BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12253
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UK39|NOCT_HUMAN Nocturnin OS=Homo sapiens GN=CCRN4L PE=2 SV=2
Length = 431
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 90/161 (55%), Gaps = 27/161 (16%)
Query: 13 QVAVLLVLRNKKTQEEICIATTHLKARNGA----------LLSTLRN------------- 49
QVA+ L K++ + CIA THLKAR G LL L+N
Sbjct: 264 QVAIAQTLECKESGRQFCIAVTHLKARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCG 323
Query: 50 --EQEPTEPIYNTVMNHETLGLTSAYRHRTANNQ-EPQYTTWKIREEGEVCHTIDYVFYS 106
EPTE +Y + +L L SAY+ +A+ Q EP YTTWKIR GE HT+DY++YS
Sbjct: 324 DFNAEPTEEVYKHFAS-SSLNLNSAYKLLSADGQSEPPYTTWKIRTSGECRHTLDYIWYS 382
Query: 107 QDKFDVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTL 147
+ +V + LD+ + EQIG +R+PS YPSDH SLVCD +
Sbjct: 383 KHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423
>sp|P79942|NOCT_XENLA Nocturnin OS=Xenopus laevis GN=ccrn4l PE=2 SV=1
Length = 388
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 89/163 (54%), Gaps = 27/163 (16%)
Query: 13 QVAVLLVLRNKKTQEEICIATTHLKARNGA----------LLSTLRN------------- 49
QVA+ L+ +T ++C A THLKAR G LL L +
Sbjct: 221 QVAIAETLQCCETGRQLCFAVTHLKARTGWERFRLAQGSDLLDNLESITQGATVPLIICG 280
Query: 50 --EQEPTEPIYNTVMNHETLGLTSAYRHRTANNQ-EPQYTTWKIREEGEVCHTIDYVFYS 106
+PTE +Y + +L L SAY+ + + + EP YTTWKIR GE CHT+DY++YS
Sbjct: 281 DFNADPTEEVYKRFAS-SSLNLNSAYKLLSEDGESEPPYTTWKIRTTGESCHTLDYIWYS 339
Query: 107 QDKFDVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK 149
Q V A L +P+ EQIG +R+PS YPSDH SLVCD + +
Sbjct: 340 QHALRVNAALGLPTEEQIGPNRLPSFNYPSDHLSLVCDFSFNE 382
>sp|O35710|NOCT_MOUSE Nocturnin OS=Mus musculus GN=Ccrn4l PE=2 SV=3
Length = 429
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 89/163 (54%), Gaps = 27/163 (16%)
Query: 13 QVAVLLVLRNKKTQEEICIATTHLKARNGA----------LLSTLRN------------- 49
QVA+ L K++ + CIA THLKAR G LL L+N
Sbjct: 262 QVAIAQTLECKESGRQFCIAVTHLKARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCG 321
Query: 50 --EQEPTEPIYNTVMNHETLGLTSAYRHRTANNQ-EPQYTTWKIREEGEVCHTIDYVFYS 106
EPTE +Y + +L L SAY+ + + Q EP YTTWKIR GE HT+DY++YS
Sbjct: 322 DFNAEPTEEVYKHFAS-SSLNLNSAYKLLSPDGQSEPPYTTWKIRTSGECRHTLDYIWYS 380
Query: 107 QDKFDVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK 149
+ V + LD+ + EQIG +R+PS YPSDH SLVCD + +
Sbjct: 381 RHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSFNE 423
>sp|Q6L8Q7|PDE12_HUMAN 2',5'-phosphodiesterase 12 OS=Homo sapiens GN=PDE12 PE=1 SV=2
Length = 609
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 52/189 (27%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHL--KARNGAL--------LSTLRN----- 49
+++R + QV+VL K + + IC+A THL + G + L+ +R+
Sbjct: 428 VLQRSSVLQVSVLQ--STKDSSKRICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDL 485
Query: 50 ------------EQEPTEPIYNTVMN------HE-----------TLGLTSAYRHRTANN 80
P+ +Y+ V+N HE + LT ++ ++A
Sbjct: 486 YPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEERCNMSLTHFFKLKSACG 545
Query: 81 QEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDR-IPSLRYPSDHF 139
EP YT + G +DY+F + +VE V+ +PS E++ + +PS+ +PSDH
Sbjct: 546 -EPAYTNYV----GGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVSHPSDHI 600
Query: 140 SLVCDLTLK 148
+LVCDL K
Sbjct: 601 ALVCDLKWK 609
>sp|Q6AXQ5|PDE12_RAT 2',5'-phosphodiesterase 12 OS=Rattus norvegicus GN=Pde12 PE=2 SV=1
Length = 608
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 52/189 (27%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHL--KARNG--------ALLSTLRN----- 49
+++R + Q++VL + ++IC+A THL + G A L +R+
Sbjct: 427 VLQRSSVLQISVLQ--STTDSSKKICVANTHLYWHPKGGYIRLIQMAAALVHIRHVSCDL 484
Query: 50 ------------EQEPTEPIYNTVMN------HE-----------TLGLTSAYRHRTANN 80
P+ +Y+ V+N HE + LT ++ ++A
Sbjct: 485 YPGIPVIFCGDFNSTPSTGMYHFVINGSVPEDHEDWASNGEEERCGMSLTHCFKLKSACG 544
Query: 81 QEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDR-IPSLRYPSDHF 139
EP YT + G +DY+F + +VE V+ +PS E++ + +PS+ +PSDH
Sbjct: 545 -EPAYTNYV----GGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVSHPSDHI 599
Query: 140 SLVCDLTLK 148
+LVCDL K
Sbjct: 600 ALVCDLKWK 608
>sp|Q08DF7|PDE12_BOVIN 2',5'-phosphodiesterase 12 OS=Bos taurus GN=PDE12 PE=1 SV=1
Length = 609
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 52/189 (27%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHL--KARNGAL--------LSTLRN----- 49
+++R + QV+VL K + ++IC+A THL + G + L+ +R+
Sbjct: 428 VLQRSSVVQVSVLQ--STKDSSKKICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDL 485
Query: 50 ------------EQEPTEPIYNTVMN------HE-----------TLGLTSAYRHRTANN 80
P+ +Y+ V+N HE + L+ ++ ++A
Sbjct: 486 YPGIPVIFCGDFNSTPSTGMYHFVINGSIAEDHEDWTSNGEEERCNMSLSHFFKLKSACG 545
Query: 81 QEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDR-IPSLRYPSDHF 139
EP YT + G +DY+F +VE V+ +PS E++ + +PS+ +PSDH
Sbjct: 546 -EPAYTNYV----GGFHGCLDYIFIDLHALEVEQVIPLPSHEEVTTHQALPSVSHPSDHI 600
Query: 140 SLVCDLTLK 148
+LVCDL K
Sbjct: 601 ALVCDLKWK 609
>sp|Q3TIU4|PDE12_MOUSE 2',5'-phosphodiesterase 12 OS=Mus musculus GN=Pde12 PE=2 SV=2
Length = 608
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 66 TLGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIG 125
++ L+ ++ ++A EP YT + G +DY+F + +VE V+ +PS E++
Sbjct: 530 SMPLSHCFKLKSACG-EPAYTNYV----GGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVT 584
Query: 126 RDR-IPSLRYPSDHFSLVCDLTLK 148
+ +PS+ +PSDH +LVCDL K
Sbjct: 585 THQALPSVSHPSDHIALVCDLKWK 608
>sp|Q5XH73|CN6LB_XENLA CCR4-NOT transcription complex subunit 6-like-B OS=Xenopus laevis
GN=cnot6l-b PE=2 SV=1
Length = 550
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 69 LTSAYRHRTA--NNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGR 126
+T ++ R+A NN P YT + +G IDY+FYS+ DV VL + +
Sbjct: 455 ITHGFQLRSAYENNLMP-YTNYTFDFKG----VIDYIFYSKTHIDVLGVLGPLDPQWMMD 509
Query: 127 DRI---PSLRYPSDHFSLVCDLTL 147
+ I P PSDHFSL+ L L
Sbjct: 510 NNIAGCPHPHIPSDHFSLLTQLEL 533
>sp|Q0WKY2|CCR4E_ARATH Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis
thaliana GN=CCR4-5 PE=2 SV=2
Length = 454
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 20 LRNKKTQEEICIATTHLKARNGALLSTLRNEQEPTEPIYNTVMNHETLGLTSAYRHRTAN 79
L N+ +QEE+ +AT QE T + +N G+ YR R
Sbjct: 342 LLNEWSQEELQLAT---------------GGQETTHVQHQLKLNSAYSGVPGTYRTRDQR 386
Query: 80 NQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDRIPSLRYPSDHF 139
EP TT+ R G T+DY++++++ V + +P+ +PS + SDH
Sbjct: 387 G-EPLATTYHSRFLG----TVDYIWHTKELVPVRVLETLPADVLRRTGGLPSENWGSDHL 441
Query: 140 SLVCDLTL 147
++ C+L
Sbjct: 442 AIACELGF 449
>sp|Q6IR85|CN6LA_XENLA CCR4-NOT transcription complex subunit 6-like-A OS=Xenopus laevis
GN=cnot6l-a PE=2 SV=1
Length = 550
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 69 LTSAYRHRTA--NNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGR 126
+T ++ R+A NN P YT + +G IDY+FYS+ DV +L + +
Sbjct: 455 ITHGFQLRSAYENNLMP-YTNYTFDFKG----VIDYIFYSKTHMDVLGILGPLDPQWMMD 509
Query: 127 DRI---PSLRYPSDHFSLVCDLTL 147
+ I P PSDHFSL+ L L
Sbjct: 510 NNITGCPHPHIPSDHFSLLTQLEL 533
>sp|Q6CEJ6|CCR4_YARLI Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CCR4
PE=3 SV=1
Length = 705
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Query: 62 MNHETLGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVL----- 116
MNH L SAY +N E +T + IDYV+YS + V +L
Sbjct: 600 MNH-GFTLKSAY----SNIGELAFTNYTPN----FVDVIDYVWYSSNALSVRGLLGGIDP 650
Query: 117 DMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK 149
D S +G PS+ YPSDH SL+ + + KK
Sbjct: 651 DYTS-NMVG---FPSVHYPSDHISLLAEFSFKK 679
>sp|Q1EA11|CCR4_COCIM Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Coccidioides immitis (strain RS) GN=CCR4 PE=3 SV=2
Length = 758
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 100 IDYVFYSQDKFDVEAVLDMPSGEQIGR-DRIPSLRYPSDHFSLVCDLTLK 148
IDY++YS + V A+L E + R P+ +PSDH +L+ + ++K
Sbjct: 690 IDYIWYSSNTLQVTALLGEVDKEYLKRVPGFPNYHFPSDHLALMAEFSVK 739
>sp|Q9C2R2|CCR4_NEUCR Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=ccr-4 PE=3 SV=2
Length = 793
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 67 LGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGR 126
+ SAY H E +T + + EV IDY++YS + +V +L P + R
Sbjct: 677 FSMRSAYVHLNGTPDELSFTNY-VPGFQEV---IDYIWYSTNTLEVVELLGPPDQNHLKR 732
Query: 127 -DRIPSLRYPSDHFSLVCDLTLKK 149
P+ +P+DH ++ + +K+
Sbjct: 733 VPGFPNYHFPADHIQIMAEFVIKQ 756
>sp|A1CW67|CCR4_NEOFI Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
FGSC A1164 / NRRL 181) GN=ccr4 PE=3 SV=1
Length = 750
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 100 IDYVFYSQDKFDVEAVLDMPSGEQIGR-DRIPSLRYPSDHFSLVCDLTLK 148
+DY++YS + V A+L + + R P+ +PSDH +L+ + T+K
Sbjct: 685 LDYIWYSSNSLHVSALLGEVDKDYLQRVPGFPNYHFPSDHIALLAEFTVK 734
>sp|Q4WQG5|CCR4_ASPFU Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=ccr4 PE=3 SV=1
Length = 696
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 100 IDYVFYSQDKFDVEAVLDMPSGEQIGR-DRIPSLRYPSDHFSLVCDLTLK 148
+DY++YS + V A+L + + R P+ +PSDH +L+ + T+K
Sbjct: 631 LDYIWYSSNSLHVSALLGEVDKDYLQRVPGFPNYHFPSDHIALLAEFTVK 680
>sp|Q96LI5|CNO6L_HUMAN CCR4-NOT transcription complex subunit 6-like OS=Homo sapiens
GN=CNOT6L PE=1 SV=2
Length = 555
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 69 LTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDR 128
L SAY NN P YT + +G IDY+FYS+ +V VL + + +
Sbjct: 466 LKSAYE----NNLMP-YTNYTFDFKG----VIDYIFYSKTHMNVLGVLGPLDPQWLVENN 516
Query: 129 I---PSLRYPSDHFSLV 142
I P PSDHFSL+
Sbjct: 517 ITGCPHPHIPSDHFSLL 533
>sp|A2Q9L0|CCR4_ASPNC Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=ccr4 PE=3 SV=1
Length = 656
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 63 NHETLGLTSAYRHRTANNQ--EPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPS 120
N +G+T ++ ++A N E +T + + +DY++Y+ + V A+L
Sbjct: 556 NLSRVGMTHPFKLKSAYNSIGELSFTNYTP----DFKDILDYIWYTSNTLHVSALLGEVD 611
Query: 121 GEQIGR-DRIPSLRYPSDHFSLVCDLTLK 148
E + + P+ +PSDH +L + T+K
Sbjct: 612 KEYLQKVPGFPNFHFPSDHVALFAEFTVK 640
>sp|Q03264|NGL2_YEAST RNA exonuclease NGL2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NGL2 PE=1 SV=1
Length = 515
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 25/88 (28%)
Query: 82 EPQYTTWKIREEGEVCHTIDYVFY--------------------SQDKFDVEAVLDMPSG 121
EP+ + W G +DY+FY ++K L MP G
Sbjct: 431 EPEISNWANTWRG----LLDYLFYVKKWDPQSNCQEVETLGDFEKENKVKCRGFLRMPPG 486
Query: 122 EQIGRDRIPSL-RYPSDHFSLVCDLTLK 148
++ + P + Y SDH S+VCDL L+
Sbjct: 487 NEMTKHGQPHVGEYASDHLSMVCDLELQ 514
>sp|Q8VEG6|CNO6L_MOUSE CCR4-NOT transcription complex subunit 6-like OS=Mus musculus
GN=Cnot6l PE=1 SV=2
Length = 555
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 69 LTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDR 128
L SAY NN P YT + +G IDY+FYS+ +V VL + + +
Sbjct: 466 LKSAYE----NNLMP-YTNYTFDFKG----VIDYIFYSKTHMNVLGVLGPLDPQWLVENN 516
Query: 129 I---PSLRYPSDHFSLV 142
I P PSDHFSL+
Sbjct: 517 ITGCPHPHIPSDHFSLL 533
>sp|Q5BJ41|CNOT6_XENLA CCR4-NOT transcription complex subunit 6 OS=Xenopus laevis GN=cnot6
PE=2 SV=1
Length = 552
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 69 LTSAYRHRTA-NNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRD 127
+T ++ ++A N YT + +G IDY+FYS+ + + A+L + +
Sbjct: 457 ITHGFKLKSAYENGLMPYTNYTFDFKG----IIDYIFYSKPQLNTLAILGPLDHHWLVEN 512
Query: 128 RI---PSLRYPSDHFSLVCDLTL 147
I P PSDHFSL L L
Sbjct: 513 NISGCPHPLIPSDHFSLFAQLEL 535
>sp|Q6AXU9|CNOT6_RAT CCR4-NOT transcription complex subunit 6 OS=Rattus norvegicus
GN=Cnot6 PE=2 SV=1
Length = 557
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 69 LTSAYRHRTA-NNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRD 127
+T ++ ++A N YT + +G IDY+FYS+ + + A+L + +
Sbjct: 462 ITHGFKLKSAYENGLMPYTNYTFDFKG----IIDYIFYSKPQLNTLAILGPLDHHWLVEN 517
Query: 128 RI---PSLRYPSDHFSLVCDLTL 147
I P PSDHFSL L L
Sbjct: 518 NISGCPHPLIPSDHFSLFAQLEL 540
>sp|Q8K3P5|CNOT6_MOUSE CCR4-NOT transcription complex subunit 6 OS=Mus musculus GN=Cnot6
PE=1 SV=2
Length = 557
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 69 LTSAYRHRTA-NNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRD 127
+T ++ ++A N YT + +G IDY+FYS+ + + A+L + +
Sbjct: 462 ITHGFKLKSAYENGLMPYTNYTFDFKG----IIDYIFYSKPQLNTLAILGPLDHHWLVEN 517
Query: 128 RI---PSLRYPSDHFSLVCDLTL 147
I P PSDHFSL L L
Sbjct: 518 NISGCPHPLIPSDHFSLFAQLEL 540
>sp|A1CIJ6|CCR4_ASPCL Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 /
DSM 816 / NCTC 3887 / NRRL 1) GN=ccr4 PE=3 SV=1
Length = 667
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 100 IDYVFYSQDKFDVEAVLDMPSGEQIGR-DRIPSLRYPSDHFSLVCDLTLK 148
+DY++YS + V A+L + + + P+ +PSDH +L + T+K
Sbjct: 602 LDYIWYSSNSLHVSALLGEVDKDYLQKVPGFPNYHFPSDHIALFAEFTVK 651
>sp|Q9ET55|NOCT_RAT Nocturnin (Fragment) OS=Rattus norvegicus GN=Ccrn4l PE=2 SV=1
Length = 253
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 13 QVAVLLVLRNKKTQEEICIATTHLKARNG 41
QVA+ L K++ + CIA THLKAR G
Sbjct: 188 QVAIAQTLECKESGRQFCIAVTHLKARTG 216
>sp|Q4P9T3|CCR4_USTMA Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CCR4 PE=3
SV=1
Length = 670
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 63 NHETLGLTSAYRHRTANN--QEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPS 120
N+ GL +Y+ ++ E +T + EG IDY+FY+++ V VL
Sbjct: 557 NYTAQGLQHSYKLESSYVPIGELPFTNYTPGYEG----AIDYIFYTKNTLSVTGVLGEID 612
Query: 121 GEQIGR-DRIPSLRYPSDHFSLVCDLTLKK 149
+ + + P+ +PSDH ++ + +K+
Sbjct: 613 KQYLSKVVGFPNAHFPSDHICIMSEFNVKR 642
>sp|Q5RGT6|ANGE2_DANRE Protein angel homolog 2 OS=Danio rerio GN=angel2 PE=2 SV=1
Length = 569
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 16/76 (21%)
Query: 45 STLRN-EQEPTEPIYNTVMNHETLGLTSAYRHRTANNQEPQYTTWKIREEGEVCH----- 98
S LR+ EQ E + H L LTSAY H + +P+ TT CH
Sbjct: 448 SELRDLEQTERESFTEASIEH-CLRLTSAYSHHLKESGQPEITT---------CHSRTAI 497
Query: 99 TIDYVFYSQDKFDVEA 114
T+DY+FYS DV A
Sbjct: 498 TVDYIFYSAALGDVMA 513
>sp|Q5B778|CCR4_EMENI Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=ccr4 PE=3 SV=1
Length = 675
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 100 IDYVFYSQDKFDVEAVLDMPSGEQIGR-DRIPSLRYPSDHFSLVCDLTLK 148
+DY++YS + V +L + + R P+ +PSDH +L+ + ++K
Sbjct: 610 LDYIWYSSNTVHVSGLLGEVDKDYLQRVPGFPNYHFPSDHIALLAEFSVK 659
>sp|Q3T1H5|TYDP2_RAT Tyrosyl-DNA phosphodiesterase 2 OS=Rattus norvegicus GN=Tdp2 PE=2
SV=1
Length = 366
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 98 HTIDYVFYSQDKFDVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTL 147
H D +F+ + E L S + IG +R+ R+PSDH+ L+C L +
Sbjct: 319 HRFDRIFFRAE----EGHLIPQSLDLIGLERLDCGRFPSDHWGLLCTLNV 364
>sp|A2BHJ4|CNO6L_DANRE CCR4-NOT transcription complex subunit 6-like OS=Danio rerio
GN=cnot6l PE=2 SV=1
Length = 559
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 99 TIDYVFYSQDKFDVEAVLDMPSGEQIGRDRI---PSLRYPSDHFSLVCDL 145
IDY+F+S+ V VL + + + I P PSDHFSL+ L
Sbjct: 482 VIDYIFFSKTHMSVLGVLGPLETQWLKDNNITGCPHPHIPSDHFSLLAQL 531
>sp|Q9ULM6|CNOT6_HUMAN CCR4-NOT transcription complex subunit 6 OS=Homo sapiens GN=CNOT6
PE=1 SV=2
Length = 557
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 85 YTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDRI---PSLRYPSDHFSL 141
YT + +G IDY+FYS+ + + +L + + I P PSDHFSL
Sbjct: 479 YTNYTFDFKG----IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSL 534
Query: 142 VCDLTL 147
L L
Sbjct: 535 FAQLEL 540
>sp|C4V7I7|CCR4_NOSCE Probable glucose-repressible alcohol dehydrogenase transcriptional
effector homolog OS=Nosema ceranae (strain BRL01)
GN=CCR4 PE=3 SV=1
Length = 476
Score = 32.3 bits (72), Expect = 0.95, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 100 IDYVFYSQDKFDVEAVLDMPSGEQIGRD-RIPSLRYPSDHFSLVCDLTLKK 149
ID++FYS D ++ ++L E + +P++ +PSDH L LKK
Sbjct: 427 IDFIFYS-DTLELRSILSTIENEYCDQVVGLPNIHFPSDHIFLASKFKLKK 476
>sp|Q0CT27|CCR4_ASPTN Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
GN=ccr4 PE=3 SV=1
Length = 677
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 100 IDYVFYSQDKFDVEAVLDMPSGEQIGR-DRIPSLRYPSDHFSLVCDLTLK 148
+DY++Y+ + V A+L + + + P+ +PSDH +L + ++K
Sbjct: 612 LDYIWYTSNTLHVSALLGEVDKDYLQKVPGFPNFHFPSDHIALFAEFSVK 661
>sp|Q6BMM5|CCR4_DEBHA Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=CCR4 PE=3 SV=2
Length = 831
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 99 TIDYVFYSQDKFDVEAVL----DMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK 149
IDY++YS V+ +L + S IG P+ +PSDH LV +KK
Sbjct: 755 AIDYIWYSTPTLQVKGLLGKIDEEYSSHCIG---FPNAHFPSDHIPLVTKFQIKK 806
>sp|A6H7I3|ANGE2_BOVIN Protein angel homolog 2 OS=Bos taurus GN=ANGEL2 PE=2 SV=1
Length = 544
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 17/61 (27%)
Query: 67 LGLTSAYRHRTANNQEPQYTTWKIREEGEVCH-----TIDYVFYSQDKFDVEAVLDMPSG 121
L+S Y H + P+ TT CH T+DY+FYS +K E V + P
Sbjct: 449 FSLSSVYSHYLPDTGIPEVTT---------CHSRSAVTVDYIFYSAEK---EGVAEQPGA 496
Query: 122 E 122
E
Sbjct: 497 E 497
>sp|Q5A761|CCR4_CANAL Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=CCR4 PE=3 SV=1
Length = 787
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 100 IDYVFYSQDKFDVEAVLDMPSGEQIGRD-RIPSLRYPSDHFSLVCDLTLKK 149
IDY++YS V+ +L E P +PSDH ++ LKK
Sbjct: 730 IDYIWYSTPTLQVKGLLGRVDEEYTSHSIGFPDANFPSDHVPILAKFQLKK 780
>sp|Q9JJX7|TYDP2_MOUSE Tyrosyl-DNA phosphodiesterase 2 OS=Mus musculus GN=Tdp2 PE=1 SV=1
Length = 370
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 98 HTIDYVFYSQDKFDVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTL 147
H D +F+ + E L S + +G +++ R+PSDH+ L+C L +
Sbjct: 323 HRFDRIFFRAE----EGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNV 368
>sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2 OS=Arabidopsis
thaliana GN=CCR4-2 PE=2 SV=2
Length = 603
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 67 LGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGR 126
LGL R N EP +T G T DY+FY+ D VE++L++ + + +
Sbjct: 519 LGLEQHRRRIDLNTNEPLFTNCTRDFIG----THDYIFYTADTLMVESLLELLDEDGLRK 574
Query: 127 D-RIPSLRYPSDHFSLVCDL 145
D +PS + S+H +L+ +
Sbjct: 575 DTALPSPEWSSNHIALLAEF 594
>sp|Q5VTE6|ANGE2_HUMAN Protein angel homolog 2 OS=Homo sapiens GN=ANGEL2 PE=2 SV=1
Length = 544
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 14/53 (26%)
Query: 67 LGLTSAYRHRTANNQEPQYTTWKIREEGEVCH-----TIDYVFYSQDKFDVEA 114
L+S Y H + P+ TT CH T+DY+FYS +K DV
Sbjct: 449 FSLSSVYSHYFPDTGIPEVTT---------CHSRSAITVDYIFYSAEKEDVAG 492
>sp|B2RYM0|ANGE1_RAT Protein angel homolog 1 OS=Rattus norvegicus GN=Angel1 PE=2 SV=2
Length = 667
Score = 30.0 bits (66), Expect = 5.3, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 22/117 (18%)
Query: 49 NEQEPTEPIYNTVMNHETLGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQD 108
+E EP P + H L LTS Y H + P+ TT + + T+DY+F+S +
Sbjct: 552 SELEPVFPRTIGTIQH-CLHLTSVYTHFLPQHGRPEVTTMPL----GLGMTVDYIFFSAE 606
Query: 109 KFDVEAVLD---------------MPSGEQI--GRDRIPSLRYPSDHFSLVCDLTLK 148
+ E D E+I + +P+ Y SDH L+ ++
Sbjct: 607 SCENENRSDHRLDRDGTLKLLGRLSLLSEEILWAANGLPNPFYSSDHLCLLASFGME 663
>sp|Q8W0Z9|CCR4A_ARATH Carbon catabolite repressor protein 4 homolog 1 OS=Arabidopsis
thaliana GN=CCR4-1 PE=2 SV=1
Length = 602
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 99 TIDYVFYSQDKFDVEAVLDMPSGEQIGRD-RIPSLRYPSDHFSLVCDL 145
T+DY+FY+ D VE++L++ E + +D +PS + SDH +L+ +
Sbjct: 543 TLDYIFYTADTLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 590
>sp|Q9Z2V6|HDAC5_MOUSE Histone deacetylase 5 OS=Mus musculus GN=Hdac5 PE=1 SV=2
Length = 1113
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 17 LLVLRNKKTQEEICIATTHLKARNGALLSTLRNEQEPT 54
LL+LRNK+ +E IA+T +K R L L +EPT
Sbjct: 155 LLILRNKEKSKESAIASTEVKLRLQEFL--LSKSKEPT 190
>sp|Q5R902|HDAC5_PONAB Histone deacetylase 5 OS=Pongo abelii GN=HDAC5 PE=2 SV=1
Length = 1122
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 17 LLVLRNKKTQEEICIATTHLKARNGALLSTLRNEQEPT 54
LL+LRNK+ +E IA+T +K R L L +EPT
Sbjct: 164 LLILRNKEKSKESAIASTEVKLRLQEFL--LSKSKEPT 199
>sp|Q80ZH1|HDAC5_CRIGR Histone deacetylase 5 OS=Cricetulus griseus GN=HDAC5 PE=2 SV=1
Length = 1111
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 17 LLVLRNKKTQEEICIATTHLKARNGALLSTLRNEQEPT 54
LL+LRNK+ +E IA+T +K R L L +EPT
Sbjct: 155 LLILRNKEKSKESAIASTEVKLRLQEFL--LSKSKEPT 190
>sp|Q2UUI3|CCR4_ASPOR Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=ccr4 PE=3 SV=1
Length = 746
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 63 NHETLGLTSAYRHRTANNQ--EPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPS 120
N +G+T ++ ++A N E +T + + +DY++++ + V A+L
Sbjct: 646 NLSRVGMTHPFKLKSAYNSIGELSFTNYTP----DFKDILDYIWFTSNTLHVSALLGEVD 701
Query: 121 GEQIGR-DRIPSLRYPSDHFSLVCDL 145
+ + + P+ +PSDH +L +
Sbjct: 702 KDYLQKVPGFPNFHFPSDHIALFAEF 727
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,885,760
Number of Sequences: 539616
Number of extensions: 2138020
Number of successful extensions: 4088
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 4042
Number of HSP's gapped (non-prelim): 61
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)