BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12278
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7ZVG6|SIAH1_DANRE E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2
Length = 282
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/277 (77%), Positives = 240/277 (86%), Gaps = 8/277 (2%)
Query: 21 VGSKKHGPGNGLNNISPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVC 80
G+ K P + +S +++SNS DLASLFECPVCFDYVLPPI+QCQSGHLVC
Sbjct: 11 TGTSKCPPSQRVPTLSGTTASNS--------DLASLFECPVCFDYVLPPILQCQSGHLVC 62
Query: 81 SNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCE 140
SNCRPKL+CCPTCRGPLG+IRNLAMEKVA ++ FPC+Y +GC ++L HT+K EHE+ CE
Sbjct: 63 SNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCE 122
Query: 141 HRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQ 200
RPY CPCPGASCKW G+LD VM HL HKSITTLQGEDIVFLATDINLPGAVDWVMMQ
Sbjct: 123 FRPYSCPCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQ 182
Query: 201 SCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRS 260
SCFG HFMLVLEKQEK+DGHQ FFAIVQLIG+RKQ+ENF YRLELNGHRRRLTWEATPRS
Sbjct: 183 SCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRS 242
Query: 261 IHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTI 297
IHEG+A+AIMNSDCLVFDT+IAQLFA+NGNLGINVTI
Sbjct: 243 IHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTI 279
>sp|Q920M9|SIAH1_RAT E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1
PE=1 SV=2
Length = 282
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/277 (77%), Positives = 240/277 (86%), Gaps = 8/277 (2%)
Query: 21 VGSKKHGPGNGLNNISPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVC 80
G+ K P + ++ +++SN+ DLASLFECPVCFDYVLPPI+QCQSGHLVC
Sbjct: 11 TGTSKCPPSQRVPALTGTTASNN--------DLASLFECPVCFDYVLPPILQCQSGHLVC 62
Query: 81 SNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCE 140
SNCRPKL+CCPTCRGPLG+IRNLAMEKVA ++ FPC+Y +GC I+L HTEK EHE+ CE
Sbjct: 63 SNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCE 122
Query: 141 HRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQ 200
RPY CPCPGASCKW G+LD VM HL HKSITTLQGEDIVFLATDINLPGAVDWVMMQ
Sbjct: 123 FRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQ 182
Query: 201 SCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRS 260
SCFG HFMLVLEKQEK+DGHQ FFAIVQLIG+RKQ+ENF YRLELNGHRRRLTWEATPRS
Sbjct: 183 SCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRS 242
Query: 261 IHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTI 297
IHEG+A+AIMNSDCLVFDT+IAQLFA+NGNLGINVTI
Sbjct: 243 IHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTI 279
>sp|P61092|SIA1A_MOUSE E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1
SV=1
Length = 282
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/277 (77%), Positives = 240/277 (86%), Gaps = 8/277 (2%)
Query: 21 VGSKKHGPGNGLNNISPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVC 80
G+ K P + ++ +++SN+ DLASLFECPVCFDYVLPPI+QCQSGHLVC
Sbjct: 11 TGTSKCPPSQRVPALTGTTASNN--------DLASLFECPVCFDYVLPPILQCQSGHLVC 62
Query: 81 SNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCE 140
SNCRPKL+CCPTCRGPLG+IRNLAMEKVA ++ FPC+Y +GC I+L HTEK EHE+ CE
Sbjct: 63 SNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCE 122
Query: 141 HRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQ 200
RPY CPCPGASCKW G+LD VM HL HKSITTLQGEDIVFLATDINLPGAVDWVMMQ
Sbjct: 123 FRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQ 182
Query: 201 SCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRS 260
SCFG HFMLVLEKQEK+DGHQ FFAIVQLIG+RKQ+ENF YRLELNGHRRRLTWEATPRS
Sbjct: 183 SCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRS 242
Query: 261 IHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTI 297
IHEG+A+AIMNSDCLVFDT+IAQLFA+NGNLGINVTI
Sbjct: 243 IHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTI 279
>sp|Q8IUQ4|SIAH1_HUMAN E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1
SV=2
Length = 282
Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust.
Identities = 214/277 (77%), Positives = 240/277 (86%), Gaps = 8/277 (2%)
Query: 21 VGSKKHGPGNGLNNISPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVC 80
G+ K P + ++ +++SN+ DLASLFECPVCFDYVLPPI+QCQSGHLVC
Sbjct: 11 TGTSKCPPSQRVPALTGTTASNN--------DLASLFECPVCFDYVLPPILQCQSGHLVC 62
Query: 81 SNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCE 140
SNCRPKL+CCPTCRGPLG+IRNLAMEKVA ++ FPC+Y +GC I+L HTEK +HE+ CE
Sbjct: 63 SNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCE 122
Query: 141 HRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQ 200
RPY CPCPGASCKW G+LD VM HL HKSITTLQGEDIVFLATDINLPGAVDWVMMQ
Sbjct: 123 FRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQ 182
Query: 201 SCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRS 260
SCFG HFMLVLEKQEK+DGHQ FFAIVQLIG+RKQ+ENF YRLELNGHRRRLTWEATPRS
Sbjct: 183 SCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRS 242
Query: 261 IHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTI 297
IHEG+A+AIMNSDCLVFDT+IAQLFA+NGNLGINVTI
Sbjct: 243 IHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTI 279
>sp|Q06985|SIA1B_MOUSE E3 ubiquitin-protein ligase SIAH1B OS=Mus musculus GN=Siah1b PE=2
SV=2
Length = 282
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/278 (76%), Positives = 240/278 (86%), Gaps = 8/278 (2%)
Query: 21 VGSKKHGPGNGLNNISPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVC 80
G+ K P + ++ +++SN+ DLASLFECPVCFDYVLPPI+QCQSGHLVC
Sbjct: 11 TGTSKCPPSQRVPALTDTTASNN--------DLASLFECPVCFDYVLPPILQCQSGHLVC 62
Query: 81 SNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCE 140
SNCRPKL+CCPTCRGPLG+IRNLA+EKVA ++ FPC+Y +GC I+L HT+K EHE+ CE
Sbjct: 63 SNCRPKLTCCPTCRGPLGSIRNLAVEKVANSVLFPCKYSASGCEITLPHTKKAEHEELCE 122
Query: 141 HRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQ 200
RPY CPCPGASCKW G+LD VM HL HKSITTLQGEDIVFLATDINLPGAVDWVMMQ
Sbjct: 123 FRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQ 182
Query: 201 SCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRS 260
SCFG HFMLVLEKQEK+DGHQ FFAIVQLIG+RKQ+ENF YRLELNGHRRRLTWEATPRS
Sbjct: 183 SCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRS 242
Query: 261 IHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTIG 298
IHEG+A+AIMNSDCLVFDT+IAQLFA+NGNLGINVTI
Sbjct: 243 IHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTIS 280
>sp|Q8I147|SINA_DROWI E3 ubiquitin-protein ligase sina OS=Drosophila willistoni GN=sina
PE=3 SV=1
Length = 331
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/254 (83%), Positives = 225/254 (88%)
Query: 47 AGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAME 106
AG S DL SLFECPVCFDYVLPPI+QC SGHLVC +CR KL+CCPTCRGPL NIRNLAME
Sbjct: 78 AGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAME 137
Query: 107 KVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHL 166
KVA + FPC++ GC SL++TEK EHE+TCE RPYLCPCPGASCKW G LD VM HL
Sbjct: 138 KVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHL 197
Query: 167 NQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAI 226
SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK+DGHQ FFAI
Sbjct: 198 MMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAI 257
Query: 227 VQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA 286
VQLIGSRK++ENF YRLELNG+RRRLTWEA PRSIHEGVASAI NSDCLVFDT+IAQLFA
Sbjct: 258 VQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFA 317
Query: 287 DNGNLGINVTIGTV 300
DNGNLGINVTI V
Sbjct: 318 DNGNLGINVTISLV 331
>sp|P21461|SINA_DROME E3 ubiquitin-protein ligase sina OS=Drosophila melanogaster GN=sina
PE=1 SV=2
Length = 314
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/254 (83%), Positives = 225/254 (88%)
Query: 47 AGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAME 106
AG S DL SLFECPVCFDYVLPPI+QC SGHLVC +CR KL+CCPTCRGPL NIRNLAME
Sbjct: 61 AGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAME 120
Query: 107 KVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHL 166
KVA + FPC++ GC SL++TEK EHE+TCE RPYLCPCPGASCKW G LD VM HL
Sbjct: 121 KVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHL 180
Query: 167 NQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAI 226
SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK+DGHQ FFAI
Sbjct: 181 MMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAI 240
Query: 227 VQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA 286
VQLIGSRK++ENF YRLELNG+RRRLTWEA PRSIHEGVASAI NSDCLVFDT+IAQLFA
Sbjct: 241 VQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFA 300
Query: 287 DNGNLGINVTIGTV 300
DNGNLGINVTI V
Sbjct: 301 DNGNLGINVTISLV 314
>sp|P61093|SINA_DROER E3 ubiquitin-protein ligase sina OS=Drosophila erecta GN=sina PE=3
SV=1
Length = 314
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/254 (83%), Positives = 225/254 (88%)
Query: 47 AGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAME 106
AG S DL SLFECPVCFDYVLPPI+QC SGHLVC +CR KL+CCPTCRGPL NIRNLAME
Sbjct: 61 AGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAME 120
Query: 107 KVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHL 166
KVA + FPC++ GC SL++TEK EHE+TCE RPYLCPCPGASCKW G LD VM HL
Sbjct: 121 KVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHL 180
Query: 167 NQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAI 226
SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK+DGHQ FFAI
Sbjct: 181 MMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAI 240
Query: 227 VQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA 286
VQLIGSRK++ENF YRLELNG+RRRLTWEA PRSIHEGVASAI NSDCLVFDT+IAQLFA
Sbjct: 241 VQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFA 300
Query: 287 DNGNLGINVTIGTV 300
DNGNLGINVTI V
Sbjct: 301 DNGNLGINVTISLV 314
>sp|P29304|SINA_DROVI E3 ubiquitin-protein ligase sina OS=Drosophila virilis GN=sina PE=3
SV=1
Length = 314
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/254 (82%), Positives = 225/254 (88%)
Query: 47 AGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAME 106
AG S DL SLFECPVCFDYVLPPI+QC SGHLVC +CR KL+CCPTCRGPL NIRNLAME
Sbjct: 61 AGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAME 120
Query: 107 KVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHL 166
+VA + FPC++ GC SL++TEK EHE+TCE RPYLCPCPGASCKW G LD VM HL
Sbjct: 121 EVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHL 180
Query: 167 NQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAI 226
SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK+DGHQ FFAI
Sbjct: 181 MMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAI 240
Query: 227 VQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA 286
VQLIGSRK++ENF YRLELNG+RRRLTWEA PRSIHEGVASAI NSDCLVFDT+IAQLFA
Sbjct: 241 VQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFA 300
Query: 287 DNGNLGINVTIGTV 300
DNGNLGINVTI V
Sbjct: 301 DNGNLGINVTISLV 314
>sp|Q7SYL3|SIAH2_DANRE E3 ubiquitin-protein ligase Siah2 OS=Danio rerio GN=siah2l PE=2
SV=2
Length = 331
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/252 (80%), Positives = 226/252 (89%), Gaps = 1/252 (0%)
Query: 48 GTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAME 106
G S +L +LFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRGPL +IRNLAME
Sbjct: 78 GQSPELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIRNLAME 137
Query: 107 KVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHL 166
KVA T+ FPC+Y GC +SL H+EKPEHE+ CE RPY CPCPGASCKW G+L++VM HL
Sbjct: 138 KVASTLPFPCKYSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEEVMPHL 197
Query: 167 NQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAI 226
+HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAI
Sbjct: 198 MHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAI 257
Query: 227 VQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA 286
V LIG+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GVA+AIMNSDCLVFDT+IA LFA
Sbjct: 258 VLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHLFA 317
Query: 287 DNGNLGINVTIG 298
DNGNLGINVTI
Sbjct: 318 DNGNLGINVTIS 329
>sp|Q8R4T2|SIAH2_RAT E3 ubiquitin-protein ligase SIAH2 OS=Rattus norvegicus GN=Siah2
PE=1 SV=2
Length = 325
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/249 (81%), Positives = 223/249 (89%), Gaps = 1/249 (0%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRG L +IRNLAMEKVA
Sbjct: 74 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVAS 133
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+HL +H
Sbjct: 134 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAH 193
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 194 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 253
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GVA+AIMNSDCLVFDT IA LFADNGN
Sbjct: 254 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIAHLFADNGN 313
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 314 LGINVTIST 322
>sp|Q06986|SIAH2_MOUSE E3 ubiquitin-protein ligase SIAH2 OS=Mus musculus GN=Siah2 PE=1
SV=2
Length = 325
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/249 (81%), Positives = 223/249 (89%), Gaps = 1/249 (0%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRG L +IRNLAMEKVA
Sbjct: 74 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVAS 133
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+HL +H
Sbjct: 134 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAH 193
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 194 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 253
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GVA+AIMNSDCLVFDT IA LFADNGN
Sbjct: 254 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIAHLFADNGN 313
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 314 LGINVTIST 322
>sp|O43255|SIAH2_HUMAN E3 ubiquitin-protein ligase SIAH2 OS=Homo sapiens GN=SIAH2 PE=1
SV=1
Length = 324
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/249 (81%), Positives = 223/249 (89%), Gaps = 1/249 (0%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRG L +IRNLAMEKVA
Sbjct: 73 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVAS 132
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+HL +H
Sbjct: 133 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAH 192
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 193 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 252
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GVA+AIMNSDCLVFDT IA LFADNGN
Sbjct: 253 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIAHLFADNGN 312
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 313 LGINVTIST 321
>sp|Q9I8X5|SIAH2_XENLA E3 ubiquitin-protein ligase siah2 OS=Xenopus laevis GN=siah2 PE=2
SV=1
Length = 313
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/249 (80%), Positives = 219/249 (87%), Gaps = 1/249 (0%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCR L +IRNLAMEKVA
Sbjct: 62 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRASLTPSIRNLAMEKVAS 121
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC +SL HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM HL SH
Sbjct: 122 AVLFPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLENVMQHLTHSH 181
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQ CF HHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 182 KSITTLQGEDIVFLATDINLPGAVDWVMMQYCFNHHFMLVLEKQEKYEGHQQFFAIVLLI 241
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+EN+ YRLELNG+RRRLTWEATPRSIH+GVA+AIMNSDCLVFDT IA LFADNGN
Sbjct: 242 GTRKQAENYAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIAHLFADNGN 301
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 302 LGINVTIST 310
>sp|Q86MW9|SINA_SCHMA E3 ubiquitin-protein ligase sina OS=Schistosoma mansoni GN=SINA
PE=1 SV=1
Length = 371
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/267 (71%), Positives = 217/267 (81%), Gaps = 6/267 (2%)
Query: 34 NISPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTC 93
NI P ++S+SS S DLASLFECPVC DY LPPI+QCQSGH+VC++CR KLS CPTC
Sbjct: 106 NILPHNTSDSS-----SIDLASLFECPVCMDYALPPIMQCQSGHIVCASCRSKLSSCPTC 160
Query: 94 RGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASC 153
RG L NIRNLAMEK+A ++ FPC+Y +GC + +T K EHE CE+RPY CPCPGASC
Sbjct: 161 RGNLDNIRNLAMEKLASSVLFPCKYSTSGCPETFHYTSKSEHEAACEYRPYDCPCPGASC 220
Query: 154 KWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEK 213
KW G L+QVM HL HKSITTLQGEDIVFLATDI+LPGAVDWVMMQSCFGH FMLVLEK
Sbjct: 221 KWLGELEQVMPHLVHHHKSITTLQGEDIVFLATDISLPGAVDWVMMQSCFGHSFMLVLEK 280
Query: 214 QEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSD 273
QE+ Q FFA+VQLIG+RKQ++ F YRLELNGHRRRLTWEA PRSIH+GV SAI SD
Sbjct: 281 QERVPD-QIFFALVQLIGTRKQADQFVYRLELNGHRRRLTWEACPRSIHDGVQSAIAVSD 339
Query: 274 CLVFDTNIAQLFADNGNLGINVTIGTV 300
CLVFD+N A FA+NGNLGINVTI V
Sbjct: 340 CLVFDSNTAHSFAENGNLGINVTISQV 366
>sp|A8X679|SIAH1_CAEBR E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis briggsae
GN=siah-1 PE=3 SV=2
Length = 434
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 176/275 (64%), Positives = 220/275 (80%), Gaps = 3/275 (1%)
Query: 29 GNGLNNISPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLS 88
+ +++P + + +S ++ S+FECPVC +Y+LPP +QC SGHLVCSNCRPKL
Sbjct: 141 AQAMQSVAPHIPIVGAGADDSSAEILSVFECPVCLEYMLPPYMQCPSGHLVCSNCRPKLQ 200
Query: 89 CCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPC 148
CCPTCRGP ++RNL +EK+A T+ FPC++ +GC ++ H +K +HE+ CE+RPY CPC
Sbjct: 201 CCPTCRGPTPSVRNLGLEKIANTVRFPCKFSNSGCPLNFHHIDKMDHEELCEYRPYSCPC 260
Query: 149 PGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFM 208
PGASCKW GAL VM HL + HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCF ++FM
Sbjct: 261 PGASCKWQGALADVMDHLKKVHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFDYNFM 320
Query: 209 LVLEKQEKFD---GHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGV 265
LVLEKQEK+D Q F+A+VQLIGS+K+++NF YRLEL+ +RRR++WEATPRSIHEGV
Sbjct: 321 LVLEKQEKYDPAQSTQMFYAVVQLIGSKKEADNFVYRLELSANRRRMSWEATPRSIHEGV 380
Query: 266 ASAIMNSDCLVFDTNIAQLFADNGNLGINVTIGTV 300
A AI SDCL FDT+ AQLFA+NGNLGINVTI +
Sbjct: 381 AFAIQQSDCLAFDTSAAQLFAENGNLGINVTISRI 415
>sp|Q965X6|SIAH1_CAEEL E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis elegans
GN=siah-1 PE=1 SV=3
Length = 419
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 174/255 (68%), Positives = 209/255 (81%), Gaps = 3/255 (1%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
+S ++ S+FECPVC +Y+LPP +QC SGHLVCSNCRPKL CCPTCRGP ++RNL +EK+
Sbjct: 146 SSAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKI 205
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A T+ FPC++ +GC ++ H +K EHE+ CE RPY CPCPGASCKW G L VM HL +
Sbjct: 206 ANTVRFPCKFSTSGCPLNFHHADKTEHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLKK 265
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGH---QHFFA 225
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCF ++FMLVLEKQEK+D Q F+A
Sbjct: 266 IHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFDYNFMLVLEKQEKYDPAQPTQMFYA 325
Query: 226 IVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLF 285
+VQLIGS+K+++NF YRLEL+ RRR++WEATPRSIHEGV AI SDCL FD+N AQLF
Sbjct: 326 VVQLIGSKKEADNFVYRLELSASRRRMSWEATPRSIHEGVVVAIQQSDCLAFDSNAAQLF 385
Query: 286 ADNGNLGINVTIGTV 300
A+NGNLGINVTI +
Sbjct: 386 AENGNLGINVTISRI 400
>sp|Q8T3Y0|SINAL_DROME Probable E3 ubiquitin-protein ligase sinah OS=Drosophila
melanogaster GN=sinah PE=1 SV=2
Length = 351
Score = 268 bits (686), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 179/303 (59%), Gaps = 17/303 (5%)
Query: 14 PNHTVGIVGSKKHGP-GNGLNNISPSSSSNS--------------SNSAGTSTD-LASLF 57
P T +V K+ P + PS +S + +G D L +L
Sbjct: 45 PEETTHVVVVKRQSPDAAAAGELVPSRRKDSVAVQSGIVATGPLDTTRSGARDDFLMALL 104
Query: 58 ECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFPCR 117
ECPVCF Y++PPI+QC GHL+CS CR KL+ CP CR + NIR+LAMEKVA + FPC+
Sbjct: 105 ECPVCFGYIMPPIMQCPRGHLICSTCRSKLTICPVCRVFMTNIRSLAMEKVASKLIFPCK 164
Query: 118 YQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQ 177
+ GC L + EK +HE+ CE RPY CP P C W G L V HL SH+++ T++
Sbjct: 165 HSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSSHENVITME 224
Query: 178 GEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSE 237
G DI+FLAT++NL GA+DW M+QSC G HF+L LEK + Q +F ++IGS K +
Sbjct: 225 GNDIIFLATNVNLEGALDWTMVQSCHGRHFLLSLEKINLGEDCQQYFTACRMIGSMKDAA 284
Query: 238 NFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTI 297
F Y + L + R L W++ PRSI E S+ N+D LV + + +LF+++GNL +NV I
Sbjct: 285 EFVYNISLEAYNRTLRWQSKPRSIRENF-SSFTNADFLVLNKHTVELFSEDGNLALNVVI 343
Query: 298 GTV 300
V
Sbjct: 344 RKV 346
>sp|Q8IW03|SIAH3_HUMAN Seven in absentia homolog 3 OS=Homo sapiens GN=SIAH3 PE=2 SV=3
Length = 269
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 143 PYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSC 202
P LC CP SC+W G L+ V+ HL Q H+ + LQG +IVFLATD++LP DW++M SC
Sbjct: 104 PCLCMCPLFSCQWEGRLEVVVPHLRQIHR-VDILQGAEIVFLATDMHLPAPADWIIMHSC 162
Query: 203 FGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIH 262
GHHF+LVL KQE+ +GH FFA + LIG+ Q++ FTYRLELN + RRL WEATPRS+
Sbjct: 163 LGHHFLLVLRKQERHEGHPQFFATMMLIGTPTQADCFTYRLELNRNHRRLKWEATPRSVL 222
Query: 263 EGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTI 297
E V S I + DCLV +T++AQLF+DNG+L I + I
Sbjct: 223 ECVDSVITDGDCLVLNTSLAQLFSDNGSLAIGIAI 257
>sp|Q9M2P4|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana
GN=SINAT2 PE=2 SV=1
Length = 308
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 138/268 (51%), Gaps = 10/268 (3%)
Query: 36 SPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCR 94
P S+ ++ + L ECPVC + + PPI QC +GH +CSNC+ ++ + CPTCR
Sbjct: 37 KPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCR 96
Query: 95 GPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCK 154
LGNIR LA+EKVA ++ PCRYQ GC + K +HE C RPY CP G+ C
Sbjct: 97 YELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECS 156
Query: 155 WGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLPGAVD---WVM-MQSCFGHHFMLV 210
G + ++ HL HK + G N P V+ W++ + +CFG F L
Sbjct: 157 VTGDIPTLVVHLKDDHK-VDMHDGCTFNHRYVKSN-PHEVENATWMLTVFNCFGRQFCLH 214
Query: 211 LEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIM 270
E + + A ++ +G +++ F+Y LE+ H R+LTW+ PRSI +
Sbjct: 215 FEAFQ-LGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRD 273
Query: 271 NSDCLVFDTNIAQLFA--DNGNLGINVT 296
+ D L+ N+A F+ D L + VT
Sbjct: 274 SQDGLIIPRNLALYFSGGDRQELKLRVT 301
>sp|P93748|SINA1_ARATH Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana
GN=SINAT1 PE=3 SV=1
Length = 305
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 139/271 (51%), Gaps = 10/271 (3%)
Query: 33 NNISPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCP 91
N+ S S S +S + L ECPVC + + PPI QC +GH +CS+C+ ++ + CP
Sbjct: 31 NSKPTKSGSGSIGKFHSSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCP 90
Query: 92 TCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGA 151
TCR LGNIR LA+EKVA ++ PCRYQ GC + K +HE C R Y CP G+
Sbjct: 91 TCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGS 150
Query: 152 SCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLPGAVD---WVM-MQSCFGHHF 207
C G + ++ HL HK + G N P V+ W++ + +CFG F
Sbjct: 151 ECSVTGDIPTLVDHLKDDHK-VDMHDGCTFNHRYVKSN-PHEVENATWMLTVFNCFGRQF 208
Query: 208 MLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVAS 267
L E + + A ++ +G +++ F+Y LE+ H R+LTW+ PRSI +
Sbjct: 209 CLHFEAFQ-LGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRK 267
Query: 268 AIMNSDCLVFDTNIAQLF--ADNGNLGINVT 296
+ D L+ N+A F +D L + VT
Sbjct: 268 VRDSQDGLIIPRNLALYFSGSDKEELKLRVT 298
>sp|Q8S3N1|SINA5_ARATH E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana
GN=SINAT5 PE=1 SV=2
Length = 309
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 138/266 (51%), Gaps = 6/266 (2%)
Query: 36 SPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCR 94
S S ++ +T + L ECPVC + + PPI QC +GH +CS C+ ++ + CPTCR
Sbjct: 23 STKSQGGATVVISPATSVYELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCR 82
Query: 95 GPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCK 154
LG+IR LA+EKVA ++ PC+Y GC + K +HE C RPY CP G+ C
Sbjct: 83 QELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECA 142
Query: 155 WGGALDQVMAHLNQSHK-SITTLQGEDIVFLATDINLPGAVDWVM-MQSCFGHHFMLVLE 212
G + ++AHL HK + T + ++ ++ W++ + CFG +F L E
Sbjct: 143 AVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFE 202
Query: 213 KQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNS 272
+ + A ++ +G + N+TY LE+ G R+ TWE TPRS+ + +
Sbjct: 203 AFQ-LGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSH 261
Query: 273 DCLVFDTNIAQLFA--DNGNLGINVT 296
D L+ N+A F+ D L + VT
Sbjct: 262 DGLIIQRNMALFFSGGDKKELKLRVT 287
>sp|Q84JL3|SINA3_ARATH E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana
GN=SINAT3 PE=2 SV=1
Length = 326
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 135/255 (52%), Gaps = 10/255 (3%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEK 107
T+T + L ECPVC + + PPI QC +GH +CS C+ ++ + CPTCR LG+IR LA+EK
Sbjct: 53 TTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEK 112
Query: 108 VAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLN 167
VA ++ PC++ GC + K +HE C RPY CP G+ C G + ++AHL
Sbjct: 113 VAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLR 172
Query: 168 QSHKSITTLQGEDIVFLATDINLPGAVD---WVM-MQSCFGHHFMLVLEKQEKFDGHQHF 223
HK + G N P V+ W++ + CFG +F L E + +
Sbjct: 173 DDHK-VDMHSGCTFNHRYVKSN-PREVENATWMLTVFHCFGQYFCLHFEAFQ-LGMAPVY 229
Query: 224 FAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQ 283
A ++ +G ++ N+ Y LE+ G+ R+L WE TPRS+ + + D L+ N+A
Sbjct: 230 MAFLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMAL 289
Query: 284 LFA--DNGNLGINVT 296
F+ D L + VT
Sbjct: 290 FFSGGDRKELKLRVT 304
>sp|Q9STN8|SINA4_ARATH E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana
GN=SINAT4 PE=2 SV=1
Length = 327
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 153/308 (49%), Gaps = 24/308 (7%)
Query: 10 VDSNPNHTVGIVGSKKHGPGNGLNNISPSSSSNSS--------------NSAGTSTDLAS 55
++++ V G++ H GNG + SS+ + +T +
Sbjct: 1 METDSMECVSSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYE 60
Query: 56 LFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEKVAGTMWF 114
L ECPVC + PPI QC +GH +CS C+ ++ + CPTCR LG+IR LA+EKVA ++
Sbjct: 61 LLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLEL 120
Query: 115 PCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSIT 174
PC++ GC + K +HE C RPY CP G+ C G + ++AHL HK +
Sbjct: 121 PCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHK-VD 179
Query: 175 TLQGEDIVFLATDINLPGAVD---WVM-MQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
G N P V+ W++ + CFG +F L E + G + A ++ +
Sbjct: 180 MHAGSTFNHRYVKSN-PREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPV-YMAFLRFM 237
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA--DN 288
G + + +++Y LE+ G R+LTWE TPRSI + ++D L+ N+A F+ D
Sbjct: 238 GDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDR 297
Query: 289 GNLGINVT 296
L + VT
Sbjct: 298 KELKLRVT 305
>sp|Q9FKD9|SINL6_ARATH Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis
thaliana GN=At5g37870 PE=3 SV=1
Length = 281
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 121/245 (49%), Gaps = 19/245 (7%)
Query: 18 VGIVGSKKHGPGNG-LNNISPSSSSNSSNSAGTS--TDLASLFECPVCFDYVLPPIIQCQ 74
VG++ S+++G ++IS + ++ TDL + +CP+C+ + P+ QC
Sbjct: 2 VGVLLSERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDL-DILDCPICYQALKIPVFQCG 60
Query: 75 SGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKP 133
+GHL CS+C PKL + CP C P+G+IR AME+V ++ PCRY GC ++ + +
Sbjct: 61 NGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRES 120
Query: 134 EHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGED-IVFLATDINLPG 192
HE C P C CP C + G+ + H + +H + +T + + ++A + +
Sbjct: 121 THEKICNFSP--CSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFIS- 177
Query: 193 AVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRL 252
D ++++ + + V++ E+ G + ++ + S + F+Y L
Sbjct: 178 --DKILIERVYEKKLLFVVQCFEEPCG--VYVSVSCIAPSAPEVGEFSYGLLYT------ 227
Query: 253 TWEAT 257
TWE
Sbjct: 228 TWEGV 232
>sp|Q9FKD5|SINL9_ARATH Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis
thaliana GN=At5g37910 PE=3 SV=1
Length = 276
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 41 SNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLS-CCPTCRGPLGN 99
+ SA DL + +CP+C + + PI QC +GHL C +C PKLS CP C P+G+
Sbjct: 21 AKRQRSAIVLLDL-DILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGH 79
Query: 100 IRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGAL 159
R+ AME V ++ PC GC S + ++ HE C C CP + C + G+
Sbjct: 80 SRSRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQ--CSCPSSVCDYTGSY 137
Query: 160 DQVMAHLNQSHKS 172
+ AH +H +
Sbjct: 138 KDLYAHYKLTHST 150
>sp|Q9FM14|SIL11_ARATH E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana
GN=At5g62800 PE=2 SV=2
Length = 314
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 16/208 (7%)
Query: 56 LFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLS-CCPT--CRGPLGNIRNLAMEKVAGTM 112
+ +CPVCF+ + P QC GH+VC+ C K+S CP C P+GN R AME+V +
Sbjct: 40 VLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESA 99
Query: 113 WFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKS 172
+ PC+ GC S+ + + HE C + C CP C + G+ + + H + H
Sbjct: 100 FVPCQNTEFGCTKSVSYEKVSSHEKECNYS--QCSCPNLECNYTGSYNIIYGHFMRRHLY 157
Query: 173 ITTLQ----GEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
+T+ G V + +I +V W Q L+ Q + H + + +
Sbjct: 158 NSTIVSSKWGYSTVDVLINIKEKVSVLWESRQK-------LLFVVQCFKERHGVYVTVRR 210
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEA 256
+ + + F+YRL + +T+E+
Sbjct: 211 IAPPASEFKKFSYRLSYSIDGHNVTYES 238
>sp|Q9FKD7|SINL7_ARATH E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana
GN=At5g37890 PE=2 SV=1
Length = 286
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 18 VGIVGSKKHGPGNGLNNISPSSSSNSSNSAGT------STDLASL--FECPVCFDYVLPP 69
VG + G G G N+I SS+ A ST L L +CP+C++ P
Sbjct: 2 VGAAILESPGEGIGSNSILSQKRQLSSSDAAKRDAKKRSTMLMDLEILDCPICYEAFTIP 61
Query: 70 IIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLL 128
I QC +GHL CS+C PKL + CP C P+G+ R AME V ++ PC GC ++
Sbjct: 62 IFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVS 121
Query: 129 HTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTL 176
+ ++ HE C C CP C + + + H +H I +
Sbjct: 122 YGKELTHEKECMFSH--CACPALDCNYTSSYKDLYTHYRITHMEINQI 167
>sp|Q9C6H3|SINL2_ARATH E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana
GN=At1g66620 PE=2 SV=1
Length = 313
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 9/141 (6%)
Query: 37 PSSSSNSSNSAGTSTDLA-SLFE-----CPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SC 89
PSS + N G + + +LFE CP+C + PI QC +GH+ CS+C KL +
Sbjct: 16 PSSVESVENGGGDAVARSGTLFELDLLDCPICCHALTSPIFQCDNGHIACSSCCTKLRNK 75
Query: 90 CPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCP 149
CP+C P+GN R+ ME+V + C +GC + ++ HE C R LC CP
Sbjct: 76 CPSCALPIGNFRSRIMERVVEAVMVTCPNVKHGCTEKFSYGKELIHEKDC--RFALCYCP 133
Query: 150 GASCKWGGALDQVMAHLNQSH 170
+C + G + +H +H
Sbjct: 134 APNCNYSGVYKDLYSHFYVNH 154
>sp|Q9C9M0|SINL4_ARATH E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana
GN=At1g66650 PE=2 SV=1
Length = 329
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 54 ASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSC-CPTCRGPLGNIRNLAMEKVAGTM 112
+++ ECP CFD + PI QC +GHL C C KL C C+ P+G++R AMEKV
Sbjct: 81 SNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAMEKVIKAG 140
Query: 113 WFPCRYQMNGCGISLLHTEKPE-HEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHK 171
C + GC S + + + HE C P C CP C + G ++ H +HK
Sbjct: 141 LVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAP--CSCPIKDCNYIGFYKDLINHFRATHK 198
>sp|Q9C6H2|SINL3_ARATH E3 ubiquitin-protein ligase SINA-like 3 OS=Arabidopsis thaliana
GN=At1g66630 PE=2 SV=1
Length = 303
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 31 GLNNISPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSC- 89
+ N+ ++S + + T +L L +CP+C+ + PI QC +GH+ CS+C K+
Sbjct: 22 SMENVGGTASGSEVARSATLLEL-DLLDCPICYHKLGAPIYQCDNGHIACSSCCKKVKYK 80
Query: 90 CPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPE--HEDTCEHRPYLCP 147
CP C +G R+ +EK+ + C GC + + + E HE CE LC
Sbjct: 81 CPYCSLRIGFFRSRILEKIVEAVVVSCPNAKYGCTEKIPYDNESESAHERVCEFT--LCY 138
Query: 148 CPGASCKWGGALDQVMAHLNQSHKS 172
CP CK+ G + H + HK+
Sbjct: 139 CPEPECKYTGVYTDLYRHYHAEHKT 163
>sp|Q84K34|SIL10_ARATH E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana
GN=At5g37930 PE=2 SV=1
Length = 349
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 56 LFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEKVAGTMWF 114
+ +CP+C + + PI QC +GHL C+ C K+ + CP+C P+G +R AMEKV
Sbjct: 110 VLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRV 169
Query: 115 PCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHK 171
C GC S + + HE C P C CP C + G + H+ HK
Sbjct: 170 SCLNAKYGCKESTSYGNRFSHEQVCVFTP--CSCPILDCHYTGYYKDLNNHVRAEHK 224
>sp|Q9FKD6|SINL8_ARATH E3 ubiquitin-protein ligase SINA-like 8 OS=Arabidopsis thaliana
GN=At5g37900 PE=1 SV=2
Length = 263
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 47 AGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAM 105
+ T DL + +CP+C + + PI QC++GHL CS+C PKL + CP C M
Sbjct: 24 SATLLDL-DILDCPICCEGLTCPIFQCENGHLACSSCCPKLRNKCPAC----------PM 72
Query: 106 EKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAH 165
E + ++ C M GC S L+ +K HE+ C LC CP C++ G + + H
Sbjct: 73 ENILESILVTCPNDMFGCTESFLYGKKSTHEEECIFS--LCSCPSLDCEYSGRYEDLYDH 130
Query: 166 LNQSHKS 172
+H S
Sbjct: 131 YKLTHIS 137
>sp|Q7XA77|SINL5_ARATH E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana
GN=At1g66660 PE=2 SV=2
Length = 328
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 33 NNISPSSSSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLS-CCP 91
N + S + +S + + +CP C + + PI QC +GHL CS+C KL+ C
Sbjct: 60 NVTTDEQSGSPKSSQPVKLQSSDVLDCPTCCEPLKRPIYQCSNGHLACSSCCQKLNKKCS 119
Query: 92 TCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGA 151
CR +G+IR AMEKV PC +GC + + + HE C+ C CP +
Sbjct: 120 FCRCNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTTYCNQSSHEKVCKF--VRCSCPVS 177
Query: 152 SCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDINLP 191
+C + + + +H S + GED + I+ P
Sbjct: 178 NCNYVSSYSNLKSHAC----STAHVWGEDDIHFQLVIDRP 213
>sp|Q9VZV5|CYHR1_DROME Cysteine and histidine-rich protein 1 homolog OS=Drosophila
melanogaster GN=CG32486 PE=2 SV=2
Length = 412
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 59 CPVCFDYVLPPIIQCQSGHLVCSNC----------RPKLSCCPTCRGPLGN---IRNLAM 105
C VC D + QCQ GHL+C+ C R +++ CP CR + RNLA+
Sbjct: 113 CAVCLDLPKTAMYQCQMGHLMCAACFTHLLADGRLRDQIATCPNCRVEISKSTASRNLAV 172
Query: 106 EKVAGTMWFPCRYQMNGCGISLLHTEKPEHED-TCEHRPYLCPCPGASCKWGGALDQVMA 164
EK A + C++ C + HE C+ RP C C+W G +
Sbjct: 173 EKAASELPSECQF----CNKEFPYKSLERHEQHECQERPTKCKYHRIGCQWRGPYHETNE 228
Query: 165 H 165
H
Sbjct: 229 H 229
>sp|Q6GNX1|CYR1A_XENLA Cysteine and histidine-rich protein 1-A OS=Xenopus laevis
GN=cyhr1-a PE=2 SV=2
Length = 365
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 54/139 (38%), Gaps = 16/139 (11%)
Query: 40 SSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNC----------RPKLSC 89
S S L S+ C VC D + QC +GHL+C+ C + + +
Sbjct: 53 SEAEPGSVRLEERLYSVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLKEEQAT 112
Query: 90 CPTCRGPLGN---IRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLC 146
CP CR + RNLA+EK + C + + SLL K E C+ R C
Sbjct: 113 CPNCRCEISKSLCCRNLAVEKAVSELPSDCGFCLKQFPRSLLERHKKEE---CQDRVTQC 169
Query: 147 PCPGASCKWGGALDQVMAH 165
C W G ++ H
Sbjct: 170 KYKRIGCPWEGPYHELTVH 188
>sp|Q2TAD9|CYR1B_XENLA Cysteine and histidine-rich protein 1-B OS=Xenopus laevis
GN=cyhr1-b PE=2 SV=2
Length = 365
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 54/139 (38%), Gaps = 16/139 (11%)
Query: 40 SSNSSNSAGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNC----------RPKLSC 89
S S L S+ C VC D + QC +GHL+C+ C + + +
Sbjct: 53 SEAEPGSVRLEERLYSVLCCAVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQAT 112
Query: 90 CPTCRGPLGN---IRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLC 146
CP CR + RNLA+EK + C + + SLL K E C+ R C
Sbjct: 113 CPNCRCEISKSLCCRNLAVEKAISELPSDCGFCLKQFPRSLLERHKKEE---CQDRVTQC 169
Query: 147 PCPGASCKWGGALDQVMAH 165
C W G ++ H
Sbjct: 170 KYKRIGCPWQGPYHELTVH 188
>sp|Q08CH8|CYHR1_DANRE Cysteine and histidine-rich protein 1 OS=Danio rerio GN=cyhr1 PE=2
SV=1
Length = 375
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 53 LASLFECPVCFDYVLPPIIQCQSGHLVCSNC----------RPKLSCCPTCRGPLGN--- 99
L S+ C VC D + QC +GHL+C+ C + + + CP CR +
Sbjct: 76 LYSVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEISKSLC 135
Query: 100 IRNLAMEKVAGTMWFPCRY---QMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWG 156
RNLA+EK + C Y Q G+ TE+ C+ R C C W
Sbjct: 136 CRNLAVEKAVSELPSECSYCLKQFPRSGLDRHQTEE------CQDRVTQCKYKRIGCPWQ 189
Query: 157 GALDQVMAH 165
G ++ AH
Sbjct: 190 GPFHELSAH 198
>sp|Q9C6H4|SINL1_ARATH E3 ubiquitin-protein ligase SINA-like 1 OS=Arabidopsis thaliana
GN=At1g66610 PE=2 SV=1
Length = 366
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 47 AGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLS-CCPTCRGPLGNIRNLAM 105
+GT +L L +CP+C + + PI QC GH+ CS+C +S CP C +GN R+ M
Sbjct: 45 SGTLFEL-DLLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIM 103
Query: 106 EKVAGTMWFPC 116
E+V C
Sbjct: 104 ERVVEAFIVRC 114
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 119 QMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITT 175
+ NGC + + + HE C LC CP +C + G + +H +HK + T
Sbjct: 182 RQNGCTETFSYGNELVHEKKCSFA--LCYCPAPNCNYAGVYKDLYSHYAANHKKLWT 236
>sp|Q9QXA1|CYHR1_MOUSE Cysteine and histidine-rich protein 1 OS=Mus musculus GN=Cyhr1 PE=1
SV=1
Length = 311
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 71 IQCQSGHLVCSNC----------RPKLSCCPTCRGPLGN---IRNLAMEKVAGTMWFPCR 117
+QC +GHL+C+ C + + + CP CR + RNLA+EK + C
Sbjct: 30 VQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECG 89
Query: 118 YQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAH 165
+ + SLL + E C+ R C C W G ++ H
Sbjct: 90 FCLRQFPRSLLERHQKEE---CQDRVTQCKYKRIGCPWHGPFHELTVH 134
>sp|Q5BK76|CYHR1_RAT Cysteine and histidine-rich protein 1 OS=Rattus norvegicus GN=Cyhr1
PE=2 SV=2
Length = 311
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 71 IQCQSGHLVCSNC----------RPKLSCCPTCRGPLGN---IRNLAMEKVAGTMWFPCR 117
+QC +GHL+C+ C + + + CP CR + RNLA+EK + C
Sbjct: 30 VQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECG 89
Query: 118 YQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAH 165
+ + SLL + E C+ R C C W G ++ H
Sbjct: 90 FCLRQFPRSLLERHQKEE---CQDRVTQCKYKRIGCPWHGPFHELTVH 134
>sp|Q54FC5|Y0965_DICDI TNF receptor-associated factor family protein DDB_G0290965
OS=Dictyostelium discoideum GN=DDB_G0290965 PE=3 SV=1
Length = 575
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 57 FECPVCFDYVLPP-IIQCQSGHLVCSNCRPK----LSCCPTCRGPLGNI----RNLAMEK 107
+ CP+CF+++ I QC+SGH C C K C CR + +I R L +E+
Sbjct: 25 YSCPICFEFIYKKSIFQCKSGHFACKECWEKSLKIKKECMICRSKVNSINDLSRCLVIEQ 84
Query: 108 VAGTMWFPCRYQMNG 122
G C Y N
Sbjct: 85 GFGKKECYCIYSFNN 99
>sp|Q96AX9|MIB2_HUMAN E3 ubiquitin-protein ligase MIB2 OS=Homo sapiens GN=MIB2 PE=1 SV=3
Length = 1013
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 59 CPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPL 97
CP+C D + + QC GH C+ C LS CP CR P+
Sbjct: 969 CPICIDSHIRLVFQC--GHGACAPCGSALSACPICRQPI 1005
>sp|Q9ET26|RN114_MOUSE RING finger protein 114 OS=Mus musculus GN=Rnf114 PE=2 SV=2
Length = 229
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 37 PSSSSNSSNSA--GTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNC-----RPKLSC 89
P S ++ SA + TD S F CPVC + P +Q GH+ CS C +PK
Sbjct: 6 PESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKP-VQVPCGHVFCSACLQECLKPKKPV 64
Query: 90 CPTCRGPLG-NIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTC 139
C CR L +R + +E+ ++ C +GC + + ++ H +C
Sbjct: 65 CGVCRSALAPGVRAVELERQIESIETSC----HGCRKNFILSKIRAHVTSC 111
>sp|Q8R516|MIB2_MOUSE E3 ubiquitin-protein ligase MIB2 OS=Mus musculus GN=Mib2 PE=1 SV=2
Length = 973
Score = 42.0 bits (97), Expect = 0.006, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 59 CPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPL 97
CP+C D + + QC GH C+ C L+ CP CR P+
Sbjct: 929 CPICIDSHIRLVFQC--GHGACAPCGAALNACPICRQPI 965
>sp|Q68LP1|MIB2_RAT E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus GN=Mib2 PE=2
SV=2
Length = 971
Score = 41.6 bits (96), Expect = 0.006, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 59 CPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPL 97
CP+C D + + QC GH C+ C L+ CP CR P+
Sbjct: 927 CPICIDSHIRLVFQC--GHGACAPCGAALNACPICRQPI 963
>sp|Q557K0|Y3509_DICDI TNF receptor-associated factor family protein
DDB_G0273433/DDB_G0273509 OS=Dictyostelium discoideum
GN=DDB_G0273433 PE=3 SV=1
Length = 450
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 31/160 (19%)
Query: 49 TSTDLASLFECPVCFDYVLP--------PIIQCQSGHLVCSNC-RPKLSC---CPTCRG- 95
++D + F+C +CF+ V+ ++QC++GH+ C C +LS CP+C+
Sbjct: 16 VNSDDLTPFQCQICFNSVIDFKKETLSFDVLQCRNGHISCHECWNRQLSIKQECPSCKVK 75
Query: 96 --PLGNIRNLAMEKVAGTMWFPC-------RYQ------MNGCGISLLHTEKPEHE-DTC 139
P RN+ +E + C ++Q NGC +L E EH C
Sbjct: 76 TLPSELSRNIFLENAFRALKVICPNKFKESKFQGEAVHCENGCP-EILKVELLEHHLKEC 134
Query: 140 EHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGE 179
+++ CP CK+ +Q+ H NQS + +Q E
Sbjct: 135 QYQFIKCPNNSNKCKYIIRKNQIEHH-NQSVCDYSLIQCE 173
>sp|Q6J2U6|RN114_RAT RING finger protein 114 OS=Rattus norvegicus GN=Rnf114 PE=2 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 37 PSSSSNSSNSA--GTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNC-----RPKLSC 89
P S ++ SA + TD S F CPVC + P +Q GH+ CS C +PK
Sbjct: 6 PESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKP-VQVPCGHVFCSACLQECLKPKKPV 64
Query: 90 CPTCRGPLG-NIRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTC 139
C CR L +R +E+ ++ C +GC + ++ H +C
Sbjct: 65 CGVCRSALAPGVRAAELERQIESIETSC----HGCRKDFVLSKIRAHVASC 111
>sp|Q922B6|TRAF7_MOUSE E3 ubiquitin-protein ligase TRAF7 OS=Mus musculus GN=Traf7 PE=1
SV=1
Length = 594
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 21/111 (18%)
Query: 59 CPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNI-RNLAMEKVAGTMWFPCR 117
C +C P+I GH C C K CP L + N+A+ + G ++ CR
Sbjct: 55 CQLCCSVFKDPVIT-TCGHTFCRRCALKSEKCPVDNAKLTVVVNNIAVAEQIGELFIHCR 113
Query: 118 Y---------------QMNGCGISLLHTEKPEHEDTCEHRPYLCP----CP 149
+ GC ++ + + +HE +C++RP CP CP
Sbjct: 114 HGCHAAGTGKPGVFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP 164
>sp|Q6ZMK1|CYHR1_HUMAN Cysteine and histidine-rich protein 1 OS=Homo sapiens GN=CYHR1 PE=2
SV=2
Length = 362
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 16/106 (15%)
Query: 73 CQSGHLVCSNC----------RPKLSCCPTCRGPLGN---IRNLAMEKVAGTMWFPCRYQ 119
C +GHL+C+ C + + + CP CR + RNLA+EK + C +
Sbjct: 83 CTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFC 142
Query: 120 MNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAH 165
+ SLL + E C+ R C C W G ++ H
Sbjct: 143 LRQFPRSLLERHQKEE---CQDRVTQCKYKRIGCPWHGPFHELTVH 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,316,492
Number of Sequences: 539616
Number of extensions: 4831958
Number of successful extensions: 14269
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 14063
Number of HSP's gapped (non-prelim): 292
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)