RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12258
(171 letters)
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 53.0 bits (128), Expect = 4e-11
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 78 IHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
IH+GE+ Y C C KAF SS L H+R+HTGE
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 44.9 bits (107), Expect = 4e-08
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGE 82
HS K + C CGK F+R LV H+R+HTGE
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 42.6 bits (101), Expect = 4e-07
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 106 IHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
IH+GEKP+ C C K F S + +H H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 31.1 bits (71), Expect = 0.005
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 1 MCDTCGKSFFSSTALKVHNRVHLG 24
C CGK+F S+ L H RVH G
Sbjct: 9 GCVECGKAFSRSSILVQHQRVHTG 32
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 49.8 bits (119), Expect = 7e-10
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
R Y+C+ C K+F SS L HRR HTGE
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 40.1 bits (94), Expect = 3e-06
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
+ + C C K F SD+ +H TH
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 38.2 bits (89), Expect = 2e-05
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGE 82
+ + ++C+ CGK F+ L HRR HTGE
Sbjct: 7 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 32.8 bits (75), Expect = 0.001
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHK 47
+ Y C+ CG+ F DL H+
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHR 32
Score = 24.0 bits (52), Expect = 2.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 1 MCDTCGKSFFSSTALKVHNRVHLG 24
CD CGKSF S+ L H R H G
Sbjct: 14 KCDECGKSFSHSSDLSKHRRTHTG 37
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 49.3 bits (118), Expect = 9e-10
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 77 RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEK 111
R HTGE+ Y C C K FR L H + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 43.5 bits (103), Expect = 2e-07
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 105 RIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHN 136
R HTGEKP+ C C+K FR + + H ++
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 39.3 bits (92), Expect = 5e-06
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGE 82
H+ K + C +C K F +K L +H + +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 34.3 bits (79), Expect = 4e-04
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 20 RVHLGLKPYGCEVCGRHFRQWGDLKYHK 47
R H G KPY C C + FRQ L H
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHF 28
Score = 28.1 bits (63), Expect = 0.078
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 1 MCDTCGKSFFSSTALKVHNRVH 22
C C K+F L +H + +
Sbjct: 10 ACSHCDKTFRQKQLLDMHFKRY 31
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 48.5 bits (116), Expect = 2e-09
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 80 TGERNYQCEFCHKAFRASSYLQNH-RRIHTGEKPHFCPV 117
+ + Y C+ C K F +L H +++HT E+PH C V
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 47.3 bits (113), Expect = 7e-09
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 55 KAFQCEYCGKDFARKYSLVVH-RRIHTGERNYQCE 88
K + C+ CGK F+R L H +++HT ER ++C+
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 38.4 bits (90), Expect = 1e-05
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 26 KPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCE 60
KPY C+ CG+ F + L H +H+ + +C+
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 38.1 bits (89), Expect = 2e-05
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 1 MCDTCGKSFFSSTALKVHNR-VHLGLKPYGCEV 32
+C +CGK F L H + VH +P+ C+V
Sbjct: 7 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 29.2 bits (66), Expect = 0.025
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 108 TGEKPHFCPVCNKMFRVRSDMKRHL 132
+ KP+ C C K F + H+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHI 25
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 46.9 bits (112), Expect = 7e-09
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 77 RIHTGERNYQCEFCHKAFRASSYLQNH-RRIHTGE 110
R H+GE+ Y+C CH F S ++ H + HT
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 41.9 bits (99), Expect = 6e-07
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 105 RIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
R H+GEKP+ C +C+ F MK H+
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 39.2 bits (92), Expect = 6e-06
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 20 RVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSD 53
R H G KPY C +C F Q G +K H H++
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 36.1 bits (84), Expect = 8e-05
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 51 HSDVKAFQCEYCGKDFARKYSLVVH-RRIHTGE 82
HS K ++C C F + ++ +H + HT
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 24.9 bits (55), Expect = 0.92
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 2 CDTCGKSFFSSTALKVHNRVH 22
C C F S +K+H
Sbjct: 11 CYICHARFTQSGTMKMHILQK 31
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 46.6 bits (111), Expect = 1e-08
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTG 109
R TG + +QC C ++F S +L HR+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 42.8 bits (101), Expect = 3e-07
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
R TG KP CP C++ F + H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 34.3 bits (79), Expect = 4e-04
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHK 47
R G+KP+ C C R F + L H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31
Score = 33.9 bits (78), Expect = 5e-04
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTG 81
+ +K FQC C + F+R L +HR+ H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 26.2 bits (58), Expect = 0.29
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 1 MCDTCGKSFFSSTALKVHNRVHLG 24
C C +SF S L +H + H+
Sbjct: 13 QCPDCDRSFSRSDHLALHRKRHML 36
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 47.0 bits (111), Expect = 1e-08
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIH 107
K + C+ CGK F K H +H G R Y C C K F+ +L H +IH
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 44.3 bits (104), Expect = 1e-07
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 82 ERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
++ Y C+ C K+F S H +H G +P+ C VC K F+++ + H+ H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 35.0 bits (80), Expect = 3e-04
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 5 CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHK 47
CGKSF + H +HLGL+PYGC VCG+ F+ L H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50
Score = 26.2 bits (57), Expect = 0.56
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 1 MCDTCGKSFFSSTALKVHNRVH 22
C CGK F L H ++H
Sbjct: 32 GCGVCGKKFKMKHHLVGHMKIH 53
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 45.9 bits (109), Expect = 2e-08
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 56 AFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCEF 89
+F C CGK F K L H ++H+ R+Y CEF
Sbjct: 1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 42.4 bits (100), Expect = 3e-07
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 84 NYQCE--FCHKAFRASSYLQNHRRIHTGEKPHFC 115
++ C C K+F +L+ H ++H+ + + C
Sbjct: 1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 37.0 bits (86), Expect = 4e-05
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
CGKSF LK H ++H + Y CE
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 22.4 bits (48), Expect = 8.6
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 115 CPVCNKMFRVRSDMKRHLNTH 135
P C K F + +K H+ H
Sbjct: 6 EPACGKSFNFKKHLKEHMKLH 26
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 43.4 bits (103), Expect = 2e-07
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 83 RNYQCEFCHKAFRASSYLQNHRRIHTGEK 111
R++ CE C +AF +L+ H R HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 43.0 bits (102), Expect = 2e-07
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGER 83
++F CE C + FAR+ L H R HT E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 31.1 bits (71), Expect = 0.006
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 1 MCDTCGKSFFSSTALKVHNRVHLGLK 26
+C+ C ++F LK H R H K
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.7 bits (70), Expect = 0.008
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 111 KPHFCPVCNKMFRVRSDMKRHLNTH 135
+ C VC + F + +KRH +H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 41.7 bits (98), Expect = 7e-07
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
+G+R + C C AF + H ++HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 38.2 bits (89), Expect = 2e-05
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERN 84
S + F C C F K + H ++HT +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 35
Score = 35.5 bits (82), Expect = 1e-04
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 107 HTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
+G++P C +C F +++ RHL H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.3 bits (66), Expect = 0.022
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 22 HLGLKPYGCEVCGRHFRQWGDLKYHK 47
G +P+ C +C F + H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHL 27
Score = 26.3 bits (58), Expect = 0.35
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 1 MCDTCGKSFFSSTALKVHNRVH 22
+C C +F + H +VH
Sbjct: 9 VCRICLSAFTTKANCARHLKVH 30
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 41.6 bits (98), Expect = 8e-07
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGER 83
K F C C K F R L H + H ++
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 40.4 bits (95), Expect = 2e-06
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 85 YQCEFCHKAFRASSYLQNHRRIHTGEK 111
+ C C K F S +L H + H +K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 29.6 bits (67), Expect = 0.017
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 111 KPHFCPVCNKMFRVRSDMKRHLNTH 135
K CP C K F + +H+ TH
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
Score = 28.8 bits (65), Expect = 0.029
Identities = 9/26 (34%), Positives = 10/26 (38%)
Query: 1 MCDTCGKSFFSSTALKVHNRVHLGLK 26
C C K F S L H + H K
Sbjct: 4 ACPECPKRFMRSDHLSKHIKTHQNKK 29
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 41.1 bits (97), Expect = 1e-06
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 82 ERNYQCEFCHKAFRASSYLQNHRRIHTG 109
++ +QC C + F S +L H R HTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 39.9 bits (94), Expect = 3e-06
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTG 81
K FQC C ++F+R L H R HTG
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 31.8 bits (73), Expect = 0.003
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 110 EKPHFCPVCNKMFRVRSDMKRHLNTH 135
+KP C +C + F + H+ TH
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTH 26
Score = 30.7 bits (70), Expect = 0.007
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 1 MCDTCGKSFFSSTALKVHNRVHLG 24
C C ++F S L H R H G
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTG 28
Score = 30.3 bits (69), Expect = 0.010
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 26 KPYGCEVCGRHFRQWGDLKYHK 47
KP+ C +C R+F + L H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHI 23
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 40.7 bits (95), Expect = 2e-06
Identities = 6/39 (15%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 75 HRRIHTGERNYQCEFC--HKAFRASSYLQNHRRIHTGEK 111
++ ++C F K F+ +++H + H ++
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 30.7 bits (69), Expect = 0.009
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 102 NHRRIHTGEKPHFCPVC--NKMFRVRSDMKRHLNTH 135
+ +K C K F+ R +++ H+ TH
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 30.7 bits (69), Expect = 0.010
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 51 HSDVKAFQCEYC--GKDFARKYSLVVHRRIHTGER 83
K F+C + K F R+Y++ H + H +R
Sbjct: 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 38.5 bits (90), Expect = 1e-05
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHTGER 83
+ F C + CGK F R L H+R HTGE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 38.5 bits (90), Expect = 1e-05
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 83 RNYQC--EFCHKAFRASSYLQNHRRIHTGEK 111
R + C +C K F S LQ H+R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 27.3 bits (61), Expect = 0.11
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 5 CGKSFFSSTALKVHNRVHLGLK 26
CGK F S L+ H R H G K
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31
Score = 26.1 bits (58), Expect = 0.35
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 111 KPHFC--PVCNKMFRVRSDMKRHLNTH 135
+P C C K F +++RH TH
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 30
Score = 37.7 bits (88), Expect = 2e-05
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHTGE 82
K +C + C K ++R +L H R HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 36.9 bits (86), Expect = 4e-05
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 83 RNYQC--EFCHKAFRASSYLQNHRRIHTGE 110
+ ++C E C K++ L+ H R HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 28.1 bits (63), Expect = 0.060
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 5 CGKSFFSSTALKVHNRVHLG 24
C KS+ LK H R H G
Sbjct: 10 CRKSYSRLENLKTHLRSHTG 29
Score = 26.1 bits (58), Expect = 0.30
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 111 KPHFC--PVCNKMFRVRSDMKRHLNTH 135
KPH C C K + ++K HL +H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
Score = 24.6 bits (54), Expect = 1.3
Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 26 KPYGC--EVCGRHFRQWGDLKYHK 47
KP+ C E C + + + +LK H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHL 24
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 36.4 bits (85), Expect = 5e-05
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHT 80
K ++C CGK F++ L+ H+RIHT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 36.0 bits (84), Expect = 7e-05
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 85 YQCEFCHKAFRASSYLQNHRRIHT 108
Y+C C KAF +S L NH+RIHT
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
Score = 28.3 bits (64), Expect = 0.054
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 2 CDTCGKSFFSSTALKVHNRVH 22
C CGK+F ++ L H R+H
Sbjct: 5 CLECGKAFSQNSGLINHQRIH 25
Score = 27.9 bits (63), Expect = 0.068
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 26 KPYGCEVCGRHFRQWGDLKYHK 47
KPY C CG+ F Q L H+
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQ 22
Score = 26.4 bits (59), Expect = 0.22
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 111 KPHFCPVCNKMFRVRSDMKRHLNTH 135
KP+ C C K F S + H H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 36.2 bits (84), Expect = 7e-05
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 82 ERNYQCEF--CHKAFRASSYLQNHRRIHTGE 110
+R Y C+ C KAF + L H++ H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 33.8 bits (78), Expect = 6e-04
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHTGE 82
+ + C++ C K F R + L+ H++ H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 29.6 bits (67), Expect = 0.020
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 110 EKPHFCPV--CNKMFRVRSDMKRHLNTH 135
++P+ C C+K F D+ RH +H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28
Score = 25.8 bits (57), Expect = 0.43
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 3 DTCGKSFFSSTALKVHNRVH 22
C K+F + L H + H
Sbjct: 9 PGCDKAFVRNHDLIRHKKSH 28
Score = 23.4 bits (51), Expect = 2.7
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 26 KPYGCEV--CGRHFRQWGDLKYHK 47
+PY C+ C + F + DL HK
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHK 25
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 35.0 bits (81), Expect = 2e-04
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHTGE 82
K FQC + CGK F+ ++L H RIHTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 34.3 bits (79), Expect = 4e-04
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 83 RNYQCEF--CHKAFRASSYLQNHRRIHTGE 110
+ +QC F C K F L+ H RIHTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 26.6 bits (59), Expect = 0.21
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 5 CGKSFFSSTALKVHNRVHLG 24
CGK F L+ H R+H G
Sbjct: 10 CGKRFSLDFNLRTHVRIHTG 29
Score = 24.6 bits (54), Expect = 1.1
Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 111 KPHFC--PVCNKMFRVRSDMKRHLNTH 135
KP C C K F + +++ H+ H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
Score = 22.7 bits (49), Expect = 5.3
Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 26 KPYGCEV--CGRHFRQWGDLKYHK 47
KP+ C CG+ F +L+ H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHV 24
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 34.6 bits (80), Expect = 2e-04
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 83 RNYQCEF--CHKAFRASSYLQNHRRIHTG 109
R Y C C + F S+ L H RIHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 34.6 bits (80), Expect = 2e-04
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHTG 81
+ + C C + F+R L H RIHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 27.7 bits (62), Expect = 0.077
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 5 CGKSFFSSTALKVHNRVHLG 24
C + F S L H R+H G
Sbjct: 10 CDRRFSRSADLTRHIRIHTG 29
Score = 25.7 bits (57), Expect = 0.40
Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 111 KPHFC--PVCNKMFRVRSDMKRHLNTH 135
+P+ C C++ F +D+ RH+ H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
Score = 23.4 bits (51), Expect = 3.1
Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 26 KPYGC--EVCGRHFRQWGDLKYHK 47
+PY C E C R F + DL H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHI 24
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 32.7 bits (74), Expect = 0.002
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 83 RNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
+ CE C K FR +L H+ H+GEKP+
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 27.3 bits (60), Expect = 0.15
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGERNY 85
K CE CGK F Y L H+ H+GE+ Y
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 25.4 bits (55), Expect = 0.65
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 2 CDTCGKSFFSSTALKVHNRVHLGLKPY 28
C+ CGK F L H H G KPY
Sbjct: 8 CEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 24.6 bits (53), Expect = 1.2
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 26 KPYGCEVCGRHFRQWGDLKYHKASLHSDVKAF 57
K CE+CG+ FR L HK S HS K +
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLS-HSGEKPY 34
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 30.4 bits (68), Expect = 0.009
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 86 QCEFCHKAFRASSYLQNHRRIHTGEK 111
+C CHK F + YL+ H R HTGEK
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 28.9 bits (64), Expect = 0.031
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 58 QCEYCGKDFARKYSLVVHRRIHTGER 83
+C C K F KY L VH R HTGE+
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 27.7 bits (61), Expect = 0.084
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 2 CDTCGKSFFSSTALKVHNRVHLGLK 26
C TC K F S LKVHNR H G K
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 29.6 bits (67), Expect = 0.014
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHT 80
+ + C + C K FA+ +L H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 29.6 bits (67), Expect = 0.018
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 83 RNYQCEF--CHKAFRASSYLQNHRRIHT 108
R Y C F C+K F S+ L++H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 27.3 bits (61), Expect = 0.11
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 111 KPHFCPV--CNKMFRVRSDMKRHLNTH 135
+P+ CP CNK F +++K H+ TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 26.5 bits (59), Expect = 0.18
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 3 DTCGKSFFSSTALKVHNRVH 22
D C K F ST LK H H
Sbjct: 8 DGCNKKFAQSTNLKSHILTH 27
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 29.6 bits (66), Expect = 0.019
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 82 ERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
ER ++C+ C A R SS L H R HTG+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 22.7 bits (48), Expect = 4.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGE 82
+ F+C+ C L VH R HTG+
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 29.3 bits (66), Expect = 0.024
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 59 CEYCGKDFARKYSLVVHRRIHTGE 82
C + F +Y LVVH R HTGE
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
Score = 23.9 bits (52), Expect = 2.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 87 CEFCHKAFRASSYLQNHRRIHTGE 110
C + F+A L H R HTGE
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.0 bits (62), Expect = 0.069
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 83 RNYQCEFCHKAFRASSYLQNHRRIHTGE 110
R + C C KAF SS L+ H+ +HTGE
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 26.1 bits (57), Expect = 0.27
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 MCDTCGKSFFSSTALKVHNRVHLG 24
+C CGK+F S+ LK H VH G
Sbjct: 4 VCAECGKAFVESSKLKRHQLVHTG 27
Score = 23.4 bits (50), Expect = 2.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 59 CEYCGKDFARKYSLVVHRRIHTGE 82
C CGK F L H+ +HTGE
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
Score = 23.0 bits (49), Expect = 3.7
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 113 HFCPVCNKMFRVRSDMKRHLNTH 135
H C C K F S +KRH H
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVH 25
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 28.1 bits (63), Expect = 0.071
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 83 RNYQCEFCHKAFRASSYLQNHRRIHTGEK 111
R+Y C FC + FR++ L H +H ++
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 26.6 bits (59), Expect = 0.22
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGERN 84
+++ C +C ++F +L H +H +R
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA 33
Score = 26.2 bits (58), Expect = 0.36
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 2 CDTCGKSFFSSTALKVHNRVH 22
C C + F S+ AL H VH
Sbjct: 8 CSFCKREFRSAQALGGHMNVH 28
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 27.5 bits (61), Expect = 0.10
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIH 79
K F C+ CG+ FAR H +IH
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
Score = 24.8 bits (54), Expect = 1.0
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 82 ERNYQCEFCHKAFRASSYLQNHRRIH 107
E+ + C+ C + F S + H +IH
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 24.8 bits (54), Expect = 1.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 2 CDTCGKSFFSSTALKVHNRVHL 23
CD CG+ F S K H ++HL
Sbjct: 6 CDICGRKFARSDERKRHTKIHL 27
Score = 24.4 bits (53), Expect = 1.3
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 110 EKPHFCPVCNKMFRVRSDMKRHLNTHN 136
EKP C +C + F + KRH H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIHL 27
Score = 23.6 bits (51), Expect = 2.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 26 KPYGCEVCGRHFRQWGDLKYH 46
KP+ C++CGR F + + K H
Sbjct: 2 KPFACDICGRKFARSDERKRH 22
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 27.3 bits (60), Expect = 0.12
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 110 EKPHFCPVCNKMFRVRSDMKRHLNTHN 136
EKP+ CPVC F+ + M H+ +H+
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHD 27
Score = 23.5 bits (50), Expect = 3.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTG 81
K + C CG F RK + H R H G
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 22.7 bits (48), Expect = 6.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 26 KPYGCEVCGRHFRQWGDLKYHKAS 49
KPY C VCG F++ + YH S
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRS 25
Score = 22.3 bits (47), Expect = 8.4
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 82 ERNYQCEFCHKAFRASSYLQNHRRIHTG 109
E+ Y C C F+ + H R H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 26.9 bits (59), Expect = 0.15
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 118 CNKMFRVRSDMKRHLNTH 135
C KMFR S M++HL+TH
Sbjct: 9 CTKMFRDNSAMRKHLHTH 26
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 27.0 bits (59), Expect = 0.16
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 58 QCEYCGKDFARKYSLVVHRRIHTG 81
+CE CGK F+RK L H R HTG
Sbjct: 3 KCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 25.0 bits (54), Expect = 0.74
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 112 PHFCPVCNKMFRVRSDMKRHLNTH 135
PH C VC K F + +K H+ H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
Score = 23.9 bits (51), Expect = 1.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 85 YQCEFCHKAFRASSYLQNHRRIHTG 109
++CE C K F L+ H R HTG
Sbjct: 2 HKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 23.5 bits (50), Expect = 2.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 2 CDTCGKSFFSSTALKVHNRVHLG 24
C+ CGK F LK H R H G
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHTG 26
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 27.7 bits (62), Expect = 0.18
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 109 GEKPHFCPVCNKMFRVRSDMKRHLNT 134
G H C C + F +++K H +
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFRS 37
Score = 23.9 bits (52), Expect = 3.7
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 81 GERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
G ++C C + F S+ L+ H R K H
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFR----SKDH 40
Score = 22.7 bits (49), Expect = 9.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 2 CDTCGKSFFSSTALKVHNR 20
C C + F ST LK H R
Sbjct: 18 CLACARYFIDSTNLKTHFR 36
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 25.1 bits (54), Expect = 0.69
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGE 82
+ F C C + F R+ L +H HTGE
Sbjct: 3 QVFTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 23.2 bits (49), Expect = 4.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 82 ERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
E+ + C C + FR L+ H HTGE
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 22.0 bits (46), Expect = 8.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 110 EKPHFCPVCNKMFRVRSDMKRHLNTH 135
E+ C VC + FR R +++ H+ +H
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSH 27
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 25.9 bits (56), Expect = 0.70
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 110 EKPHFCPVCNKMFRVRSDMKRHL 132
E+P CP+C + R +++RHL
Sbjct: 22 EQPATCPICYAVIRQSRNLRRHL 44
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 290
Score = 27.6 bits (61), Expect = 0.71
Identities = 14/74 (18%), Positives = 23/74 (31%), Gaps = 11/74 (14%)
Query: 30 CEVCG--------RHFRQWGDLKYHKASL-HSD--VKAFQCEYCGKDFARKYSLVVHRRI 78
C CG R + L+Y SL + +C +C + Y + H
Sbjct: 167 CPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEESKHLAYLSLEHDGQ 226
Query: 79 HTGERNYQCEFCHK 92
+ + E C
Sbjct: 227 PAEKAVLRAETCPS 240
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 24.8 bits (54), Expect = 0.77
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 59 CEYCGKDFARKYSLVVHRRIHTGER 83
CE CG + L H R HT R
Sbjct: 4 CEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 24.8 bits (54), Expect = 0.83
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 85 YQCEFCHKAFRASSYLQNHRRIHTGEK 111
Y CE C + S L+ H R HT +
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
>d2f5tx1 b.38.5.1 (X:247-338) Transcriptional regulator TrmB
{Thermococcus litoralis [TaxId: 2265]}
Length = 92
Score = 26.3 bits (58), Expect = 0.79
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 6/36 (16%)
Query: 121 MFRVRSDMKRHLNTHNVDARQYLTVTGS--QTGAPI 154
MF +K HL N+ Y +TG ++G
Sbjct: 10 MFHAVDFVKNHLKNRNI----YAEITGKNLESGRLE 41
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 37
Score = 25.1 bits (55), Expect = 0.92
Identities = 6/14 (42%), Positives = 7/14 (50%)
Query: 106 IHTGEKPHFCPVCN 119
E P +CPVC
Sbjct: 14 TAVDEAPEYCPVCG 27
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 36
Score = 25.0 bits (55), Expect = 0.94
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 106 IHTGEKPHFCPVCN 119
IH GE CP+C
Sbjct: 14 IHKGEDFEKCPICF 27
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 26
Score = 24.4 bits (52), Expect = 1.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 27 PYGCEVCGRHFRQWGDLKYHKASLH 51
PY C C + F Q DL+ H LH
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHMIKLH 26
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 298
Score = 26.8 bits (58), Expect = 1.5
Identities = 16/129 (12%), Positives = 32/129 (24%), Gaps = 5/129 (3%)
Query: 43 LKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQN 102
+K + E+ +D + I + + + ++ +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI---KSYLFQLLQGLAFCHS 120
Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYLTVTGSQTGAP--IKKEPKQ 160
HR +H KP + + +D V AP +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 161 ECNGDYWSY 169
D WS
Sbjct: 181 STAVDIWSL 189
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 23.9 bits (51), Expect = 2.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 108 TGEKPHFCPVCNKMFRVRSDMKRHLNT 134
TG KP+ C +C K F R RH+ +
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHVTS 27
Score = 23.6 bits (50), Expect = 3.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 24 GLKPYGCEVCGRHF 37
G+KPY C +C + F
Sbjct: 2 GIKPYECNICAKRF 15
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 25.8 bits (56), Expect = 2.6
Identities = 17/109 (15%), Positives = 29/109 (26%), Gaps = 5/109 (4%)
Query: 60 EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
E G K+ + I E H+ YL+ +H + N
Sbjct: 88 EMAGGGPLHKFLVGKREEIPVSNV---AELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN 144
Query: 120 KMFRVRSDMKRHLNTHNVDARQYLTVTGSQTGAPIKKEPKQECNGDYWS 168
+ + SD L+ Y T + P+ + S
Sbjct: 145 RHYAKISDFG--LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 191
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 23.5 bits (50), Expect = 2.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 85 YQCEFCHKAFRASSYLQNHRRIH 107
Y+C C ++F S L H+R+H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
Score = 22.0 bits (46), Expect = 9.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 2 CDTCGKSFFSSTALKVHNRVH 22
C C +SF +AL H RVH
Sbjct: 3 CGLCERSFVEKSALSRHQRVH 23
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.2 bits (49), Expect = 3.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 85 YQCEFCHKAFRASSYLQNHRRIHT 108
Y+C+ C A SS L H RIH+
Sbjct: 4 YKCKTCDYAAADSSSLNKHLRIHS 27
Score = 22.4 bits (47), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 54 VKAFQCEYCGKDFARKYSLVVHRRIHT 80
VK ++C+ C A SL H RIH+
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLRIHS 27
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 270
Score = 25.5 bits (56), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Query: 85 YQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFR 123
Y CEFC K ++ + LQ H + + F P N+++R
Sbjct: 32 YLCEFCLKYMKSRTILQQHMK----KCGWFHPPANEIYR 66
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 23.1 bits (49), Expect = 4.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 56 AFQCEYCGKDFARKYSLVVHRRIHTG 81
AF C CGK F R+ ++ H G
Sbjct: 4 AFVCSKCGKTFTRRNTMARHADNCAG 29
>d1v58a1 c.47.1.9 (A:62-230) Thiol:disulfide interchange protein
DsbG, C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 169
Score = 24.8 bits (53), Expect = 4.5
Identities = 2/30 (6%), Positives = 11/30 (36%)
Query: 84 NYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
+ C +C + ++ + + ++
Sbjct: 45 DPFCPYCKQFWQQARPWVDSGKVQLRTLLV 74
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 25.2 bits (55), Expect = 5.1
Identities = 7/39 (17%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Query: 85 YQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFR 123
+ CE+C K + + H + P +++R
Sbjct: 32 WLCEYCLKYMKYEKSYRFHLG----QCQWRQPPGKEIYR 66
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 22.7 bits (48), Expect = 5.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 57 FQCEYCGKDFARKYSLVVHRRI 78
+ C +C K+F RK ++ H +I
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKI 23
>d1twfi1 g.41.3.1 (I:1-49) RBP9 subunit of RNA polymerase II
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 49
Score = 23.2 bits (50), Expect = 5.6
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 113 HFCPVCNKMFRVRSDMKRH 131
FC CN M R D + +
Sbjct: 5 RFCRDCNNMLYPREDKENN 23
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 23.0 bits (49), Expect = 6.5
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 85 YQCEFCHKAFRASSYLQNHRRIH 107
C C K F ++ L+ H H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1gtma2 c.58.1.1 (A:3-180) Glutamate dehydrogenase {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 178
Score = 24.5 bits (53), Expect = 7.3
Identities = 9/61 (14%), Positives = 14/61 (22%), Gaps = 5/61 (8%)
Query: 41 GDLKYHKASLHSDVKAFQCEYCGKDFARKYSL-----VVHRRIHTGERNYQCEFCHKAFR 95
G +++H S VKA K + + R
Sbjct: 67 GGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIR 126
Query: 96 A 96
A
Sbjct: 127 A 127
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 22.1 bits (47), Expect = 8.8
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 57 FQCEYCGKDFARKYSLVVH-RRIHTG 81
+ C C + F R+ L+ H ++IH+G
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQKIHSG 27
>d1z6ma1 c.47.1.13 (A:1-172) Hypothetical protein EF0770
{Enterococcus faecalis [TaxId: 1351]}
Length = 172
Score = 24.2 bits (51), Expect = 9.5
Identities = 7/35 (20%), Positives = 10/35 (28%)
Query: 84 NYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC 118
N +C +C K F S L +
Sbjct: 33 NVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 67
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.136 0.457
Gapped
Lambda K H
0.267 0.0575 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 681,917
Number of extensions: 31278
Number of successful extensions: 479
Number of sequences better than 10.0: 1
Number of HSP's gapped: 466
Number of HSP's successfully gapped: 239
Length of query: 171
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 92
Effective length of database: 1,322,926
Effective search space: 121709192
Effective search space used: 121709192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.4 bits)