BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1225
(256 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus GN=PBRM1 PE=1 SV=1
Length = 1633
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 33/226 (14%)
Query: 9 EGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENA 68
+G +SEPF +LP+K+ PDYY+ IK P SL I LK+ Y TL++L +LNLMFENA
Sbjct: 398 QGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENA 457
Query: 69 KKFNPADSRLYRDAVKLQKLMQRKVQENPR--------SLLT--IGKTLKSGHYSTLNEL 118
K++N +S +Y+ +K+Q++MQ K +E R S+++ T S S N
Sbjct: 458 KRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNMR 517
Query: 119 TGELNLMF---------------------ENAKKFNPADSRLYRDAVKLQKLMQ--RKVQ 155
+ +++ + +KK P ++ + + L+ + R +
Sbjct: 518 KQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDK 577
Query: 156 EFSLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
+ ++ LMF NA+ +N ++Y DA L+K+++ K +E+
Sbjct: 578 YVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKEL 623
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 37/227 (16%)
Query: 10 GGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
G L + F+ P+K+ PDYY+II P L I +++ Y + ++ LMF NA+
Sbjct: 537 GRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNAR 596
Query: 70 KFNPADSRLYRDAVKLQKLMQRKVQE-----------NPRSLLTIGKTLKSGHYSTLNEL 118
+N S++Y DA L+K+++ K +E +P+ L+ + + +
Sbjct: 597 HYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDDVASPKLKLSRKSGISPKKSKYMTPM 656
Query: 119 TGELNLMFENAKKFN--------------PADSRL------YRDAVKLQK----LMQRKV 154
+LN ++E K + P+ S L + V ++K +M K
Sbjct: 657 QQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKY 716
Query: 155 QEFSLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
Q+ ++ + + +MF NA +N + +Y+DA+ L K++ +E+
Sbjct: 717 QD--IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREI 761
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 9 EGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENA 68
+G L E F++ P +R PDYY ++ P L+ I + LK Y +N LT + L+F NA
Sbjct: 65 QGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNA 124
Query: 69 KKFNPADSRLYRDAVKLQKLMQRKVQE-NPRSLLTIGKTLKSGHYSTLNELTGELNLMFE 127
K + DS Y+ A KL +L R E + + GH S G L + E
Sbjct: 125 KAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDSQELSSPGYLKEILE 184
Query: 128 N-----AKKFNPAD---SRLY----------------RDAVKLQKLMQRKVQEF---SLN 160
A NP+ S L+ ++ + L+ + QR +Q S++
Sbjct: 185 QLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQR-IQNGTYKSIH 243
Query: 161 ELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
+ ++ L+ +NAK +N ++++DA ++K+ K E+
Sbjct: 244 AMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEI 284
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 10 GGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
G +SE F KLP+K PDYY IIK P L TI + +++G Y +++ + +++L+ +NAK
Sbjct: 198 GRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAK 257
Query: 70 KFNPADSRLYRDAVKLQKLMQRKVQENPRSLLTIGK-TLKSGHYSTLNELTG 120
+N S++++DA ++K+ K E S L L++ T ++LTG
Sbjct: 258 TYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLRTPSNLTASKLTG 309
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P L TI + +++G Y +++ + +++L+ +NAK +N S++++DA ++K+ K E
Sbjct: 224 PIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAE 283
Query: 157 FSLNELT 163
+EL
Sbjct: 284 IEHSELA 290
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 15/128 (11%)
Query: 43 GKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQENPRSLLT 102
G + K Y T + +LN ++E K + D R R + +L R E P +T
Sbjct: 644 GISPKKSKYMT--PMQQKLNEVYEAVKNY--TDKRGRRLSAIFLRLPSR--SELPDYYIT 697
Query: 103 IGKTLK---------SGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRK 153
I K + + Y ++ + + +MF NA +N +S +Y+DA+ L K++
Sbjct: 698 IKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET 757
Query: 154 VQEFSLNE 161
+E +E
Sbjct: 758 RREIEGDE 765
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 144 VKLQKLMQR-KVQEFS-LNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
+ L K+ Q+ K++E+ +N LT + L+F NAK + D Y+ A KL +L R E
Sbjct: 93 IDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEF 152
Query: 202 M 202
+
Sbjct: 153 V 153
>sp|Q8BSQ9|PB1_MOUSE Protein polybromo-1 OS=Mus musculus GN=Pbrm1 PE=1 SV=4
Length = 1634
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 33/226 (14%)
Query: 9 EGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENA 68
+G ++EPF LP+K+ PDYY+ IK P SL I LK+ Y TL+ L +LNLMFENA
Sbjct: 400 QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA 459
Query: 69 KKFNPADSRLYRDAVKLQKLMQRKVQENPR--------SLLT--IGKTLKSGHYSTLNEL 118
K++N +S +Y+ +KLQ++MQ K +E R S+++ T + S N
Sbjct: 460 KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIR 519
Query: 119 TGELNLMFENA-KKFNPADSRL-------------YRDAVKLQ-KLMQRKVQEFSL--NE 161
+ ++F + P R Y D K+ + M K+ E ++ ++
Sbjct: 520 KQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
Query: 162 LTGE------LSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
GE + LMF NA+ +N ++Y DA L+KL++ K +E+
Sbjct: 580 YAGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKEL 625
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 37/220 (16%)
Query: 10 GGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
G L + F+ P+K+ PDYY+II P L I +++ Y+ + ++ LMF NA+
Sbjct: 539 GRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMMEDMKLMFRNAR 598
Query: 70 KFNPADSRLYRDAVKLQKLMQRKVQE-----------NPRSLLTIGKTLKSGHYSTLNEL 118
+N S++Y DA L+KL++ K +E +P+ L+ + + +
Sbjct: 599 HYNEEGSQVYNDAHILEKLLKDKRKELGPLPDDDDMASPKLKLSRKSGVSPKKSKYMTPM 658
Query: 119 TGELNLMFENAKKFN--------------PADSRLYRDAVKLQK----------LMQRKV 154
+LN ++E K + P+ S L + ++K +M K
Sbjct: 659 QQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKY 718
Query: 155 QEFSLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLM 194
Q+ ++ + + +MF NA +N + +Y+DA+ L K++
Sbjct: 719 QD--IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVL 756
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%)
Query: 10 GGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
G +SE F KLP+K PDYY IIK P L TI + +++G Y +++ + +++L+ +NAK
Sbjct: 201 GRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAK 260
Query: 70 KFNPADSRLYRDAVKLQKLMQRKVQE 95
+N S++++DA ++K+ K E
Sbjct: 261 TYNEPGSQVFKDANSIKKIFYMKKAE 286
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 33/225 (14%)
Query: 9 EGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENA 68
+G L E F++ P +R PDYY ++ P L+ I + LK Y +N LT + L+F NA
Sbjct: 64 QGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNA 123
Query: 69 KKFNPADSRLYRDAVKLQKLMQRKVQE---------------------------NPRSLL 101
K + DS Y+ A KL L R E +P L
Sbjct: 124 KAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTLADGSSPGYLK 183
Query: 102 TIGKTLKSGHYSTLNELTGELNLMFEN--AKKFNPADSRLYRDAVKLQKLMQRKVQEF-- 157
I + L N ++ +F+ +K P + ++ + L+ + QR +Q
Sbjct: 184 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQR-IQNGSY 242
Query: 158 -SLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
S++ + ++ L+ +NAK +N ++++DA ++K+ K E+
Sbjct: 243 KSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEI 287
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 42/67 (62%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P L TI + +++G Y +++ + +++L+ +NAK +N S++++DA ++K+ K E
Sbjct: 227 PIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAE 286
Query: 157 FSLNELT 163
+E+T
Sbjct: 287 IEHHEMT 293
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 144 VKLQKLMQR-KVQEFS-LNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
+ L K+ Q+ K++E+ +N LT + L+F NAK + D Y+ A KL L R E
Sbjct: 92 IDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEF 151
Query: 202 M 202
+
Sbjct: 152 V 152
>sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1 SV=1
Length = 1689
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 33/226 (14%)
Query: 9 EGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENA 68
+G ++EPF LP+K+ PDYY+ IK P SL I LK+ Y TL+ L +LNLMFENA
Sbjct: 400 QGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA 459
Query: 69 KKFNPADSRLYRDAVKLQKLMQRKVQENPR--------SLLT--IGKTLKSGHYSTLNEL 118
K++N +S +Y+ +KLQ++MQ K +E R S+++ T + S N
Sbjct: 460 KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIR 519
Query: 119 TGELNLMFENA-KKFNPADSRL-------------YRDAVKLQ-KLMQRKVQEFSL--NE 161
+ ++F + P R Y D K+ + M K+ E ++ ++
Sbjct: 520 KQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
Query: 162 LTGE------LSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
GE + LMF NA+ +N ++Y DA L+KL++ K +E+
Sbjct: 580 YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKEL 625
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 37/220 (16%)
Query: 10 GGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
G L + F+ P+K+ PDYY+II P L I +++ Y+ + ++ LMF NA+
Sbjct: 539 GRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNAR 598
Query: 70 KFNPADSRLYRDAVKLQKLMQRKVQE-----------NPRSLLTIGKTLKSGHYSTLNEL 118
+N S++Y DA L+KL++ K +E +P+ L+ + + +
Sbjct: 599 HYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPM 658
Query: 119 TGELNLMFENAKKFN--------------PADSRLYRDAVKLQK----------LMQRKV 154
+LN ++E K + P+ S L + ++K +M K
Sbjct: 659 QQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKY 718
Query: 155 QEFSLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLM 194
Q+ ++ + + +MF NA +N + +Y+DA+ L K++
Sbjct: 719 QD--IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVL 756
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%)
Query: 10 GGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
G +SE F KLP+K PDYY IIK P L TI + +++G Y +++ + +++L+ +NAK
Sbjct: 201 GRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAK 260
Query: 70 KFNPADSRLYRDAVKLQKLMQRKVQE 95
+N S++++DA ++K+ K E
Sbjct: 261 TYNEPGSQVFKDANSIKKIFYMKKAE 286
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 33/225 (14%)
Query: 9 EGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENA 68
+G L E F++ P +R PDYY ++ P L+ I + LK Y +N LT + L+F NA
Sbjct: 64 QGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNA 123
Query: 69 KKFNPADSRLYRDAVKLQKLMQRKVQE---------------------------NPRSLL 101
K + DS Y+ A KL L R E +P L
Sbjct: 124 KSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPAYLK 183
Query: 102 TIGKTLKSGHYSTLNELTGELNLMFEN--AKKFNPADSRLYRDAVKLQKLMQRKVQEF-- 157
I + L N ++ +F+ +K P + ++ + L+ + QR +Q
Sbjct: 184 EILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQR-IQNGSY 242
Query: 158 -SLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
S++ + ++ L+ +NAK +N ++++DA ++K+ K E+
Sbjct: 243 KSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEI 287
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 41/67 (61%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P L TI + +++G Y +++ + +++L+ +NAK +N S++++DA ++K+ K E
Sbjct: 227 PIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAE 286
Query: 157 FSLNELT 163
+E+
Sbjct: 287 IEHHEMA 293
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 144 VKLQKLMQR-KVQEFS-LNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
+ L K+ Q+ K++E+ +N LT + L+F NAK + D Y+ A KL L R E
Sbjct: 92 IDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEF 151
Query: 202 M 202
+
Sbjct: 152 V 152
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%)
Query: 10 GGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
G L++ FL+LP+K+ PDYY IIK+P +L I K + Y TL + +L MF NA+
Sbjct: 1085 GRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDLMTMFNNAR 1144
Query: 70 KFNPADSRLYRDAVKLQKLMQRKVQE 95
+N S +Y DA K+Q M+ K++E
Sbjct: 1145 TYNEEGSFVYEDANKMQTAMETKIEE 1170
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 96 NPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQ 155
+P +L I K + Y TL + +L MF NA+ +N S +Y DA K+Q M+ K++
Sbjct: 1110 SPIALDAIRKHINGTFYKTLEAMKSDLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIE 1169
Query: 156 EF 157
E
Sbjct: 1170 EL 1171
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 112 YSTLNELTGE----LNLMFEN--AKKFNPADSRLYRDAVKLQKLMQRKVQEF--SLNELT 163
Y +NEL + LN +F +KK P + + + L + + F +L +
Sbjct: 1074 YKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAMK 1133
Query: 164 GELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
+L MF NA+ +N +Y DA K+Q M+ K++E+
Sbjct: 1134 SDLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIEEL 1171
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 5 KNQTEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLM 64
K+ +G LSEPF+KLP+++ PDYY IIK P + I + ++ Y+ LNEL + +
Sbjct: 1439 KHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKYADLNELEKDFMQL 1498
Query: 65 FENAKKFNPADSRLYRDAVKLQKL 88
+NA+ +N S +Y D++ LQK+
Sbjct: 1499 CQNAQIYNEEASLIYLDSIALQKV 1522
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%)
Query: 1 MRPQKNQTEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGE 60
MR Q ++ + + F KLP+KR PDY+++I+ P ++ I K K+G Y TL E+
Sbjct: 1262 MREQLDEVDSHPRTSIFEKLPSKRDYPDYFKVIEKPMAIDIILKNCKNGTYKTLEEVRQA 1321
Query: 61 LNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQEN 96
L MFENA+ +N S +Y DA KL + +E+
Sbjct: 1322 LQTMFENARFYNEEGSWVYVDADKLNEFTDEWFKEH 1357
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 92 KVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQ 151
KV E P ++ I K K+G Y TL E+ L MFENA+ +N S +Y DA KL +
Sbjct: 1292 KVIEKPMAIDIILKNCKNGTYKTLEEVRQALQTMFENARFYNEEGSWVYVDADKLNEFTD 1351
Query: 152 RKVQEFS 158
+E S
Sbjct: 1352 EWFKEHS 1358
>sp|O74964|RSC1_SCHPO Chromatin structure-remodeling complex subunit rsc1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rsc1 PE=1 SV=1
Length = 803
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%)
Query: 10 GGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
G L PF +LP R P+YY+ I+ P +L I K L Y T+ + + NLMF+NAK
Sbjct: 230 GRQLFAPFERLPDPRMFPEYYQAIEQPMALEVIQKKLSKHRYETIEQFVDDFNLMFDNAK 289
Query: 70 KFNPADSRLYRDA 82
FN S++YRDA
Sbjct: 290 SFNDPSSQVYRDA 302
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 95 ENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDA 143
E P +L I K L Y T+ + + NLMF+NAK FN S++YRDA
Sbjct: 254 EQPMALEVIQKKLSKHRYETIEQFVDDFNLMFDNAKSFNDPSSQVYRDA 302
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 148 KLMQRKVQEF---SLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQ-EVMI 203
+++Q+K+ + ++ + + +LMF+NAK FN ++YRDA L+ + ++ E
Sbjct: 260 EVIQKKLSKHRYETIEQFVDDFNLMFDNAKSFNDPSSQVYRDADFLKNYLADVLRLEAGK 319
Query: 204 LDIECQVYLISDELTHYQVVLTGTAEQVRLSG--LPDGDWLAFTLPVVSGK 252
LD E Y +D Q+ V + G L GDW+ P S K
Sbjct: 320 LDSEFFNYE-TDSRASPQLPKNDIQPAVSIDGTLLNVGDWVLIRNPADSSK 369
>sp|Q09948|RSC4_SCHPO Chromatin structure-remodeling complex subunit rsc4
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rsc4 PE=1 SV=1
Length = 542
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 4 QKNQTEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNL 63
++ +G L + F+ LP+KR PDYY IIK+P ++ + K K G Y+TL +LN
Sbjct: 157 EEKDEQGRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKMLEKRFKKGEYTTLESFVKDLNQ 216
Query: 64 MFENAKKFNPADSRLYRDAVK 84
MF NAK +N S +Y DA K
Sbjct: 217 MFINAKTYNAPGSFVYEDAEK 237
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 9 EGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENA 68
EG + F +LP+KRY PDYY+II+ P + K+G Y ++ + ++ LM NA
Sbjct: 29 EGNPFDDIFEELPSKRYFPDYYQIIQKPICYKMMRNKAKTGKYLSMGDFYDDIRLMVSNA 88
Query: 69 KKFNPADSRLYRDAV 83
+ +N S +Y +V
Sbjct: 89 QTYNMPGSLVYECSV 103
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 77 RLYRDAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPAD 136
RLY D ++ K +P ++ + K K G Y+TL +LN MF NAK +N
Sbjct: 177 RLYPDYYEIIK--------SPMTIKMLEKRFKKGEYTTLESFVKDLNQMFINAKTYNAPG 228
Query: 137 SRLYRDAVK 145
S +Y DA K
Sbjct: 229 SFVYEDAEK 237
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 53/84 (63%)
Query: 5 KNQTEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLM 64
K+ + G LSE F++LP+++ P+YY +I+ P I + +++ Y +LN+L ++ L+
Sbjct: 1473 KDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLL 1532
Query: 65 FENAKKFNPADSRLYRDAVKLQKL 88
+NA+ FN S +Y D++ LQ +
Sbjct: 1533 CQNAQTFNLEGSLIYEDSIVLQSV 1556
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKL 149
P I + +++ Y +LN+L ++ L+ +NA+ FN S +Y D++ LQ +
Sbjct: 1504 PVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSV 1556
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 53/84 (63%)
Query: 5 KNQTEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLM 64
K+ + G LSE F++LP+++ P+YY +I+ P I + +++ Y +LN+L ++ L+
Sbjct: 1432 KDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLL 1491
Query: 65 FENAKKFNPADSRLYRDAVKLQKL 88
+NA+ FN S +Y D++ LQ +
Sbjct: 1492 CQNAQTFNLEGSLIYEDSIVLQSV 1515
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKL 149
P I + +++ Y +LN+L ++ L+ +NA+ FN S +Y D++ LQ +
Sbjct: 1463 PVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSV 1515
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%)
Query: 10 GGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
G LS+ FL P+K PDYY IIK P + I +++ Y++L E + +L+F NA+
Sbjct: 1569 GRKLSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNSLKETLQDFHLIFSNAR 1628
Query: 70 KFNPADSRLYRDAVKLQKLMQRKVQE 95
+N S +Y D+++L+K++ +K E
Sbjct: 1629 IYNTEGSVVYEDSLELEKVVTKKYCE 1654
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 36/61 (59%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P + I +++ Y++L E + +L+F NA+ +N S +Y D+++L+K++ +K E
Sbjct: 1595 PVAFDNINTHIETLAYNSLKETLQDFHLIFSNARIYNTEGSVVYEDSLELEKVVTKKYCE 1654
Query: 157 F 157
Sbjct: 1655 I 1655
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 158 SLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEVM 202
SL E + L+F NA+ +N +Y D+++L+K++ +K E+M
Sbjct: 1612 SLKETLQDFHLIFSNARIYNTEGSVVYEDSLELEKVVTKKYCEIM 1656
>sp|Q9UUK2|GCN5_SCHPO Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gcn5 PE=1 SV=1
Length = 454
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 53/89 (59%)
Query: 14 SEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNP 73
S PF++ +K PDYY +I++P L T+ L++ Y ++ E + +F+N + +N
Sbjct: 365 SWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYIFDNCRSYND 424
Query: 74 ADSRLYRDAVKLQKLMQRKVQENPRSLLT 102
+++ Y++A +L+K Q+K++E S L
Sbjct: 425 SNTTYYKNADRLEKFFQKKLRETEYSHLA 453
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 42/72 (58%)
Query: 92 KVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQ 151
+V E+P L T+ L++ Y ++ E + +F+N + +N +++ Y++A +L+K Q
Sbjct: 382 EVIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNTTYYKNADRLEKFFQ 441
Query: 152 RKVQEFSLNELT 163
+K++E + L
Sbjct: 442 KKLRETEYSHLA 453
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%)
Query: 152 RKVQEFSLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQE 200
R Q S+ E + +F+N + +N ++ Y++A +L+K Q+K++E
Sbjct: 398 RNNQYESVEEFIRDAKYIFDNCRSYNDSNTTYYKNADRLEKFFQKKLRE 446
>sp|Q93ZB7|GTE11_ARATH Transcription factor GTE11 OS=Arabidopsis thaliana GN=GTE11 PE=1
SV=1
Length = 620
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQ 86
PDY+ IIK+P L T+ L SG YS+ +E + ++ L F NA +NP+D+ +YR A L
Sbjct: 161 PDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTLS 220
Query: 87 KLMQ 90
K +
Sbjct: 221 KFFE 224
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 81 DAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLY 140
D VKL + ++P L T+ L SG YS+ +E + ++ L F NA +NP+D+ +Y
Sbjct: 154 DVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVY 213
Query: 141 RDAVKLQKLMQ 151
R A L K +
Sbjct: 214 RFADTLSKFFE 224
Score = 30.8 bits (68), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 158 SLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQ 195
S +E + ++ L F NA +NP+D +YR A L K +
Sbjct: 187 SPSEFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFE 224
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 51/81 (62%)
Query: 8 TEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFEN 67
+ G LSE F++LP+++ P+YY +I+ P I + +++ Y +LN+L ++ L+ +N
Sbjct: 1442 SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQN 1501
Query: 68 AKKFNPADSRLYRDAVKLQKL 88
A+ FN S +Y D++ LQ +
Sbjct: 1502 AQTFNLEGSLIYEDSIVLQSV 1522
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKL 149
P I + +++ Y +LN+L ++ L+ +NA+ FN S +Y D++ LQ +
Sbjct: 1470 PVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSV 1522
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 51/81 (62%)
Query: 8 TEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFEN 67
+ G LSE F++LP+++ P+YY +I+ P I + +++ Y +LN+L ++ L+ +N
Sbjct: 1442 SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQN 1501
Query: 68 AKKFNPADSRLYRDAVKLQKL 88
A+ FN S +Y D++ LQ +
Sbjct: 1502 AQTFNLEGSLIYEDSIVLQSV 1522
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKL 149
P I + +++ Y +LN+L ++ L+ +NA+ FN S +Y D++ LQ +
Sbjct: 1470 PVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSV 1522
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 17 FLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADS 76
FL P ++ PDYY IIK P +L I + +K+ Y + EL + LMF NA +N S
Sbjct: 1544 FLYPPNRKLYPDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMFNNAYTYNEEHS 1603
Query: 77 RLYRDAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPAD 136
+Y DA ++K ++ +++ L +L + LNE L + EN++ P D
Sbjct: 1604 IVYEDAKLMEKTLKEVIED-----LEKNNSLHAYEEEALNEEQASL-VFLENSEAELPLD 1657
Query: 137 S 137
S
Sbjct: 1658 S 1658
Score = 38.5 bits (88), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 62 NLMFENAKKFN-----PADSRLYRDAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYSTLN 116
NL E+ + N P + +LY D + K P +L I + +K+ Y +
Sbjct: 1531 NLQSEDGRFVNGLFLYPPNRKLYPDYYIIIK--------RPIALGKIKRNIKNDRYGDVG 1582
Query: 117 ELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQEFSLN 160
EL + LMF NA +N S +Y DA ++K ++ +++ N
Sbjct: 1583 ELIADFMLMFNNAYTYNEEHSIVYEDAKLMEKTLKEVIEDLEKN 1626
>sp|Q8WZM0|GCN5_YARLI Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GCN5 PE=3 SV=1
Length = 464
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 16 PFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPAD 75
PF + + PDYY +IK P L T+ + L++ Y T+ E + L+F N + +N
Sbjct: 376 PFAQAVNRDEVPDYYEVIKEPMDLSTMEQRLEADSYKTMEEFVYDARLVFNNCRAYNNET 435
Query: 76 SRLYRDAVKLQKLMQRKVQENP 97
+ Y++A KL+K M K++E P
Sbjct: 436 TTYYKNANKLEKFMVAKIKEIP 457
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 50 HYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQENPRSLLTIGKTLKS 109
H++ + + EL +N P + RD V +V + P L T+ + L++
Sbjct: 357 HFAVMQHVLSEL----QNHASAWPFAQAVNRDEVP----DYYEVIKEPMDLSTMEQRLEA 408
Query: 110 GHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
Y T+ E + L+F N + +N + Y++A KL+K M K++E
Sbjct: 409 DSYKTMEEFVYDARLVFNNCRAYNNETTTYYKNANKLEKFMVAKIKE 455
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 158 SLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEV 201
++ E + L+F N + +N Y++A KL+K M K++E+
Sbjct: 413 TMEEFVYDARLVFNNCRAYNNETTTYYKNANKLEKFMVAKIKEI 456
>sp|Q02206|RSC4_YEAST Chromatin structure-remodeling complex subunit RSC4
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC4 PE=1 SV=2
Length = 625
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%)
Query: 5 KNQTEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLM 64
KN + LSEPF++L K P+YY I+ +P +L + + L+ G YS + + ++ L+
Sbjct: 201 KNLDDKVKLSEPFMELVDKDELPEYYEIVHSPMALSIVKQNLEIGQYSKIYDFIIDMLLV 260
Query: 65 FENAKKFNPADSRLYRDAVKLQKLMQRKVQ 94
F+NA FN + +Y+DA L +Q
Sbjct: 261 FQNAHIFNDPSALIYKDATTLTNYFNYLIQ 290
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 92 KVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQ 151
++ +P +L + + L+ G YS + + ++ L+F+NA FN + +Y+DA L
Sbjct: 227 EIVHSPMALSIVKQNLEIGQYSKIYDFIIDMLLVFQNAHIFNDPSALIYKDATTLTNYFN 286
Query: 152 RKVQ-EF-----SLNELTGELSLMFE 171
+Q EF LNE GE++L F+
Sbjct: 287 YLIQKEFFPELQDLNE-RGEINLEFD 311
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 17 FLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADS 76
F+KLP+++++P YY I+ P S+ I K+ + + ++ L+ +N + +N DS
Sbjct: 80 FIKLPSRKFHPQYYYKIQQPMSINEI-KSRDYEYEDGPSNFLLDVELLTKNCQAYNEYDS 138
Query: 77 RLYRDAVKLQKLMQRKV 93
+ ++++++ L++ +V
Sbjct: 139 LIVKNSMQVVMLIEFEV 155
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 8 TEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFEN 67
+ G LSE F++LP+++ P+YY +I+ P I + +++ Y +L +L ++ L+ N
Sbjct: 1418 SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHN 1477
Query: 68 AKKFNPADSRLYRDAVKLQKLMQRKVQ 94
A+ FN S++Y D++ LQ + + Q
Sbjct: 1478 AQTFNLEGSQIYEDSIVLQSVFKSARQ 1504
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P I + +++ Y +L +L ++ L+ NA+ FN S++Y D++ LQ + + Q+
Sbjct: 1446 PVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQK 1505
Query: 157 FS 158
+
Sbjct: 1506 IA 1507
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 53/88 (60%)
Query: 8 TEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFEN 67
+ G LSE F++LP+++ P+YY +I+ P I + +++ Y +L +L ++ L+ N
Sbjct: 1405 SSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHN 1464
Query: 68 AKKFNPADSRLYRDAVKLQKLMQRKVQE 95
A+ FN S++Y D++ LQ + + Q+
Sbjct: 1465 AQTFNLEGSQIYEDSIVLQSVFKSARQK 1492
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P I + +++ Y +L +L ++ L+ NA+ FN S++Y D++ LQ + + Q+
Sbjct: 1433 PVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQK 1492
Query: 157 FS 158
+
Sbjct: 1493 IA 1494
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 16 PFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPAD 75
PF++ + PDYY++IK P L + L+S Y+ L+E G++ +F+N + +NP +
Sbjct: 2580 PFMEPVDPKEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDMTKIFDNCRYYNPKE 2639
Query: 76 SRLYRDAVKLQKLMQRKVQ 94
S Y+ A L+ +K++
Sbjct: 2640 SSFYKCAEALESYFVQKIK 2658
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 92 KVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQ 151
KV + P L + L+S Y+ L+E G++ +F+N + +NP +S Y+ A L+
Sbjct: 2595 KVIKEPMDLKRMEIKLESNTYTKLSEFIGDMTKIFDNCRYYNPKESSFYKCAEALESYFV 2654
Query: 152 RKVQEFSLN 160
+K++ F N
Sbjct: 2655 QKIKNFREN 2663
>sp|Q9NR48|ASH1L_HUMAN Histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L
PE=1 SV=2
Length = 2969
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 13 LSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFN 72
L+ P L LP K+ N DYY I +P L+TI K + +G+Y T+ ++ +F NA+K+
Sbjct: 2467 LAAPLLNLPPKKKNADYYEKISDPLDLITIEKQILTGYYKTVEAFDADMLKVFRNAEKYY 2526
Query: 73 PADSRLYRDAVKLQK 87
S + RD +L+K
Sbjct: 2527 GRKSPVGRDVCRLRK 2541
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 96 NPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQ 155
+P L+TI K + +G+Y T+ ++ +F NA+K+ S + RD +L+K
Sbjct: 2489 DPLDLITIEKQILTGYYKTVEAFDADMLKVFRNAEKYYGRKSPVGRDVCRLRKAYYNARH 2548
Query: 156 EFS--LNELTGELS 167
E S ++E+ GE +
Sbjct: 2549 EASAQIDEIVGETA 2562
>sp|Q9H0E9|BRD8_HUMAN Bromodomain-containing protein 8 OS=Homo sapiens GN=BRD8 PE=1 SV=2
Length = 1235
Score = 55.5 bits (132), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 13 LSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFN 72
S PFLK ++R P Y ++K P L ++ + L G T+ + +L LMF+NA +N
Sbjct: 1124 FSSPFLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLMLMFQNAVMYN 1183
Query: 73 PADSRLYRDAVKLQKLMQRKVQ 94
+D +Y AV++++ + ++Q
Sbjct: 1184 DSDHHVYHMAVEMRQEVLEQIQ 1205
Score = 48.5 bits (114), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 17 FLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADS 76
FL+ P Y+ I++ P L TI K +++G + E ++ LMF+NA +N +D
Sbjct: 732 FLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDH 791
Query: 77 RLYRDAVKLQKLMQRKVQE 95
+Y AV++Q+ + ++Q+
Sbjct: 792 DVYHMAVEMQRDVLEQIQQ 810
Score = 45.4 bits (106), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 93 VQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQR 152
+ + P L TI K +++G + E ++ LMF+NA +N +D +Y AV++Q+ +
Sbjct: 747 IVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLE 806
Query: 153 KVQEFSLNELTGELSLMFENAKKFNPADLRLYRDA 187
++Q+F +L + S +AK D +DA
Sbjct: 807 QIQQFLATQLIMQTSESGISAKSLRGRDSTRKQDA 841
Score = 42.4 bits (98), Expect = 0.003, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 RKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQK-- 148
+ V + P L ++ + L G T+ + +L LMF+NA +N +D +Y AV++++
Sbjct: 1141 KDVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLMLMFQNAVMYNDSDHHVYHMAVEMRQEV 1200
Query: 149 LMQRKVQEFSLNELTGELSLMFENAKKFNPAD 180
L Q +V L++ G SL E A NP D
Sbjct: 1201 LEQIQVLNIWLDKRKGSSSLEGEPA---NPVD 1229
Score = 31.6 bits (70), Expect = 5.3, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 158 SLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEVM 202
S E ++ LMF+NA +N +D +Y AV++Q+ + ++Q+ +
Sbjct: 768 STAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFL 812
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 13 LSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFN 72
++ PFL+ PDYY +IK P L T+ + ++ +Y L E ++ +F+N + +N
Sbjct: 2948 MAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYN 3007
Query: 73 PADSRLYRDAVKLQKLMQRKVQ 94
P+DS Y+ A L+ +K++
Sbjct: 3008 PSDSPFYQCAEVLESFFVQKLK 3029
Score = 38.5 bits (88), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 93 VQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQR 152
V + P L T+ + ++ +Y L E ++ +F+N + +NP+DS Y+ A L+ +
Sbjct: 2967 VIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQ 3026
Query: 153 KVQEF 157
K++ F
Sbjct: 3027 KLKGF 3031
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 142 DAVKLQKLMQRKVQEFSLNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQ 199
D +++ +QR+ E L E +++ +F+N + +NP+D Y+ A L+ +K++
Sbjct: 2973 DLATMEERVQRRYYE-KLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLK 3029
>sp|Q338B9|GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica
GN=GCN5 PE=2 SV=1
Length = 511
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 16 PFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKS-GHYSTLNELTGELNLMFENAKKFNPA 74
PF + R PDYY IIK+P L T+ K ++S +Y TL ++ MF NAK +N
Sbjct: 422 PFKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSP 481
Query: 75 DSRLYRDAVKLQKLMQRKV 93
D+ Y+ A +L+ KV
Sbjct: 482 DTIYYKCASRLESFFSNKV 500
Score = 37.7 bits (86), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 73 PADSRLYRDAVKLQKLMQRKVQENPRSLLTIGKTLKS-GHYSTLNELTGELNLMFENAKK 131
P DSR D + K +P L T+ K ++S +Y TL ++ MF NAK
Sbjct: 426 PVDSRDVPDYYDIIK--------DPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKT 477
Query: 132 FNPADSRLYRDAVKLQKLMQRKV 154
+N D+ Y+ A +L+ KV
Sbjct: 478 YNSPDTIYYKCASRLESFFSNKV 500
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 134 PADSR-------LYRDAVKLQKLMQRKVQE---FSLNELTGELSLMFENAKKFNPADLRL 183
P DSR + +D + L+ + +R E +L ++ MF NAK +N D
Sbjct: 426 PVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPDTIY 485
Query: 184 YRDAVKLQKLMQRKV 198
Y+ A +L+ KV
Sbjct: 486 YKCASRLESFFSNKV 500
>sp|Q99MY8|ASH1L_MOUSE Histone-lysine N-methyltransferase ASH1L OS=Mus musculus GN=Ash1l
PE=1 SV=3
Length = 2958
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 13 LSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFN 72
L+ P L LP K+ N DYY I +P L TI K + G+Y T+ ++ +F NA+K+
Sbjct: 2456 LAAPLLNLPPKKKNADYYEKISDPLDLSTIEKQILIGYYKTVEAFDADMLKVFRNAEKYY 2515
Query: 73 PADSRLYRDAVKLQK 87
S + RD +L+K
Sbjct: 2516 GRKSPIGRDVCRLRK 2530
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 96 NPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQ 155
+P L TI K + G+Y T+ ++ +F NA+K+ S + RD +L+K
Sbjct: 2478 DPLDLSTIEKQILIGYYKTVEAFDADMLKVFRNAEKYYGRKSPIGRDVCRLRKAYYSARH 2537
Query: 156 EFS--LNELTGELS 167
E S ++E+ GE +
Sbjct: 2538 EASAQIDEIVGETA 2551
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 14 SEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNP 73
S PFLKL +K PDYY IIK P +L I + + Y +E ++ LMF N ++NP
Sbjct: 1450 SWPFLKLVSKIQVPDYYDIIKKPIALNIIREKVNKCEYKLASEFIDDIELMFSNCFEYNP 1509
Query: 74 ADSRLYRDAVKLQKLMQRKVQ 94
++ + +LQ + Q
Sbjct: 1510 RNTSEAKAGTRLQAFFHIQAQ 1530
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P +L I + + Y +E ++ LMF N ++NP ++ + +LQ + Q+
Sbjct: 1472 PIALNIIREKVNKCEYKLASEFIDDIELMFSNCFEYNPRNTSEAKAGTRLQAFFHIQAQK 1531
Query: 157 FSLN 160
L+
Sbjct: 1532 LGLH 1535
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 14 SEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNP 73
S PFLKL +K PDYY IIK P +L I + + Y +E ++ LMF N ++NP
Sbjct: 1451 SWPFLKLVSKIQVPDYYDIIKKPIALNIIREKVNKCEYKLASEFIDDIELMFSNCFEYNP 1510
Query: 74 ADSRLYRDAVKLQKLMQRKVQ 94
++ + +LQ + Q
Sbjct: 1511 RNTSEAKAGTRLQAFFHIQAQ 1531
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P +L I + + Y +E ++ LMF N ++NP ++ + +LQ + Q+
Sbjct: 1473 PIALNIIREKVNKCEYKLASEFIDDIELMFSNCFEYNPRNTSEAKAGTRLQAFFHIQAQK 1532
Query: 157 FSLN 160
L+
Sbjct: 1533 LGLH 1536
>sp|Q9BXF3|CECR2_HUMAN Cat eye syndrome critical region protein 2 OS=Homo sapiens GN=CECR2
PE=1 SV=2
Length = 1484
Score = 53.1 bits (126), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 14 SEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNP 73
S PFL+ + Y P+YY+IIK P + ++ K L G Y T E ++ MF N +K+N
Sbjct: 456 SWPFLEPVDESYAPNYYQIIKAPMDISSMEKKLNGGLYCTKEEFVNDMKTMFRNCRKYNG 515
Query: 74 ADSRLYRDAVKLQKLMQRKVQEN 96
S + + L++ R + ++
Sbjct: 516 ESSEYTKMSDNLERCFHRAMMKH 538
Score = 32.3 bits (72), Expect = 3.0, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 92 KVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQ 151
++ + P + ++ K L G Y T E ++ MF N +K+N S + + L++
Sbjct: 473 QIIKAPMDISSMEKKLNGGLYCTKEEFVNDMKTMFRNCRKYNGESSEYTKMSDNLERCFH 532
Query: 152 RKVQE 156
R + +
Sbjct: 533 RAMMK 537
>sp|Q92830|KAT2A_HUMAN Histone acetyltransferase KAT2A OS=Homo sapiens GN=KAT2A PE=1 SV=3
Length = 837
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 16 PFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPAD 75
PF++ K PDYY +I+ P L T+ + L+S +Y T +L + N +++NP D
Sbjct: 752 PFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPD 811
Query: 76 SRLYRDAVKLQKLMQRKVQEN 96
S R A L+K K++E
Sbjct: 812 SEYCRCASALEKFFYFKLKEG 832
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P L T+ + L+S +Y T +L + N +++NP DS R A L+K K++E
Sbjct: 772 PIDLKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKE 831
Query: 157 FSL 159
L
Sbjct: 832 GGL 834
>sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1
SV=1
Length = 568
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 16 PFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKS-GHYSTLNELTGELNLMFENAKKFNPA 74
PF + R PDYY IIK+P L I K ++S +Y TL+ + MF N + +N
Sbjct: 479 PFKEPVDSRDVPDYYDIIKDPIDLKVIAKRVESEQYYVTLDMFVADARRMFNNCRTYNSP 538
Query: 75 DSRLYRDAVKLQKLMQRKVQ 94
D+ Y+ A +L+ KVQ
Sbjct: 539 DTIYYKCATRLETHFHSKVQ 558
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 73 PADSRLYRDAVKLQKLMQRKVQENPRSLLTIGKTLKS-GHYSTLNELTGELNLMFENAKK 131
P DSR D + K +P L I K ++S +Y TL+ + MF N +
Sbjct: 483 PVDSRDVPDYYDIIK--------DPIDLKVIAKRVESEQYYVTLDMFVADARRMFNNCRT 534
Query: 132 FNPADSRLYRDAVKLQKLMQRKVQ 155
+N D+ Y+ A +L+ KVQ
Sbjct: 535 YNSPDTIYYKCATRLETHFHSKVQ 558
>sp|Q03330|GCN5_YEAST Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GCN5 PE=1 SV=1
Length = 439
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 16 PFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPAD 75
PFL+ K PDYY IK P L T+ L+S Y + + + L+F N + +N +
Sbjct: 351 PFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIYDARLVFNNCRMYNGEN 410
Query: 76 SRLYRDAVKLQKLMQRKVQENP 97
+ Y+ A +L+K KV+E P
Sbjct: 411 TSYYKYANRLEKFFNNKVKEIP 432
Score = 34.3 bits (77), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P L T+ L+S Y + + + L+F N + +N ++ Y+ A +L+K KV+E
Sbjct: 371 PMDLSTMEIKLESNKYQKMEDFIYDARLVFNNCRMYNGENTSYYKYANRLEKFFNNKVKE 430
Query: 157 F 157
Sbjct: 431 I 431
>sp|Q9JHD2|KAT2A_MOUSE Histone acetyltransferase KAT2A OS=Mus musculus GN=Kat2a PE=2 SV=2
Length = 830
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 16 PFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPAD 75
PF++ K PDYY +I+ P L T+ + L+S +Y T +L + N +++NP D
Sbjct: 745 PFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPD 804
Query: 76 SRLYRDAVKLQKLMQRKVQEN 96
S R A L+K K++E
Sbjct: 805 SEYCRCASALEKFFYFKLKEG 825
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P L T+ + L+S +Y T +L + N +++NP DS R A L+K K++E
Sbjct: 765 PIDLKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKE 824
Query: 157 FSL 159
L
Sbjct: 825 GGL 827
>sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis
elegans GN=nurf-1 PE=1 SV=2
Length = 2194
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQ 86
PDY + IK P L TI K ++ Y L++ ++N MFENAK +NP + +++ A +Q
Sbjct: 2065 PDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKTYNPKGNAVFKCAETMQ 2124
Query: 87 KLMQRKV 93
++ +K+
Sbjct: 2125 EVFDKKL 2131
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 76 SRLYRDAVKLQKLMQ-RKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNP 134
S +R+ V L + K + P L TI K ++ Y L++ ++N MFENAK +NP
Sbjct: 2052 STPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKTYNP 2111
Query: 135 ADSRLYRDAVKLQKLMQRKVQEFSLNELTGELSLMFENAKKFNP 178
+ +++ A +Q++ +K+ + + L+ A++ +P
Sbjct: 2112 KGNAVFKCAETMQEVFDKKLIDVREQMTARQQMLLLATAQQQDP 2155
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 159 LNELTGELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEVMILDIECQVYLISDELT 218
L++ +++ MFENAK +NP +++ A +Q++ +K ++D+ Q+
Sbjct: 2092 LSQFVNDVNQMFENAKTYNPKGNAVFKCAETMQEVFDKK-----LIDVREQM------TA 2140
Query: 219 HYQVVLTGTAEQ 230
Q++L TA+Q
Sbjct: 2141 RQQMLLLATAQQ 2152
>sp|Q58F21|BRDT_HUMAN Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1
SV=4
Length = 947
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQ 86
PDYY IIKNP L TI K L++ +Y+ +E + N MF N +N + A L+
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 87 KLMQRKVQENPRSLLTIG 104
KL +K+ + P+ +G
Sbjct: 124 KLFMQKLSQMPQEEQVVG 141
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 25 YNP---------DYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPAD 75
YNP +YY ++KNP L TI + + + Y + ++ LMF N K+NP D
Sbjct: 296 YNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPD 355
Query: 76 SRLYRDAVKLQKLMQ 90
+ A LQ + +
Sbjct: 356 HEVVTMARMLQDVFE 370
Score = 37.7 bits (86), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 81 DAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLY 140
DAVKLQ + +NP L TI K L++ +Y+ +E + N MF N +N +
Sbjct: 57 DAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIV 116
Query: 141 RDAVKLQKLMQRKVQEFSLNE 161
A L+KL +K+ + E
Sbjct: 117 LMAQALEKLFMQKLSQMPQEE 137
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 16/86 (18%)
Query: 71 FNPADSRL-----YRDAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLM 125
+NP D Y D VK NP L TI + + + Y + ++ LM
Sbjct: 296 YNPVDVNALGLHNYYDVVK-----------NPMDLGTIKEKMDNQEYKDAYKFAADVRLM 344
Query: 126 FENAKKFNPADSRLYRDAVKLQKLMQ 151
F N K+NP D + A LQ + +
Sbjct: 345 FMNCYKYNPPDHEVVTMARMLQDVFE 370
>sp|F1QW93|BRDT_DANRE Bromodomain testis-specific protein OS=Danio rerio GN=brdt PE=2
SV=2
Length = 918
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 12 NLSEPFLK-LPAKRYN-PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
+ S PF + + A R N PDYY IIKNP L TI K L++ +Y E + N MF N
Sbjct: 49 HFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCY 108
Query: 70 KFN-PADSRLYRDAVKLQKLMQRKVQENPR-----SLLTIGKTLKSGHYSTL 115
+N P D + V L+KL KV E P S LT +K ST+
Sbjct: 109 VYNRPGDDIVLMAQV-LEKLFLEKVAEMPEEEYEISALTTKGPVKGARKSTI 159
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 28 DYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQK 87
DY+ II P + TI K +++ Y+ + ++ LMF N K+NP + A KLQ
Sbjct: 308 DYHEIIHQPMDMSTIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQD 367
Query: 88 LMQ---RKVQENPR 98
+ + K+ + P+
Sbjct: 368 VFEFRFSKIPDEPK 381
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 81 DAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLY 140
DA L L ++ P + TI K +++ Y+ + ++ LMF N K+NP +
Sbjct: 300 DAETLGLLDYHEIIHQPMDMSTIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVV 359
Query: 141 RDAVKLQKLMQRKVQEFSLNELTGE 165
A KLQ + EF +++ E
Sbjct: 360 SMARKLQDVF-----EFRFSKIPDE 379
Score = 34.7 bits (78), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 81 DAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFN-PADSRL 139
DAV+L + +NP L TI K L++ +Y E + N MF N +N P D +
Sbjct: 59 DAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIV 118
Query: 140 YRDAVKLQKLMQRKVQEFSLNE 161
V L+KL KV E E
Sbjct: 119 LMAQV-LEKLFLEKVAEMPEEE 139
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGH--YSTLNELTGELNLMFENAKKFNPADSRLYRDAVK 84
PDYY+IIKNP L TI K L+ + YS + + L+F+N +FN DS + +K
Sbjct: 933 PDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNEPDSEVANAGIK 992
Query: 85 LQ 86
L+
Sbjct: 993 LE 994
Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 76 SRLYRDAVKLQKLMQRKVQENPRSLLTIGKTLKSGH--YSTLNELTGELNLMFENAKKFN 133
S ++D V L K+ +NP L TI K L+ + YS + + L+F+N +FN
Sbjct: 921 SLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFN 980
Query: 134 PADSRLYRDAVKLQ 147
DS + +KL+
Sbjct: 981 EPDSEVANAGIKLE 994
>sp|P53236|RSC1_YEAST Chromatin structure-remodeling complex subunit RSC1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC1 PE=1 SV=1
Length = 928
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 17 FLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADS 76
F LP K+ PDYY II+NP SL T+ K L HY++ + + + NA +N DS
Sbjct: 35 FNVLPPKKEYPDYYIIIRNPISLNTLKKRLP--HYTSPQDFVNDFAQIPWNAMTYNAKDS 92
Query: 77 RLYRDAVKLQKLMQRKVQENPR 98
+Y+ A+ L+ ++ K+ N R
Sbjct: 93 VIYKYAILLESFIKGKIVHNIR 114
Score = 37.7 bits (86), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%)
Query: 17 FLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADS 76
F KLP + P YY +I +P L+ I K +KS Y + + LM N K + D
Sbjct: 263 FEKLPDRNEEPTYYSVITDPICLMDIRKKVKSRKYRNFHTFEEDFQLMLTNFKLYYSQDQ 322
Query: 77 RLYRDAVKLQKLMQRKVQ 94
A L+K R V+
Sbjct: 323 SNIIRAQLLEKNFNRLVR 340
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 96 NPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKV 154
NP SL T+ K L HY++ + + + NA +N DS +Y+ A+ L+ ++ K+
Sbjct: 53 NPISLNTLKKRLP--HYTSPQDFVNDFAQIPWNAMTYNAKDSVIYKYAILLESFIKGKI 109
>sp|Q9HGP4|YK82_SCHPO Bromodomain-containing protein C631.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC631.02 PE=1 SV=3
Length = 727
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 21 PAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYR 80
P K+ PDY IIKNP L T+ K SG YS+ ++NLMF N +N +S +
Sbjct: 260 PVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLYNGTESPVGV 319
Query: 81 DAVKLQKLMQRKVQENPRSLLT 102
LQ +R++++ P + +T
Sbjct: 320 MGKNLQATFERQLKQLPSAYVT 341
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 16 PFLKL--PAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNP 73
PF K P PDY+++IK+P L T+ L Y+++ ++ LMF+N KFN
Sbjct: 415 PFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNS 474
Query: 74 ADSRLYRDAVKLQKLMQR 91
A + ++ KL+ + Q+
Sbjct: 475 AGTPVHLMGKKLESIFQK 492
Score = 35.0 bits (79), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 92 KVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQ 151
KV ++P L T+ L Y+++ ++ LMF+N KFN A + ++ KL+ + Q
Sbjct: 432 KVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQ 491
Query: 152 R 152
+
Sbjct: 492 K 492
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 96 NPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQ 155
NP L T+ K SG YS+ ++NLMF N +N +S + LQ +R+++
Sbjct: 274 NPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLYNGTESPVGVMGKNLQATFERQLK 333
Query: 156 EF 157
+
Sbjct: 334 QL 335
>sp|D4A7T3|BRDT_RAT Bromodomain testis-specific protein OS=Rattus norvegicus GN=Brdt
PE=1 SV=1
Length = 952
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQ 86
PDYY II+ P L TI K L++ +Y +E G+ N MF N +N + A L+
Sbjct: 63 PDYYTIIETPMDLSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALE 122
Query: 87 KLMQRKVQENPRSLLTIG 104
KL +K+ + P+ +G
Sbjct: 123 KLFMQKLSQMPQEEQIVG 140
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 25 YNP---------DYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPAD 75
YNP +YY I+KNP L TI + Y E ++ LMF N K+NP D
Sbjct: 295 YNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNPPD 354
Query: 76 SRLYRDAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYST 114
+ A LQ + + + P + +++++ H +T
Sbjct: 355 HEVVTMARMLQDVFEMHFAKIPDEPV---ESMRACHLTT 390
Score = 37.4 bits (85), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 81 DAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLY 140
DA KL+ + E P L TI K L++ +Y +E G+ N MF N +N +
Sbjct: 56 DAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIV 115
Query: 141 RDAVKLQKLMQRKVQEFSLNE 161
A L+KL +K+ + E
Sbjct: 116 VMAQALEKLFMQKLSQMPQEE 136
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGH--YSTLNELTGELNLMFENAKKFNPADSRLYRDAVK 84
PDYY+IIKNP L TI K L+ + Y+ + + L+F+N +FN DS + +K
Sbjct: 934 PDYYKIIKNPMDLSTIKKRLQEDYCMYTKPEDFVADFRLIFQNCAEFNEPDSEVANAGIK 993
Query: 85 LQKLMQ 90
L+ +
Sbjct: 994 LESYFE 999
Score = 37.7 bits (86), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 79 YRDAVKLQKLMQRKVQENPRSLLTIGKTLKSGH--YSTLNELTGELNLMFENAKKFNPAD 136
++D V L K+ +NP L TI K L+ + Y+ + + L+F+N +FN D
Sbjct: 925 FQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYCMYTKPEDFVADFRLIFQNCAEFNEPD 984
Query: 137 SRLYRDAVKLQKLMQ 151
S + +KL+ +
Sbjct: 985 SEVANAGIKLESYFE 999
>sp|Q92831|KAT2B_HUMAN Histone acetyltransferase KAT2B OS=Homo sapiens GN=KAT2B PE=1 SV=3
Length = 832
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 7 QTEGGNLSEPFLKLPAKRYN-PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMF 65
Q + + PF++ P KR P YY +I+ P L T+ + LK+ +Y + +L +F
Sbjct: 738 QVKSHQSAWPFME-PVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKLFMADLQRVF 796
Query: 66 ENAKKFNPADSRLYRDAVKLQKLMQRKVQE 95
N K++NP +S Y+ A L+K K++E
Sbjct: 797 TNCKEYNPPESEYYKCANILEKFFFSKIKE 826
Score = 38.5 bits (88), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P L T+ + LK+ +Y + +L +F N K++NP +S Y+ A L+K K++E
Sbjct: 767 PMDLKTMSERLKNRYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKE 826
Query: 157 FSL 159
L
Sbjct: 827 AGL 829
Score = 31.2 bits (69), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 164 GELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEVMILD 205
+L +F N K++NP + Y+ A L+K K++E ++D
Sbjct: 790 ADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAGLID 831
>sp|Q06488|RSC2_YEAST Chromatin structure-remodeling complex subunit RSC2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC2 PE=1 SV=1
Length = 889
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 7 QTEGGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFE 66
+ G +S F LP K+ PDYY +IKNP S T+ K + HY+ + ++ +
Sbjct: 33 EDSGLEISPIFNVLPPKKDYPDYYAVIKNPVSFNTLKKRIP--HYTDAQQFMNDVVQIPW 90
Query: 67 NAKKFNPADSRLYRDAVKLQKLMQRKVQEN 96
NAK +N DS +Y+ A+ L+K ++ + N
Sbjct: 91 NAKTYNTRDSGIYKYALVLEKYLKDTIYPN 120
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 10 GGNLSEPFLKLPAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAK 69
G L++ F +LP + + +YY +I NP SL I K +K+ Y T E + NLM N +
Sbjct: 296 GIGLTDLFERLPDRHRDANYYIMIANPISLQDINKKVKTRRYKTFQEFQNDFNLMLTNFR 355
Query: 70 KFNPADSRLYRDAVKLQKLMQR 91
+ D +++K+ ++++
Sbjct: 356 ISHRGDP----ESIKISNILEK 373
Score = 31.6 bits (70), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 96 NPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQ 155
NP SL I K +K+ Y T E + NLM N + + D +++K+ ++++
Sbjct: 321 NPISLQDINKKVKTRRYKTFQEFQNDFNLMLTNFRISHRGDP----ESIKISNILEKTFT 376
Query: 156 EFSLNELT 163
+ EL+
Sbjct: 377 SLARFELS 384
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQ 86
PDY+ +IK+P L TI L + YST+ + ++ LMFENA +N S +++ A L
Sbjct: 553 PDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADVRLMFENALTYNADSSPVWKHAKTLL 612
Query: 87 KLMQRKVQEN 96
+K +N
Sbjct: 613 NAFDQKFLQN 622
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 93 VQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKL-----Q 147
V ++P L TI L + YST+ + ++ LMFENA +N S +++ A L Q
Sbjct: 558 VIKHPMDLGTIKGKLDNNGYSTIKDFAADVRLMFENALTYNADSSPVWKHAKTLLNAFDQ 617
Query: 148 KLMQ 151
K +Q
Sbjct: 618 KFLQ 621
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 50.8 bits (120), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQ 86
PDY+ I+KNP L TI + L +G Y + ++ LMF NA +N SR+Y+ KL
Sbjct: 1123 PDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLA 1182
Query: 87 KLMQ---------------RKVQENPRSLLTIGKTL 107
++ + RK + +P++L GK L
Sbjct: 1183 EVFEQEIDPVMQSLGYCCGRKYEFSPQTLCCYGKQL 1218
Score = 37.7 bits (86), Expect = 0.084, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 93 VQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQR 152
+ +NP L TI + L +G Y + ++ LMF NA +N SR+Y+ KL ++ ++
Sbjct: 1128 IVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQ 1187
Query: 153 KV 154
++
Sbjct: 1188 EI 1189
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1
Length = 2442
Score = 50.8 bits (120), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQ 86
PDY+ I+KNP L TI + L +G Y + ++ LMF NA +N SR+Y+ KL
Sbjct: 1124 PDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLA 1183
Query: 87 KLMQ---------------RKVQENPRSLLTIGKTL 107
++ + RK + +P++L GK L
Sbjct: 1184 EVFEQEIDPVMQSLGYCCGRKYEFSPQTLCCYGKQL 1219
Score = 37.7 bits (86), Expect = 0.085, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 93 VQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQR 152
+ +NP L TI + L +G Y + ++ LMF NA +N SR+Y+ KL ++ ++
Sbjct: 1129 IVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQ 1188
Query: 153 KV 154
++
Sbjct: 1189 EI 1190
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 21 PAKRYNPDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYR 80
P K+ PDY I+KNP L TI K L S YS E ++NLMF N +N +S +
Sbjct: 115 PIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFSNCFLYNGTESPVGS 174
Query: 81 DAVKLQKLMQRKVQENP 97
LQ++ +R++++ P
Sbjct: 175 MGKALQEVFERQLKQLP 191
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQ 86
PDY+ +IK P L TI L YSTL E ++ LMF N +NP + ++ +L+
Sbjct: 291 PDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLE 350
Query: 87 KLMQRKVQENPR 98
+ + K + P+
Sbjct: 351 NVFKEKWEARPK 362
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 93 VQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQR 152
+ +NP L TI K L S YS E ++NLMF N +N +S + LQ++ +R
Sbjct: 126 IVKNPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFER 185
Query: 153 KVQEF 157
++++
Sbjct: 186 QLKQL 190
>sp|Q4R8Y1|BRDT_MACFA Bromodomain testis-specific protein OS=Macaca fascicularis GN=BRDT
PE=2 SV=3
Length = 947
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQ 86
PDYY IIKNP L TI K L++ +Y +E + N MF N +N + A L+
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 87 KLMQRKVQENPRSLLTIG 104
KL +K+ + P+ +G
Sbjct: 124 KLFVQKLSQMPQEEQVVG 141
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 25 YNP---------DYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPAD 75
YNP +YY I+KNP L TI + + + Y + ++ LMF N K+NP D
Sbjct: 296 YNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPD 355
Query: 76 SRLYRDAVKLQKLMQ 90
+ A LQ + +
Sbjct: 356 HEVVTMARMLQDVFE 370
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 81 DAVKLQKLMQRKVQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLY 140
DAVKL+ + +NP L TI K L++ +Y +E + N MF N +N +
Sbjct: 57 DAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIV 116
Query: 141 RDAVKLQKLMQRKVQEFSLNE 161
A L+KL +K+ + E
Sbjct: 117 LMAQALEKLFVQKLSQMPQEE 137
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 27 PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQ 86
PDY+ I+KNP L TI + L +G Y + ++ LMF NA +N SR+Y+ KL
Sbjct: 1124 PDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLA 1183
Query: 87 KLMQ---------------RKVQENPRSLLTIGKTL 107
++ + RK + +P++L GK L
Sbjct: 1184 EVFEQEIDPVMQSLGYCCGRKYEFSPQTLCCYGKQL 1219
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 13/141 (9%)
Query: 93 VQENPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQR 152
+ +NP L TI + L +G Y + ++ LMF NA +N SR+Y+ KL ++ ++
Sbjct: 1129 IVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQ 1188
Query: 153 KVQEFSLNELTGELSLMFENAKKFNPADLRLY--------RDAVKLQKLMQRKVQEVMIL 204
++ + + L +F+P L Y RDA + E
Sbjct: 1189 EI-----DPVMQSLGYCCGRKYEFSPQTLCCYGKQLCTIPRDAAYYSYQNRYHFCEKCFT 1243
Query: 205 DIECQVYLISDELTHYQVVLT 225
+I+ + + D+ + Q ++
Sbjct: 1244 EIQGENVTLGDDPSQPQTTIS 1264
>sp|Q9JHD1|KAT2B_MOUSE Histone acetyltransferase KAT2B OS=Mus musculus GN=Kat2b PE=1 SV=2
Length = 813
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 16 PFLKLPAKRYN-PDYYRIIKNPRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPA 74
PF++ P KR P YY +I+ P L T+ + L++ +Y + +L +F N K++NP
Sbjct: 728 PFME-PVKRTEAPGYYEVIRFPMDLKTMSERLRNRYYVSKKLFMADLQRVFTNCKEYNPP 786
Query: 75 DSRLYRDAVKLQKLMQRKVQE 95
+S Y+ A L+K K++E
Sbjct: 787 ESEYYKCASILEKFFFSKIKE 807
Score = 37.7 bits (86), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 97 PRSLLTIGKTLKSGHYSTLNELTGELNLMFENAKKFNPADSRLYRDAVKLQKLMQRKVQE 156
P L T+ + L++ +Y + +L +F N K++NP +S Y+ A L+K K++E
Sbjct: 748 PMDLKTMSERLRNRYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCASILEKFFFSKIKE 807
Query: 157 FSL 159
L
Sbjct: 808 AGL 810
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 164 GELSLMFENAKKFNPADLRLYRDAVKLQKLMQRKVQEVMILD 205
+L +F N K++NP + Y+ A L+K K++E ++D
Sbjct: 771 ADLQRVFTNCKEYNPPESEYYKCASILEKFFFSKIKEAGLID 812
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,729,888
Number of Sequences: 539616
Number of extensions: 3434352
Number of successful extensions: 10541
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 9999
Number of HSP's gapped (non-prelim): 567
length of query: 256
length of database: 191,569,459
effective HSP length: 115
effective length of query: 141
effective length of database: 129,513,619
effective search space: 18261420279
effective search space used: 18261420279
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)