 [Drosophila persimilis]
gi|194117756|gb|EDW39799.1| GL14474 [Drosophila persimilis]
Length = 448
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISN----VTD 58
C F+ + +CR+G C+ H +P + +L+ + + + K + + +T+
Sbjct: 169 CEFFTRTNSCRYGHSCTFNHRRPMLGRILLIRHFFSHSLLHDKKVHKEYASGDEGLEMTE 228
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
+++ YD FF D E E K+G+I N +HL G+V++++ E+ A +A +L
Sbjct: 229 HDLRSDYDEFFNDAVTELE-KFGKIVNFRALRNTLEHLSGHVFVEYANEKCALRAFINLQ 287
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
R++ R + E S + +R A C +C + C ++HL
Sbjct: 288 GRYYASRRLNVEFSNLHTWRGAVCGLSLTRKCPKGNSCGYLHL 330
>gi|195576588|ref|XP_002078157.1| GD23299 [Drosophila simulans]
gi|194190166|gb|EDX03742.1| GD23299 [Drosophila simulans]
Length = 492
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY----INPQNSAKSADGSHLISNVTD 58
C F+ + CR+G C+ H +P + +L+ + + + + + K D + +T+
Sbjct: 170 CEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRWAHKEYDSAEEHLELTE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
++++ YD FF D VE K+G I N +HL G+V++++ E A +A +L
Sbjct: 230 QDLRHDYDEFFNDA-VEELGKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQ 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
R++ + + E S + +R A C +C + C ++HL
Sbjct: 289 GRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNGCGYLHL 331
>gi|326523703|dbj|BAJ93022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
TDEE+++ Y+ F+EDV E K+GE+ VC N HL GNVY+ ++ + A A N
Sbjct: 3 TDEEIEQSYEEFYEDVHTEFL-KFGELVNFKVCRNGSFHLRGNVYVHYKALDSALLAYNS 61
Query: 117 LNNRWFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+N R+F G+ + E +T ++ A C +Y C+ CNF+H
Sbjct: 62 MNGRYFAGKQITCEFVALTKWKSAICGEYMRSRFKTCSHGVACNFIH 108
>gi|405978554|gb|EKC42934.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Crassostrea gigas]
Length = 729
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 2 NCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYIN---PQNSAKSADGSHLISNVTD 58
C F+ K G CR GDRCSR H P S T+L ++Y + Q D + + D
Sbjct: 513 TCMFFSKTGTCRFGDRCSRGHPHPEVSNTLLFHSMYNHFELEQGLKDDLDTTDVTLEYDD 572
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRR 106
E+ +++ +F+ D+ E + YG++ ++ VC+N HL GNVY++++R
Sbjct: 573 GELYQNFQDFYLDIVPEFRN-YGKLSQVKVCNNYEPHLRGNVYVQYKR 619
>gi|123474570|ref|XP_001320467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903273|gb|EAY08244.1| hypothetical protein TVAG_404120 [Trichomonas vaginalis G3]
Length = 225
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Query: 3 CSFYFKIGACRH---GDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDE 59
C Y K GAC + C H S+ ++ +LY NP A + + +
Sbjct: 27 CQIYEKTGACPNDYFPKCCPFKHPIKLMSRCLVFHHLYPNPDYFASFLPKNEQ-TMIKTR 85
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+Q D+FF DV+ E + ++G ++++ + NL +HL GNVY++F ++A L
Sbjct: 86 NLQSMIDSFFLDVYAEFK-QFGNVQDIVIASNLTEHLYGNVYVRFNEPDEALACHKALQG 144
Query: 120 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRS 179
R++ GR V + L C + G+C C ++H ISR++ + R S
Sbjct: 145 RFYAGRKVTSSLIFFDKLSSLICVSKQSGKCFHGQCCPYVHPLQISRDVFNQAFPRILLS 204
Query: 180 S 180
+
Sbjct: 205 T 205
>gi|195114372|ref|XP_002001741.1| GI17015 [Drosophila mojavensis]
gi|193912316|gb|EDW11183.1| GI17015 [Drosophila mojavensis]
Length = 170
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP------QNSAKSADGSHLISNV 56
C FY + CR+G+ C+ H +P ++ +L+ + + +P + ++ HL +
Sbjct: 26 CEFYTRTNCCRYGNSCTFNHRRPMLAKILLIRHFFTHPLLQVGETHKEYASTDEHL--EL 83
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
T+++++ YD FF D E + K+G+I N HL G+V++++ +E A +A +
Sbjct: 84 TEQDLRNDYDEFFNDAIGELQ-KFGKILNFRAVRNTLPHLRGHVFVEYAQERFALRAFVN 142
Query: 117 LNNRWFGGRPVYAELSPVTDFREACC 142
L R++ R + E S + +R A C
Sbjct: 143 LQGRYYASRRLQVEFSNLKGWRGAVC 168
>gi|221472666|ref|NP_608857.2| CG3294, isoform A [Drosophila melanogaster]
gi|220901945|gb|AAF50982.3| CG3294, isoform A [Drosophila melanogaster]
Length = 456
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY----INPQNSAKSADGSHLISNVTD 58
C F+ + CR+G C+ H +P + +L+ + + + + + K + +T+
Sbjct: 170 CEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTHKEYASAEEHLELTE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
++++ YD FF DV E K+G I N +HL G+V++++ E A +A +L
Sbjct: 230 QDLRHDYDEFFNDVVEELR-KFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQ 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
R++ + + E S + +R A C +C + C ++HL
Sbjct: 289 GRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNDCGYLHL 331
>gi|224129496|ref|XP_002328731.1| predicted protein [Populus trichocarpa]
gi|222839029|gb|EEE77380.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
TDEE++ Y+ F+EDV E KYGEI VC N HL GNVY+ ++ + A A +
Sbjct: 19 TDEEVECSYEEFYEDVHTEFL-KYGEIVNFKVCKNGSFHLRGNVYVHYKSLDSAILAYHS 77
Query: 117 LNNRWFGGRPVYAELSPVTDFREACCRQY---EMGECTRSGFCNFMH 160
+N R+F G+ V E +T ++ A C ++ + C+ CNF+H
Sbjct: 78 INGRYFAGKQVKCEFINLTRWKVAICGEFMKSRLKTCSHGSACNFIH 124
>gi|13235102|emb|CAC33544.1| U2snRNP auxiliary factor small subunit (truncated) [Gallus
gallus]
Length = 49
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 32/34 (94%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLL 34
VNCSFYFKIGACRHGDRCSR+HNKPTFSQ +LL
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKPTFSQEAMLL 49
>gi|344249745|gb|EGW05849.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Cricetulus griseus]
Length = 138
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D S++ ++
Sbjct: 32 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSLEYSE 91
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 105
EE + + +F+ DV E ++ G++ + V NL HL GNVY++++
Sbjct: 92 EETYQQFLDFYHDVLPEFKN-VGKVVQFKVSCNLEPHLRGNVYVQYQ 137
>gi|195035213|ref|XP_001989072.1| GH11518 [Drosophila grimshawi]
gi|193905072|gb|EDW03939.1| GH11518 [Drosophila grimshawi]
Length = 312
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP-------QNSAKSADGSHLISN 55
C FY + CR+G C+ H +P ++ +L+ + + +P +AD +HL
Sbjct: 168 CEFYTRTNCCRYGHSCTFNHRRPMLAKILLIRHFFTHPLLQIGDTHKEYANAD-AHL--E 224
Query: 56 VTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVN 115
T ++++ YD FF DV E + K+G+I V N HL G+V++++ +E A +A
Sbjct: 225 QTPQDLRADYDAFFNDVVDELQ-KFGKIINFRVVCNTLPHLRGHVFVEYAQERYALRAFV 283
Query: 116 DLNNRWFGGRPVYAELSPVTDFREACC 142
+L R++ R + E S + +R A C
Sbjct: 284 NLQGRYYASRRLNVEFSNLKAWRGAVC 310
>gi|357445231|ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355481941|gb|AES63144.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 1146
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 52 LISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE 111
L + TDEE++ ++ F+EDV E K+GEI VC N HL GNVY++++ + A
Sbjct: 2 LTLSYTDEEVERCFEEFYEDVHTEFL-KFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSAL 60
Query: 112 KAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMG---ECTRSGFCNFMH 160
A N +N R+F G+ V + +T ++ A C +Y C+ CNF+H
Sbjct: 61 LAYNSVNGRYFAGKQVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIH 112
>gi|157141689|ref|XP_001647741.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit
related-protein 2 [Aedes aegypti]
gi|108867907|gb|EAT32409.1| AAEL015434-PA, partial [Aedes aegypti]
Length = 296
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 31 ILLLNLYINPQNSAKSADGSHLISNVT--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNV 88
+LL N + +P + L S++ D+E+ Y FF DV E E +G I V
Sbjct: 2 LLLPNFFAHPALDHQQHPEYGLDSSIEFDDDELYRSYTEFFMDVIEEFES-FGPISGFFV 60
Query: 89 CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMG 148
N HL GNVY+++ + DA KA +N R++ + + E + A C +E
Sbjct: 61 TRNFEPHLRGNVYVQYEKVRDAAKAYQRMNGRFYASKQLRVEFRAPIVWTAAVCGLFERS 120
Query: 149 ECTRSGFCNFMHL--KPISR 166
C + CN++HL P+++
Sbjct: 121 RCQKGKSCNYLHLLVNPVAK 140
>gi|358334074|dbj|GAA52523.1| kynurenine---oxoglutarate transaminase [Clonorchis sinensis]
Length = 1330
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQT-----------------ILLLNLYINPQNSAK 45
CSF+ K G CR+G CSR H+ P ++ + + +++ +P
Sbjct: 455 CSFFRKTGTCRYGFSCSRRHDYPQRIESAVEEDAAAEDGDHSCIVLCIPHMFTHPHLPPP 514
Query: 46 SADGSHLISNVT---DEE--MQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNV 100
A L + T DEE + Y F+ DV E E ++G + + C N +HL G V
Sbjct: 515 DATSGELEDSGTLSADEESVLCADYVEFYHDVRDELEARWGRVAALRTCRNRTEHLRGTV 574
Query: 101 YIKFRREEDAE-KAVNDLNNRWFGGRPVYAELSPV-TDFREACCRQYEMGECTR-SGFCN 157
Y++F A A RWF GR + + + +REA C + C + CN
Sbjct: 575 YVEFALGSGATWDAAEACAGRWFAGRQLTCMVVRLGGGWREAICGLHHRRRCPKGDSKCN 634
Query: 158 FMHL 161
F+H+
Sbjct: 635 FLHV 638
>gi|308161619|gb|EFO64057.1| Splicing factor U2AF subunit, putative [Giardia lamblia P15]
Length = 191
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 20/163 (12%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ G CRHG C H T + ++L N+ Q+ K+ E+
Sbjct: 13 CRFHECTGYCRHGTECRNRHALFTGGRMLMLRNIIPRIQHKDKA-------------ELY 59
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
YD+ FED+F+ + G +++ V +N +HL G VY ++ + A+ + L+N ++
Sbjct: 60 RFYDHCFEDIFLRLA-QLGPMQDFLVAENT-NHLAGTVYAQYTSQVAAQDVASKLSNTYY 117
Query: 123 GGRPVYAELSPVTDFREACCR-QYEMG----ECTRSGFCNFMH 160
G PV AE+ V + CR +Y G +C C+F+H
Sbjct: 118 AGFPVKAEVIGVESIHKTLCRDEYASGKSGNKCAHGLSCSFVH 160
>gi|159112951|ref|XP_001706703.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
gi|157434802|gb|EDO79029.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
Length = 193
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ G CRHG C H T + ++L N+ Q+ K+ E+
Sbjct: 15 CRFHECTGYCRHGTECRNRHALFTDGRMLMLRNIIPRIQHKDKA-------------ELY 61
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
+ YD+ FED+F+ + G +++ V +N +HL G VY ++ + A+ + L+N ++
Sbjct: 62 KFYDHCFEDIFLRLA-QLGPMQDFLVAENT-NHLAGTVYAQYASQVAAQDVASKLSNTYY 119
Query: 123 GGRPVYAELSPVTDFREACCR-QYEMG----ECTRSGFCNFMH 160
G PV AE+ V + CR +Y G +C C+F+H
Sbjct: 120 AGFPVKAEVIGVESIHKTLCRDEYASGKSGSKCAHGLSCSFVH 162
>gi|194856250|ref|XP_001968707.1| GG25018 [Drosophila erecta]
gi|190660574|gb|EDV57766.1| GG25018 [Drosophila erecta]
Length = 447
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYIN--------PQNSAKSADGSHLIS 54
C F+ + CR+G C+ H +P ++ ILL+ + N P SA+ HL
Sbjct: 170 CEFFSRTNCCRYGHACTFNHRRPMLAR-ILLIRHFFNHSMLQERRPHKEYASAE-EHL-- 225
Query: 55 NVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 114
+T+++++ YD FF D E K+G I N +HL G+V++++ E A +A
Sbjct: 226 ELTEQDLRHDYDEFFNDAVEELR-KFGTIVNFRTVRNTVEHLRGHVFVEYTNERSALRAF 284
Query: 115 NDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
+L R++ + + E S + +R A C C ++HL
Sbjct: 285 TNLQGRYYASKKLNVEFSNLKTWRGAVC----------GNGCGYLHL 321
>gi|195342524|ref|XP_002037850.1| GM18489 [Drosophila sechellia]
gi|194132700|gb|EDW54268.1| GM18489 [Drosophila sechellia]
Length = 447
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY----INPQNSAKSADGSHLISNVTD 58
C F+ + CR+G C+ H +P + +L+ + + + + + K D + +T+
Sbjct: 170 CEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRWTHKEYDSAEEHLELTE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
++++ YD FF D E K+G I N +HL G+V++++ E A +A +L
Sbjct: 230 QDLRHDYDEFFNDAVEELR-KFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQ 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
R++ + + E S + +R A C C ++HL
Sbjct: 289 GRYYASKRLNVEFSNLRTWRGAVC----------GNGCGYLHL 321
>gi|195471335|ref|XP_002087960.1| GE18306 [Drosophila yakuba]
gi|194174061|gb|EDW87672.1| GE18306 [Drosophila yakuba]
Length = 496
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISN----VTD 58
C F+ + CR+G C+ H +P ++ +L+ + + + + A + + +T+
Sbjct: 170 CEFFSRTNCCRYGHACTFNHRRPMLARILLIRHFFNHSMLQERRAHKEYAAAEEHLELTE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
++++ YD FF D E E K+G I N +HL G+V++++ E A +A +L
Sbjct: 230 QDLRHDYDEFFRDAVEELE-KFGTIVNFRTVRNTLEHLRGHVFVEYTSERSALRAFTNLQ 288
Query: 119 NRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
R++ + + E S + +R A C C ++HL
Sbjct: 289 GRYYASKRLNVEFSNLRTWRGAVC----------GNGCGYLHL 321
>gi|21483354|gb|AAM52652.1| GM14666p [Drosophila melanogaster]
Length = 321
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY----INPQNSAKSADGSHLISNVTD 58
C F+ + CR+G C+ H +P + +L+ + + + + + K + +T+
Sbjct: 177 CEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTHKEYASAEEHLELTE 236
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
++++ YD FF DV VE K+G I N +HL G+V++++ E A +A +L
Sbjct: 237 QDLRHDYDEFFNDV-VEELRKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQ 295
Query: 119 NRWFGGRPVYAELSPVTDFREACC 142
R++ + + E S + +R A C
Sbjct: 296 GRYYASKRLNVEFSNLRTWRGAVC 319
>gi|253746096|gb|EET01601.1| Splicing factor U2AF subunit, putative [Giardia intestinalis ATCC
50581]
Length = 191
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQ 62
C F+ G CRHG C H T + ++L N+ Q + ++ E+
Sbjct: 13 CRFHECTGYCRHGTECRNRHTLFTGGRMLMLRNIIPRIQYTDRA-------------ELY 59
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
+ YD+ FED+F+ + G +++ V +N +HL G VY ++ + A+ A + L++ ++
Sbjct: 60 KFYDHCFEDIFLRLV-QLGPLQDFLVAENT-NHLAGTVYAQYASQVAAQDAASKLSDTYY 117
Query: 123 GGRPVYAELSPVTDFREACCR-QYEMG----ECTRSGFCNFMH 160
G PV AE+ V + + CR +Y G +C C+F+H
Sbjct: 118 AGFPVKAEVIGVENVHKMLCRDEYASGKPGSKCAHGLSCSFVH 160
>gi|170038926|ref|XP_001847298.1| U2 snrnp auxiliary factor [Culex quinquefasciatus]
gi|167862539|gb|EDS25922.1| U2 snrnp auxiliary factor [Culex quinquefasciatus]
Length = 398
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP----QNSAKSADGSHLISNVTD 58
C F+ KIG CR+G RCS H P SQ +L+ N + +P +N+ + S + +
Sbjct: 167 CGFFGKIGVCRYGIRCSSNHPTPGLSQLLLIPNFFAHPALDDRNNPEYGTDSGI--EFDE 224
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKF---RREEDAE-KAV 114
+E+ Y+ FF D+ E E +G I + VC N HL GNV+I++ R +D E A
Sbjct: 225 DELYRCYNEFFHDIIAEFES-FGLIRYIFVCRNHAVHLRGNVFIQYDSVRSWDDIEIPAK 283
Query: 115 NDLNNRW 121
N RW
Sbjct: 284 QRTNWRW 290
>gi|28574034|ref|NP_787976.1| CG3294, isoform B [Drosophila melanogaster]
gi|28380246|gb|AAO41150.1| CG3294, isoform B [Drosophila melanogaster]
Length = 314
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY----INPQNSAKSADGSHLISNVTD 58
C F+ + CR+G C+ H +P + +L+ + + + + + K + +T+
Sbjct: 170 CEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTHKEYASAEEHLELTE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
++++ YD FF DV VE K+G I N +HL G+V++++ E A +A +L
Sbjct: 230 QDLRHDYDEFFNDV-VEELRKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQ 288
Query: 119 NRWFGGRPVYAELSPVTDFREACC 142
R++ + + E S + +R A C
Sbjct: 289 GRYYASKRLNVEFSNLRTWRGAVC 312
>gi|194766159|ref|XP_001965192.1| GF21431 [Drosophila ananassae]
gi|190617802|gb|EDV33326.1| GF21431 [Drosophila ananassae]
Length = 314
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 3 CSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY----INPQNSAKSADGSHLISNVTD 58
C + + CR+G C+ H +P S+ +L+ + + + + K + +T+
Sbjct: 170 CELFSRTNCCRYGHSCTFNHTRPMLSRILLIRHFFSHSLLQERRVHKEYASADEELELTE 229
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
+++ +D FFED E E K+G I N +HL G+V++++ E A +A +L
Sbjct: 230 HDLRSDFDEFFEDAIKELE-KFGSIVNFRAVRNTLEHLRGHVFVEYGHERSALRAFINLQ 288
Query: 119 NRWFGGRPVYAELSPVTDFREACC 142
R++ R + E S + +R A C
Sbjct: 289 GRYYASRRLNVEFSNLKTWRGAVC 312
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 13/116 (11%)
Query: 17 RCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTD--EEMQEHYDN-FFEDVF 73
+ +R PTF++ + N+ PQ S L+ N+ D EE + +D +DV
Sbjct: 331 KLARTEAPPTFTEPVARPNI---PQAMQSR---SVLLKNMFDPEEETERDWDKELADDVK 384
Query: 74 VECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
VECE+KYG++E + V G +Y+KF E A++A+ LN RWFGGR V A
Sbjct: 385 VECENKYGKVEAIKVER----ETQGEIYLKFDSIESAKQAIQGLNGRWFGGRQVSA 436
>gi|325187016|emb|CCA21560.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 344
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 86 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 145
+ + NL HL GNVYI+F EE A++A L R++ GR + AEL P+ ++ + C +
Sbjct: 230 VELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSF 289
Query: 146 EMGECTRSG-FCNFMHLKPISRE 167
G C + CN++HL P +R+
Sbjct: 290 VKGACAQGNENCNYLHLNPYNRK 312
>gi|325187020|emb|CCA21564.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 304
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 86 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 145
+ + NL HL GNVYI+F EE A++A L R++ GR + AEL P+ ++ + C +
Sbjct: 190 VELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSF 249
Query: 146 EMGECTRSG-FCNFMHLKPISRE 167
G C + CN++HL P +R+
Sbjct: 250 VKGACAQGNENCNYLHLNPYNRK 272
>gi|302785351|ref|XP_002974447.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
gi|300158045|gb|EFJ24669.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
Length = 56
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 38/56 (67%)
Query: 117 LNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYL 172
LN R++ GR + AELSPVTDFREA CRQ E G C+R CNF+ L SR L R L
Sbjct: 1 LNGRFYSGRSIAAELSPVTDFREASCRQEEQGGCSRGRCCNFLDLYHPSRALMRAL 56
>gi|156379393|ref|XP_001631442.1| predicted protein [Nematostella vectensis]
gi|156218482|gb|EDO39379.1| predicted protein [Nematostella vectensis]
Length = 361
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 53 ISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEK 112
+ + D E E Y+ FF DV E E K G++ + C N HL GNVY++F+ EE +
Sbjct: 3 VHHYDDHESFERYEEFFNDVLPEFE-KAGKVVQFKACCNYEPHLRGNVYVQFKDEESCAR 61
Query: 113 AVNDLNNRWFGGRPVYAELSPVTDFREACCRQY 145
A N RW+ + + E SPVT ++ A C ++
Sbjct: 62 AFAAFNGRWYAQKQLSCEFSPVTRWKSAICDRF 94
>gi|413937280|gb|AFW71831.1| hypothetical protein ZEAMMB73_658558 [Zea mays]
Length = 272
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G TDEE
Sbjct: 179 AHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALEQDEGLEF----TDEE 234
Query: 61 MQEHYDNFFEDVFVECEDKYGEI 83
+++ Y+ F+EDV E K+GE+
Sbjct: 235 IEQSYEEFYEDVHTEF-LKFGEL 256
>gi|140053486|gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliary factor small
subunit [Medicago truncatula]
Length = 584
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
TDEE++ ++ F+EDV E K+GEI VC N HL GNVY++++ + A A N
Sbjct: 5 TDEEVERCFEEFYEDVHTEFL-KFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNS 63
Query: 117 LNNRWFGGRPVYAELSPVTDFREACCRQYEMG---ECTRSGFCNFMH 160
+N R+F G+ V + +T ++ A C +Y C+ CNF+H
Sbjct: 64 VNGRYFAGKQVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIH 110
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 58 DEEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
DEE + +D + +DV ECE+KYG++ ++ V G +YIKF E AEKA+
Sbjct: 320 DEETERDWDKDLADDVRGECEEKYGKVLDLKV----EKESEGEIYIKFESVESAEKAIKG 375
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN RWFGG+ V A SP+ D
Sbjct: 376 LNGRWFGGKQVTA--SPIPD 393
>gi|294887769|ref|XP_002772227.1| splicing factor U2AF 35 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239876261|gb|EER04043.1| splicing factor U2AF 35 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 53
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY 37
VNC FYFKIG CRHGD+CSR HN+P SQT+LL +Y
Sbjct: 16 VNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMY 52
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 28/113 (24%)
Query: 23 NKPTFSQ-----TILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYD-NFFEDVFVEC 76
NKPT Q ++LL N++ +P+ EE + +D + EDV EC
Sbjct: 481 NKPTIPQAMQSRSVLLKNMF-DPE-----------------EETERDWDKDLAEDVKGEC 522
Query: 77 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDKYG+++ + V G +Y+KF + A+ A+ LN RWFGGR V A
Sbjct: 523 EDKYGQVDAIKVEQET----QGKIYVKFNSIDSAKNAIQGLNGRWFGGRQVSA 571
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 28/113 (24%)
Query: 23 NKPTFSQ-----TILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYD-NFFEDVFVEC 76
NKPT Q ++LL N++ +P+ EE + +D + EDV EC
Sbjct: 481 NKPTIPQAMQSRSVLLKNMF-DPE-----------------EETERDWDKDLAEDVKGEC 522
Query: 77 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDKYG+++ + V G +Y+KF + A+ A+ LN RWFGGR V A
Sbjct: 523 EDKYGQVDAIKVEQET----QGEIYVKFNSIDSAKNAIQGLNGRWFGGRQVSA 571
>gi|239505105|gb|ACR78698.1| U2 small nuclear auxiliary factor 1 [Rimicaris exoculata]
Length = 53
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNL 36
VNCSFY K GACRH +RCSR HNKP +SQT+++ N+
Sbjct: 18 VNCSFYIKTGACRHSERCSRKHNKPQYSQTVVMQNM 53
>gi|42572579|ref|NP_974385.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
gi|332644432|gb|AEE77953.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
Length = 75
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY 37
VNC FYFKIG CR+GDRCSR++ KP+ S T+LL N Y
Sbjct: 16 VNCPFYFKIGVCRNGDRCSRLYTKPSISPTLLLSNTY 52
>gi|429243189|ref|NP_594422.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|380865416|sp|O13845.2|RSD1_SCHPO RecName: Full=RNA-binding protein rsd1
gi|347834186|emb|CAB10118.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe]
Length = 603
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC++KYG++ + V N +G +++KF + AEKA+ L+ RWFGGR + A
Sbjct: 530 QDVKEECDEKYGKVVHIAVVPNE----LGQIFVKFENADFAEKAITGLHQRWFGGRTIKA 585
Query: 130 ELSPVTDF 137
+ P TD+
Sbjct: 586 SILPETDY 593
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 17 RCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTD--EEMQEHYD-NFFEDVF 73
+ +RI + P Q I+ P + S L+ N+ D EE + +D + EDV
Sbjct: 347 KLARIDSAPVTQQPIM------KPTVAQPMTSKSVLMRNMFDPEEETEPAWDKDLAEDVK 400
Query: 74 VECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EC+ KYG ++ + V + G +Y++F + A+ A+N LN RWFGG+ + A
Sbjct: 401 TECQAKYGRVQHIKVEKDS----EGEIYVQFDTVDAAKAAINGLNGRWFGGKQISA 452
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 29 QTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEE 85
QT++ + P S L+ N+ + E + D + EDV ECEDKYG++E
Sbjct: 512 QTVITPPPVVRPNIPQTMQSRSVLLKNMFNPENETERDWDKDLAEDVKYECEDKYGKVEF 571
Query: 86 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+ V + G +Y+KF E A+ A+ LN RWFGG V A
Sbjct: 572 IKVEKDSQ----GEIYVKFDSVESAKNAIQGLNGRWFGGNQVSA 611
>gi|388583572|gb|EIM23873.1| splicing factor, CC1-like protein [Wallemia sebi CBS 633.66]
Length = 459
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 68 FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 127
EDV ECE+KYG+++E+ V D + G + +KF E AE A+N LN RWFGGR V
Sbjct: 385 LAEDVKTECENKYGKVQEIGV-DKESEE--GEIVVKFYTIESAEDAINGLNGRWFGGRQV 441
Query: 128 YA 129
A
Sbjct: 442 KA 443
>gi|197127860|gb|ACH44358.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 42
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKP 25
VNCSFYFKIGACRHGDRCSR+HNKP
Sbjct: 16 VNCSFYFKIGACRHGDRCSRLHNKP 40
>gi|359082061|ref|XP_003588255.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 130
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TD 58
NC FY K GACR GDRCSR HN PT S T+L+ +++ D +N+ ++
Sbjct: 32 ANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCGRDDYDPDANLEYSE 91
Query: 59 EEMQEHYDNFFEDVFVE 75
EE+ + + +F++DV E
Sbjct: 92 EEIYQQFLDFYDDVLPE 108
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 23/109 (21%)
Query: 23 NKPTF-SQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYD-NFFEDVFVECEDKY 80
N PT S+++LL N++ NP+ EE ++ +D +DV ECE+KY
Sbjct: 604 NIPTATSRSVLLKNMF-NPE-----------------EETEQGWDIELRDDVKGECEEKY 645
Query: 81 GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
G + + + + G++YI F A+KA+ LNNRWFGGR + A
Sbjct: 646 GPVLAIAIEK---ESTAGDIYITFDSVPSAQKAITGLNNRWFGGRQITA 691
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 23/109 (21%)
Query: 23 NKPTF-SQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYD-NFFEDVFVECEDKY 80
N PT S+++LL N++ NP+ EE ++ +D +DV ECE+KY
Sbjct: 604 NIPTATSRSVLLKNMF-NPE-----------------EETEQGWDIELRDDVKGECEEKY 645
Query: 81 GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
G + + + + G++YI F A+KA+ LNNRWFGGR + A
Sbjct: 646 GPVLAIAIEK---ESTAGDIYITFDSVPSAQKAITGLNNRWFGGRQITA 691
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 50 SHLISNVTD--EEMQEHYDN-FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRR 106
S L+ N+ D EE + +D EDV EC++KYG++E + V G +Y+KF
Sbjct: 270 SVLMKNMFDPEEETERDWDKELAEDVKGECQEKYGKVEAIKVEK----ETQGEIYVKFAT 325
Query: 107 EEDAEKAVNDLNNRWFGGRPVYA 129
+ A++AV LN RWFGGR + A
Sbjct: 326 IDSAKEAVQALNGRWFGGRQISA 348
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 23/113 (20%)
Query: 23 NKPT-FSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYD-NFFEDVFVECEDKY 80
N PT S+++LL N++ NP+ EE + +D +DV ECE+KY
Sbjct: 594 NIPTATSRSVLLKNMF-NPE-----------------EETERGWDMELRDDVKGECEEKY 635
Query: 81 GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 133
G + + + + + G +YI F A+KA+ LNNRWFGGR + A P
Sbjct: 636 GPVLAIAIEK---ESMGGEIYITFDSVASAQKAIAGLNNRWFGGRQITAAFIP 685
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 26/111 (23%)
Query: 24 KPT-----FSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECED 78
KPT S+ +LL N++ NPQ + G + I + D DV ECE+
Sbjct: 386 KPTPAVQMTSRCVLLKNMF-NPQEES----GDNWIRELED------------DVKAECEN 428
Query: 79 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
KYG++ ++V +N G+VYIKF E+A+ LN RWFGGR + A
Sbjct: 429 KYGKVLHIHVEENS----PGDVYIKFDNVVAGERAIQGLNGRWFGGRTISA 475
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 17/102 (16%)
Query: 28 SQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMN 87
S+++LL N++ P+ K +G + +TD DV ECEDKYG ++ +
Sbjct: 544 SRSVLLRNMFKEPELEEKE-NGPNWAKELTD------------DVKQECEDKYGLVDFIK 590
Query: 88 VCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
L G +Y+KF+ E A KA+ LN R+FGG+P+ A
Sbjct: 591 ----LEPDSQGEMYLKFKSIEAASKAIEGLNGRYFGGQPIQA 628
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 25/120 (20%)
Query: 12 CRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFE- 70
RH N PT S ++LN NP +EE + + E
Sbjct: 346 SRHAPAPVLKPNIPTASTRYVMLNNMFNP-----------------NEETDPDWVSDLEA 388
Query: 71 DVFVECEDKYGEIEEMNV-CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
D+ +ECE KYG +E + V D++G+ V++KF R AEKA++ LN RWFGG+ + A
Sbjct: 389 DIKIECE-KYGRVEHIKVNSDSMGE-----VFLKFDRVGSAEKAISALNGRWFGGKQITA 442
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 50 SHLISNV--TDEEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRR 106
S L+ N+ DEE ++ +D +DV ECE KYG++ + V + G +Y+KF
Sbjct: 473 SVLLKNMFDPDEETEKDWDRELAQDVKGECESKYGKVLAIKVEKDS----QGEIYVKFDS 528
Query: 107 EEDAEKAVNDLNNRWFGGRPVYA 129
+ A+KA+ LN RWFGGR V A
Sbjct: 529 IDYAQKAIQGLNGRWFGGRQVSA 551
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 50 SHLISNV--TDEEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRR 106
S L+ N+ DEE ++ +D +DV ECE KYG++ + V + G +Y+KF
Sbjct: 473 SVLLKNMFDPDEETEKDWDRELAQDVKGECESKYGKVLAIKVEKDS----QGEIYVKFDS 528
Query: 107 EEDAEKAVNDLNNRWFGGRPVYA 129
+ A+KA+ LN RWFGGR V A
Sbjct: 529 IDYAQKAIQGLNGRWFGGRQVSA 551
>gi|240274521|gb|EER38037.1| RNA splicing factor [Ajellomyces capsulatus H143]
Length = 537
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECEDKYG + + + N G++Y+KF R +
Sbjct: 443 LLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNT----QGDIYLKFDRVQ 498
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 499 GGENAIKGLNGRFFGGRQISAQ--PVVD 524
>gi|71003261|ref|XP_756311.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
gi|46096316|gb|EAK81549.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
Length = 640
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 22 HNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTD--EEMQEHYD-NFFEDVFVECED 78
HN+P+ + + + P +S S L+ N+ D EE + ++D + EDV EC+
Sbjct: 533 HNEPSPAASEATTTVQERPAGIPESTSTSLLLKNMFDPAEETEPNWDTDLAEDVKEECQA 592
Query: 79 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAE 130
KYG + ++V + G +Y+ F + + KA++ LN R+FGG+P+ A+
Sbjct: 593 KYGPVTSIHVEKDSA----GEIYVTFANLDASRKALDGLNGRFFGGKPISAQ 640
>gi|238601653|ref|XP_002395467.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
gi|215466258|gb|EEB96397.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
Length = 180
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 50 SHLISNVTD--EEMQEHYDN-FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRR 106
S L+ N+ D EE + +D +DV EC +KYG++ + V G +Y+KF
Sbjct: 90 SVLMKNMFDPGEETERDWDKELADDVKGECGEKYGKVTAIKVEK----ETQGEIYVKFDS 145
Query: 107 EEDAEKAVNDLNNRWFGGRPVYA 129
E A+KAV LN RWFGG+ V A
Sbjct: 146 IESAKKAVQGLNGRWFGGKQVTA 168
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 50 SHLISNVTD--EEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRR 106
S L+ N+ D EE ++ +D + +DV VECE+KYG + + V G +Y+KF
Sbjct: 343 SVLLKNMFDPAEETEKDWDKDLADDVKVECENKYGMVNFIKV----DKESQGEIYVKFDT 398
Query: 107 EEDAEKAVNDLNNRWFGGRPVYAELSP 133
+ A+KA+ LN R+FGGR V A P
Sbjct: 399 VDSAKKAIEGLNGRYFGGRQVTATFIP 425
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECEDKYG + + + N G++Y+KF R +
Sbjct: 490 LLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNT----QGDIYLKFDRVQ 545
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 546 GGENAIKGLNGRFFGGRQISAQ--PVVD 571
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECEDKYG + + + N G++Y+KF R +
Sbjct: 491 LLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNT----QGDIYLKFDRVQ 546
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 547 GGENAIKGLNGRFFGGRQISAQ--PVVD 572
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
+EE + +DV ECE+KYG + ++V N G++Y+KF R E A+
Sbjct: 476 AEEEGENWVKELEDDVRAECEEKYGHVVHISVDPNT----QGDIYLKFERVSGGENAIKG 531
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGGR + A+ PV D
Sbjct: 532 LNGRYFGGRQISAQ--PVVD 549
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECEDKYG + + + N G++Y+KF R +
Sbjct: 491 LLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNT----QGDIYLKFDRVQ 546
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 547 GGENAIKGLNGRFFGGRQISAQ--PVVD 572
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECEDKYG + + + N G++Y+KF R +
Sbjct: 474 LLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNS----QGDIYLKFDRVQ 529
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 530 GGENAIKGLNGRFFGGRQITAQ--PVVD 555
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 23 NKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEEMQEHYD-NFFEDVFVECEDK 79
N+P+ S + + P +S S L+ N+ EE + +D + EDV EC+ K
Sbjct: 541 NEPSASASEVTTVAQERPAGIPESTSTSLLLKNMFNPAEETEPDWDTDLAEDVKEECQAK 600
Query: 80 YGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 133
YG + ++V G +Y+ F + + KA++ LN R+FGG+P+ A+ P
Sbjct: 601 YGRVTSIHVEKES----AGEIYVTFADLDASRKALDGLNGRFFGGKPISAQYIP 650
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 25 PTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEEMQEHYD-NFFEDVFVECEDKYG 81
PT S+ + + P +S S L+ N+ EE ++ +D + EDV EC KYG
Sbjct: 563 PTISEATSAM-IQERPAGIPESTSTSLLLKNMFNPAEETEQGWDKDLAEDVKDECHAKYG 621
Query: 82 EIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 133
+ ++V + G VY+ F + + KA+ LN R+FGG+P+ A+ P
Sbjct: 622 AVTSIHVEKDS----AGEVYVTFANLDGSRKALEGLNGRFFGGKPISAQYIP 669
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
T EE + +DV ECE KYG + ++V N G G+VYIKF + E A+
Sbjct: 460 TQEEGDAWVKDLEDDVKAECEAKYGHVVHISVDPNSG----GDVYIKFEKIVGGENAIKG 515
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGGR + A PV D
Sbjct: 516 LNGRFFGGRQISA--LPVVD 533
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
T+EE + +DV ECE+KYG + V +L + G++Y+KF R + E A+
Sbjct: 476 TEEEGESWIKELEDDVRAECEEKYGHV----VHISLDPNSQGDIYLKFDRVQGGENAIKG 531
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGGR + A+ PV D
Sbjct: 532 LNGRFFGGRQISAQ--PVVD 549
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECEDKYG + + + N G++Y+KF R +
Sbjct: 472 LLRNMFDPAEEEGEAWIKELEDDVRAECEDKYGHVVHIALDPNS----QGDIYLKFDRVQ 527
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 528 GGENAIKGLNGRFFGGRQITAQ--PVVD 553
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 20/115 (17%)
Query: 24 KPT-----FSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFF----EDVFV 74
KPT S+ +LL N++ NPQ LI +E DN+ +DV
Sbjct: 371 KPTPAVQMTSRCVLLKNMF-NPQEYVFVLVFKFLIF------FRESGDNWIRELEDDVKA 423
Query: 75 ECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ECE+KYG++ ++V +N G+VYIKF E+A+ LN RWFGGR + A
Sbjct: 424 ECENKYGKVLHIHVEENS----PGDVYIKFDNVVAGERAIQGLNGRWFGGRTISA 474
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECEDKYG + + + N G++Y+KF R +
Sbjct: 472 LLRNMFDPAEEEGEAWIKELEDDVRAECEDKYGHVVHIALDPNS----QGDIYLKFDRVQ 527
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 528 GGENAIKGLNGRFFGGRQITAQ--PVVD 553
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 17 RCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTD--EEMQEHYDN-FFEDVF 73
+ +R + P + + N+ PQ S L+ N+ D EE + +D +DV
Sbjct: 292 KLARTDSAPLLPEPVARPNI---PQTMESR---SVLLKNMFDPEEESGDDWDKELADDVK 345
Query: 74 VECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ECE KYG++ + V G +Y+KF + A KAV LN RWFGG+ V A
Sbjct: 346 GECESKYGKVSAIKVEK----ETQGEIYVKFDAVDAARKAVQGLNGRWFGGKQVSA 397
>gi|331242737|ref|XP_003334014.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 88
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 58 DEEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
+EE ++ +D +DV ECE+KYG + + + + G++YI F A+KA+
Sbjct: 5 EEETEQGWDIELRDDVKGECEEKYGPVLAIAIEK---ESTAGDIYITFDSVPSAQKAITG 61
Query: 117 LNNRWFGGRPVYA 129
LNNRWFGGR + A
Sbjct: 62 LNNRWFGGRQITA 74
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
+EE + +DV ECEDKYG + + + N G++Y+KF R + E A+ L
Sbjct: 485 EEEGEAWIKELEDDVRAECEDKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGL 540
Query: 118 NNRWFGGRPVYAELSPVTD 136
N R+FGGR + A+ PV D
Sbjct: 541 NGRFFGGRQITAQ--PVVD 557
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 17 RCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNV--TDEEMQEHYD-NFFEDVF 73
+ +RI P + I N+ PQ S L+ N+ +EE + +D + EDV
Sbjct: 507 KLARIDPTPAKMEPIARPNI---PQTMQSR---SVLMKNMFNPEEETERDWDKDLAEDVK 560
Query: 74 VECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ECE KYG + + V G +Y+KF + A+ A+ LN RWFGGR + A
Sbjct: 561 GECESKYGRVLAIKVE----KESQGEIYVKFETVDAAKNAIEGLNGRWFGGRQITA 612
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECE+KYG + +++ N G++Y+KF R +
Sbjct: 466 LLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISLDPNT----QGDIYLKFDRVQ 521
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 522 GGENAIKGLNGRFFGGRQISAQ--PVVD 547
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 23/103 (22%)
Query: 28 SQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYD-NFFEDVFVECEDKYGEIEEM 86
S+++LL N++ NP+ EE + +D + EDV ECEDKYG++E +
Sbjct: 507 SRSVLLKNMF-NPE-----------------EETERDWDKDLAEDVKGECEDKYGKVEFI 548
Query: 87 NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
V G +Y+KF E A+ A+ L+ RWFGG V A
Sbjct: 549 KVER----ESQGEIYVKFDSIESAKNAIQGLHGRWFGGNQVSA 587
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
++EE + + +DV ECE+KYG + + + N G++Y+KF R + E A+
Sbjct: 480 SEEEGEAWIKDLEDDVRAECEEKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKG 535
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGGR + A+ PV D
Sbjct: 536 LNGRFFGGRQITAQ--PVVD 553
>gi|296411655|ref|XP_002835545.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629331|emb|CAZ79702.1| unnamed protein product [Tuber melanosporum]
Length = 533
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV ECE+KYG + + + N G +YIKF + + EKA+ LN R+FGGR + A
Sbjct: 458 DDVKTECENKYGHVVHIALDPNS----QGEIYIKFEKVQGGEKAIQGLNGRFFGGRRISA 513
Query: 130 ELSPVTD 136
SPV D
Sbjct: 514 --SPVVD 518
>gi|119589408|gb|EAW69002.1| hCG1642635 [Homo sapiens]
Length = 145
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY--INPQNSAKSADGSHLISNVTD 58
VNC FY K GACR GDRCS H+ PT S T+L+ +++ + + S ++
Sbjct: 26 VNCPFYSKTGACRFGDRCS--HDFPTSSPTLLIKSMFTVFGKEQCRRDDYDSEASLEYSE 83
Query: 59 EEMQEHYDNFFEDVFVECED---KYGEIEEMNVCDNLGDHLVGN 99
EE + + +F EDV E ++ + + + V NL HL G
Sbjct: 84 EETYQQFLDFCEDVLPEFKNVGRDWARVIQFKVSCNLEPHLRGK 127
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
+EE + +DV ECEDKYG + + + N G++Y+KF R + E A+ L
Sbjct: 498 EEEGESWVKELEDDVRAECEDKYGHVVHIALDPNTQ----GDIYLKFDRVQGGENAIKGL 553
Query: 118 NNRWFGGRPVYAELSPVTD 136
N R+FGGR + A+ PV D
Sbjct: 554 NGRFFGGRQISAQ--PVVD 570
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 52 LISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
LI N+ D+ + + EDV ECE KYG++ +++ + D G VY+KF R +
Sbjct: 449 LIKNMYDQNTETDPNWQKELKEDVKGECEAKYGKVVHIDLALDNND---GEVYVKFDRVQ 505
Query: 109 DAEKAVNDLNNRWFGGRPVYAE 130
E A LN RWFGGR + A+
Sbjct: 506 GGENAFKGLNGRWFGGRMLTAQ 527
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 22 HNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTD--EEMQEHYD-NFFEDVFVECED 78
+N+P+ + + P ++ S L+ N+ D EE + +D + EDV EC+
Sbjct: 543 NNEPSPAASDANTATQERPAGIPEATSTSLLLKNMFDPAEETEADWDKDLAEDVKDECQA 602
Query: 79 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 133
KYG + ++V G +Y+ F + + KA++ LN R+FGG+P+ A+ P
Sbjct: 603 KYGPVTRIHVEK----ESAGEIYLTFADLDASRKALDGLNGRFFGGKPISAQYIP 653
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
+EE + +DV ECE+KYG + +++ N G++Y+KF R + E A+
Sbjct: 476 AEEEGEAWIKELEDDVRAECEEKYGHVVHISLDPNS----QGDIYLKFDRVQGGENAIKG 531
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGGR + A+ PV D
Sbjct: 532 LNGRFFGGRQISAQ--PVVD 549
>gi|156344584|ref|XP_001621239.1| hypothetical protein NEMVEDRAFT_v1g222211 [Nematostella vectensis]
gi|156206977|gb|EDO29139.1| predicted protein [Nematostella vectensis]
Length = 220
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ 41
VNC+FY K G+CR G+RCSR H +P S T+L+ +Y + Q
Sbjct: 164 VNCAFYLKTGSCRFGERCSRQHPRPPSSVTLLIPGMYQDIQ 204
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + N +EE + +DV E EDKYG + ++V N G++Y+KF + +
Sbjct: 464 HNMFNPDEEEGDDWVKELEDDVRQEAEDKYGRVVHISVDPNSK----GDIYLKFEKVQGG 519
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 520 ENAIRGLNGRYFGGRMIDA--SPVVD 543
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 40 PQNSAKSADGSHLISNV--TDEEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHL 96
PQN + S L+ N+ DEE + +D + +DV EC KYG + + + +
Sbjct: 484 PQNQSTR---SVLLLNMFDPDEETEPDWDKDLADDVKGECASKYGPVTALKIEKDSQ--- 537
Query: 97 VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 131
G +Y++F + A+KAV+ LN RWFGGR V A
Sbjct: 538 -GEIYVQFESVDSAKKAVDSLNGRWFGGRQVNARF 571
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 36 LYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDH 95
L IN N A H + + +EE + EDV E E+KYG + +++ N
Sbjct: 457 LPINNVNQASRCVVLHNMFDPAEEEGDDWVKELEEDVRQEAEEKYGHVVHISLDPNS--- 513
Query: 96 LVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTD--FREACCRQYEMG 148
G++Y+KF R + E A+ LN R+FGGR + A +PV D + + C +G
Sbjct: 514 -QGDIYLKFDRVQGGENAIKGLNGRYFGGRMITA--APVVDAFYSKQCTNPNRLG 565
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
T+EE +DV ECE+KYG + + + N G++Y+KF R + E A+
Sbjct: 496 TEEEGDSWVKELEDDVRAECEEKYGHVVHIALDPNTQ----GDIYLKFDRVQGGENAIKG 551
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGGR + A+ PV D
Sbjct: 552 LNGRFFGGRQITAQ--PVVD 569
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
T+EE +DV ECE+KYG + + + N G++Y+KF R + E A+
Sbjct: 507 TEEEGDSWVKELEDDVRAECEEKYGHVVHIALDPNAQ----GDIYLKFDRVQGGENAIKG 562
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGGR + A+ PV D
Sbjct: 563 LNGRFFGGRQITAQ--PVVD 580
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 36 LYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDH 95
L IN N A H + + +EE + EDV E E+KYG + +++ N
Sbjct: 457 LPINNVNQASRCVVLHNMFDPAEEEGDDWVKELEEDVRQEAEEKYGHVVHISLDPNS--- 513
Query: 96 LVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTD 136
G++Y+KF R + E A+ LN R+FGGR + A +PV D
Sbjct: 514 -QGDIYLKFDRVQGGENAIKGLNGRYFGGRMITA--APVVD 551
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 52 LISNVTDEEMQEHYDNFF----EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRRE 107
L+ N+ D QE NF EDV EC KYG++ + C + D G VY++F
Sbjct: 504 LLKNMFDPA-QETEPNFHLDIQEDVTEECS-KYGKVLQ---CHVVRDSPSGLVYLRFESS 558
Query: 108 EDAEKAVNDLNNRWFGGRPVYAELSPVTDFREAC 141
E A KA+ LN RWF G+ + AE F C
Sbjct: 559 EGAAKAIQALNGRWFAGKVISAEFIDENTFAAGC 592
>gi|302785353|ref|XP_002974448.1| hypothetical protein SELMODRAFT_101529 [Selaginella
moellendorffii]
gi|300158046|gb|EFJ24670.1| hypothetical protein SELMODRAFT_101529 [Selaginella
moellendorffii]
Length = 69
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 27/37 (72%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLY 37
VNC FY K+GACR DRCSR H KP S T+LL N+Y
Sbjct: 4 VNCPFYLKMGACRRRDRCSRAHLKPKQSCTLLLNNMY 40
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 59 EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLN 118
EE + +DV ECE+KYG + + + N G++Y+KF R + E A+ LN
Sbjct: 468 EEGESWVKELEDDVRAECEEKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGLN 523
Query: 119 NRWFGGRPVYAELSPVTD 136
R+FGGR + A+ PV D
Sbjct: 524 GRFFGGRQITAQ--PVVD 539
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 20/107 (18%)
Query: 24 KPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEI 83
+P+ S+ +L+ N+Y N +E +DV ECE+KYG++
Sbjct: 519 QPSASRCVLIKNMY-----------------NQNEESEPGWQKELKDDVKSECEEKYGKV 561
Query: 84 EEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAE 130
+++ + D G VY+KF R + E A LN RWF GR + A+
Sbjct: 562 VHIDLALDNND---GEVYVKFDRVQGGENAFKGLNGRWFAGRMITAQ 605
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
T+EE +DV ECE+KYG + + + N G++Y+KF R + E A+
Sbjct: 509 TEEEGDSWVKELEDDVRAECEEKYGHVVHIALDPNAQ----GDIYLKFDRVQGGENAIKG 564
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGGR + A+ PV D
Sbjct: 565 LNGRFFGGRQITAQ--PVVD 582
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 58 DEEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
+EE ++++D + +DV ECE+KYG++ + V + G +Y+KF + A+ AV
Sbjct: 500 EEETEQNWDKDLADDVKGECENKYGKVLAIKVEKDSQ----GEIYVKFDTVDTAKSAVQG 555
Query: 117 LNNRWFGGRPVYAEL 131
LN RWFGGR + A
Sbjct: 556 LNGRWFGGRQISANF 570
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
+EE + +DV ECEDKYG + + + N G++Y+KF R + E A+ L
Sbjct: 486 EEEGEAWIKELEDDVRAECEDKYGHVVHIALDPNSQ----GDIYLKFDRVQGGENAIKGL 541
Query: 118 NNRWFGGRPVYAELSPVTD 136
N R+FGGR + A+ PV D
Sbjct: 542 NGRFFGGRQITAQ--PVVD 558
>gi|401888136|gb|EJT52101.1| hypothetical protein A1Q1_06639 [Trichosporon asahii var. asahii
CBS 2479]
gi|406699204|gb|EKD02415.1| hypothetical protein A1Q2_03307 [Trichosporon asahii var. asahii
CBS 8904]
Length = 612
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Query: 52 LISNV--TDEEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+SN+ DEE + ++D + +DV VE E+KYG + + V D + + G+VYI+F+ +
Sbjct: 523 LVSNMFNPDEETERNWDIDLADDVKVEVENKYGHVARIKV-DKMSNK--GDVYIEFKDID 579
Query: 109 DAEKAVNDLNNRWFGGRPVYAE 130
AE+A L R+FGGR + A+
Sbjct: 580 GAERAQRGLQGRFFGGRSLTAQ 601
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECE+KYG + +++ N G++Y+KF R +
Sbjct: 498 LLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISLDPNTQ----GDIYLKFDRVQ 553
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 554 GGENAIKGLNGRFFGGRQISAQ--PVVD 579
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECE+KYG + +++ N G++Y+KF R +
Sbjct: 498 LLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISLDPNTQ----GDIYLKFDRVQ 553
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 554 GGENAIKGLNGRFFGGRQISAQ--PVVD 579
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECE+KYG + +++ N G++Y+KF R +
Sbjct: 495 LLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISLDPNTQ----GDIYLKFDRVQ 550
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 551 GGENAIKGLNGRFFGGRQISAQ--PVVD 576
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECE+KYG + +++ N G++Y+KF R +
Sbjct: 501 LLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISLDPNTQ----GDIYLKFDRVQ 556
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 557 GGENAIKGLNGRFFGGRQISAQ--PVVD 582
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 527 DDVRAECEEKYGHVVHIALDPNT----QGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 582
Query: 130 ELSPVTD 136
+ PV D
Sbjct: 583 Q--PVVD 587
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECE+KYG + +++ N G++Y+KF R +
Sbjct: 498 LLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISLDPNTQ----GDIYLKFDRVQ 553
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 554 GGENAIKGLNGRFFGGRQISAQ--PVVD 579
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +DV ECE+KYG + +++ N G++Y+KF R +
Sbjct: 500 LLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISLDPNTQ----GDIYLKFDRVQ 555
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A+ PV D
Sbjct: 556 GGENAIKGLNGRFFGGRQISAQ--PVVD 581
>gi|195355939|ref|XP_002044442.1| GM11754 [Drosophila sechellia]
gi|194130810|gb|EDW52853.1| GM11754 [Drosophila sechellia]
Length = 400
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 26/121 (21%)
Query: 11 ACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFE 70
A GD + I P S+ +LL N+ + P + DEE++ +
Sbjct: 290 ASESGDSITEIMKSP--SKVVLLRNM-VGPGD--------------VDEELEPEVKD--- 329
Query: 71 DVFVECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVY 128
EC KYGE+ + + ++ G ++++FRR E A KAV DLN R+FGGR V
Sbjct: 330 ----ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVR 385
Query: 129 A 129
A
Sbjct: 386 A 386
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 23/103 (22%)
Query: 28 SQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDN-FFEDVFVECEDKYGEIEEM 86
S+++LL N++ NP+ EE + +D +DV E EDKYG++ +
Sbjct: 492 SKSVLLKNMF-NPE-----------------EETERDWDKELADDVKNEVEDKYGDVNFI 533
Query: 87 NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
V G +Y+KF E A+KA+ L+ RWFGGR V A
Sbjct: 534 KVERE----SQGEIYVKFDSIESAKKAIEGLHGRWFGGRQVSA 572
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 20/107 (18%)
Query: 24 KPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEI 83
+PT ++ +LL N+Y QN+ +D Q D +DV EC++KYG++
Sbjct: 504 QPTATRCVLLKNMY--DQNTE------------SDPNWQ---DELKDDVKSECDEKYGKV 546
Query: 84 EEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAE 130
+ + + D G +YIKF R + E A+ LN RWFGG + A+
Sbjct: 547 VHIGLALDNND---GEIYIKFDRVQGGENAIRGLNGRWFGGNMITAQ 590
>gi|58430724|dbj|BAD89156.1| hypothetical protein [Hodotermopsis sjoestedti]
Length = 95
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 146 EMGECTRSGFCNFMHLKPISRE 167
EMGECTRSGFCNFMHLKPISRE
Sbjct: 1 EMGECTRSGFCNFMHLKPISRE 22
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
+EE + +DV ECE+KYG + + + N G++Y+KF R + E A+ L
Sbjct: 483 EEEGESWIKELEDDVRAECEEKYGHVVHIALDPNS----QGDIYLKFDRVQGGENAIKGL 538
Query: 118 NNRWFGGRPVYAELSPVTD 136
N R+FGG+ + A+ PV D
Sbjct: 539 NGRFFGGKQITAQ--PVVD 555
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 52 LISNVTD--EEMQEHY-DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE E + EDV ECE+KYG + V +L G++Y+KF R +
Sbjct: 462 LLRNMFDPAEETGEAWIKELEEDVRSECEEKYGHV----VHISLDVSSQGDIYLKFDRVQ 517
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGG+ + A+ PV D
Sbjct: 518 GGENAIKGLNGRYFGGKQITAQ--PVVD 543
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 20/108 (18%)
Query: 23 NKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGE 82
++P S+ +LL N+Y N A+ T+ Q+ + EDV VEC++KYG+
Sbjct: 530 DQPAPSRCVLLKNVY----NQAEE----------TEPGWQKELE---EDVKVECDEKYGQ 572
Query: 83 IEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAE 130
+ + + + D G +YIKF R++ E A+ LN R +GGR + A+
Sbjct: 573 VVHIGLALDNND---GEIYIKFDRKQGGENAIRGLNGRMYGGRMITAQ 617
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 52 LISNVTD--EEMQEHY-DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE E++ EDV ECE KYG + V +L G++Y+KF R +
Sbjct: 468 LLRNMFDPAEETGENWVKELEEDVRSECEKKYGHV----VHISLDASSQGDIYLKFDRVQ 523
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGG+ + A+ PV D
Sbjct: 524 GGENAIKGLNGRYFGGKQITAQ--PVVD 549
>gi|140053487|gb|ABO80462.1| U2 auxiliary factor small subunit [Medicago truncatula]
Length = 251
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEE 60
+C F+ K ACR GDRCSR+H P S T+L+ N+Y P + + +G ++ EE
Sbjct: 191 AHCPFHLKTAACRFGDRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEAVAQSWLEE 250
Query: 61 M 61
+
Sbjct: 251 L 251
>gi|326514938|dbj|BAJ99830.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 66 DNFFEDVFVECEDKYGEI------EEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
D+ +DV EC KYGE+ E D+ +H+V ++++F+ + AEK V LN
Sbjct: 556 DDLQQDVTDECS-KYGEVVKVVIYTEQQGEDDNAEHIV-KIFVEFQTSKQAEKTVESLNG 613
Query: 120 RWFGGRPVYAELSPVTDFR 138
R+FGGR V AEL T ++
Sbjct: 614 RYFGGRAVKAELYDQTAYQ 632
>gi|156379395|ref|XP_001631443.1| predicted protein [Nematostella vectensis]
gi|156218483|gb|EDO39380.1| predicted protein [Nematostella vectensis]
Length = 357
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQ 41
VNC+FY K G+CR G+RCSR H +P S T+L+ +Y + Q
Sbjct: 196 VNCAFYLKTGSCRFGERCSRQHPRPPSSVTLLIPGMYQDIQ 236
>gi|194916573|ref|XP_001983016.1| GG11065 [Drosophila erecta]
gi|190647619|gb|EDV45013.1| GG11065 [Drosophila erecta]
Length = 200
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 39/130 (30%)
Query: 25 PTFSQTILLLNLYINPQNSAKSADGSHLISNVT---------------------DEEMQE 63
P+ S +LL PQ + K+A+ S++T DEE++
Sbjct: 71 PSPSHKAMLL-----PQVAGKAAESGETGSSITEIMKSPSKVVLLRNMVGPGDVDEELEP 125
Query: 64 HYDNFFEDVFVECEDKYGEIEEMNVCDNLG----DHLVGNVYIKFRREEDAEKAVNDLNN 119
+ EC KYGE+ + + ++ G D + ++++FRR E A KAV DLN
Sbjct: 126 EVKD-------ECNTKYGEVNSVIIHESFGTVPEDAV--KIFVEFRRIESAIKAVVDLNG 176
Query: 120 RWFGGRPVYA 129
R+FGGR V A
Sbjct: 177 RFFGGRQVRA 186
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++ N+ D E +E D +DV E E KYG + ++V N G++Y+KF + +
Sbjct: 474 VLHNMFDPEEEEGTDWVKELEDDVRQEAESKYGHVVHISVDPN----SKGDIYLKFDKVQ 529
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 530 GGENAIKGLNGRYFGGRMIDA--SPVVD 555
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++ N+ D E +E D +DV E E KYG + ++V N G++Y+KF + +
Sbjct: 474 VLHNMFDPEEEEGTDWVKELEDDVRQEAESKYGHVVHISVDPN----SKGDIYLKFDKVQ 529
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 530 GGENAIKGLNGRYFGGRMIDA--SPVVD 555
>gi|388517133|gb|AFK46628.1| unknown [Lotus japonicus]
Length = 162
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV EC K G I+ + VC+N H G V ++F+ +DA+ ++ +N RWFGGR ++A
Sbjct: 75 EDVKEECT-KLGPIDSVKVCEN---HPQGVVLVRFKDRKDAQTCIDTMNGRWFGGRQIHA 130
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 527 DDVRAECEEKYGHVVHIALDPNTQ----GDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 582
Query: 130 ELSPVTD 136
+ PV D
Sbjct: 583 Q--PVVD 587
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV ECE+KYG + + + N G++Y+KF R + E A+ LN R+FGGR + A
Sbjct: 523 DDVRAECEEKYGHVVHIALDPNTQ----GDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 578
Query: 130 ELSPVTD 136
+ PV D
Sbjct: 579 Q--PVVD 583
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + +EE E +DV E E KYG + ++V N G++Y+KF + +
Sbjct: 473 HNMFDPEEEEGDEWVKELEDDVRQEAETKYGRVVHISVDPNS----KGDIYLKFDKVQGG 528
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 529 ENAIRGLNGRYFGGRMIDA--SPVVD 552
>gi|161612122|gb|AAI56009.1| LOC100135135 protein [Xenopus (Silurana) tropicalis]
Length = 260
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 112 KAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
KA N RW+ R + E SPVT ++ A C +E +C R CNF+H+
Sbjct: 2 KAFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV 51
>gi|302412845|ref|XP_003004255.1| RNA-binding protein rsd1 [Verticillium albo-atrum VaMs.102]
gi|261356831|gb|EEY19259.1| RNA-binding protein rsd1 [Verticillium albo-atrum VaMs.102]
Length = 227
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + +EE ++ +DV E E KYG + ++V N G++Y+KF + +
Sbjct: 135 HNMFDPEEEEGEDWAKELEDDVRQEAESKYGRVVHISVDPNS----KGDIYLKFDKVQGG 190
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 191 ENAIKGLNGRYFGGRMIDA--SPVVD 214
>gi|356576634|ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
Length = 500
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV EC K G ++ + +C+N H G V ++F+ +DA+K + +N RWFGGR ++A
Sbjct: 413 EDVKEECT-KLGPVDSVKICEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHA 468
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 18 CSRIHNKPTF-SQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYD-NFFEDVFVE 75
+R H T S+++LL N++ NP+ EE + +D + +DV E
Sbjct: 241 VARPHIPQTMQSRSVLLKNMF-NPE-----------------EETERDWDKDLADDVKSE 282
Query: 76 CEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
C KYG ++ + V G +Y+ F + A +A+ LN RWFGGR + A
Sbjct: 283 CATKYGPVQAIKVEK----ETQGEIYVLFETVDAAGQAIEGLNGRWFGGRQISA 332
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 36 LYINPQNSAKSADGSHLISNVTD------EEMQEHYDNFFEDVFVECEDKYGEIEEMNVC 89
L IN N AK G+ S+ EE + EDV E E+KYG + +++
Sbjct: 457 LPINNVNQAKFGQGNTYDSSTDQFFCFYREEGDDWVKELEEDVRQEAEEKYGHVVHISLD 516
Query: 90 DNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTD 136
N G++Y+KF R + E A+ LN R+FGGR + A +PV D
Sbjct: 517 PNSQ----GDIYLKFDRVQGGENAIKGLNGRYFGGRMITA--APVVD 557
>gi|242065404|ref|XP_002453991.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
gi|241933822|gb|EES06967.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
Length = 263
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP 40
+C F+ K GACR G RCSR+H P S T+L+ N+Y P
Sbjct: 213 AHCPFHLKTGACRFGVRCSRVHFYPDKSSTLLMKNMYNGP 252
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 40 PQNSAKSADGSHLISNVTD--EEMQEHYDNFFED-VFVECEDKYGEIEEMNVCDNLGDHL 96
P + +A ++ N+ D EE E+++ ED V E E+KYG + +++ N
Sbjct: 469 PPINVNTASRCVVLRNMFDPAEETGENWEKELEDDVRAEAEEKYGHVVHISLDPNSQ--- 525
Query: 97 VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTD 136
G++Y+KF R + E A+ LN R+FGGR + A +PV D
Sbjct: 526 -GDIYLKFDRVQGGENAIQGLNGRYFGGRMISA--TPVVD 562
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + T+EE + ++V E E++YG + ++V N G++Y+KF + +
Sbjct: 479 HNMFDPTEEEGDDWVKELEDEVRQEAEERYGHVVHISVDPNS----KGDIYLKFDKVQGG 534
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 535 ENAIKGLNGRYFGGRMIDA--SPVVD 558
>gi|356535254|ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
Length = 503
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV EC K G ++ + +C+N H G V ++F+ +DA+K + +N RWFGGR ++A
Sbjct: 416 EDVKEEC-TKLGPLDSVKICEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHA 471
>gi|392574247|gb|EIW67384.1| hypothetical protein TREMEDRAFT_33681 [Tremella mesenterica DSM
1558]
Length = 619
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 29/120 (24%)
Query: 18 CSRIH-------NKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYD-NFF 69
C ++H N P +L+N NP+ EE + ++D +
Sbjct: 509 CHKMHIIDNSTNNAPVAPTPFILVNNMFNPE-----------------EETERNWDLDLA 551
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV E E KYG ++ + V D + G+VY++F +E+AV L+ R+FGGR + A
Sbjct: 552 EDVKGEIESKYGRVKRIKV-DKMS---AGDVYVEFEGTGASERAVKGLHGRFFGGRSLRA 607
>gi|357164467|ref|XP_003580063.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 2
[Brachypodium distachyon]
Length = 477
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV EC K+G ++ + VC+N H G V +KF+ +D K + LN RWFGG+ ++A
Sbjct: 388 EDVRQECM-KFGPVDNIKVCEN---HPQGVVLVKFKDRKDGIKCIEALNERWFGGKQIHA 443
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++ N+ D E +E D +DV E E KYG + ++V N G++Y+KF + +
Sbjct: 471 VLHNMFDPEEEEGDDWVKELEDDVRQEAETKYGRVVHISVDPNS----KGDIYLKFDKVQ 526
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 527 GGENAIRGLNGRYFGGRMIDA--SPVVD 552
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
+EE + +DV E E+KYG + ++V N G++Y+KF + + E A+ L
Sbjct: 460 EEEGDDWVKELEDDVRQEAEEKYGHVVHISVDPNSK----GDIYLKFDKVQGGENAIRGL 515
Query: 118 NNRWFGGRPVYAELSPVTD 136
N R+FGGR + A SPV D
Sbjct: 516 NGRYFGGRMIDA--SPVVD 532
>gi|357164465|ref|XP_003580062.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1
[Brachypodium distachyon]
Length = 489
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV EC K+G ++ + VC+N H G V +KF+ +D K + LN RWFGG+ ++A
Sbjct: 400 EDVRQECM-KFGPVDNIKVCEN---HPQGVVLVKFKDRKDGIKCIEALNERWFGGKQIHA 455
>gi|194877371|ref|XP_001973867.1| GG21408 [Drosophila erecta]
gi|190657054|gb|EDV54267.1| GG21408 [Drosophila erecta]
Length = 406
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 35/128 (27%)
Query: 25 PTFSQTILLLNLYINPQNSAKSADGSHLISNVT---------------------DEEMQE 63
P+ S +LL PQ + K+A+ S++T DEE++
Sbjct: 277 PSPSHKAMLL-----PQVAGKAAESGETGSSITEIMKSPSKVVLLRNMVGPGDVDEELEP 331
Query: 64 HYDNFFEDVFVECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRW 121
+ EC KYGE+ + + ++ G ++++FRR E A KAV DLN R+
Sbjct: 332 EVKD-------ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRF 384
Query: 122 FGGRPVYA 129
FGGR V A
Sbjct: 385 FGGRQVRA 392
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 52 LISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++ N+ D E +E D +DV E E KYG + ++ N G++Y+KF + +
Sbjct: 472 VLHNMFDPEEEEGTDWVKELEDDVRQEAESKYGHVVHISADPNS----KGDIYLKFDKVQ 527
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 528 GGENAIKGLNGRYFGGRMIDA--SPVVD 553
>gi|357445229|ref|XP_003592892.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula]
gi|355481940|gb|AES63143.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula]
Length = 300
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLIS 54
+C F+ K ACR GDRCSR+H P S T+L+ N+Y P + + +G + S
Sbjct: 191 AHCPFHLKTAACRFGDRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEVCS 244
>gi|242082602|ref|XP_002441726.1| hypothetical protein SORBIDRAFT_08g001370 [Sorghum bicolor]
gi|241942419|gb|EES15564.1| hypothetical protein SORBIDRAFT_08g001370 [Sorghum bicolor]
Length = 479
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K+G ++ + VC+N H G + +KF+ +D K + +N RWFGGR ++A
Sbjct: 392 DVREECT-KFGPVDNVKVCEN---HPQGVILVKFKDRKDGAKCIEKMNGRWFGGRQIHA 446
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 52 LISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++ N+ D E +E D +D+ E E +YG + + V N G+VY+KF + +
Sbjct: 468 VLHNMFDPEEEEGDDWVKELEDDIRAEAERQYGHVVHIAVDPNS----KGDVYLKFDKVQ 523
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 524 GGENAIKGLNGRYFGGRMINA--SPVVD 549
>gi|256091162|ref|XP_002581498.1| hypothetical protein [Schistosoma mansoni]
Length = 60
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 23/26 (88%)
Query: 149 ECTRSGFCNFMHLKPISRELRRYLYS 174
ECTR GFCNFMHLKPISREL R LY+
Sbjct: 1 ECTRGGFCNFMHLKPISRELCRKLYN 26
>gi|317106644|dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]
Length = 552
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K G ++ + VC+N H G V ++F+ +DA+K + +N RWFGGR V+A
Sbjct: 466 DVKEECV-KLGPVDSVKVCEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQVHA 520
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++ N+ D E +E D +DV E E +YG + ++V N G++Y+KF + +
Sbjct: 470 VLHNMFDPEEEEGDDWVKELEDDVRQEAESRYGHVVHISVDPN----SKGDIYLKFDKVQ 525
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 526 GGENAIKGLNGRYFGGRMIDA--SPVVD 551
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 52 LISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++ N+ D E +E D +DV E E KYG + ++V N G++Y+KF + +
Sbjct: 476 VLHNMFDPEEEEGEDWAKELEDDVRQEAESKYGRVVHISVDPNSK----GDIYLKFDKVQ 531
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 532 GGENAIKGLNGRYFGGRMIDA--SPVVD 557
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINP-QNSAKSADGSHLISNVTD- 58
VN + Y + R R + P Q IL I P + A L+ N+ D
Sbjct: 455 VNFNSYSRDALMRKLARTDEASSAPPERQQILKPKTEIKPLPVNVNMASRCVLLKNMFDP 514
Query: 59 -EEMQEHYDNFFE-DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
EE E + E DV E E KYG + ++V N G++Y+KF + + E A+
Sbjct: 515 AEESGEDWIKDLENDVREEAEKKYGHVVHISVDPNSN----GDIYLKFDKVQGGENAIKG 570
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGG + A +PV D
Sbjct: 571 LNGRYFGGNIITA--APVVD 588
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 52 LISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++ N+ D E +E D +D+ E E +YG + + V N G+VY+KF + +
Sbjct: 464 VLHNMFDPEEEEGDDWVKELEDDIRAEAERQYGHVVHIAVDPNS----KGDVYLKFDKVQ 519
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 520 GGENAIKGLNGRYFGGRMINA--SPVVD 545
>gi|359392834|gb|AEV45824.1| rough endosperm 3-umu1 gamma isoform [Zea mays]
Length = 311
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADG 49
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G
Sbjct: 259 AHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALEQDEG 307
>gi|345569109|gb|EGX51978.1| hypothetical protein AOL_s00043g712 [Arthrobotrys oligospora ATCC
24927]
Length = 569
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 51 HLISNVTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL----VGNVYIKF 104
L++ VT +E+ QE Y+ EDV EC +K+G I ++ + G+ VG +Y++F
Sbjct: 473 QLLNMVTADELLDQEEYEEILEDVTDEC-NKFGPIIDIKIPRPSGNQRAAAGVGKIYVRF 531
Query: 105 RREEDAEKAVNDLNNRWFGGRPV 127
E AEKA+ L R F R V
Sbjct: 532 EEHESAEKALKSLAGRKFADRTV 554
>gi|195483222|ref|XP_002086892.1| GE10978 [Drosophila yakuba]
gi|194187173|gb|EDX00757.1| GE10978 [Drosophila yakuba]
Length = 367
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 30/119 (25%)
Query: 15 GDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFV 74
G + I P S+ +LL N+ + P + DEE++ +
Sbjct: 261 GSTITEIMKSP--SKVVLLRNM-VGPGD--------------VDEELEPEVKD------- 296
Query: 75 ECEDKYGEIEEMNVCDNLG----DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EC KYGE+ + + ++ G D + ++++FRR E A KAV DLN R+FGGR V A
Sbjct: 297 ECNTKYGEVNSVIIHESFGTVPEDAV--KIFVEFRRIESAIKAVVDLNGRFFGGRQVRA 353
>gi|359392846|gb|AEV45830.1| rough endosperm 3 gamma isoform 1 [Zea mays]
gi|359392848|gb|AEV45831.1| rough endosperm 3 gamma isoform 2 [Zea mays]
gi|359392850|gb|AEV45832.1| rough endosperm 3 gamma isoform 3 [Zea mays]
gi|359392852|gb|AEV45833.1| rough endosperm 3 gamma isoform 4 [Zea mays]
gi|359392854|gb|AEV45834.1| rough endosperm 3 gamma isoform 5 [Zea mays]
gi|359392856|gb|AEV45835.1| rough endosperm 3 gamma isoform 6 [Zea mays]
gi|359392858|gb|AEV45836.1| rough endosperm 3 gamma isoform 7 [Zea mays]
gi|359392860|gb|AEV45837.1| rough endosperm 3 gamma isoform 8 [Zea mays]
gi|359392862|gb|AEV45838.1| rough endosperm 3 gamma isoform 9 [Zea mays]
Length = 276
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADG 49
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G
Sbjct: 224 AHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALEQDEG 272
>gi|359392864|gb|AEV45839.1| rough endosperm 3 delta isoform [Zea mays]
Length = 289
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADG 49
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G
Sbjct: 224 AHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALEQDEG 272
>gi|359392838|gb|AEV45826.1| rough endosperm 3 beta isoform 1 [Zea mays]
gi|359392840|gb|AEV45827.1| rough endosperm 3 beta isoform 2 [Zea mays]
gi|359392842|gb|AEV45828.1| rough endosperm 3 beta isoform 3 [Zea mays]
gi|359392844|gb|AEV45829.1| rough endosperm 3 beta isoform 4 [Zea mays]
Length = 302
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADG 49
+C F+ K GACR G RCSR+H P S T+L+ N+Y P + + +G
Sbjct: 224 AHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALEQDEG 272
>gi|17946228|gb|AAL49154.1| RE57542p [Drosophila melanogaster]
gi|220948600|gb|ACL86843.1| Spf45-PC [synthetic construct]
gi|220958036|gb|ACL91561.1| Spf45-PC [synthetic construct]
Length = 379
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAV 114
DEE++ + EC KYGE+ + + ++ G ++++FRR E A KAV
Sbjct: 298 VDEELEPEVKD-------ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAV 350
Query: 115 NDLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 351 VDLNGRFFGGRQVRA 365
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + T+EE + ++V E E +YG + ++V N G++Y+KF + +
Sbjct: 479 HNMFDATEEEGDDWVKELEDEVRQEAEQRYGHVVHISVDPNSK----GDIYLKFDKVQGG 534
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 535 ENAIKGLNGRYFGGRMIDA--SPVVD 558
>gi|449518089|ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
Length = 498
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 79 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
K+G ++ + VC+N H G V I+F+ +DA+K + +N RWFGG+ ++A
Sbjct: 419 KFGPVDSVKVCEN---HPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHA 466
>gi|242069889|ref|XP_002450221.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
gi|241936064|gb|EES09209.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
Length = 469
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
DEE+ + DV EC K+G ++ + VC+N H G V +KF+ +DA K +
Sbjct: 371 ADEELLSELET---DVREEC-IKFGPVDNVKVCEN---HPQGVVLVKFKDRKDAAKCIEK 423
Query: 117 LNNRWFGGRPVYA 129
+N RWF GR ++A
Sbjct: 424 MNGRWFAGRQIHA 436
>gi|195552366|ref|XP_002076446.1| GD17712 [Drosophila simulans]
gi|194201699|gb|EDX15275.1| GD17712 [Drosophila simulans]
Length = 403
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG----DHLVGNVYIKFRREEDAEK 112
DEE++ + EC KYGE+ + + ++ G D + ++++FRR E A K
Sbjct: 322 VDEELEPEVKD-------ECNTKYGEVNSVIIHESFGTVPEDAV--KIFVEFRRIESAIK 372
Query: 113 AVNDLNNRWFGGRPVYA 129
AV DLN R+FGGR V A
Sbjct: 373 AVVDLNGRFFGGRQVRA 389
>gi|449457363|ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
Length = 496
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 79 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
K+G ++ + VC+N H G V I+F+ +DA+K + +N RWFGG+ ++A
Sbjct: 417 KFGPVDSVKVCEN---HPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHA 464
>gi|116007460|ref|NP_001036426.1| Spf45, isoform A [Drosophila melanogaster]
gi|30923530|gb|EAA46008.1| Spf45, isoform A [Drosophila melanogaster]
gi|83270221|gb|ABB99954.1| RNA binding motif protein 17 [Drosophila melanogaster]
gi|201065519|gb|ACH92169.1| FI02801p [Drosophila melanogaster]
Length = 403
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAV 114
DEE++ + EC KYGE+ + + ++ G ++++FRR E A KAV
Sbjct: 322 VDEELEPEVKD-------ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAV 374
Query: 115 NDLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 375 VDLNGRFFGGRQVRA 389
>gi|46409234|gb|AAS93774.1| AT25717p [Drosophila melanogaster]
Length = 363
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAV 114
DEE++ + EC KYGE+ + + ++ G ++++FRR E A KAV
Sbjct: 282 VDEELEPEVKD-------ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAV 334
Query: 115 NDLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 335 VDLNGRFFGGRQVRA 349
>gi|116007456|ref|NP_001036424.1| Spf45, isoform C [Drosophila melanogaster]
gi|51951005|gb|EAA46009.2| Spf45, isoform C [Drosophila melanogaster]
Length = 363
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAV 114
DEE++ + EC KYGE+ + + ++ G ++++FRR E A KAV
Sbjct: 282 VDEELEPEVKD-------ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAV 334
Query: 115 NDLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 335 VDLNGRFFGGRQVRA 349
>gi|351711124|gb|EHB14043.1| Splicing factor U2AF 26 kDa subunit [Heterocephalus glaber]
Length = 91
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/24 (83%), Positives = 21/24 (87%)
Query: 7 FKIGACRHGDRCSRIHNKPTFSQT 30
FKIGAC HGDRCSR+HNKPT SQ
Sbjct: 23 FKIGACWHGDRCSRLHNKPTCSQV 46
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
T+E+ + +DV E E+KYG + + + N G++Y+KF R + E A+
Sbjct: 484 TEEDGENWEKELEDDVRAEAEEKYGHVVHIALDPNSQ----GDIYLKFDRVQGGENAIKG 539
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGGR + A +PV D
Sbjct: 540 LNGRYFGGRMISA--TPVVD 557
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
T+E+ + +DV E E+KYG + + + N G++Y+KF R + E A+
Sbjct: 484 TEEDGENWEKELEDDVRAEAEEKYGHVVHIALDPNSQ----GDIYLKFDRVQGGENAIKG 539
Query: 117 LNNRWFGGRPVYAELSPVTD 136
LN R+FGGR + A +PV D
Sbjct: 540 LNGRYFGGRMISA--TPVVD 557
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + +EE + +DV E E KYG + +++ N G++Y+KF + +
Sbjct: 478 HNMFDPAEEEGENWIKELEDDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGG 533
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMG 148
E A+ LN R+FGGR + A +PV D + RQ G
Sbjct: 534 ENAIKGLNGRYFGGRMITA--APVVDAVYSKSRQPHEG 569
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + +EE + +DV E E KYG + +++ N G++Y+KF + +
Sbjct: 479 HNMFDPAEEEGENWIKELEDDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGG 534
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMG 148
E A+ LN R+FGGR + A +PV D + RQ G
Sbjct: 535 ENAIKGLNGRYFGGRMITA--APVVDAVYSKSRQPHEG 570
>gi|116007458|ref|NP_001036425.1| Spf45, isoform B [Drosophila melanogaster]
gi|46409150|gb|AAS93732.1| RE44883p [Drosophila melanogaster]
gi|51951006|gb|EAA46010.2| Spf45, isoform B [Drosophila melanogaster]
gi|220951092|gb|ACL88089.1| Spf45-PB [synthetic construct]
gi|220959676|gb|ACL92381.1| Spf45-PB [synthetic construct]
Length = 371
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAV 114
DEE++ + EC KYGE+ + + ++ G ++++FRR E A KAV
Sbjct: 290 VDEELEPEVKD-------ECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAV 342
Query: 115 NDLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 343 VDLNGRFFGGRQVRA 357
>gi|71029064|ref|XP_764175.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351129|gb|EAN31892.1| hypothetical protein TP04_0540 [Theileria parva]
Length = 486
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 34 LNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG 93
+ + + P++S +I N+ D ++ + +N +V VEC +KYG + + + +
Sbjct: 380 IQVTLAPESSVVGTSNVIVIYNMVDPKLAD--ENLANEVKVEC-NKYGTVTSVYLHFSAN 436
Query: 94 DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 127
+ + +V++ F EDA+ AV LN RWF GR +
Sbjct: 437 NDTL-SVFVVFNTPEDADNAVRALNTRWFNGRQI 469
>gi|449672593|ref|XP_004207745.1| PREDICTED: splicing factor 45-like [Hydra magnipapillata]
Length = 340
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 26/114 (22%)
Query: 28 SQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEM- 86
S+ +LL+N+ + P D+E+Q + EC KYGEI ++
Sbjct: 244 SKVVLLMNM-VGPGE--------------VDDELQPEIEE-------ECGSKYGEINKVL 281
Query: 87 --NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFR 138
+ D + + V ++++F+R E A KA+ DLN R+FGGR V A+ + FR
Sbjct: 282 IFEIPDAVEEEAV-RIFVEFKRIESAVKALVDLNGRFFGGRSVSAQFYNLDRFR 334
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + +EE ++ +DV E E KYG + +++ N G++Y+KF + +
Sbjct: 475 HNMFDPAEEEGEDWIKELEDDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGG 530
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A +PV D
Sbjct: 531 ENAIKGLNGRYFGGRMITA--APVVD 554
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
+EE +DV E E+KYG + +++ N G++Y+KF R + E A+ L
Sbjct: 502 EEEGDSWEKELEDDVRAEAEEKYGHVVHISLDPNSQ----GDIYLKFDRVQGGENAIKGL 557
Query: 118 NNRWFGGRPVYAELSPVTD 136
N R+FGGR + A +PV D
Sbjct: 558 NGRYFGGRMISA--TPVVD 574
>gi|255543755|ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
communis]
gi|223547951|gb|EEF49443.1| Splicing factor U2AF-associated protein, putative [Ricinus
communis]
Length = 518
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
D+ EC K G ++ + VC+N H G V +KF+ +DA+ + +N RWFGGR V+A
Sbjct: 432 DIREECV-KLGPVDSVKVCEN---HPQGVVLVKFKDRKDAQNCIELMNGRWFGGRQVHA 486
>gi|170088030|ref|XP_001875238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650438|gb|EDR14679.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 52 LISNVTDEEMQ--EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL-----VGNVYIKF 104
+++ VT +++ + Y + +EDV EC + YG +E++ + L VG VY+K+
Sbjct: 257 MLNMVTPDDLTDDQEYGDLYEDVKEECSN-YGAVEDLRIPRPDAVRLDEASGVGRVYVKY 315
Query: 105 RREEDAEKAVNDLNNRWFGGRPVYAEL 131
+ E A A+N+L R F GR + A L
Sbjct: 316 KDSESATAALNNLAGRSFAGRSIIATL 342
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + +EE ++ +DV E E KYG + +++ N G++Y+KF + +
Sbjct: 450 HNMFDPAEEEGEDWIKELEDDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGG 505
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A +PV D
Sbjct: 506 ENAIKGLNGRYFGGRMITA--APVVD 529
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 56 VTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNV-----CDNLGDHLVGNVYIKFRREE 108
V EE+ E Y++ EDV E KYGE+ E+ + D +G V++ F+
Sbjct: 430 VEPEELVDDEEYEDIIEDVREESS-KYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVS 488
Query: 109 DAEKAVNDLNNRWFGGRPVYA 129
DAEKA L R FGG+ V A
Sbjct: 489 DAEKAFAALTGRRFGGKSVIA 509
>gi|194767538|ref|XP_001965872.1| GF15900 [Drosophila ananassae]
gi|190619348|gb|EDV34872.1| GF15900 [Drosophila ananassae]
Length = 401
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL--VGNVYIKFRREEDAEKAV 114
DEE++ + EC KYGE+ + + + G ++++F+R E A KAV
Sbjct: 320 VDEELEPEVKD-------ECHTKYGEVNSVIIHEAFGTAPEDAVKIFVEFKRIESAIKAV 372
Query: 115 NDLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 373 VDLNGRFFGGRQVRA 387
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + +EE + ++V E E+KYG + ++V N G++Y+KF + +
Sbjct: 477 HNMFDPAEEEGDDWVKELEDEVRQEAEEKYGHVVHISVDPNSK----GDIYLKFDKVQGG 532
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 533 ENAIKGLNGRYFGGRMIDA--SPVVD 556
>gi|91083973|ref|XP_975149.1| PREDICTED: similar to splicing factor 45 [Tribolium castaneum]
gi|270006716|gb|EFA03164.1| hypothetical protein TcasGA2_TC013083 [Tribolium castaneum]
Length = 387
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 66 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHL--VGNVYIKFRREEDAEKAVNDLNNRWFG 123
D+ +V EC KYGE+ + + + ++ ++++FRR E A KAV DLN R+FG
Sbjct: 307 DDLEPEVKDECNTKYGEVTSVIIHETQAENPEEAVRIFVEFRRIESAIKAVVDLNGRFFG 366
Query: 124 GRPVYA 129
GR V A
Sbjct: 367 GRQVKA 372
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 52 LISNVTDEEMQEHYD---NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++ N+ D E ++ D +DV E E KYG + + V N G++Y+KF + +
Sbjct: 477 VLHNMFDPEEEDGDDWAKELEDDVRQEAEKKYGRVVHIAVDPNSK----GDIYLKFDKVQ 532
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A SPV D
Sbjct: 533 GGENAIRGLNGRYFGGRMIDA--SPVVD 558
>gi|405120919|gb|AFR95689.1| RNA splicing factor Pad-1 [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 58 DEEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
+EE + ++D + EDV E E KYG ++ + V G VYI+F + A KAV
Sbjct: 508 EEETERNWDLDLAEDVKGEVESKYGRVKRIKV----EKMSAGEVYIEFIDTDSAIKAVKG 563
Query: 117 LNNRWFGGRPVYA 129
LN R+FGGR + A
Sbjct: 564 LNGRFFGGRQLQA 576
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 56 VTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNV-----CDNLGDHLVGNVYIKFRREE 108
V EE+ E Y++ EDV E KYGE+ E+ + D +G V++ F+
Sbjct: 446 VEPEELVDDEEYEDIIEDVREESS-KYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVS 504
Query: 109 DAEKAVNDLNNRWFGGRPVYA 129
DAEKA L R FGG+ V A
Sbjct: 505 DAEKAFAALTGRRFGGKSVIA 525
>gi|224129492|ref|XP_002328730.1| predicted protein [Populus trichocarpa]
gi|222839028|gb|EEE77379.1| predicted protein [Populus trichocarpa]
Length = 71
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADG 49
+C F+ K GACR G RCSR+H P + T+L+ N+Y P + + +G
Sbjct: 19 AHCPFHLKTGACRFGQRCSRVHFYPDKACTLLIKNMYNGPGLAWEQDEG 67
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 51 HLISNVTDEEMQEH--YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL----VGNVYIKF 104
L++ VT EE+ ++ Y+ EDV EC+ K+G + + + +G + VG +Y+KF
Sbjct: 488 QLLNMVTPEELMDNDDYEEIREDVLEECK-KFGNVLSLKIPRPIGGNRQSAGVGKIYVKF 546
Query: 105 RREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREAC 141
+ E A KA+ L R F R V P ++ C
Sbjct: 547 EQVESATKALRALAGRKFSDRTVVTTYFPEENYEVNC 583
>gi|109706823|gb|ABG42998.1| splicing factor 45 [Bombyx mori]
Length = 392
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVN 115
DEE++ + EC KYGE+ ++ + N+ ++++F+R E A KAV
Sbjct: 311 DEELEPEVKD-------ECNTKYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAVV 363
Query: 116 DLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 364 DLNGRFFGGRQVKA 377
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 52 LISNVTD--EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREED 109
LI NV + +E +E + D+ EC+ KYG + ++ G VY+KF ++
Sbjct: 504 LIKNVYNHSKETEESLADLKVDMREECDKKYGSVVHLDTASG---STGGEVYVKFAAKDG 560
Query: 110 AEKAVNDLNNRWFGGRPVYA 129
KAV LN R+FGGR + A
Sbjct: 561 GIKAVQGLNGRFFGGRRLTA 580
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + +EE + +DV E E KYG + +++ N G++Y+KF + +
Sbjct: 479 HNMFDPAEEEGENWIKELEDDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGG 534
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A +PV D
Sbjct: 535 ENAIKGLNGRYFGGRMITA--APVVD 558
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H + + +EE + +DV E E KYG + +++ N G++Y+KF + +
Sbjct: 479 HNMFDPAEEEGENWIKELEDDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGG 534
Query: 111 EKAVNDLNNRWFGGRPVYAELSPVTD 136
E A+ LN R+FGGR + A +PV D
Sbjct: 535 ENAIKGLNGRYFGGRMITA--APVVD 558
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDL 117
+EE + +DV EC+ KYG + + + N G++Y+KF + E A+ L
Sbjct: 519 EEEGESWMKELEDDVKEECQAKYGTVVHIALDPNTQ----GDIYVKFDTVQGGENAIKGL 574
Query: 118 NNRWFGGRPVYAELSPVTD 136
N R+FGGR + A+ PV D
Sbjct: 575 NGRFFGGRQITAQ--PVVD 591
>gi|401410470|ref|XP_003884683.1| hypothetical protein NCLIV_050810 [Neospora caninum Liverpool]
gi|325119101|emb|CBZ54653.1| hypothetical protein NCLIV_050810 [Neospora caninum Liverpool]
Length = 119
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 36 LYINPQNSAKSADGSHLISNVTDE---EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNL 92
+Y NP + A+G NV+DE + +H++ FF +VF E KYGE+E+M VCDN+
Sbjct: 1 MYPNPPVAVAIAEGQ----NVSDELLDQAADHFEAFFSEVFEELA-KYGEVEDMVVCDNI 55
Query: 93 GDHLVGNV 100
+ + +V
Sbjct: 56 EETISEDV 63
>gi|321259451|ref|XP_003194446.1| hypothetical protein CGB_E5340C [Cryptococcus gattii WM276]
gi|317460917|gb|ADV22659.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 615
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 58 DEEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
+EE + ++D + EDV E E KYG+++ + V G VYI+F + A KAV
Sbjct: 535 EEETERNWDLDLAEDVKGEVESKYGKVKRIKV----EKMSAGEVYIEFIDTDSAIKAVKG 590
Query: 117 LNNRWFGGR 125
LN R+FGGR
Sbjct: 591 LNGRFFGGR 599
>gi|58267808|ref|XP_571060.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112313|ref|XP_775132.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257784|gb|EAL20485.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227294|gb|AAW43753.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 615
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 58 DEEMQEHYD-NFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
+EE + ++D + EDV E E KYG ++ + V G VYI+F + A KAV
Sbjct: 535 EEETERNWDLDLAEDVKGEVESKYGRVKRIKV----EKMSAGEVYIEFIDTDSAIKAVKG 590
Query: 117 LNNRWFGGRPVYA 129
LN R+FGGR + A
Sbjct: 591 LNGRFFGGRQLQA 603
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 52 LISNVTD--EEMQEHYD-NFFEDVFVECEDKY-GEIEEMNVCDNLGDHLVGNVYIKFRRE 107
L+ N D EE +D N EDV ECE K+ G +E++ V + G +YI+
Sbjct: 453 LLKNAFDPAEETDPDWDKNLQEDVVAECESKFQGRVEKIVVEKDS----KGEIYIQCDSI 508
Query: 108 EDAEKAVNDLNNRWFGGRPVYA 129
+ A++AV +L+ RWFGGR + A
Sbjct: 509 DMAKRAVANLDGRWFGGRQISA 530
>gi|225710884|gb|ACO11288.1| Splicing factor 45 [Caligus rogercresseyi]
Length = 417
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 64 HYDNFFE-DVFVECEDKYGEIEEMNV---CDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
D F E +V EC +KYG++ ++ + ++ + ++I+F+R E A KAV DLN
Sbjct: 333 EVDEFLEPEVKEECNEKYGDVIKVVIYEFSNSSAEENAVRIFIEFKRVESAIKAVVDLNG 392
Query: 120 RWFGGRPVYA 129
R+FGGR V A
Sbjct: 393 RFFGGREVQA 402
>gi|198473430|ref|XP_002133257.1| GA29081 [Drosophila pseudoobscura pseudoobscura]
gi|198139453|gb|EDY70659.1| GA29081 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL--VGNVYIKFRREEDAEKAV 114
DEE++ + EC KYGE+ + + + G ++++F+R E A KAV
Sbjct: 337 VDEELEPEVKD-------ECNTKYGEVNSVIIHEAFGTSPEDAVKIFVEFKRIESAIKAV 389
Query: 115 NDLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 390 VDLNGRFFGGRQVRA 404
>gi|195164546|ref|XP_002023107.1| GL21138 [Drosophila persimilis]
gi|194105192|gb|EDW27235.1| GL21138 [Drosophila persimilis]
Length = 418
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL--VGNVYIKFRREEDAEKAV 114
DEE++ + EC KYGE+ + + + G ++++F+R E A KAV
Sbjct: 337 VDEELEPEVKD-------ECNTKYGEVNSVIIHEAFGTSPEDAVKIFVEFKRIESAIKAV 389
Query: 115 NDLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 390 VDLNGRFFGGRQVRA 404
>gi|308801273|ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
gi|116056401|emb|CAL52690.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
Length = 388
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 55 NVTDEEMQ--EHYDNFFEDVFVECEDKYGEIEEMNVC--DNLGDHL--VGNVYIKFRREE 108
+T+EE+ E ++N ED+ EC KYG+I + + G+ + +G V++++ E
Sbjct: 296 GITEEELADDEEFENIMEDMNEEC-GKYGKIISVVIPRPSKSGESVTGIGKVFVRYESVE 354
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTDF 137
DA KA + LN R FGG V A+ + F
Sbjct: 355 DATKARDALNGRRFGGNSVVADFIDIESF 383
>gi|325191172|emb|CCA25959.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 553
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 29 QTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEH--YDNFFEDVFVECEDKYGEIEEM 86
QTI + +++ P S L + VT EE+++ Y + +D+ ECE +YG + +
Sbjct: 437 QTISMAGVHLGPIGSPSRV--LVLRNMVTPEELEDEDEYRDIMDDIRSECE-RYGRVTTI 493
Query: 87 NVC---DNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAE 130
+ + GD +G VYI+F ++ A N+L+ R F R V A+
Sbjct: 494 ILPRAKEGYGDEALGKVYIEFGDISTSQAAANELHGRGFANRVVSAQ 540
>gi|195051308|ref|XP_001993070.1| GH13625 [Drosophila grimshawi]
gi|193900129|gb|EDV98995.1| GH13625 [Drosophila grimshawi]
Length = 451
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG----DHLVGNVYIKFRREEDAEK 112
DEE++ + EC KYGE+ + + + G D + ++++F+R E A K
Sbjct: 370 VDEELEPEVKD-------ECNTKYGEVNSVIIHEAFGTVPEDAV--KIFVEFKRIESAIK 420
Query: 113 AVNDLNNRWFGGRPVYA 129
AV DLN R+FGGR V A
Sbjct: 421 AVVDLNGRFFGGRQVRA 437
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV E E+KYG + + L + +G++Y+KF + + E A+ LN R+FGGR + A
Sbjct: 537 DDVRQEAEEKYGHVVHVA----LDPNSIGDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 592
Query: 130 ELSPVTD 136
+PV D
Sbjct: 593 --APVVD 597
>gi|195116165|ref|XP_002002626.1| GI11727 [Drosophila mojavensis]
gi|193913201|gb|EDW12068.1| GI11727 [Drosophila mojavensis]
Length = 438
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG----DHLVGNVYIKFRREEDAEK 112
DEE++ + EC KYGE+ + + + G D + ++++F+R E A K
Sbjct: 357 VDEELEPEVKD-------ECNTKYGEVNSVIIHEAFGTVPEDAV--KIFVEFKRIESAIK 407
Query: 113 AVNDLNNRWFGGRPVYA 129
AV DLN R+FGGR V A
Sbjct: 408 AVVDLNGRFFGGRQVRA 424
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 59 EEMQEHYDNFF---------EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREED 109
EEM+ ++ N + +D F E +KYG+I ++ + + G ++ F R ED
Sbjct: 229 EEMKANFTNIYVKNIDAETTDDEFRELFEKYGQITSASLAHDDQGKVRGFGFVNFIRHED 288
Query: 110 AEKAVNDLNNRWFGGRPVYAELSPVTDFREACCR-QYE 146
A KAV++LN+ F G+ +Y + RE R QYE
Sbjct: 289 AAKAVDELNDLDFKGQKLYVGRAQKKHEREEELRKQYE 326
>gi|300123623|emb|CBK24895.2| unnamed protein product [Blastocystis hominis]
Length = 465
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 23 NKPTFSQTILLLN---LYINPQNSAK-----SADGSHLISNVTDEEMQE--HYD-NFFED 71
N PT T+ +N NP +AK +A ++ N+ + +++ H+D + ED
Sbjct: 323 NDPTLLDTMNQVNNRGQIANPAGAAKPTIEGNASNCLVLHNMFNSAIEQGPHWDIDIQED 382
Query: 72 VFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 131
V EC+ KYG I V N G+VY+ F + A ND+N RW+ GR V
Sbjct: 383 VRTECQ-KYGAILHCFVDKNSS----GDVYLMFDNMNSCQNAANDMNGRWYDGRVVQVSY 437
Query: 132 SPVTDF 137
P ++
Sbjct: 438 MPSGEY 443
>gi|332022266|gb|EGI62581.1| Splicing factor 45 [Acromyrmex echinatior]
Length = 383
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 64 HYDNFFE-DVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
DN E +V EC KYG++ + V + L + V ++++F+R E A KAV DLN
Sbjct: 300 EVDNDLEPEVKDECNTKYGDVARVIIHEVIEALPEEAV-RIFVEFKRIESAIKAVVDLNG 358
Query: 120 RWFGGRPVYA 129
R+FGGR V A
Sbjct: 359 RFFGGRTVKA 368
>gi|241561670|ref|XP_002401206.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
gi|215499816|gb|EEC09310.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
Length = 409
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 107 EEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHL 161
EE+A +A+ N RW+ GR + E SPV ++ A C + C + CNF+H+
Sbjct: 156 EEEATRALVMFNGRWYAGRQISCEFSPVQRWKSAICGLFFRNRCPKGRGCNFLHV 210
>gi|195385190|ref|XP_002051289.1| GJ13092 [Drosophila virilis]
gi|194147746|gb|EDW63444.1| GJ13092 [Drosophila virilis]
Length = 432
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG----DHLVGNVYIKFRREEDAEK 112
DEE++ + EC KYGE+ + + + G D + ++++F+R E A K
Sbjct: 351 VDEELEPEVKD-------ECNTKYGEVNSVIIHEAFGTVPEDAV--KIFVEFKRIESAIK 401
Query: 113 AVNDLNNRWFGGRPVYA 129
AV DLN R+FGGR V A
Sbjct: 402 AVVDLNGRFFGGRQVRA 418
>gi|242015516|ref|XP_002428399.1| Splicing factor, putative [Pediculus humanus corporis]
gi|212513011|gb|EEB15661.1| Splicing factor, putative [Pediculus humanus corporis]
Length = 402
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 66 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
D+ +V EC KYGE+ ++ + D D + ++++F+R E A KAV DLN R+F
Sbjct: 322 DDLEPEVKDECNTKYGEVIKVLIFEMPDAPQDEAI-RIFVEFKRIESAIKAVVDLNGRFF 380
Query: 123 GGRPVYA 129
GGR V A
Sbjct: 381 GGRQVKA 387
>gi|403223876|dbj|BAM42006.1| uncharacterized protein TOT_040000383 [Theileria orientalis strain
Shintoku]
Length = 478
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 34 LNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG 93
+ + + P++S +I N+ + + + +N +V EC +KYG + + + +
Sbjct: 373 VQVTMAPESSVAGTSNVIVIQNMIEASLAD--ENLPNEVKEEC-NKYGLVTSVYLHFSPN 429
Query: 94 DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 131
D L +V++ F EDAE AV LN RWF GR + +L
Sbjct: 430 DTL--SVFVVFNTVEDAENAVRSLNTRWFNGRQLMCKL 465
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 52 LISNVTDEEMQ--EHYDNFFEDVFVECEDKYGEIEEMNVC------DNLGDHLVGNVYIK 103
L++ VT EE+ + Y+ EDV EC KYG++EE+ + +N G VG +++K
Sbjct: 253 LLNMVTPEELMDPQEYEEIQEDVHEECS-KYGKVEELKIPRPQPPKENKG---VGKIFVK 308
Query: 104 FRREEDAEKAVNDLNNRWFGGRPV 127
+ E A+KA+ L R F R V
Sbjct: 309 YDTPESAQKALRALAGRKFADRTV 332
>gi|357623541|gb|EHJ74651.1| splicing factor 45 [Danaus plexippus]
Length = 394
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVN 115
DEE++ + EC KYGE+ ++ + N ++++F+R E A KAV
Sbjct: 313 DEELEPEVKD-------ECNTKYGEVVKVLIFEMPNAPSDEAVRIFVEFKRIESAIKAVV 365
Query: 116 DLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 366 DLNGRFFGGRQVKA 379
>gi|320165239|gb|EFW42138.1| hypothetical protein CAOG_07523 [Capsaspora owczarzaki ATCC 30864]
Length = 598
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 36 LYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDH 95
+Y Q A+ SH+++ + + E ++V EC + +G +E + V +
Sbjct: 493 VYALMQKLARGTTSSHIVALLNMIDADEIDSMLEQEVGGECSN-FGTVERVVVHVTSKND 551
Query: 96 LVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 131
+ ++++F + E+A+ AV LNNRWFGGR V A+L
Sbjct: 552 VA--IFVQFAQLEEADAAVLALNNRWFGGRQVRAQL 585
>gi|322800820|gb|EFZ21695.1| hypothetical protein SINV_12429 [Solenopsis invicta]
Length = 242
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 66 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 162 DDLEPEVKDECNTKYGDVARVIIHEVIEATPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 220
Query: 123 GGRPVYA 129
GGR V A
Sbjct: 221 GGRQVKA 227
>gi|348684008|gb|EGZ23823.1| hypothetical protein PHYSODRAFT_255134 [Phytophthora sojae]
Length = 534
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 66 DNFFEDVFVECEDKYGEIEE---MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
D ++V EC +KYG + + V ++ ++++F+ EDA KA+ LN R+F
Sbjct: 454 DELQDEVKGECSEKYGPVAKCTIYEVTGSVPPEEAVRIFVQFQDAEDATKALTGLNGRFF 513
Query: 123 GGRPVYA 129
GGR V A
Sbjct: 514 GGRKVKA 520
>gi|223946691|gb|ACN27429.1| unknown [Zea mays]
Length = 316
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
DEE+ + DV EC K+G ++ + VC+N H G + +KF+ +D K +
Sbjct: 218 ADEELLSELET---DVREEC-IKFGPVDNVKVCEN---HPQGVILVKFKDRKDGAKCIEK 270
Query: 117 LNNRWFGGRPVYA 129
+N RWF G+ ++A
Sbjct: 271 MNGRWFAGQQIHA 283
>gi|195433330|ref|XP_002064668.1| GK23713 [Drosophila willistoni]
gi|194160753|gb|EDW75654.1| GK23713 [Drosophila willistoni]
Length = 443
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL--VGNVYIKFRREEDAEKAV 114
DEE++ + EC KYGE+ + + + G ++++F+R E A KAV
Sbjct: 362 VDEELEPEVKD-------ECNTKYGEVNSVIIHEAFGTTPEDAVKIFVEFKRIESAIKAV 414
Query: 115 NDLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 415 VDLNGRFFGGRQVRA 429
>gi|114051960|ref|NP_001040441.1| RNA binding motif protein 17 [Bombyx mori]
gi|95102902|gb|ABF51392.1| RNA binding motif protein 17 [Bombyx mori]
Length = 392
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVN 115
DEE++ + EC KYGE+ ++ + N+ + ++F+R E A KAV
Sbjct: 311 DEELEPEVKD-------ECNTKYGEVVKVLIFEMPNVPSDEAVRILVEFKRMESAIKAVV 363
Query: 116 DLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 364 DLNGRFFGGRQVKA 377
>gi|170054316|ref|XP_001863072.1| splicing factor 45 [Culex quinquefasciatus]
gi|167874592|gb|EDS37975.1| splicing factor 45 [Culex quinquefasciatus]
Length = 399
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 66 DNFFEDVFVECEDKYGEIEE--MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 123
D+ +V EC KYG++ +N N+ ++++F+R E A KAV DLN R+FG
Sbjct: 320 DDLEPEVKDECHTKYGDVITVVINEIPNVVPEETVRIFVEFKRMESAIKAVVDLNGRFFG 379
Query: 124 GRPVYA 129
GR V A
Sbjct: 380 GRQVRA 385
>gi|414588676|tpg|DAA39247.1| TPA: hypothetical protein ZEAMMB73_120405 [Zea mays]
Length = 544
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
DEE+ + DV EC K+G ++ + VC+N H G + +KF+ +D K +
Sbjct: 446 ADEELLSELET---DVREEC-IKFGPVDNVKVCEN---HPQGVILVKFKDRKDGAKCIEK 498
Query: 117 LNNRWFGGRPVYA 129
+N RWF G+ ++A
Sbjct: 499 MNGRWFAGQQIHA 511
>gi|334311921|ref|XP_001368201.2| PREDICTED: HIV Tat-specific factor 1-like [Monodelphis domestica]
Length = 555
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ ECE K+G+++++ V D H G + ++ E+A+ + LN RWFGGR +
Sbjct: 401 EDLRSECE-KFGQVKKVLVFDR---HPDGVASVSYKEPEEADLCIQALNGRWFGGRQLNV 456
Query: 130 EL-SPVTDFR 138
E+ VTDF+
Sbjct: 457 EVWDGVTDFQ 466
>gi|339244819|ref|XP_003378335.1| poly(U)-binding-splicing factor half pint [Trichinella spiralis]
gi|316972769|gb|EFV56420.1| poly(U)-binding-splicing factor half pint [Trichinella spiralis]
Length = 609
Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 56 VTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCD---NLGDHLVGNVYIKFRREEDAEK 112
++ EE+ E+ E++ EC K+GE+E++ + N + +++K+ E+AEK
Sbjct: 522 ISPEEVDEYLQ---EEITEEC-GKFGEVEQVVIYQEKPNEDAPAIVKIFVKYSNPEEAEK 577
Query: 113 AVNDLNNRWFGGRPVYAELSPVTDF 137
A + +NR+F GR + AEL T F
Sbjct: 578 AQSTFHNRFFSGRQITAELYDQTMF 602
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 17 RCSRIHNKPTFSQTIL----LLNLYINPQNSAKSADGSHLI-SNV---TDEEMQEH---Y 65
R +R + PT ++T L ++ P NSA +++ SN+ TD ++ E +
Sbjct: 350 RLNRDGDLPTSNKTSLDAAKVIPGVSAPGNSATVGVTENIVLSNMFSATDPQIMEDPEFF 409
Query: 66 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 125
+ EDV EC+ KYG + ++ + ++ D G V++KF E A A LN+R+FGG
Sbjct: 410 TDLVEDVKSECK-KYGNVLQVYINKSVPD---GMVWVKFATVEQAVAAFQSLNDRFFGGN 465
Query: 126 PVYAELS 132
+ A +
Sbjct: 466 SISAAFA 472
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 66 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 125
D+ ++ E ++G I V +L G ++ F E+A KAV ++N R FGG+
Sbjct: 295 DSIDDEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGK 354
Query: 126 PVYAELSPVTDFREACCRQYEM 147
P+Y L+ + R+A +Q M
Sbjct: 355 PLYVGLAQRKEDRKAHLQQQYM 376
>gi|340719031|ref|XP_003397961.1| PREDICTED: splicing factor 45-like [Bombus terrestris]
Length = 382
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 66 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 302 DDLEPEVKDECNTKYGDVARVIIHEVTEAAPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 360
Query: 123 GGRPVYA 129
GGR V A
Sbjct: 361 GGRQVKA 367
>gi|299745153|ref|XP_001831503.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|298406457|gb|EAU90350.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 550
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 24/103 (23%)
Query: 52 LISNVTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNVCDNL-------GDHL------ 96
+++ VT +++ E Y + +EDV EC KYGE+E++ + + G+
Sbjct: 420 MLNMVTPDDLIDDEEYGDLYEDVKEECS-KYGEVEDLRIPRPVKKDKAKWGEGQISAQDA 478
Query: 97 --------VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 131
VG VY+K+ E A KA+N L R F GR + A L
Sbjct: 479 QRIDEAAGVGRVYVKYADTEGANKALNSLAGRSFAGRSIIATL 521
>gi|296083389|emb|CBI23344.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K G ++ + VC++ H G V +K++ DA+K + +N RWFGGR ++A
Sbjct: 221 DVQEEC-IKLGSVDLVKVCES---HPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHA 275
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 26 TFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEH---YDNFFEDVFVECEDKYGE 82
+ T ++ IN Q + A ++SN+ D + + + +DV EC +K+G
Sbjct: 383 ALNMTPVVTAPQINQQTAPPIATQCFMLSNMFDPQNENNSLWVKEIRDDVIEEC-NKHGG 441
Query: 83 IEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDF 137
+ + V D GNVY+K A AVN L+ RWF GR + A PV ++
Sbjct: 442 VLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITAAYVPVVNY 493
>gi|158300105|ref|XP_320093.4| AGAP009296-PA [Anopheles gambiae str. PEST]
gi|157013841|gb|EAA15153.4| AGAP009296-PA [Anopheles gambiae str. PEST]
Length = 426
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 66 DNFFEDVFVECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 123
D +V EC KYG++ + + N+ ++++F+R E A KAV DLN R+FG
Sbjct: 346 DELEPEVKDECNTKYGDVVTVVIHEVPNVVPEEAVRIFVEFKRMESAIKAVVDLNGRFFG 405
Query: 124 GRPVYA 129
GR V A
Sbjct: 406 GRQVRA 411
>gi|359495884|ref|XP_003635108.1| PREDICTED: HIV Tat-specific factor 1 homolog, partial [Vitis
vinifera]
Length = 322
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K G ++ + VC++ H G V +K++ DA+K + +N RWFGGR ++A
Sbjct: 235 DVQEEC-IKLGSVDLVKVCES---HPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHA 289
>gi|296080862|emb|CBI18792.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K G ++ + VC++ H G V +K++ DA+K + +N RWFGGR ++A
Sbjct: 399 DVQEEC-IKLGSVDLVKVCES---HPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHA 453
>gi|294462381|gb|ADE76739.1| unknown [Picea sitchensis]
Length = 525
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
D+ EC K G IE + V +N H +G + +KF+ D K + +N RWFGGR + A
Sbjct: 439 DIAEECS-KVGPIERIKVYEN---HPLGAILVKFKDRRDGLKCIQLMNGRWFGGRQIQA 493
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 52 LISNVTD---EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++SN+ D E M + +DV EC +K+G + ++V D GNVY+K +
Sbjct: 560 MLSNMFDPQAETMLGWETDIRDDVIEEC-NKHGGVLHIHV-DKASPQ--GNVYVKCPTAQ 615
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTDF 137
A A+N+L+NRWF G+ + A PV ++
Sbjct: 616 IAMAALNNLHNRWFAGKMITAAYMPVANY 644
>gi|224098794|ref|XP_002311268.1| predicted protein [Populus trichocarpa]
gi|222851088|gb|EEE88635.1| predicted protein [Populus trichocarpa]
Length = 624
Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K G I+ + VC+N H G V ++F+ DA + + +N RWFGGR ++A
Sbjct: 538 DVREECV-KLGPIDSIKVCEN-NPH--GVVLVRFKDRNDARRCIELMNGRWFGGREIHA 592
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 52 LISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGN-----VYIKFRR 106
L++N+ E E D E+V +EC KYG++ ++ + ++ DH+ +++ F
Sbjct: 441 LLTNMIGPE--EVDDELKEEVKIECS-KYGKVYDVRI--HISDHVSKPSDRVRIFVVFET 495
Query: 107 EEDAEKAVNDLNNRWFGGRPVYAEL 131
A+ AV LNNRWFGG VY L
Sbjct: 496 NTMAQIAVPALNNRWFGGNQVYCRL 520
>gi|350399021|ref|XP_003485388.1| PREDICTED: splicing factor 45-like [Bombus impatiens]
Length = 383
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 66 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 303 DDLEPEVKDECNTKYGDVARVIIHEVTEAAPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 361
Query: 123 GGRPVYA 129
GGR V A
Sbjct: 362 GGRQVKA 368
>gi|66516089|ref|XP_393194.2| PREDICTED: splicing factor 45-like [Apis mellifera]
gi|380028015|ref|XP_003697707.1| PREDICTED: splicing factor 45-like [Apis florea]
Length = 381
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 66 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 301 DDLEPEVKDECNTKYGDVARVIIHEVTEAAPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 359
Query: 123 GGRPVYA 129
GGR V A
Sbjct: 360 GGRQVKA 366
>gi|193613005|ref|XP_001950928.1| PREDICTED: splicing factor 45-like [Acyrthosiphon pisum]
gi|193629687|ref|XP_001945492.1| PREDICTED: splicing factor 45-like [Acyrthosiphon pisum]
Length = 404
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 75 ECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EC KYG++ ++ + N+ ++++F+R E A KAV DLN R+FGGR V A
Sbjct: 333 ECNTKYGDVNKVVIYEVPNVDHEEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKA 389
>gi|430813569|emb|CCJ29085.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 545
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 51 HLISNVTDEEMQE--HYDNFFEDVFVECEDKYGEIEEMNVCDNLG----DHLVGNVYIKF 104
+ + VT EE+Q+ Y+ ED+ EC KYG++ ++ + +G + VG VY++F
Sbjct: 450 QMFNMVTPEELQDDDEYEEISEDIRDECS-KYGKVLDLKIPRGIGGSRSNFGVGKVYVRF 508
Query: 105 RREEDAEKAVNDLNNRWFGGRPVYAELSP 133
E KA+ DL R F R V P
Sbjct: 509 ETEMSCLKAMKDLAGRKFSDRTVLTSFYP 537
>gi|307184500|gb|EFN70889.1| Splicing factor 45 [Camponotus floridanus]
Length = 380
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 66 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 300 DDLEPEVKDECNTKYGDVARVIIHEVIEAAPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 358
Query: 123 GGRPVYA 129
GGR V A
Sbjct: 359 GGRQVKA 365
>gi|383858690|ref|XP_003704832.1| PREDICTED: splicing factor 45-like [Megachile rotundata]
Length = 382
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 66 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
D+ +V EC KYG++ + V + + V ++++F+R E A KAV DLN R+F
Sbjct: 302 DDLEPEVKDECNTKYGDVARVIIHEVTEAAPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 360
Query: 123 GGRPVYA 129
GGR V A
Sbjct: 361 GGRQVKA 367
>gi|156542185|ref|XP_001599827.1| PREDICTED: splicing factor 45 [Nasonia vitripennis]
Length = 383
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 66 DNFFEDVFVECEDKYGEIEEM---NVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
D+ +V EC KYG++ + V D + V ++++F+R E A KAV DLN R+F
Sbjct: 303 DDLEPEVKDECNTKYGDVIRVVIHEVIDAQPEEAV-RIFVEFKRIESAIKAVVDLNGRFF 361
Query: 123 GGRPVYA 129
GGR V A
Sbjct: 362 GGRQVKA 368
>gi|384247050|gb|EIE20538.1| hypothetical protein COCSUDRAFT_54348 [Coccomyxa subellipsoidea
C-169]
Length = 213
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
Query: 52 LISNVTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNV---------CDNLGDHLVGNV 100
L + VT EE+ E Y + +D+ E E KYG + + + D G VG V
Sbjct: 115 LANMVTREELLDPEEYSDIVDDITSELESKYGTLSSLVIPQPSQKGPASDPSG---VGLV 171
Query: 101 YIKFRREEDAEKAVNDLNNRWFGGRPVYAE 130
+++F + DA KA LN R FG +++E
Sbjct: 172 FVQFPKLSDAVKAQEKLNGRKFGAGNIHSE 201
>gi|320165216|gb|EFW42115.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 570
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 44 AKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIK 103
A+ SH+++ + + E ++V EC + +G +E + V + + ++++
Sbjct: 473 ARGTTSSHIVALLNMIDADEIDSMLEQEVGGECSN-FGTVERVVVHVTSKNDVA--IFVQ 529
Query: 104 FRREEDAEKAVNDLNNRWFGGRPVYAEL 131
F + E+A+ AV LNNRWFGGR V A+L
Sbjct: 530 FAQLEEADAAVLALNNRWFGGRQVRAQL 557
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVC-DNLGDHL--VGNVYIKFRREEDAEKAVNDLNN 119
E Y + EDV EC+ ++G + M + G+ + +G +Y++F +EEDA A+ LN
Sbjct: 515 EEYADLAEDVEEECK-RFGGVTGMEIPRPKDGEEVPGLGCIYVRFGKEEDAVSALKALNG 573
Query: 120 RWFGGRPVYAELSPVTDFRE 139
R FGG V PV F +
Sbjct: 574 RKFGGNIVKVTYFPVDKFEK 593
>gi|325187011|emb|CCA21555.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 278
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 22/108 (20%)
Query: 26 TFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEE 85
T SQT++LLN + D S + ++T +++ D+ EC K+G++E
Sbjct: 174 TPSQTVILLNAW----------DPSGMQDDIT-----LYFNELEGDIHSEC-SKFGKVEH 217
Query: 86 MNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 133
+++ + G++ ++F E A+K + +N RWF GR + A P
Sbjct: 218 VHIAAD------GSIQVRFSALECAKKCLQVMNKRWFDGRQIIAMFDP 259
>gi|395860822|ref|XP_003802703.1| PREDICTED: HIV Tat-specific factor 1 homolog [Otolemur garnettii]
Length = 767
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ ++ LN RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDAEEADYCIHTLNGRWFGGRQITA 344
Query: 130 E-LSPVTDFR 138
E TD++
Sbjct: 345 EAWDGTTDYQ 354
>gi|359496942|ref|XP_003635379.1| PREDICTED: HIV Tat-specific factor 1 homolog [Vitis vinifera]
Length = 408
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K G ++ + VC++ H G V +K++ DA+K + +N RWFGGR ++A
Sbjct: 321 DVQEECI-KLGSVDLVKVCES---HPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHA 375
>gi|242061866|ref|XP_002452222.1| hypothetical protein SORBIDRAFT_04g021976 [Sorghum bicolor]
gi|241932053|gb|EES05198.1| hypothetical protein SORBIDRAFT_04g021976 [Sorghum bicolor]
Length = 88
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 1 VNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLLNLYINPQNSAKSADG 49
V+C F+ GAC G RC R+H P S T+L+ N+Y +P + + +G
Sbjct: 36 VHCPFHLMTGACCFGVRCGRVHFYPDKSSTLLMKNMYSDPGLALEQDEG 84
>gi|413924809|gb|AFW64741.1| hypothetical protein ZEAMMB73_003429 [Zea mays]
Length = 475
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K+G ++ + VC+N H G + ++F+ +D K + +N RWF GR ++A
Sbjct: 388 DVREEC-IKFGPVDNVKVCEN---HPQGVILVRFKDRKDGAKCIEKMNGRWFAGRQIHA 442
>gi|59862144|gb|AAH90381.1| htatsf1-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 524
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ ECE K+G+++++ + D H G + F+ E+ + + LN RWFGGR +
Sbjct: 366 EDLRSECE-KFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIV 421
Query: 130 E-LSPVTDFR 138
E VTD++
Sbjct: 422 ESWDGVTDYQ 431
>gi|335306576|ref|XP_003360505.1| PREDICTED: HIV Tat-specific factor 1 homolog [Sus scrofa]
Length = 760
Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 E 130
E
Sbjct: 345 E 345
>gi|86438143|gb|AAI12691.1| HTATSF1 protein [Bos taurus]
Length = 524
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + LN RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITA 344
Query: 130 E-LSPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|321465609|gb|EFX76609.1| hypothetical protein DAPPUDRAFT_306107 [Daphnia pulex]
Length = 381
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 75 ECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EC+ KYG++ ++ + N + ++++F+R E A KAV DLN R+F GR V A
Sbjct: 310 ECQTKYGDVNKVVIFEVPNAEEEEAVRIFVEFKRMEAAIKAVIDLNGRFFAGRQVKA 366
>gi|334350282|ref|XP_001362589.2| PREDICTED: HIV Tat-specific factor 1-like [Monodelphis domestica]
Length = 444
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ ECE K+G+++++ + D H G + ++ E+A+ + LN RWFGGR ++
Sbjct: 288 EDLRTECE-KFGQVKKVLLFDR---HPDGVASVSYKEPEEADLCIQALNGRWFGGRQLHV 343
Query: 130 EL-SPVTDFR 138
E+ VTD++
Sbjct: 344 EVWDGVTDYQ 353
>gi|242021379|ref|XP_002431122.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
gi|212516371|gb|EEB18384.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
Length = 571
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 60 EMQEHYDNFFEDVFVECEDKYGEIEEMNV-----CDNLGDHLVGNVYIKFRREEDAEKAV 114
E QE + E++ EC KYG +E + + DN ++ ++++F R +AE A
Sbjct: 483 EPQEVDETLQEEIQDECS-KYGVVERVIIYNEKQSDNDDSDIIVKIFVEFSRTSEAESAR 541
Query: 115 NDLNNRWFGGRPVYAEL 131
+ LN R+FGGR V L
Sbjct: 542 DALNGRYFGGRLVKCSL 558
>gi|226496095|ref|NP_001141229.1| uncharacterized protein LOC100273316 [Zea mays]
gi|194703396|gb|ACF85782.1| unknown [Zea mays]
gi|413924810|gb|AFW64742.1| hypothetical protein ZEAMMB73_003429 [Zea mays]
Length = 460
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K+G ++ + VC+N H G + ++F+ +D K + +N RWF GR ++A
Sbjct: 373 DVREEC-IKFGPVDNVKVCEN---HPQGVILVRFKDRKDGAKCIEKMNGRWFAGRQIHA 427
>gi|440633242|gb|ELR03161.1| hypothetical protein GMDG_05987 [Geomyces destructans 20631-21]
Length = 559
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 51 HLISNVTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL----VGNVYIKF 104
L++ VT EE+ E Y+ EDV ECE KYG++ ++ + G VG +++KF
Sbjct: 463 QLLNMVTAEELIDNEDYEEILEDVKEECE-KYGKVLDIKIPRPSGGSRQSAGVGKIFVKF 521
Query: 105 RREEDAEKAVNDLNNRWFGGRPV 127
A KA+ L R F R V
Sbjct: 522 DTPASAGKALRTLAGRKFADRTV 544
>gi|389612784|dbj|BAM19802.1| conserved hypothetical protein, partial [Papilio xuthus]
Length = 396
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 58 DEEMQEHYDNFFEDVFVECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVN 115
DEE++ + EC KYG++ ++ + N + ++++F+R E A KAV
Sbjct: 317 DEELEPEVKD-------ECNTKYGDVIKVVIFEMPNAPNDEAVRIFVEFKRIESAIKAVV 369
Query: 116 DLNNRWFGGRPVYA 129
DLN R+FGGR V A
Sbjct: 370 DLNGRFFGGRQVKA 383
>gi|242092048|ref|XP_002436514.1| hypothetical protein SORBIDRAFT_10g003990 [Sorghum bicolor]
gi|241914737|gb|EER87881.1| hypothetical protein SORBIDRAFT_10g003990 [Sorghum bicolor]
Length = 384
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 66 DNFFEDVFVECEDKYGEIE-----EMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
D ++V EC KYG + E+ D D V ++I+F R E+A KA+ DL R
Sbjct: 293 DELEDEVASECA-KYGTVSRVLIFEITQADFPADEAV-RIFIQFERAEEATKAMVDLQGR 350
Query: 121 WFGGRPVYA 129
+FGGR V A
Sbjct: 351 FFGGRVVQA 359
>gi|354475309|ref|XP_003499872.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cricetulus griseus]
Length = 714
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 216 EDLRVECA-KFGQIKKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITA 271
Query: 130 EL-SPVTDFR 138
E TD++
Sbjct: 272 EAWDGTTDYQ 281
>gi|159164131|pdb|2DIT|A Chain A, Solution Structure Of The Rrm_1 Domain Of Hiv Tat Specific
Factor 1 Variant
Length = 112
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 41 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 96
Query: 130 E 130
+
Sbjct: 97 Q 97
>gi|148710217|gb|EDL42163.1| HIV TAT specific factor 1, isoform CRA_c [Mus musculus]
Length = 464
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 193 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITA 248
Query: 130 E-LSPVTDFR 138
+ TD++
Sbjct: 249 QAWDGTTDYQ 258
>gi|195380577|ref|XP_002049047.1| GJ20975 [Drosophila virilis]
gi|194143844|gb|EDW60240.1| GJ20975 [Drosophila virilis]
Length = 428
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 52 LISNVTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL---VGNVYIKFRR 106
L++ V E+ + Y++ D+ EC KYG+++ + + +GD G V+++F
Sbjct: 333 LLNMVLPSELLDNDEYEDIRTDIKQECA-KYGKVKSLKIPRPIGDPPQTGCGKVFVRFES 391
Query: 107 EEDAEKAVNDLNNRWFGGRPV 127
ED +KA+N L+ R F GR V
Sbjct: 392 IEDCKKALNALSGRKFSGRIV 412
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 41 QNSAKSADGSHLISNVTDE--EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVG 98
Q+S A L+SN+ D E +D ED +E +K+G + + V G
Sbjct: 409 QDSPAIATQCFLLSNMFDPATETNPSWDVEIEDDVIEECNKHGGVLHVYVDKQ---SPAG 465
Query: 99 NVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDF 137
NVY+K A AVN L+ RWF GR + A P+ ++
Sbjct: 466 NVYVKCPSIATAVLAVNALHGRWFAGRVIAAAYVPLVNY 504
>gi|10798632|emb|CAC12816.1| hypothetical protein [Nicotiana tabacum]
Length = 86
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 79 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
K+G ++ + VC+N H G V +KF+ DA + +N RWF GR ++A
Sbjct: 6 KFGPVDLVKVCEN---HPQGVVLVKFKDRRDAHRCTEAMNGRWFAGRQIHA 53
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K E A +V L+ RWFGGR + A
Sbjct: 417 DDVIEEC-NKHGGVLHVYV-DKASPQ--GNVYVKCTTIETALASVAALHGRWFGGRVITA 472
Query: 130 ELSPVTDF 137
PVT++
Sbjct: 473 AYVPVTNY 480
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 66 DNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 125
D+ ++ E ++G I V +L G ++ F E+A KAV ++N R FGG+
Sbjct: 295 DSIDDEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGK 354
Query: 126 PVYAELSPVTDFREACCRQYEM 147
P+Y L+ + R+A +Q M
Sbjct: 355 PLYVGLAQRKEDRKAHLQQQYM 376
>gi|118390069|ref|XP_001028025.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila]
gi|89309795|gb|EAS07783.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila SB210]
Length = 480
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 36 LYINPQNSAKSADGSHLISNVTDEEMQEH--YDNFFEDVFVECEDKYGEIEEMNV---CD 90
L P+ ++ + L++ V+ E++ E D+ ++DV ECE K G +E++ + C
Sbjct: 363 LLTIPEFTSLPSRVIQLLNMVSIEDLFEDDIVDDLYQDVMTECE-KIGPVEKIEIPKPCK 421
Query: 91 NLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDF 137
G +G V++KF+ A+KA LN R + R V A P F
Sbjct: 422 TTGICPPCIGKVFVKFKYMLKAKKARYSLNGRTYNRRTVIASFYPEDKF 470
>gi|194697730|gb|ACF82949.1| unknown [Zea mays]
gi|414885813|tpg|DAA61827.1| TPA: splicing factor 45 [Zea mays]
Length = 382
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 66 DNFFEDVFVECEDKYGEIE-----EMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
D ++V EC KYG + E+ D D V ++I+F R E+A KA+ DL R
Sbjct: 291 DELEDEVASECA-KYGTVSRVLIFEITQADFPADEAV-RIFIQFERAEEATKAMIDLQGR 348
Query: 121 WFGGRPVYA 129
+FGGR V A
Sbjct: 349 FFGGRVVQA 357
>gi|169642352|gb|AAI60527.1| htatsf1 protein [Xenopus (Silurana) tropicalis]
Length = 389
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ ECE K+G+++++ + D H G + F+ E+ + + LN RWFGGR +
Sbjct: 231 EDLRSECE-KFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIV 286
Query: 130 E-LSPVTDFR 138
E VTD++
Sbjct: 287 ESWDGVTDYQ 296
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 52 LISNVTDE--EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREED 109
L+SN+ D E +D ED +E +K+G + + V ++ GNVY+K
Sbjct: 440 LLSNMFDPTTETNPTWDTEIEDDVIEECNKHGGVLHVYVDK---ENPAGNVYVKCPSIAT 496
Query: 110 AEKAVNDLNNRWFGGRPVYAELSPVTDF 137
A AVN L+ RWF GR + A P+ ++
Sbjct: 497 AVLAVNALHGRWFAGRIITAAYVPLVNY 524
>gi|361128675|gb|EHL00605.1| putative RNA-binding protein rsd1 [Glarea lozoyensis 74030]
Length = 694
Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
++V E E KYG + + + N G++Y+KF R + E A+ LN R+F GR + A
Sbjct: 617 DEVRAEAEAKYGHVVHIAIDPNSD----GDIYLKFDRVQGGENAIKGLNGRFFDGRTINA 672
Query: 130 ELSPVTD 136
+PV D
Sbjct: 673 --TPVVD 677
>gi|384493179|gb|EIE83670.1| hypothetical protein RO3G_08375 [Rhizopus delemar RA 99-880]
Length = 475
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 27/106 (25%)
Query: 28 SQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMN 87
S+TILL N+ G + ++ EE E EC KYG++E
Sbjct: 370 SKTILLTNMV-----------GPGEVDDMLQEETAE-----------EC-SKYGKVERCL 406
Query: 88 VCD----NLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+ + + +H +++KF E A++A+ DLN R+FGGR V A
Sbjct: 407 IFEVPRGQVPEHKAVRIFVKFSDVESAKRAIQDLNGRFFGGRSVSA 452
>gi|226497132|ref|NP_001149789.1| LOC100283416 [Zea mays]
gi|195634671|gb|ACG36804.1| splicing factor 45 [Zea mays]
Length = 382
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 66 DNFFEDVFVECEDKYGEIE-----EMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
D ++V EC KYG + E+ D D V ++I+F R E+A KA+ DL R
Sbjct: 291 DELEDEVASECA-KYGTVSRVLIFEITQADFPADEAV-RIFIQFERAEEATKAMIDLQGR 348
Query: 121 WFGGRPVYA 129
+FGGR V A
Sbjct: 349 FFGGRVVQA 357
>gi|301606045|ref|XP_002932639.1| PREDICTED: HIV Tat-specific factor 1 homolog [Xenopus (Silurana)
tropicalis]
Length = 452
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ ECE K+G+++++ + D H G + F+ E+ + + LN RWFGGR +
Sbjct: 294 EDLRSECE-KFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIV 349
Query: 130 E-LSPVTDFR 138
E VTD++
Sbjct: 350 ESWDGVTDYQ 359
>gi|303279518|ref|XP_003059052.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460212|gb|EEH57507.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 515
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 22/106 (20%)
Query: 25 PTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIE 84
P +QT+LL NL+ +P+ +E E +++ EDV EC K+G +
Sbjct: 419 PIPTQTLLLKNLF-DPK----------------EETEPEWWNDIAEDVKDEC-GKHGAVA 460
Query: 85 EMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAE 130
+V + G VY+KF + AE+A L++RWF GR + AE
Sbjct: 461 HCHVDKDSE----GFVYLKFAEVKGAERAQAALHSRWFAGRMIAAE 502
>gi|384498314|gb|EIE88805.1| hypothetical protein RO3G_13516 [Rhizopus delemar RA 99-880]
Length = 199
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 44 AKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDK--------YGEIEEMNVC-DNLGD 94
A A S + E+ H+ F D+ E ++ +G + E +V D +
Sbjct: 54 ANWAQPSSSVQQTIKEDTTHHFHIFVGDLAPEITNETLAQAFSVFGTMSEAHVMWDPMSG 113
Query: 95 HLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPV 127
G ++ FR + DAEKA+ +N W G RPV
Sbjct: 114 KSRGFGFVAFRDKADAEKAIATMNGEWLGSRPV 146
>gi|325188176|emb|CCA22716.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 401
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 52 LISN-VTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
L+ N VT +E+ +H +V EC KYG + + + ++++F +DA
Sbjct: 311 LLQNMVTPDEVDDH---LGSEVKEECSQKYGPVRNCIIYKVVSHPEAIRIFVEFENVQDA 367
Query: 111 EKAVNDLNNRWFGGRPVYA 129
++AV LN R+FGGR V A
Sbjct: 368 DRAVAGLNGRFFGGRKVLA 386
>gi|344297715|ref|XP_003420542.1| PREDICTED: HIV Tat-specific factor 1 homolog [Loxodonta africana]
Length = 743
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I+++ + D H G + FR E+A+ ++ L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIKKLILFDR---HPDGVASVSFRDPEEADYCIHTLDGRWFGGRQITA 344
Query: 130 E-LSPVTDFR 138
E TD++
Sbjct: 345 EAWDGTTDYQ 354
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 52 LISNVTDEEMQEH---YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
++SN+ D + H + +DV EC +K+G + + V D GNVY+K
Sbjct: 266 MLSNMFDSSSETHPLWHQEICDDVMDEC-NKHGGVLHIYV-DKASPQ--GNVYVKCPSVT 321
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTDF 137
A AVN L+ RWF GR + A P+ ++
Sbjct: 322 VAVNAVNALHGRWFAGRIITAAYVPLINY 350
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 67 NFFEDVFVECEDKYGEIEEMNV-CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGR 125
N ED+ + +G+IE M + D G +I FR EDA+KA+ LN GR
Sbjct: 120 NITEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAMEQLNGFELAGR 179
Query: 126 PV 127
P+
Sbjct: 180 PM 181
>gi|168001531|ref|XP_001753468.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695347|gb|EDQ81691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 358
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV EC K G IE + V +N H G V +KF+ + K + +N RWFGG+ + A
Sbjct: 273 EDVMTECT-KIGPIERLRVYEN---HPEGVVMVKFKDKTAGLKCIEIMNGRWFGGKQIEA 328
Query: 130 ELSPVT 135
P T
Sbjct: 329 FEDPGT 334
>gi|408397958|gb|EKJ77095.1| hypothetical protein FPSE_02739 [Fusarium pseudograminearum CS3096]
Length = 554
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 42 NSAKSADGSHLISNVTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL--- 96
N +S+ L++ VT EE+ + Y+ EDV EC KYG+I ++ V G
Sbjct: 449 NEVESSRVLQLLNMVTAEELLDNDDYEEICEDVREECS-KYGKILDVKVPRPTGGSRQSA 507
Query: 97 -VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDF 137
VG +++K+ ED KA+ L R F R V P +F
Sbjct: 508 GVGKIFVKYEHTEDTTKALQALAGRKFADRTVVTTYFPEENF 549
>gi|12847222|dbj|BAB27483.1| unnamed protein product [Mus musculus]
Length = 561
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 290 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITA 345
Query: 130 E-LSPVTDFR 138
+ TD++
Sbjct: 346 QAWDGTTDYQ 355
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 59 EEMQEHYDNFF---------EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREED 109
EEM+ ++ N + +D F E +KYGEI ++ + + G ++ + R ED
Sbjct: 227 EEMKANFTNIYVKNIDTETTDDEFRELFEKYGEITSASLARDQEGKVRGFGFVNYIRHED 286
Query: 110 AEKAVNDLNNRWFGGRPVYAELSPVTDFR-EACCRQYE 146
A KAV++LN+ F + +Y + R E RQYE
Sbjct: 287 ANKAVDELNDIDFKSQKLYVGRAQKKHEREEELRRQYE 324
>gi|344247059|gb|EGW03163.1| HIV Tat-specific factor 1-like [Cricetulus griseus]
Length = 528
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 30 EDLRVECA-KFGQIKKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITA 85
Query: 130 EL-SPVTDFR 138
E TD++
Sbjct: 86 EAWDGTTDYQ 95
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 41 QNSAKSADGSHLISNVTDE--EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVG 98
Q+S A L+SN+ D E +D ED +E +K+G + + V G
Sbjct: 431 QDSPAIATQCFLLSNMFDPATETNPSWDVEIEDDVIEECNKHGGVLHVYVDKQ---SPAG 487
Query: 99 NVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDF 137
NVY+K A AVN L+ RWF GR + A P+ ++
Sbjct: 488 NVYVKCPSIATAVLAVNALHGRWFAGRVIAAAYVPLVNY 526
>gi|255078502|ref|XP_002502831.1| predicted protein [Micromonas sp. RCC299]
gi|226518097|gb|ACO64089.1| predicted protein [Micromonas sp. RCC299]
Length = 244
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV EC K+G ++++ V + G V ++F+ DA+K V + RWFGGR + A
Sbjct: 159 EDVEAEC-GKFGAVDKVKVFTT---NPEGVVSVRFKDGGDAQKCVTAMKGRWFGGRQLEA 214
Query: 130 EL-SPVTDFREACCRQYEMGECTR 152
L T+F +A E E R
Sbjct: 215 SLWDGFTNFAKAGLESTEEDEAKR 238
>gi|255080772|ref|XP_002503959.1| predicted protein [Micromonas sp. RCC299]
gi|226519226|gb|ACO65217.1| predicted protein [Micromonas sp. RCC299]
Length = 332
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVG-NVYIKFRREEDAEKAVN 115
+D +E Y + EDV EC K G++ E+ + N D + N +++F +A+ AVN
Sbjct: 243 SDLVTEEEYKDVCEDVLQEC-SKSGQVIELRIPRNSIDANIKCNAFVRFATAAEAKAAVN 301
Query: 116 DLNNRWFGGRPVYAELSPVTDFRE 139
N R F GR V A L P DF E
Sbjct: 302 LFNGRKFDGRSVSAVLWPEEDFDE 325
>gi|149731824|ref|XP_001494792.1| PREDICTED: splicing factor 45-like [Equus caballus]
Length = 401
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 75 ECEDKYGEIEEMNVCDNLG--DHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ECE KYG++ + + + LG D ++++F R E A KAV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEILGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 384
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 52 LISNVTDE--EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREED 109
L+SN+ D E ++D +D +E +K+G ++ + V GNVY+K
Sbjct: 422 LLSNMFDPATETNPNWDLEIQDDVIEECNKHGGVQHVYVDKQ---SPSGNVYVKCPSIAT 478
Query: 110 AEKAVNDLNNRWFGGRPVYAELSPVTD----FREACCRQYEMGECTRSG 154
A AVN L+ RWF GR + A P+ + F EA + M + RSG
Sbjct: 479 AVLAVNALHGRWFAGRVIGAAYVPLINYYNLFPEA-AQSVTMLQPKRSG 526
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 56 VTDEEMQEHYDNFFEDVFVECEDK--------YGEIEEMNVC-DNLGDHLVGNVYIKFRR 106
+T E+ H+ F D+ E D+ +G + E +V D L G ++ FR
Sbjct: 108 MTKEDTTNHFHVFVGDLAAEINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRD 167
Query: 107 EEDAEKAVNDLNNRWFGGRPV 127
+ DAE+A+ +N W G RP+
Sbjct: 168 KTDAERAIATMNGEWLGTRPI 188
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 70 EDVFVECEDKYGEIEEMN-VCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVY 128
ED E +YG++ E V D + + G ++KF EE+A KA +++N + GR +Y
Sbjct: 49 EDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKARDEMNGKVLNGRVIY 108
Query: 129 AELS 132
+++
Sbjct: 109 VDIA 112
>gi|291408295|ref|XP_002720372.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 1 [Oryctolagus
cuniculus]
Length = 770
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIKKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 E-LSPVTDFR 138
E TD++
Sbjct: 345 EAWDGTTDYQ 354
>gi|224112381|ref|XP_002316170.1| predicted protein [Populus trichocarpa]
gi|222865210|gb|EEF02341.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K G ++ + VC+N + G V +KF+ +DA+ + +N RWFGGR V A
Sbjct: 411 DVREECA-KLGPVDSVKVCEN---NPHGVVLVKFKDRKDAQSCIELMNGRWFGGRQVDA 465
>gi|296481686|tpg|DAA23801.1| TPA: HIV-1 Tat specific factor 1-like [Bos taurus]
Length = 766
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + LN RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRSPEEADYCIQTLNGRWFGGRQITA 344
Query: 130 E 130
+
Sbjct: 345 Q 345
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 42.7 bits (99), Expect = 0.065, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 67 NFFEDV----FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
NF ED+ E KYG + V + G G ++ F R EDA+KAV+D+N +
Sbjct: 197 NFGEDMDDEKLKELFSKYGPALSIRVMTDDGGKSKGFGFVSFERHEDAQKAVDDMNGKEL 256
Query: 123 GGRPVY 128
GR VY
Sbjct: 257 NGRQVY 262
>gi|291408297|ref|XP_002720373.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 2 [Oryctolagus
cuniculus]
Length = 752
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIKKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
E TD++
Sbjct: 345 EAWDGTTDYQ 354
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 42.7 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 59 EEMQEHYDNFF---------EDVFVECEDKYGEIEEMNVC-DNLGDHLVGNVYIKFRREE 108
EEM+ ++ N + +D F E +KYGEI ++ DN G ++ + E
Sbjct: 235 EEMKANFTNIYVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGFGFVNYINHE 294
Query: 109 DAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCR-QYEMGECTRSG 154
DA KAV++LN+ F G+ +Y + RE R QYE +S
Sbjct: 295 DAYKAVDELNDSDFHGQKLYVGRAQKKHEREEELRKQYEAARQEKSA 341
>gi|164659450|ref|XP_001730849.1| hypothetical protein MGL_1848 [Malassezia globosa CBS 7966]
gi|159104747|gb|EDP43635.1| hypothetical protein MGL_1848 [Malassezia globosa CBS 7966]
Length = 549
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 51 HLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDA 110
H+ + E H D EDV ECE ++G +E + V + D G VY+ F +DA
Sbjct: 471 HMFDPAEETEPHWHVD-LREDVRAECE-RHGTVESVFVDTSSRD---GEVYVCFATTDDA 525
Query: 111 EKAVNDLNNRWFGGRPVYAEL 131
++A L R+FGG+ V A L
Sbjct: 526 QRARASLQGRFFGGKRVEASL 546
>gi|417404468|gb|JAA48986.1| Putative transcription elongation factor tat-sf1 [Desmodus
rotundus]
Length = 766
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIKKLLLFDR---HPDGVASVSFRNPEEADHCIQTLDGRWFGGRQITA 344
Query: 130 E-LSPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|302916595|ref|XP_003052108.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
gi|256733047|gb|EEU46395.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 43 SAKSADGS---HLISNVTDEEMQEH--YDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL- 96
+A +GS L++ VT EE+ ++ Y+ EDV EC K+G+I +M + G
Sbjct: 444 TANDVEGSRVLQLLNMVTAEELLDNDDYEEICEDVKEECS-KFGKIIDMKIPRPTGGSRQ 502
Query: 97 ---VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREAC 141
VG +++K+ ED KA+ L R F R V T F E C
Sbjct: 503 SAGVGKIFVKYETIEDTTKALKALAGRKFADRTVV-----TTYFPEVC 545
>gi|157818333|ref|NP_001101729.1| HIV-1 Tat specific factor 1 [Rattus norvegicus]
gi|149015808|gb|EDL75132.1| HIV TAT specific factor 1 (predicted) [Rattus norvegicus]
Length = 776
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFREPEEADNCIQTLDGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV EC +K+G + + V N GNVY+K A AVN L+ RWF G+ + A
Sbjct: 458 EDVIEEC-NKHGGVVHLYVDKNSAQ---GNVYVKCPTIASAIAAVNALHGRWFAGKMITA 513
Query: 130 ELSPVTDF 137
P+ +
Sbjct: 514 AYVPLPTY 521
>gi|440907708|gb|ELR57819.1| HIV Tat-specific factor 1 [Bos grunniens mutus]
Length = 766
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + LN RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRSPEEADYCIQTLNGRWFGGRQITA 344
Query: 130 E 130
+
Sbjct: 345 Q 345
>gi|348557907|ref|XP_003464760.1| PREDICTED: LOW QUALITY PROTEIN: HIV Tat-specific factor 1 homolog
[Cavia porcellus]
Length = 752
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVECA-KFGQIKKLLLFDR---HPDGVASVSFRDAEEADHCIQTLDGRWFGGRQITA 344
Query: 130 E-LSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRKRSSRRSRSR 186
+ TD++ E G+ F++ +R L+R + SR+R
Sbjct: 345 QAWDGTTDYQ--VEETSREREERLKGWEAFLNAPEANRSLQRSDSVSASEMAGPSRAR 400
>gi|395546036|ref|XP_003774900.1| PREDICTED: HIV Tat-specific factor 1 [Sarcophilus harrisii]
Length = 444
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ ECE K+G+++++ V D H G + ++ E+A+ + LN RWFGGR +
Sbjct: 289 EDLRTECE-KFGQVKKVLVFDR---HPDGVASVSYKEPEEADLCIQALNERWFGGRQLNV 344
Query: 130 EL-SPVTDFR 138
++ VTD++
Sbjct: 345 QVWDGVTDYQ 354
>gi|209882250|ref|XP_002142562.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558168|gb|EEA08213.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 261
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 69 FEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVY 128
ED E K+G + +NV ++ H G V +KF++ EDAE AV+ LNNR+F GR +
Sbjct: 185 LEDEIYEEVSKFGTV--INVT-SIPRHPHGIVCVKFKKSEDAEIAVSYLNNRFFDGRQIE 241
Query: 129 AEL-SPVTDFR 138
A L TDF+
Sbjct: 242 AFLYDGKTDFK 252
>gi|148710216|gb|EDL42162.1| HIV TAT specific factor 1, isoform CRA_b [Mus musculus]
Length = 793
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 326 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITA 381
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 382 QAWDGTTDYQ 391
>gi|330340363|ref|NP_001193343.1| HIV Tat-specific factor 1 [Bos taurus]
Length = 773
Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + LN RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITA 344
Query: 130 E-LSPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|342873171|gb|EGU75391.1| hypothetical protein FOXB_14096 [Fusarium oxysporum Fo5176]
Length = 661
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 42 NSAKSADGSHLISNVTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL--- 96
N +S+ L++ VT EE+ + Y+ EDV EC K+G+I ++ V G
Sbjct: 467 NEVESSRVLQLLNMVTAEELLDNDDYEEICEDVKEECS-KFGKIIDVKVPRPTGGSRQSA 525
Query: 97 -VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSP 133
VG +++K+ + ED KA+ L R F R V P
Sbjct: 526 GVGKIFVKYEKAEDTAKALQALAGRKFADRTVVTTYFP 563
>gi|157743332|ref|NP_001099058.1| poly(U)-binding-splicing factor PUF60 [Danio rerio]
gi|157423233|gb|AAI53302.1| LOC562370 protein [Danio rerio]
Length = 518
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 77 EDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 131
++K GE E+ V + ++++F + KA+ LNNRWFGGR V AE+
Sbjct: 459 QEKQGEEEDAEV--------IVKIFVEFSAASEMNKAIQALNNRWFGGRKVIAEV 505
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 42.4 bits (98), Expect = 0.081, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 59 EEMQEHYDNFF---------EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREED 109
EEM+ ++ N + +D F +KYG+I ++ + G ++ + R ED
Sbjct: 230 EEMKANFTNIYVKNIDPEATDDEFRALFEKYGDITSASLAHDQEGKSRGFGFVNYIRHED 289
Query: 110 AEKAVNDLNNRWFGGRPVYAELSPVTDFREACCR-QYE 146
A KAV +LNN F G+ +Y + RE R QYE
Sbjct: 290 ANKAVEELNNSDFKGQALYVGRAQKKHEREEELRKQYE 327
>gi|390341852|ref|XP_792919.3| PREDICTED: splicing factor U2AF 50 kDa subunit-like
[Strongylocentrotus purpuratus]
Length = 386
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 52 LISNVTDEEMQ--EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLV---GNVYIKFRR 106
L++ VT EE++ E YD+ EDV EC+ KYG++ + + + V G +Y++F
Sbjct: 292 LMNMVTPEELKDDEEYDDIVEDVKEECQ-KYGQVRSLEIPRPIPGLDVPGCGKIYVEFMT 350
Query: 107 EEDAEKAVNDLNNRWFGGRPV 127
DA+ A L R F R V
Sbjct: 351 VMDAQAAQRALAGRKFANRTV 371
>gi|387193898|gb|AFJ68729.1| rna binding motif protein 39b, partial [Nannochloropsis gaditana
CCMP526]
Length = 456
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 52 LISNVTDEEMQEHYDNFFEDVFVECED---KYGEIEEMNVCDNLGDHLVGNVYIKFRR-- 106
L+ N+ D +E D + D+ + ED K+GE+ + V D G G+VY+ F+
Sbjct: 359 LLKNMFDP-AEEKDDGWELDIQDDVEDEGRKFGEVRHVRV-DVKGPG--GHVYMLFKEGE 414
Query: 107 EEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREA 140
EE A+K+ LN RWF GR + E P+ + E+
Sbjct: 415 EEGAQKSAQALNGRWFAGRMIMVEYLPLARYLES 448
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 42.4 bits (98), Expect = 0.087, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 55 NVTDEEMQEHYDNFFED-VFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 113
N+ + E + ED V E E+KYG + + V N G++Y+KF + + E A
Sbjct: 505 NMASRQQGEDWIKELEDEVRQEAEEKYGHVVHIAVDPNSN----GDIYLKFDKVQGGENA 560
Query: 114 VNDLNNRWFGGRPVYAELSPVTD 136
+ LN R+F GR + A +PV D
Sbjct: 561 IKGLNGRYFDGRMITA--APVVD 581
>gi|308807104|ref|XP_003080863.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116059324|emb|CAL55031.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 387
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 55 NVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV 114
N +E E + + EDV ECE K+GEI V + G VY+KF + +A
Sbjct: 302 NAAEETDPEWWLDIAEDVKGECE-KFGEITHTFVDKDS----QGFVYLKFADVASSTRAQ 356
Query: 115 NDLNNRWFGGRPVYAE 130
L+ RWF GR + AE
Sbjct: 357 QALHTRWFAGRKIAAE 372
>gi|412988900|emb|CCO15491.1| predicted protein [Bathycoccus prasinos]
Length = 457
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 62 QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRW 121
Q D EDV EC K G++E V N G V ++F+ E A+ + ++NRW
Sbjct: 354 QTFSDELKEDVAEECRVKCGKVENAYVNAN------GVVTVRFKEPEGADACLQLMHNRW 407
Query: 122 FGGRPVYAEL 131
FGG+ + AE+
Sbjct: 408 FGGKQLKAEM 417
>gi|307212516|gb|EFN88247.1| Splicing factor 45 [Harpegnathos saltator]
Length = 383
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 66 DNFFEDVFVECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 123
D+ +V EC KYG++ + + ++++F+R E A KAV DLN R+FG
Sbjct: 303 DDLEPEVKDECNTKYGDVARVIIHEVMEAAAEEAVRIFVEFKRIESAIKAVVDLNGRFFG 362
Query: 124 GRPVYA 129
GR V A
Sbjct: 363 GRQVKA 368
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 52 LISNVTDE--EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREED 109
L+SN+ D E ++D +D +E +K+G + + V D L GNVY+K
Sbjct: 456 LLSNMFDPSTETNPNWDVEIQDDVIEECNKHGGVLHVYV-DKLSPS--GNVYVKCPNVAT 512
Query: 110 AEKAVNDLNNRWFGGRPVYAELSPVTDF 137
A AVN L+ RWF GR + A P+ ++
Sbjct: 513 AVLAVNALHGRWFAGRVIGAAYVPLVNY 540
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 59 EEMQEHYDNFFEDVFVECED--------KYGEIEEMNVCDNLGDHLV-GNVYIKFRREED 109
E+ Q H+ F D+ E D +G + E V ++ G ++ FR+ ED
Sbjct: 101 EDTQHHHHVFVGDLSPEVNDDVLAKAFGAFGSMSEARVMWDMNSGKSRGYGFLSFRKRED 160
Query: 110 AEKAVNDLNNRWFGGRPV 127
AE+A+N +N W G R +
Sbjct: 161 AEQAINTMNGEWLGSRAI 178
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 42.4 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 59 EEMQEHYDNFF---------EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREED 109
+EM+ H+ N + E+ F ++G I + + + G ++ F ED
Sbjct: 248 DEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEGNSKGFGFVNFENHED 307
Query: 110 AEKAVNDLNNRWFGGRPVYAELSPVTDFREACCR-QYEMGECTRSG 154
A++AV +L+N+ G+PV+ + RE R QYE + ++G
Sbjct: 308 AQRAVEELDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEKAG 353
>gi|312382254|gb|EFR27775.1| hypothetical protein AND_05136 [Anopheles darlingi]
Length = 178
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 66 DNFFEDVFVECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 123
D +V EC KYG++ + + N+ ++++F+R E A KAV DLN R+FG
Sbjct: 98 DELEPEVKDECNTKYGDVVTVVIHEVPNVVPEESVRIFVEFKRIESAIKAVVDLNGRFFG 157
Query: 124 GRPVYA 129
GR V A
Sbjct: 158 GRQVRA 163
>gi|348518982|ref|XP_003447010.1| PREDICTED: HIV Tat-specific factor 1 homolog [Oreochromis
niloticus]
Length = 452
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ ECE K+GE++++ + D H G + F+ E A+ + N RWFGGR + A
Sbjct: 303 EDLRSECE-KFGEVKKVILFDR---HPDGVASVAFKEPEQADACILSFNGRWFGGRQLSA 358
Query: 130 EL 131
+L
Sbjct: 359 QL 360
>gi|23956212|ref|NP_082518.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|321267528|ref|NP_083647.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|81913100|sp|Q8BGC0.1|HTSF1_MOUSE RecName: Full=HIV Tat-specific factor 1 homolog
gi|22902415|gb|AAH37711.1| HIV TAT specific factor 1 [Mus musculus]
gi|26340228|dbj|BAC33777.1| unnamed protein product [Mus musculus]
gi|148710215|gb|EDL42161.1| HIV TAT specific factor 1, isoform CRA_a [Mus musculus]
Length = 757
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 290 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITA 345
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 346 QAWDGTTDYQ 355
>gi|345807273|ref|XP_538183.3| PREDICTED: HIV Tat-specific factor 1 homolog [Canis lupus
familiaris]
Length = 768
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 E-LSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 170
+ TD++ E G+ F++ +R LRR
Sbjct: 345 QAWDGTTDYQ--VEETTREREERLRGWEAFLNAPEANRSLRR 384
>gi|195124159|ref|XP_002006561.1| GI21125 [Drosophila mojavensis]
gi|193911629|gb|EDW10496.1| GI21125 [Drosophila mojavensis]
Length = 427
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 52 LISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGN---VYIKFRREE 108
L S +TD++ YD+ D+ EC KYG+++ + + D + G V+++F +
Sbjct: 337 LPSELTDDD---EYDDIRTDIKQECA-KYGKVKSLKIPRPGDDSIQGGCGKVFVRFESID 392
Query: 109 DAEKAVNDLNNRWFGGRPV 127
D +KA+N L+ R F GR V
Sbjct: 393 DCKKALNALSGRKFSGRIV 411
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
++V E E+KYG + +++ N G++Y+KF + E A+ LN R+F GR + A
Sbjct: 513 DEVRQEAEEKYGHVVHISLDPNS----QGDIYLKFDKVSGGENAIKGLNGRYFDGRMITA 568
Query: 130 ELSPVTD 136
+PV D
Sbjct: 569 --APVVD 573
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIK----FRREEDAEKAVNDLN 118
E D+ E + KYG +E + + G+V IK F+ + A+KA+ LN
Sbjct: 610 EDVDDELEGEITDEATKYGIVERVVIYQERQSEKPGDVIIKIFILFQSADQAQKALTSLN 669
Query: 119 NRWFGGRPVYA 129
RWFGGR + A
Sbjct: 670 GRWFGGRQIKA 680
>gi|116310691|emb|CAH67490.1| H0306B06.5 [Oryza sativa Indica Group]
gi|116310709|emb|CAH67506.1| OSIGBa0092E01.1 [Oryza sativa Indica Group]
gi|125548880|gb|EAY94702.1| hypothetical protein OsI_16479 [Oryza sativa Indica Group]
Length = 476
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K G ++ + VC+N H G + +KF+ +D K + +N RWFGG + A
Sbjct: 389 DVREECM-KLGPVDNVKVCEN---HPEGVILVKFKDRKDGIKCIEKMNGRWFGGNQIQA 443
>gi|115459200|ref|NP_001053200.1| Os04g0496400 [Oryza sativa Japonica Group]
gi|38345380|emb|CAE03112.2| OSJNBa0067K08.9 [Oryza sativa Japonica Group]
gi|113564771|dbj|BAF15114.1| Os04g0496400 [Oryza sativa Japonica Group]
gi|125590877|gb|EAZ31227.1| hypothetical protein OsJ_15326 [Oryza sativa Japonica Group]
Length = 476
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 71 DVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
DV EC K G ++ + VC+N H G + +KF+ +D K + +N RWFGG + A
Sbjct: 389 DVREECM-KLGPVDNVKVCEN---HPEGVILVKFKDRKDGIKCIEKMNGRWFGGNQIQA 443
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 70 EDVFVECEDKYGEIEEMN-VCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVY 128
ED E +YG++ E V D + + G ++KF EE A KA ++N + GR +Y
Sbjct: 50 EDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEMNGKVLNGRVIY 109
Query: 129 AELS 132
+++
Sbjct: 110 VDIA 113
>gi|351695595|gb|EHA98513.1| HIV Tat-specific factor 1-like protein [Heterocephalus glaber]
Length = 728
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+D+ VEC K+G+I+++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 286 DDLRVECS-KFGQIKKLLLFDR---HPDGVASVSFRDPEEADHCIQTLDGRWFGGRQITA 341
Query: 130 E-LSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 170
+ TD++ E G+ F+ +R LRR
Sbjct: 342 QPWDGTTDYQ--VEETAREREERLKGWEAFLSTPEANRGLRR 381
>gi|194884971|ref|XP_001976363.1| GG20057 [Drosophila erecta]
gi|190659550|gb|EDV56763.1| GG20057 [Drosophila erecta]
Length = 440
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 52 LISNVTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHL---VGNVYIKFRR 106
L++ V EE+ E +++ D+ EC KYGE+ + + +G G V+++F
Sbjct: 345 LLNMVLPEELLDNEEFEDIRTDIEQECA-KYGEVRSIKIPRPIGQAPKRGCGKVFVQFES 403
Query: 107 EEDAEKAVNDLNNRWFGGRPV 127
ED+++A+ L+ R F GR V
Sbjct: 404 VEDSQRALKALSGRKFSGRIV 424
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 422 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 477
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 478 AYVPVVNY 485
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 422 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 477
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 478 AYVPVVNY 485
>gi|24582417|ref|NP_723245.1| CG11266, isoform C [Drosophila melanogaster]
gi|24582419|ref|NP_723246.1| CG11266, isoform D [Drosophila melanogaster]
gi|24582421|ref|NP_723247.1| CG11266, isoform F [Drosophila melanogaster]
gi|24582423|ref|NP_723248.1| CG11266, isoform G [Drosophila melanogaster]
gi|45550943|ref|NP_723244.2| CG11266, isoform E [Drosophila melanogaster]
gi|22945836|gb|AAN10616.1| CG11266, isoform C [Drosophila melanogaster]
gi|22945837|gb|AAN10617.1| CG11266, isoform D [Drosophila melanogaster]
gi|22945838|gb|AAN10618.1| CG11266, isoform F [Drosophila melanogaster]
gi|22945839|gb|AAN10619.1| CG11266, isoform G [Drosophila melanogaster]
gi|45445036|gb|AAN10615.2| CG11266, isoform E [Drosophila melanogaster]
Length = 287
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC K+G + ++V D + G VY+K A AVN L+ RWF GR + A
Sbjct: 201 DDVLEECA-KHGGVLHIHV-DTISH--TGTVYVKCPSTTTAVLAVNALHGRWFAGRVITA 256
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 257 AYVPVINY 264
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 421 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 476
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 477 AYVPVVNY 484
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 57 TDEEMQEHYDNFFEDVFVECEDK--------YGEIEEMNVC-DNLGDHLVGNVYIKFRRE 107
T + +H+ F D+ + E + +GEI + V D G ++ F R+
Sbjct: 40 TKPDTNKHFHIFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRK 99
Query: 108 EDAEKAVNDLNNRWFGGR 125
+DAE A+N +N +W GGR
Sbjct: 100 QDAETAINAMNGQWLGGR 117
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 446 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 501
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 502 AYVPVVNY 509
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 284 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 339
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 340 AYVPVVNY 347
>gi|431891353|gb|ELK02229.1| HIV Tat-specific factor 1 like protein [Pteropus alecto]
Length = 786
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 288 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 343
Query: 130 EL-SPVTDFR 138
++ TD++
Sbjct: 344 QVWDGTTDYQ 353
>gi|84996941|ref|XP_953192.1| RNA binding protein [Theileria annulata strain Ankara]
gi|65304188|emb|CAI76567.1| RNA binding protein, putative [Theileria annulata]
Length = 479
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 34 LNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLG 93
+ + + P++S +I N+ D ++ + +N +V EC +KYG + + +
Sbjct: 373 IQVTMAPESSVAGTSNVIVIYNMVDPKLVD--ENLQNEVKDEC-NKYGTVTSVYL----- 424
Query: 94 DHLVGN-----VYIKFRREEDAEKAVNDLNNRWFGGRPV 127
H N V++ F +DA+ AV LN RWF GR +
Sbjct: 425 -HFSPNNDSLSVFVVFNTPQDADSAVRALNTRWFNGRQI 462
>gi|157115517|ref|XP_001658243.1| hypothetical protein AaeL_AAEL007239 [Aedes aegypti]
gi|108876860|gb|EAT41085.1| AAEL007239-PA [Aedes aegypti]
Length = 419
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 66 DNFFEDVFVECEDKYGEIEEMNV--CDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 123
D +V EC KYG++ + + + ++++F+R E A KAV DLN R+FG
Sbjct: 339 DELEPEVKDECNTKYGDVITVVIHEIPKVVPEETVRIFVEFKRMESAIKAVVDLNGRFFG 398
Query: 124 GRPVYA 129
GR V A
Sbjct: 399 GRQVRA 404
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 444 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 499
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 500 AYVPVVNY 507
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 443 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 498
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 499 AYVPVVNY 506
>gi|226500638|ref|NP_001149001.1| splicing factor 45 [Zea mays]
gi|195623866|gb|ACG33763.1| splicing factor 45 [Zea mays]
Length = 384
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 66 DNFFEDVFVECEDKYGEIE-----EMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNR 120
D ++V EC +YG + E+ D D V ++I+F R E+A KA+ DL R
Sbjct: 293 DELEDEVASECA-RYGTVSRVLIFEITQADFPSDEAV-RIFIQFERAEEATKAMVDLQGR 350
Query: 121 WFGGRPVYA 129
+FGGR V A
Sbjct: 351 FFGGRVVQA 359
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 442 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 497
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 498 AYVPVVNY 505
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC+ K+G +E++ + + D GNV+I+F + A A LN R+F G+P+ A
Sbjct: 565 DDVRDECK-KFGSVEKVWIDERNVD---GNVWIRFAHPDQARAAFGALNGRYFAGKPISA 620
Query: 130 EL 131
E
Sbjct: 621 EF 622
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC+ K+G +E++ + + D GNV+I+F + A A LN R+F G+P+ A
Sbjct: 565 DDVRDECK-KFGSVEKVWIDERNVD---GNVWIRFAHPDQARAAFGALNGRYFAGKPISA 620
Query: 130 EL 131
E
Sbjct: 621 EF 622
>gi|426257498|ref|XP_004022363.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ovis aries]
Length = 774
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + F+ E+A+ + LN RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFKDPEEADYCIQTLNGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 434 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 489
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 490 AYVPVVNY 497
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 52 LISNVTD--EEMQEHYDN-FFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREE 108
L+ N+ D EE + +D DV EC KYG + +V N G VY+KF E
Sbjct: 408 LLKNMFDPKEETEPDWDQEIATDVTEEC-SKYGPVSHTHVDKNSK----GFVYLKFVTVE 462
Query: 109 DAEKAVNDLNNRWFGGRPVYAEL 131
+ A L+ RWF GR V AE
Sbjct: 463 GSAAAQKALHGRWFAGRQVVAEF 485
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV EC +K+G + + V N GNVY+K A AVN L+ RWF G+ + A
Sbjct: 460 EDVIEEC-NKHGGVVHIYVDKN---SPQGNVYVKCPTIASAIAAVNALHGRWFAGKMITA 515
Query: 130 ELSPVTDF 137
P+ +
Sbjct: 516 AYVPLPTY 523
>gi|145349966|ref|XP_001419396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579627|gb|ABO97689.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 516
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 22/109 (20%)
Query: 23 NKPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGE 82
P + ILL NL+ N +E E + + EDV ECE K+GE
Sbjct: 416 GSPIPTPCILLKNLF-----------------NAAEETDPEWWLDIAEDVKGECE-KFGE 457
Query: 83 IEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 131
I V + G VY+KF + +A L+ RWF GR + AE
Sbjct: 458 ITHAFVDKDS----QGFVYLKFVDTASSTRAQQALHARWFAGRKIAAEF 502
>gi|410989518|ref|XP_004001008.1| PREDICTED: HIV Tat-specific factor 1 homolog [Felis catus]
Length = 780
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 303 EDLRVECA-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 358
Query: 130 E-LSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 170
+ TD++ E G+ F++ +R LRR
Sbjct: 359 QAWDGTTDYQ--VEETTREREERLRGWEAFLNAPEANRGLRR 398
>gi|301088364|ref|XP_002996880.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110854|gb|EEY68906.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 96
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVC---DNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
E Y + EDV EC+ ++G + M + D +G +Y++F +EEDA A+ LN
Sbjct: 14 EEYADLAEDVEEECK-RFGGVTGMEIPRPKDGEEVPGLGCIYVRFGKEEDAVSALKALNG 72
Query: 120 RWFGGRPVYAELSPVTDF 137
R FGG V PV F
Sbjct: 73 RKFGGNIVKVTYFPVDKF 90
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
EDV EC +K+G + V N GNVY+K A AVN L+ RWF G+ + A
Sbjct: 430 EDVMEEC-NKHGGAIHIYVDKNSPQ---GNVYVKCSTITSAIAAVNALHGRWFAGKMITA 485
Query: 130 ELSPVTDF 137
PV +
Sbjct: 486 AYVPVPTY 493
>gi|194387946|dbj|BAG61386.1| unnamed protein product [Homo sapiens]
Length = 721
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 420 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIGTAVAAVNSLHGRWFAGRVITA 475
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 476 AYVPVVNY 483
>gi|195489053|ref|XP_002092574.1| GE11595 [Drosophila yakuba]
gi|194178675|gb|EDW92286.1| GE11595 [Drosophila yakuba]
Length = 437
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 52 LISNVTDEEM--QEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLV---GNVYIKFRR 106
L++ V EE+ E +++ D+ EC KYG++ + + +G G V+++F
Sbjct: 342 LLNMVLPEELLDNEEFEDIRSDIKQECA-KYGDVRSIKIPRPVGQFPKRGCGKVFVQFES 400
Query: 107 EEDAEKAVNDLNNRWFGGRPV 127
ED++KA+ L+ R F GR V
Sbjct: 401 VEDSQKALKALSGRKFSGRIV 421
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Query: 24 KPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEI 83
+P S ++L N+Y SAD E+ +E +D EDV EC KYG +
Sbjct: 544 QPLNSSNLVLSNMYT-------SADY---------EDNREFFDEIEEDVKEEC-GKYGTV 586
Query: 84 EEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTD 136
++ V D G VY+KF+ +DA+ A L R+F G + ++S ++D
Sbjct: 587 IQVFVNKRNPD---GKVYVKFKNNDDAQAANKSLQGRYFAGNTI--QVSYISD 634
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC +K+G + + V D GNVY+K A AVN L+ RWF GR + A
Sbjct: 420 DDVIEEC-NKHGGVLHVYV-DQASPQ--GNVYVKCPSIGTAVAAVNSLHGRWFAGRVITA 475
Query: 130 ELSPVTDF 137
PV ++
Sbjct: 476 AYVPVVNY 483
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
+DV EC+ K+G +E++ + + D GNV+I+F + A A LN R+F G+P+ A
Sbjct: 574 DDVRDECK-KFGSVEKVWIDERNVD---GNVWIRFAHPDQARAAFGALNGRYFAGKPISA 629
Query: 130 EL 131
E
Sbjct: 630 EF 631
>gi|1667611|gb|AAB18823.1| Tat-SF1 [Homo sapiens]
Length = 754
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|301769097|ref|XP_002919964.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ailuropoda
melanoleuca]
Length = 767
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 E-LSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRR 170
+ TD++ E G+ F++ +R LRR
Sbjct: 345 QAWDGATDYQ--VEETTREREERLRGWEAFLNAPEANRGLRR 384
>gi|395506976|ref|XP_003757804.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 594
Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 67 NFFEDVFVECEDK----YGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWF 122
NF EDV +C ++ +G+ + V + H G ++ F + E+A+KAVN +N +
Sbjct: 182 NFEEDVDDQCLEELFSEFGKTLSVKVMVDENGHSRGFGFVNFEKHEEAQKAVNSMNGKAL 241
Query: 123 GGRPVY 128
GGR +Y
Sbjct: 242 GGRVLY 247
>gi|426397566|ref|XP_004064985.1| PREDICTED: HIV Tat-specific factor 1 [Gorilla gorilla gorilla]
Length = 755
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT specific factor 1 [synthetic construct]
gi|60653905|gb|AAX29645.1| HIV TAT specific factor 1 [synthetic construct]
gi|60653907|gb|AAX29646.1| HIV TAT specific factor 1 [synthetic construct]
Length = 756
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|21361437|ref|NP_055315.2| HIV Tat-specific factor 1 [Homo sapiens]
gi|253970456|ref|NP_001156752.1| HIV Tat-specific factor 1 [Homo sapiens]
gi|74754346|sp|O43719.1|HTSF1_HUMAN RecName: Full=HIV Tat-specific factor 1; Short=Tat-SF1
gi|14602772|gb|AAH09896.1| HIV-1 Tat specific factor 1 [Homo sapiens]
gi|30582611|gb|AAP35532.1| HIV TAT specific factor 1 [Homo sapiens]
gi|61362248|gb|AAX42186.1| HIV TAT specific factor 1 [synthetic construct]
gi|119608874|gb|EAW88468.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|119608875|gb|EAW88469.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|157929022|gb|ABW03796.1| HIV-1 Tat specific factor 1 [synthetic construct]
Length = 755
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|449547880|gb|EMD38847.1| hypothetical protein CERSUDRAFT_81656 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 25/104 (24%)
Query: 52 LISNVTDEEMQ--EHYDNFFEDVFVECEDKYGEIEEMNV--------------------C 89
+++ V EE+Q + Y + +ED+ EC +YG +E++ +
Sbjct: 346 MLNMVVPEELQDDQEYADIYEDITEEC-GRYGAVEDLRIPRPVKRDKAKWGENGMDSARA 404
Query: 90 DNLGDHL--VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAEL 131
L D VG VY+K+ + A A+ L R F GR + A L
Sbjct: 405 AQLADEAAGVGRVYVKYAQPNSAANALKALAGRSFAGRSIIATL 448
>gi|397482309|ref|XP_003812372.1| PREDICTED: HIV Tat-specific factor 1 [Pan paniscus]
gi|410211494|gb|JAA02966.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410261782|gb|JAA18857.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410304122|gb|JAA30661.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410333195|gb|JAA35544.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
Length = 755
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|62088186|dbj|BAD92540.1| HIV TAT specific factor 1 variant [Homo sapiens]
Length = 758
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 292 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 347
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 348 QAWDGTTDYQ 357
>gi|452823570|gb|EME30579.1| RNA-binding protein [Galdieria sulphuraria]
Length = 400
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 64 HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFG 123
+Y++ +D+ EC K GEIE++ V + + G V ++FR AE + + RW+G
Sbjct: 293 YYEDIRKDMLEEC-SKLGEIEKLTVFER---NPEGVVAVRFRSPAAAESCIELMTGRWYG 348
Query: 124 GRPVYAEL-SPVTDFR 138
GR + AE TD+R
Sbjct: 349 GRQLEAEFYDGKTDYR 364
>gi|345306681|ref|XP_001514214.2| PREDICTED: HIV Tat-specific factor 1 homolog [Ornithorhynchus
anatinus]
Length = 439
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ ECE K+G+++++ + D H G + ++ ++A+ + LN RWFGGR +
Sbjct: 277 EDLRTECE-KFGQVKKVLLFDR---HPDGVASVSYKEADEADLCIQALNGRWFGGRQLSV 332
Query: 130 E-LSPVTDFR 138
E VTD++
Sbjct: 333 EAWDGVTDYQ 342
>gi|332246954|ref|XP_003272619.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Nomascus
leucogenys]
Length = 754
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 64 HYDNFFEDV----FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 119
+ NF ED+ E KYG + V + G ++ F R EDA+KAV+D+N
Sbjct: 181 YIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQKAVDDMNG 240
Query: 120 RWFGGRPVY 128
+ GR VY
Sbjct: 241 KELNGRQVY 249
>gi|160332383|sp|Q6IQE0.2|PU60B_DANRE RecName: Full=Poly(U)-binding-splicing factor PUF60-B
Length = 516
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 66 DNFFEDVFVECEDKYGEIEEMNV-CDNLGDH----LVGNVYIKFRREEDAEKAVNDLNNR 120
D+ +V EC KYG + + + + G+ ++ ++++F + KA+ LNNR
Sbjct: 434 DDLEGEVMEEC-GKYGAVNRVIIYQERQGEEDDAEIIVKIFVEFSDAGEMNKAIQALNNR 492
Query: 121 WFGGRPVYAEL 131
WF GR V AEL
Sbjct: 493 WFAGRKVVAEL 503
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 24 KPTFSQTILLLNLYINPQNSAKSADGSHLISNVTDEEMQEHYDNFFEDVFVECEDKYGEI 83
+P S ++L N+Y SA AD E +D EDV EC KYG +
Sbjct: 543 QPLNSSNLVLSNMYT----SADYADN------------HEFFDEIEEDVKEEC-GKYGTV 585
Query: 84 EEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTD 136
++ V D G VY+KF+ +DA+ A L R+F G + ++S ++D
Sbjct: 586 VQVFVNRRNPD---GKVYVKFKNNDDAQSANKSLQGRYFAGNTI--QVSYISD 633
>gi|410915234|ref|XP_003971092.1| PREDICTED: HIV Tat-specific factor 1 homolog [Takifugu rubripes]
Length = 439
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VECE K+G ++++ + D H G + F+ ++A+ + N RWFGGR + A
Sbjct: 299 EDLRVECE-KFGAVKKVILFDR---HPDGVASVAFKEPDEADACIQSFNGRWFGGRQLSA 354
Query: 130 EL 131
+
Sbjct: 355 QF 356
>gi|355757742|gb|EHH61267.1| hypothetical protein EGM_19235 [Macaca fascicularis]
Length = 754
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 70 EDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYA 129
ED+ VEC K+G+I ++ + D H G + FR E+A+ + L+ RWFGGR + A
Sbjct: 289 EDLRVEC-SKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 130 EL-SPVTDFR 138
+ TD++
Sbjct: 345 QAWDGTTDYQ 354
>gi|318087106|gb|ADV40145.1| putative apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Latrodectus hesperus]
Length = 332
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 61 MQEHYDNFFEDV----FVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVND 116
M + NF +D+ E +KYG+I V + G ++ F E+AEKAVND
Sbjct: 174 MNVYIKNFGDDLDDEKLREMFEKYGKITSAKVMADETGKPKGFGFVSFEDPENAEKAVND 233
Query: 117 LNNRWFGGRPVYA 129
LNN+ G+ +Y
Sbjct: 234 LNNKELNGKVLYV 246
>gi|428182175|gb|EKX51036.1| hypothetical protein GUITHDRAFT_134574 [Guillardia theta CCMP2712]
Length = 458
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 63 EHYDNFFEDVFVECEDKYGEIEEMNVCDNL--GDHLVGNVYIKFRREEDAEKAVNDLNNR 120
E D E E K+G++ ++ + + G LV V+++F +E A KAV L+ R
Sbjct: 376 EDVDPLLEQEIAEECSKFGKVNKVLIVTMVEQGSRLV-KVFVEFGDQEAATKAVARLDKR 434
Query: 121 WFGGRPVYA 129
WFGG+ V A
Sbjct: 435 WFGGKIVNA 443
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,961,146,581
Number of Sequences: 23463169
Number of extensions: 122002900
Number of successful extensions: 346195
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 895
Number of HSP's that attempted gapping in prelim test: 341205
Number of HSP's gapped (non-prelim): 4279
length of query: 189
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 55
effective length of database: 9,215,130,721
effective search space: 506832189655
effective search space used: 506832189655
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)