BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1228
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus GN=PBRM1 PE=1 SV=1
Length = 1633
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Query: 83 KRRLYTLCKCLMDYRDQ-DGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEK 141
K+R+ L +++ R+ GR+ +FM PS K YP+YYK+I +P+D+ IE NI+N+K
Sbjct: 518 KQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDK 577
Query: 142 YRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAELGPLPSGED 195
Y ++ ++ D +LMF N R +NE GS +Y DA LEK+L E+ ELGPLP +D
Sbjct: 578 YVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDD 631
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 81/131 (61%), Gaps = 2/131 (1%)
Query: 57 ARQKVASTSKSPRALTRGKYLDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKI 116
A K+ + KS + + KY+ P++++L + + + +Y D+ GR+ +F+ LPS
Sbjct: 633 ASPKLKLSRKSGISPKKSKYM--TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSE 690
Query: 117 YPEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNL 176
P+YY IK+P+DM +I S++ KY+ D ++ DF +MF N +NEP SLIY+DA+ L
Sbjct: 691 LPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVL 750
Query: 177 EKVLLERVAEL 187
KVLLE E+
Sbjct: 751 HKVLLETRREI 761
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 60/103 (58%)
Query: 86 LYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQ 145
LY L + R+ G+ F +LPS K YP+YY+ IK PI + QI + ++N +Y +
Sbjct: 384 LYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETL 443
Query: 146 DEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAELG 188
D++ +D LMF N + +N P S IY+ + +++V+ + EL
Sbjct: 444 DQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELA 486
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%)
Query: 82 LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEK 141
LK L L + + + GR +F +LPS YP+YY +IK+PID+ I IQN
Sbjct: 179 LKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGT 238
Query: 142 YRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAEL 187
Y+S + D L+ N + +NEPGS +++DA ++K+ + AE+
Sbjct: 239 YKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEI 284
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 87 YTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQD 146
+ L + DY+D+ GR +F+ P + P+YY+V+ QPID+ +I+ ++ E+Y +
Sbjct: 52 HELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVN 111
Query: 147 EILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLL 181
+ +DF+L+F N + + +P S Y+ A L ++ L
Sbjct: 112 VLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYL 146
Score = 38.5 bits (88), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 86 LYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQ 145
++ L +M ++D +GR E+P+ + P + K P+ I N++N +YR
Sbjct: 780 IHNLFVSVMSHQDDEGRCYSDSLAEIPA--VDPNFPN--KPPLTFDIIRKNVENNRYRRL 835
Query: 146 DEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAEL 187
D + + R N S IYEDAV L++ ++ EL
Sbjct: 836 DLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDEL 877
>sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1 SV=1
Length = 1689
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 83 KRRLYTLCKCLMDYRDQ-DGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEK 141
K+R+ L +++ R+ GR+ +FM PS K YP+YYK+I +P+D+ IE NI+N+K
Sbjct: 520 KQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
Query: 142 YRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAELGPLPSGEDF 196
Y ++ ++ D +LMF N R +NE GS +Y DA LEK+L E+ ELGPLP +D
Sbjct: 580 YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDM 634
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 10/157 (6%)
Query: 26 YIFKVLDREGRNQYDEESDSDEEQEGARVVRARQKVASTSKSPRALTRGKYLDNKPLKRR 85
+I + L +E R + D D+ A K+ + KS + + KY+ P++++
Sbjct: 612 HILEKLLKEKRKELGPLPDDDD--------MASPKLKLSRKSGISPKKSKYM--TPMQQK 661
Query: 86 LYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQ 145
L + + + +Y D+ GR+ +F+ LPS P+YY IK+P+DM +I S++ KY+
Sbjct: 662 LNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDI 721
Query: 146 DEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLE 182
D ++ DF +MF N +NEP SLIY+DA+ L KVLLE
Sbjct: 722 DSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLE 758
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%)
Query: 82 LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEK 141
LK L L + ++ + GR +F +LPS YP+YY +IK+PID+ I IQN
Sbjct: 182 LKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGS 241
Query: 142 YRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAEL 187
Y+S + D L+ N + +NEPGS +++DA +++K+ + AE+
Sbjct: 242 YKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEI 287
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 38 QYDEESDSDEEQEGARVVRARQKVASTSKSPRALTRGKYLDNKPLKRRLYTLCKCLMDYR 97
QY ES+ D AR + S + ++D + Y L + R
Sbjct: 350 QYGSESEEDAALAAARYEEGESEAESITS---------FMD---VSNPFYQLYDTVRSCR 397
Query: 98 DQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFG 157
+ G+ F LPS K YP+YY+ IK PI + QI + ++N++Y + D + D LMF
Sbjct: 398 NNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFE 457
Query: 158 NCREFNEPGSLIYEDAVNLEKVLLERVAELG 188
N + +N P S IY+ + L++V+ + EL
Sbjct: 458 NAKRYNVPNSAIYKRVLKLQQVMQAKKKELA 488
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 56/95 (58%)
Query: 87 YTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQD 146
+ L + DY+D+ GR +F+ P + P+YY+V+ QPID+ +I+ ++ E+Y +
Sbjct: 51 HELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVN 110
Query: 147 EILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLL 181
+ +DF+L+F N + + +P S Y+ A L + L
Sbjct: 111 LLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYL 145
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 86 LYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQ 145
++ L +M ++D +GR E+P+ + P + K P+ I N++N +YR
Sbjct: 782 IHNLFVSVMSHQDDEGRCYSDSLAEIPA--VDPNFPN--KPPLTFDIIRKNVENNRYRRL 837
Query: 146 DEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAEL 187
D + R N S IYEDAV L++ ++ EL
Sbjct: 838 DLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDEL 879
>sp|Q8BSQ9|PB1_MOUSE Protein polybromo-1 OS=Mus musculus GN=Pbrm1 PE=1 SV=4
Length = 1634
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 83 KRRLYTLCKCLMDYRDQ-DGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEK 141
K+R+ L +++ R+ GR+ +FM PS K YP+YYK+I +P+D+ IE NI+N+K
Sbjct: 520 KQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
Query: 142 YRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAELGPLPSGEDF 196
Y ++ ++ D +LMF N R +NE GS +Y DA LEK+L ++ ELGPLP +D
Sbjct: 580 YAGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELGPLPDDDDM 634
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Query: 57 ARQKVASTSKSPRALTRGKYLDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKI 116
A K+ + KS + + KY+ P++++L + + + +Y D+ GR+ +F+ LPS
Sbjct: 635 ASPKLKLSRKSGVSPKKSKYM--TPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSE 692
Query: 117 YPEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNL 176
P+YY IK+P+DM +I S++ KY+ D ++ DF +MF N +NEP SLIY+DA+ L
Sbjct: 693 LPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVL 752
Query: 177 EKVLLE 182
KVLLE
Sbjct: 753 HKVLLE 758
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%)
Query: 82 LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEK 141
LK L L + ++ + GR +F +LPS YP+YY +IK+PID+ I IQN
Sbjct: 182 LKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGS 241
Query: 142 YRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAEL 187
Y+S + D L+ N + +NEPGS +++DA +++K+ + AE+
Sbjct: 242 YKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEI 287
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 38 QYDEESDSDEEQEGARVVRARQKVASTSKSPRALTRGKYLDNKPLKRRLYTLCKCLMDYR 97
QY ES+ D AR + S + ++D +LY + +++
Sbjct: 350 QYGSESEEDAALAAARYEEGESEAESITS---------FMDVSNPFHQLYDTVRSCRNHQ 400
Query: 98 DQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFG 157
Q +P F LPS K YP+YY+ IK PI + QI + ++N++Y + D + D LMF
Sbjct: 401 GQLIAEP---FFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFE 457
Query: 158 NCREFNEPGSLIYEDAVNLEKVLLERVAELG 188
N + +N P S IY+ + L++V+ + EL
Sbjct: 458 NAKRYNVPNSAIYKRVLKLQQVMQAKKKELA 488
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 56/95 (58%)
Query: 87 YTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQD 146
+ L + DY+D+ GR +F+ P + P+YY+V+ QPID+ +I+ ++ E+Y +
Sbjct: 51 HELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVN 110
Query: 147 EILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLL 181
+ +DF+L+F N + + +P S Y+ A L + L
Sbjct: 111 LLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYL 145
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 86 LYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQ 145
++ L +M ++D +GR E+P+ + K P+ I N+++ +YR
Sbjct: 782 IHNLFVSVMSHQDDEGRCYSDSLAEIPAV----DPNSPNKPPLTFDIIRKNVESNRYRRL 837
Query: 146 DEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAEL 187
D + R N S IYEDAV L++ + EL
Sbjct: 838 DLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIRIRDEL 879
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 28/170 (16%)
Query: 38 QYDEESDSDEEQEGARVVRARQK--VASTSKSPRALTRGKYLDNKPLKRR---------- 85
Q+ E D + E AR R R K +AS ++P ALT L+ KP K+R
Sbjct: 1010 QWMAEMDMESE---ARPTRGRPKRNIASVDETP-ALT----LNGKPKKKRGPAPDTLTSE 1061
Query: 86 ----LYTLC----KCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNI 137
L +C K + + D +GR +F+ELPS K+YP+YY +IK PI + I +I
Sbjct: 1062 HRSLLRRVCLEIYKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHI 1121
Query: 138 QNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAEL 187
Y++ + + SD MF N R +NE GS +YEDA ++ + ++ EL
Sbjct: 1122 NGTFYKTLEAMKSDLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIEEL 1171
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 12/136 (8%)
Query: 44 DSDEEQEGARVVRARQKVASTSKSPRALTRGKYLDNKPLKRRLYTLCKCLMDYRDQDGRQ 103
D DEE + + R R S +P LT+ ++ + ++ Y+D GRQ
Sbjct: 1399 DKDEESKKQKK-RGRPPAEKLSPNPPNLTK-----------KMKKIVDAVIKYKDSSGRQ 1446
Query: 104 PMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFN 163
+F++LPS K PEYY++I++P+D +I+ I+N KYRS +++ D L+ N + FN
Sbjct: 1447 LSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFN 1506
Query: 164 EPGSLIYEDAVNLEKV 179
GSLIYED++ L+ V
Sbjct: 1507 LEGSLIYEDSIVLQSV 1522
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 12/136 (8%)
Query: 44 DSDEEQEGARVVRARQKVASTSKSPRALTRGKYLDNKPLKRRLYTLCKCLMDYRDQDGRQ 103
D DEE + + R R S +P LT+ ++ + ++ Y+D GRQ
Sbjct: 1399 DKDEESKKQKK-RGRPPAEKLSPNPPNLTK-----------KMKKIVDAVIKYKDSSGRQ 1446
Query: 104 PMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFN 163
+F++LPS K PEYY++I++P+D +I+ I+N KYRS +++ D L+ N + FN
Sbjct: 1447 LSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFN 1506
Query: 164 EPGSLIYEDAVNLEKV 179
GSLIYED++ L+ V
Sbjct: 1507 LEGSLIYEDSIVLQSV 1522
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 70/108 (64%)
Query: 80 KPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQN 139
K L+R + + L + + +DGR +F+ P+ K+YP+YY +IK+PI + +I+ NI+N
Sbjct: 1516 KALRRYCMEIFERLYNLQSEDGRFVNGLFLYPPNRKLYPDYYIIIKRPIALGKIKRNIKN 1575
Query: 140 EKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAEL 187
++Y E+++DF LMF N +NE S++YEDA +EK L E + +L
Sbjct: 1576 DRYGDVGELIADFMLMFNNAYTYNEEHSIVYEDAKLMEKTLKEVIEDL 1623
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Query: 47 EEQEGARVVRARQKVASTSKSPRALTRGKYLDNKPLKRRLYTLCKCLMDYRDQDGRQPML 106
E+ E A+ R R S +P LT+ ++ + +++Y+D GRQ
Sbjct: 1364 EDVEKAKKRRGRPPAEKLSPNPPKLTK-----------QMNAIIDTVINYKDSSGRQLSE 1412
Query: 107 MFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPG 166
+F++LPS K PEYY++I++P+D +I+ I+N KYRS ++ D L+ N + FN G
Sbjct: 1413 VFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEG 1472
Query: 167 SLIYEDAVNLEKV 179
S IYED++ L+ V
Sbjct: 1473 SQIYEDSIVLQSV 1485
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 66 KSPRALTRGKYLDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIK 125
++P A T + K K+ L L ++Y ++ GR+ +F+ PS +YP+YY +IK
Sbjct: 1535 RTPAAATSPIDIREKVAKQAL-DLYHFALNYENEAGRKLSDIFLSKPSKALYPDYYMIIK 1593
Query: 126 QPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVA 185
P+ I ++I+ Y S E L DF L+F N R +N GS++YED++ LEKV+ ++
Sbjct: 1594 YPVAFDNINTHIETLAYNSLKETLQDFHLIFSNARIYNTEGSVVYEDSLELEKVVTKKYC 1653
Query: 186 ELGPLPSGEDF 196
E+ S DF
Sbjct: 1654 EIMGDNSQLDF 1664
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 79 NKP-LKRRLYTLCKCLMDYRDQD-GRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESN 136
N P L +++ + ++ Y+D GRQ +F++LPS K PEYY++I++P+D +I+
Sbjct: 1413 NPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKER 1472
Query: 137 IQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKV 179
I+N KYRS +++ D L+ N + FN GSLIYED++ L+ V
Sbjct: 1473 IRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSV 1515
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 79 NKP-LKRRLYTLCKCLMDYRDQD-GRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESN 136
N P L +++ + ++ Y+D GRQ +F++LPS K PEYY++I++P+D +I+
Sbjct: 1454 NPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKER 1513
Query: 137 IQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKV 179
I+N KYRS +++ D L+ N + FN GSLIYED++ L+ V
Sbjct: 1514 IRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSV 1556
>sp|O74964|RSC1_SCHPO Chromatin structure-remodeling complex subunit rsc1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rsc1 PE=1 SV=1
Length = 803
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%)
Query: 82 LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEK 141
L+ R + + + YRD GRQ F LP +++PEYY+ I+QP+ + I+ + +
Sbjct: 211 LEARAKVIMRQVRRYRDGSGRQLFAPFERLPDPRMFPEYYQAIEQPMALEVIQKKLSKHR 270
Query: 142 YRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLE 182
Y + ++ + DF LMF N + FN+P S +Y DA L+ L +
Sbjct: 271 YETIEQFVDDFNLMFDNAKSFNDPSSQVYRDADFLKNYLAD 311
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 29/153 (18%)
Query: 45 SDEEQEGARVVRARQKVASTSKSPRALTRGKYLDNKPLKRRLYTLCKCLMDYRDQ----- 99
+ E+ E A+ R R S +P LT+ ++ + +++Y+D+
Sbjct: 1357 AKEDVEKAKKRRGRPPAEKLSPNPPKLTK-----------QMNAIIDTVINYKDRCNVEK 1405
Query: 100 -------------DGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQD 146
GRQ +F++LPS K PEYY++I++P+D +I+ I+N KYRS
Sbjct: 1406 VPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLG 1465
Query: 147 EILSDFRLMFGNCREFNEPGSLIYEDAVNLEKV 179
++ D L+ N + FN GS IYED++ L+ V
Sbjct: 1466 DLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSV 1498
>sp|Q09948|RSC4_SCHPO Chromatin structure-remodeling complex subunit rsc4
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rsc4 PE=1 SV=1
Length = 542
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 56/92 (60%)
Query: 82 LKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEK 141
+ + + + L + +D+ GR + +F++LPS ++YP+YY++IK P+ + +E + +
Sbjct: 144 VPKVIQNILDALHEEKDEQGRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKMLEKRFKKGE 203
Query: 142 YRSQDEILSDFRLMFGNCREFNEPGSLIYEDA 173
Y + + + D MF N + +N PGS +YEDA
Sbjct: 204 YTTLESFVKDLNQMFINAKTYNAPGSFVYEDA 235
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 79 NKPL-KRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNI 137
N P K + + + L+ +D +G +F ELPS + +P+YY++I++PI + +
Sbjct: 7 NAPFDKTKFDEVLEALVGLKDNEGNPFDDIFEELPSKRYFPDYYQIIQKPICYKMMRNKA 66
Query: 138 QNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAV 174
+ KY S + D RLM N + +N PGSL+YE +V
Sbjct: 67 KTGKYLSMGDFYDDIRLMVSNAQTYNMPGSLVYECSV 103
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 73 RGKYLDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQ 132
R + LD + K++++ + ++ + +QDGR FM+LPS + P+YY++IK+P+D+ +
Sbjct: 1418 RRQNLDKRS-KKQMHKIMSAVIKH-NQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKK 1475
Query: 133 IESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLL 181
I I++ KY +E+ DF + N + +NE SLIY D++ L+KV +
Sbjct: 1476 ILQRIEDCKYADLNELEKDFMQLCQNAQIYNEEASLIYLDSIALQKVFV 1524
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+Y+K+IKQP+DM I+ ++N Y S E + DF MF NC +N+PG + A LE
Sbjct: 71 PDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLE 130
Query: 178 KVLLERVAEL 187
KV L+++ +
Sbjct: 131 KVFLQKIESM 140
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y+ +IK+P+D+ ++ + N +Y+S E +D RL+F NC ++N P + L+
Sbjct: 516 DYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQD 575
Query: 179 VLLERVAELGPLP 191
V R A + P
Sbjct: 576 VFEMRYANIPDEP 588
>sp|Q6BGW1|GCN5_DEBHA Histone acetyltransferase GCN5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GCN5 PE=3 SV=2
Length = 455
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+YY VIK+P+D+ +ES ++N+KY S D+ L D RL+F NCR +N + +++A LEK
Sbjct: 378 DYYDVIKEPMDLSTMESKLENDKYDSFDQFLYDARLIFNNCRSYNADSTTYFKNATKLEK 437
Query: 179 VLLERVAE 186
+ ++ +
Sbjct: 438 FMNNKIKD 445
>sp|Q8WZM0|GCN5_YARLI Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GCN5 PE=3 SV=1
Length = 464
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 48/70 (68%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YY+VIK+P+D+ +E ++ + Y++ +E + D RL+F NCR +N + Y++A LE
Sbjct: 387 PDYYEVIKEPMDLSTMEQRLEADSYKTMEEFVYDARLVFNNCRAYNNETTTYYKNANKLE 446
Query: 178 KVLLERVAEL 187
K ++ ++ E+
Sbjct: 447 KFMVAKIKEI 456
>sp|Q6MGA9|BRD2_RAT Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2
SV=1
Length = 798
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+Y+K+IKQP+DM I+ ++N Y + E + DF MF NC +N+P I A LE
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 178 KVLLERVAEL 187
K+ L++VA +
Sbjct: 170 KIFLQKVASM 179
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y+ +IK P+D+ ++ ++N YR E +D RLMF NC ++N P + A L+
Sbjct: 384 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 443
Query: 179 VLLERVAEL-------GPLP 191
V R A++ GPLP
Sbjct: 444 VFEFRYAKMPDEPLEPGPLP 463
>sp|Q7JJ13|BRD2_MOUSE Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1
Length = 798
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+Y+K+IKQP+DM I+ ++N Y + E + DF MF NC +N+P I A LE
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 178 KVLLERVAEL 187
K+ L++VA +
Sbjct: 170 KIFLQKVASM 179
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y+ +IK P+D+ ++ ++N YR E +D RLMF NC ++N P + A L+
Sbjct: 384 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 443
Query: 179 VLLERVAEL-------GPLP 191
V R A++ GPLP
Sbjct: 444 VFEFRYAKMPDEPLEPGPLP 463
>sp|Q32S26|BRD2_BOVIN Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1
Length = 803
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+Y+K+IKQP+DM I+ ++N Y + E + DF MF NC +N+P I A LE
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 178 KVLLERVAEL 187
K+ L++VA +
Sbjct: 171 KIFLQKVASM 180
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y+ +IK P+D+ ++ ++N YR E +D RLMF NC ++N P + A L+
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 179 VLLERVAEL-------GPLP 191
V R A++ GPLP
Sbjct: 445 VFEFRYAKMPDEPLEPGPLP 464
>sp|Q5TJG6|BRD2_CANFA Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3
SV=1
Length = 803
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+Y+K+IKQP+DM I+ ++N Y + E + DF MF NC +N+P I A LE
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 178 KVLLERVAEL 187
K+ L++VA +
Sbjct: 171 KIFLQKVASM 180
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y+ +IK P+D+ ++ ++N YR E +D RLMF NC ++N P + A L+
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 179 VLLERVAEL-------GPLP 191
V R A++ GPLP
Sbjct: 445 VFEFRYAKMPDEPLEPGPLP 464
>sp|P25440|BRD2_HUMAN Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2
Length = 801
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+Y+K+IKQP+DM I+ ++N Y + E + DF MF NC +N+P I A LE
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 170
Query: 178 KVLLERVAEL 187
K+ L++VA +
Sbjct: 171 KIFLQKVASM 180
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y+ +IK P+D+ ++ ++N YR E +D RLMF NC ++N P + A L+
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 179 VLLERVAEL-------GPLP 191
V R A++ GPLP
Sbjct: 445 VFEFRYAKMPDEPLEPGPLP 464
>sp|Q9ESU6|BRD4_MOUSE Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1
Length = 1400
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YYK+IK P+DM I+ ++N Y + E + DF MF NC +N+PG I A LE
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 178 KVLLERVAEL 187
K+ L+++ EL
Sbjct: 155 KLFLQKINEL 164
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y +IK P+DM I+S +++ +YR E +D RLMF NC ++N P + A L+
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 449
Query: 179 VLLERVAELGPLP 191
V R A++ P
Sbjct: 450 VFEMRFAKMPDEP 462
>sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2
Length = 1362
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YYK+IK P+DM I+ ++N Y + E + DF MF NC +N+PG I A LE
Sbjct: 95 PDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE 154
Query: 178 KVLLERVAEL 187
K+ L+++ EL
Sbjct: 155 KLFLQKINEL 164
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y +IK P+DM I+S ++ +YR E +D RLMF NC ++N P + A L+
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 179 VLLERVAELGPLP 191
V R A++ P
Sbjct: 449 VFEMRFAKMPDEP 461
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 62.8 bits (151), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 105 MLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNE--KYRSQDEILSDFRLMFGNCREF 162
M + + P P+YYK+IK P+D+ I+ +Q + Y ++ ++DFRL+F NC EF
Sbjct: 921 MSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYCMYTKPEDFVADFRLIFQNCAEF 980
Query: 163 NEPGSLIYEDAVNLEKVLLERVAELGP 189
NEP S + + LE E + L P
Sbjct: 981 NEPDSEVANAGIKLESYFEELLKNLYP 1007
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+Y+K+IK P+DM I+ ++N Y S E + DF MF NC +N+P I A LE
Sbjct: 71 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 130
Query: 178 KVLLERVAE--------LGPLPSGE 194
K+ L++VA+ L P P G+
Sbjct: 131 KIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y+ +IK P+D+ ++ + +Y +D RLMF NC ++N P + A L+
Sbjct: 347 DYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQD 406
Query: 179 VLLERVAEL 187
V R A++
Sbjct: 407 VFEMRFAKM 415
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+Y+K+IK P+DM I+ ++N Y S E + DF MF NC +N+P I A LE
Sbjct: 70 PDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALE 129
Query: 178 KVLLERVAE--------LGPLPSGE 194
K+ L++VA+ L P P G+
Sbjct: 130 KIFLQKVAQMPQEEVELLPPAPKGK 154
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y+ +IK P+D+ ++ + + +Y +D RLMF NC ++N P + A L+
Sbjct: 346 DYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQD 405
Query: 179 VLLERVAELGPLP 191
V R A++ P
Sbjct: 406 VFEMRFAKMPDEP 418
>sp|F1QW93|BRDT_DANRE Bromodomain testis-specific protein OS=Danio rerio GN=brdt PE=2
SV=2
Length = 918
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YY +IK P+D+ I ++N Y E + DF MF NC +N PG I A LE
Sbjct: 66 PDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLE 125
Query: 178 KVLLERVAEL 187
K+ LE+VAE+
Sbjct: 126 KLFLEKVAEM 135
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 119 EYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEK 178
+Y+++I QP+DM I+ ++ +Y + +D RLMF NC ++N PG + A L+
Sbjct: 308 DYHEIIHQPMDMSTIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQD 367
Query: 179 V 179
V
Sbjct: 368 V 368
>sp|Q9UUK2|GCN5_SCHPO Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gcn5 PE=1 SV=1
Length = 454
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 77 LDNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESN 136
L KP + + + + L + + FM+ S + P+YY+VI+ P+D+ +E
Sbjct: 339 LSKKPRPKPFFAVLEML--FTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFR 396
Query: 137 IQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAE 186
++N +Y S +E + D + +F NCR +N+ + Y++A LEK +++ E
Sbjct: 397 LRNNQYESVEEFIRDAKYIFDNCRSYNDSNTTYYKNADRLEKFFQKKLRE 446
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 105 MLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNE--KYRSQDEILSDFRLMFGNCREF 162
M + + P P+YYK+IK P+D+ I+ +Q + Y ++ ++DFRL+F NC EF
Sbjct: 920 MSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEF 979
Query: 163 NEPGSLIYEDAVNLEKVLLERVAELGP 189
NEP S + + LE E + L P
Sbjct: 980 NEPDSEVANAGIKLENYFEELLKNLYP 1006
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 88 TLCKCLMDYRDQ----DGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYR 143
T+ K + + R+Q D +F +LPS + YP+Y+KVI++P+ + I N +N Y+
Sbjct: 1254 TVEKLVEEMREQLDEVDSHPRTSIFEKLPSKRDYPDYFKVIEKPMAIDIILKNCKNGTYK 1313
Query: 144 SQDEILSDFRLMFGNCREFNEPGSLIYEDAVNL 176
+ +E+ + MF N R +NE GS +Y DA L
Sbjct: 1314 TLEEVRQALQTMFENARFYNEEGSWVYVDADKL 1346
>sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1
SV=1
Length = 568
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 78 DNKPLKRRLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNI 137
+ K L + L K + D+ D F E ++ P+YY +IK PID+ I +
Sbjct: 456 NQKQLNALMRALLKTMQDHAD------AWPFKEPVDSRDVPDYYDIIKDPIDLKVIAKRV 509
Query: 138 QNEKYR-SQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERV 184
++E+Y + D ++D R MF NCR +N P ++ Y+ A LE +V
Sbjct: 510 ESEQYYVTLDMFVADARRMFNNCRTYNSPDTIYYKCATRLETHFHSKV 557
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 79 NKPLKRRLYT---LCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIES 135
+K L+++ T + K LM ++ D P L ++ P A P Y+ V+K P+D+ I +
Sbjct: 316 SKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPVD-PIALNLPNYFDVVKNPMDLGTISN 374
Query: 136 NIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVL 180
N+ N KY++ D+ + D L+F NC +FN G+ ++ L+++
Sbjct: 375 NLMNWKYKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELF 419
Score = 54.7 bits (130), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 87 YTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQD 146
Y L R +D R P L ++ P A P Y+ ++ P+D+ IE+ +Q Y S +
Sbjct: 141 YLLSSIKATKRLKDAR-PFLKPVD-PIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVE 198
Query: 147 EILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAELGP 189
++ SDF+ M NC FN P S I A ++K ++++ + P
Sbjct: 199 QVTSDFKTMVDNCLNFNGPESSISSMAKRIQKYFEKKLSAMPP 241
>sp|Q58F21|BRDT_HUMAN Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1
SV=4
Length = 947
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YY +IK P+D+ I+ ++N+ Y E + DF MF NC +N+PG I A LE
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 178 KVLLERVAEL 187
K+ +++++++
Sbjct: 124 KLFMQKLSQM 133
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 120 YYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKV 179
YY V+K P+D+ I+ + N++Y+ + +D RLMF NC ++N P + A L+ V
Sbjct: 309 YYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDV 368
Query: 180 L 180
Sbjct: 369 F 369
>sp|F7DRV9|BRDT_XENTR Bromodomain testis-specific protein OS=Xenopus tropicalis GN=brdt
PE=3 SV=1
Length = 933
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YY++IK P+D+ I ++ Y + + DF MF NC +N+PG I + LE
Sbjct: 65 PDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELE 124
Query: 178 KVLLERVAEL 187
KV +E++AE+
Sbjct: 125 KVFMEKIAEM 134
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 123 VIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKV 179
IK P+D+ I ++N Y+ + SD RLMF N ++N P + + A ++ V
Sbjct: 321 AIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDV 377
>sp|Q4R8Y1|BRDT_MACFA Bromodomain testis-specific protein OS=Macaca fascicularis GN=BRDT
PE=2 SV=3
Length = 947
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YY +IK P+D+ I+ ++N+ Y E + DF MF NC +N+PG I A LE
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 178 KVLLERVAEL 187
K+ +++++++
Sbjct: 124 KLFVQKLSQM 133
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 120 YYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKV 179
YY ++K P+D+ I+ + N++Y+ + +D RLMF NC ++N P + A L+ V
Sbjct: 309 YYDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDV 368
Query: 180 L 180
Sbjct: 369 F 369
>sp|D4A7T3|BRDT_RAT Bromodomain testis-specific protein OS=Rattus norvegicus GN=Brdt
PE=1 SV=1
Length = 952
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YY +I+ P+D+ I+ ++N Y E + DF MF NC +N+PG I A LE
Sbjct: 63 PDYYTIIETPMDLSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALE 122
Query: 178 KVLLERVAEL 187
K+ +++++++
Sbjct: 123 KLFMQKLSQM 132
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 120 YYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKV 179
YY ++K P+D+ I+ + ++Y+ E +D RLMF NC ++N P + A L+ V
Sbjct: 308 YYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDV 367
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 108 FMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGS 167
FME K P+YYKVIK+P+D+ ++E +++ Y E + D +F NCR +N S
Sbjct: 2581 FMEPVDPKEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDMTKIFDNCRYYNPKES 2640
Query: 168 LIYEDAVNLEKVLLERV 184
Y+ A LE ++++
Sbjct: 2641 SFYKCAEALESYFVQKI 2657
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+Y+ VIK+P+D+ I+S + +Y + +E SD LMF NC +N PG+ ++ LE
Sbjct: 291 PDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLE 350
Query: 178 KVLLER 183
V E+
Sbjct: 351 NVFKEK 356
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 30 VLDREGRNQYDEESDSDE-EQEGARV--VRARQKVASTSKSPRALTRGKYLDNKPLKRRL 86
+ +G N +EES S + + GA V ++ +K + K P + P ++
Sbjct: 32 IQSSDGHNDENEESLSRKRDSSGATVGDLKQEEKESMPKKEPEPTVKKIRGSGMPPPQQK 91
Query: 87 YTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQD 146
Y L R ++ P + ++ P + P+Y ++K P+D+ IE + + +Y
Sbjct: 92 YCLAIVRQLKRTKNS-APFKVPVD-PIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQ 149
Query: 147 EILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAEL 187
E + D LMF NC +N S + L++V ++ +L
Sbjct: 150 EFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQL 190
>sp|Q92831|KAT2B_HUMAN Histone acetyltransferase KAT2B OS=Homo sapiens GN=KAT2B PE=1 SV=3
Length = 832
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 85 RLYTLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRS 144
+LY+ K ++ + Q FME P YY+VI+ P+D+ + ++N Y S
Sbjct: 727 QLYSTLKSIL--QQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVS 784
Query: 145 QDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAELG 188
+ ++D + +F NC+E+N P S Y+ A LEK ++ E G
Sbjct: 785 KKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG 828
>sp|Q9JHD1|KAT2B_MOUSE Histone acetyltransferase KAT2B OS=Mus musculus GN=Kat2b PE=1 SV=2
Length = 813
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 88 TLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQDE 147
TL L ++ P FME P YY+VI+ P+D+ + ++N Y S+
Sbjct: 712 TLKNILQQVKNHPNAWP---FMEPVKRTEAPGYYEVIRFPMDLKTMSERLRNRYYVSKKL 768
Query: 148 ILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAELG 188
++D + +F NC+E+N P S Y+ A LEK ++ E G
Sbjct: 769 FMADLQRVFTNCKEYNPPESEYYKCASILEKFFFSKIKEAG 809
>sp|Q03330|GCN5_YEAST Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GCN5 PE=1 SV=1
Length = 439
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YY IK+P+D+ +E +++ KY+ ++ + D RL+F NCR +N + Y+ A LE
Sbjct: 362 PDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIYDARLVFNNCRMYNGENTSYYKYANRLE 421
Query: 178 KVLLERVAEL 187
K +V E+
Sbjct: 422 KFFNNKVKEI 431
>sp|Q91Y44|BRDT_MOUSE Bromodomain testis-specific protein OS=Mus musculus GN=Brdt PE=1
SV=3
Length = 956
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YY +IK P+D+ I+ ++N+ Y E + DF MF NC +N+ G I A LE
Sbjct: 63 PDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALE 122
Query: 178 KVLLERVAEL 187
K+ +++++++
Sbjct: 123 KLFMQKLSQM 132
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 120 YYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLEKV 179
YY V+K P+D+ I+ + N++Y+ E +D RLMF NC ++N P + A L+ V
Sbjct: 308 YYDVVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDV 367
>sp|Q6FTW5|GCN5_CANGA Histone acetyltransferase GCN5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GCN5 PE=3 SV=1
Length = 546
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 118 PEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNLE 177
P+YY+ IK+P+D+ +E ++N KY +E + D RL+ NCR +N + Y+ A LE
Sbjct: 469 PDYYEFIKEPMDLSTMELKLENNKYEKMEEFIYDARLVCNNCRLYNGENTSYYKYANRLE 528
Query: 178 KVLLERVAEL 187
K +V E+
Sbjct: 529 KFFNNKVKEI 538
>sp|Q756G9|GCN5_ASHGO Histone acetyltransferase GCN5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GCN5
PE=3 SV=1
Length = 452
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 88 TLCKCLMDYRDQDGRQPMLMFMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQDE 147
T+ L + ++ P F++ + P+YY+ IK+P+D+ +E ++N +Y ++
Sbjct: 348 TMQNVLTELQNHAAAWP---FLQPVNRDEVPDYYEFIKEPMDLSTMEIKLENNRYEKMED 404
Query: 148 ILSDFRLMFGNCREFNEPGSLIYEDAVNLEKVLLERVAEL 187
+ D RL+F NCR +N + ++ A LEK ++ E+
Sbjct: 405 FIYDARLIFNNCRAYNGENTSYFKYANRLEKFFNTKMKEI 444
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 112 PSAKIYPEYYKVIKQPIDMCQIESNIQNEK---YRSQDEILSDFRLMFGNCREFNEPGSL 168
P + + YY++IK+P+D+ I +Q + Y + +E++SD RLMF NC +FN P S
Sbjct: 1095 PVSPLARHYYQIIKRPMDLSIIRRKLQKKDPAHYTTPEEVVSDVRLMFWNCAKFNYPDSE 1154
Query: 169 IYEDAVNLEKVLLERVAELGP 189
+ E LE + E+ P
Sbjct: 1155 VAEAGRCLEVFFEGWLKEIYP 1175
>sp|Q02206|RSC4_YEAST Chromatin structure-remodeling complex subunit RSC4
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC4 PE=1 SV=2
Length = 625
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 73 RGKYLDNKPLKRRLYTLCKCLMDYRDQDGRQPMLM----------------FMELPSAKI 116
+ YL N +K +L L+D ++ Q +L FMEL
Sbjct: 162 KRNYLINSEVKAKLLHYLNKLVDATEKKINQALLGASSPKNLDDKVKLSEPFMELVDKDE 221
Query: 117 YPEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGSLIYEDAVNL 176
PEYY+++ P+ + ++ N++ +Y + + D L+F N FN+P +LIY+DA L
Sbjct: 222 LPEYYEIVHSPMALSIVKQNLEIGQYSKIYDFIIDMLLVFQNAHIFNDPSALIYKDATTL 281
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 108 FMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQD---EILSDFRLMFGNCREFNE 164
F++LPS K +P+YY I+QP+ + +I+S Y +D L D L+ NC+ +NE
Sbjct: 80 FIKLPSRKFHPQYYYKIQQPMSINEIKS----RDYEYEDGPSNFLLDVELLTKNCQAYNE 135
Query: 165 PGSLIYEDAV 174
SLI ++++
Sbjct: 136 YDSLIVKNSM 145
>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo sapiens GN=TRIM66 PE=2
SV=4
Length = 1216
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 112 PSAKIYPEYYKVIKQPIDMCQIESNIQNEK---YRSQDEILSDFRLMFGNCREFNEPGSL 168
P + + YY++IK+P+D+ I +Q + Y + +E++SD RLMF NC +FN P S
Sbjct: 1069 PVSPLARHYYQIIKRPMDLSIIRRKLQKKDPAHYTTPEEVVSDVRLMFWNCAKFNYPDSE 1128
Query: 169 IYEDAVNLEKVLLERVAELGP 189
+ E LE + E+ P
Sbjct: 1129 VAEAGRCLEVFFEGWLKEIYP 1149
>sp|Q6CXW4|GCN5_KLULA Histone acetyltransferase GCN5 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GCN5 PE=3 SV=1
Length = 516
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 108 FMELPSAKIYPEYYKVIKQPIDMCQIESNIQNEKYRSQDEILSDFRLMFGNCREFNEPGS 167
F++ + + P+YY+ IK+P+D+ +E + +Y + + D RL+F NCR +N +
Sbjct: 429 FLQPVNKEEVPDYYEFIKEPMDLSSMEMKLNGNRYEKMENFIYDARLIFNNCRAYNGENT 488
Query: 168 LIYEDAVNLEKVLLERVAEL 187
++ A LEK +V E+
Sbjct: 489 SYFKYANRLEKFFNSKVKEI 508
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,554,369
Number of Sequences: 539616
Number of extensions: 3054673
Number of successful extensions: 10608
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 10332
Number of HSP's gapped (non-prelim): 267
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)