Your job contains 1 sequence.
>psy12278
MLVKDMNKGVDSNPNHTVGIVGSKKHGPGNGLNNISPSSSSNSSNSAGTSTDLASLFECP
VCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQM
NGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGED
IVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFT
YRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTIGTV
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12278
(300 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:108064 - symbol:Siah1a "seven in absentia 1A" spe... 1174 2.9e-119 1
RGD|620449 - symbol:Siah1a "seven in absentia 1A" species... 1174 2.9e-119 1
UNIPROTKB|Q920M9 - symbol:Siah1 "E3 ubiquitin-protein lig... 1174 2.9e-119 1
UNIPROTKB|F1P2G0 - symbol:SIAH1 "Uncharacterized protein"... 1171 6.0e-119 1
UNIPROTKB|F1N5G3 - symbol:SIAH1 "Uncharacterized protein"... 1171 6.0e-119 1
UNIPROTKB|F1PEG8 - symbol:SIAH1 "Uncharacterized protein"... 1171 6.0e-119 1
UNIPROTKB|Q8IUQ4 - symbol:SIAH1 "E3 ubiquitin-protein lig... 1171 6.0e-119 1
ZFIN|ZDB-GENE-010319-31 - symbol:siah1 "seven in absentia... 1170 7.7e-119 1
MGI|MGI:108063 - symbol:Siah1b "seven in absentia 1B" spe... 1167 1.6e-118 1
FB|FBgn0003410 - symbol:sina "seven in absentia" species:... 1161 6.9e-118 1
UNIPROTKB|P61093 - symbol:sina "E3 ubiquitin-protein liga... 1161 6.9e-118 1
UNIPROTKB|Q8I147 - symbol:sina "E3 ubiquitin-protein liga... 1152 6.2e-117 1
UNIPROTKB|P29304 - symbol:sina "E3 ubiquitin-protein liga... 1148 1.6e-116 1
ZFIN|ZDB-GENE-030922-1 - symbol:siah2l "seven in absentia... 1129 2.3e-116 2
UNIPROTKB|O43255 - symbol:SIAH2 "E3 ubiquitin-protein lig... 1124 5.8e-114 1
MGI|MGI:108062 - symbol:Siah2 "seven in absentia 2" speci... 1124 5.8e-114 1
RGD|620778 - symbol:Siah2 "siah E3 ubiquitin protein liga... 1124 5.8e-114 1
UNIPROTKB|Q8R4T2 - symbol:Siah2 "E3 ubiquitin-protein lig... 1124 5.8e-114 1
UNIPROTKB|F1MBM6 - symbol:SIAH2 "Uncharacterized protein"... 1121 1.2e-113 1
UNIPROTKB|F1P937 - symbol:FAM194A "Uncharacterized protei... 1121 1.2e-113 1
UNIPROTKB|I3L8K6 - symbol:SIAH2 "Uncharacterized protein"... 1121 1.2e-113 1
UNIPROTKB|E1C3Q9 - symbol:SIAH2 "Uncharacterized protein"... 1100 2.0e-111 1
UNIPROTKB|F1N0S2 - symbol:Bt.105896 "Uncharacterized prot... 1044 1.7e-105 1
WB|WBGene00021369 - symbol:siah-1 species:6239 "Caenorhab... 995 2.7e-100 1
UNIPROTKB|Q965X6 - symbol:siah-1 "E3 ubiquitin-protein li... 995 2.7e-100 1
UNIPROTKB|G3X7V0 - symbol:G3X7V0 "Uncharacterized protein... 935 6.1e-94 1
UNIPROTKB|F1NFK4 - symbol:SIAH1 "Uncharacterized protein"... 903 1.5e-90 1
FB|FBgn0259794 - symbol:sinah "sina homologue" species:72... 677 1.3e-66 1
UNIPROTKB|F1NXB7 - symbol:F1NXB7 "Uncharacterized protein... 498 1.2e-47 1
UNIPROTKB|Q8IW03 - symbol:SIAH3 "Seven in absentia homolo... 479 1.3e-45 1
UNIPROTKB|F1PLU4 - symbol:SIAH3 "Uncharacterized protein"... 473 5.6e-45 1
UNIPROTKB|J9NYA3 - symbol:SIAH3 "Uncharacterized protein"... 473 5.6e-45 1
RGD|2324160 - symbol:LOC100366198 "seven in absentia homo... 469 1.5e-44 1
TAIR|locus:2095848 - symbol:SINAT2 "seven in absentia of ... 414 9.9e-39 1
TAIR|locus:2076810 - symbol:AT3G61790 species:3702 "Arabi... 407 5.5e-38 1
TAIR|locus:2137395 - symbol:AT4G27880 species:3702 "Arabi... 406 7.0e-38 1
TAIR|locus:2064642 - symbol:AT2G41980 species:3702 "Arabi... 402 1.9e-37 1
UNIPROTKB|C9J9D7 - symbol:SIAH2 "E3 ubiquitin-protein lig... 348 9.8e-32 1
UNIPROTKB|H3BU09 - symbol:SIAH1 "E3 ubiquitin-protein lig... 342 4.2e-31 1
TAIR|locus:2153804 - symbol:AT5G37870 species:3702 "Arabi... 253 1.1e-21 1
TAIR|locus:2153774 - symbol:AT5G37910 species:3702 "Arabi... 228 5.1e-19 1
TAIR|locus:2195175 - symbol:AT1G66620 species:3702 "Arabi... 219 4.6e-18 1
TAIR|locus:2153754 - symbol:AT5G37890 species:3702 "Arabi... 217 7.5e-18 1
TAIR|locus:2153784 - symbol:AT5G37930 species:3702 "Arabi... 197 4.5e-15 2
TAIR|locus:2033369 - symbol:AT1G66650 species:3702 "Arabi... 200 1.1e-14 1
TAIR|locus:2195180 - symbol:AT1G66630 species:3702 "Arabi... 196 2.8e-14 1
TAIR|locus:2033354 - symbol:AT1G66660 species:3702 "Arabi... 196 6.2e-14 1
TAIR|locus:2091581 - symbol:SINA2 "AT3G13672" species:370... 177 1.8e-13 1
FB|FBgn0024997 - symbol:CG2681 species:7227 "Drosophila m... 192 9.1e-13 1
TAIR|locus:2195170 - symbol:AT1G66610 species:3702 "Arabi... 136 2.3e-11 2
FB|FBgn0052486 - symbol:CG32486 species:7227 "Drosophila ... 146 1.4e-07 1
FB|FBgn0085404 - symbol:CG34375 species:7227 "Drosophila ... 150 1.5e-07 2
RGD|2318728 - symbol:Cyhr1 "cysteine/histidine-rich 1" sp... 135 2.1e-06 1
ZFIN|ZDB-GENE-060929-720 - symbol:zgc:153061 "zgc:153061"... 135 2.2e-06 1
UNIPROTKB|E9PJD7 - symbol:CYHR1 "Cysteine and histidine-r... 135 2.5e-06 1
UNIPROTKB|E2R758 - symbol:CYHR1 "Uncharacterized protein"... 135 2.5e-06 1
FB|FBgn0039038 - symbol:CG6688 species:7227 "Drosophila m... 130 1.0e-05 1
UNIPROTKB|Q2TBT8 - symbol:RNF151 "RING finger protein 151... 112 0.00035 1
UNIPROTKB|Q6J211 - symbol:RNF114 "Uncharacterized protein... 111 0.00038 1
MGI|MGI:1859320 - symbol:Cyhr1 "cysteine and histidine ri... 113 0.00049 1
RGD|1561328 - symbol:RGD1561328 "cysteine and histidine r... 113 0.00049 1
DICTYBASE|DDB_G0347550 - symbol:DDB_G0347550 species:4468... 119 0.00065 1
MGI|MGI:1933159 - symbol:Rnf114 "ring finger protein 114"... 109 0.00070 1
>MGI|MGI:108064 [details] [associations]
symbol:Siah1a "seven in absentia 1A" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007141
"male meiosis I" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISO;IDA]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=TAS] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=ISO]
[GO:0030877 "beta-catenin destruction complex" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=ISO;IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051402 "neuron apoptotic process" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:108064 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 GO:GO:0030154 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 GO:GO:0051402 GO:GO:0040014
GO:GO:0007283 GO:GO:0009791 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF49599 GO:GO:0007141
Gene3D:3.90.890.10 EMBL:Z19579 EMBL:BC046317 IPI:IPI00117790
PIR:I48763 RefSeq:NP_033198.1 UniGene:Mm.324553 UniGene:Mm.474080
PDB:1K2F PDB:2AN6 PDBsum:1K2F PDBsum:2AN6 ProteinModelPortal:P61092
SMR:P61092 DIP:DIP-29100N IntAct:P61092 STRING:P61092
PhosphoSite:P61092 PRIDE:P61092 Ensembl:ENSMUST00000045296
GeneID:20437 KEGG:mmu:20437 UCSC:uc009mqn.2 CTD:20437
eggNOG:NOG264215 GeneTree:ENSGT00390000005434 HOGENOM:HOG000231487
HOVERGEN:HBG055701 InParanoid:P61092 KO:K04506 OMA:HEETCEF
OrthoDB:EOG4F7NKB ChiTaRS:Siah1a EvolutionaryTrace:P61092
NextBio:298464 Bgee:P61092 CleanEx:MM_SIAH1A Genevestigator:P61092
GermOnline:ENSMUSG00000036840 PANTHER:PTHR10315 Uniprot:P61092
Length = 282
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 210/249 (84%), Positives = 229/249 (91%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
++ DLASLFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLAMEKV
Sbjct: 31 SNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV 90
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A ++ FPC+Y +GC I+L HTEK EHE+ CE RPY CPCPGASCKW G+LD VM HL
Sbjct: 91 ANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 150
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG HFMLVLEKQEK+DGHQ FFAIVQ
Sbjct: 151 QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQ 210
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADN 288
LIG+RKQ+ENF YRLELNGHRRRLTWEATPRSIHEG+A+AIMNSDCLVFDT+IAQLFA+N
Sbjct: 211 LIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAEN 270
Query: 289 GNLGINVTI 297
GNLGINVTI
Sbjct: 271 GNLGINVTI 279
>RGD|620449 [details] [associations]
symbol:Siah1a "seven in absentia 1A" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA;ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO;IPI] [GO:0008270 "zinc
ion binding" evidence=ISO;ISS] [GO:0009791 "post-embryonic
development" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=ISO]
[GO:0030877 "beta-catenin destruction complex" evidence=ISO;ISS]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0040014
"regulation of multicellular organism growth" evidence=ISO]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS;IDA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;ISS] [GO:0051402 "neuron apoptotic process"
evidence=IMP] [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 SMART:SM00184 UniPathway:UPA00143 RGD:620449
Prosite:PS00518 GO:GO:0007275 GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 GO:GO:0030154 GO:GO:0043161 GO:GO:0046872
GO:GO:0008270 GO:GO:0051402 GO:GO:0007283 GO:GO:0007049
GO:GO:0043065 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0005769 GO:GO:0030877 GO:GO:2001244 GO:GO:0042787
SUPFAM:SSF49599 GO:GO:0031648 Gene3D:3.90.890.10 CTD:20437
eggNOG:NOG264215 GeneTree:ENSGT00390000005434 HOGENOM:HOG000231487
HOVERGEN:HBG055701 KO:K04506 OMA:HEETCEF OrthoDB:EOG4F7NKB
PANTHER:PTHR10315 EMBL:AF389476 EMBL:AB067814 IPI:IPI00200708
RefSeq:NP_543181.2 UniGene:Rn.73937 ProteinModelPortal:Q920M9
SMR:Q920M9 IntAct:Q920M9 STRING:Q920M9 PRIDE:Q920M9
Ensembl:ENSRNOT00000020329 GeneID:140941 KEGG:rno:140941
InParanoid:Q920M9 NextBio:620838 ArrayExpress:Q920M9
Genevestigator:Q920M9 GermOnline:ENSRNOG00000015143 Uniprot:Q920M9
Length = 282
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 210/249 (84%), Positives = 229/249 (91%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
++ DLASLFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLAMEKV
Sbjct: 31 SNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV 90
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A ++ FPC+Y +GC I+L HTEK EHE+ CE RPY CPCPGASCKW G+LD VM HL
Sbjct: 91 ANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 150
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG HFMLVLEKQEK+DGHQ FFAIVQ
Sbjct: 151 QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQ 210
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADN 288
LIG+RKQ+ENF YRLELNGHRRRLTWEATPRSIHEG+A+AIMNSDCLVFDT+IAQLFA+N
Sbjct: 211 LIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAEN 270
Query: 289 GNLGINVTI 297
GNLGINVTI
Sbjct: 271 GNLGINVTI 279
>UNIPROTKB|Q920M9 [details] [associations]
symbol:Siah1 "E3 ubiquitin-protein ligase SIAH1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 UniPathway:UPA00143 RGD:620449 Prosite:PS00518
GO:GO:0007275 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
GO:GO:0030154 GO:GO:0043161 GO:GO:0046872 GO:GO:0008270
GO:GO:0051402 GO:GO:0007283 GO:GO:0007049 GO:GO:0043065
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0005769
GO:GO:0030877 GO:GO:2001244 GO:GO:0042787 SUPFAM:SSF49599
GO:GO:0031648 Gene3D:3.90.890.10 CTD:20437 eggNOG:NOG264215
GeneTree:ENSGT00390000005434 HOGENOM:HOG000231487
HOVERGEN:HBG055701 KO:K04506 OMA:HEETCEF OrthoDB:EOG4F7NKB
PANTHER:PTHR10315 EMBL:AF389476 EMBL:AB067814 IPI:IPI00200708
RefSeq:NP_543181.2 UniGene:Rn.73937 ProteinModelPortal:Q920M9
SMR:Q920M9 IntAct:Q920M9 STRING:Q920M9 PRIDE:Q920M9
Ensembl:ENSRNOT00000020329 GeneID:140941 KEGG:rno:140941
InParanoid:Q920M9 NextBio:620838 ArrayExpress:Q920M9
Genevestigator:Q920M9 GermOnline:ENSRNOG00000015143 Uniprot:Q920M9
Length = 282
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 210/249 (84%), Positives = 229/249 (91%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
++ DLASLFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLAMEKV
Sbjct: 31 SNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV 90
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A ++ FPC+Y +GC I+L HTEK EHE+ CE RPY CPCPGASCKW G+LD VM HL
Sbjct: 91 ANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 150
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG HFMLVLEKQEK+DGHQ FFAIVQ
Sbjct: 151 QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQ 210
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADN 288
LIG+RKQ+ENF YRLELNGHRRRLTWEATPRSIHEG+A+AIMNSDCLVFDT+IAQLFA+N
Sbjct: 211 LIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAEN 270
Query: 289 GNLGINVTI 297
GNLGINVTI
Sbjct: 271 GNLGINVTI 279
>UNIPROTKB|F1P2G0 [details] [associations]
symbol:SIAH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030877
"beta-catenin destruction complex" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:2001244 "positive regulation of intrinsic apoptotic signaling
pathway" evidence=IEA] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0043065 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0030877 GO:GO:2001244
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00390000005434
KO:K04506 OMA:HEETCEF PANTHER:PTHR10315 CTD:6477 EMBL:AADN02038562
IPI:IPI00581986 RefSeq:XP_414105.2 UniGene:Gga.2757
ProteinModelPortal:F1P2G0 Ensembl:ENSGALT00000006236 GeneID:374076
KEGG:gga:374076 NextBio:20813597 Uniprot:F1P2G0
Length = 282
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 209/249 (83%), Positives = 229/249 (91%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
++ DLASLFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLAMEKV
Sbjct: 31 SNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV 90
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A ++ FPC+Y +GC I+L HTEK +HE+ CE RPY CPCPGASCKW G+LD VM HL
Sbjct: 91 ANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 150
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG HFMLVLEKQEK+DGHQ FFAIVQ
Sbjct: 151 QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQ 210
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADN 288
LIG+RKQ+ENF YRLELNGHRRRLTWEATPRSIHEG+A+AIMNSDCLVFDT+IAQLFA+N
Sbjct: 211 LIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAEN 270
Query: 289 GNLGINVTI 297
GNLGINVTI
Sbjct: 271 GNLGINVTI 279
>UNIPROTKB|F1N5G3 [details] [associations]
symbol:SIAH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 SMART:SM00184 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0043065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0030877
GO:GO:2001244 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00390000005434 KO:K04506 OMA:HEETCEF
PANTHER:PTHR10315 CTD:6477 EMBL:DAAA02046333 IPI:IPI00904462
RefSeq:NP_001180122.1 UniGene:Bt.37798 Ensembl:ENSBTAT00000053788
GeneID:534655 KEGG:bta:534655 NextBio:20876491 Uniprot:F1N5G3
Length = 313
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 209/249 (83%), Positives = 229/249 (91%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
++ DLASLFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLAMEKV
Sbjct: 62 SNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV 121
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A ++ FPC+Y +GC I+L HTEK +HE+ CE RPY CPCPGASCKW G+LD VM HL
Sbjct: 122 ANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 181
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG HFMLVLEKQEK+DGHQ FFAIVQ
Sbjct: 182 QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQ 241
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADN 288
LIG+RKQ+ENF YRLELNGHRRRLTWEATPRSIHEG+A+AIMNSDCLVFDT+IAQLFA+N
Sbjct: 242 LIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAEN 301
Query: 289 GNLGINVTI 297
GNLGINVTI
Sbjct: 302 GNLGINVTI 310
>UNIPROTKB|F1PEG8 [details] [associations]
symbol:SIAH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00390000005434
OMA:HEETCEF PANTHER:PTHR10315 EMBL:AAEX03001639 EMBL:AAEX03001637
EMBL:AAEX03001638 Ensembl:ENSCAFT00000015934 Uniprot:F1PEG8
Length = 308
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 209/249 (83%), Positives = 229/249 (91%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
++ DLASLFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLAMEKV
Sbjct: 57 SNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV 116
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A ++ FPC+Y +GC I+L HTEK +HE+ CE RPY CPCPGASCKW G+LD VM HL
Sbjct: 117 ANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 176
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG HFMLVLEKQEK+DGHQ FFAIVQ
Sbjct: 177 QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQ 236
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADN 288
LIG+RKQ+ENF YRLELNGHRRRLTWEATPRSIHEG+A+AIMNSDCLVFDT+IAQLFA+N
Sbjct: 237 LIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAEN 296
Query: 289 GNLGINVTI 297
GNLGINVTI
Sbjct: 297 GNLGINVTI 305
>UNIPROTKB|Q8IUQ4 [details] [associations]
symbol:SIAH1 "E3 ubiquitin-protein ligase SIAH1"
species:9606 "Homo sapiens" [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISS;IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISS] [GO:0051402
"neuron apoptotic process" evidence=ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS;IMP] [GO:0030877
"beta-catenin destruction complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0043065
"positive regulation of apoptotic process" evidence=IDA]
[GO:0006508 "proteolysis" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0043161 GO:GO:0046872
GO:GO:0008270 GO:GO:0051402 GO:GO:0007283 GO:GO:0007049
GO:GO:0043065 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0005769 GO:GO:0030877 GO:GO:2001244 GO:GO:0042787
SUPFAM:SSF49599 GO:GO:0031648 PDB:2A25 PDBsum:2A25
Gene3D:3.90.890.10 eggNOG:NOG264215 HOGENOM:HOG000231487
HOVERGEN:HBG055701 KO:K04506 OMA:HEETCEF OrthoDB:EOG4F7NKB
PANTHER:PTHR10315 CTD:6477 EMBL:U63295 EMBL:U76247 EMBL:AJ400626
EMBL:EF026094 EMBL:BX647064 EMBL:BC035562 EMBL:BC042550
EMBL:BC044920 IPI:IPI00328242 IPI:IPI00396517 IPI:IPI00872574
RefSeq:NP_001006611.1 RefSeq:NP_003022.3 UniGene:Hs.706828
ProteinModelPortal:Q8IUQ4 SMR:Q8IUQ4 IntAct:Q8IUQ4 MINT:MINT-156060
STRING:Q8IUQ4 PhosphoSite:Q8IUQ4 DMDM:46577493 PRIDE:Q8IUQ4
DNASU:6477 Ensembl:ENST00000356721 Ensembl:ENST00000380006
Ensembl:ENST00000394725 Ensembl:ENST00000568007 GeneID:6477
KEGG:hsa:6477 UCSC:uc002efn.1 UCSC:uc002efo.1 GeneCards:GC16M048443
HGNC:HGNC:10857 HPA:CAB018724 MIM:602212 neXtProt:NX_Q8IUQ4
PharmGKB:PA35759 EvolutionaryTrace:Q8IUQ4 GenomeRNAi:6477
NextBio:25161 Bgee:Q8IUQ4 CleanEx:HS_SIAH1 Genevestigator:Q8IUQ4
GermOnline:ENSG00000196470 Uniprot:Q8IUQ4
Length = 282
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 209/249 (83%), Positives = 229/249 (91%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
++ DLASLFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLAMEKV
Sbjct: 31 SNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV 90
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A ++ FPC+Y +GC I+L HTEK +HE+ CE RPY CPCPGASCKW G+LD VM HL
Sbjct: 91 ANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 150
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG HFMLVLEKQEK+DGHQ FFAIVQ
Sbjct: 151 QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQ 210
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADN 288
LIG+RKQ+ENF YRLELNGHRRRLTWEATPRSIHEG+A+AIMNSDCLVFDT+IAQLFA+N
Sbjct: 211 LIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAEN 270
Query: 289 GNLGINVTI 297
GNLGINVTI
Sbjct: 271 GNLGINVTI 279
>ZFIN|ZDB-GENE-010319-31 [details] [associations]
symbol:siah1 "seven in absentia homolog 1
(Drosophila)" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0051402 "neuron apoptotic process"
evidence=ISS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-010319-31 GO:GO:0007275 GO:GO:0005829 GO:GO:0005634
GO:GO:0043161 GO:GO:0046872 GO:GO:0008270 GO:GO:0051402
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0042787
SUPFAM:SSF49599 Gene3D:3.90.890.10 eggNOG:NOG264215
GeneTree:ENSGT00390000005434 HOVERGEN:HBG055701 KO:K04506
OMA:HEETCEF OrthoDB:EOG4F7NKB PANTHER:PTHR10315 EMBL:BC045870
IPI:IPI00511165 RefSeq:NP_955815.1 UniGene:Dr.5064
ProteinModelPortal:Q7ZVG6 SMR:Q7ZVG6 STRING:Q7ZVG6
Ensembl:ENSDART00000043843 GeneID:80955 KEGG:dre:80955 CTD:6477
InParanoid:Q7ZVG6 NextBio:20934140 ArrayExpress:Q7ZVG6 Bgee:Q7ZVG6
Uniprot:Q7ZVG6
Length = 282
Score = 1170 (416.9 bits), Expect = 7.7e-119, P = 7.7e-119
Identities = 208/249 (83%), Positives = 230/249 (92%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
+++DLASLFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLAMEKV
Sbjct: 31 SNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV 90
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A ++ FPC+Y +GC ++L HT+K EHE+ CE RPY CPCPGASCKW G+LD VM HL
Sbjct: 91 ANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLLH 150
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG HFMLVLEKQEK+DGHQ FFAIVQ
Sbjct: 151 QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQ 210
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADN 288
LIG+RKQ+ENF YRLELNGHRRRLTWEATPRSIHEG+A+AIMNSDCLVFDT+IAQLFA+N
Sbjct: 211 LIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAEN 270
Query: 289 GNLGINVTI 297
GNLGINVTI
Sbjct: 271 GNLGINVTI 279
>MGI|MGI:108063 [details] [associations]
symbol:Siah1b "seven in absentia 1B" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=TAS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:108063
Prosite:PS00518 GO:GO:0007275 GO:GO:0005829 GO:GO:0005634
GO:GO:0043161 GO:GO:0046872 GO:GO:0008270 GO:GO:0051402
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0042787
SUPFAM:SSF49599 Gene3D:3.90.890.10 eggNOG:NOG264215
HOGENOM:HOG000231487 HOVERGEN:HBG055701 KO:K04506 OrthoDB:EOG4F7NKB
PANTHER:PTHR10315 EMBL:Z19580 EMBL:BC052887 IPI:IPI00117792
PIR:I48764 RefSeq:NP_033199.1 UniGene:Mm.37215 UniGene:Mm.379013
ProteinModelPortal:Q06985 SMR:Q06985 IntAct:Q06985 STRING:Q06985
PRIDE:Q06985 GeneID:20438 KEGG:mmu:20438 CTD:20438
InParanoid:Q06985 NextBio:298468 CleanEx:MM_SIAH1B
Genevestigator:Q06985 GermOnline:ENSMUSG00000040749 Uniprot:Q06985
Length = 282
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 208/249 (83%), Positives = 229/249 (91%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
++ DLASLFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLA+EKV
Sbjct: 31 SNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAVEKV 90
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A ++ FPC+Y +GC I+L HT+K EHE+ CE RPY CPCPGASCKW G+LD VM HL
Sbjct: 91 ANSVLFPCKYSASGCEITLPHTKKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 150
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG HFMLVLEKQEK+DGHQ FFAIVQ
Sbjct: 151 QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQ 210
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADN 288
LIG+RKQ+ENF YRLELNGHRRRLTWEATPRSIHEG+A+AIMNSDCLVFDT+IAQLFA+N
Sbjct: 211 LIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAEN 270
Query: 289 GNLGINVTI 297
GNLGINVTI
Sbjct: 271 GNLGINVTI 279
>FB|FBgn0003410 [details] [associations]
symbol:sina "seven in absentia" species:7227 "Drosophila
melanogaster" [GO:0045676 "regulation of R7 cell differentiation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=NAS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;NAS] [GO:0007465 "R7 cell fate commitment"
evidence=TAS] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IDA] [GO:0006508 "proteolysis"
evidence=TAS] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0010498
"proteasomal protein catabolic process" evidence=IDA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
EMBL:AE014296 GO:GO:0046872 GO:GO:0016874 GO:GO:0007601
GO:GO:0008270 GO:GO:0007465 GO:GO:0050896 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0010498
GO:GO:0000151 SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0045676
eggNOG:NOG264215 GeneTree:ENSGT00390000005434 KO:K04506
PANTHER:PTHR10315 OMA:EACEFRP OrthoDB:EOG498SGN EMBL:M38384
EMBL:AY060358 PIR:A36195 RefSeq:NP_476725.1 RefSeq:NP_730206.1
UniGene:Dm.7276 ProteinModelPortal:P21461 SMR:P21461 DIP:DIP-17392N
IntAct:P21461 MINT:MINT-286541 STRING:P21461 PaxDb:P21461
EnsemblMetazoa:FBtr0075332 EnsemblMetazoa:FBtr0075333 GeneID:39884
KEGG:dme:Dmel_CG9949 CTD:39884 FlyBase:FBgn0003410
InParanoid:P21461 PhylomeDB:P21461 GenomeRNAi:39884 NextBio:815887
Bgee:P21461 GermOnline:CG9949 Uniprot:P21461
Length = 314
Score = 1161 (413.8 bits), Expect = 6.9e-118, P = 6.9e-118
Identities = 216/292 (73%), Positives = 234/292 (80%)
Query: 9 GVDSNPNHTVGIVGSKKHGPGNGLXXXXXXXXXXXXXXAGTSTDLASLFECPVCFDYVLP 68
GV +N + + G + N AG S DL SLFECPVCFDYVLP
Sbjct: 23 GVATNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLP 82
Query: 69 PIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLL 128
PI+QC SGHLVC +CR KL+CCPTCRGPL NIRNLAMEKVA + FPC++ GC SL+
Sbjct: 83 PILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAMEKVASNVKFPCKHSGYGCTASLV 142
Query: 129 HTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDI 188
+TEK EHE+TCE RPYLCPCPGASCKW G LD VM HL SHKSITTLQGEDIVFLATDI
Sbjct: 143 YTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQGEDIVFLATDI 202
Query: 189 NLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGH 248
NLPGAVDWVMMQSCFGHHFMLVLEKQEK+DGHQ FFAIVQLIGSRK++ENF YRLELNG+
Sbjct: 203 NLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENFVYRLELNGN 262
Query: 249 RRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTIGTV 300
RRRLTWEA PRSIHEGVASAI NSDCLVFDT+IAQLFADNGNLGINVTI V
Sbjct: 263 RRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFADNGNLGINVTISLV 314
>UNIPROTKB|P61093 [details] [associations]
symbol:sina "E3 ubiquitin-protein ligase sina" species:7220
"Drosophila erecta" [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0007423 "sensory organ development" evidence=ISS] [GO:0016874
"ligase activity" evidence=ISS] [GO:0045676 "regulation of R7 cell
differentiation" evidence=ISS] InterPro:IPR001841
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0007423 GO:GO:0046872
GO:GO:0016874 GO:GO:0007601 GO:GO:0008270 GO:GO:0050896
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 EMBL:AY190936 EMBL:CH954178 Gene3D:3.90.890.10
GO:GO:0045676 KO:K04506 PANTHER:PTHR10315 RefSeq:XP_001973003.1
ProteinModelPortal:P61093 SMR:P61093 EnsemblMetazoa:FBtr0133638
GeneID:6544148 KEGG:der:Dere_GG13584 FlyBase:FBgn0064599
OrthoDB:EOG498SGN Uniprot:P61093
Length = 314
Score = 1161 (413.8 bits), Expect = 6.9e-118, P = 6.9e-118
Identities = 216/292 (73%), Positives = 234/292 (80%)
Query: 9 GVDSNPNHTVGIVGSKKHGPGNGLXXXXXXXXXXXXXXAGTSTDLASLFECPVCFDYVLP 68
GV +N + + G + N AG S DL SLFECPVCFDYVLP
Sbjct: 23 GVATNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLP 82
Query: 69 PIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLL 128
PI+QC SGHLVC +CR KL+CCPTCRGPL NIRNLAMEKVA + FPC++ GC SL+
Sbjct: 83 PILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAMEKVASNVKFPCKHSGYGCTASLV 142
Query: 129 HTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDI 188
+TEK EHE+TCE RPYLCPCPGASCKW G LD VM HL SHKSITTLQGEDIVFLATDI
Sbjct: 143 YTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQGEDIVFLATDI 202
Query: 189 NLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGH 248
NLPGAVDWVMMQSCFGHHFMLVLEKQEK+DGHQ FFAIVQLIGSRK++ENF YRLELNG+
Sbjct: 203 NLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENFVYRLELNGN 262
Query: 249 RRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTIGTV 300
RRRLTWEA PRSIHEGVASAI NSDCLVFDT+IAQLFADNGNLGINVTI V
Sbjct: 263 RRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFADNGNLGINVTISLV 314
>UNIPROTKB|Q8I147 [details] [associations]
symbol:sina "E3 ubiquitin-protein ligase sina" species:7260
"Drosophila willistoni" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0007423 "sensory organ development" evidence=ISS]
[GO:0016874 "ligase activity" evidence=ISS] [GO:0045676 "regulation
of R7 cell differentiation" evidence=ISS] InterPro:IPR001841
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0007423 GO:GO:0046872
GO:GO:0016874 GO:GO:0007601 GO:GO:0008270 InterPro:IPR006311
GO:GO:0050896 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 SUPFAM:SSF49599 EMBL:AY190961 Gene3D:3.90.890.10
EMBL:CH963876 GO:GO:0045676 eggNOG:NOG264215 KO:K04506 OMA:HEETCEF
PANTHER:PTHR10315 OrthoDB:EOG498SGN RefSeq:XP_002065934.1
ProteinModelPortal:Q8I147 SMR:Q8I147 STRING:Q8I147
EnsemblMetazoa:FBtr0251523 GeneID:6642991 KEGG:dwi:Dwil_GK20872
FlyBase:FBgn0064264 InParanoid:Q8I147 Uniprot:Q8I147
Length = 331
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 211/254 (83%), Positives = 225/254 (88%)
Query: 47 AGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAME 106
AG S DL SLFECPVCFDYVLPPI+QC SGHLVC +CR KL+CCPTCRGPL NIRNLAME
Sbjct: 78 AGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAME 137
Query: 107 KVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHL 166
KVA + FPC++ GC SL++TEK EHE+TCE RPYLCPCPGASCKW G LD VM HL
Sbjct: 138 KVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHL 197
Query: 167 NQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAI 226
SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK+DGHQ FFAI
Sbjct: 198 MMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAI 257
Query: 227 VQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA 286
VQLIGSRK++ENF YRLELNG+RRRLTWEA PRSIHEGVASAI NSDCLVFDT+IAQLFA
Sbjct: 258 VQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFA 317
Query: 287 DNGNLGINVTIGTV 300
DNGNLGINVTI V
Sbjct: 318 DNGNLGINVTISLV 331
>UNIPROTKB|P29304 [details] [associations]
symbol:sina "E3 ubiquitin-protein ligase sina" species:7244
"Drosophila virilis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0007423 "sensory organ development" evidence=ISS]
[GO:0016874 "ligase activity" evidence=ISS] [GO:0045676 "regulation
of R7 cell differentiation" evidence=ISS] InterPro:IPR001841
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0007423 GO:GO:0046872
GO:GO:0016874 GO:GO:0007601 GO:GO:0008270 GO:GO:0050896
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0045676 eggNOG:NOG264215
PANTHER:PTHR10315 OrthoDB:EOG498SGN EMBL:M77282 PIR:A41544
ProteinModelPortal:P29304 SMR:P29304 STRING:P29304
FlyBase:FBgn0013142 InParanoid:P29304 Uniprot:P29304
Length = 314
Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
Identities = 210/254 (82%), Positives = 225/254 (88%)
Query: 47 AGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAME 106
AG S DL SLFECPVCFDYVLPPI+QC SGHLVC +CR KL+CCPTCRGPL NIRNLAME
Sbjct: 61 AGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAME 120
Query: 107 KVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHL 166
+VA + FPC++ GC SL++TEK EHE+TCE RPYLCPCPGASCKW G LD VM HL
Sbjct: 121 EVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHL 180
Query: 167 NQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAI 226
SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK+DGHQ FFAI
Sbjct: 181 MMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAI 240
Query: 227 VQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA 286
VQLIGSRK++ENF YRLELNG+RRRLTWEA PRSIHEGVASAI NSDCLVFDT+IAQLFA
Sbjct: 241 VQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFA 300
Query: 287 DNGNLGINVTIGTV 300
DNGNLGINVTI V
Sbjct: 301 DNGNLGINVTISLV 314
>ZFIN|ZDB-GENE-030922-1 [details] [associations]
symbol:siah2l "seven in absentia homolog 2
(Drosophila)-like" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=NAS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030922-1 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0007093 SUPFAM:SSF49599 Gene3D:3.90.890.10
eggNOG:NOG264215 HOGENOM:HOG000231487 HOVERGEN:HBG055701
PANTHER:PTHR10315 EMBL:AF411696 EMBL:BC054674 IPI:IPI00488119
IPI:IPI00513263 RefSeq:NP_956721.1 UniGene:Dr.67167
ProteinModelPortal:Q7SYL3 SMR:Q7SYL3 STRING:Q7SYL3 GeneID:378728
KEGG:dre:378728 CTD:378728 InParanoid:Q7SYL3 KO:K08742
NextBio:20813799 ArrayExpress:Q7SYL3 Bgee:Q7SYL3 Uniprot:Q7SYL3
Length = 331
Score = 1129 (402.5 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
Identities = 203/251 (80%), Positives = 226/251 (90%)
Query: 48 GTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAME 106
G S +L +LFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRGPL +IRNLAME
Sbjct: 78 GQSPELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIRNLAME 137
Query: 107 KVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHL 166
KVA T+ FPC+Y GC +SL H+EKPEHE+ CE RPY CPCPGASCKW G+L++VM HL
Sbjct: 138 KVASTLPFPCKYSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEEVMPHL 197
Query: 167 NQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAI 226
+HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAI
Sbjct: 198 MHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAI 257
Query: 227 VQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA 286
V LIG+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GVA+AIMNSDCLVFDT+IA LFA
Sbjct: 258 VLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHLFA 317
Query: 287 DNGNLGINVTI 297
DNGNLGINVTI
Sbjct: 318 DNGNLGINVTI 328
Score = 38 (18.4 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
Identities = 8/38 (21%), Positives = 10/38 (26%)
Query: 19 GIVGSKKHGPGNGLXXXXXXXXXXXXXXAGTSTDLASL 56
G G KHG G A + A +
Sbjct: 17 GKAGGSKHGGSGGTTASAAAAAAAAAAAAAAAAAAAGV 54
>UNIPROTKB|O43255 [details] [associations]
symbol:SIAH2 "E3 ubiquitin-protein ligase SIAH2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0031396 "regulation of protein
ubiquitination" evidence=IEA] [GO:0031624 "ubiquitin conjugating
enzyme binding" evidence=IEA] [GO:0043005 "neuron projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:2001237 "negative
regulation of extrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0043066 "negative regulation
of apoptotic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003714 "transcription corepressor activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0007264
"small GTPase mediated signal transduction" evidence=TAS]
[GO:0044257 "cellular protein catabolic process" evidence=IGI]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0007411 "axon guidance"
evidence=TAS] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111045 GO:GO:0003714 GO:GO:0007411
GO:GO:0043066 GO:GO:0043154 GO:GO:0007264 GO:GO:0046872
GO:GO:0008270 GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0090090 GO:GO:0004842 SUPFAM:SSF49599
GO:GO:2001237 Gene3D:3.90.890.10 eggNOG:NOG264215
HOGENOM:HOG000231487 HOVERGEN:HBG055701 OrthoDB:EOG4F7NKB
PANTHER:PTHR10315 KO:K08742 EMBL:U76248 EMBL:Y15268 EMBL:BC013082
IPI:IPI00305283 RefSeq:NP_005058.3 UniGene:Hs.477959
UniGene:Hs.692394 ProteinModelPortal:O43255 SMR:O43255
IntAct:O43255 MINT:MINT-200601 STRING:O43255 PhosphoSite:O43255
PRIDE:O43255 Ensembl:ENST00000312960 GeneID:6478 KEGG:hsa:6478
UCSC:uc003eyi.3 CTD:6478 GeneCards:GC03M150458 H-InvDB:HIX0163461
HGNC:HGNC:10858 MIM:602213 neXtProt:NX_O43255 PharmGKB:PA35760
InParanoid:O43255 OMA:METDSME ChiTaRS:SIAH2 GenomeRNAi:6478
NextBio:25167 ArrayExpress:O43255 Bgee:O43255 CleanEx:HS_SIAH2
Genevestigator:O43255 GermOnline:ENSG00000181788 Uniprot:O43255
Length = 324
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 202/249 (81%), Positives = 223/249 (89%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRG L +IRNLAMEKVA
Sbjct: 73 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVAS 132
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+HL +H
Sbjct: 133 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAH 192
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 193 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 252
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GVA+AIMNSDCLVFDT IA LFADNGN
Sbjct: 253 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIAHLFADNGN 312
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 313 LGINVTIST 321
>MGI|MGI:108062 [details] [associations]
symbol:Siah2 "seven in absentia 2" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=TAS]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031396 "regulation
of protein ubiquitination" evidence=ISO] [GO:0031624 "ubiquitin
conjugating enzyme binding" evidence=ISO] [GO:0043005 "neuron
projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0044257 "cellular protein catabolic process"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=ISO] [GO:2001237 "negative regulation
of extrinsic apoptotic signaling pathway" evidence=ISO]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:108062 Prosite:PS00518 GO:GO:0007275
GO:GO:0005829 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0046872 GO:GO:0008270 GO:GO:0007049 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0090090 GO:GO:0004842
SUPFAM:SSF49599 GO:GO:2001237 Gene3D:3.90.890.10 eggNOG:NOG264215
HOGENOM:HOG000231487 HOVERGEN:HBG055701 OrthoDB:EOG4F7NKB
PANTHER:PTHR10315 KO:K08742 CTD:6478 EMBL:Z19581 EMBL:BC058400
IPI:IPI00117795 PIR:I48765 RefSeq:NP_033200.2 UniGene:Mm.2847
ProteinModelPortal:Q06986 SMR:Q06986 IntAct:Q06986 STRING:Q06986
PhosphoSite:Q06986 PRIDE:Q06986 Ensembl:ENSMUST00000070368
GeneID:20439 KEGG:mmu:20439 OMA:TISTCCQ NextBio:298472 Bgee:Q06986
CleanEx:MM_SIAH2 Genevestigator:Q06986
GermOnline:ENSMUSG00000036432 Uniprot:Q06986
Length = 325
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 202/249 (81%), Positives = 223/249 (89%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRG L +IRNLAMEKVA
Sbjct: 74 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVAS 133
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+HL +H
Sbjct: 134 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAH 193
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 194 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 253
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GVA+AIMNSDCLVFDT IA LFADNGN
Sbjct: 254 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIAHLFADNGN 313
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 314 LGINVTIST 322
>RGD|620778 [details] [associations]
symbol:Siah2 "siah E3 ubiquitin protein ligase 2" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031396 "regulation of protein
ubiquitination" evidence=IDA] [GO:0031624 "ubiquitin conjugating
enzyme binding" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0044257 "cellular protein catabolic process"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:2001237 "negative
regulation of extrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 UniPathway:UPA00143 RGD:620778 Prosite:PS00518
GO:GO:0007275 GO:GO:0005829 GO:GO:0005634 GO:GO:0006915
GO:GO:0046872 GO:GO:0043025 GO:GO:0008270 GO:GO:0043005
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0005769 GO:GO:0031396 SUPFAM:SSF49599
Gene3D:3.90.890.10 GO:GO:0031624 eggNOG:NOG264215
GeneTree:ENSGT00390000005434 HOGENOM:HOG000231487
HOVERGEN:HBG055701 PANTHER:PTHR10315 KO:K08742 CTD:6478
EMBL:AB067815 EMBL:AF389477 IPI:IPI00200707 RefSeq:NP_604452.1
UniGene:Rn.29192 ProteinModelPortal:Q8R4T2 SMR:Q8R4T2 STRING:Q8R4T2
Ensembl:ENSRNOT00000018488 GeneID:140593 KEGG:rno:140593
UCSC:RGD:620778 NextBio:620566 ArrayExpress:Q8R4T2
Genevestigator:Q8R4T2 GermOnline:ENSRNOG00000013703 Uniprot:Q8R4T2
Length = 325
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 202/249 (81%), Positives = 223/249 (89%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRG L +IRNLAMEKVA
Sbjct: 74 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVAS 133
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+HL +H
Sbjct: 134 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAH 193
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 194 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 253
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GVA+AIMNSDCLVFDT IA LFADNGN
Sbjct: 254 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIAHLFADNGN 313
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 314 LGINVTIST 322
>UNIPROTKB|Q8R4T2 [details] [associations]
symbol:Siah2 "E3 ubiquitin-protein ligase SIAH2"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 UniPathway:UPA00143 RGD:620778 Prosite:PS00518
GO:GO:0007275 GO:GO:0005829 GO:GO:0005634 GO:GO:0006915
GO:GO:0046872 GO:GO:0043025 GO:GO:0008270 GO:GO:0043005
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0005769 GO:GO:0031396 SUPFAM:SSF49599
Gene3D:3.90.890.10 GO:GO:0031624 eggNOG:NOG264215
GeneTree:ENSGT00390000005434 HOGENOM:HOG000231487
HOVERGEN:HBG055701 PANTHER:PTHR10315 KO:K08742 CTD:6478
EMBL:AB067815 EMBL:AF389477 IPI:IPI00200707 RefSeq:NP_604452.1
UniGene:Rn.29192 ProteinModelPortal:Q8R4T2 SMR:Q8R4T2 STRING:Q8R4T2
Ensembl:ENSRNOT00000018488 GeneID:140593 KEGG:rno:140593
UCSC:RGD:620778 NextBio:620566 ArrayExpress:Q8R4T2
Genevestigator:Q8R4T2 GermOnline:ENSRNOG00000013703 Uniprot:Q8R4T2
Length = 325
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 202/249 (81%), Positives = 223/249 (89%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRG L +IRNLAMEKVA
Sbjct: 74 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVAS 133
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+HL +H
Sbjct: 134 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAH 193
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 194 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 253
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GVA+AIMNSDCLVFDT IA LFADNGN
Sbjct: 254 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIAHLFADNGN 313
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 314 LGINVTIST 322
>UNIPROTKB|F1MBM6 [details] [associations]
symbol:SIAH2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001237 "negative regulation of extrinsic apoptotic
signaling pathway" evidence=IEA] [GO:0090090 "negative regulation
of canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
GO:GO:0007275 GO:GO:0005829 GO:GO:0005634 GO:GO:0043066
GO:GO:0043154 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0090090 GO:GO:0004842
SUPFAM:SSF49599 GO:GO:2001237 Gene3D:3.90.890.10
GeneTree:ENSGT00390000005434 PANTHER:PTHR10315 KO:K08742 CTD:6478
OMA:METDSME EMBL:DAAA02002676 IPI:IPI00837974 RefSeq:NP_001193983.1
UniGene:Bt.17299 Ensembl:ENSBTAT00000044404 GeneID:785659
KEGG:bta:785659 NextBio:20927421 Uniprot:F1MBM6
Length = 332
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 201/249 (80%), Positives = 223/249 (89%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRG L +IRNLAMEKVA
Sbjct: 81 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVAS 140
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+HL +H
Sbjct: 141 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAH 200
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 201 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 260
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GV++AIMNSDCLVFDT IA LFADNGN
Sbjct: 261 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVSAAIMNSDCLVFDTAIAHLFADNGN 320
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 321 LGINVTIST 329
>UNIPROTKB|F1P937 [details] [associations]
symbol:FAM194A "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00530000064027
PANTHER:PTHR10315 OMA:METDSME EMBL:AAEX03013680 EMBL:AAEX03013681
Ensembl:ENSCAFT00000013403 Uniprot:F1P937
Length = 319
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 201/249 (80%), Positives = 223/249 (89%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRG L +IRNLAMEKVA
Sbjct: 68 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVAS 127
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+HL +H
Sbjct: 128 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAH 187
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 188 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 247
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GVA+AI+NSDCLVFDT IA LFADNGN
Sbjct: 248 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAILNSDCLVFDTAIAHLFADNGN 307
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 308 LGINVTIST 316
>UNIPROTKB|I3L8K6 [details] [associations]
symbol:SIAH2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001237 "negative regulation of extrinsic apoptotic
signaling pathway" evidence=IEA] [GO:0090090 "negative regulation
of canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
GO:GO:0007275 GO:GO:0005829 GO:GO:0005634 GO:GO:0043066
GO:GO:0043154 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0090090 GO:GO:0004842
SUPFAM:SSF49599 GO:GO:2001237 Gene3D:3.90.890.10
GeneTree:ENSGT00390000005434 PANTHER:PTHR10315 KO:K08742 CTD:6478
OMA:METDSME EMBL:FP340172 RefSeq:XP_003358659.1
Ensembl:ENSSSCT00000027338 GeneID:100622531 KEGG:ssc:100622531
Uniprot:I3L8K6
Length = 324
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 201/249 (80%), Positives = 223/249 (89%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC+ CR KLSCCPTCRG L +IRNLAMEKVA
Sbjct: 73 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVAS 132
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+HL +H
Sbjct: 133 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAH 192
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 193 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 252
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GV++AIMNSDCLVFDT IA LFADNGN
Sbjct: 253 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVSAAIMNSDCLVFDTAIAHLFADNGN 312
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 313 LGINVTIST 321
>UNIPROTKB|E1C3Q9 [details] [associations]
symbol:SIAH2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:2001237 "negative
regulation of extrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
GO:GO:0007275 GO:GO:0005829 GO:GO:0005634 GO:GO:0043066
GO:GO:0043154 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0090090 GO:GO:0004842
SUPFAM:SSF49599 GO:GO:2001237 Gene3D:3.90.890.10
GeneTree:ENSGT00390000005434 PANTHER:PTHR10315 KO:K08742 CTD:6478
OMA:METDSME EMBL:AADN02021127 IPI:IPI00680945 RefSeq:XP_426719.2
Ensembl:ENSGALT00000016930 GeneID:429164 KEGG:gga:429164
NextBio:20829977 Uniprot:E1C3Q9
Length = 319
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 198/249 (79%), Positives = 220/249 (88%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAG 110
+L SLFECPVCFDYVLPPI+QCQ+GHLVC CR KLS CPTCRG L +IRNLAMEKVA
Sbjct: 68 ELTSLFECPVCFDYVLPPILQCQAGHLVCKQCRQKLSLCPTCRGSLTPSIRNLAMEKVAS 127
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
+ FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGA+CKW G+L+ VM+HL +H
Sbjct: 128 AVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGATCKWQGSLEAVMSHLMHAH 187
Query: 171 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK++GHQ FFAIV LI
Sbjct: 188 KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLI 247
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGN 290
G+RKQ+ENF YRLELNG+RRRLTWEATPRSIH+GV +AI+NSDCLVFDT IA LFADNGN
Sbjct: 248 GTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVNAAIVNSDCLVFDTAIAHLFADNGN 307
Query: 291 LGINVTIGT 299
LGINVTI T
Sbjct: 308 LGINVTIST 316
>UNIPROTKB|F1N0S2 [details] [associations]
symbol:Bt.105896 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS51081
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00390000005434
PANTHER:PTHR10315 EMBL:DAAA02013335 IPI:IPI01002190
Ensembl:ENSBTAT00000000291 OMA:THEGIAT Uniprot:F1N0S2
Length = 276
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 187/248 (75%), Positives = 214/248 (86%)
Query: 50 STDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKVA 109
+++ ASLF+CP+CFDYVLPPI+QC SGHLV SNCRPK+S CPTCR PL +IRNLAMEKVA
Sbjct: 26 NSEWASLFQCPICFDYVLPPILQCHSGHLVWSNCRPKISRCPTCRDPLRSIRNLAMEKVA 85
Query: 110 GTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQS 169
++ FPC+Y +GC I+L HTEK +HE+ CE RPY CPCPGASCKW G+ D V+ HL
Sbjct: 86 DSVLFPCKYASSGCEITLTHTEKADHEEFCEFRPYSCPCPGASCKWQGSRDAVIPHLMHQ 145
Query: 170 HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQL 229
H+SITTLQGEDIVFLAT INLPGAVDWVMMQSCFG HF+LVLEKQEK+ GH FFAIVQL
Sbjct: 146 HESITTLQGEDIVFLATGINLPGAVDWVMMQSCFGFHFILVLEKQEKYVGHHQFFAIVQL 205
Query: 230 IGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNG 289
IG+RKQ+E+F YRLELNG RRRLTWEATPRS HEG+A+AI NSDCLVFDT +AQ FA+NG
Sbjct: 206 IGTRKQAEDFAYRLELNGPRRRLTWEATPRSTHEGIATAITNSDCLVFDTRVAQFFAENG 265
Query: 290 NLGINVTI 297
NLGINVTI
Sbjct: 266 NLGINVTI 273
>WB|WBGene00021369 [details] [associations]
symbol:siah-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00390000005434 KO:K04506 PANTHER:PTHR10315
EMBL:U89792 EMBL:FO081773 PIR:T37470 RefSeq:NP_500409.1
ProteinModelPortal:Q965X6 SMR:Q965X6 DIP:DIP-27249N IntAct:Q965X6
MINT:MINT-1066674 EnsemblMetazoa:Y37E11AR.2 GeneID:177138
KEGG:cel:CELE_Y37E11AR.2 CTD:177138 WormBase:Y37E11AR.2
InParanoid:Q965X6 OMA:VAPHIPI NextBio:895510 Uniprot:Q965X6
Length = 419
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 174/255 (68%), Positives = 209/255 (81%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
+S ++ S+FECPVC +Y+LPP +QC SGHLVCSNCRPKL CCPTCRGP ++RNL +EK+
Sbjct: 146 SSAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKI 205
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A T+ FPC++ +GC ++ H +K EHE+ CE RPY CPCPGASCKW G L VM HL +
Sbjct: 206 ANTVRFPCKFSTSGCPLNFHHADKTEHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLKK 265
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQH---FFA 225
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCF ++FMLVLEKQEK+D Q F+A
Sbjct: 266 IHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFDYNFMLVLEKQEKYDPAQPTQMFYA 325
Query: 226 IVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLF 285
+VQLIGS+K+++NF YRLEL+ RRR++WEATPRSIHEGV AI SDCL FD+N AQLF
Sbjct: 326 VVQLIGSKKEADNFVYRLELSASRRRMSWEATPRSIHEGVVVAIQQSDCLAFDSNAAQLF 385
Query: 286 ADNGNLGINVTIGTV 300
A+NGNLGINVTI +
Sbjct: 386 AENGNLGINVTISRI 400
>UNIPROTKB|Q965X6 [details] [associations]
symbol:siah-1 "E3 ubiquitin-protein ligase siah-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00390000005434 KO:K04506
PANTHER:PTHR10315 EMBL:U89792 EMBL:FO081773 PIR:T37470
RefSeq:NP_500409.1 ProteinModelPortal:Q965X6 SMR:Q965X6
DIP:DIP-27249N IntAct:Q965X6 MINT:MINT-1066674
EnsemblMetazoa:Y37E11AR.2 GeneID:177138 KEGG:cel:CELE_Y37E11AR.2
CTD:177138 WormBase:Y37E11AR.2 InParanoid:Q965X6 OMA:VAPHIPI
NextBio:895510 Uniprot:Q965X6
Length = 419
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 174/255 (68%), Positives = 209/255 (81%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
+S ++ S+FECPVC +Y+LPP +QC SGHLVCSNCRPKL CCPTCRGP ++RNL +EK+
Sbjct: 146 SSAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKI 205
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A T+ FPC++ +GC ++ H +K EHE+ CE RPY CPCPGASCKW G L VM HL +
Sbjct: 206 ANTVRFPCKFSTSGCPLNFHHADKTEHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLKK 265
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQH---FFA 225
HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCF ++FMLVLEKQEK+D Q F+A
Sbjct: 266 IHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFDYNFMLVLEKQEKYDPAQPTQMFYA 325
Query: 226 IVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLF 285
+VQLIGS+K+++NF YRLEL+ RRR++WEATPRSIHEGV AI SDCL FD+N AQLF
Sbjct: 326 VVQLIGSKKEADNFVYRLELSASRRRMSWEATPRSIHEGVVVAIQQSDCLAFDSNAAQLF 385
Query: 286 ADNGNLGINVTIGTV 300
A+NGNLGINVTI +
Sbjct: 386 AENGNLGINVTISRI 400
>UNIPROTKB|G3X7V0 [details] [associations]
symbol:G3X7V0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 SMART:SM00184 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00390000005434 PANTHER:PTHR10315 EMBL:DAAA02070383
Ensembl:ENSBTAT00000009741 Uniprot:G3X7V0
Length = 281
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 166/250 (66%), Positives = 207/250 (82%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
++ +LASLFECPVCFDYVLPPIIQCQSGHLVC +CRPKL+ CPTCRGPL +IRNLAMEK+
Sbjct: 29 SNNELASLFECPVCFDYVLPPIIQCQSGHLVCGSCRPKLTSCPTCRGPLTSIRNLAMEKL 88
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQ 168
A ++ FPC+Y +GC +++ TEK +HE+ CE RP CPCPG SC W G++D V+ HL Q
Sbjct: 89 ANSVLFPCKYASSGCEVTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQ 148
Query: 169 SH-KSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIV 227
+ +SI TLQGE +VFLA +INL GA+DWVM+QSCFG +F+L+LEK E +DGHQ FFA+V
Sbjct: 149 HYNESIITLQGEVVVFLAVNINLAGALDWVMIQSCFGFNFILILEKLESYDGHQKFFAVV 208
Query: 228 QLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFAD 287
QLIG+R+Q+E FTYRLELNG+RRRL WEATP SI EG+A+A M SDCLV D +A+ FA+
Sbjct: 209 QLIGTREQAEQFTYRLELNGNRRRLIWEATPLSIREGIATAFMTSDCLVLDPGVAERFAE 268
Query: 288 NGNLGINVTI 297
+GNL I+VTI
Sbjct: 269 DGNLSIDVTI 278
>UNIPROTKB|F1NFK4 [details] [associations]
symbol:SIAH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030877
"beta-catenin destruction complex" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:2001244 "positive regulation of intrinsic apoptotic signaling
pathway" evidence=IEA] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0043065 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0030877 GO:GO:2001244
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00390000005434
PANTHER:PTHR10315 EMBL:AADN02038562 IPI:IPI00822874
Ensembl:ENSGALT00000039607 Uniprot:F1NFK4
Length = 192
Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
Identities = 159/192 (82%), Positives = 173/192 (90%)
Query: 56 LFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFP 115
LFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLAMEKVA ++ FP
Sbjct: 1 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFP 60
Query: 116 CRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITT 175
C+Y +GC I+L HTEK +HE+ CE RPY CPCPGASCKW G+LD VM HL HKSITT
Sbjct: 61 CKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITT 120
Query: 176 LQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQ 235
LQGEDIVFLATDINLPGAVDWVMMQSCFG HFMLVLEKQEK+DGHQ FFAIVQLIG+RKQ
Sbjct: 121 LQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQ 180
Query: 236 SENFTYRLELNG 247
+ENF YRLELNG
Sbjct: 181 AENFAYRLELNG 192
>FB|FBgn0259794 [details] [associations]
symbol:sinah "sina homologue" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007423 "sensory organ development"
evidence=ISS] [GO:0045676 "regulation of R7 cell differentiation"
evidence=ISS] [GO:0016874 "ligase activity" evidence=ISS]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 EMBL:AE014296
GO:GO:0007423 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0010498 SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0045676
GeneTree:ENSGT00390000005434 KO:K04506 PANTHER:PTHR10315
EMBL:AY089445 RefSeq:NP_648927.1 UniGene:Dm.29700
ProteinModelPortal:Q8T3Y0 SMR:Q8T3Y0 DIP:DIP-17367N IntAct:Q8T3Y0
MINT:MINT-288495 STRING:Q8T3Y0 EnsemblMetazoa:FBtr0301683
GeneID:39885 KEGG:dme:Dmel_CG13030 UCSC:CG13030-RB CTD:39885
FlyBase:FBgn0259794 eggNOG:NOG308883 InParanoid:Q8T3Y0 OMA:LMSSHEN
OrthoDB:EOG4K3JBV PhylomeDB:Q8T3Y0 GenomeRNAi:39885 NextBio:815894
Bgee:Q8T3Y0 GermOnline:CG13030 Uniprot:Q8T3Y0
Length = 351
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 122/255 (47%), Positives = 166/255 (65%)
Query: 47 AGTSTD-LASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAM 105
+G D L +L ECPVCF Y++PPI+QC GHL+CS CR KL+ CP CR + NIR+LAM
Sbjct: 93 SGARDDFLMALLECPVCFGYIMPPIMQCPRGHLICSTCRSKLTICPVCRVFMTNIRSLAM 152
Query: 106 EKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAH 165
EKVA + FPC++ GC L + EK +HE+ CE RPY CP P C W G L V H
Sbjct: 153 EKVASKLIFPCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQH 212
Query: 166 LNQSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFA 225
L SH+++ T++G DI+FLAT++NL GA+DW M+QSC G HF+L LEK + Q +F
Sbjct: 213 LMSSHENVITMEGNDIIFLATNVNLEGALDWTMVQSCHGRHFLLSLEKINLGEDCQQYFT 272
Query: 226 IVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLF 285
++IGS K + F Y + L + R L W++ PRSI E +S N+D LV + + +LF
Sbjct: 273 ACRMIGSMKDAAEFVYNISLEAYNRTLRWQSKPRSIRENFSS-FTNADFLVLNKHTVELF 331
Query: 286 ADNGNLGINVTIGTV 300
+++GNL +NV I V
Sbjct: 332 SEDGNLALNVVIRKV 346
>UNIPROTKB|F1NXB7 [details] [associations]
symbol:F1NXB7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR018121
Pfam:PF03145 GO:GO:0007275 GO:GO:0005634 GO:GO:0006511
SUPFAM:SSF49599 GeneTree:ENSGT00390000005434 PANTHER:PTHR10315
OMA:KYVSSRR EMBL:AADN02005444 IPI:IPI00591575
Ensembl:ENSGALT00000027437 Uniprot:F1NXB7
Length = 297
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 98/191 (51%), Positives = 130/191 (68%)
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYL--CPCPGASCKWGGALDQVMAHLNQ 168
T + R++ + C I +H H H P L C CP SC W G L+ V++HL Q
Sbjct: 100 THYITHRHKQH-C-IHHIHHFHLSHHHEAVHDPQLVPCTCPLFSCPWEGHLEVVVSHLRQ 157
Query: 169 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQ 228
+H+ I LQG +IVFLATD++LP DW++M SC GH F+LVL KQEK+ GH FFA +
Sbjct: 158 THR-INILQGAEIVFLATDMHLPAPTDWIIMHSCLGHQFLLVLRKQEKYKGHPQFFATMM 216
Query: 229 LIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADN 288
LIG++ Q++NFTYRLELN ++RRL WEATPRS+ E + S I + DCLV +T++AQLFADN
Sbjct: 217 LIGTQTQADNFTYRLELNRNQRRLKWEATPRSVLECIDSIISDGDCLVLNTSLAQLFADN 276
Query: 289 GNLGINVTIGT 299
G+L I + I T
Sbjct: 277 GSLAIGIAITT 287
>UNIPROTKB|Q8IW03 [details] [associations]
symbol:SIAH3 "Seven in absentia homolog 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS51081
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0006511
SUPFAM:SSF49599 PANTHER:PTHR10315 EMBL:AL157819 EMBL:BC041372
EMBL:AK096522 IPI:IPI00217090 RefSeq:NP_942146.2 UniGene:Hs.368483
HSSP:Q8IUQ4 ProteinModelPortal:Q8IW03 SMR:Q8IW03 STRING:Q8IW03
DMDM:189046787 DNASU:283514 Ensembl:ENST00000400405 GeneID:283514
KEGG:hsa:283514 UCSC:uc001vap.3 CTD:283514 GeneCards:GC13M046353
HGNC:HGNC:30553 neXtProt:NX_Q8IW03 PharmGKB:PA164725697
eggNOG:NOG324659 HOGENOM:HOG000154320 InParanoid:Q8IW03 OMA:KYVSSRR
OrthoDB:EOG43XV47 GenomeRNAi:283514 NextBio:94001 Bgee:Q8IW03
Genevestigator:Q8IW03 Uniprot:Q8IW03
Length = 269
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 91/173 (52%), Positives = 119/173 (68%)
Query: 129 HTEKPEHEDTCEHR----PYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFL 184
H H++ H P LC CP SC+W G L+ V+ HL Q H+ + LQG +IVFL
Sbjct: 86 HPHHLHHQEAGLHANPVTPCLCMCPLFSCQWEGRLEVVVPHLRQIHR-VDILQGAEIVFL 144
Query: 185 ATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLE 244
ATD++LP DW++M SC GHHF+LVL KQE+ +GH FFA + LIG+ Q++ FTYRLE
Sbjct: 145 ATDMHLPAPADWIIMHSCLGHHFLLVLRKQERHEGHPQFFATMMLIGTPTQADCFTYRLE 204
Query: 245 LNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTI 297
LN + RRL WEATPRS+ E V S I + DCLV +T++AQLF+DNG+L I + I
Sbjct: 205 LNRNHRRLKWEATPRSVLECVDSVITDGDCLVLNTSLAQLFSDNGSLAIGIAI 257
>UNIPROTKB|F1PLU4 [details] [associations]
symbol:SIAH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR018121 Pfam:PF03145 GO:GO:0007275 GO:GO:0005634
GO:GO:0006511 SUPFAM:SSF49599 GeneTree:ENSGT00390000005434
PANTHER:PTHR10315 OMA:KYVSSRR EMBL:AAEX03013141
Ensembl:ENSCAFT00000007277 Uniprot:F1PLU4
Length = 266
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 129 HTEKPEHEDTCEHRPYL--CPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLAT 186
H H++ H + C CP SC+W G L+ V+ HL Q H+ + LQG +IVFLAT
Sbjct: 85 HPHHLHHQEAGLHATQVTPCMCPLFSCQWEGHLEVVVPHLRQMHR-VDILQGAEIVFLAT 143
Query: 187 DINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELN 246
D++LP DW++M SC GHHF+LVL KQE+ +GH FFA + LIG+ Q++ FTYRLELN
Sbjct: 144 DMHLPAPADWIIMHSCLGHHFLLVLRKQERHEGHPQFFATMMLIGTPTQADCFTYRLELN 203
Query: 247 GHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTI 297
+ RRL WEATPRS+ E V S I + DCLV +T++AQLF+DNG+L I + I
Sbjct: 204 RNHRRLKWEATPRSVLECVDSVITDGDCLVLNTSLAQLFSDNGSLAIGIAI 254
>UNIPROTKB|J9NYA3 [details] [associations]
symbol:SIAH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR018121 Pfam:PF03145 GO:GO:0007275 GO:GO:0005634
GO:GO:0006511 SUPFAM:SSF49599 GeneTree:ENSGT00390000005434
PANTHER:PTHR10315 EMBL:AAEX03013141 Ensembl:ENSCAFT00000049406
Uniprot:J9NYA3
Length = 268
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 129 HTEKPEHEDTCEHRPYL--CPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLAT 186
H H++ H + C CP SC+W G L+ V+ HL Q H+ + LQG +IVFLAT
Sbjct: 87 HPHHLHHQEAGLHATQVTPCMCPLFSCQWEGHLEVVVPHLRQMHR-VDILQGAEIVFLAT 145
Query: 187 DINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELN 246
D++LP DW++M SC GHHF+LVL KQE+ +GH FFA + LIG+ Q++ FTYRLELN
Sbjct: 146 DMHLPAPADWIIMHSCLGHHFLLVLRKQERHEGHPQFFATMMLIGTPTQADCFTYRLELN 205
Query: 247 GHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTI 297
+ RRL WEATPRS+ E V S I + DCLV +T++AQLF+DNG+L I + I
Sbjct: 206 RNHRRLKWEATPRSVLECVDSVITDGDCLVLNTSLAQLFSDNGSLAIGIAI 256
>RGD|2324160 [details] [associations]
symbol:LOC100366198 "seven in absentia homolog 3-like"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR018121 Pfam:PF03145 RGD:2324160 GO:GO:0007275
GO:GO:0005634 GO:GO:0006511 SUPFAM:SSF49599
GeneTree:ENSGT00390000005434 PANTHER:PTHR10315 IPI:IPI00359721
Ensembl:ENSRNOT00000064945 Uniprot:F1M4M8
Length = 224
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 91/170 (53%), Positives = 119/170 (70%)
Query: 128 LHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATD 187
LH ++P T + P C CP SC+W G L+ V+ HL Q H+ I L G +IVFLATD
Sbjct: 46 LHHQEPGLHST-QMTP--CICPLFSCQWEGHLEVVVPHLRQIHR-IDILHGAEIVFLATD 101
Query: 188 INLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLELNG 247
++LP DW++M SC GHHF+LVL KQE+ +GH FFA + LIG+ Q++ FTYRLELN
Sbjct: 102 MHLPAPADWIIMHSCLGHHFLLVLRKQERHEGHPQFFATMMLIGTPTQADCFTYRLELNR 161
Query: 248 HRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFADNGNLGINVTI 297
+ RRL WEATPRS+ E V S I + DCLV +T++AQLF+DNG+L I + I
Sbjct: 162 NHRRLKWEATPRSVLECVDSVITDGDCLVLNTSLAQLFSDNGSLAIGIAI 211
>TAIR|locus:2095848 [details] [associations]
symbol:SINAT2 "seven in absentia of Arabidopsis 2"
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;ISS] [GO:0007275 "multicellular
organismal development" evidence=IEA;ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 EMBL:AL132977 Gene3D:3.90.890.10 eggNOG:NOG264215
HOGENOM:HOG000231487 KO:K04506 PANTHER:PTHR10315
ProtClustDB:CLSN2683805 EMBL:BT025655 EMBL:AK229466 EMBL:AY087768
IPI:IPI00537527 IPI:IPI00786165 PIR:T46026 RefSeq:NP_191363.1
UniGene:At.34771 ProteinModelPortal:Q9M2P4 SMR:Q9M2P4 IntAct:Q9M2P4
STRING:Q9M2P4 EnsemblPlants:AT3G58040.1 GeneID:824973
KEGG:ath:AT3G58040 TAIR:At3g58040 InParanoid:Q9M2P4 OMA:FAACRMI
PhylomeDB:Q9M2P4 Genevestigator:Q9M2P4 GermOnline:AT3G58040
Uniprot:Q9M2P4
Length = 308
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 91/248 (36%), Positives = 132/248 (53%)
Query: 56 LFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEKVAGTMWF 114
L ECPVC + + PPI QC +GH +CSNC+ ++ + CPTCR LGNIR LA+EKVA ++
Sbjct: 57 LLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEV 116
Query: 115 PCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSIT 174
PCRYQ GC + K +HE C RPY CP G+ C G + ++ HL HK +
Sbjct: 117 PCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHK-VD 175
Query: 175 TLQGEDIVFLATDINLPGAVD---WVM-MQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLI 230
G N P V+ W++ + +CFG F L E + + A ++ +
Sbjct: 176 MHDGCTFNHRYVKSN-PHEVENATWMLTVFNCFGRQFCLHFEAFQ-LGMAPVYMAFLRFM 233
Query: 231 GSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA--DN 288
G +++ F+Y LE+ H R+LTW+ PRSI + + D L+ N+A F+ D
Sbjct: 234 GDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDR 293
Query: 289 GNLGINVT 296
L + VT
Sbjct: 294 QELKLRVT 301
>TAIR|locus:2076810 [details] [associations]
symbol:AT3G61790 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0007275 "multicellular organismal development"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0007275 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:AL132959
GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10 eggNOG:NOG264215
HOGENOM:HOG000231487 KO:K04506 PANTHER:PTHR10315
ProtClustDB:CLSN2683805 EMBL:BT003967 EMBL:BT005079 EMBL:AY084712
IPI:IPI00544953 PIR:T47971 RefSeq:NP_567118.1 UniGene:At.21009
ProteinModelPortal:Q84JL3 SMR:Q84JL3 IntAct:Q84JL3
EnsemblPlants:AT3G61790.1 GeneID:825352 KEGG:ath:AT3G61790
TAIR:At3g61790 InParanoid:Q84JL3 OMA:EACEFRP PhylomeDB:Q84JL3
Genevestigator:Q84JL3 GermOnline:AT3G61790 Uniprot:Q84JL3
Length = 326
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 89/255 (34%), Positives = 135/255 (52%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEK 107
T+T + L ECPVC + + PPI QC +GH +CS C+ ++ + CPTCR LG+IR LA+EK
Sbjct: 53 TTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEK 112
Query: 108 VAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLN 167
VA ++ PC++ GC + K +HE C RPY CP G+ C G + ++AHL
Sbjct: 113 VAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLR 172
Query: 168 QSHKSITTLQGEDIVFLATDINLPGAVD---WVM-MQSCFGHHFMLVLEKQEKFDGHQHF 223
HK + G N P V+ W++ + CFG +F L E + +
Sbjct: 173 DDHK-VDMHSGCTFNHRYVKSN-PREVENATWMLTVFHCFGQYFCLHFEAFQ-LGMAPVY 229
Query: 224 FAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQ 283
A ++ +G ++ N+ Y LE+ G+ R+L WE TPRS+ + + D L+ N+A
Sbjct: 230 MAFLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMAL 289
Query: 284 LFA--DNGNLGINVT 296
F+ D L + VT
Sbjct: 290 FFSGGDRKELKLRVT 304
>TAIR|locus:2137395 [details] [associations]
symbol:AT4G27880 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0007275 "multicellular organismal development"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275 GO:GO:0005739
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL078579 EMBL:AL161571 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 SUPFAM:SSF49599
Gene3D:3.90.890.10 eggNOG:NOG264215 HOGENOM:HOG000231487 KO:K04506
PANTHER:PTHR10315 OMA:METDSME ProtClustDB:CLSN2683805 EMBL:BX826742
IPI:IPI00526488 PIR:T09027 RefSeq:NP_194517.1 UniGene:At.32065
ProteinModelPortal:Q9STN8 SMR:Q9STN8 EnsemblPlants:AT4G27880.1
GeneID:828901 KEGG:ath:AT4G27880 TAIR:At4g27880 InParanoid:Q9STN8
PhylomeDB:Q9STN8 Genevestigator:Q9STN8 GermOnline:AT4G27880
Uniprot:Q9STN8
Length = 327
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 95/293 (32%), Positives = 145/293 (49%)
Query: 11 DSNPNHTVGIVGSKKHGPGNGLXXXXXXXXXXXXXXAGTSTDLASLFECPVCFDYVLPPI 70
+ N + + +K HG G +T + L ECPVC + PPI
Sbjct: 19 NGNGHQSYQFSSTKTHG---GAAAAAVVTNIVGPTATAPATSVYELLECPVCTYSMYPPI 75
Query: 71 IQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEKVAGTMWFPCRYQMNGCGISLLH 129
QC +GH +CS C+ ++ + CPTCR LG+IR LA+EKVA ++ PC++ GC +
Sbjct: 76 HQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGCPEIFPY 135
Query: 130 TEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITTLQGEDIVFLATDIN 189
K +HE C RPY CP G+ C G + ++AHL HK + G N
Sbjct: 136 YSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHK-VDMHAGSTFNHRYVKSN 194
Query: 190 LPGAVD---WVM-MQSCFGHHFMLVLEKQEKFDGHQHFFAIVQLIGSRKQSENFTYRLEL 245
P V+ W++ + CFG +F L E + G + A ++ +G + + +++Y LE+
Sbjct: 195 -PREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPV-YMAFLRFMGDEEDARSYSYSLEV 252
Query: 246 NGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQLFA--DNGNLGINVT 296
G R+LTWE TPRSI + ++D L+ N+A F+ D L + VT
Sbjct: 253 GGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRVT 305
>TAIR|locus:2064642 [details] [associations]
symbol:AT2G41980 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0007275 "multicellular organismal development"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
EMBL:U90439 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10 eggNOG:NOG264215
HOGENOM:HOG000231487 KO:K04506 PANTHER:PTHR10315 IPI:IPI00523341
PIR:E84848 RefSeq:NP_181729.1 UniGene:At.53097
ProteinModelPortal:P93748 SMR:P93748 STRING:P93748
EnsemblPlants:AT2G41980.1 GeneID:818798 KEGG:ath:AT2G41980
TAIR:At2g41980 InParanoid:P93748 OMA:IDPPKNE PhylomeDB:P93748
ProtClustDB:CLSN2683805 Genevestigator:P93748 GermOnline:AT2G41980
Uniprot:P93748
Length = 305
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 90/255 (35%), Positives = 134/255 (52%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEK 107
+S + L ECPVC + + PPI QC +GH +CS+C+ ++ + CPTCR LGNIR LA+EK
Sbjct: 47 SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK 106
Query: 108 VAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLN 167
VA ++ PCRYQ GC + K +HE C R Y CP G+ C G + ++ HL
Sbjct: 107 VAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLK 166
Query: 168 QSHKSITTLQGEDIVFLATDINLPGAVD---WVM-MQSCFGHHFMLVLEKQEKFDGHQHF 223
HK + G N P V+ W++ + +CFG F L E + +
Sbjct: 167 DDHK-VDMHDGCTFNHRYVKSN-PHEVENATWMLTVFNCFGRQFCLHFEAFQ-LGMAPVY 223
Query: 224 FAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDCLVFDTNIAQ 283
A ++ +G +++ F+Y LE+ H R+LTW+ PRSI + + D L+ N+A
Sbjct: 224 MAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLAL 283
Query: 284 LFA--DNGNLGINVT 296
F+ D L + VT
Sbjct: 284 YFSGSDKEELKLRVT 298
>UNIPROTKB|C9J9D7 [details] [associations]
symbol:SIAH2 "E3 ubiquitin-protein ligase SIAH2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031396 "regulation of protein ubiquitination"
evidence=IEA] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS51081 GO:GO:0007275
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0006511
GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10 PANTHER:PTHR10315
HGNC:HGNC:10858 ChiTaRS:SIAH2 EMBL:AC011317 IPI:IPI00946273
ProteinModelPortal:C9J9D7 SMR:C9J9D7 STRING:C9J9D7
Ensembl:ENST00000482706 ArrayExpress:C9J9D7 Bgee:C9J9D7
Uniprot:C9J9D7
Length = 83
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 60/83 (72%), Positives = 69/83 (83%)
Query: 105 MEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMA 164
MEKVA + FPC+Y GC ++L HTEKPEHED CE+RPY CPCPGASCKW G+L+ VM+
Sbjct: 1 MEKVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMS 60
Query: 165 HLNQSHKSITTLQGEDIVFLATD 187
HL +HKSITTLQGEDIVFLATD
Sbjct: 61 HLMHAHKSITTLQGEDIVFLATD 83
>UNIPROTKB|H3BU09 [details] [associations]
symbol:SIAH1 "E3 ubiquitin-protein ligase SIAH1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0051402 "neuron
apoptotic process" evidence=IEA] InterPro:IPR001841
InterPro:IPR004162 PROSITE:PS50089 SMART:SM00184 GO:GO:0007275
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0051402 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0005769 GO:GO:0042787 GO:GO:0031648 EMBL:AC023818
EMBL:AC026470 PANTHER:PTHR10315 HGNC:HGNC:10857
Ensembl:ENST00000563745 Bgee:H3BU09 Uniprot:H3BU09
Length = 98
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 58/68 (85%), Positives = 65/68 (95%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
++ DLASLFECPVCFDYVLPPI+QCQSGHLVCSNCRPKL+CCPTCRGPLG+IRNLAMEKV
Sbjct: 31 SNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV 90
Query: 109 AGTMWFPC 116
A ++ FPC
Sbjct: 91 ANSVLFPC 98
>TAIR|locus:2153804 [details] [associations]
symbol:AT5G37870 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;ISS] [GO:0007275 "multicellular
organismal development" evidence=IEA;ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR015880 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 SMART:SM00184 SMART:SM00355 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0007275 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 Gene3D:3.90.890.10 PANTHER:PTHR10315 EMBL:AB012241
HOGENOM:HOG000154324 IPI:IPI00520206 RefSeq:NP_198603.1
UniGene:At.55198 ProteinModelPortal:Q9FKD9 SMR:Q9FKD9
EnsemblPlants:AT5G37870.1 GeneID:833765 KEGG:ath:AT5G37870
TAIR:At5g37870 eggNOG:NOG262536 InParanoid:Q9FKD9 OMA:STHEKIC
PhylomeDB:Q9FKD9 Genevestigator:Q9FKD9 Uniprot:Q9FKD9
Length = 281
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 47/126 (37%), Positives = 72/126 (57%)
Query: 51 TDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEKVA 109
TDL + +CP+C+ + P+ QC +GHL CS+C PKL + CP C P+G+IR AME+V
Sbjct: 38 TDL-DILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVL 96
Query: 110 GTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQS 169
++ PCRY GC ++ + + HE C P C CP C + G+ + H + +
Sbjct: 97 ESVLVPCRYADLGCTKTIYYGRESTHEKICNFSP--CSCPVQGCNYTGSYKDLYEHYDLT 154
Query: 170 HKSITT 175
H + +T
Sbjct: 155 HSTGST 160
>TAIR|locus:2153774 [details] [associations]
symbol:AT5G37910 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0007275 "multicellular organismal development"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0007275 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 Gene3D:3.90.890.10 PANTHER:PTHR10315 EMBL:AB012241
HOGENOM:HOG000154324 IPI:IPI00537805 RefSeq:NP_198607.1
UniGene:At.55201 ProteinModelPortal:Q9FKD5 SMR:Q9FKD5 PaxDb:Q9FKD5
PRIDE:Q9FKD5 EnsemblPlants:AT5G37910.1 GeneID:833770
KEGG:ath:AT5G37910 TAIR:At5g37910 eggNOG:NOG249869
InParanoid:Q9FKD5 OMA:NKCHICS PhylomeDB:Q9FKD5
ProtClustDB:CLSN2916564 Genevestigator:Q9FKD5 Uniprot:Q9FKD5
Length = 276
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 44/122 (36%), Positives = 65/122 (53%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSC-CPTCRGPLGNIRNLAMEKVAG 110
DL + +CP+C + + PI QC +GHL C +C PKLS CP C P+G+ R+ AME V
Sbjct: 32 DL-DILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLE 90
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
++ PC GC S + ++ HE C C CP + C + G+ + AH +H
Sbjct: 91 SILIPCPNVRFGCTKSFFYGKESAHEKECIFSQ--CSCPSSVCDYTGSYKDLYAHYKLTH 148
Query: 171 KS 172
+
Sbjct: 149 ST 150
>TAIR|locus:2195175 [details] [associations]
symbol:AT1G66620 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0007275 "multicellular organismal development"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 EMBL:AC079285 Gene3D:3.90.890.10 PANTHER:PTHR10315
HOGENOM:HOG000154324 IPI:IPI00541847 PIR:B96692 RefSeq:NP_176835.1
UniGene:At.17506 UniGene:At.52405 ProteinModelPortal:Q9C6H3
SMR:Q9C6H3 EnsemblPlants:AT1G66620.1 GeneID:842980
KEGG:ath:AT1G66620 TAIR:At1g66620 eggNOG:NOG244693
InParanoid:Q9C6H3 OMA:QERETEF PhylomeDB:Q9C6H3
ProtClustDB:CLSN2681781 Genevestigator:Q9C6H3 Uniprot:Q9C6H3
Length = 313
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 43/125 (34%), Positives = 66/125 (52%)
Query: 47 AGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAM 105
+GT +L L +CP+C + PI QC +GH+ CS+C KL + CP+C P+GN R+ M
Sbjct: 33 SGTLFEL-DLLDCPICCHALTSPIFQCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIM 91
Query: 106 EKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAH 165
E+V + C +GC + ++ HE C R LC CP +C + G + +H
Sbjct: 92 ERVVEAVMVTCPNVKHGCTEKFSYGKELIHEKDC--RFALCYCPAPNCNYSGVYKDLYSH 149
Query: 166 LNQSH 170
+H
Sbjct: 150 FYVNH 154
>TAIR|locus:2153754 [details] [associations]
symbol:AT5G37890 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;ISS] [GO:0007275 "multicellular
organismal development" evidence=IEA;ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR015880 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 SMART:SM00184 SMART:SM00355 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0007275 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 Gene3D:3.90.890.10 PANTHER:PTHR10315 EMBL:AB012241
HOGENOM:HOG000154324 EMBL:AY072436 EMBL:AY114722 IPI:IPI00528062
RefSeq:NP_198605.2 UniGene:At.30456 ProteinModelPortal:Q9FKD7
SMR:Q9FKD7 IntAct:Q9FKD7 EnsemblPlants:AT5G37890.1 GeneID:833768
KEGG:ath:AT5G37890 TAIR:At5g37890 eggNOG:NOG324843
InParanoid:Q9FKD7 OMA:NNKCPAC PhylomeDB:Q9FKD7
ProtClustDB:CLSN2917844 Genevestigator:Q9FKD7 Uniprot:Q9FKD7
Length = 286
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSC-CPTCRGPLGNIRNLAMEKVAG 110
DL + +CP+C++ PI QC +GHL CS+C PKL+ CP C P+G+ R AME V
Sbjct: 45 DL-EILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLE 103
Query: 111 TMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSH 170
++ PC GC ++ + ++ HE C C CP C + + + H +H
Sbjct: 104 SILIPCPNAKLGCKKNVSYGKELTHEKECMFSH--CACPALDCNYTSSYKDLYTHYRITH 161
Query: 171 KSITTL 176
I +
Sbjct: 162 MEINQI 167
>TAIR|locus:2153784 [details] [associations]
symbol:AT5G37930 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0007275 "multicellular organismal development"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR015880 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00355
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 Gene3D:3.90.890.10 PANTHER:PTHR10315 EMBL:AB012241
EMBL:BT004120 EMBL:BT004967 IPI:IPI00545512 RefSeq:NP_198609.1
UniGene:At.30452 HSSP:O95628 ProteinModelPortal:Q84K34 SMR:Q84K34
EnsemblPlants:AT5G37930.1 GeneID:833772 KEGG:ath:AT5G37930
TAIR:At5g37930 eggNOG:NOG266944 HOGENOM:HOG000154324
InParanoid:Q84K34 OMA:KTTILQE PhylomeDB:Q84K34
ProtClustDB:CLSN2916629 Genevestigator:Q84K34 Uniprot:Q84K34
Length = 349
Score = 197 (74.4 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 40/117 (34%), Positives = 57/117 (48%)
Query: 56 LFECPVCFDYVLPPIIQCQSGHLVCSNCRPKL-SCCPTCRGPLGNIRNLAMEKVAGTMWF 114
+ +CP+C + + PI QC +GHL C+ C K+ + CP+C P+G +R AMEKV
Sbjct: 110 VLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRV 169
Query: 115 PCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHK 171
C GC S + + HE C P C CP C + G + H+ HK
Sbjct: 170 SCLNAKYGCKESTSYGNRFSHEQVCVFTP--CSCPILDCHYTGYYKDLNNHVRAEHK 224
Score = 38 (18.4 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 284 LFADNGNLGINVTIG 298
LF+ N NL + + IG
Sbjct: 327 LFSGNDNLNLQIWIG 341
>TAIR|locus:2033369 [details] [associations]
symbol:AT1G66650 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;ISS] [GO:0007275 "multicellular
organismal development" evidence=IEA;ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015880
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0006511 GO:GO:0004842 EMBL:AC013288
SUPFAM:SSF49599 EMBL:AC079285 Gene3D:3.90.890.10 PANTHER:PTHR10315
HOGENOM:HOG000154324 eggNOG:NOG244693 IPI:IPI00541249
RefSeq:NP_849853.1 UniGene:At.35744 ProteinModelPortal:Q9C9M0
SMR:Q9C9M0 PaxDb:Q9C9M0 PRIDE:Q9C9M0 EnsemblPlants:AT1G66650.1
GeneID:842983 KEGG:ath:AT1G66650 TAIR:At1g66650 InParanoid:Q9C9M0
PhylomeDB:Q9C9M0 Genevestigator:Q9C9M0 Uniprot:Q9C9M0
Length = 329
Score = 200 (75.5 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 43/120 (35%), Positives = 59/120 (49%)
Query: 54 ASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSC-CPTCRGPLGNIRNLAMEKVAGTM 112
+++ ECP CFD + PI QC +GHL C C KL C C+ P+G++R AMEKV
Sbjct: 81 SNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAMEKVIKAG 140
Query: 113 WFPCRYQMNGCGISLLH-TEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHK 171
C + GC S + + HE C P C CP C + G ++ H +HK
Sbjct: 141 LVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAP--CSCPIKDCNYIGFYKDLINHFRATHK 198
>TAIR|locus:2195180 [details] [associations]
symbol:AT1G66630 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR004162 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR018121
Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
SUPFAM:SSF49599 EMBL:AC079285 Gene3D:3.90.890.10 PANTHER:PTHR10315
HOGENOM:HOG000154324 UniGene:At.17506 ProtClustDB:CLSN2681781
IPI:IPI00534268 PIR:C96692 RefSeq:NP_176836.1
ProteinModelPortal:Q9C6H2 SMR:Q9C6H2 EnsemblPlants:AT1G66630.1
GeneID:842981 KEGG:ath:AT1G66630 TAIR:At1g66630 eggNOG:KOG3002
InParanoid:Q9C6H2 PhylomeDB:Q9C6H2 Genevestigator:Q9C6H2
Uniprot:Q9C6H2
Length = 303
Score = 196 (74.1 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 39/120 (32%), Positives = 59/120 (49%)
Query: 56 LFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSC-CPTCRGPLGNIRNLAMEKVAGTMWF 114
L +CP+C+ + PI QC +GH+ CS+C K+ CP C +G R+ +EK+ +
Sbjct: 46 LLDCPICYHKLGAPIYQCDNGHIACSSCCKKVKYKCPYCSLRIGFFRSRILEKIVEAVVV 105
Query: 115 PCRYQMNGCGISLLHTEKPE--HEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKS 172
C GC + + + E HE CE LC CP CK+ G + H + HK+
Sbjct: 106 SCPNAKYGCTEKIPYDNESESAHERVCEFT--LCYCPEPECKYTGVYTDLYRHYHAEHKT 163
>TAIR|locus:2033354 [details] [associations]
symbol:AT1G66660 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS51081
GO:GO:0007275 EMBL:CP002684 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0006511 GO:GO:0004842 SUPFAM:SSF49599
Gene3D:3.90.890.10 PANTHER:PTHR10315 IPI:IPI00531371
RefSeq:NP_001077779.1 UniGene:At.35743 ProteinModelPortal:F4IEX9
SMR:F4IEX9 EnsemblPlants:AT1G66660.2 GeneID:842984
KEGG:ath:AT1G66660 OMA:NQSSHEK Uniprot:F4IEX9
Length = 348
Score = 196 (74.1 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 54 ASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSC-CPTCRGPLGNIRNLAMEKVAGTM 112
+ + +CP C + + PI QC +GHL CS+C KL+ C CR +G+IR AMEKV
Sbjct: 101 SDVLDCPTCCEPLKRPIYQCSNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAMEKVIEAS 160
Query: 113 WFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKS 172
PC +GC + + + HE C+ C CP ++C + + + +H S
Sbjct: 161 IVPCPNAKHGCKETTTYCNQSSHEKVCKF--VRCSCPVSNCNYVSSYSNLKSHAC----S 214
Query: 173 ITTLQGEDIVFLATDINLP 191
+ GED + I+ P
Sbjct: 215 TAHVWGEDDIHFQLVIDRP 233
>TAIR|locus:2091581 [details] [associations]
symbol:SINA2 "AT3G13672" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISS] [GO:0007275
"multicellular organismal development" evidence=IEA;ISS]
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR018121
Pfam:PF03145 GO:GO:0007275 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0006511 SUPFAM:SSF49599 PANTHER:PTHR10315
IPI:IPI00548557 RefSeq:NP_974306.1 UniGene:At.19060
UniGene:At.48655 ProteinModelPortal:F4JDF6
EnsemblPlants:AT3G13672.2 GeneID:820573 KEGG:ath:AT3G13672
OMA:MEPRIND PhylomeDB:F4JDF6 Uniprot:F4JDF6
Length = 220
Score = 177 (67.4 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 48/196 (24%), Positives = 89/196 (45%)
Query: 100 IRNLAME-KVAGTMWFPCRYQMNGCGISLLHTEKP-EHEDTCEHRPYLCPCPGASCKWGG 157
I +L +E +V + FP I + + P +H + + +PY CP GA C G
Sbjct: 5 INDLQVESRVHELLDFPVHTNQISSAIYEILLQCPNDHIENPKKKPYNCPHSGAKCDVTG 64
Query: 158 ALDQVMAHLNQSHKSITTLQGEDIV--FLATDINLPGAVDWVM-MQSCFGHHFMLVLEKQ 214
+ +++ HL H ++ G ++ D W++ + C G F L E
Sbjct: 65 DIQRLLLHLRNDH-NVEMSDGRSFSHRYVHHDPKHLHHATWMLTLLDCCGRKFCLYFEAF 123
Query: 215 EKFDGHQHFFAIVQLIGSRKQSENFTYRLELNGHRRRLTWEATPRSIHEGVASAIMNSDC 274
+ A +Q +G +++ +F+Y L++ G+ R+LTW+ PRSI + + + D
Sbjct: 124 H-LRKTPMYMAFMQFMGDEEEAMSFSYSLQVGGNGRKLTWQGVPRSIRDSHKTVRDSQDG 182
Query: 275 LVFDTNIAQLFADNGN 290
L+ +A F+ + N
Sbjct: 183 LIITRKLALFFSTDNN 198
>FB|FBgn0024997 [details] [associations]
symbol:CG2681 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR004162
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00390000005434 PANTHER:PTHR10315 FlyBase:FBgn0024997
EMBL:BT044595 RefSeq:NP_570022.2 UniGene:Dm.12234 SMR:Q9W4W4
IntAct:Q9W4W4 MINT:MINT-1001975 EnsemblMetazoa:FBtr0070480
GeneID:31258 KEGG:dme:Dmel_CG2681 UCSC:CG2681-RA InParanoid:Q9W4W4
OMA:LCAKAHF GenomeRNAi:31258 NextBio:772708 Uniprot:Q9W4W4
Length = 626
Score = 192 (72.6 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 38/114 (33%), Positives = 52/114 (45%)
Query: 59 CPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKVAGTMWFPCRY 118
CP C + PI+ C+SGH VC C L CP C+ P N R+L +E + F C +
Sbjct: 206 CPGCAGAMKAPILLCKSGHSVCEQCTRILLMCPLCKEPFTNSRSLTVEALCAKAHFRCGH 265
Query: 119 QMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGA--SCKWGGALDQVMAHLNQSH 170
GC + + P HE C ++P C C+W G Q HL + H
Sbjct: 266 ASGGCQVRMPVVLLPWHEQQCMYKPMKCFMGRVWGDCRWQGREVQWKEHLEEQH 319
>TAIR|locus:2195170 [details] [associations]
symbol:AT1G66610 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR004162 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 InterPro:IPR018121 Pfam:PF03145 PROSITE:PS50089
PROSITE:PS51081 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 SUPFAM:SSF49599 EMBL:AC079285 Gene3D:3.90.890.10
PANTHER:PTHR10315 HOGENOM:HOG000154324 EMBL:DQ446403
IPI:IPI00537706 IPI:IPI00759372 PIR:A96692 RefSeq:NP_001185331.1
RefSeq:NP_176834.1 UniGene:At.52404 ProteinModelPortal:Q9C6H4
SMR:Q9C6H4 EnsemblPlants:AT1G66610.1 GeneID:842979
KEGG:ath:AT1G66610 TAIR:At1g66610 eggNOG:NOG246926
InParanoid:Q9C6H4 PhylomeDB:Q9C6H4 Genevestigator:Q9C6H4
Uniprot:Q9C6H4
Length = 366
Score = 136 (52.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 47 AGTSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSC-CPTCRGPLGNIRNLAM 105
+GT +L L +CP+C + + PI QC GH+ CS+C +S CP C +GN R+ M
Sbjct: 45 SGTLFEL-DLLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIM 103
Query: 106 EKVAGTMWFPC 116
E+V C
Sbjct: 104 ERVVEAFIVRC 114
Score = 84 (34.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 119 QMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAHLNQSHKSITT 175
+ NGC + + + HE C LC CP +C + G + +H +HK + T
Sbjct: 182 RQNGCTETFSYGNELVHEKKCSFA--LCYCPAPNCNYAGVYKDLYSHYAANHKKLWT 236
>FB|FBgn0052486 [details] [associations]
symbol:CG32486 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013323 PROSITE:PS50089
PROSITE:PS50145 SMART:SM00184 Prosite:PS00518 EMBL:AE014296
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 SUPFAM:SSF49599 eggNOG:NOG247616
GeneTree:ENSGT00390000018258 OMA:RIGCPWQ EMBL:AY052026
RefSeq:NP_647765.1 UniGene:Dm.830 ProteinModelPortal:Q9VZV5
SMR:Q9VZV5 DIP:DIP-21068N IntAct:Q9VZV5 MINT:MINT-765733
PaxDb:Q9VZV5 EnsemblMetazoa:FBtr0073004 GeneID:38367
KEGG:dme:Dmel_CG32486 UCSC:CG32486-RD FlyBase:FBgn0052486
InParanoid:Q9VZV5 OrthoDB:EOG43R238 PhylomeDB:Q9VZV5
GenomeRNAi:38367 NextBio:808238 Bgee:Q9VZV5 Gene3D:3.90.890.10
Uniprot:Q9VZV5
Length = 412
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 36/121 (29%), Positives = 51/121 (42%)
Query: 59 CPVCFDYVLPPIIQCQSGHLVCSNC----------RPKLSCCPTCRGPLGNI---RNLAM 105
C VC D + QCQ GHL+C+ C R +++ CP CR + RNLA+
Sbjct: 113 CAVCLDLPKTAMYQCQMGHLMCAACFTHLLADGRLRDQIATCPNCRVEISKSTASRNLAV 172
Query: 106 EKVAGTMWFPCRYQMNGCGISLLHTEKPEHED-TCEHRPYLCPCPGASCKWGGALDQVMA 164
EK A + C++ C + HE C+ RP C C+W G +
Sbjct: 173 EKAASELPSECQF----CNKEFPYKSLERHEQHECQERPTKCKYHRIGCQWRGPYHETNE 228
Query: 165 H 165
H
Sbjct: 229 H 229
>FB|FBgn0085404 [details] [associations]
symbol:CG34375 species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001841
InterPro:IPR001478 InterPro:IPR004162 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 EMBL:AE014297
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 SUPFAM:SSF50156
PANTHER:PTHR10315 eggNOG:NOG246926 EMBL:BT088946
RefSeq:NP_001163693.1 UniGene:Dm.25576 SMR:C6SUV4
EnsemblMetazoa:FBtr0302319 GeneID:42715 KEGG:dme:Dmel_CG34375
FlyBase:FBgn0085404 GeneTree:ENSGT00530000065219 GenomeRNAi:42715
NextBio:830198 Uniprot:C6SUV4
Length = 568
Score = 150 (57.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 53 LASLFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLG-NIRNLAMEKVAGT 111
++ L ECPVC + + PP QC +GH++C+NCR + CP CR PLG R L +K+
Sbjct: 124 ISQLLECPVCLEVIKPPGWQCCNGHVLCNNCRSRSVKCPVCRVPLGPRGRCLLSDKLFTL 183
Query: 112 MW--FPC 116
+ FPC
Sbjct: 184 LAESFPC 190
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 192 GAVDWVMMQSCFGHHFMLVLEKQEKFDGHQH 222
G +W +++ G H + VL+ F H
Sbjct: 431 GRREWQLLRHLSGDHRLAVLQIYGTFGERLH 461
>RGD|2318728 [details] [associations]
symbol:Cyhr1 "cysteine/histidine-rich 1" species:10116 "Rattus
norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184
RGD:2318728 GO:GO:0005737 GO:GO:0005635 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
IPI:IPI00561879 Ensembl:ENSRNOT00000050589 ArrayExpress:D3ZSF8
Uniprot:D3ZSF8
Length = 373
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 36/126 (28%), Positives = 55/126 (43%)
Query: 53 LASLFECPVCFDYVLPPIIQCQSGHLVCSNC----------RPKLSCCPTCRGPLGN--- 99
L S+ C VC D + QC +GHL+C+ C + + + CP CR +
Sbjct: 100 LYSVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLC 159
Query: 100 IRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGAL 159
RNLA+EK + C + + SLL E+ + E+ C+ R C C W G
Sbjct: 160 CRNLAVEKAVSELPSECGFCLRQFPRSLL--ERHQKEE-CQDRVTQCKYKRIGCPWHGPF 216
Query: 160 DQVMAH 165
++ H
Sbjct: 217 HELTVH 222
>ZFIN|ZDB-GENE-060929-720 [details] [associations]
symbol:zgc:153061 "zgc:153061" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008974 PROSITE:PS50089
SMART:SM00184 ZFIN:ZDB-GENE-060929-720 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
GeneTree:ENSGT00390000018258 EMBL:CU207343 IPI:IPI00803356
Ensembl:ENSDART00000086659 ArrayExpress:F1R433 Bgee:F1R433
Uniprot:F1R433
Length = 382
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 39/139 (28%), Positives = 58/139 (41%)
Query: 53 LASLFECPVCFDYVLPPIIQCQSGHLVCSNC----------RPKLSCCPTCRGPLGN--- 99
L S+ C VC D + QC +GHL+C+ C + + + CP CR +
Sbjct: 83 LYSVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEISKSLC 142
Query: 100 IRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGAL 159
RNLA+EK + C Y + S L + E C+ R C C W G
Sbjct: 143 CRNLAVEKAVSELPSECSYCLKQFPRSGLDRHQTEE---CQDRVTQCKYKRIGCPWQGPF 199
Query: 160 DQVMAHLNQS-HKSITTLQ 177
++ AH + H S T ++
Sbjct: 200 HELSAHEAECCHPSKTGME 218
>UNIPROTKB|E9PJD7 [details] [associations]
symbol:CYHR1 "Cysteine and histidine-rich protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SUPFAM:SSF49599 OMA:RIGCPWQ HGNC:HGNC:17806 EMBL:AC084125
IPI:IPI01011177 ProteinModelPortal:E9PJD7 SMR:E9PJD7
Ensembl:ENST00000530374 ArrayExpress:E9PJD7 Bgee:E9PJD7
Uniprot:E9PJD7
Length = 404
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 36/126 (28%), Positives = 55/126 (43%)
Query: 53 LASLFECPVCFDYVLPPIIQCQSGHLVCSNC----------RPKLSCCPTCRGPLGN--- 99
L S+ C VC D + QC +GHL+C+ C + + + CP CR +
Sbjct: 105 LYSVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLC 164
Query: 100 IRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGAL 159
RNLA+EK + C + + SLL E+ + E+ C+ R C C W G
Sbjct: 165 CRNLAVEKAVSELPSECGFCLRQFPRSLL--ERHQKEE-CQDRVTQCKYKRIGCPWHGPF 221
Query: 160 DQVMAH 165
++ H
Sbjct: 222 HELTVH 227
>UNIPROTKB|E2R758 [details] [associations]
symbol:CYHR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR008974
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
GeneTree:ENSGT00390000018258 OMA:RIGCPWQ EMBL:AAEX03008971
EMBL:AAEX03008972 Ensembl:ENSCAFT00000038984 Uniprot:E2R758
Length = 406
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 36/126 (28%), Positives = 55/126 (43%)
Query: 53 LASLFECPVCFDYVLPPIIQCQSGHLVCSNC----------RPKLSCCPTCRGPLGN--- 99
L S+ C VC D + QC +GHL+C+ C + + + CP CR +
Sbjct: 107 LYSVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLC 166
Query: 100 IRNLAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGAL 159
RNLA+EK + C + + SLL E+ + E+ C+ R C C W G
Sbjct: 167 CRNLAVEKAVSELPSECGFCLRQFPRSLL--ERHQKEE-CQDRVTQCKYKRIGCPWHGPF 223
Query: 160 DQVMAH 165
++ H
Sbjct: 224 HELTVH 229
>FB|FBgn0039038 [details] [associations]
symbol:CG6688 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 InterPro:IPR004162 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00228 EMBL:AE014297 GO:GO:0007275
GO:GO:0005634 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 SUPFAM:SSF50156 PANTHER:PTHR10315 eggNOG:NOG246926
GeneTree:ENSGT00530000065219 EMBL:BT088883 RefSeq:NP_651110.1
UniGene:Dm.27380 SMR:Q9VCS4 IntAct:Q9VCS4 MINT:MINT-1564183
EnsemblMetazoa:FBtr0084343 GeneID:42716 KEGG:dme:Dmel_CG6688
UCSC:CG6688-RA FlyBase:FBgn0039038 InParanoid:Q9VCS4 OMA:FEMCRSE
OrthoDB:EOG4S4MZ7 GenomeRNAi:42716 NextBio:830203 Uniprot:Q9VCS4
Length = 424
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 56 LFECPVCFDYVLPPIIQCQSGHLVCSNCRPKLSCCPTCRGPLGNIRNLAMEKV 108
L ECPVC + PP +QCQ+GHL+C +CR + CP CR R L E++
Sbjct: 141 LVECPVCGVTISPPAMQCQNGHLLCVDCRIRSERCPVCRDFYTPRRALLAEQI 193
>UNIPROTKB|Q2TBT8 [details] [associations]
symbol:RNF151 "RING finger protein 151" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS51081
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:BC109671
IPI:IPI00695483 RefSeq:NP_001070506.1 UniGene:Bt.54154
ProteinModelPortal:Q2TBT8 PRIDE:Q2TBT8 Ensembl:ENSBTAT00000047302
GeneID:767973 KEGG:bta:767973 CTD:146310 eggNOG:NOG319521
GeneTree:ENSGT00530000063647 HOGENOM:HOG000154154
HOVERGEN:HBG087956 InParanoid:Q2TBT8 OMA:PCCRKEV OrthoDB:EOG4V6ZHF
NextBio:20918328 Uniprot:Q2TBT8
Length = 240
Score = 112 (44.5 bits), Expect = 0.00035, P = 0.00035
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 57 FECPVCFDYVLPPI-IQCQSGHLVCSNC----RPKLSCCPTCRGPLGNIRNL---AMEKV 108
F C VC + P+ + C H+ C C + CP CR + + + + ++K+
Sbjct: 18 FLCSVCHGVLKRPVRLPCS--HIFCKKCILRWLARQKTCPCCRKEVRHRKMVHVNKLQKI 75
Query: 109 AGTMWFPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWG-GALDQ 161
G + CR GC ++ + H+D+C +CP G + GALD+
Sbjct: 76 IGRLEVKCRNAEAGCQVTCPLAHRKGHQDSCPFELMVCPNEGCMLRVPRGALDE 129
>UNIPROTKB|Q6J211 [details] [associations]
symbol:RNF114 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 GeneTree:ENSGT00530000063064
HOVERGEN:HBG074331 OMA:IEHIQRR EMBL:AADN02018900 EMBL:AY604724
IPI:IPI00571552 UniGene:Gga.20085 Ensembl:ENSGALT00000013014
InParanoid:Q6J211 Uniprot:Q6J211
Length = 225
Score = 111 (44.1 bits), Expect = 0.00038, P = 0.00038
Identities = 30/102 (29%), Positives = 49/102 (48%)
Query: 52 DLASLFECPVCFDYVLPPI-IQCQSGHLVCSNC-----RPKLSCCPTCRGPL-GNIRNLA 104
DL S CPVC + P+ + C GH+ C+ C +PK C CRG L R L
Sbjct: 19 DLLSRLTCPVCLEVFESPVRVPC--GHVFCTPCLQECLKPKKPVCGVCRGVLTAGSRALD 76
Query: 105 MEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTC-EHRPYL 145
+E++ + C +GCG + ++ H +C +++ Y+
Sbjct: 77 LEQLIESTETAC----SGCGKKMFLSKMRSHAASCSKYQNYI 114
>MGI|MGI:1859320 [details] [associations]
symbol:Cyhr1 "cysteine and histidine rich 1" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR008974 PROSITE:PS50089 PROSITE:PS50145 MGI:MGI:1859320
Prosite:PS00518 GO:GO:0005737 GO:GO:0005635 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SUPFAM:SSF49599 CTD:50626 eggNOG:NOG247616
GeneTree:ENSGT00390000018258 HOGENOM:HOG000006931
HOVERGEN:HBG071683 OMA:RIGCPWQ OrthoDB:EOG4BCDN6 EMBL:AJ251516
EMBL:AK129156 EMBL:AK004009 EMBL:BC016196 EMBL:BC025112
EMBL:BC062184 EMBL:BC082772 IPI:IPI00133067 IPI:IPI00134776
IPI:IPI00459724 IPI:IPI00889809 RefSeq:NP_062269.1
RefSeq:NP_851293.1 UniGene:Mm.247752 ProteinModelPortal:Q9QXA1
SMR:Q9QXA1 PaxDb:Q9QXA1 PRIDE:Q9QXA1 Ensembl:ENSMUST00000066677
Ensembl:ENSMUST00000081291 Ensembl:ENSMUST00000177359 GeneID:54151
KEGG:mmu:54151 UCSC:uc007wlf.1 UCSC:uc007wlg.1 UCSC:uc007wlh.1
UCSC:uc007wli.1 ChiTaRS:CYHR1 NextBio:310973 Bgee:Q9QXA1
Genevestigator:Q9QXA1 Uniprot:Q9QXA1
Length = 311
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 71 IQCQSGHLVCSNC----------RPKLSCCPTCRGPLGN---IRNLAMEKVAGTMWFPCR 117
+QC +GHL+C+ C + + + CP CR + RNLA+EK + C
Sbjct: 30 VQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECG 89
Query: 118 YQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAH 165
+ + SLL E+ + E+ C+ R C C W G ++ H
Sbjct: 90 FCLRQFPRSLL--ERHQKEE-CQDRVTQCKYKRIGCPWHGPFHELTVH 134
>RGD|1561328 [details] [associations]
symbol:RGD1561328 "cysteine and histidine rich 1-like"
species:10116 "Rattus norvegicus" [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR001293 InterPro:IPR008974 PROSITE:PS50089
PROSITE:PS50145 RGD:1561328 Prosite:PS00518 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SUPFAM:SSF49599 eggNOG:NOG247616 GeneTree:ENSGT00390000018258
HOGENOM:HOG000006931 HOVERGEN:HBG071683 OMA:RIGCPWQ
OrthoDB:EOG4BCDN6 EMBL:AABR03057027 EMBL:BC091178 IPI:IPI00204307
IPI:IPI00361154 RefSeq:NP_001020293.2 UniGene:Rn.141005
UniGene:Rn.231909 ProteinModelPortal:Q5BK76 PhosphoSite:Q5BK76
Ensembl:ENSRNOT00000019853 GeneID:315097 KEGG:rno:315097
UCSC:RGD:1561328 CTD:315097 NextBio:668658 ArrayExpress:Q5BK76
Genevestigator:Q5BK76 Uniprot:Q5BK76
Length = 311
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 71 IQCQSGHLVCSNC----------RPKLSCCPTCRGPLGN---IRNLAMEKVAGTMWFPCR 117
+QC +GHL+C+ C + + + CP CR + RNLA+EK + C
Sbjct: 30 VQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECG 89
Query: 118 YQMNGCGISLLHTEKPEHEDTCEHRPYLCPCPGASCKWGGALDQVMAH 165
+ + SLL E+ + E+ C+ R C C W G ++ H
Sbjct: 90 FCLRQFPRSLL--ERHQKEE-CQDRVTQCKYKRIGCPWHGPFHELTVH 134
>DICTYBASE|DDB_G0347550 [details] [associations]
symbol:DDB_G0347550 species:44689 "Dictyostelium
discoideum" [GO:0055114 "oxidation-reduction process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004601 "peroxidase activity" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR000326
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR016119
PROSITE:PS50145 dictyBase:DDB_G0347550 InterPro:IPR016118
GO:GO:0016020 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004601 GO:GO:0004842 Gene3D:1.20.144.10
SUPFAM:SSF48317 SUPFAM:SSF49599 Gene3D:3.90.890.10
EMBL:AAFI02000171 Gene3D:1.10.606.10 RefSeq:XP_635516.1
ProteinModelPortal:Q54FF5 EnsemblProtists:DDB0189138 GeneID:8627883
KEGG:ddi:DDB_G0290889 eggNOG:NOG28258 Uniprot:Q54FF5
Length = 1130
Score = 119 (46.9 bits), Expect = 0.00065, P = 0.00065
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 52 DLASLFECPVCFDYVLPPIIQCQSGHLVCSN-CRPKL------SCCPTCRGPLGNIRNLA 104
D ++F C +C + P+ QC++GHL+C C K+ CP CR + ++ L
Sbjct: 577 DSLTIFTCSICTSLMSNPL-QCKNGHLICDKPCWSKILEGSFVKSCPICR-VIVSLDQLG 634
Query: 105 MEKVAGTMW----FPCRYQMNGCGISLLHTEKPEHEDTCEHRPYLC 146
++ M+ F C Y+ NGC +++ H + C+++ C
Sbjct: 635 KNQIYNDMFSKLKFNCFYKPNGCNEINNYSKLKNHFEICKYKSVKC 680
>MGI|MGI:1933159 [details] [associations]
symbol:Rnf114 "ring finger protein 114" species:10090 "Mus
musculus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 MGI:MGI:1933159
Prosite:PS00518 Pfam:PF05605 GO:GO:0007275 GO:GO:0030154
GO:GO:0046872 GO:GO:0008270 GO:GO:0007283 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OMA:IEHIQRR OrthoDB:EOG4CVG7Q
ChiTaRS:RNF114 EMBL:AF282919 EMBL:AF502145 EMBL:AK088441
EMBL:AK139030 EMBL:AK148290 EMBL:AK148392 EMBL:AK150086
EMBL:AK150263 EMBL:AK152687 EMBL:AK153452 EMBL:AK159818
EMBL:BC054416 EMBL:BC085146 IPI:IPI00113520 RefSeq:NP_109668.2
UniGene:Mm.22225 ProteinModelPortal:Q9ET26 SMR:Q9ET26 STRING:Q9ET26
PhosphoSite:Q9ET26 REPRODUCTION-2DPAGE:Q9ET26 PaxDb:Q9ET26
PRIDE:Q9ET26 Ensembl:ENSMUST00000078050 Ensembl:ENSMUST00000109214
GeneID:81018 KEGG:mmu:81018 InParanoid:Q9ET26 NextBio:350386
Bgee:Q9ET26 Genevestigator:Q9ET26 GermOnline:ENSMUSG00000006418
Uniprot:Q9ET26
Length = 229
Score = 109 (43.4 bits), Expect = 0.00070, P = 0.00070
Identities = 29/104 (27%), Positives = 50/104 (48%)
Query: 49 TSTDLASLFECPVCFDYVLPPIIQCQSGHLVCSNC-----RPKLSCCPTCRGPLG-NIRN 102
+ TD S F CPVC + P+ Q GH+ CS C +PK C CR L +R
Sbjct: 20 SETDPLSRFTCPVCLEVFEKPV-QVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRA 78
Query: 103 LAMEKVAGTMWFPCRYQMNGCGISLLHTEKPEHEDTC-EHRPYL 145
+ +E+ ++ C +GC + + ++ H +C +++ Y+
Sbjct: 79 VELERQIESIETSC----HGCRKNFILSKIRAHVTSCSKYQNYI 118
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.452 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 300 286 0.00086 115 3 11 22 0.47 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 621 (66 KB)
Total size of DFA: 246 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.04u 0.10s 24.14t Elapsed: 00:00:02
Total cpu time: 24.05u 0.10s 24.15t Elapsed: 00:00:02
Start: Thu Aug 15 16:32:27 2013 End: Thu Aug 15 16:32:29 2013