Your job contains 1 sequence.
>psy12253
MRIIIMKRGAPRQVAVLLVLRNKKTQEEICIATTHLKARNGALLSTLRNEQEPTEPIYNT
VMNHETLGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPS
GEQIGRDRIPSLRYPSDHFSLVCDLTLKK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12253
(149 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0261808 - symbol:cu "curled" species:7227 "Drosoph... 268 4.2e-33 2
ZFIN|ZDB-GENE-050208-306 - symbol:ccrn4la "CCR4 carbon ca... 268 1.3e-29 2
UNIPROTKB|F1PFN1 - symbol:CCRN4L "Uncharacterized protein... 255 1.2e-28 2
UNIPROTKB|A2VE74 - symbol:CCRN4L "Uncharacterized protein... 259 3.8e-28 2
UNIPROTKB|F1NVT2 - symbol:CCRN4L "Uncharacterized protein... 253 5.2e-28 2
UNIPROTKB|I3LN01 - symbol:CCRN4L "Uncharacterized protein... 256 2.2e-27 2
UNIPROTKB|Q9UK39 - symbol:CCRN4L "Nocturnin" species:9606... 254 2.7e-27 2
MGI|MGI:109382 - symbol:Ccrn4l "CCR4 carbon catabolite re... 248 1.3e-26 2
UNIPROTKB|F1SGK9 - symbol:PDE12 "Uncharacterized protein"... 127 1.0e-10 2
UNIPROTKB|Q6L8Q7 - symbol:PDE12 "2',5'-phosphodiesterase ... 127 1.3e-10 2
RGD|1310975 - symbol:Pde12 "phosphodiesterase 12" species... 129 3.3e-10 2
UNIPROTKB|F1NGS9 - symbol:PDE12 "Uncharacterized protein"... 129 3.5e-10 2
UNIPROTKB|Q08DF7 - symbol:PDE12 "2',5'-phosphodiesterase ... 121 5.6e-10 2
UNIPROTKB|E2R412 - symbol:PDE12 "Uncharacterized protein"... 123 5.8e-10 2
MGI|MGI:2443226 - symbol:Pde12 "phosphodiesterase 12" spe... 124 1.1e-09 2
ZFIN|ZDB-GENE-060519-25 - symbol:pde12 "phosphodiesterase... 117 4.8e-08 2
>FB|FBgn0261808 [details] [associations]
symbol:cu "curled" species:7227 "Drosophila melanogaster"
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0009416 "response to light stimulus"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0030014 "CCR4-NOT complex" evidence=IDA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
Pfam:PF03372 EMBL:AE014297 GO:GO:0005811 GO:GO:0009416
GO:GO:0045475 eggNOG:COG5239 GeneTree:ENSGT00550000074364
InterPro:IPR005135 SUPFAM:SSF56219 GO:GO:0030014 GO:GO:0000289
RefSeq:NP_001097746.1 UniGene:Dm.11906 ProteinModelPortal:A8JQX3
SMR:A8JQX3 STRING:A8JQX3 EnsemblMetazoa:FBtr0113219 GeneID:41339
KEGG:dme:Dmel_CG31299 UCSC:CG31299-RD CTD:41339 FlyBase:FBgn0261808
OrthoDB:EOG4CC2GK PhylomeDB:A8JQX3 GenomeRNAi:41339 NextBio:823348
Bgee:A8JQX3 Uniprot:A8JQX3
Length = 642
Score = 268 (99.4 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
Identities = 46/67 (68%), Positives = 55/67 (82%)
Query: 81 QEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDRIPSLRYPSDHFS 140
+EP YTTWKIREEGE CHTIDYVFY+ D+ ++ LD P+GEQIG++R PS +YPSDHFS
Sbjct: 543 REPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRTPSFQYPSDHFS 602
Query: 141 LVCDLTL 147
LVCD L
Sbjct: 603 LVCDFEL 609
Score = 126 (49.4 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 2 RIIIMKRGAPRQVAVLLVLRNKKTQEEICIATTHLKARNGALLSTLRNEQ 51
RI+ + R QVA+ LR + + E C+ATTHLKAR+GALL+ LRNEQ
Sbjct: 420 RILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNEQ 469
Score = 66 (28.3 bits), Expect = 8.1e-27, Sum P(2) = 8.1e-27
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 12 RQVAVLLVLRNKKTQEEICIATTHLKARNGALLSTLRNEQEPTEPIYNTVMNHETLGLTS 71
R A+L LRN++ ++ I A + LL EP EPIY T++ + L L S
Sbjct: 457 RHGALLAKLRNEQGRDLIRFVKQF--AGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGS 514
Query: 72 AYRHRTANNQE 82
AY + +E
Sbjct: 515 AYADVKLDREE 525
Score = 42 (19.8 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 43 LLSTLRNEQEPTEPIYNTVMNHETLGLTSAYRHR 76
L S P E Y +HE G + RHR
Sbjct: 59 LFSVTDEPPSPNEEDYKPPNHHEDDGKLAGERHR 92
Score = 36 (17.7 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 62 MNHETLGLTSAYRHR 76
M+ +T GL Y HR
Sbjct: 1 MDQKTTGLRENYGHR 15
>ZFIN|ZDB-GENE-050208-306 [details] [associations]
symbol:ccrn4la "CCR4 carbon catabolite repression
4-like a (S. cerevisiae)" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF03372 ZFIN:ZDB-GENE-050208-306 GeneTree:ENSGT00550000074364
InterPro:IPR005135 SUPFAM:SSF56219 EMBL:AL929007 IPI:IPI00900988
RefSeq:XP_700794.1 UniGene:Dr.91274 Ensembl:ENSDART00000113469
GeneID:572044 KEGG:dre:572044 CTD:572044 NextBio:20890814
Uniprot:E7F177
Length = 432
Score = 268 (99.4 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 51/99 (51%), Positives = 68/99 (68%)
Query: 52 EPTEPIYNTVMNHETLGLTSAYRHRTANNQ-EPQYTTWKIREEGEVCHTIDYVFYSQDKF 110
EP E +Y + +LGL S Y+ + + EP YT+WKIR GE C T+DY++YS+ F
Sbjct: 329 EPNEEVYRHFRS-SSLGLDSVYKCLSDDRTTEPPYTSWKIRPSGECCSTLDYIWYSEKAF 387
Query: 111 DVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK 149
+V+AVL +PS EQIG DR+PS YPSDH SLVCDL+ +
Sbjct: 388 EVDAVLRIPSEEQIGPDRLPSFHYPSDHLSLVCDLSFSQ 426
Score = 81 (33.6 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 13 QVAVLLVLRNKKTQEEICIATTHLKARNG 41
QVAV+ LR K T C+A THLKAR+G
Sbjct: 254 QVAVVATLRCKLTGRVFCVAVTHLKARSG 282
>UNIPROTKB|F1PFN1 [details] [associations]
symbol:CCRN4L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA] [GO:0000290 "deadenylation-dependent decapping
of nuclear-transcribed mRNA" evidence=IEA] Pfam:PF03372
GeneTree:ENSGT00550000074364 InterPro:IPR005135 SUPFAM:SSF56219
OMA:HPEYLVS EMBL:AAEX03011735 Ensembl:ENSCAFT00000005996
Uniprot:F1PFN1
Length = 365
Score = 255 (94.8 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 49/99 (49%), Positives = 67/99 (67%)
Query: 52 EPTEPIYNTVMNHETLGLTSAYRHRTANNQ-EPQYTTWKIREEGEVCHTIDYVFYSQDKF 110
EPTE +Y + +L L SAY+ +A+ Q EP YTTWKIR GE HT+DY++YS+
Sbjct: 262 EPTEEVYKHFAS-SSLNLNSAYKLLSADGQSEPPYTTWKIRTSGECRHTLDYIWYSKHAL 320
Query: 111 DVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK 149
V++ LD+ + EQIG +R+PS YPSDH SLVCD + +
Sbjct: 321 SVKSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSFNE 359
Score = 79 (32.9 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 13 QVAVLLVLRNKKTQEEICIATTHLKARNG 41
QVA++ L K++ + CIA THLKAR G
Sbjct: 198 QVAIVQTLECKESSRQFCIAVTHLKARTG 226
>UNIPROTKB|A2VE74 [details] [associations]
symbol:CCRN4L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] Pfam:PF03372 eggNOG:COG5239
GeneTree:ENSGT00550000074364 InterPro:IPR005135 SUPFAM:SSF56219
CTD:25819 HOGENOM:HOG000237357 HOVERGEN:HBG006512 OMA:HPEYLVS
OrthoDB:EOG4NZTTH EMBL:DAAA02044446 EMBL:BC133608 IPI:IPI00693881
RefSeq:NP_001075923.1 UniGene:Bt.27843 STRING:A2VE74
Ensembl:ENSBTAT00000007876 GeneID:540641 KEGG:bta:540641
InParanoid:A2VE74 NextBio:20878745 Uniprot:A2VE74
Length = 427
Score = 259 (96.2 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
Identities = 50/99 (50%), Positives = 66/99 (66%)
Query: 52 EPTEPIYNTVMNHETLGLTSAYRHRTANNQ-EPQYTTWKIREEGEVCHTIDYVFYSQDKF 110
EPTE +Y + +L L SAY+ +A+ Q EP YTTWKIR GE HT+DY++YS+
Sbjct: 328 EPTEEVYKHFAS-SSLNLNSAYKLLSADGQSEPPYTTWKIRTSGECRHTLDYIWYSRQAL 386
Query: 111 DVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK 149
V + LD+ + EQIG +R+PS YPSDH SLVCD T +
Sbjct: 387 SVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFTFNE 425
Score = 77 (32.2 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 13 QVAVLLVLRNKKTQEEICIATTHLKARNG 41
QVA+ L K++ + CIA THLKAR G
Sbjct: 264 QVAIAQTLECKESSRQFCIAVTHLKARTG 292
>UNIPROTKB|F1NVT2 [details] [associations]
symbol:CCRN4L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IEA] Pfam:PF03372
GeneTree:ENSGT00550000074364 InterPro:IPR005135 SUPFAM:SSF56219
OMA:HPEYLVS EMBL:AADN02016273 IPI:IPI00577593
Ensembl:ENSGALT00000015887 ArrayExpress:F1NVT2 Uniprot:F1NVT2
Length = 371
Score = 253 (94.1 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 49/99 (49%), Positives = 65/99 (65%)
Query: 52 EPTEPIYNTVMNHETLGLTSAYRHRTANNQ-EPQYTTWKIREEGEVCHTIDYVFYSQDKF 110
EPTE +Y N +L L SAY+ + + Q EP YTTWKIR GE HT+DY++YSQ
Sbjct: 268 EPTEEVYREFSN-SSLNLNSAYKLLSPDGQSEPPYTTWKIRPSGECRHTLDYIWYSQHAL 326
Query: 111 DVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK 149
+V + L + + EQIG +R+PS YPSDH SLVCD + +
Sbjct: 327 NVNSALGLLTEEQIGPNRLPSFNYPSDHLSLVCDFSFNQ 365
Score = 75 (31.5 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 1 MRIIIMKRGAPRQVAVLLVLRNKKTQEEICIATTHLKARNG 41
+R+ MK QVA+ L+ +T + CIA THLKAR G
Sbjct: 193 IRLTAMKLKT-NQVAIAQTLKCSETGKLFCIAVTHLKARTG 232
>UNIPROTKB|I3LN01 [details] [associations]
symbol:CCRN4L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] Pfam:PF03372
GeneTree:ENSGT00550000074364 InterPro:IPR005135 SUPFAM:SSF56219
CTD:25819 OMA:HPEYLVS EMBL:FP102607 RefSeq:XP_003129235.1
UniGene:Ssc.9136 Ensembl:ENSSSCT00000031350 GeneID:100513746
KEGG:ssc:100513746 Uniprot:I3LN01
Length = 427
Score = 256 (95.2 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 49/99 (49%), Positives = 67/99 (67%)
Query: 52 EPTEPIYNTVMNHETLGLTSAYRHRTANNQ-EPQYTTWKIREEGEVCHTIDYVFYSQDKF 110
EPTE +Y + +L L+SAY+ +A+ Q EP YTTWKIR GE HT+DY++YS+
Sbjct: 328 EPTEEVYKHFAS-SSLNLSSAYKLLSADGQSEPPYTTWKIRTSGECRHTLDYIWYSRQAL 386
Query: 111 DVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK 149
V + LD+ + EQIG +R+PS YPSDH SLVCD + +
Sbjct: 387 SVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSFNE 425
Score = 73 (30.8 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 13 QVAVLLVLRNKKTQEEICIATTHLKARNG 41
QVA+ L + ++ + CIA THLKAR G
Sbjct: 264 QVAIAQTLECRASRRQFCIAVTHLKARTG 292
>UNIPROTKB|Q9UK39 [details] [associations]
symbol:CCRN4L "Nocturnin" species:9606 "Homo sapiens"
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03372 GO:GO:0005654 GO:GO:0003700
GO:GO:0048511 GO:GO:0006366 EMBL:CH471056 eggNOG:COG5239
InterPro:IPR005135 SUPFAM:SSF56219 Reactome:REACT_24941
CleanEx:HS_CCR4 EMBL:AF183961 EMBL:BC113494 EMBL:BC113500
EMBL:AF199492 EMBL:AF199493 EMBL:AF199494 IPI:IPI00015890
RefSeq:NP_036250.2 UniGene:Hs.639842 UniGene:Hs.656047
ProteinModelPortal:Q9UK39 SMR:Q9UK39 IntAct:Q9UK39 STRING:Q9UK39
PhosphoSite:Q9UK39 DMDM:212276446 PaxDb:Q9UK39 PRIDE:Q9UK39
Ensembl:ENST00000280614 GeneID:25819 KEGG:hsa:25819 UCSC:uc003ihl.3
CTD:25819 GeneCards:GC04P139936 H-InvDB:HIX0004503 HGNC:HGNC:14254
MIM:608468 neXtProt:NX_Q9UK39 PharmGKB:PA26176 HOGENOM:HOG000237357
HOVERGEN:HBG006512 InParanoid:Q9UK39 OMA:HPEYLVS OrthoDB:EOG4NZTTH
PhylomeDB:Q9UK39 ChiTaRS:CCRN4L GenomeRNAi:25819 NextBio:47067
Bgee:Q9UK39 CleanEx:HS_CCRN4L Genevestigator:Q9UK39
GermOnline:ENSG00000151014 Uniprot:Q9UK39
Length = 431
Score = 254 (94.5 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 49/96 (51%), Positives = 66/96 (68%)
Query: 52 EPTEPIYNTVMNHETLGLTSAYRHRTANNQ-EPQYTTWKIREEGEVCHTIDYVFYSQDKF 110
EPTE +Y + +L L SAY+ +A+ Q EP YTTWKIR GE HT+DY++YS+
Sbjct: 328 EPTEEVYKHFAS-SSLNLNSAYKLLSADGQSEPPYTTWKIRTSGECRHTLDYIWYSKHAL 386
Query: 111 DVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLT 146
+V + LD+ + EQIG +R+PS YPSDH SLVCD +
Sbjct: 387 NVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFS 422
Score = 75 (31.5 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 13 QVAVLLVLRNKKTQEEICIATTHLKARNG 41
QVA+ L K++ + CIA THLKAR G
Sbjct: 264 QVAIAQTLECKESGRQFCIAVTHLKARTG 292
>MGI|MGI:109382 [details] [associations]
symbol:Ccrn4l "CCR4 carbon catabolite repression 4-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IGI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI] [GO:0048511 "rhythmic process" evidence=IEA]
Pfam:PF03372 MGI:MGI:109382 GO:GO:0048511 GO:GO:0000932
eggNOG:COG5239 GeneTree:ENSGT00550000074364 InterPro:IPR005135
SUPFAM:SSF56219 GO:GO:0033962 CleanEx:MM_CCR4 GO:GO:0000290
CTD:25819 HOGENOM:HOG000237357 HOVERGEN:HBG006512 OMA:HPEYLVS
OrthoDB:EOG4NZTTH ChiTaRS:CCRN4L EMBL:U70139 EMBL:AF183960
EMBL:AF199491 EMBL:AK087790 IPI:IPI00133829 IPI:IPI00662222
RefSeq:NP_033964.1 UniGene:Mm.86541 ProteinModelPortal:O35710
SMR:O35710 STRING:O35710 PhosphoSite:O35710 PaxDb:O35710
PRIDE:O35710 Ensembl:ENSMUST00000023849 Ensembl:ENSMUST00000167780
GeneID:12457 KEGG:mmu:12457 UCSC:uc008pdn.2 InParanoid:O35710
BRENDA:3.1.13.4 NextBio:281308 Bgee:O35710 Genevestigator:O35710
GermOnline:ENSMUSG00000023087 Uniprot:O35710
Length = 429
Score = 248 (92.4 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 48/99 (48%), Positives = 65/99 (65%)
Query: 52 EPTEPIYNTVMNHETLGLTSAYRHRTANNQ-EPQYTTWKIREEGEVCHTIDYVFYSQDKF 110
EPTE +Y + +L L SAY+ + + Q EP YTTWKIR GE HT+DY++YS+
Sbjct: 326 EPTEEVYKHFAS-SSLNLNSAYKLLSPDGQSEPPYTTWKIRTSGECRHTLDYIWYSRHAL 384
Query: 111 DVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK 149
V + LD+ + EQIG +R+PS YPSDH SLVCD + +
Sbjct: 385 SVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSFNE 423
Score = 75 (31.5 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 13 QVAVLLVLRNKKTQEEICIATTHLKARNG 41
QVA+ L K++ + CIA THLKAR G
Sbjct: 262 QVAIAQTLECKESGRQFCIAVTHLKARTG 290
>UNIPROTKB|F1SGK9 [details] [associations]
symbol:PDE12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF03372
GO:GO:0005739 GeneTree:ENSGT00550000074364 InterPro:IPR005135
SUPFAM:SSF56219 OMA:FRWYKEA EMBL:CU467952 RefSeq:XP_001926497.2
UniGene:Ssc.33948 Ensembl:ENSSSCT00000012546 GeneID:100157651
KEGG:ssc:100157651 Uniprot:F1SGK9
Length = 609
Score = 127 (49.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 67 LGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGR 126
+ LT ++ ++A EP YT + G C +DY+F + +VE V+ +PS E++
Sbjct: 532 MSLTHFFKLKSACG-EPAYTNYVGGFHG--C--LDYIFIDLNTLEVEQVIPLPSHEEVTT 586
Query: 127 DR-IPSLRYPSDHFSLVCDLTLK 148
+ +PS+ +PSDH +LVCDL K
Sbjct: 587 HQALPSVSHPSDHIALVCDLKWK 609
Score = 56 (24.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHL 36
+++R + QV+VL K + ++IC+A THL
Sbjct: 428 VLQRSSVLQVSVLQ--STKDSSKKICVANTHL 457
>UNIPROTKB|Q6L8Q7 [details] [associations]
symbol:PDE12 "2',5'-phosphodiesterase 12" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF03372
GO:GO:0005739 EMBL:CH471055 GO:GO:0016787 eggNOG:COG5239
InterPro:IPR005135 SUPFAM:SSF56219 CTD:201626 HOGENOM:HOG000006935
HOVERGEN:HBG061027 OMA:FRWYKEA OrthoDB:EOG4JDH6H EMBL:AB115695
EMBL:AK074423 EMBL:AK300374 EMBL:AL831824 IPI:IPI00174390
IPI:IPI00886797 RefSeq:NP_808881.3 UniGene:Hs.572993
ProteinModelPortal:Q6L8Q7 SMR:Q6L8Q7 IntAct:Q6L8Q7 STRING:Q6L8Q7
PhosphoSite:Q6L8Q7 DMDM:172046137 PaxDb:Q6L8Q7 PRIDE:Q6L8Q7
DNASU:201626 Ensembl:ENST00000311180 GeneID:201626 KEGG:hsa:201626
UCSC:uc003diw.4 GeneCards:GC03P057541 H-InvDB:HIX0003393
HGNC:HGNC:25386 HPA:HPA043171 neXtProt:NX_Q6L8Q7
PharmGKB:PA162399016 InParanoid:Q6L8Q7 PhylomeDB:Q6L8Q7
GenomeRNAi:201626 NextBio:90179 ArrayExpress:Q6L8Q7 Bgee:Q6L8Q7
CleanEx:HS_PDE12 Genevestigator:Q6L8Q7 Uniprot:Q6L8Q7
Length = 609
Score = 127 (49.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 67 LGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGR 126
+ LT ++ ++A EP YT + G C +DY+F + +VE V+ +PS E++
Sbjct: 532 MSLTHFFKLKSACG-EPAYTNYVGGFHG--C--LDYIFIDLNALEVEQVIPLPSHEEVTT 586
Query: 127 DR-IPSLRYPSDHFSLVCDLTLK 148
+ +PS+ +PSDH +LVCDL K
Sbjct: 587 HQALPSVSHPSDHIALVCDLKWK 609
Score = 55 (24.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHL 36
+++R + QV+VL K + + IC+A THL
Sbjct: 428 VLQRSSVLQVSVLQ--STKDSSKRICVANTHL 457
>RGD|1310975 [details] [associations]
symbol:Pde12 "phosphodiesterase 12" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF03372
RGD:1310975 GO:GO:0016787 eggNOG:COG5239
GeneTree:ENSGT00550000074364 InterPro:IPR005135 SUPFAM:SSF56219
HOGENOM:HOG000006935 HOVERGEN:HBG061027 EMBL:BC079396
IPI:IPI00464947 UniGene:Rn.225980 ProteinModelPortal:Q6AXQ5
PhosphoSite:Q6AXQ5 Ensembl:ENSRNOT00000017800 UCSC:RGD:1310975
OMA:LICLANT ArrayExpress:Q6AXQ5 Genevestigator:Q6AXQ5
Uniprot:Q6AXQ5
Length = 608
Score = 129 (50.5 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 67 LGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGR 126
+ LT ++ ++A EP YT + G C +DY+F + +VE V+ +PS E++
Sbjct: 531 MSLTHCFKLKSACG-EPAYTNYVGGFHG--C--LDYIFIDLNALEVEQVIPLPSHEEVTT 585
Query: 127 DR-IPSLRYPSDHFSLVCDLTLK 148
+ +PS+ +PSDH +LVCDL K
Sbjct: 586 HQALPSVSHPSDHIALVCDLKWK 608
Score = 49 (22.3 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHL 36
+++R + Q++VL + + ++IC+A THL
Sbjct: 427 VLQRSSVLQISVLQSTTD--SSKKICVANTHL 456
>UNIPROTKB|F1NGS9 [details] [associations]
symbol:PDE12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF03372
GO:GO:0005739 GeneTree:ENSGT00550000074364 InterPro:IPR005135
SUPFAM:SSF56219 OMA:FRWYKEA EMBL:AADN02014019 IPI:IPI00572753
Ensembl:ENSGALT00000009018 Uniprot:F1NGS9
Length = 569
Score = 129 (50.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 82 EPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDR-IPSLRYPSDHFS 140
EP YT + G +DYVF Q+ +VE V+ +PS E++ + +PS+ +PSDH +
Sbjct: 506 EPAYTNYV----GGFYGCLDYVFIDQNALEVEQVIPLPSHEEVTTHQALPSVSHPSDHIA 561
Query: 141 LVCDLTLK 148
LVCDL K
Sbjct: 562 LVCDLKWK 569
Score = 48 (22.0 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHLKARNGALLSTLR 48
+++R + QV+VL +++C+A THL AL +R
Sbjct: 386 VLQRSSVLQVSVLQ--SETDPSKKLCVANTHLYWHPKALGGNIR 427
>UNIPROTKB|Q08DF7 [details] [associations]
symbol:PDE12 "2',5'-phosphodiesterase 12" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] Pfam:PF03372 GO:GO:0005739
GO:GO:0016787 eggNOG:COG5239 GeneTree:ENSGT00550000074364
InterPro:IPR005135 SUPFAM:SSF56219 EMBL:BC123772 IPI:IPI00717658
RefSeq:NP_001069601.1 UniGene:Bt.42120 ProteinModelPortal:Q08DF7
Ensembl:ENSBTAT00000020675 GeneID:538860 KEGG:bta:538860 CTD:201626
HOGENOM:HOG000006935 HOVERGEN:HBG061027 InParanoid:Q08DF7
OMA:FRWYKEA OrthoDB:EOG4JDH6H NextBio:20877627 Uniprot:Q08DF7
Length = 609
Score = 121 (47.7 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 67 LGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGR 126
+ L+ ++ ++A EP YT + G C +DY+F +VE V+ +PS E++
Sbjct: 532 MSLSHFFKLKSACG-EPAYTNYVGGFHG--C--LDYIFIDLHALEVEQVIPLPSHEEVTT 586
Query: 127 DR-IPSLRYPSDHFSLVCDLTLK 148
+ +PS+ +PSDH +LVCDL K
Sbjct: 587 HQALPSVSHPSDHIALVCDLKWK 609
Score = 55 (24.4 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHL 36
+++R + QV+VL K + ++IC+A THL
Sbjct: 428 VLQRSSVVQVSVLQ--STKDSSKKICVANTHL 457
>UNIPROTKB|E2R412 [details] [associations]
symbol:PDE12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
Pfam:PF03372 GO:GO:0005739 GeneTree:ENSGT00550000074364
InterPro:IPR005135 SUPFAM:SSF56219 CTD:201626 OMA:FRWYKEA
EMBL:AAEX03012165 RefSeq:XP_541830.2 Ensembl:ENSCAFT00000012438
GeneID:484714 KEGG:cfa:484714 Uniprot:E2R412
Length = 616
Score = 123 (48.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 67 LGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGR 126
+ L+ ++ ++A EP YT + G C +DY+F + +VE V+ +PS E++
Sbjct: 539 MSLSHFFKLKSACG-EPAYTNYVGGFHG--C--LDYIFIDLNALEVEQVIPLPSHEEVTT 593
Query: 127 DR-IPSLRYPSDHFSLVCDLTLK 148
+ +PS+ +PSDH +LVCDL K
Sbjct: 594 HQALPSVSHPSDHIALVCDLKWK 616
Score = 53 (23.7 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHL 36
+++R + QV+VL K + + +C+A THL
Sbjct: 435 VLQRSSVLQVSVLQ--STKDSSKRLCVANTHL 464
>MGI|MGI:2443226 [details] [associations]
symbol:Pde12 "phosphodiesterase 12" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF03372 MGI:MGI:2443226 GO:GO:0005739 GO:GO:0016787
eggNOG:COG5239 GeneTree:ENSGT00550000074364 InterPro:IPR005135
SUPFAM:SSF56219 UniGene:Mm.297768 CTD:201626 HOGENOM:HOG000006935
HOVERGEN:HBG061027 OMA:FRWYKEA OrthoDB:EOG4JDH6H EMBL:AK051991
EMBL:AK082947 EMBL:AK088843 EMBL:AK155088 EMBL:AK161083
EMBL:AK167708 EMBL:BC064450 IPI:IPI00420284 RefSeq:NP_848783.3
UniGene:Mm.290758 ProteinModelPortal:Q3TIU4 SMR:Q3TIU4
STRING:Q3TIU4 PhosphoSite:Q3TIU4 PaxDb:Q3TIU4 PRIDE:Q3TIU4
Ensembl:ENSMUST00000052932 GeneID:211948 KEGG:mmu:211948
UCSC:uc007stb.1 InParanoid:Q3TIU4 ChiTaRS:PDE12 NextBio:373405
Bgee:Q3TIU4 Genevestigator:Q3TIU4 Uniprot:Q3TIU4
Length = 608
Score = 124 (48.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/84 (34%), Positives = 50/84 (59%)
Query: 66 TLGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIG 125
++ L+ ++ ++A EP YT + G C +DY+F + +VE V+ +PS E++
Sbjct: 530 SMPLSHCFKLKSACG-EPAYTNYVGGFHG--C--LDYIFIDLNTLEVEQVIPLPSHEEVT 584
Query: 126 RDR-IPSLRYPSDHFSLVCDLTLK 148
+ +PS+ +PSDH +LVCDL K
Sbjct: 585 THQALPSVSHPSDHIALVCDLKWK 608
Score = 49 (22.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHL 36
+++R + Q++VL + + ++IC+A THL
Sbjct: 427 VLQRSSVLQISVLQSTTD--SSKKICVANTHL 456
>ZFIN|ZDB-GENE-060519-25 [details] [associations]
symbol:pde12 "phosphodiesterase 12" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] Pfam:PF03372
ZFIN:ZDB-GENE-060519-25 GeneTree:ENSGT00550000074364
InterPro:IPR005135 SUPFAM:SSF56219 EMBL:FP067440 EMBL:CU638695
IPI:IPI00882873 Ensembl:ENSDART00000067608 ArrayExpress:F1RBC5
Bgee:F1RBC5 Uniprot:F1RBC5
Length = 591
Score = 117 (46.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 67 LGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGR 126
LGLT+ ++ +A P +T + +G C +DY+F VE V+ +PS E++
Sbjct: 510 LGLTNPFQLSSACGV-PDFTNFVGGFQG--C--LDYIFVEPRTLQVEQVIPLPSLEEVSN 564
Query: 127 D-RIPSLRYPSDHFSLVCDL 145
+PS+ +PSDH +LVCDL
Sbjct: 565 CVALPSISHPSDHIALVCDL 584
Score = 40 (19.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 5 IMKRGAPRQVAVLLVLRNKKTQEEICIATTHL 36
I KR QV VL L + +C+ THL
Sbjct: 406 IEKRSTTLQVTVLQSLCDPS--RILCVGNTHL 435
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 149 149 0.00078 104 3 11 22 0.46 31
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 593 (63 KB)
Total size of DFA: 147 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 15.69u 0.09s 15.78t Elapsed: 00:00:01
Total cpu time: 15.69u 0.09s 15.78t Elapsed: 00:00:02
Start: Thu Aug 15 15:04:39 2013 End: Thu Aug 15 15:04:41 2013