Query psy12281
Match_columns 456
No_of_seqs 432 out of 1676
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 23:19:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12281.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12281hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k2o_A Bifunctional arginine d 100.0 6.6E-47 2.2E-51 380.3 24.0 256 74-349 33-305 (336)
2 4gjz_A Lysine-specific demethy 100.0 1.2E-46 4E-51 359.1 17.7 225 87-334 2-235 (235)
3 3kv5_D JMJC domain-containing 100.0 1.7E-42 5.9E-47 362.8 19.3 297 88-437 138-446 (488)
4 3kv9_A JMJC domain-containing 100.0 9.3E-42 3.2E-46 345.9 23.2 299 86-437 45-355 (397)
5 3k3o_A PHF8, PHD finger protei 100.0 7.5E-40 2.6E-44 329.4 22.8 236 87-349 18-266 (371)
6 3al5_A HTYW5, JMJC domain-cont 100.0 2.9E-40 9.8E-45 333.7 17.9 231 84-337 27-277 (338)
7 3kv4_A PHD finger protein 8; e 100.0 6.4E-40 2.2E-44 338.6 20.3 229 96-349 107-350 (447)
8 2yu1_A JMJC domain-containing 100.0 4.1E-40 1.4E-44 340.4 13.7 239 86-349 52-315 (451)
9 3d8c_A Hypoxia-inducible facto 100.0 8.4E-39 2.9E-43 324.2 18.7 232 86-336 40-300 (349)
10 3pua_A GRC5, PHD finger protei 100.0 9.5E-39 3.3E-43 323.0 18.6 236 87-349 45-293 (392)
11 3pur_A Lysine-specific demethy 100.0 3.8E-29 1.3E-33 259.3 18.8 200 133-349 191-415 (528)
12 1vrb_A Putative asparaginyl hy 99.9 3.8E-25 1.3E-29 223.3 16.8 209 89-332 23-252 (342)
13 2jr7_A DPH3 homolog; DESR1, CS 99.9 2.9E-22 9.8E-27 160.2 6.8 65 1-65 1-65 (89)
14 1wge_A Hypothetical protein 26 99.8 7.5E-22 2.6E-26 156.4 6.9 65 1-65 8-72 (83)
15 1yop_A KTI11P; zinc finger, me 99.8 7E-22 2.4E-26 156.5 4.9 65 1-66 2-66 (83)
16 2xdv_A MYC-induced nuclear ant 99.8 5.6E-20 1.9E-24 190.8 10.0 204 93-333 24-235 (442)
17 4diq_A Lysine-specific demethy 99.8 3.1E-17 1.1E-21 170.1 21.9 102 227-336 162-266 (489)
18 2ypd_A Probable JMJC domain-co 99.7 3.1E-18 1.1E-22 170.7 6.6 240 97-351 24-344 (392)
19 2l6l_A DNAJ homolog subfamily 99.3 2E-12 6.8E-17 115.8 6.5 57 3-60 92-148 (155)
20 2xxz_A Lysine-specific demethy 99.1 9.2E-10 3.1E-14 108.9 13.0 233 94-339 23-318 (332)
21 3avr_A Lysine-specific demethy 99.0 2.2E-08 7.4E-13 104.8 21.6 229 101-341 87-379 (531)
22 4ask_A Lysine-specific demethy 98.6 3.6E-07 1.2E-11 94.3 14.5 109 227-338 233-351 (510)
23 3dxt_A JMJC domain-containing 98.2 5E-07 1.7E-11 89.9 3.8 114 227-340 174-302 (354)
24 3opt_A DNA damage-responsive t 97.8 1.4E-05 4.6E-10 80.1 4.2 116 227-342 217-347 (373)
25 2ox0_A JMJC domain-containing 97.7 3.6E-05 1.2E-09 77.5 5.8 114 227-340 192-320 (381)
26 3eqe_A Putative cystein deoxyg 95.9 0.027 9.3E-07 50.5 8.9 72 237-331 77-150 (171)
27 1dgw_A Canavalin; duplicated s 95.4 0.019 6.4E-07 51.7 5.9 63 233-325 46-108 (178)
28 2e9q_A 11S globulin subunit be 95.2 0.059 2E-06 55.8 9.4 78 232-336 326-403 (459)
29 3c3v_A Arachin ARAH3 isoform; 95.1 0.08 2.7E-06 55.4 10.0 78 232-336 376-453 (510)
30 3ksc_A LEGA class, prolegumin; 95.1 0.089 3E-06 54.9 10.2 71 232-329 362-432 (496)
31 1fxz_A Glycinin G1; proglycini 95.0 0.087 3E-06 54.8 10.2 79 231-336 341-419 (476)
32 3fz3_A Prunin; TREE NUT allerg 94.9 0.065 2.2E-06 56.1 8.8 72 231-329 397-468 (531)
33 1fi2_A Oxalate oxidase, germin 94.7 0.11 3.8E-06 47.4 8.9 68 233-325 77-144 (201)
34 1x82_A Glucose-6-phosphate iso 94.6 0.13 4.3E-06 46.7 8.9 58 242-325 86-144 (190)
35 3eln_A Cysteine dioxygenase ty 94.5 0.19 6.4E-06 46.1 9.8 75 237-331 78-156 (200)
36 3kgl_A Cruciferin; 11S SEED gl 94.3 0.16 5.6E-06 52.5 9.9 68 232-326 327-394 (466)
37 3st7_A Capsular polysaccharide 94.2 0.11 3.6E-06 51.5 8.3 75 233-335 276-354 (369)
38 2pfw_A Cupin 2, conserved barr 94.2 0.13 4.5E-06 41.8 7.5 62 237-331 42-103 (116)
39 3fjs_A Uncharacterized protein 94.2 0.15 5.1E-06 42.0 7.8 61 237-330 44-104 (114)
40 3nw4_A Gentisate 1,2-dioxygena 94.2 0.034 1.2E-06 55.9 4.4 27 300-326 142-168 (368)
41 2vqa_A SLL1358 protein, MNCA; 94.1 0.12 4.2E-06 51.2 8.5 64 233-325 57-121 (361)
42 3lag_A Uncharacterized protein 94.1 0.022 7.4E-07 46.1 2.3 26 300-325 59-84 (98)
43 4e2g_A Cupin 2 conserved barre 94.0 0.13 4.5E-06 42.6 7.2 62 237-331 49-111 (126)
44 1yhf_A Hypothetical protein SP 94.0 0.23 7.7E-06 40.3 8.5 61 237-330 48-108 (115)
45 2fqp_A Hypothetical protein BP 94.0 0.17 5.7E-06 40.2 7.5 26 300-325 59-84 (97)
46 2d40_A Z3393, putative gentisa 93.7 0.14 4.7E-06 51.2 7.9 61 237-330 276-336 (354)
47 2d5f_A Glycinin A3B4 subunit; 93.7 0.19 6.6E-06 52.4 9.2 75 232-333 371-445 (493)
48 3bu7_A Gentisate 1,2-dioxygena 93.6 0.18 6E-06 51.2 8.4 25 300-324 332-356 (394)
49 2phl_A Phaseolin; plant SEED s 93.5 0.17 5.7E-06 51.5 8.1 72 233-325 244-315 (397)
50 3qac_A 11S globulin SEED stora 93.5 0.24 8.1E-06 51.2 9.4 71 232-329 327-397 (465)
51 3h8u_A Uncharacterized conserv 93.5 0.1 3.6E-06 43.2 5.6 60 234-326 45-105 (125)
52 2xlg_A SLL1785 protein, CUCA; 93.5 0.15 5.1E-06 48.2 7.3 77 237-325 51-127 (239)
53 2vqa_A SLL1358 protein, MNCA; 93.4 0.21 7.3E-06 49.5 8.8 60 238-325 243-303 (361)
54 1yfu_A 3-hydroxyanthranilate-3 93.4 0.3 1E-05 43.6 8.6 73 228-329 34-107 (174)
55 3nw4_A Gentisate 1,2-dioxygena 93.4 0.2 6.7E-06 50.3 8.3 32 300-331 317-348 (368)
56 1uij_A Beta subunit of beta co 93.3 0.12 4.2E-06 52.8 6.9 65 230-324 51-115 (416)
57 1v70_A Probable antibiotics sy 93.3 0.21 7.3E-06 39.2 7.0 55 238-325 37-92 (105)
58 2ea7_A 7S globulin-1; beta bar 93.3 0.14 4.7E-06 52.7 7.2 65 230-324 63-127 (434)
59 3ibm_A Cupin 2, conserved barr 93.2 0.27 9.2E-06 43.5 8.2 56 237-325 64-120 (167)
60 1lr5_A Auxin binding protein 1 93.2 0.23 7.8E-06 43.4 7.6 64 237-324 49-112 (163)
61 2ozj_A Cupin 2, conserved barr 93.1 0.28 9.7E-06 39.8 7.7 60 238-330 47-106 (114)
62 1zvf_A 3-hydroxyanthranilate 3 93.1 0.49 1.7E-05 42.2 9.4 78 228-330 33-110 (176)
63 3kgz_A Cupin 2 conserved barre 93.0 0.19 6.6E-06 44.0 6.7 55 238-325 53-107 (156)
64 2b8m_A Hypothetical protein MJ 92.9 0.33 1.1E-05 39.6 7.8 56 238-326 36-92 (117)
65 3uss_A Putative uncharacterize 92.8 0.46 1.6E-05 43.9 9.3 76 234-331 78-158 (211)
66 2o8q_A Hypothetical protein; c 92.7 0.21 7.1E-06 41.9 6.4 56 238-325 52-108 (134)
67 1uij_A Beta subunit of beta co 92.6 0.27 9.3E-06 50.2 8.3 84 232-330 253-336 (416)
68 2cav_A Protein (canavalin); vi 92.6 0.32 1.1E-05 50.1 8.7 77 232-325 285-361 (445)
69 3bb6_A Uncharacterized protein 92.5 0.65 2.2E-05 39.3 9.0 63 250-335 38-100 (127)
70 2gu9_A Tetracenomycin polyketi 92.5 0.23 8E-06 39.7 6.2 55 238-325 30-87 (113)
71 1j58_A YVRK protein; cupin, de 92.3 0.34 1.2E-05 48.5 8.4 65 233-326 84-148 (385)
72 2gm6_A Cysteine dioxygenase ty 92.2 0.5 1.7E-05 43.5 8.8 76 233-331 83-164 (208)
73 2y0o_A Probable D-lyxose ketol 92.2 0.62 2.1E-05 41.7 9.1 82 233-326 58-145 (175)
74 4i4a_A Similar to unknown prot 92.2 0.51 1.8E-05 38.9 8.2 62 239-333 44-107 (128)
75 2oa2_A BH2720 protein; 1017534 92.2 0.56 1.9E-05 40.2 8.7 61 238-325 52-113 (148)
76 3jzv_A Uncharacterized protein 92.0 0.22 7.5E-06 44.2 5.9 55 238-325 62-116 (166)
77 3ht1_A REMF protein; cupin fol 92.0 0.15 5.3E-06 43.0 4.7 57 238-325 48-104 (145)
78 2ea7_A 7S globulin-1; beta bar 91.9 0.23 7.7E-06 51.1 6.6 79 232-325 270-348 (434)
79 3bu7_A Gentisate 1,2-dioxygena 91.8 0.21 7.3E-06 50.6 6.2 26 300-325 162-188 (394)
80 3ejk_A DTDP sugar isomerase; Y 91.5 1 3.5E-05 40.3 9.7 72 233-325 57-131 (174)
81 1y3t_A Hypothetical protein YX 91.4 0.52 1.8E-05 45.9 8.4 73 236-342 53-126 (337)
82 3lwc_A Uncharacterized protein 91.4 0.59 2E-05 38.9 7.5 58 234-325 45-102 (119)
83 3rns_A Cupin 2 conserved barre 91.3 0.58 2E-05 43.3 8.3 65 237-334 45-109 (227)
84 3l2h_A Putative sugar phosphat 91.3 0.71 2.4E-05 40.0 8.4 60 233-325 51-112 (162)
85 2cav_A Protein (canavalin); vi 91.2 0.27 9.3E-06 50.6 6.4 63 232-324 90-152 (445)
86 3bcw_A Uncharacterized protein 90.9 0.19 6.5E-06 42.3 4.1 26 301-326 88-113 (123)
87 3cew_A Uncharacterized cupin p 90.6 0.92 3.2E-05 37.3 8.1 59 234-325 32-91 (125)
88 1y3t_A Hypothetical protein YX 90.5 0.61 2.1E-05 45.4 8.0 61 234-326 223-283 (337)
89 2opk_A Hypothetical protein; p 90.5 0.84 2.9E-05 37.3 7.6 24 302-325 75-98 (112)
90 1j58_A YVRK protein; cupin, de 90.4 0.4 1.4E-05 47.9 6.7 62 237-325 265-326 (385)
91 4b29_A Dimethylsulfoniopropion 90.3 0.63 2.1E-05 43.1 7.3 67 233-332 137-204 (217)
92 3i7d_A Sugar phosphate isomera 90.3 0.88 3E-05 39.8 8.0 60 233-325 48-110 (163)
93 1o4t_A Putative oxalate decarb 90.0 0.78 2.7E-05 38.5 7.2 54 239-325 67-121 (133)
94 2bnm_A Epoxidase; oxidoreducta 90.0 1.4 4.9E-05 39.2 9.5 26 300-325 162-188 (198)
95 2d40_A Z3393, putative gentisa 89.8 0.32 1.1E-05 48.5 5.4 25 301-325 140-164 (354)
96 2qnk_A 3-hydroxyanthranilate 3 89.7 0.96 3.3E-05 43.4 8.2 75 228-331 30-104 (286)
97 1o5u_A Novel thermotoga mariti 89.6 0.32 1.1E-05 39.3 4.3 59 233-325 35-93 (101)
98 1juh_A Quercetin 2,3-dioxygena 89.3 1.3 4.4E-05 43.9 9.3 82 234-344 53-137 (350)
99 3h7j_A Bacilysin biosynthesis 89.1 0.68 2.3E-05 43.3 6.8 56 237-325 42-98 (243)
100 4axo_A EUTQ, ethanolamine util 88.7 0.37 1.3E-05 42.2 4.2 31 301-331 103-133 (151)
101 2e2z_A TIM15; protein import, 88.4 0.33 1.1E-05 39.2 3.3 37 20-56 10-49 (100)
102 3qac_A 11S globulin SEED stora 88.2 1.3 4.6E-05 45.6 8.7 89 232-325 54-155 (465)
103 3rns_A Cupin 2 conserved barre 88.1 1.1 3.6E-05 41.5 7.3 57 237-326 161-218 (227)
104 3d82_A Cupin 2, conserved barr 88.0 0.35 1.2E-05 38.0 3.4 28 301-328 69-96 (102)
105 2vpv_A Protein MIF2, MIF2P; nu 88.0 1.5 5.1E-05 38.9 7.8 28 301-328 129-156 (166)
106 1fxz_A Glycinin G1; proglycini 87.9 1.1 3.8E-05 46.5 8.0 88 231-325 51-138 (476)
107 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 87.8 1.8 6.2E-05 39.0 8.3 80 235-335 54-136 (185)
108 2f4p_A Hypothetical protein TM 87.5 1.9 6.7E-05 36.8 8.1 60 233-325 53-112 (147)
109 2e9q_A 11S globulin subunit be 87.4 0.96 3.3E-05 46.7 7.1 86 232-325 67-152 (459)
110 1vj2_A Novel manganese-contain 87.4 0.48 1.7E-05 39.4 4.0 54 239-325 58-111 (126)
111 3h7j_A Bacilysin biosynthesis 87.4 0.55 1.9E-05 43.9 4.9 25 301-325 185-209 (243)
112 2ixk_A DTDP-4-dehydrorhamnose 87.3 2 6.7E-05 38.8 8.3 80 235-335 55-137 (184)
113 1y9q_A Transcriptional regulat 87.2 1.2 4E-05 39.8 6.8 27 301-327 145-171 (192)
114 1vr3_A Acireductone dioxygenas 87.1 3.4 0.00012 37.4 9.8 56 242-325 97-152 (191)
115 2q30_A Uncharacterized protein 87.0 0.64 2.2E-05 37.0 4.4 27 301-327 75-101 (110)
116 3s7i_A Allergen ARA H 1, clone 86.7 1.3 4.5E-05 45.1 7.6 64 232-325 48-111 (418)
117 3s7i_A Allergen ARA H 1, clone 85.3 1.8 6.3E-05 44.0 7.8 88 232-325 267-357 (418)
118 2d5f_A Glycinin A3B4 subunit; 85.2 1.7 5.8E-05 45.2 7.6 90 231-325 48-138 (493)
119 2i45_A Hypothetical protein; n 85.1 0.68 2.3E-05 37.0 3.7 26 301-326 68-93 (107)
120 1dzr_A DTDP-4-dehydrorhamnose 85.1 3.1 0.00011 37.4 8.3 72 235-326 53-128 (183)
121 1wlt_A 176AA long hypothetical 84.7 5.1 0.00017 36.4 9.7 77 235-331 71-151 (196)
122 1juh_A Quercetin 2,3-dioxygena 84.3 2.5 8.5E-05 41.8 8.1 57 238-326 261-317 (350)
123 2ozi_A Hypothetical protein RP 83.6 0.46 1.6E-05 38.2 1.9 25 301-325 60-84 (98)
124 2pa7_A DTDP-6-deoxy-3,4-keto-h 83.4 7 0.00024 33.5 9.6 66 237-330 43-110 (141)
125 3ryk_A DTDP-4-dehydrorhamnose 83.4 7.9 0.00027 35.4 10.4 75 237-331 78-156 (205)
126 3dl3_A Tellurite resistance pr 83.0 5.6 0.00019 33.2 8.4 61 250-334 37-97 (119)
127 1upi_A DTDP-4-dehydrorhamnose 82.7 7.5 0.00025 36.1 10.1 73 234-326 71-147 (225)
128 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 82.4 3.5 0.00012 37.6 7.6 36 297-332 106-141 (197)
129 2pyt_A Ethanolamine utilizatio 82.2 1.1 3.9E-05 37.9 4.0 26 301-326 94-119 (133)
130 2c0z_A NOVW; isomerase, epimer 81.7 5.7 0.00019 36.6 8.8 73 234-326 60-136 (216)
131 1oi6_A PCZA361.16; epimerase, 81.4 11 0.00037 34.4 10.6 72 235-326 53-128 (205)
132 3es1_A Cupin 2, conserved barr 81.3 1.8 6E-05 38.6 5.1 62 231-326 82-143 (172)
133 3kgl_A Cruciferin; 11S SEED gl 81.2 3.3 0.00011 42.7 7.8 91 231-325 46-170 (466)
134 1sef_A Conserved hypothetical 80.7 3.8 0.00013 38.9 7.6 25 301-325 222-246 (274)
135 3c3v_A Arachin ARAH3 isoform; 80.3 3.2 0.00011 43.4 7.3 93 231-326 51-152 (510)
136 3ksc_A LEGA class, prolegumin; 79.5 4.2 0.00014 42.2 8.0 85 232-325 50-135 (496)
137 2rg4_A Uncharacterized protein 79.4 7.3 0.00025 35.7 8.9 39 298-336 167-208 (216)
138 2phl_A Phaseolin; plant SEED s 79.4 2.4 8.2E-05 42.9 5.9 64 231-324 55-124 (397)
139 4hn1_A Putative 3-epimerase in 78.9 17 0.00059 33.0 10.9 80 233-332 48-131 (201)
140 1rc6_A Hypothetical protein YL 77.9 3.3 0.00011 38.9 6.2 25 301-325 219-243 (261)
141 1zrr_A E-2/E-2' protein; nicke 75.1 1.5 5E-05 39.4 2.6 28 298-325 120-147 (179)
142 3i3q_A Alpha-ketoglutarate-dep 71.4 20 0.00068 32.8 9.4 75 238-336 114-204 (211)
143 4ayb_P DNA-directed RNA polyme 68.0 0.85 2.9E-05 31.5 -0.5 32 23-57 3-35 (48)
144 1sfn_A Conserved hypothetical 67.3 13 0.00046 34.4 7.5 26 300-325 204-229 (246)
145 1sq4_A GLXB, glyoxylate-induce 67.0 3.8 0.00013 39.1 3.7 25 301-325 109-133 (278)
146 3d0j_A Uncharacterized protein 66.9 4.5 0.00015 34.7 3.6 28 299-326 75-102 (140)
147 1rc6_A Hypothetical protein YL 63.6 5.5 0.00019 37.3 4.1 25 301-325 100-124 (261)
148 4h7l_A Uncharacterized protein 63.3 4.1 0.00014 35.7 2.8 22 301-322 87-108 (157)
149 3kmh_A D-lyxose isomerase; cup 62.2 17 0.00059 33.8 6.9 88 233-325 110-197 (246)
150 1sef_A Conserved hypothetical 61.9 6.2 0.00021 37.3 4.1 25 301-325 103-127 (274)
151 3es4_A Uncharacterized protein 56.9 5.2 0.00018 33.2 2.2 25 301-325 81-105 (116)
152 1zx5_A Mannosephosphate isomer 56.7 5.7 0.00019 38.5 2.8 30 299-329 157-186 (300)
153 4e2q_A Ureidoglycine aminohydr 55.5 15 0.00052 34.8 5.6 25 301-325 110-134 (266)
154 1wee_A PHD finger family prote 55.5 8.5 0.00029 28.8 3.1 32 20-58 13-44 (72)
155 1qwr_A Mannose-6-phosphate iso 55.5 6.1 0.00021 38.6 2.8 23 300-322 158-180 (319)
156 4e2q_A Ureidoglycine aminohydr 53.8 41 0.0014 31.8 8.2 25 301-325 226-250 (266)
157 2arc_A ARAC, arabinose operon 53.4 12 0.00041 31.4 4.1 24 301-324 57-80 (164)
158 2wfp_A Mannose-6-phosphate iso 52.6 9.8 0.00034 38.3 3.9 25 299-323 239-263 (394)
159 1pmi_A PMI, phosphomannose iso 51.7 10 0.00035 38.7 3.9 24 300-323 266-289 (440)
160 3fz3_A Prunin; TREE NUT allerg 51.0 8.6 0.0003 40.2 3.2 40 231-273 51-90 (531)
161 3myx_A Uncharacterized protein 50.9 15 0.00053 34.2 4.7 24 301-324 206-229 (238)
162 1sfn_A Conserved hypothetical 48.2 11 0.00037 35.1 3.2 25 301-325 87-111 (246)
163 2qnk_A 3-hydroxyanthranilate 3 48.0 43 0.0015 32.0 7.2 34 299-332 243-276 (286)
164 1sq4_A GLXB, glyoxylate-induce 46.9 10 0.00035 36.1 2.8 27 299-325 229-255 (278)
165 1dgw_Y Canavalin; duplicated s 46.1 15 0.00051 29.1 3.2 28 298-325 4-31 (93)
166 3s57_A Alpha-ketoglutarate-dep 42.1 65 0.0022 28.9 7.4 76 241-333 113-201 (204)
167 2q1z_B Anti-sigma factor CHRR, 39.9 50 0.0017 29.4 6.2 29 302-330 161-191 (195)
168 2o1q_A Putative acetyl/propion 37.0 18 0.0006 30.7 2.5 67 232-330 48-115 (145)
169 1twf_L ABC10-alpha, DNA-direct 35.6 8.6 0.00029 28.9 0.2 29 21-55 26-55 (70)
170 1yud_A Hypothetical protein SO 34.6 27 0.00093 30.8 3.4 20 304-323 101-122 (170)
171 3dkq_A PKHD-type hydroxylase S 34.6 44 0.0015 31.1 5.0 38 299-336 157-196 (243)
172 2avu_E Flagellar transcription 34.6 15 0.0005 33.2 1.6 29 21-52 132-161 (192)
173 3ebr_A Uncharacterized RMLC-li 32.5 32 0.0011 29.8 3.5 28 303-330 81-112 (159)
174 3h0g_L DNA-directed RNA polyme 31.4 10 0.00035 27.9 0.1 29 22-56 20-49 (63)
175 3gbg_A TCP pilus virulence reg 27.7 63 0.0022 29.7 4.9 23 301-323 50-72 (276)
176 3na7_A HP0958; flagellar bioge 27.5 20 0.0007 33.5 1.4 32 25-56 198-233 (256)
177 3o70_A PHD finger protein 13; 27.4 39 0.0013 24.9 2.7 28 23-58 19-46 (68)
178 3myx_A Uncharacterized protein 25.9 56 0.0019 30.4 4.1 34 301-334 84-117 (238)
179 3cjx_A Protein of unknown func 25.7 47 0.0016 28.9 3.4 64 232-330 47-114 (165)
180 1wfh_A Zinc finger (AN1-like) 23.7 28 0.00096 25.6 1.2 13 23-35 29-41 (64)
181 1wg2_A Zinc finger (AN1-like) 23.7 28 0.00095 25.6 1.2 13 23-35 29-41 (64)
182 3lqh_A Histone-lysine N-methyl 23.0 30 0.001 30.8 1.6 36 25-64 4-40 (183)
183 3o7a_A PHD finger protein 13 v 22.6 60 0.002 22.3 2.8 26 25-58 6-31 (52)
184 1wff_A Riken cDNA 2810002D23 p 22.0 31 0.0011 26.8 1.2 13 23-35 40-52 (85)
185 1wep_A PHF8; structural genomi 21.2 53 0.0018 24.7 2.4 32 23-61 12-43 (79)
186 1wfp_A Zinc finger (AN1-like) 20.3 35 0.0012 25.8 1.2 12 23-34 39-50 (74)
187 1wfl_A Zinc finger protein 216 20.2 36 0.0012 25.8 1.2 13 22-34 38-50 (74)
188 2kdx_A HYPA, hydrogenase/ureas 20.1 28 0.00097 28.5 0.7 26 22-54 72-99 (119)
No 1
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=100.00 E-value=6.6e-47 Score=380.30 Aligned_cols=256 Identities=23% Similarity=0.433 Sum_probs=210.7
Q ss_pred ccccccccCcCCCCceeeCC-CCCHHHHHHhhcCCCCcEEEecCCCccccccccccCCCCChhHHHHHhCCceEEEEecC
Q psy12281 74 NEQINVTTTALPQVDYNIDP-SHIYPYCFNNFLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCN 152 (456)
Q Consensus 74 ~~~~~~~~~~~p~~I~ri~~-~ls~~~F~~~y~~~~~PvVi~g~~~~Wpa~~~Wt~~~~~~~d~L~~~~Gd~~V~V~~~~ 152 (456)
++.+.+.....+..|+|++. .+|+++|.++|+.+++||||+|++++|||+++|+ ++||++++|+..|+|....
T Consensus 33 ~~~~~~~~~~~~~~I~Ri~~~~lS~eeF~~~y~~~~~PvVi~g~~~~WpA~~~Wt------~~yL~~~~G~~~V~v~~~~ 106 (336)
T 3k2o_A 33 YESFSLSPAAVADNVERADALQLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWT------LERLKRKYRNQKFKCGEDN 106 (336)
T ss_dssp HHHCCCCGGGCCCCCCEEEGGGCCHHHHHHHTTTTTCCEEEESTTTTCTHHHHCS------HHHHHHHSTTCEEEEEECT
T ss_pred hhhhhhchhhcCCCCCEecCCCCCHHHHHHHhhccCCCEEEeCCcCCChhHhhhh------HHHHHHHhCCceEEEEecC
Confidence 34444333346789999974 8999999999999999999999999999999995 7999999999999987532
Q ss_pred cccccCCceEEeeHHHHHHHHHhcccCCCCCCCCeeeeecccccc--CCCCC-cccccCcccCcchhhHhhhhhccCCCc
Q psy12281 153 SYYFNAHEKTNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTR--DFKTE-DIYRVPNVFSSDWLNEYYSEHLEHKDD 229 (456)
Q Consensus 153 ~~~y~~~~~~~m~l~efl~~~~~~~~~~~~~~~~~~Yl~d~~~~~--~~p~l-~~y~~P~~f~~D~ln~~~~~~~~~~~~ 229 (456)
.+....|+|++|++++.+.. +..++||+++++.. .+|+| .+|.+|.+|.+|+++ ++.... +++
T Consensus 107 -----~~~~~~m~~~~fl~~~~~~~------~~~~lYL~d~~~~e~~~~p~L~~dy~~P~~f~~d~~~-~~~~~~--~p~ 172 (336)
T 3k2o_A 107 -----DGYSVKMKMKYYIEYMESTR------DDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQ-YAGEKR--RPP 172 (336)
T ss_dssp -----TSCEEEEEHHHHHHHHHHCC------CSSCCCEEESCGGGSTTGGGGGGGCCCCGGGCCCGGG-GGCTTT--SCC
T ss_pred -----CCceeeecHHHHHHHHHhcC------CCCCceEecccccccccchhHHHhcCCCcccccchhh-hccccc--CCC
Confidence 23467999999999998753 25689999998864 47888 589999999999885 333222 678
Q ss_pred cceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCC---Ccc----cc---CCCcc--cCCCCC-
Q psy12281 230 YRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMG---NLI----SD---MRSVD--WSTLPR- 296 (456)
Q Consensus 230 ~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g---~~p----~d---~~~pd--~~~fp~- 296 (456)
++++|||++||+|++|+|+.++.+|++||.|+|+|+||||.+...||.... ... ++ ...|. ..+||.
T Consensus 173 ~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~ 252 (336)
T 3k2o_A 173 YRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPE 252 (336)
T ss_dssp CEEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGG
T ss_pred ceEEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhccccc
Confidence 999999999999999999999999999999999999999999988886431 111 00 11121 123443
Q ss_pred CceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecCCCCCHHHHHHHHHHH
Q psy12281 297 DTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHVYHEMVSH 349 (456)
Q Consensus 297 ~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~~~nl~~~~~~l~~~ 349 (456)
+++++|+|+|||+||||+||||+|.|+++||+||+||++..|+..+|+.+...
T Consensus 253 ~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~~~~~~~~~ 305 (336)
T 3k2o_A 253 FKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVRG 305 (336)
T ss_dssp GCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHHHHHHHHHH
T ss_pred CceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999999999998654
No 2
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=100.00 E-value=1.2e-46 Score=359.14 Aligned_cols=225 Identities=21% Similarity=0.338 Sum_probs=188.5
Q ss_pred CceeeCCCCCHHHHHHhhcCCCCcEEEecCCCccccccccccCCCCChhHHHHHhCCceEEEEecCcccccCCceEEeeH
Q psy12281 87 VDYNIDPSHIYPYCFNNFLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTL 166 (456)
Q Consensus 87 ~I~ri~~~ls~~~F~~~y~~~~~PvVi~g~~~~Wpa~~~Wt~~~~~~~d~L~~~~Gd~~V~V~~~~~~~y~~~~~~~m~l 166 (456)
.|+|++ .+|+++|+++|+.+++||||+|++++|||+++|+ ++||++++|+..|+|..+............|+|
T Consensus 2 tipri~-~pS~~eF~~~y~~~~~Pvvi~g~~~~wpa~~~w~------~~yL~~~~g~~~v~v~~~~~~~~~~~~~~~~~~ 74 (235)
T 4gjz_A 2 TVPRLH-RPSLQHFREQFLVPGRPVILKGVADHWPCMQKWS------LEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTV 74 (235)
T ss_dssp BCCEEE-SCCHHHHHHHTTTTTCCEEEESSSTTSHHHHHCS------HHHHHHHHTTSEEEEEEC-------CEEEEEEH
T ss_pred CCCCCC-CCCHHHHHHHHhcCCCcEEEeCCCcCCcccccCC------HHHHHHHcCCCeEEEEecCcccCCccceeeccH
Confidence 589996 7999999999999999999999999999999995 799999999999999876554444455788999
Q ss_pred HHHHHHHHhcccCCCCCCCCeeeeeccccccCCCCC-cccccCcccCcchhhHhhhhhccCCCccceeeeCCCCCccccc
Q psy12281 167 KEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTE-DIYRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGPKETWTPLH 245 (456)
Q Consensus 167 ~efl~~~~~~~~~~~~~~~~~~Yl~d~~~~~~~p~l-~~y~~P~~f~~D~ln~~~~~~~~~~~~~~~l~iG~~gs~T~lH 245 (456)
++|++++.... ....+|+.++.+....|++ .++.+|.++..+... ......++|||++||+|++|
T Consensus 75 ~~~~~~~~~~~------~~~~~y~~~~~~~~~~~~l~~d~~~p~~~~~~~~~--------~~~~~~~~wiG~~gs~t~~H 140 (235)
T 4gjz_A 75 NEFISKYIVNE------PRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGE--------EEEITINAWFGPQGTISPLH 140 (235)
T ss_dssp HHHHHHHTSSC------CSSCEEEEEECHHHHCHHHHTTCCCCGGGGGSSSC--------GGGCEEEEEEECTTCEEEEE
T ss_pred HHHHHHHhhcC------CcccceeehhhhhhhhHHHHHhhcCCccccccccc--------cCccceEEEEeCCCCCceee
Confidence 99999886543 3567899999988888887 577788765433211 13456789999999999999
Q ss_pred ccccCccceeEEEEeEEEEEEeCCCCCcccccCCCC-----ccccCCCcccCCCCC---CceEEEEEcCCCEEEeCCCCe
Q psy12281 246 ADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGN-----LISDMRSVDWSTLPR---DTVIIVEQEAGDSIFVPSGWH 317 (456)
Q Consensus 246 ~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~-----~p~d~~~pd~~~fp~---~~~~~~~l~pGD~LfIPsgW~ 317 (456)
+|+++|+ ++||.|+|+|+||||.+...||+.... ..+|..++|+++||+ +++++|+|+|||+||||+|||
T Consensus 141 ~D~~~n~--~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gW~ 218 (235)
T 4gjz_A 141 QDPQQNF--LVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYW 218 (235)
T ss_dssp CCSSEEE--EEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEEEECTTCE
T ss_pred eccccce--EEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEEEeCCCCc
Confidence 9998875 999999999999999999999975322 257888899999875 899999999999999999999
Q ss_pred EEEEeCCCcEEEEeecC
Q psy12281 318 HQVTNLEHTISINHNWI 334 (456)
Q Consensus 318 H~V~nl~~sIsvn~~~~ 334 (456)
|+|+|+++|||||+||.
T Consensus 219 H~V~~l~~sisvn~w~s 235 (235)
T 4gjz_A 219 HYVRALDLSFSVSFWWS 235 (235)
T ss_dssp EEEEESSSEEEEEEEEC
T ss_pred EEEEECCCEEEEEEecC
Confidence 99999999999999983
No 3
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=100.00 E-value=1.7e-42 Score=362.76 Aligned_cols=297 Identities=18% Similarity=0.280 Sum_probs=223.0
Q ss_pred ceeeCC-CCCHHHHHHhhcCCCCcEEEecCC---CccccccccccCCCCChhHHHHHhC-CceEEEEecCcccccCCceE
Q psy12281 88 DYNIDP-SHIYPYCFNNFLSKNKPFILKSCV---NEWNSSLHWVQNKQPNFEYLSNHYG-DIEVPVANCNSYYFNAHEKT 162 (456)
Q Consensus 88 I~ri~~-~ls~~~F~~~y~~~~~PvVi~g~~---~~Wpa~~~Wt~~~~~~~d~L~~~~G-d~~V~V~~~~~~~y~~~~~~ 162 (456)
|.+++. +++.+-|.+.. -++|+||++.. ..||+ .+|+ ++++++.+| +..|+|.++. ++...
T Consensus 138 v~~~~~~~~~~~~~~~~~--~~~Pvli~~~~~lg~~~P~-~~~t------~~~v~~~~G~d~~V~V~Dv~-----~Q~~~ 203 (488)
T 3kv5_D 138 IIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFS------VMDVERYVGGDKVIDVIDVA-----RQADS 203 (488)
T ss_dssp CEECCGGGCCHHHHHHHC--SCSCEEECSCTTTCCBCCC-TTCC------HHHHHHHHCTTCEEEEEETT-----TTEEE
T ss_pred eeccccccchHHHHHhcC--CCCCEEEecCCCcCCcCCC-CCCc------HHHHHHHhCCCceeeeeecC-----ccccc
Confidence 444433 55555443322 38999999865 47999 7895 899999999 8999999886 44568
Q ss_pred EeeHHHHHHHHHhcccCCCCCCCCeeeeeccccccCCCCCcccccCcccCc-chhhHhhhhhccC-C-CccceeeeCCCC
Q psy12281 163 NMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSS-DWLNEYYSEHLEH-K-DDYRFVYMGPKE 239 (456)
Q Consensus 163 ~m~l~efl~~~~~~~~~~~~~~~~~~Yl~d~~~~~~~p~l~~y~~P~~f~~-D~ln~~~~~~~~~-~-~~~~~l~iG~~g 239 (456)
+|+|++|++|+++.. ....+|+.++++... +-...|.+|.+|.+ ||++.+|...... + ...+|+|||++|
T Consensus 204 ~m~l~~yi~y~~~~~------r~~~~nv~slefs~~-~L~~~~~~P~~~~~~d~~~~~wp~~~~~~rP~~~r~~~mG~~g 276 (488)
T 3kv5_D 204 KMTLHNYVKYFMNPN------RPKVLNVISLEFSDT-KMSELVEVPDIAKKLSWVENYWPDDSVFPKPFVQKYCLMGVQD 276 (488)
T ss_dssp EEEHHHHHHHHHSSS------CSSCEEEEEEECTTS-GGGGGCBCCHHHHHHCHHHHHCCTTCSSCCCCCSCEEEEECTT
T ss_pred cccHHHHHHHHhccC------Ccccccccccccccc-hhhccCCCChhhhhhchhhhcCcccccccCcccceEEEEcCCC
Confidence 999999999998753 357899999988753 32258999999954 8999887542211 2 246999999999
Q ss_pred CcccccccccCccceeEEEEeEEEEEEeCCCCCc-ccccCCCCccccCCCcccCCCC---CCceEEEEEcCCCEEEeCCC
Q psy12281 240 TWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEK-YFKDSMGNLISDMRSVDWSTLP---RDTVIIVEQEAGDSIFVPSG 315 (456)
Q Consensus 240 s~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~-~Ly~~~g~~p~d~~~pd~~~fp---~~~~~~~~l~pGD~LfIPsg 315 (456)
|+|++|+|++++++|++||+|+|+|+||||++.. .+|.. ++...++.+.|+ .+++++|+|+|||+||||+|
T Consensus 277 S~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~-----~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsG 351 (488)
T 3kv5_D 277 SYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYES-----WSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTG 351 (488)
T ss_dssp CEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH-----HHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTT
T ss_pred CCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccc-----cccCCccchhhhcccccceEEEeeCCCCEEEeCCC
Confidence 9999999999999999999999999999998764 34431 222223333442 37899999999999999999
Q ss_pred CeEEEEeCCCcEEEEeecCCCCCHHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHh
Q psy12281 316 WHHQVTNLEHTISINHNWINGTNIDHVYHEMVSHLEAVKKEIDDCKDMDDWTSHCQLMLQVSFGINFRQFFDMLKFICQK 395 (456)
Q Consensus 316 W~H~V~nl~~sIsvn~~~~~~~nl~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~f~~~l~~~~~~ 395 (456)
|||+|.|+++||+||+||++..|+..+|+...- +.+++...+..|-.|..++-+++++
T Consensus 352 WwH~V~nledsIai~~NF~~~~nl~~~l~~~~~----------------------e~~~~~~~~~~~p~f~~~~w~~~~~ 409 (488)
T 3kv5_D 352 WIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEM----------------------EKRLKTPDLFKFPFFEAICWFVAKN 409 (488)
T ss_dssp CEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHH----------------------HHHTTCCTTSSCTTHHHHHHHHHHH
T ss_pred ceEEeeCCCCeEEEccccCCccCHHHHHHHHHH----------------------HHhcCCcccccCccHHHHHHHHHHH
Confidence 999999999999999999999999999986642 2344555567777788888889998
Q ss_pred hhhhcccCCccccccccccCccchhccHHHHHHHHHHhhcCC
Q psy12281 396 RLTSLKNGTTIRLYGNWILSLDHTMFDLRKASDVLKLCAQHE 437 (456)
Q Consensus 396 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (456)
+|..+....... . --+.+..--++.|...|+.....+
T Consensus 410 ~l~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~w~~~~ 446 (488)
T 3kv5_D 410 LLETLKELREDG----F-QPQTYLVQGVKALHTALKLWMKKE 446 (488)
T ss_dssp HHHHHHHHHSSS----C-CCCHHHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHhcc----c-CCcHHHHHHHHHHHHHHHHHHhCc
Confidence 888775442211 0 112344556777777788776544
No 4
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=100.00 E-value=9.3e-42 Score=345.94 Aligned_cols=299 Identities=18% Similarity=0.284 Sum_probs=231.8
Q ss_pred CCceeeCC-CCCHHHHHHhhcCCCCcEEEecCC---CccccccccccCCCCChhHHHHHhC-CceEEEEecCcccccCCc
Q psy12281 86 QVDYNIDP-SHIYPYCFNNFLSKNKPFILKSCV---NEWNSSLHWVQNKQPNFEYLSNHYG-DIEVPVANCNSYYFNAHE 160 (456)
Q Consensus 86 ~~I~ri~~-~ls~~~F~~~y~~~~~PvVi~g~~---~~Wpa~~~Wt~~~~~~~d~L~~~~G-d~~V~V~~~~~~~y~~~~ 160 (456)
..|.+++. +++.+-|.+.. -++|+||++.. ..||+ .+|+ ++++++.+| +..|+|.++. ++.
T Consensus 45 ~~v~~i~g~d~t~~y~~~~~--~~~Pvli~~~~glg~~~P~-~~~t------v~~v~~~vG~d~~V~ViDv~-----~Q~ 110 (397)
T 3kv9_A 45 EIIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFS------VMDVERYVGGDKVIDVIDVA-----RQA 110 (397)
T ss_dssp GTCEECCTTTCCHHHHHHHC--SCSCEEESSCTTSCCBCCC-TTCC------HHHHHHHHTTTSEEEEEETT-----TTE
T ss_pred HeeecCCHHHhhHHHHHhcC--CCCcEEEecCccccCcCCC-CCCC------HHHHHHHhCCCceEeeeecC-----ccc
Confidence 35888877 88888665443 57999999865 47999 7895 899999999 8999999986 445
Q ss_pred eEEeeHHHHHHHHHhcccCCCCCCCCeeeeeccccccCCCCCcccccCcccCc-chhhHhhhhhccC-C-CccceeeeCC
Q psy12281 161 KTNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSS-DWLNEYYSEHLEH-K-DDYRFVYMGP 237 (456)
Q Consensus 161 ~~~m~l~efl~~~~~~~~~~~~~~~~~~Yl~d~~~~~~~p~l~~y~~P~~f~~-D~ln~~~~~~~~~-~-~~~~~l~iG~ 237 (456)
..+|+|++|++|+++.. ...++|+.++++... +-...|.+|.+|.+ ||++.++...... + ..++|+|||+
T Consensus 111 ~~~M~l~~yv~Y~~~~~------r~~~lnvislefs~~-~L~~~~~~P~~v~d~Dwv~~~wp~~~~~~rP~v~r~l~mGp 183 (397)
T 3kv9_A 111 DSKMTLHNYVKYFMNPN------RPKVLNVISLEFSDT-KMSELVEVPDIAKKLSWVENYWPDDSVFPKPFVQKYCLMGV 183 (397)
T ss_dssp EEEEEHHHHHHHHHCSS------CSSCEEEEEEECTTS-GGGGGCBCCHHHHHHCHHHHHCCTTCSSCCCCCSCEEEEEC
T ss_pred CccccHHHHHHHHhccC------CCccceecchhhccc-hhccCcCCCceeeccchhhhcCCchhccCCccceeEEEEcC
Confidence 78999999999998763 367899999988754 32358999999995 9999987542211 2 3579999999
Q ss_pred CCCcccccccccCccceeEEEEeEEEEEEeCCCCCc-ccccCCCCccccCCCcccCCC-C--CCceEEEEEcCCCEEEeC
Q psy12281 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEK-YFKDSMGNLISDMRSVDWSTL-P--RDTVIIVEQEAGDSIFVP 313 (456)
Q Consensus 238 ~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~-~Ly~~~g~~p~d~~~pd~~~f-p--~~~~~~~~l~pGD~LfIP 313 (456)
+||+|++|+|+.++.+|++||+|+|+|+|+||++.+ .+|.. ++...++.+.| + .+++++|+|+|||+||||
T Consensus 184 ~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~-----~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIP 258 (397)
T 3kv9_A 184 QDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYES-----WSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 258 (397)
T ss_dssp TTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH-----HHTSGGGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred CCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccc-----cccCCCcchhhhccccCceEEEEECCCCEEEeC
Confidence 999999999999999999999999999999999865 34432 11111112222 2 278999999999999999
Q ss_pred CCCeEEEEeCCCcEEEEeecCCCCCHHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHH
Q psy12281 314 SGWHHQVTNLEHTISINHNWINGTNIDHVYHEMVSHLEAVKKEIDDCKDMDDWTSHCQLMLQVSFGINFRQFFDMLKFIC 393 (456)
Q Consensus 314 sgW~H~V~nl~~sIsvn~~~~~~~nl~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~f~~~l~~~~ 393 (456)
+||||+|.|+++||+|++||+++.|++.+|+...- +.+++...+..|-.|..++-+++
T Consensus 259 sGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~----------------------E~~~k~~~~~~fp~F~~~~w~~a 316 (397)
T 3kv9_A 259 TGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEM----------------------EKRLKTPDLFKFPFFEAICWFVA 316 (397)
T ss_dssp TTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHH----------------------HHHHTCGGGGGSTTHHHHHHHHH
T ss_pred CCCeEEccCCcCeEEECCcccCchhHHHHHHHHHH----------------------HHhcCCCccCcCccHHHHHHHHH
Confidence 99999999999999999999999999999876542 33566667778888999999999
Q ss_pred HhhhhhcccCCccccccccccCccchhccHHHHHHHHHHhhcCC
Q psy12281 394 QKRLTSLKNGTTIRLYGNWILSLDHTMFDLRKASDVLKLCAQHE 437 (456)
Q Consensus 394 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (456)
++++..+......+. .-+.+..--++.|...|+.....+
T Consensus 317 ~~~l~~~~~~~~~~~-----~~~~~~~~g~~~l~~~~~~w~~~~ 355 (397)
T 3kv9_A 317 KNLLETLKELREDGF-----QPQTYLVQGVKALHTALKLWMKKE 355 (397)
T ss_dssp HHHHHHHHHHHTTTC-----CCCHHHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHhcCC-----CCcHHHHHHHHHHHHHHHHHHhcc
Confidence 999998855433210 112345556777778888766543
No 5
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=100.00 E-value=7.5e-40 Score=329.36 Aligned_cols=236 Identities=16% Similarity=0.312 Sum_probs=189.9
Q ss_pred CceeeCC-CCCHHHHHHhhcCCCCcEEEecCC---CccccccccccCCCCChhHHHHHhC-CceEEEEecCcccccCCce
Q psy12281 87 VDYNIDP-SHIYPYCFNNFLSKNKPFILKSCV---NEWNSSLHWVQNKQPNFEYLSNHYG-DIEVPVANCNSYYFNAHEK 161 (456)
Q Consensus 87 ~I~ri~~-~ls~~~F~~~y~~~~~PvVi~g~~---~~Wpa~~~Wt~~~~~~~d~L~~~~G-d~~V~V~~~~~~~y~~~~~ 161 (456)
.|.+++. +++.+.|.+.. -++||||++.. ..||+. +|+ ++++++.+| +..|+|.++. ++..
T Consensus 18 ~v~~i~~~d~t~~y~~~~~--~~~Pvli~~~~glg~~~P~~-~~t------v~~v~~~vG~d~~V~ViDv~-----~Q~~ 83 (371)
T 3k3o_A 18 VILKPTGNQLTVEFLEENS--FSVPILVLKKDGLGMTLPSP-SFT------VRDVEHYVGSDKEIDVIDVT-----RQAD 83 (371)
T ss_dssp TSBCCCTTTCCHHHHHHHT--TCSCEEESSCTTSCCBCCCT-TCC------HHHHHHHHCC-CEEEEEETT-----TTEE
T ss_pred hcccCChhhCcHHHHHhcC--CCCCEEEecCcccCCcCCCC-CCC------HHHHHHHcCCCceEeeeecC-----cCCC
Confidence 4777766 78887776554 47899999755 479987 795 899999999 8999999885 4556
Q ss_pred EEeeHHHHHHHHHhcccCCCCCCCCeeeeeccccccCCCCC-cccccCcccCc-chhhHhhhhhcc-CCCc-cceeeeCC
Q psy12281 162 TNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTE-DIYRVPNVFSS-DWLNEYYSEHLE-HKDD-YRFVYMGP 237 (456)
Q Consensus 162 ~~m~l~efl~~~~~~~~~~~~~~~~~~Yl~d~~~~~~~p~l-~~y~~P~~f~~-D~ln~~~~~~~~-~~~~-~~~l~iG~ 237 (456)
.+|+|++|++|+++.. +..++|+.++++... .| ..|.+|.+|.+ ||++.+|..... .+++ ++|+|||+
T Consensus 84 ~~M~l~~y~dY~~~~~------re~~lnv~d~efs~~--~L~~~~~~P~~~~d~d~~~~~wp~~~~~~rP~~~r~l~mGp 155 (371)
T 3k3o_A 84 CKMKLGDFVKYYYSGK------REKVLNVISLEFSDT--RLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSV 155 (371)
T ss_dssp EEEEHHHHHHHHTCTT------CCSCEEEEEEECTTS--GGGGTCBCCHHHHHHCHHHHHSCSSCSSCCCCCSCEEEEEC
T ss_pred ccccHHHHHHHHhccC------CCCceeeechhccch--hhhccccCCchhhhhhhhhhcCChhhhccCCCceeEEEEcC
Confidence 8999999999998753 367999999988754 24 58999999996 899988754321 2445 69999999
Q ss_pred CCCcccccccccCccceeEEEEeEEEEEEeCCCCCcc-cccCCCCccccCCCcccCCC-C--CCceEEEEEcCCCEEEeC
Q psy12281 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKY-FKDSMGNLISDMRSVDWSTL-P--RDTVIIVEQEAGDSIFVP 313 (456)
Q Consensus 238 ~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~-Ly~~~g~~p~d~~~pd~~~f-p--~~~~~~~~l~pGD~LfIP 313 (456)
+||+|++|+|++++++|+++|+|+|+|+|+||++.+. +|.. +.....+.+.| + .+++++|+|+|||+||||
T Consensus 156 ~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~-----~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIP 230 (371)
T 3k3o_A 156 RDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFEC-----WSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 230 (371)
T ss_dssp TTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH-----HHTSTTGGGSCGGGTSSCCEEEEEETTCEEEEC
T ss_pred CCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccc-----cccCCccchhhcccccCceEEEEECCCcEEEeC
Confidence 9999999999999999999999999999999998643 3331 11111111222 1 378999999999999999
Q ss_pred CCCeEEEEeCCCcEEEEeecCCCCCHHHHHHHHHHH
Q psy12281 314 SGWHHQVTNLEHTISINHNWINGTNIDHVYHEMVSH 349 (456)
Q Consensus 314 sgW~H~V~nl~~sIsvn~~~~~~~nl~~~~~~l~~~ 349 (456)
+||||+|.|+++||+|++||+++.|++.+|+...-+
T Consensus 231 sGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E 266 (371)
T 3k3o_A 231 TGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIE 266 (371)
T ss_dssp TTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHH
T ss_pred CCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHH
Confidence 999999999999999999999999999999987644
No 6
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=100.00 E-value=2.9e-40 Score=333.72 Aligned_cols=231 Identities=17% Similarity=0.305 Sum_probs=187.2
Q ss_pred CCCCceeeCCCCCHHHHHHhhcCCCCcEEEecCCCccccccccccCCCCChhHHHHHhCCceEEEEecCcc--ccc--CC
Q psy12281 84 LPQVDYNIDPSHIYPYCFNNFLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSY--YFN--AH 159 (456)
Q Consensus 84 ~p~~I~ri~~~ls~~~F~~~y~~~~~PvVi~g~~~~Wpa~~~Wt~~~~~~~d~L~~~~Gd~~V~V~~~~~~--~y~--~~ 159 (456)
....|+|++ .+|+++|.++|+.+++||||+| +.+|||.++|+ ++||++++|+..|+|..+... .|. ..
T Consensus 27 ~~~~I~r~~-~lS~~eF~~~y~~~~kPvVi~g-~~~wpa~~~Ws------~dyL~~~~g~~~V~v~~~~~~~~~~~~~~~ 98 (338)
T 3al5_A 27 QHLPVPRLE-GVSREQFMQHLYPQRKPLVLEG-IDLGPCTSKWT------VDYLSQVGGKKEVKIHVAAVAQMDFISKNF 98 (338)
T ss_dssp CCCBCCEEE-SCCHHHHHHHTGGGCCCEEEES-CCCCTHHHHCC------HHHHHHHHCSCEEEEEC----CCCC-CCCC
T ss_pred CCCCCCEEC-CCCHHHHHHHhhcCCCeEEEeC-CCCCcccccCC------HHHHHHhhCCceEEEEEcCCCCcccccccc
Confidence 346799996 6999999999999999999999 88999999995 799999999999999754321 121 12
Q ss_pred ceEEeeHHHHHHHHHhcccCC-CCCCCCeeeeeccc---------cccCCCCC-cccccCcccCcchhhHhhhhhccCCC
Q psy12281 160 EKTNMTLKEYTIYWQNKIDGK-LSETEPLYYLKDWH---------FTRDFKTE-DIYRVPNVFSSDWLNEYYSEHLEHKD 228 (456)
Q Consensus 160 ~~~~m~l~efl~~~~~~~~~~-~~~~~~~~Yl~d~~---------~~~~~p~l-~~y~~P~~f~~D~ln~~~~~~~~~~~ 228 (456)
....|+|++|++++....+.. .......+||+++. +...+|+| .+|.+|.+|..|.+.
T Consensus 99 ~~~~~~f~efl~~~~~~~~~~~l~~~~~~~Yl~~~~~~~~~~~~~l~~~~p~L~~d~~~P~~~~~d~~~----------- 167 (338)
T 3al5_A 99 VYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKEEQFF----------- 167 (338)
T ss_dssp CEEEEEHHHHHHHHHC-CCSSCSSCTTCCCEEECCCSSTTTCCCCHHHHCHHHHTTCCCCCCSCGGGEE-----------
T ss_pred eeEEeEHHHHHHHHHhccccccccCCCcccchhhcccccccchhhHhHHCHHHHHhcCCCccccccccc-----------
Confidence 357899999999987654311 11235679999863 44556776 588899888765421
Q ss_pred ccceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCc--cccCCCcccCCCCC---CceEEEE
Q psy12281 229 DYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNL--ISDMRSVDWSTLPR---DTVIIVE 303 (456)
Q Consensus 229 ~~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~--p~d~~~pd~~~fp~---~~~~~~~ 303 (456)
..++|||++|++|++|+|+++|+ ++||.|+|+|+||||.+...||+. |.. .+|+.+||+++||+ +++++++
T Consensus 168 -~s~l~~g~~g~~~~~H~D~~~n~--~~qv~G~K~w~L~pP~~~~~ly~~-~~~~~~~d~~~~d~~~~p~~~~~~~~~~~ 243 (338)
T 3al5_A 168 -SSVFRISSPGLQLWTHYDVMDNL--LIQVTGKKRVVLFSPRDAQYLYLK-GTKSEVLNIDNPDLAKYPLFSKARRYECS 243 (338)
T ss_dssp -EEEEEEECTTCEEEEECCSSEEE--EEECSSCEEEEEECGGGGGGGTEE-TTEESCCCSSSCCTTTCTTGGGCCEEEEE
T ss_pred -cceeEECCCCCCccceECCcccE--EEEEEEEEEEEEECcccccccccC-CCCcccccCCCcchhhCcccccCCCEEEE
Confidence 24799999999999999999865 999999999999999999999874 322 46888899988886 6799999
Q ss_pred EcCCCEEEeCCCCeEEEEeCCCcEEEEeecCCCC
Q psy12281 304 QEAGDSIFVPSGWHHQVTNLEHTISINHNWINGT 337 (456)
Q Consensus 304 l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~~~ 337 (456)
|+|||+||||+||||+|.|+++|||||+||.+..
T Consensus 244 L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~ 277 (338)
T 3al5_A 244 LEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLP 277 (338)
T ss_dssp ECTTCEEEECTTCEEEEEESSCEEEEEEEECSSC
T ss_pred ECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCc
Confidence 9999999999999999999999999999999865
No 7
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=100.00 E-value=6.4e-40 Score=338.61 Aligned_cols=229 Identities=17% Similarity=0.328 Sum_probs=183.4
Q ss_pred CHHHHHHhhcCC---CCcEEEecCC---CccccccccccCCCCChhHHHHHhC-CceEEEEecCcccccCCceEEeeHHH
Q psy12281 96 IYPYCFNNFLSK---NKPFILKSCV---NEWNSSLHWVQNKQPNFEYLSNHYG-DIEVPVANCNSYYFNAHEKTNMTLKE 168 (456)
Q Consensus 96 s~~~F~~~y~~~---~~PvVi~g~~---~~Wpa~~~Wt~~~~~~~d~L~~~~G-d~~V~V~~~~~~~y~~~~~~~m~l~e 168 (456)
+.++|..+|+.+ ++|+||++.. ..||+. +|+ ++++++.+| +..|+|.++. ++...+|+|++
T Consensus 107 ~g~~~~~~~~~~~~~~~Pvli~~~~glgm~~P~~-~~t------v~~v~~~~G~d~~V~ViDv~-----~Q~~~~M~l~~ 174 (447)
T 3kv4_A 107 TGNQLTVEFLEENSFSVPILVLKKDGLGMTLPSP-SFT------VRDVEHYVGSDKEIDVIDVT-----RQADCKMKLGD 174 (447)
T ss_dssp CTTTCCHHHHHHTTSCSCEEESSCTTSCCBCCCT-TCC------HHHHHHHHCTTCEEEEEETT-----TTEEEEEEHHH
T ss_pred chhhchHHHHHhcCCCCCEEEecCcccCCcCCCc-cCC------HHHHHHHcCCCceEcceecC-----cCccccccHHH
Confidence 444554455544 8999999654 579987 785 799999999 8999999875 45578999999
Q ss_pred HHHHHHhcccCCCCCCCCeeeeeccccccCCCCC-cccccCcccCc-chhhHhhhhhcc-CCC-ccceeeeCCCCCcccc
Q psy12281 169 YTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTE-DIYRVPNVFSS-DWLNEYYSEHLE-HKD-DYRFVYMGPKETWTPL 244 (456)
Q Consensus 169 fl~~~~~~~~~~~~~~~~~~Yl~d~~~~~~~p~l-~~y~~P~~f~~-D~ln~~~~~~~~-~~~-~~~~l~iG~~gs~T~l 244 (456)
|++|+++.. +..++|+.++++... .| .+|.+|.+|.+ ||++.+|..... .++ .++|+|||++||+|++
T Consensus 175 y~dy~~~~~------r~~~lnv~d~efs~~--~L~~~~~~P~~~~~~D~~~~lw~~~~~~~rP~v~r~~~mG~~gS~T~~ 246 (447)
T 3kv4_A 175 FVKYYYSGK------REKVLNVISLEFSDT--RLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDF 246 (447)
T ss_dssp HHHHHHSSC------CSSCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHCCSCTTSCCCCCSCEEEEECTTEEEEE
T ss_pred HHHHHhccC------CCCceeecccccccc--hhhhccCCCceecccchhhhcccchhhccCCCceeEEEEeCCCCCCCe
Confidence 999998753 357999999998764 35 58999999985 899988753221 134 4999999999999999
Q ss_pred cccccCccceeEEEEeEEEEEEeCCCCCcc-cccCCCCccccCCCcccCCC-C--CCceEEEEEcCCCEEEeCCCCeEEE
Q psy12281 245 HADVFHSYSWSVNICGRKQWLLLAPGNEKY-FKDSMGNLISDMRSVDWSTL-P--RDTVIIVEQEAGDSIFVPSGWHHQV 320 (456)
Q Consensus 245 H~D~~~~~sW~~~i~G~Krw~L~pP~~~~~-Ly~~~g~~p~d~~~pd~~~f-p--~~~~~~~~l~pGD~LfIPsgW~H~V 320 (456)
|+|++++++|+++|+|+|+|+|+||++... +|.. +....++.+.| + .+++++|+|+|||+||||+||||+|
T Consensus 247 HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~-----~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWwH~V 321 (447)
T 3kv4_A 247 HIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFEC-----WSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAV 321 (447)
T ss_dssp ECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHH-----HHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCEEEE
T ss_pred eECCCCCceeEEEeeeEEEEEEeCCCcccccchhh-----cccCcchhhhhccccccceEEEEECCCcEEecCCCCeEEE
Confidence 999999999999999999999999997642 2211 11111222222 1 3789999999999999999999999
Q ss_pred EeCCCcEEEEeecCCCCCHHHHHHHHHHH
Q psy12281 321 TNLEHTISINHNWINGTNIDHVYHEMVSH 349 (456)
Q Consensus 321 ~nl~~sIsvn~~~~~~~nl~~~~~~l~~~ 349 (456)
.|+++||+|++||++..|++.+|+.+.-+
T Consensus 322 ~nledsIai~~NF~~~~nl~~~l~~~~~E 350 (447)
T 3kv4_A 322 LTPVDCLAFGGNFLHSLNIEMQLKAYEIE 350 (447)
T ss_dssp EESSCEEEEEEEECCSTTHHHHHHHHHHH
T ss_pred ecCCCEEEEccccccccCHHHHHHHHHHH
Confidence 99999999999999999999999988754
No 8
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=100.00 E-value=4.1e-40 Score=340.41 Aligned_cols=239 Identities=17% Similarity=0.271 Sum_probs=180.5
Q ss_pred CCceeeCC-CCCHHHHHHhhcCCCCcEEEecCCCcccc---ccccccCCCCChhHHHHHhC-CceEEEEecCcccccCCc
Q psy12281 86 QVDYNIDP-SHIYPYCFNNFLSKNKPFILKSCVNEWNS---SLHWVQNKQPNFEYLSNHYG-DIEVPVANCNSYYFNAHE 160 (456)
Q Consensus 86 ~~I~ri~~-~ls~~~F~~~y~~~~~PvVi~g~~~~Wpa---~~~Wt~~~~~~~d~L~~~~G-d~~V~V~~~~~~~y~~~~ 160 (456)
..|+|++. ++|+ +|+++ ..+++||||+|+ ++||| .++|+ ++||++.+| +..|+|.++.. +.
T Consensus 52 ~~V~ri~~~~Ls~-EF~~~-~~~nkPVVIt~~-~~Wpa~~P~~kWt------~dyL~~~~G~d~~V~V~D~~~-----q~ 117 (451)
T 2yu1_A 52 NFVTFMEGKDFNV-EYIQR-GGLRDPLIFKNS-DGLGIKMPDPDFT------VNDVKMCVGSRRMVDVMDVNT-----QK 117 (451)
T ss_dssp CCCEECCGGGCSH-HHHHH-HCSCSCEEESSC-TTTTCBCCCTTCC------HHHHHHHTCTTCCCCCEETTS-----SC
T ss_pred CceEecccccCCH-HHHHh-cCCCCcEEEccC-cCCCCcCCcCCCC------HHHHHHHcCCCceEeeEEcCC-----Cc
Confidence 67999977 8999 99988 579999999998 99999 78995 799999999 58999987643 33
Q ss_pred eEEeeHHHHHHHHHhcccCCCCCCCCeeee-eccccccCCCCCc-ccccCcccCc-chhhHhhhhh------------c-
Q psy12281 161 KTNMTLKEYTIYWQNKIDGKLSETEPLYYL-KDWHFTRDFKTED-IYRVPNVFSS-DWLNEYYSEH------------L- 224 (456)
Q Consensus 161 ~~~m~l~efl~~~~~~~~~~~~~~~~~~Yl-~d~~~~~~~p~l~-~y~~P~~f~~-D~ln~~~~~~------------~- 224 (456)
..+|+|++|++|+++..+ ++.++|+ .+++|.... +. .+..|.+..+ ||++.++... +
T Consensus 118 ~~~M~l~eyidy~~~~~d-----~r~~LY~v~sLeF~~~~--l~~~~~~P~l~~d~Dwv~~~~p~~l~~~~~d~f~~lge 190 (451)
T 2yu1_A 118 GIEMTMAQWTRYYETPEE-----EREKLYNVISLEFSHTR--LENMVQRPSTVDFIDWVDNMWPRHLKESQTESTNAILE 190 (451)
T ss_dssp CTTCCHHHHHHHHTSCTT-----TCCSCEEEEEECCTTST--TGGGCBCCHHHHHHCHHHHHSCGGGCC-----------
T ss_pred ceeeeHHHHHHHHhhccc-----cccchhhhccccccccc--ccccccCchhhhhhhcccccCchhhhhhhhhhhhhccc
Confidence 568999999999987643 2356776 444443221 11 2333433221 3555444321 0
Q ss_pred cCCCcc-ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCccc-ccCCCCccccCCCcccCCCCC--CceE
Q psy12281 225 EHKDDY-RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYF-KDSMGNLISDMRSVDWSTLPR--DTVI 300 (456)
Q Consensus 225 ~~~~~~-~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~L-y~~~g~~p~d~~~pd~~~fp~--~~~~ 300 (456)
..++++ +|+|||++||+|++|+|++++.+|++||+|+|+|+||||++...+ |... . ......+ .-||. .+++
T Consensus 191 ~~rP~~~r~~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~-~--~s~~q~~-~~~p~~~~~~~ 266 (451)
T 2yu1_A 191 MQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENW-L--LSGSQGD-IFLGDRVSDCQ 266 (451)
T ss_dssp CCSCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHH-H--HTTCCSS-SCHHHHSSCCE
T ss_pred ccCCchheEEEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccc-c--ccccchh-hhhccccccce
Confidence 125667 999999999999999999999999999999999999999997542 2210 0 0000000 01232 5789
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecCCCCCHHHHHHHHHHH
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHVYHEMVSH 349 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~~~nl~~~~~~l~~~ 349 (456)
+|+|+|||+||||+||||+|.|+++||+|++||+++.|+..+|+++.-+
T Consensus 267 ~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E 315 (451)
T 2yu1_A 267 RIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIE 315 (451)
T ss_dssp EEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHH
T ss_pred EEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998754
No 9
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=100.00 E-value=8.4e-39 Score=324.18 Aligned_cols=232 Identities=17% Similarity=0.278 Sum_probs=177.2
Q ss_pred CCceeeCCCCCHHHHHHhhcCCCCcEEEecCCCccccccccccCCCCChhHHHHHhCCceEEEEecCc--ccccC-----
Q psy12281 86 QVDYNIDPSHIYPYCFNNFLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNS--YYFNA----- 158 (456)
Q Consensus 86 ~~I~ri~~~ls~~~F~~~y~~~~~PvVi~g~~~~Wpa~~~Wt~~~~~~~d~L~~~~Gd~~V~V~~~~~--~~y~~----- 158 (456)
..|+|++ .+|++ | ++|+.+++||||+|+..+||| ++|+ ++||++++|+..|+|..+.. ..|.+
T Consensus 40 ~~I~Rv~-~~s~~-~-~~y~~~~~PVVi~g~~~~wpA-~kWt------~eyL~~~~G~~~V~V~~~~~~~~~y~d~~~~~ 109 (349)
T 3d8c_A 40 RPIPRLS-QSDPR-A-EELIENEEPVVLTDTNLVYPA-LKWD------LEYLQENIGNGDFSVYSASTHKFLYYDEKKMA 109 (349)
T ss_dssp EECCEEC-TTCHH-H-HHHHHTTCCEEESCCCTTGGG-GGCC------HHHHHHHSCSSCEEEEEESSSBCCCCCGGGTT
T ss_pred CCceEec-CCChh-H-HHHhcCCccEEEeCCCCCccc-ccCC------HHHHHHhhCCCeEEEEECCCCccccccccccc
Confidence 5799996 67887 5 789999999999999999999 8995 79999999999999875432 12221
Q ss_pred -------C-ceEEeeHHHHHHHHHhcccCCCCCCCCeeeeeccccccCCCCC-cccccCcccCcchhhHhhhhhccCCCc
Q psy12281 159 -------H-EKTNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTE-DIYRVPNVFSSDWLNEYYSEHLEHKDD 229 (456)
Q Consensus 159 -------~-~~~~m~l~efl~~~~~~~~~~~~~~~~~~Yl~d~~~~~~~p~l-~~y~~P~~f~~D~ln~~~~~~~~~~~~ 229 (456)
. .+..|+|++|++++.+.... .+...+||+++......|.+ .+|.. |..+|++.+....+ ..+.
T Consensus 110 ~~~~F~~~~~~~~m~~~efl~~~~~~~~~---~~~~~~YL~~~~~~~~~~~l~~D~~~---~~~~~~~~~~~~~~-~~~~ 182 (349)
T 3d8c_A 110 NFQNFKPRSNREEMKFHEFVEKLQDIQQR---GGEERLYLQQTLNDTVGRKIVMDFLG---FNWNWINKQQGKRG-WGQL 182 (349)
T ss_dssp SCTTCCCSEEEEEECHHHHHHHHHHHHHH---TCCCEEEEEEECCTTSCHHHHHHHHT---SCHHHHHHHHHHTT-CCCE
T ss_pred ccccccccceeEeeEHHHHHHHHHhhccc---CCCCCeeeecccccccchhhhhhhhc---cchhhhhhhhhccc-cCcc
Confidence 1 25799999999999875321 13468999987544333333 12211 23356554432221 1122
Q ss_pred c-ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCC------CccccCCCcccCCCCC---Cce
Q psy12281 230 Y-RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMG------NLISDMRSVDWSTLPR---DTV 299 (456)
Q Consensus 230 ~-~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g------~~p~d~~~pd~~~fp~---~~~ 299 (456)
+ .++|||++|++|++|+|+++| |++||.|+|+|+||||.+...||+... ...+|+.+||+++||+ +++
T Consensus 183 ~~~~l~iG~~gs~t~~H~D~~~n--~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~ 260 (349)
T 3d8c_A 183 TSNLLLIGMEGNVTPAHYGEQQN--FFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVG 260 (349)
T ss_dssp EECEEEEECTTCEEEEECCSEEE--EEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCE
T ss_pred ccceEEEECCCCCccceECChhc--EEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCc
Confidence 2 469999999999999999964 599999999999999999988887532 2357778889988885 689
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEeCC---CcEEEEeecCCC
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTNLE---HTISINHNWING 336 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~nl~---~sIsvn~~~~~~ 336 (456)
++++|+|||+||||+||||+|.|++ .|||||+||.+.
T Consensus 261 ~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~~~~ 300 (349)
T 3d8c_A 261 YETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA 300 (349)
T ss_dssp EEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEEECC
T ss_pred EEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEcCCC
Confidence 9999999999999999999999998 389999999655
No 10
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=100.00 E-value=9.5e-39 Score=323.02 Aligned_cols=236 Identities=14% Similarity=0.282 Sum_probs=186.2
Q ss_pred CceeeCC-CCCHHHHHHhhcCCCCcEEEecCC---CccccccccccCCCCChhHHHHHhC-CceEEEEecCcccccCCce
Q psy12281 87 VDYNIDP-SHIYPYCFNNFLSKNKPFILKSCV---NEWNSSLHWVQNKQPNFEYLSNHYG-DIEVPVANCNSYYFNAHEK 161 (456)
Q Consensus 87 ~I~ri~~-~ls~~~F~~~y~~~~~PvVi~g~~---~~Wpa~~~Wt~~~~~~~d~L~~~~G-d~~V~V~~~~~~~y~~~~~ 161 (456)
-|.+++. +++.+-|.+.. -++|+||++.. ..||+ .+|+ ++++++.+| +..|+|.++. ++..
T Consensus 45 ~v~~~~g~~f~~~yl~~~g--~~~Pvli~~~~glgm~~P~-~~~t------v~~v~~~vG~d~~V~ViDv~-----~Q~~ 110 (392)
T 3pua_A 45 VVARVPGSQLTLGYMEEHG--FTEPILVPKKDGLGLAVPA-PTFY------VSDVENYVGPERSVDVTDVT-----KQKD 110 (392)
T ss_dssp TSEECCGGGCCHHHHHHHT--TCSCEEESSCTTTTCBCCC-TTCC------HHHHHHHHCTTCEEEEEETT-----TTEE
T ss_pred eEecCChhhchHHHHHhcC--CCccEEEeCCccccCcCCC-CCCC------HHHHHHHcCCCcEEeeeecC-----cCcC
Confidence 3566654 56655443333 38999999755 58998 6795 899999999 8999999875 4557
Q ss_pred EEeeHHHHHHHHHhcccCCCCCCCCeeeeeccccccCCCCC-cccccCcccCc-chhhHhhhhhcc-CCC-ccceeeeCC
Q psy12281 162 TNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTE-DIYRVPNVFSS-DWLNEYYSEHLE-HKD-DYRFVYMGP 237 (456)
Q Consensus 162 ~~m~l~efl~~~~~~~~~~~~~~~~~~Yl~d~~~~~~~p~l-~~y~~P~~f~~-D~ln~~~~~~~~-~~~-~~~~l~iG~ 237 (456)
.+|+|++|++|+++.. +..++|+.++.+... .| ..+..|.++.+ ||++.++..... .++ +++|+|||+
T Consensus 111 ~~M~l~~yv~Y~~~~~------re~~lnv~dlefs~t--~L~~~~~~P~lv~d~d~v~~~wp~~~~~~rP~v~r~~~mGp 182 (392)
T 3pua_A 111 CKMKLKEFVDYYYSTN------RKRVLNVTNLEFSDT--RMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICV 182 (392)
T ss_dssp EEEEHHHHHHHHTCSS------CCSCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHSCTTCSSCCCSCSCEEEEEC
T ss_pred ccccHHHHHHHHhccC------CCcceEeeecccccc--hhhccccCchhhhhhhhhhhccchhhhhcCCCceeEEEEeC
Confidence 8999999999998763 368999999988754 24 47889988886 788877754321 134 499999999
Q ss_pred CCCcccccccccCccceeEEEEeEEEEEEeCCCCCcc-cccCCCCccccCCCcccCCC-C--CCceEEEEEcCCCEEEeC
Q psy12281 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKY-FKDSMGNLISDMRSVDWSTL-P--RDTVIIVEQEAGDSIFVP 313 (456)
Q Consensus 238 ~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~-Ly~~~g~~p~d~~~pd~~~f-p--~~~~~~~~l~pGD~LfIP 313 (456)
+||+|++|+|++++.+|+++++|+|+|+|+||.+... +|.. ++....+.+.| + ..++++|+|+|||+||||
T Consensus 183 ~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~-----~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIP 257 (392)
T 3pua_A 183 KDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYER-----WRSASNHSEMFFADQVDKCYKCIVKQGQTLFIP 257 (392)
T ss_dssp TTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH-----HHHSTTGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred CCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhh-----cccCcchhhhhhcccccceEEEEECCCcEEeeC
Confidence 9999999999999999999999999999999988642 2221 11111112222 1 268899999999999999
Q ss_pred CCCeEEEEeCCCcEEEEeecCCCCCHHHHHHHHHHH
Q psy12281 314 SGWHHQVTNLEHTISINHNWINGTNIDHVYHEMVSH 349 (456)
Q Consensus 314 sgW~H~V~nl~~sIsvn~~~~~~~nl~~~~~~l~~~ 349 (456)
+||||+|.|+++||+|++||+++.|++.+|+.++-+
T Consensus 258 sGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E 293 (392)
T 3pua_A 258 SGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVE 293 (392)
T ss_dssp TTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHH
Confidence 999999999999999999999999999999988754
No 11
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=99.96 E-value=3.8e-29 Score=259.26 Aligned_cols=200 Identities=18% Similarity=0.327 Sum_probs=157.8
Q ss_pred ChhHHHHHhC-CceEEEEecCcccccCCceEEeeHHHHHHHHHhcccCCCCCCCCeeeeeccccccCCCCC-cccccCcc
Q psy12281 133 NFEYLSNHYG-DIEVPVANCNSYYFNAHEKTNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTE-DIYRVPNV 210 (456)
Q Consensus 133 ~~d~L~~~~G-d~~V~V~~~~~~~y~~~~~~~m~l~efl~~~~~~~~~~~~~~~~~~Yl~d~~~~~~~p~l-~~y~~P~~ 210 (456)
+++.+.+..| +..|.|-+.. ++....|+|++|++|+.+.. .....+++.++.+... +.| ..+++|.+
T Consensus 191 tv~dV~~~vG~d~~VdVIDV~-----tQ~~~~mtl~~~~~yf~~~~-----~R~~i~NviSLEfS~~-~~L~~~v~~P~~ 259 (528)
T 3pur_A 191 DLEDVVKIMGSDYEVDTIDVY-----NQSTYSMKLDTFRKLFRDTK-----NRPLLYNFLSLEFSDN-NEMKEIAKPPRF 259 (528)
T ss_dssp CHHHHHHHHCTTCEEEEEETT-----TTEEEEEEHHHHHHHHHCCS-----CCSSCEEECCEECTTS-TTHHHHSCCCHH
T ss_pred CHHHHHHhhCCCceEeeEECC-----CCCCCcCcHHHHHHHhcCcc-----ccceeeEEeeEEecCc-hhhhccccCCcE
Confidence 4678888887 6889998764 45567899999999998742 1356788999988753 666 46889999
Q ss_pred cCc-chhhHhhhhhc----------------cCCCc-cceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCC
Q psy12281 211 FSS-DWLNEYYSEHL----------------EHKDD-YRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE 272 (456)
Q Consensus 211 f~~-D~ln~~~~~~~----------------~~~~~-~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~ 272 (456)
+.+ ||++.+|+... ..++. .+|++||++||+|.+|+|+.++.+|++++.|+|+|+|+||+..
T Consensus 260 Vr~ld~v~~~Wp~~~~~~~~~~~~~~~~~~~~~rP~v~rf~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~ 339 (528)
T 3pur_A 260 VQEISMVNRLWPDVSGAEYIKLLQREEYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQ 339 (528)
T ss_dssp HHHHCHHHHHSCCC-------------CCCGGGSCCCSSEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHH
T ss_pred EecccHHHHhcCcccchhhhhhhhcccccccccCCCeeEEEEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCcc
Confidence 988 99999986421 01344 5999999999999999999999999999999999999999865
Q ss_pred cc-cccCCCCccccCCCcccCCC-C---CCceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecCCCCCHHHHHHHHH
Q psy12281 273 KY-FKDSMGNLISDMRSVDWSTL-P---RDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHVYHEMV 347 (456)
Q Consensus 273 ~~-Ly~~~g~~p~d~~~pd~~~f-p---~~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~~~nl~~~~~~l~ 347 (456)
.. +|... .. +++...| + ....++|+|+|||+||||+||||+|.|+++||+|++||++..|++.+++...
T Consensus 340 nl~~y~~w-----~~-s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~ 413 (528)
T 3pur_A 340 NFAAYQAH-----ET-SPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYH 413 (528)
T ss_dssp HHHHHHHH-----HH-SSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHH
T ss_pred chhhhhhh-----cc-CCchhhhhcccccccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHH
Confidence 32 22210 00 1111112 1 2467899999999999999999999999999999999999999999999887
Q ss_pred HH
Q psy12281 348 SH 349 (456)
Q Consensus 348 ~~ 349 (456)
-+
T Consensus 414 iE 415 (528)
T 3pur_A 414 LE 415 (528)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 12
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=99.93 E-value=3.8e-25 Score=223.28 Aligned_cols=209 Identities=15% Similarity=0.143 Sum_probs=133.4
Q ss_pred eeeCCCCCHHHHHHhhcCCCCcEEEecCCCcc-ccccccccCCCCChhHHHHHhCC-----ceEEEEecC--cccccCCc
Q psy12281 89 YNIDPSHIYPYCFNNFLSKNKPFILKSCVNEW-NSSLHWVQNKQPNFEYLSNHYGD-----IEVPVANCN--SYYFNAHE 160 (456)
Q Consensus 89 ~ri~~~ls~~~F~~~y~~~~~PvVi~g~~~~W-pa~~~Wt~~~~~~~d~L~~~~Gd-----~~V~V~~~~--~~~y~~~~ 160 (456)
+++ ..+|+++|+++|+ .++|+||+++ .+| ++ .|+ +++|.+.+++ ..|.+...+ ...|.. .
T Consensus 23 ~ll-~~is~e~F~~~yw-~kkPlvir~~-~~~~~~--l~s------~~~L~~l~~~~~v~~~~vrl~~~~~~~~~~~~-~ 90 (342)
T 1vrb_A 23 SII-SPVTMSEFLEEYW-PVKPLVARGE-VERFTS--IPG------FEKVRTLENVLAIYNNPVMVVGDAVIEESEGI-T 90 (342)
T ss_dssp HHH-TTSCHHHHHHHTT-TTSCEEECCC-GGGGGG--STT------CGGGSSHHHHHHHCCSCEEEC-------------
T ss_pred HHH-cCCCHHHHHHHHh-ccCCEEEcCC-cccccC--CCC------HHHHHHHHhhcCcCcCceEEeCCCcCcccccc-C
Confidence 344 4899999999999 7899999998 665 43 343 2444433332 233432111 111221 1
Q ss_pred eE-EeeHHHHHHHHHhcccCCCCCCCCeeeeeccccccCCCCCcccccCcccCcchhhHhhhhhc--cCCCccceeeeCC
Q psy12281 161 KT-NMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSSDWLNEYYSEHL--EHKDDYRFVYMGP 237 (456)
Q Consensus 161 ~~-~m~l~efl~~~~~~~~~~~~~~~~~~Yl~d~~~~~~~p~l~~y~~P~~f~~D~ln~~~~~~~--~~~~~~~~l~iG~ 237 (456)
.. .++.++|.+...+ ...+++.+ +....|++. .+++.+....+ ........+|+|+
T Consensus 91 ~g~~~~~~~~~~l~~~---------g~tl~v~~--~~~~~p~l~----------~l~~~~~~~~~~~~~~n~~~~~~~gp 149 (342)
T 1vrb_A 91 DRFLVSPAEALEWYEK---------GAALEFDF--TDLFIPQVR----------RWIEKLKAELRLPAGTSSKAIVYAAK 149 (342)
T ss_dssp -CEEECHHHHHHHHHT---------TCCEEECC--GGGTCTHHH----------HHHHHHHHHTTCCTTCCEEEEEEEEC
T ss_pred CCcccCHHHHHHHHhC---------CCeEEECC--hhHhChHHH----------HHHHhhhhhcCCcccccccceEEEeC
Confidence 23 6788888776542 23356555 233445432 11111111001 0011134599999
Q ss_pred CCCcccccccccCccceeEEEEeEEEEEEe-CCCCCcccccCC-C---CccccCCCcccCCCCC---CceEEEEEcCCCE
Q psy12281 238 KETWTPLHADVFHSYSWSVNICGRKQWLLL-APGNEKYFKDSM-G---NLISDMRSVDWSTLPR---DTVIIVEQEAGDS 309 (456)
Q Consensus 238 ~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~-pP~~~~~Ly~~~-g---~~p~d~~~pd~~~fp~---~~~~~~~l~pGD~ 309 (456)
+|++|++|+|.++|+ .+||.|+|+|+|| ||.+...+|+.. + ..|.|+..++.++||. ++.++++|+|||+
T Consensus 150 ~g~~~~~H~D~~dnf--l~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~ 227 (342)
T 1vrb_A 150 NGGGFKAHFDAYTNL--IFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTM 227 (342)
T ss_dssp SSCCCCSEECSSEEE--EEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCE
T ss_pred CCCCCCCeECChhcE--EEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcE
Confidence 999999999999988 9999999999999 898777777521 1 1244455566666764 7889999999999
Q ss_pred EEeCCCCeEEEEeCC--CcEEEEee
Q psy12281 310 IFVPSGWHHQVTNLE--HTISINHN 332 (456)
Q Consensus 310 LfIPsgW~H~V~nl~--~sIsvn~~ 332 (456)
||||+||||+|.+++ .|++|+.+
T Consensus 228 LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 228 LYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp EEECTTCEEEEECSSCEEEEEEEEC
T ss_pred EEeCCCccEEEEECCCCceEEEEEC
Confidence 999999999999994 48888877
No 13
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=99.86 E-value=2.9e-22 Score=160.25 Aligned_cols=65 Identities=69% Similarity=1.280 Sum_probs=61.5
Q ss_pred CceeeeEEeCCCccccCCCceEEEecCCCCcEEeehhhhhcCCcEEeCCCCcceEEEeeeehhhh
Q psy12281 1 MSVYHDEIEIEDFEYDEDDETYYYPCPCGDRFQITKEQLKAGEDVATCPTCSLIIKPSVIKSVML 65 (456)
Q Consensus 1 ~~~~~~~~~l~d~~~~~~~~~~~~~CrCg~~f~i~~~~l~~~~~~~~C~~CSl~i~~~~~~~~~~ 65 (456)
|+.||++|+|+||+++++++.|+|+|||||.|.|++++|++|+.+++|+||||+|+|.|...+..
T Consensus 1 m~~vydeV~LeDm~~de~~~~y~ypCrCGd~F~IteedLe~ge~iv~C~sCSL~IkV~y~~~~~~ 65 (89)
T 2jr7_A 1 MAVFHDEVEIEDFQYDEDSETYFYPCPCGDNFSITKEDLENGEDVATCPSCSLIIKVIYDKDQFV 65 (89)
T ss_dssp CCSCSCEEETTTSEEETTTTEEEEECTTSSEEEEEHHHHHHTCCEEECTTTCCEEEEECCHHHHC
T ss_pred CCcceeEEEHHHcEEcCCCCEEEEcCCCCCEEEECHHHHhCCCEEEECCCCccEEEEEEcccccc
Confidence 78899999999999999999999999999999999999999999999999999999999766653
No 14
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=99.85 E-value=7.5e-22 Score=156.36 Aligned_cols=65 Identities=69% Similarity=1.283 Sum_probs=61.4
Q ss_pred CceeeeEEeCCCccccCCCceEEEecCCCCcEEeehhhhhcCCcEEeCCCCcceEEEeeeehhhh
Q psy12281 1 MSVYHDEIEIEDFEYDEDDETYYYPCPCGDRFQITKEQLKAGEDVATCPTCSLIIKPSVIKSVML 65 (456)
Q Consensus 1 ~~~~~~~~~l~d~~~~~~~~~~~~~CrCg~~f~i~~~~l~~~~~~~~C~~CSl~i~~~~~~~~~~ 65 (456)
|+.|+++|+|+||+++++++.|+|+|||||.|.|++++|++|+.+++|++|||+|+|.|...+..
T Consensus 8 m~~~~dev~LeDm~~de~~~~y~y~CrCGd~F~it~edL~~ge~iv~C~sCSL~I~V~~~~~~~~ 72 (83)
T 1wge_A 8 MAVFHDEVEIEDFQYDEDSETYFYPCPCGDNFAITKEDLENGEDVATCPSCSLIIKVIYDKDQFM 72 (83)
T ss_dssp CCCCSCEEEGGGSCCBTTTTEEEECCSSSSCEEEEHHHHHTTCCEEECTTTCCEEEEECCHHHHH
T ss_pred cceeeEEEEHHHceEccCCCEEEEeCCCCCEEEECHHHHhCCCEEEECCCCceEEEEEecccccc
Confidence 67899999999999999999999999999999999999999999999999999999999776654
No 15
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=99.84 E-value=7e-22 Score=156.54 Aligned_cols=65 Identities=46% Similarity=0.903 Sum_probs=60.9
Q ss_pred CceeeeEEeCCCccccCCCceEEEecCCCCcEEeehhhhhcCCcEEeCCCCcceEEEeeeehhhhh
Q psy12281 1 MSVYHDEIEIEDFEYDEDDETYYYPCPCGDRFQITKEQLKAGEDVATCPTCSLIIKPSVIKSVMLM 66 (456)
Q Consensus 1 ~~~~~~~~~l~d~~~~~~~~~~~~~CrCg~~f~i~~~~l~~~~~~~~C~~CSl~i~~~~~~~~~~~ 66 (456)
|+ ||++|+|+||+++++++.|+|+|||||.|.|++++|++|+.+++|+||||+|+|.|...+..-
T Consensus 2 ~~-~~dev~leDm~~de~~~~y~ypCrCGd~F~it~edL~~ge~iv~C~sCSL~I~V~~~~~d~~~ 66 (83)
T 1yop_A 2 VS-TYDEIEIEDMTFEPENQMFTYPCPCGDRFQIYLDDMFEGEKVAVCPSCSLMIDVVFDKEDLAE 66 (83)
T ss_dssp CS-CSBCCBGGGSEEETTTTEEEEEETTTEEEEEEHHHHHTTCCEEECSSSCCEEECBCCSSHHHH
T ss_pred cc-eeeEEEHHHcEEcCCCCEEEEeCCCCCeEEECHHHHhCCCEEEECCCCccEEEEEEccccccc
Confidence 44 899999999999999999999999999999999999999999999999999999998877654
No 16
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=99.80 E-value=5.6e-20 Score=190.78 Aligned_cols=204 Identities=14% Similarity=0.098 Sum_probs=111.6
Q ss_pred CCCCHHHHHHhhcCCCCcEEEecCCCc-cccccccccCCCCChhHHHHHhCCceEEEEecCcccccCCceEE-eeHHHH-
Q psy12281 93 PSHIYPYCFNNFLSKNKPFILKSCVNE-WNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTN-MTLKEY- 169 (456)
Q Consensus 93 ~~ls~~~F~~~y~~~~~PvVi~g~~~~-Wpa~~~Wt~~~~~~~d~L~~~~Gd~~V~V~~~~~~~y~~~~~~~-m~l~ef- 169 (456)
..+|.++|+++|+ .++|++|++...+ |++++.+- ++++|.+..+...+...+-+...|.++.... ++-+.+
T Consensus 24 ~~is~e~F~~~yw-~kkPllIr~~~~~~~~~f~~l~-----s~~~L~~La~~~~v~~~~v~~~r~~~g~~~~~~~~g~~~ 97 (442)
T 2xdv_A 24 SPIKTETFFKEFW-EQKPLLIQRDDPALATYYGSLF-----KLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAH 97 (442)
T ss_dssp TTSCHHHHHHHTT-TTSCEEECCCCHHHHHHHHHHC-----CHHHHSSCC------------------------------
T ss_pred cCCCHHHHHHHhh-hhCcEEeecCCcchhhhhcCcC-----CHHHHHHHHccCcccccccceeeecCCcceeecCCCccC
Confidence 4799999999999 5799999988754 99886442 4788887665433321110000011110000 000000
Q ss_pred -HHHHHhcccCCCCCCCCeeeeeccccccCCCCCcccccCcccCcchhhHhhhhhccCCCccceeeeCCCCCcc-ccccc
Q psy12281 170 -TIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGPKETWT-PLHAD 247 (456)
Q Consensus 170 -l~~~~~~~~~~~~~~~~~~Yl~d~~~~~~~p~l~~y~~P~~f~~D~ln~~~~~~~~~~~~~~~l~iG~~gs~T-~lH~D 247 (456)
-+.++...+ ....+-+. ...+..|.+. .+ .+.+..+. + .....++|+|++|+.+ ++|+|
T Consensus 98 ~~~l~~~~~~-----~g~tL~l~--~~~~~~p~L~------~l-~~~l~~~~---g--~~~~~n~y~~~~g~~g~~~H~D 158 (442)
T 2xdv_A 98 FLQLRKDFDQ-----KRATIQFH--QPQRFKDELW------RI-QEKLECYF---G--SLVGSNVYITPAGSQGLPPHYD 158 (442)
T ss_dssp -----CCEEE-----ETTEEEEE--CGGGTCHHHH------HH-HHHHHHHH---T--SCCEEEEEEECTTCBCSCSEEC
T ss_pred HHHHHHHhcc-----CCcEEEeC--chhhhhhHHH------HH-HHHHHHHh---C--CCcccceEECCCCCCCccceEC
Confidence 000000000 00011111 0111111110 00 11122221 2 4556789999999876 89999
Q ss_pred ccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCeEEEEeCCC--
Q psy12281 248 VFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTNLEH-- 325 (456)
Q Consensus 248 ~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~H~V~nl~~-- 325 (456)
.++++ .+|+.|+|+|+|+||.+. +.. ...+| .++ ++ ..+.++++|+|||+||||+||||+|.+++.
T Consensus 159 ~~dvf--~~Qv~G~Krw~l~~p~~p--l~~---~~s~d--~~~--~~-~~~~~~~~L~pGD~LYiP~g~~H~~~s~~~~~ 226 (442)
T 2xdv_A 159 DVEVF--ILQLEGEKHWRLYHPTVP--LAR---EYSVE--AEE--RI-GRPVHEFMLKPGDLLYFPRGTIHQADTPAGLA 226 (442)
T ss_dssp SSEEE--EEEEESCEEEEEECCSST--TCS---SCEEC--CTT--TS-CSCSEEEEECTTCEEEECTTCEEEEECCSSSC
T ss_pred CcceE--EEEEEeEEEEEEccCCCC--ccc---cCCCC--chh--hc-CCcceEEEECCCcEEEECCCceEEEEecCCCc
Confidence 99998 999999999999999862 111 11122 111 12 256799999999999999999999999863
Q ss_pred -cEEEEeec
Q psy12281 326 -TISINHNW 333 (456)
Q Consensus 326 -sIsvn~~~ 333 (456)
|+.++..-
T Consensus 227 ~SlhlT~~~ 235 (442)
T 2xdv_A 227 HSTHVTIST 235 (442)
T ss_dssp CEEEEEEEE
T ss_pred ceeeccccc
Confidence 56666554
No 17
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=99.76 E-value=3.1e-17 Score=170.08 Aligned_cols=102 Identities=19% Similarity=0.303 Sum_probs=78.7
Q ss_pred CCccceeeeCCCCCc-ccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEc
Q psy12281 227 KDDYRFVYMGPKETW-TPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQE 305 (456)
Q Consensus 227 ~~~~~~l~iG~~gs~-T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~ 305 (456)
.....++|++++|+. .++|+|.++++ .+||.|+|+|+|++|.....+++.... .++..++ ...+.++++|+
T Consensus 162 ~~v~~N~Y~tp~Gs~g~~pH~D~~DvF--llQv~G~KrWrL~~P~~~~~~lp~~~~--~~~~~~~----~~~p~~e~~L~ 233 (489)
T 4diq_A 162 SMAGSNVYLTPPNSQGFAPHYDDIEAF--VLQLEGRKLWRVYRPRAPTEELALTSS--PNFSQDD----LGEPVLQTVLE 233 (489)
T ss_dssp SCEEEEEEEECSSBCCSCCBCCSSEEE--EEEEEECEEEEEECCSSGGGTTCSSCC--CCCCGGG----CCCCSEEEEEC
T ss_pred CcccceEEecCCCcccccCccCCcceE--EEEEeeEEEEEEeCCCCccccCCCccc--ccCCccc----ccCcceEEEEC
Confidence 345567999999985 48999999998 999999999999999887654432110 1111111 12678999999
Q ss_pred CCCEEEeCCCCeEEEEeCCC--cEEEEeecCCC
Q psy12281 306 AGDSIFVPSGWHHQVTNLEH--TISINHNWING 336 (456)
Q Consensus 306 pGD~LfIPsgW~H~V~nl~~--sIsvn~~~~~~ 336 (456)
|||+||||+||||+|.++++ |+++++.....
T Consensus 234 pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~ 266 (489)
T 4diq_A 234 PGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQR 266 (489)
T ss_dssp TTCEEEECTTCEEEEEBCSSCCEEEEEEEECTT
T ss_pred CCCEEEECCCCceEEEecCCCceEEEeecccCc
Confidence 99999999999999999975 78888777643
No 18
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=99.72 E-value=3.1e-18 Score=170.69 Aligned_cols=240 Identities=18% Similarity=0.219 Sum_probs=148.4
Q ss_pred HHHHHHhhcCCCCcEEEecCCCccccccccccCCCCChhHHHHHhCCceEEEEecCcccccCCceEEeeHHHHHHHHHhc
Q psy12281 97 YPYCFNNFLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKEYTIYWQNK 176 (456)
Q Consensus 97 ~~~F~~~y~~~~~PvVi~g~~~~Wpa~~~Wt~~~~~~~d~L~~~~Gd~~V~V~~~~~~~y~~~~~~~m~l~efl~~~~~~ 176 (456)
...| ++++.+++||||+|....... ..|+ +++|.+.||+..+.+.+|.. .....+++++|++-+...
T Consensus 24 ~~~F-q~hW~~GePViVs~V~~~~~~-~~W~------Pe~~~~~~gd~~~~lidC~~-----~~~~~i~v~~Ff~Gf~~~ 90 (392)
T 2ypd_A 24 WKLF-KECWKQGQPAVVSGVHKKMNI-SLWK------AESISLDFGDHQADLLNCKD-----SIISNANVKEFWDGFEEV 90 (392)
T ss_dssp HHHH-HHHHTTTCCEEECCHHHHSCG-GGGS------HHHHHHHHTTSCCCCEETTT-----CCBCSCCHHHHHHTSSBG
T ss_pred HHHH-HHHHhCCCcEEEechhhhCcC-CccC------HHHHHHHhcCceeeeeeCCC-----CccccCcHHHHhhhcccc
Confidence 4567 566779999999987654332 4685 79999999999988888852 345678999999976543
Q ss_pred ccCC--CCCCCCeeeeeccccccC----CCC----C-cccccCcccCcc-hhhHhhhhhcc--CCC-ccceeee--CC--
Q psy12281 177 IDGK--LSETEPLYYLKDWHFTRD----FKT----E-DIYRVPNVFSSD-WLNEYYSEHLE--HKD-DYRFVYM--GP-- 237 (456)
Q Consensus 177 ~~~~--~~~~~~~~Yl~d~~~~~~----~p~----l-~~y~~P~~f~~D-~ln~~~~~~~~--~~~-~~~~l~i--G~-- 237 (456)
.... .......+.||||+-... +|. + ....+|.|...+ .|| +....+. ..+ --.-+|+ |.
T Consensus 91 ~~r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p~G~LN-LAs~LP~~~~kPDLGPK~YiAYG~~~ 169 (392)
T 2ypd_A 91 SKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPEGKFN-LASHLPGFFVRPDLGPRLCSAYGVVA 169 (392)
T ss_dssp GGC------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHSTTCTTC-CTTTSCGGGCC---CCEEEEECCSTT
T ss_pred ccCCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCCCccch-HHHhCCCCCCCCCCCcchhhhcCcch
Confidence 2110 012345688999985543 332 1 112222222222 122 0000000 011 1123444 21
Q ss_pred ----CCCcccccccccCccceeEEEE------------------------------------eEEEEEEeCCCCCccccc
Q psy12281 238 ----KETWTPLHADVFHSYSWSVNIC------------------------------------GRKQWLLLAPGNEKYFKD 277 (456)
Q Consensus 238 ----~gs~T~lH~D~~~~~sW~~~i~------------------------------------G~Krw~L~pP~~~~~Ly~ 277 (456)
..+.|.||.|+.+..+-.+-+. |--.|-+|.+.+.+.|+.
T Consensus 170 ~~~~~~gvT~LH~DmsDaVNiL~h~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~r~~~~~~~~GAlW~Ifr~~D~~klr~ 249 (392)
T 2ypd_A 170 AKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIRE 249 (392)
T ss_dssp TTCTTCCSEEEEECSSEEEEEEEEEECCBCTTCCCHHHHHHHHHTSCCCHHHHHHHTCTTCCEEEEEEEECGGGHHHHHH
T ss_pred hcccCCCcceeeeehhhhhhhhheecccCccccchhhhhhhhhhhccccHHHhhhccCCCCCCCceeeeeCHhhHHHHHH
Confidence 2346999999999873333322 235788888888776654
Q ss_pred CC-------CCccc-cCCCcccC-C-C----------C--CCceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecCC
Q psy12281 278 SM-------GNLIS-DMRSVDWS-T-L----------P--RDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWIN 335 (456)
Q Consensus 278 ~~-------g~~p~-d~~~pd~~-~-f----------p--~~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~ 335 (456)
.. |. +. ....|--+ . | . ..++++++|.+||+||||+||+|||.|+.+||+|+.+|++
T Consensus 250 ~L~~~~~e~~~-~~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~s 328 (392)
T 2ypd_A 250 FLQKISKEQGL-EVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVS 328 (392)
T ss_dssp HHHHHHHHHC-------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECC
T ss_pred HHHHHHHhhCC-CccCCCCcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcC
Confidence 31 10 10 01111111 1 1 1 2799999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHH
Q psy12281 336 GTNIDHVYHEMVSHLE 351 (456)
Q Consensus 336 ~~nl~~~~~~l~~~~~ 351 (456)
+.|+..+++.....+.
T Consensus 329 pe~~~~c~~lt~E~R~ 344 (392)
T 2ypd_A 329 PEHLVESFHLTQELRL 344 (392)
T ss_dssp GGGHHHHHHHHHHC--
T ss_pred hhhHHHHHHHHHHHhh
Confidence 9999999987664443
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.30 E-value=2e-12 Score=115.79 Aligned_cols=57 Identities=26% Similarity=0.713 Sum_probs=53.0
Q ss_pred eeeeEEeCCCccccCCCceEEEecCCCCcEEeehhhhhcCCcEEeCCCCcceEEEeee
Q psy12281 3 VYHDEIEIEDFEYDEDDETYYYPCPCGDRFQITKEQLKAGEDVATCPTCSLIIKPSVI 60 (456)
Q Consensus 3 ~~~~~~~l~d~~~~~~~~~~~~~CrCg~~f~i~~~~l~~~~~~~~C~~CSl~i~~~~~ 60 (456)
.+..++.+++|+++++.++|+|+||||+.|.+++++|++| .+|+|++|||+|+|.|.
T Consensus 92 ~~~~~~~~~~m~~~e~~~~f~~~CrCG~~f~i~~~~l~~~-~~v~C~sCSl~~~v~~~ 148 (155)
T 2l6l_A 92 PVDAQVYLEEMSWNEGDHSFYLSCRCGGKYSVSKDEAEEV-SLISCDTCSLIIELLHY 148 (155)
T ss_dssp SSSEEEETTTSEEETTTTEEEEECSSSCEEEEETTHHHHC-CEEECSSSSCEEEEECC
T ss_pred cccceeeHHHhccccCCcEEEEcCCCCCeEEecHHHhCCC-CEEECCCCceEEEEEEc
Confidence 4567899999999999999999999999999999999987 79999999999999984
No 20
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=99.07 E-value=9.2e-10 Score=108.94 Aligned_cols=233 Identities=16% Similarity=0.205 Sum_probs=138.9
Q ss_pred CCCHHHHHHhhcCCCCc-EEEecCCC--ccccccccccCCCCChhHHHHHhCCceEEEEecCc----cccc---------
Q psy12281 94 SHIYPYCFNNFLSKNKP-FILKSCVN--EWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNS----YYFN--------- 157 (456)
Q Consensus 94 ~ls~~~F~~~y~~~~~P-vVi~g~~~--~Wpa~~~Wt~~~~~~~d~L~~~~Gd~~V~V~~~~~----~~y~--------- 157 (456)
..|+. +.+-+..++.| +||||+.. .+.. ..+ +.+.|.+..|+..|.|..+.. ..++
T Consensus 23 a~s~~-l~~~~~~~~~pi~vIrgl~~~l~ld~-~lF------s~~~L~~~~~~~~i~vr~Q~~q~~~~N~~~~~~~~~W~ 94 (332)
T 2xxz_A 23 AFSPV-LLQFCTDPRNPITVIRGLAGSLRLNL-GLF------STKTLVEASGEHTVEVRTQVQQPSDENWDLTGTRQIWP 94 (332)
T ss_dssp TSSHH-HHHHHHCTTCSEEEEESHHHHHTCCG-GGG------SHHHHHHHHTTCEEEEEEEECCCTTCCBCTTSSSBCSB
T ss_pred hcCHH-HHHHhcCCCCCeEEEcchhhhhCcCh-hhC------CHHHHHHhCCCCeeeeeecCCCCCcccccCCCCccccc
Confidence 34443 33334456889 89998763 2322 234 468999999999998864321 1111
Q ss_pred -CCceEEeeHHHHHHHHHhcccCCCCCCCC---------------------------ee-eeecccccc--CCC-CC-cc
Q psy12281 158 -AHEKTNMTLKEYTIYWQNKIDGKLSETEP---------------------------LY-YLKDWHFTR--DFK-TE-DI 204 (456)
Q Consensus 158 -~~~~~~m~l~efl~~~~~~~~~~~~~~~~---------------------------~~-Yl~d~~~~~--~~p-~l-~~ 204 (456)
...+..+|+++|.+|..+.-+........ .+ |-...++.. .+. .+ ..
T Consensus 95 ~~~~~~~~ti~kya~yq~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fgtNiDL~~~~~w~~q~~el 174 (332)
T 2xxz_A 95 CESSRSHTTIAKYAQYQASSFQESLQEEKESEDEESEEPDSTTGTPPSSAPDPKNHHIIKFGTNIDLSDAKRWKPQLQEL 174 (332)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHTTCSCC---------------------------CCEEEEEEEEECCCHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHHHHHhhhhhhccchhcccccccccccccccccccceeeeeecccCCchhhhHHHHHHH
Confidence 11267899999999876332110000000 00 000000000 000 00 01
Q ss_pred cccCcccC----cchhhHhhhhhccCCCccceeeeCCCCCcccccccccCccceeEEEE-eEEEEEEeCCCCCcccccC-
Q psy12281 205 YRVPNVFS----SDWLNEYYSEHLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNIC-GRKQWLLLAPGNEKYFKDS- 278 (456)
Q Consensus 205 y~~P~~f~----~D~ln~~~~~~~~~~~~~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~-G~Krw~L~pP~~~~~Ly~~- 278 (456)
-.+|.++. .+.|+ +.+. ....-...++|||..||+|++|.+....+|-+.++. |.|.|+-+|++....+...
T Consensus 175 ~kLP~~lr~~~~gslL~-~~~~-~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~e~l~ 252 (332)
T 2xxz_A 175 LKLPAFMRVTSTGNMLS-HVGH-TILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFC 252 (332)
T ss_dssp TTSCGGGCTTTTCCCSE-ETTE-ECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHH
T ss_pred hhCcHhhcccCccchhh-hcCC-cCCCcChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHHHHHHHH
Confidence 13444433 22222 1110 012446689999999999999999999887787777 6799999999876544321
Q ss_pred --CCCccccCCCccc----CCC--CCCceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecCCCCCH
Q psy12281 279 --MGNLISDMRSVDW----STL--PRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNI 339 (456)
Q Consensus 279 --~g~~p~d~~~pd~----~~f--p~~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~~~nl 339 (456)
.| .|.....+ +.. +..+.+.++|+|||.|++++|-+|+|.|.+-|++++.|+.....+
T Consensus 253 ~k~~---~d~~~~~~~~~p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~ 318 (332)
T 2xxz_A 253 DRHG---VDYLTGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAY 318 (332)
T ss_dssp HHTT---CCTTTSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCTTG
T ss_pred HhcC---CchhhceecCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCCCcHH
Confidence 11 11111110 011 237899999999999999999999999999999999999887654
No 21
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=99.02 E-value=2.2e-08 Score=104.83 Aligned_cols=229 Identities=15% Similarity=0.165 Sum_probs=138.0
Q ss_pred HHhhcCCCCc-EEEecCCC--ccccccccccCCCCChhHHHHHhCCceEEEEecC----cccccC----------CceEE
Q psy12281 101 FNNFLSKNKP-FILKSCVN--EWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCN----SYYFNA----------HEKTN 163 (456)
Q Consensus 101 ~~~y~~~~~P-vVi~g~~~--~Wpa~~~Wt~~~~~~~d~L~~~~Gd~~V~V~~~~----~~~y~~----------~~~~~ 163 (456)
.+.+..++.| +||||+.. .|.. ..+ +.+.|.+..|+..|.|.... ...++. ..+..
T Consensus 87 ~~~c~~~~~pi~vIrgl~~~l~ld~-~lF------s~~~L~~~~~~~~i~vr~Q~~q~~~~N~~~~~~~~~W~~~s~~~~ 159 (531)
T 3avr_A 87 HQFCTNPNNPVTVIRGLAGALKLDL-GLF------STKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWHCESNRSH 159 (531)
T ss_dssp HHHHHCTTCSEEEEETHHHHHTCCG-GGG------SHHHHHHHCTTCEEEEEEEECCCTTCCBCTTSSSBCSBCCEEEEE
T ss_pred HHHhcCCCCCeEEEccchhccCcCc-ccC------CHHHHHHhCCCCeeeeeecCCCCCCcCccccCCceeeeeccccCc
Confidence 3333456789 88998763 3322 234 36899999999999886421 111111 12567
Q ss_pred eeHHHHHHHHHhccc-CCCCCCCCee----------------------------eeecccccc--CCC-CC-cccccCcc
Q psy12281 164 MTLKEYTIYWQNKID-GKLSETEPLY----------------------------YLKDWHFTR--DFK-TE-DIYRVPNV 210 (456)
Q Consensus 164 m~l~efl~~~~~~~~-~~~~~~~~~~----------------------------Yl~d~~~~~--~~p-~l-~~y~~P~~ 210 (456)
+|+++|.+|....-+ .-........ |-.+.++.. .+. .+ ..-.+|.+
T Consensus 160 ~ti~kya~yq~~s~~e~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fgtNiDL~~~~~w~~ql~el~kLP~~ 239 (531)
T 3avr_A 160 TTIAKYAQYQASSFQESLREENEKRSHHKDHSDSESTSSDNSGRRRKGPFKTIKFGTNIDLSDDKKWKLQLHELTKLPAF 239 (531)
T ss_dssp EEHHHHHHHHHHHHHHTC------------------------------CCCEEEEEEEEECCCTTTTHHHHHHGGGSCGG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCcccccccchhccccCCCcccccccccCCCchhhhHHHHHHHHhCCHH
Confidence 999999998553110 0000000000 111111100 000 00 01235665
Q ss_pred cCc----chhhHhhhhhccCCCccceeeeCCCCCcccccccccCccceeEEEEe-EEEEEEeCCCCCcccccC---CCCc
Q psy12281 211 FSS----DWLNEYYSEHLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICG-RKQWLLLAPGNEKYFKDS---MGNL 282 (456)
Q Consensus 211 f~~----D~ln~~~~~~~~~~~~~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G-~Krw~L~pP~~~~~Ly~~---~g~~ 282 (456)
+.. +.|+...... ..-...++|||..||+|++|.+.....|-+.++.| .|.|+.+|++....+... .|.
T Consensus 240 lr~~~~gslL~~~~~~I--~Gvn~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~~k~e~l~~k~~~- 316 (531)
T 3avr_A 240 VRVVSAGNLLSHVGHTI--LGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYWGVLNDFCEKNNL- 316 (531)
T ss_dssp GCSSCTTCGGGGSCSCC--BTTSSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTC-
T ss_pred HcccCccchhhhcCCCC--CCcChhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHHHHHHHHHHHcCC-
Confidence 542 3333211111 24567899999999999999999998888888875 799999999886554321 121
Q ss_pred cccCCCcc----cCCC--CCCceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecCCCCCHHH
Q psy12281 283 ISDMRSVD----WSTL--PRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDH 341 (456)
Q Consensus 283 p~d~~~pd----~~~f--p~~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~~~nl~~ 341 (456)
|..... .+.. ...+.+.++|+|||.|++++|-+|+|.|.+-|++++.|+.....+..
T Consensus 317 --~~~~~~~~~~p~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~q~ 379 (531)
T 3avr_A 317 --NFLMGSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTACQY 379 (531)
T ss_dssp --CTTTSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCSSHHHH
T ss_pred --ChhhceeecCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeeeEEEeccCchHHH
Confidence 111110 0011 13788999999999999999999999999999999999998876553
No 22
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=98.62 E-value=3.6e-07 Score=94.28 Aligned_cols=109 Identities=21% Similarity=0.184 Sum_probs=83.1
Q ss_pred CCccceeeeCCCCCcccccccccCccceeEEEEe-EEEEEEeCCCCCcccccC---CCCccccCCCccc----CCC--CC
Q psy12281 227 KDDYRFVYMGPKETWTPLHADVFHSYSWSVNICG-RKQWLLLAPGNEKYFKDS---MGNLISDMRSVDW----STL--PR 296 (456)
Q Consensus 227 ~~~~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G-~Krw~L~pP~~~~~Ly~~---~g~~p~d~~~pd~----~~f--p~ 296 (456)
.-...++|||..||+|++|.+....+|-+.++.| .|.|+.+|+.....+... .|. |+....+ +.. +.
T Consensus 233 GVNtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~---d~l~~~~~pspe~L~kag 309 (510)
T 4ask_A 233 GMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGV---DYLTGSWWPILDDLYASN 309 (510)
T ss_dssp TTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTC---CTTTSCBCCCHHHHHHTT
T ss_pred CcChhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCc---chhhccccCCHHHHHhCC
Confidence 4566799999999999999999988877888855 799999999876543321 111 1111100 001 23
Q ss_pred CceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecCCCCC
Q psy12281 297 DTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTN 338 (456)
Q Consensus 297 ~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~~~n 338 (456)
.+.+.++|+|||.|++++|-+|+|.|.+-+++++.|+.....
T Consensus 310 IPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t~ 351 (510)
T 4ask_A 310 IPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTA 351 (510)
T ss_dssp CCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSSH
T ss_pred CCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEecCCCH
Confidence 789999999999999999999999999998888888887654
No 23
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=98.23 E-value=5e-07 Score=89.87 Aligned_cols=114 Identities=18% Similarity=0.153 Sum_probs=87.1
Q ss_pred CCccceeeeCCCCCcccccccccCccceeEEEEeE-EEEEEeCCCCCcccccCCCCc-ccc-CCCcccCC------C---
Q psy12281 227 KDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGR-KQWLLLAPGNEKYFKDSMGNL-ISD-MRSVDWST------L--- 294 (456)
Q Consensus 227 ~~~~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~-Krw~L~pP~~~~~Ly~~~g~~-p~d-~~~pd~~~------f--- 294 (456)
.-...++|+|..+|.+.+|.+-...+|.+.+..|. |.|..+|+.+...+....... |-. -..+++-. -
T Consensus 174 GVntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c~~fL~h~~~lisP~~ 253 (354)
T 3dxt_A 174 GVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTV 253 (354)
T ss_dssp CCCCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGCCEEECHHH
T ss_pred CccceeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHHHHHhCchhhhhcHHHHhcCcccCCHHH
Confidence 44567999999999999999999999999999998 999999999876443210000 000 00111111 0
Q ss_pred ---CCCceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecCCCCCHH
Q psy12281 295 ---PRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNID 340 (456)
Q Consensus 295 ---p~~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~~~nl~ 340 (456)
...+.+.++|+|||.|++-+|.||.+.|.+-+++.+.||....-++
T Consensus 254 L~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~ 302 (354)
T 3dxt_A 254 LKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWID 302 (354)
T ss_dssp HHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGHH
T ss_pred HHHCCCceEEEEeCCCcEEEECCCceEEEeeccccHhHhhccCcHHHHH
Confidence 1378999999999999999999999999999999999999876544
No 24
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=97.77 E-value=1.4e-05 Score=80.05 Aligned_cols=116 Identities=13% Similarity=0.078 Sum_probs=82.0
Q ss_pred CCccceeeeCCCCCcccccccccCccceeEEEEeE-EEEEEeCCCCCcccccCCC-CccccC-CCcccCC------C---
Q psy12281 227 KDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGR-KQWLLLAPGNEKYFKDSMG-NLISDM-RSVDWST------L--- 294 (456)
Q Consensus 227 ~~~~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~-Krw~L~pP~~~~~Ly~~~g-~~p~d~-~~pd~~~------f--- 294 (456)
.-...++|+|..+|.+++|.+-...+|-+.+..|. |.|..+|+.+...+..... .+|-.. ..+++-. -
T Consensus 217 GVntP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c~~fL~h~~~lisP~~ 296 (373)
T 3opt_A 217 GVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEEAKNCPEFLRHKMFLASPKL 296 (373)
T ss_dssp ---CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSHHHHSSCSSCTTTSCEEECHHH
T ss_pred CcchhheeeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhChhhhhhCHHHhhCCcccCCHHH
Confidence 34567899999999999999998888778887776 9999999998664432100 011000 0111111 0
Q ss_pred ---CCCceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecCCCCCHHHH
Q psy12281 295 ---PRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHV 342 (456)
Q Consensus 295 ---p~~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~~~nl~~~ 342 (456)
...+.+.++|+|||.|++=+|=||.+.|.+-+++.+.||....-+..-
T Consensus 297 L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g 347 (373)
T 3opt_A 297 LQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIG 347 (373)
T ss_dssp HHTTTCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC------
T ss_pred HHhcCCceEEEEECCCCEEEECCCceEEEEecCccHHHHHccCcHHHHHhh
Confidence 137899999999999999999999999999999999999988765543
No 25
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=97.68 E-value=3.6e-05 Score=77.51 Aligned_cols=114 Identities=18% Similarity=0.150 Sum_probs=84.7
Q ss_pred CCccceeeeCCCCCcccccccccCccceeEEEEe-EEEEEEeCCCCCcccccCCCC-ccccC-CCcccCC---C------
Q psy12281 227 KDDYRFVYMGPKETWTPLHADVFHSYSWSVNICG-RKQWLLLAPGNEKYFKDSMGN-LISDM-RSVDWST---L------ 294 (456)
Q Consensus 227 ~~~~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G-~Krw~L~pP~~~~~Ly~~~g~-~p~d~-~~pd~~~---f------ 294 (456)
.-...++|+|..+|.+.+|.+-...+|-+.+-.| .|.|+.+|+.+...+...... +|-.. ..+++-. +
T Consensus 192 GVn~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P~~~~~~~~~L~h~~~~isP~~ 271 (381)
T 2ox0_A 192 GVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLM 271 (381)
T ss_dssp TTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGSCEEECHHH
T ss_pred CcccceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHHHHhChhhhhcchHHhhccccccCHHH
Confidence 3456789999999999999999988877777667 699999999987654321000 01000 0111111 0
Q ss_pred ---CCCceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecCCCCCHH
Q psy12281 295 ---PRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNID 340 (456)
Q Consensus 295 ---p~~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~~~~nl~ 340 (456)
...+.+.++|+|||.|++=+|-||.+.|.+-+++.+.||....-+.
T Consensus 272 L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~~Wl~ 320 (381)
T 2ox0_A 272 LKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIE 320 (381)
T ss_dssp HHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCTTHHH
T ss_pred HHHCCCceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccCcHHHHH
Confidence 1378999999999999999999999999999999999998876544
No 26
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=95.94 E-value=0.027 Score=50.54 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=51.9
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|..|+.| |...+..+..++.|+=+-+.|.+.... + ...-+.++.|||+.+.|++.
T Consensus 77 ~PGq~S~iH-dH~~s~~~~~VL~G~l~e~~y~~~~~~-~---------------------~~~~~~~l~~G~~~~~~~~~ 133 (171)
T 3eqe_A 77 PPNKETTVH-DHGQSIGCAMVLEGKLLNSIYRSTGEH-A---------------------ELSNSYFVHEGECLISTKGL 133 (171)
T ss_dssp CTTCBCCEE-CCTTCEEEEEEEESEEEEEEEEECSSS-E---------------------EEEEEEEEETTCEEEECTTC
T ss_pred CCCCCcccc-cCCCceEEEEEEeeeEEEEEeecCCCc-e---------------------eecceEEeCCCcEEEeCCCC
Confidence 446679998 555566668899999887776532110 0 12346789999999999999
Q ss_pred eEEEEeCCC--cEEEEe
Q psy12281 317 HHQVTNLEH--TISINH 331 (456)
Q Consensus 317 ~H~V~nl~~--sIsvn~ 331 (456)
.|+|.|.++ +|||..
T Consensus 134 iH~V~N~~~~~aVSlHv 150 (171)
T 3eqe_A 134 IHKMSNPTSERMVSLHV 150 (171)
T ss_dssp EEEEECCSSSCEEEEEE
T ss_pred EEEEECCCCCCEEEEEE
Confidence 999999887 566554
No 27
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=95.45 E-value=0.019 Score=51.72 Aligned_cols=63 Identities=17% Similarity=0.190 Sum_probs=47.4
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV 312 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI 312 (456)
+-+-|.+ ..++| . .+..-|..++.|+=+..+..|+. ..+..+++||+++|
T Consensus 46 ~~l~pg~-~~~pH-h-~~a~E~~yVl~G~~~v~v~~~~~---------------------------~~~~~l~~GDv~~~ 95 (178)
T 1dgw_A 46 YCSKPNT-LLLPH-H-SDSDLLVLVLEGQAILVLVNPDG---------------------------RDTYKLDQGDAIKI 95 (178)
T ss_dssp EEECTTE-EEEEE-E-ESSEEEEEEEESEEEEEEEETTE---------------------------EEEEEEETTEEEEE
T ss_pred EEecCCc-EecCc-C-CCCCEEEEEEeEEEEEEEEeCCC---------------------------cEEEEECCCCEEEE
Confidence 4555544 46777 2 23345689999999998876542 12568999999999
Q ss_pred CCCCeEEEEeCCC
Q psy12281 313 PSGWHHQVTNLEH 325 (456)
Q Consensus 313 PsgW~H~V~nl~~ 325 (456)
|+|..|...|.++
T Consensus 96 P~g~~H~~~N~g~ 108 (178)
T 1dgw_A 96 QAGTPFYLINPDN 108 (178)
T ss_dssp CTTCCEEEEECCS
T ss_pred CCCCeEEEEeCCC
Confidence 9999999999875
No 28
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=95.20 E-value=0.059 Score=55.79 Aligned_cols=78 Identities=12% Similarity=0.001 Sum_probs=57.6
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.+ |+..++|+.+.. ..|..++.|+=+..++.+.. .+.+..++++||+++
T Consensus 326 ~v~l~p-G~~~~pH~Hp~A-~Ei~yV~~G~~~v~vv~~~g-------------------------~~~~~~~l~~GDv~v 378 (459)
T 2e9q_A 326 RGVLYS-NAMVAPHYTVNS-HSVMYATRGNARVQVVDNFG-------------------------QSVFDGEVREGQVLM 378 (459)
T ss_dssp EEEECT-TCEEEEEEESSC-CEEEEEEEEEEEEEEECTTS-------------------------CEEEEEEEETTCEEE
T ss_pred EEEeeC-CcCccceECCCC-CEEEEEEeeEEEEEEEeCCC-------------------------CEEEeeEEeCCcEEE
Confidence 355555 556999998865 47899999999999987653 134567899999999
Q ss_pred eCCCCeEEEEeCCCcEEEEeecCCC
Q psy12281 312 VPSGWHHQVTNLEHTISINHNWING 336 (456)
Q Consensus 312 IPsgW~H~V~nl~~sIsvn~~~~~~ 336 (456)
||.|+.|...|.++.+.+-.-+.+.
T Consensus 379 ~P~G~~H~~~ng~~~~~~l~~~~s~ 403 (459)
T 2e9q_A 379 IPQNFVVIKRASDRGFEWIAFKTND 403 (459)
T ss_dssp ECTTCEEEEEEEEEEEEEEEEESSS
T ss_pred ECCCCEEEEEeCCCCeEEEEEecCC
Confidence 9999999999954444443333333
No 29
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=95.07 E-value=0.08 Score=55.44 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=56.4
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.+ |+..++|+.+.. .-|..++.|+=++.+..+.- .+.+..+++|||+++
T Consensus 376 ~v~L~P-G~~~~pH~Hp~a-~Ei~yVl~G~~~v~vv~~~G-------------------------~~~~~~~l~~GDv~v 428 (510)
T 3c3v_A 376 YGNLYR-NALFVPHYNTNA-HSIIYALRGRAHVQVVDSNG-------------------------NRVYDEELQEGHVLV 428 (510)
T ss_dssp EEEEET-TCEEEEEEESSC-CEEEEEEESEEEEEEECTTS-------------------------CEEEEEEEETTCEEE
T ss_pred EEEecC-CceecceECCCC-CEEEEEEeCEEEEEEEeCCC-------------------------CEEEeEEEcCCcEEE
Confidence 345555 456999998854 35689999999998876531 134567899999999
Q ss_pred eCCCCeEEEEeCCCcEEEEeecCCC
Q psy12281 312 VPSGWHHQVTNLEHTISINHNWING 336 (456)
Q Consensus 312 IPsgW~H~V~nl~~sIsvn~~~~~~ 336 (456)
||+|+.|.+.|.++.+.+-.-+.+.
T Consensus 429 iP~G~~H~~~Ng~e~l~~l~f~~s~ 453 (510)
T 3c3v_A 429 VPQNFAVAGKSQSDNFEYVAFKTDS 453 (510)
T ss_dssp ECTTCEEEEEECSSEEEEEEEESSS
T ss_pred ECCCCeEEEEeCCCCEEEEEEECCC
Confidence 9999999999954555554434343
No 30
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=95.06 E-value=0.089 Score=54.89 Aligned_cols=71 Identities=20% Similarity=0.197 Sum_probs=56.1
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.+ |+..++|+.+..+ .|..++.|+=+..++.|.- .+.+..++++||+++
T Consensus 362 ~v~L~p-Ggm~~PHwHp~A~-Ei~yVl~G~~rv~~V~~~g-------------------------~~~f~~~l~~GDV~v 414 (496)
T 3ksc_A 362 HGSLHK-NAMFVPHYNLNAN-SIIYALKGRARLQVVNCNG-------------------------NTVFDGELEAGRALT 414 (496)
T ss_dssp EEEEET-TCEEEEEEESSCC-EEEEEEESEEEEEEECTTS-------------------------CEEEEEEEETTCEEE
T ss_pred EEEeeC-CeEECCeeCCCCC-EEEEEEeceEEEEEEeCCC-------------------------cEEEEEEecCCeEEE
Confidence 456666 4559999988754 7899999999999998752 134567899999999
Q ss_pred eCCCCeEEEEeCCCcEEE
Q psy12281 312 VPSGWHHQVTNLEHTISI 329 (456)
Q Consensus 312 IPsgW~H~V~nl~~sIsv 329 (456)
||.|+.|...|.++.+.+
T Consensus 415 ~P~G~~H~~~a~~e~~~~ 432 (496)
T 3ksc_A 415 VPQNYAVAAKSLSDRFSY 432 (496)
T ss_dssp ECTTCEEEEEECSSEEEE
T ss_pred ECCCCEEEEEeCCCCEEE
Confidence 999999998888665444
No 31
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=95.04 E-value=0.087 Score=54.80 Aligned_cols=79 Identities=14% Similarity=0.103 Sum_probs=57.1
Q ss_pred ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEE
Q psy12281 231 RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSI 310 (456)
Q Consensus 231 ~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~L 310 (456)
..+-+.+ |+..++|+.+.. .-|..++.|+=+..+..+.- .+.+..+++|||++
T Consensus 341 ~~v~l~p-Ga~~~pH~Hp~a-~Ei~yVl~G~~~v~v~~~~G-------------------------~~~~~~~l~~GDv~ 393 (476)
T 1fxz_A 341 EFGSLRK-NAMFVPHYNLNA-NSIIYALNGRALIQVVNCNG-------------------------ERVFDGELQEGRVL 393 (476)
T ss_dssp EEEEECT-TCEEEEEEETTC-CEEEEEEESEEEEEEECTTS-------------------------CEEEEEEEETTCEE
T ss_pred EEEEecC-CceecceECCCC-CEEEEEEeCEEEEEEEecCC-------------------------CEEeeeEEcCCCEE
Confidence 3455665 456999998854 35689999999998875531 23456789999999
Q ss_pred EeCCCCeEEEEeCCCcEEEEeecCCC
Q psy12281 311 FVPSGWHHQVTNLEHTISINHNWING 336 (456)
Q Consensus 311 fIPsgW~H~V~nl~~sIsvn~~~~~~ 336 (456)
+||+|+.|...|.++.+.+-.-+.+.
T Consensus 394 viP~G~~H~~~ng~~~l~~l~f~~s~ 419 (476)
T 1fxz_A 394 IVPQNFVVAARSQSDNFEYVSFKTND 419 (476)
T ss_dssp EECTTCEEEEEECSTTEEEEEEESSS
T ss_pred EECCCCeEEEEeCCCCEEEEEEECCC
Confidence 99999999999954555554434343
No 32
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=94.94 E-value=0.065 Score=56.07 Aligned_cols=72 Identities=14% Similarity=0.068 Sum_probs=54.7
Q ss_pred ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEE
Q psy12281 231 RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSI 310 (456)
Q Consensus 231 ~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~L 310 (456)
..+-+.+.+ ..++|+.+.. .-|..++.|+-+..++.+.- .+.++.++++||++
T Consensus 397 a~v~L~pGg-m~~PHwHp~A-~Ei~yVl~G~~rv~~V~~~G-------------------------~~v~~~~L~~GDV~ 449 (531)
T 3fz3_A 397 ERGFFYRNG-IYSPHWNVNA-HSVVYVIRGNARVQVVNENG-------------------------DAILDQEVQQGQLF 449 (531)
T ss_dssp EEEEECTTC-EEEEEEESSC-CEEEEEEEEEEEEEEECTTS-------------------------CEEEEEEEETTCEE
T ss_pred EEEEeecCc-cccceEcCCC-CEEEEEEeCcEEEEEEeCCC-------------------------cEEEEEEecCCeEE
Confidence 346667655 4789998864 36899999999999987642 13567899999999
Q ss_pred EeCCCCeEEEEeCCCcEEE
Q psy12281 311 FVPSGWHHQVTNLEHTISI 329 (456)
Q Consensus 311 fIPsgW~H~V~nl~~sIsv 329 (456)
+||.|+.|...+.++.+.+
T Consensus 450 v~P~G~~H~~~ag~e~l~f 468 (531)
T 3fz3_A 450 IVPQNHGVIQQAGNQGFEY 468 (531)
T ss_dssp EECTTCEEEEEEEEEEEEE
T ss_pred EECCCCeEEEecCCCCEEE
Confidence 9999999977665444444
No 33
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=94.69 E-value=0.11 Score=47.42 Aligned_cols=68 Identities=19% Similarity=0.227 Sum_probs=49.4
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV 312 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI 312 (456)
+-+.+. ...++|+.... .-+..++.|+=+..+..+... | .+.++.+++|||+++|
T Consensus 77 ~~l~pg-~~~~~H~H~~~-~E~~~Vl~G~~~v~~~~~~~~-------~----------------~~~~~~~l~~GD~~~i 131 (201)
T 1fi2_A 77 VDFAPG-GTNPPHIHPRA-TEIGMVMKGELLVGILGSLDS-------G----------------NKLYSRVVRAGETFVI 131 (201)
T ss_dssp EEECTT-CEEEEEECTTC-CEEEEEEESEEEEEEECCGGG-------T----------------TCEEEEEEETTCEEEE
T ss_pred EEECCC-CCCCCeECCCC-CEEEEEEeCEEEEEEEcCCCC-------C----------------CeEEEEEECCCCEEEE
Confidence 445554 45889988742 133889999988887644310 0 2345789999999999
Q ss_pred CCCCeEEEEeCCC
Q psy12281 313 PSGWHHQVTNLEH 325 (456)
Q Consensus 313 PsgW~H~V~nl~~ 325 (456)
|+|-+|...|.++
T Consensus 132 P~g~~H~~~N~g~ 144 (201)
T 1fi2_A 132 PRGLMHFQFNVGK 144 (201)
T ss_dssp CTTCCEEEEECSS
T ss_pred CCCCeEEEEeCCC
Confidence 9999999999876
No 34
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=94.60 E-value=0.13 Score=46.70 Aligned_cols=58 Identities=24% Similarity=0.381 Sum_probs=42.3
Q ss_pred cccccccc-CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCeEEE
Q psy12281 242 TPLHADVF-HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQV 320 (456)
Q Consensus 242 T~lH~D~~-~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~H~V 320 (456)
++.|+... +..-...++.|+=.+.+-... .+.....++|||+++||+|.+|..
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~--------------------------g~~~~~~l~~GD~v~ip~g~~H~~ 139 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPE--------------------------GDAKWISMEPGTVVYVPPYWAHRT 139 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTT--------------------------CCEEEEEECTTCEEEECTTCEEEE
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcC--------------------------CcEEEEEECCCcEEEECCCCeEEE
Confidence 67787653 222337788888777663110 235678999999999999999999
Q ss_pred EeCCC
Q psy12281 321 TNLEH 325 (456)
Q Consensus 321 ~nl~~ 325 (456)
.|.++
T Consensus 140 ~N~g~ 144 (190)
T 1x82_A 140 VNIGD 144 (190)
T ss_dssp EECSS
T ss_pred EECCc
Confidence 99876
No 35
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=94.46 E-value=0.19 Score=46.15 Aligned_cols=75 Identities=15% Similarity=0.076 Sum_probs=53.0
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe-CCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV-PSG 315 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI-Psg 315 (456)
++|..||.| |..++..|..++.|.=+-..|-..... .. +-...-+.++.|||+.|+ |.+
T Consensus 78 ~PGq~SpiH-DH~~s~g~i~VL~G~l~e~~y~~~~~~-------~~------------~l~~~~~~~l~~G~v~~~~~~~ 137 (200)
T 3eln_A 78 GEGHGSSIH-DHTDSHCFLKLLQGNLKETLFDWPDKK-------SN------------EMIKKSERTLRENQCAYINDSI 137 (200)
T ss_dssp CTTCBCCEE-CCTTCEEEEEEEESCEEEEEECCCCSS-------CC------------CCCEEEEEEECTTCEEEECTTT
T ss_pred CCCCcCCCc-cCCCceEEEEEEeeeEEEEEeecCCCC-------cc------------cccccceEEeCCCCEEEecCCC
Confidence 456779999 555567778999999887777432110 00 012345789999999999 777
Q ss_pred CeEEEEeCC-C--cEEEEe
Q psy12281 316 WHHQVTNLE-H--TISINH 331 (456)
Q Consensus 316 W~H~V~nl~-~--sIsvn~ 331 (456)
=.|+|.|.+ + +|||..
T Consensus 138 giH~V~N~s~~~~avSlHv 156 (200)
T 3eln_A 138 GLHRVENVSHTEPAVSLHL 156 (200)
T ss_dssp CEEEEECCCSSCCEEEEEE
T ss_pred cEEEEECCCCCCCEEEEEe
Confidence 799999987 3 666664
No 36
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=94.31 E-value=0.16 Score=52.49 Aligned_cols=68 Identities=9% Similarity=0.022 Sum_probs=52.9
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.+ |+..++|+.+..+ .|..++.|+=+..++.|.- .+.+..++++||+++
T Consensus 327 ~v~L~p-Ggm~~PHwHp~A~-Ei~yVl~G~~rv~~V~~~g-------------------------~~~f~~~l~~GDV~v 379 (466)
T 3kgl_A 327 RGSIRQ-NAMVLPQWNANAN-AVLYVTDGEAHVQVVNDNG-------------------------DRVFDGQVSQGQLLS 379 (466)
T ss_dssp EEEEET-TEEEEEEEESSCC-EEEEEEESEEEEEEECTTS-------------------------CEEEEEEEETTCEEE
T ss_pred EEEeec-CcEeeeeECCCCC-EEEEEEeceEEEEEEeCCC-------------------------cEEEEeEecCCcEEE
Confidence 355665 4569999988754 6899999999999998752 134678899999999
Q ss_pred eCCCCeEEEEeCCCc
Q psy12281 312 VPSGWHHQVTNLEHT 326 (456)
Q Consensus 312 IPsgW~H~V~nl~~s 326 (456)
||.|+.|...+-.+.
T Consensus 380 ~P~G~~H~~~ag~e~ 394 (466)
T 3kgl_A 380 IPQGFSVVKRATSEQ 394 (466)
T ss_dssp ECTTCEEEEEECSSE
T ss_pred ECCCCeEEEEcCCCC
Confidence 999999988554443
No 37
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=94.25 E-value=0.11 Score=51.51 Aligned_cols=75 Identities=17% Similarity=0.271 Sum_probs=50.9
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC-C---C
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA-G---D 308 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p-G---D 308 (456)
+..-..|+...+|+... +.-+...|.|+=++.|..+... +. ..+++ | +
T Consensus 276 ls~~~~g~~rg~h~h~~-~~e~~~~~~G~~~~~~~~~~~~-------------------------~~--~~~~~~~~~~~ 327 (369)
T 3st7_A 276 VNISKPGITKGNHWHHT-KNEKFLVVSGKGVIRFRHVNDD-------------------------EI--IEYYVSGDKLE 327 (369)
T ss_dssp EEEECTTCEEEEEECSS-CCEEEEEEESEEEEEEEETTCC-------------------------CC--EEEEEETTBCC
T ss_pred EEEecCCceeccccccC-cceEEEEEeeeEEEEEEcCCCC-------------------------cE--EEEEecCCcce
Confidence 34445677788888764 4456888999988888644321 12 33333 6 9
Q ss_pred EEEeCCCCeEEEEeCCCcEEEEeecCC
Q psy12281 309 SIFVPSGWHHQVTNLEHTISINHNWIN 335 (456)
Q Consensus 309 ~LfIPsgW~H~V~nl~~sIsvn~~~~~ 335 (456)
+||||+||||...|+++.-.+-..|.+
T Consensus 328 ~~~ip~g~~h~~~n~~~~~~~~~~~~~ 354 (369)
T 3st7_A 328 VVDIPVGYTHNIENLGDTDMVTIMWVN 354 (369)
T ss_dssp EEEECTTEEEEEEECSSSCEEEEEEES
T ss_pred EEEeCCCceEEeEEcCCCcEEEEEecC
Confidence 999999999999999953334444444
No 38
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=94.24 E-value=0.13 Score=41.83 Aligned_cols=62 Identities=26% Similarity=0.205 Sum_probs=45.8
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|...+.|.....-+ ..++.|+=...+ + .-+.++.|||+++||++-
T Consensus 42 ~pg~~~~~H~H~~~e~--~~vl~G~~~~~~---~----------------------------~~~~~l~~Gd~~~ip~~~ 88 (116)
T 2pfw_A 42 DKGAEGYVHAHRHSQV--SYVVEGEFHVNV---D----------------------------GVIKVLTAGDSFFVPPHV 88 (116)
T ss_dssp CTTEEEEEECCSSEEE--EEEEEECEEEEE---T----------------------------TEEEEECTTCEEEECTTC
T ss_pred CCCCcCCcEECCcceE--EEEEeeEEEEEE---C----------------------------CEEEEeCCCCEEEECcCC
Confidence 3445578888765544 778888866655 1 115789999999999999
Q ss_pred eEEEEeCCCcEEEEe
Q psy12281 317 HHQVTNLEHTISINH 331 (456)
Q Consensus 317 ~H~V~nl~~sIsvn~ 331 (456)
.|...|.+++..+..
T Consensus 89 ~H~~~~~~~~~~l~v 103 (116)
T 2pfw_A 89 DHGAVCPTGGILIDT 103 (116)
T ss_dssp CEEEEESSCEEEEEE
T ss_pred ceeeEeCCCcEEEEE
Confidence 999999988655444
No 39
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=94.21 E-value=0.15 Score=41.97 Aligned_cols=61 Identities=16% Similarity=0.116 Sum_probs=45.7
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|...+.|......+ ..++.|+=++.+ ..-+..++|||+++||++=
T Consensus 44 ~~G~~~~~H~H~~~e~--~~Vl~G~~~~~i-------------------------------~~~~~~l~~Gd~i~ip~~~ 90 (114)
T 3fjs_A 44 PAGKQVGSHSVAGPST--IQCLEGEVEIGV-------------------------------DGAQRRLHQGDLLYLGAGA 90 (114)
T ss_dssp CTTCEEEEECCSSCEE--EEEEESCEEEEE-------------------------------TTEEEEECTTEEEEECTTC
T ss_pred CCCCccCceeCCCcEE--EEEEECEEEEEE-------------------------------CCEEEEECCCCEEEECCCC
Confidence 4456688888776655 777888766554 0125789999999999999
Q ss_pred eEEEEeCCCcEEEE
Q psy12281 317 HHQVTNLEHTISIN 330 (456)
Q Consensus 317 ~H~V~nl~~sIsvn 330 (456)
.|.+.|.+++..+.
T Consensus 91 ~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 91 AHDVNAITNTSLLV 104 (114)
T ss_dssp CEEEEESSSEEEEE
T ss_pred cEEEEeCCCcEEEE
Confidence 99999998854433
No 40
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=94.17 E-value=0.034 Score=55.86 Aligned_cols=27 Identities=22% Similarity=0.192 Sum_probs=24.6
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEeCCCc
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTNLEHT 326 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~nl~~s 326 (456)
-++.+++||++++|+|.||+..|.++.
T Consensus 142 ~~~~~~~GD~v~iP~g~~H~~~N~gde 168 (368)
T 3nw4_A 142 DPVRMSRGDLLLTPGWCFHGHMNDTDQ 168 (368)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECSSS
T ss_pred EEEEEeCCCEEEECCCCcEEeEeCCCC
Confidence 478999999999999999999998774
No 41
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=94.13 E-value=0.12 Score=51.24 Aligned_cols=64 Identities=23% Similarity=0.504 Sum_probs=48.5
Q ss_pred eeeCCCCCcccccccc-cCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 233 VYMGPKETWTPLHADV-FHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~-~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
+.+-+ |...++|+.. .. -|..++.|+=++.+..++. +.....+++||++|
T Consensus 57 ~~l~p-g~~~~~H~H~~~~--E~~yVl~G~~~~~v~~~~g--------------------------~~~~~~l~~GD~~~ 107 (361)
T 2vqa_A 57 MSLEP-GAIRELHWHANAA--EWAYVMEGRTRITLTSPEG--------------------------KVEIADVDKGGLWY 107 (361)
T ss_dssp EEECT-TCEEEEEECTTCC--EEEEEEESEEEEEEECTTS--------------------------CEEEEEEETTEEEE
T ss_pred EEEcC-CCCCCceeCCCCC--EEEEEEEeEEEEEEEeCCC--------------------------cEEEEEEcCCCEEE
Confidence 44555 4456788776 44 4589999999999876642 12247899999999
Q ss_pred eCCCCeEEEEeCCC
Q psy12281 312 VPSGWHHQVTNLEH 325 (456)
Q Consensus 312 IPsgW~H~V~nl~~ 325 (456)
||+|.+|...|.++
T Consensus 108 ip~g~~H~~~n~~~ 121 (361)
T 2vqa_A 108 FPRGWGHSIEGIGP 121 (361)
T ss_dssp ECTTCEEEEEECSS
T ss_pred ECCCCeEEEEeCCC
Confidence 99999999999974
No 42
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=94.07 E-value=0.022 Score=46.11 Aligned_cols=26 Identities=23% Similarity=0.299 Sum_probs=23.6
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
.+..+.+||.+|||.|-+|++.|.++
T Consensus 59 ~~~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 59 SLAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp ECCCBCTTCCEEECTTCEEEEBCCSS
T ss_pred EEEEecCCcEEEEcCCCcEECEECCC
Confidence 45678999999999999999999987
No 43
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=94.04 E-value=0.13 Score=42.56 Aligned_cols=62 Identities=18% Similarity=0.254 Sum_probs=46.9
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|..++.|.....-+ ..++.|+=++.+ + .-+..+.|||+++||+|=
T Consensus 49 ~pg~~~~~H~H~~~e~--~~vl~G~~~~~~---~----------------------------~~~~~l~~Gd~~~ip~~~ 95 (126)
T 4e2g_A 49 EPNTEMPAHEHPHEQA--GVMLEGTLELTI---G----------------------------EETRVLRPGMAYTIPGGV 95 (126)
T ss_dssp CTTCEEEEECCSSEEE--EEEEEECEEEEE---T----------------------------TEEEEECTTEEEEECTTC
T ss_pred CCCCcCCCccCCCceE--EEEEEeEEEEEE---C----------------------------CEEEEeCCCCEEEECCCC
Confidence 3455578898876554 788898876655 0 124789999999999999
Q ss_pred eEEEEeCCC-cEEEEe
Q psy12281 317 HHQVTNLEH-TISINH 331 (456)
Q Consensus 317 ~H~V~nl~~-sIsvn~ 331 (456)
.|.+.|.++ +..+..
T Consensus 96 ~H~~~~~~~~~~~l~v 111 (126)
T 4e2g_A 96 RHRARTFEDGCLVLDI 111 (126)
T ss_dssp CEEEECCTTCEEEEEE
T ss_pred cEEeEECCCCEEEEEE
Confidence 999999988 554443
No 44
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=94.00 E-value=0.23 Score=40.28 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=45.0
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|...+.|......+ ..++.|+-...+ + .-+..+.|||+++||+|=
T Consensus 48 ~~g~~~~~H~H~~~e~--~~vl~G~~~~~~---~----------------------------~~~~~l~~Gd~~~ip~~~ 94 (115)
T 1yhf_A 48 DKGQEIGRHSSPGDAM--VTILSGLAEITI---D----------------------------QETYRVAEGQTIVMPAGI 94 (115)
T ss_dssp CTTCEEEEECCSSEEE--EEEEESEEEEEE---T----------------------------TEEEEEETTCEEEECTTS
T ss_pred CCCCccCCEECCCcEE--EEEEeCEEEEEE---C----------------------------CEEEEECCCCEEEECCCC
Confidence 3455577888765444 788888876665 0 114789999999999999
Q ss_pred eEEEEeCCCcEEEE
Q psy12281 317 HHQVTNLEHTISIN 330 (456)
Q Consensus 317 ~H~V~nl~~sIsvn 330 (456)
.|...|.+++..+.
T Consensus 95 ~H~~~~~~~~~~~~ 108 (115)
T 1yhf_A 95 PHALYAVEAFQMLL 108 (115)
T ss_dssp CEEEEESSCEEEEE
T ss_pred CEEEEECCCceEEE
Confidence 99999998754443
No 45
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=94.00 E-value=0.17 Score=40.18 Aligned_cols=26 Identities=27% Similarity=0.331 Sum_probs=23.9
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
-+.++.|||++++|++-.|.+.|.++
T Consensus 59 ~~~~l~~Gd~~~~p~~~~H~~~N~g~ 84 (97)
T 2fqp_A 59 VTSQLTRGVSYTRPEGVEHNVINPSD 84 (97)
T ss_dssp EEEEECTTCCEEECTTCEEEEECCSS
T ss_pred EEEEEcCCCEEEeCCCCcccCEeCCC
Confidence 35789999999999999999999886
No 46
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=93.73 E-value=0.14 Score=51.22 Aligned_cols=61 Identities=15% Similarity=0.110 Sum_probs=46.3
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|..+++|..... .|+.++.|+=+.++ + ..+..+++||++|||++.
T Consensus 276 ~pG~~~~~H~h~~~--ev~~v~~G~g~~~v---~----------------------------~~~~~~~~GD~~~vP~~~ 322 (354)
T 2d40_A 276 PKGFASRVARTTDS--TIYHVVEGSGQVII---G----------------------------NETFSFSAKDIFVVPTWH 322 (354)
T ss_dssp CTTCBCCCBEESSC--EEEEEEEEEEEEEE---T----------------------------TEEEEEETTCEEEECTTC
T ss_pred CCCCCCCceecCCc--EEEEEEeCeEEEEE---C----------------------------CEEEEEcCCCEEEECCCC
Confidence 45666888887765 45888888877776 1 125899999999999999
Q ss_pred eEEEEeCCCcEEEE
Q psy12281 317 HHQVTNLEHTISIN 330 (456)
Q Consensus 317 ~H~V~nl~~sIsvn 330 (456)
+|+..|.++...+.
T Consensus 323 ~H~~~n~e~~~l~~ 336 (354)
T 2d40_A 323 GVSFQTTQDSVLFS 336 (354)
T ss_dssp CEEEEEEEEEEEEE
T ss_pred eEEEEeCCCEEEEE
Confidence 99999976544443
No 47
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=93.67 E-value=0.19 Score=52.41 Aligned_cols=75 Identities=13% Similarity=0.051 Sum_probs=54.9
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.+.+ ..++|+.+.. .-|..++.|+=++.+..+.. .+.+..+++|||+++
T Consensus 371 ~v~l~pG~-~~~pH~Hp~a-~Ei~yVl~G~~~v~v~~~~g-------------------------~~~~~~~l~~GDv~v 423 (493)
T 2d5f_A 371 YVVLYRNG-IYSPHWNLNA-NSVIYVTRGKGRVRVVNAQG-------------------------NAVFDGELRRGQLLV 423 (493)
T ss_dssp EEEECTTC-EEEEEEESSC-CEEEEEEEEEEEEEEECTTS-------------------------CEEEEEEEETTCEEE
T ss_pred EEEccCCc-eeeeeECCCC-CEEEEEEeceEEEEEEcCCC-------------------------CEEEeEEEcCCCEEE
Confidence 35556654 5999998854 34689999999988875531 134567899999999
Q ss_pred eCCCCeEEEEeCCCcEEEEeec
Q psy12281 312 VPSGWHHQVTNLEHTISINHNW 333 (456)
Q Consensus 312 IPsgW~H~V~nl~~sIsvn~~~ 333 (456)
||+|..|...|.++.+.+-.-+
T Consensus 424 vP~G~~H~~~n~~e~~~~l~~~ 445 (493)
T 2d5f_A 424 VPQNFVVAEQGGEQGLEYVVFK 445 (493)
T ss_dssp ECTTCEEEEEEEEEEEEEEEEE
T ss_pred ECCCCeEeeeeCCCCEEEEEEE
Confidence 9999999999876554444333
No 48
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=93.58 E-value=0.18 Score=51.18 Aligned_cols=25 Identities=20% Similarity=0.145 Sum_probs=23.2
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEeCC
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTNLE 324 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~nl~ 324 (456)
-++.++|||+++||+|.||+..|.+
T Consensus 332 e~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 332 KRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECC
T ss_pred EEEEEeCCCEEEECCCCeEEeEeCC
Confidence 4789999999999999999999986
No 49
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=93.53 E-value=0.17 Score=51.46 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=55.2
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV 312 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI 312 (456)
+-+.+ |+..++|+.+.. ..|..++.|+=+..++.|.... ... ..+.+...+++||+++|
T Consensus 244 v~l~p-G~~~~PH~h~~A-~Ei~yVl~G~g~v~vv~~~~~~---~~~----------------g~~~~~~~l~~GDV~vv 302 (397)
T 2phl_A 244 IEMEE-GALFVPHYYSKA-IVILVVNEGEAHVELVGPKGNK---ETL----------------EYESYRAELSKDDVFVI 302 (397)
T ss_dssp EEECT-TEEEEEEEESSC-EEEEEEEESEEEEEEEEECC-----CCS----------------CEEEEEEEEETTCEEEE
T ss_pred EEEcC-CcEeeeeEcCCC-CEEEEEEeeeEEEEEEeccccc---cCC----------------CceEEEEEecCCCEEEE
Confidence 45555 556999998854 5789999999999999774321 000 13577899999999999
Q ss_pred CCCCeEEEEeCCC
Q psy12281 313 PSGWHHQVTNLEH 325 (456)
Q Consensus 313 PsgW~H~V~nl~~ 325 (456)
|.|+.|...|.++
T Consensus 303 P~G~~h~~~n~~~ 315 (397)
T 2phl_A 303 PAAYPVAIKATSN 315 (397)
T ss_dssp CTTCCEEEEESSS
T ss_pred CCCCeEEEEeCCC
Confidence 9999999999974
No 50
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=93.52 E-value=0.24 Score=51.25 Aligned_cols=71 Identities=13% Similarity=0.110 Sum_probs=54.5
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.+. +..++|+.+..+ .|..++.|+=+..++.|.- .+.+..++++||+++
T Consensus 327 ~v~l~pG-gm~~PHwHp~A~-Ei~yV~~G~~~v~vV~~~g-------------------------~~~f~~~l~~GDVfv 379 (465)
T 3qac_A 327 KGVLYRN-AMMAPHYNLNAH-NIMYCVRGRGRIQIVNDQG-------------------------QSVFDEELSRGQLVV 379 (465)
T ss_dssp EEEECTT-CEEEEEEESSCC-EEEEEEEEEEEEEEECTTS-------------------------CEEEEEEEETTCEEE
T ss_pred EEEecCC-cEeeeEECCCCC-EEEEEEeCCEEEEEEeCCC-------------------------cEEEEEEecCCeEEE
Confidence 4556664 458999988754 7899999999999998752 135667899999999
Q ss_pred eCCCCeEEEEeCCCcEEE
Q psy12281 312 VPSGWHHQVTNLEHTISI 329 (456)
Q Consensus 312 IPsgW~H~V~nl~~sIsv 329 (456)
||.|+.|...+-++.+.+
T Consensus 380 vP~g~~h~~~ag~e~~~~ 397 (465)
T 3qac_A 380 VPQNFAIVKQAFEDGFEW 397 (465)
T ss_dssp ECTTCEEEEEEEEEEEEE
T ss_pred ECCCcEEEEEcCCCCeEE
Confidence 999999988665444433
No 51
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=93.50 E-value=0.1 Score=43.16 Aligned_cols=60 Identities=18% Similarity=0.144 Sum_probs=42.1
Q ss_pred eeCCCCCccccccccc-CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe
Q psy12281 234 YMGPKETWTPLHADVF-HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV 312 (456)
Q Consensus 234 ~iG~~gs~T~lH~D~~-~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI 312 (456)
.+.| |..+++|.... .-+ ..++.|+=++.+- + .-+..++|||+++|
T Consensus 45 ~~~p-g~~~~~H~H~~~~e~--~~Vl~G~~~~~~~------------~------------------~~~~~l~~Gd~~~i 91 (125)
T 3h8u_A 45 HAHP-GQEIASHVHPHGQDT--WTVISGEAEYHQG------------N------------------GIVTHLKAGDIAIA 91 (125)
T ss_dssp EECT-TCEECCC-CTTCEEE--EEEEECEEEEECS------------T------------------TCEEEEETTEEEEE
T ss_pred EECC-CCcCCcccCCCCeEE--EEEEEeEEEEEEC------------C------------------CeEEEeCCCCEEEE
Confidence 3444 55688998774 333 6688988655330 0 11578999999999
Q ss_pred CCCCeEEEEeCCCc
Q psy12281 313 PSGWHHQVTNLEHT 326 (456)
Q Consensus 313 PsgW~H~V~nl~~s 326 (456)
|+|-.|.+.|.++.
T Consensus 92 ~~~~~H~~~n~~~~ 105 (125)
T 3h8u_A 92 KPGQVHGAMNSGPE 105 (125)
T ss_dssp CTTCCCEEEECSSS
T ss_pred CCCCEEEeEeCCCC
Confidence 99999999998763
No 52
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=93.49 E-value=0.15 Score=48.16 Aligned_cols=77 Identities=14% Similarity=0.157 Sum_probs=46.9
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|...++|+.... .-|..++.|+=++.+ +-.+...+-.. +.+..+ ...+.....++|||++|||+|-
T Consensus 51 ~PG~~~~~H~H~~~-~E~~yVLeG~~~~~v-~~~~~~~~~~~----~~~~~~------~~~~~~~~~l~~GD~i~iP~g~ 118 (239)
T 2xlg_A 51 PPGGGPMPHIHYFI-NEWFWTPEGGIELFH-STKQYPNMDEL----PVVGGA------GRGDLYSIQSEPKQLIYSPNHY 118 (239)
T ss_dssp CTTCSCCSEEESSE-EEEEEETTCCCEEEE-EEEECCCTTSC----CSTTTT------CCEEEEEEECCTTEEEEECTTE
T ss_pred CCCCcCCCeECCCc-cEEEEEEEeEEEEEE-EecccccCCCc----cccccc------ccCceeEEEECCCCEEEECCCC
Confidence 45666888887632 224778888877766 10000000000 000000 0134568899999999999999
Q ss_pred eEEEEeCCC
Q psy12281 317 HHQVTNLEH 325 (456)
Q Consensus 317 ~H~V~nl~~ 325 (456)
.|...|.++
T Consensus 119 ~H~~~N~~~ 127 (239)
T 2xlg_A 119 MHGFVNPTD 127 (239)
T ss_dssp EEEEECCSS
T ss_pred CEEEEeCCC
Confidence 999999987
No 53
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=93.44 E-value=0.21 Score=49.47 Aligned_cols=60 Identities=20% Similarity=0.366 Sum_probs=45.5
Q ss_pred CCCccccccccc-CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 238 KETWTPLHADVF-HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 238 ~gs~T~lH~D~~-~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
+|+..++|.... .. +..++.|+=+..++.++. +..+..+++||+++||+|.
T Consensus 243 pg~~~~~H~H~~~~E--~~~Vl~G~~~~~v~~~~g--------------------------~~~~~~l~~GD~~~ip~~~ 294 (361)
T 2vqa_A 243 PGAMRQLHWHPNADE--WQYVLDGEMDLTVFASEG--------------------------KASVSRLQQGDVGYVPKGY 294 (361)
T ss_dssp TTCEEEEEECSSCCE--EEEEEESCEEEEEECSTT--------------------------CEEEEEECTTCEEEECTTC
T ss_pred CCcccccccCCCCCE--EEEEEeCEEEEEEEcCCC--------------------------cEEEEEECCCCEEEECCCC
Confidence 345577787765 33 478899988888765432 1236889999999999999
Q ss_pred eEEEEeCCC
Q psy12281 317 HHQVTNLEH 325 (456)
Q Consensus 317 ~H~V~nl~~ 325 (456)
+|...|.++
T Consensus 295 ~H~~~n~~~ 303 (361)
T 2vqa_A 295 GHAIRNSSQ 303 (361)
T ss_dssp EEEEECCSS
T ss_pred eEEeEECCC
Confidence 999999876
No 54
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=93.40 E-value=0.3 Score=43.57 Aligned_cols=73 Identities=16% Similarity=0.246 Sum_probs=55.9
Q ss_pred CccceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCC
Q psy12281 228 DDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAG 307 (456)
Q Consensus 228 ~~~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pG 307 (456)
.++..+.+|++++.+.+|.++.+-+ +.|+.|.=...+-.. .+...+++++|
T Consensus 34 ~~~~V~~v~Gpn~r~d~H~h~~dE~--FyvlkG~m~i~v~d~---------------------------g~~~~v~l~eG 84 (174)
T 1yfu_A 34 SDFIVTVVGGPNHRTDYHDDPLEEF--FYQLRGNAYLNLWVD---------------------------GRRERADLKEG 84 (174)
T ss_dssp CSEEEEEECSCBCCCCEEECSSCEE--EEEEESCEEEEEEET---------------------------TEEEEEEECTT
T ss_pred CcEEEEEEcCCCcCccCcCCCCceE--EEEEeeEEEEEEEcC---------------------------CceeeEEECCC
Confidence 4566778899999999999877765 899998755554211 12457999999
Q ss_pred CEEEeCCCCeEEEEeCC-CcEEE
Q psy12281 308 DSIFVPSGWHHQVTNLE-HTISI 329 (456)
Q Consensus 308 D~LfIPsgW~H~V~nl~-~sIsv 329 (456)
|+..||+|=-|.....+ +++.+
T Consensus 85 E~f~lP~gvpH~P~r~~~e~~~l 107 (174)
T 1yfu_A 85 DIFLLPPHVRHSPQRPEAGSACL 107 (174)
T ss_dssp CEEEECTTCCEEEEBCCTTCEEE
T ss_pred CEEEeCCCCCcCccccCCCCEEE
Confidence 99999999999997666 55444
No 55
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=93.39 E-value=0.2 Score=50.35 Aligned_cols=32 Identities=19% Similarity=0.089 Sum_probs=28.1
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEe
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTNLEHTISINH 331 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~ 331 (456)
.++..++||+++||++.||+..|.++++-+.+
T Consensus 317 ~~~~w~~gD~fvvP~w~~h~~~n~~~a~Lf~~ 348 (368)
T 3nw4_A 317 ETTKLEKGDMFVVPSWVPWSLQAETQFDLFRF 348 (368)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESSSEEEEEE
T ss_pred EEEEecCCCEEEECCCCcEEEEeCCCEEEEEE
Confidence 46899999999999999999999988766654
No 56
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=93.35 E-value=0.12 Score=52.76 Aligned_cols=65 Identities=15% Similarity=0.079 Sum_probs=50.0
Q ss_pred cceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCE
Q psy12281 230 YRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDS 309 (456)
Q Consensus 230 ~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~ 309 (456)
...+-+.|.+ ..++|+ ....-|..++.|+=+..++.|+. ..+..+++||+
T Consensus 51 ~~~~~l~PGg-~~~pHh--~~a~E~~yVl~G~g~v~~v~~~~---------------------------~~~~~l~~GDv 100 (416)
T 1uij_A 51 IVQFQSKPNT-ILLPHH--ADADFLLFVLSGRAILTLVNNDD---------------------------RDSYNLHPGDA 100 (416)
T ss_dssp EEEEEECTTE-EEEEEE--ESEEEEEEEEESCEEEEEECSSC---------------------------EEEEEECTTEE
T ss_pred EEEEEeccCc-Cccccc--CCCceEEEEEeeEEEEEEEECCC---------------------------CeEEEecCCCE
Confidence 3456677755 578882 34556789999999998876632 23578999999
Q ss_pred EEeCCCCeEEEEeCC
Q psy12281 310 IFVPSGWHHQVTNLE 324 (456)
Q Consensus 310 LfIPsgW~H~V~nl~ 324 (456)
++||+|..|.+.|.+
T Consensus 101 ~~iP~G~~H~~~N~g 115 (416)
T 1uij_A 101 QRIPAGTTYYLVNPH 115 (416)
T ss_dssp EEECTTCEEEEEECC
T ss_pred EEECCCCeEEEEecC
Confidence 999999999999994
No 57
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=93.32 E-value=0.21 Score=39.17 Aligned_cols=55 Identities=18% Similarity=0.110 Sum_probs=40.5
Q ss_pred CCCccccccccc-CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 238 KETWTPLHADVF-HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 238 ~gs~T~lH~D~~-~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
+|...+.|.... .-+ ..++.|+=...+ + .-+..+.|||++++|+|-
T Consensus 37 pg~~~~~H~H~~~~e~--~~v~~G~~~~~~---~----------------------------~~~~~l~~Gd~~~ip~~~ 83 (105)
T 1v70_A 37 PGQAQKVHVHEGSDKV--YYALEGEVVVRV---G----------------------------EEEALLAPGMAAFAPAGA 83 (105)
T ss_dssp TTCEEEEECCSSCEEE--EEEEESCEEEEE---T----------------------------TEEEEECTTCEEEECTTS
T ss_pred CCCcCCccCCCCCcEE--EEEEeCEEEEEE---C----------------------------CEEEEeCCCCEEEECCCC
Confidence 455578888653 234 678888766554 0 125789999999999999
Q ss_pred eEEEEeCCC
Q psy12281 317 HHQVTNLEH 325 (456)
Q Consensus 317 ~H~V~nl~~ 325 (456)
.|...|.++
T Consensus 84 ~H~~~~~~~ 92 (105)
T 1v70_A 84 PHGVRNESA 92 (105)
T ss_dssp CEEEECCSS
T ss_pred cEEeEeCCC
Confidence 999999875
No 58
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=93.32 E-value=0.14 Score=52.71 Aligned_cols=65 Identities=17% Similarity=0.076 Sum_probs=50.2
Q ss_pred cceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCE
Q psy12281 230 YRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDS 309 (456)
Q Consensus 230 ~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~ 309 (456)
...+-+.|.+. .++| ..+..-|..++.|+=+..++.|+. ..+..+++||+
T Consensus 63 ~~~~~l~PGg~-~~pH--h~~a~Ei~yVl~G~g~v~~v~~~~---------------------------~~~~~l~~GDv 112 (434)
T 2ea7_A 63 VVEFKSKPNTL-LLPH--HADADFLLVVLNGTAVLTLVNPDS---------------------------RDSYILEQGHA 112 (434)
T ss_dssp EEEEEECTTEE-EEEE--EESEEEEEEEEESEEEEEEECSSC---------------------------EEEEEEETTEE
T ss_pred EEEEEecCCcC-ccCc--cCCCceEEEEEecEEEEEEEeCCC---------------------------CEEEEeCCCCE
Confidence 34566677554 7888 334556799999999988876532 23578999999
Q ss_pred EEeCCCCeEEEEeCC
Q psy12281 310 IFVPSGWHHQVTNLE 324 (456)
Q Consensus 310 LfIPsgW~H~V~nl~ 324 (456)
++||+|..|.+.|.+
T Consensus 113 ~~iP~G~~H~~~N~g 127 (434)
T 2ea7_A 113 QKIPAGTTFFLVNPD 127 (434)
T ss_dssp EEECTTCEEEEEECC
T ss_pred EEECCCccEEEEeCC
Confidence 999999999999997
No 59
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=93.23 E-value=0.27 Score=43.50 Aligned_cols=56 Identities=13% Similarity=0.158 Sum_probs=43.2
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|..+++|.....-+ ..++.|+=...+ ..-+..++|||++|||+|-
T Consensus 64 ~pG~~~~~H~H~~~E~--~~Vl~G~~~~~i-------------------------------~~~~~~l~~Gd~i~ip~~~ 110 (167)
T 3ibm_A 64 EPGGYTTLERHEHTHV--VMVVRGHAEVVL-------------------------------DDRVEPLTPLDCVYIAPHA 110 (167)
T ss_dssp CTTCBCCCBBCSSCEE--EEEEESEEEEEE-------------------------------TTEEEEECTTCEEEECTTC
T ss_pred CCCCCCCCccCCCcEE--EEEEeCEEEEEE-------------------------------CCEEEEECCCCEEEECCCC
Confidence 3455588888876655 778888866654 0125789999999999999
Q ss_pred eEEEEeCC-C
Q psy12281 317 HHQVTNLE-H 325 (456)
Q Consensus 317 ~H~V~nl~-~ 325 (456)
.|+..|.+ +
T Consensus 111 ~H~~~n~~~~ 120 (167)
T 3ibm_A 111 WHQIHATGAN 120 (167)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEeCCCC
Confidence 99999987 5
No 60
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=93.19 E-value=0.23 Score=43.38 Aligned_cols=64 Identities=16% Similarity=0.118 Sum_probs=46.5
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|..+++|.....-+ ..++.|+=+..+-.++... +...-+..++|||+++||+|-
T Consensus 49 ~pg~~~~~H~H~~~E~--~~Vl~G~~~~~~~~~~~~~----------------------~~~~~~~~l~~Gd~i~ip~~~ 104 (163)
T 1lr5_A 49 SPGQRTPIHRHSCEEV--FTVLKGKGTLLMGSSSLKY----------------------PGQPQEIPFFQNTTFSIPVND 104 (163)
T ss_dssp CTTCBCCEEEESSCEE--EEEEECCEEEEECCSSSSS----------------------CCSCEEEEECTTEEEEECTTC
T ss_pred CCCCcCCCeECCCCeE--EEEEeCEEEEEECCccccc----------------------cCccEEEEeCCCCEEEECCCC
Confidence 3455688898876554 7889998877764321100 012356899999999999999
Q ss_pred eEEEEeCC
Q psy12281 317 HHQVTNLE 324 (456)
Q Consensus 317 ~H~V~nl~ 324 (456)
.|+..|.+
T Consensus 105 ~H~~~n~~ 112 (163)
T 1lr5_A 105 PHQVWNSD 112 (163)
T ss_dssp CEEEECCC
T ss_pred cEEeEeCC
Confidence 99999987
No 61
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=93.14 E-value=0.28 Score=39.78 Aligned_cols=60 Identities=8% Similarity=0.021 Sum_probs=43.9
Q ss_pred CCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCe
Q psy12281 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWH 317 (456)
Q Consensus 238 ~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~ 317 (456)
+|...+.|.....-+ ..++.|+=.+.+ + .-+..++|||+++||++=.
T Consensus 47 ~g~~~~~H~h~~~e~--~~vl~G~~~~~i---~----------------------------~~~~~l~~Gd~i~i~~~~~ 93 (114)
T 2ozj_A 47 DGESVSEEEYFGDTL--YLILQGEAVITF---D----------------------------DQKIDLVPEDVLMVPAHKI 93 (114)
T ss_dssp TTSSCCCBCCSSCEE--EEEEEEEEEEEE---T----------------------------TEEEEECTTCEEEECTTCC
T ss_pred CCCccccEECCCCeE--EEEEeCEEEEEE---C----------------------------CEEEEecCCCEEEECCCCc
Confidence 345577787665555 778888866655 0 1257899999999999999
Q ss_pred EEEEeCCCcEEEE
Q psy12281 318 HQVTNLEHTISIN 330 (456)
Q Consensus 318 H~V~nl~~sIsvn 330 (456)
|.+.|.+++..+.
T Consensus 94 H~~~~~~~~~~~~ 106 (114)
T 2ozj_A 94 HAIAGKGRFKMLQ 106 (114)
T ss_dssp BEEEEEEEEEEEE
T ss_pred EEEEeCCCcEEEE
Confidence 9999987654443
No 62
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=93.08 E-value=0.49 Score=42.18 Aligned_cols=78 Identities=15% Similarity=0.223 Sum_probs=59.2
Q ss_pred CccceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCC
Q psy12281 228 DDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAG 307 (456)
Q Consensus 228 ~~~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pG 307 (456)
.++..+++|+++..+.+|.|+.+-+ +.|+.|.=.-.+...+.. ..+..++.+++|
T Consensus 33 ~~~~V~~vgGPn~r~D~H~~~~eE~--Fy~lkG~m~l~v~d~g~~-----------------------~~~~~dv~i~eG 87 (176)
T 1zvf_A 33 GGFTVMIVGGPNERTDYHINPTPEW--FYQKKGSMLLKVVDETDA-----------------------EPKFIDIIINEG 87 (176)
T ss_dssp SSEEEEEECSSBCCSCEEECSSCEE--EEEEESCEEEEEEECSSS-----------------------SCEEEEEEECTT
T ss_pred CCEEEEEEcCCCcCCcCcCCCCceE--EEEEeCEEEEEEEcCCCc-----------------------ccceeeEEECCC
Confidence 3667789999889999998887765 999999866665432110 013567999999
Q ss_pred CEEEeCCCCeEEEEeCCCcEEEE
Q psy12281 308 DSIFVPSGWHHQVTNLEHTISIN 330 (456)
Q Consensus 308 D~LfIPsgW~H~V~nl~~sIsvn 330 (456)
|+..+|+|=-|.....++++.+=
T Consensus 88 dmfllP~gvpHsP~r~~e~v~lv 110 (176)
T 1zvf_A 88 DSYLLPGNVPHSPVRFADTVGIV 110 (176)
T ss_dssp EEEEECTTCCEEEEECTTCEEEE
T ss_pred CEEEcCCCCCcCCcccCCcEEEE
Confidence 99999999999996667666653
No 63
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=92.96 E-value=0.19 Score=44.02 Aligned_cols=55 Identities=22% Similarity=0.285 Sum_probs=42.9
Q ss_pred CCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCe
Q psy12281 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWH 317 (456)
Q Consensus 238 ~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~ 317 (456)
+|..+++|.....-+ ..++.|+=++.+ + .-+.+++|||++|||++-+
T Consensus 53 pG~~~~~H~H~~~E~--~~Vl~G~~~v~v---~----------------------------g~~~~l~~Gd~i~ip~~~~ 99 (156)
T 3kgz_A 53 EGGYSTLERHAHVHA--VMIHRGHGQCLV---G----------------------------ETISDVAQGDLVFIPPMTW 99 (156)
T ss_dssp EEEECCCBBCSSCEE--EEEEEEEEEEEE---T----------------------------TEEEEEETTCEEEECTTCC
T ss_pred CCCccCceeCCCcEE--EEEEeCEEEEEE---C----------------------------CEEEEeCCCCEEEECCCCc
Confidence 445578888776544 778888877665 0 1257899999999999999
Q ss_pred EEEEeCCC
Q psy12281 318 HQVTNLEH 325 (456)
Q Consensus 318 H~V~nl~~ 325 (456)
|++.|.++
T Consensus 100 H~~~n~g~ 107 (156)
T 3kgz_A 100 HQFRANRG 107 (156)
T ss_dssp EEEECCSS
T ss_pred EEeEeCCC
Confidence 99999877
No 64
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=92.94 E-value=0.33 Score=39.62 Aligned_cols=56 Identities=16% Similarity=0.181 Sum_probs=42.4
Q ss_pred CCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEE-EEcCCCEEEeCCCC
Q psy12281 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIV-EQEAGDSIFVPSGW 316 (456)
Q Consensus 238 ~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~-~l~pGD~LfIPsgW 316 (456)
+|..++.|.....-+ ..++.|+=++.+ + +. +. .+.|||+++||+|-
T Consensus 36 pg~~~~~H~H~~~e~--~~Vl~G~~~~~i---~---------~~-------------------~~~~l~~Gd~i~ip~~~ 82 (117)
T 2b8m_A 36 RGEQMPKHYSNSYVH--LIIIKGEMTLTL---E---------DQ-------------------EPHNYKEGNIVYVPFNV 82 (117)
T ss_dssp TTCBCCCEECSSCEE--EEEEESEEEEEE---T---------TS-------------------CCEEEETTCEEEECTTC
T ss_pred CCCcCCCEeCCCcEE--EEEEeCEEEEEE---C---------CE-------------------EEEEeCCCCEEEECCCC
Confidence 345578888765544 778999877766 1 00 13 78999999999999
Q ss_pred eEEEEeCCCc
Q psy12281 317 HHQVTNLEHT 326 (456)
Q Consensus 317 ~H~V~nl~~s 326 (456)
.|...|.+++
T Consensus 83 ~H~~~~~~~~ 92 (117)
T 2b8m_A 83 KMLIQNINSD 92 (117)
T ss_dssp EEEEECCSSS
T ss_pred cEEeEcCCCC
Confidence 9999998874
No 65
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=92.82 E-value=0.46 Score=43.94 Aligned_cols=76 Identities=18% Similarity=0.073 Sum_probs=51.1
Q ss_pred eeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeC
Q psy12281 234 YMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVP 313 (456)
Q Consensus 234 ~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIP 313 (456)
+.=++|..||.|=.. +..+..++.|.=+=..|.......+. ...-+.++.|||+.+++
T Consensus 78 l~W~PGq~spiHDH~--swg~~~Vl~G~l~e~~y~~~~~g~~~--------------------~~~~~~~l~~G~v~~~~ 135 (211)
T 3uss_A 78 FVWGPGQITPVHDHR--VWGLIGMLRGAEYSQPYAFDAGGRPH--------------------PSGARRRLEPGEVEALS 135 (211)
T ss_dssp EEECTTCBCCSBCCS--SCEEEEEEESCEEEEEEEECTTSCEE--------------------ECSCCEEECTTCEEEEB
T ss_pred EEECCCCcCCCCCCC--eeEEEEeeeceEEEEEeeeCCCCCcc--------------------cccceEEecCCCEEEEC
Confidence 334567779999544 66778999998777666422211000 00114789999999999
Q ss_pred CC--CeEEEEeCC-C--cEEEEe
Q psy12281 314 SG--WHHQVTNLE-H--TISINH 331 (456)
Q Consensus 314 sg--W~H~V~nl~-~--sIsvn~ 331 (456)
++ ..|+|.|.. + +|||..
T Consensus 136 p~~g~IH~V~N~~~d~~avSLHv 158 (211)
T 3uss_A 136 PRIGDVHQVSNAFSDRTSISIHV 158 (211)
T ss_dssp TTTBCCEEEEESCSSSCEEEEEE
T ss_pred CCCCCEEEEccCCCCCCEEEEEE
Confidence 77 999999984 3 666665
No 66
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=92.72 E-value=0.21 Score=41.89 Aligned_cols=56 Identities=23% Similarity=0.248 Sum_probs=40.9
Q ss_pred CCCccccccccc-CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 238 KETWTPLHADVF-HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 238 ~gs~T~lH~D~~-~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++...++|.... ..+ ..++.|+=++.+- + .-...++|||+++||+|-
T Consensus 52 ~g~~~~~H~H~~~~E~--~~vl~G~~~~~~~------------~------------------~~~~~l~~Gd~~~ip~g~ 99 (134)
T 2o8q_A 52 KEAKPTWHTHTVGFQL--FYVLRGWVEFEYE------------D------------------IGAVMLEAGGSAFQPPGV 99 (134)
T ss_dssp ----CCCEEECCSCEE--EEEEESEEEEEET------------T------------------TEEEEEETTCEEECCTTC
T ss_pred CCCCCCCEECCCCcEE--EEEEeCEEEEEEC------------C------------------cEEEEecCCCEEEECCCC
Confidence 455678898765 555 7889998777661 0 025789999999999999
Q ss_pred eEEEEeCCC
Q psy12281 317 HHQVTNLEH 325 (456)
Q Consensus 317 ~H~V~nl~~ 325 (456)
.|...|.++
T Consensus 100 ~H~~~~~~~ 108 (134)
T 2o8q_A 100 RHRELRHSD 108 (134)
T ss_dssp CEEEEEECT
T ss_pred cEEeEeCCC
Confidence 999999765
No 67
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=92.64 E-value=0.27 Score=50.19 Aligned_cols=84 Identities=11% Similarity=0.014 Sum_probs=56.0
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.+ |+..++|+.+.. ..|..++.|+=+..++.|.-... |.- ..+ .-.+.+.+...+++||+++
T Consensus 253 ~~~l~~-g~~~~pH~h~~A-~Ei~~V~~G~~~v~~v~~~g~~~-----~~~-----~~~--~~~~~~~~~~~l~~Gdv~v 318 (416)
T 1uij_A 253 SVDINE-GALLLPHFNSKA-IVILVINEGDANIELVGIKEQQQ-----KQK-----QEE--EPLEVQRYRAELSEDDVFV 318 (416)
T ss_dssp EEEECT-TEEEEEEEESSC-EEEEEEEESEEEEEEEEEC------------------------CCEEEEEEEEETTCEEE
T ss_pred EEEEcC-CcEecceEcCCC-cEEEEEEeeEEEEEEEcCCCccc-----ccc-----ccc--cccceEEEEEEecCCcEEE
Confidence 355665 455999998854 56899999999999997753110 000 000 0001246677999999999
Q ss_pred eCCCCeEEEEeCCCcEEEE
Q psy12281 312 VPSGWHHQVTNLEHTISIN 330 (456)
Q Consensus 312 IPsgW~H~V~nl~~sIsvn 330 (456)
||.|+.|...|.++ +.+-
T Consensus 319 vP~g~~h~~~n~~~-~~~l 336 (416)
T 1uij_A 319 IPAAYPFVVNATSN-LNFL 336 (416)
T ss_dssp ECTTCCEEEEESSS-EEEE
T ss_pred ECCCCeEEEEcCCC-eEEE
Confidence 99999999999954 4433
No 68
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=92.55 E-value=0.32 Score=50.14 Aligned_cols=77 Identities=14% Similarity=0.057 Sum_probs=55.1
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.+ |+..++|+.+.. ..|..++.|+=+..++.|.-...- ...|+ +.+.++.++++||+++
T Consensus 285 ~v~l~p-g~m~~PH~hp~A-~ei~~V~~G~~~v~vv~~~~~~~~-~~~g~--------------~~~~~~~~l~~GdV~v 347 (445)
T 2cav_A 285 CLQMNE-GALFVPHYNSRA-TVILVANEGRAEVELVGLEQQQQQ-GLESM--------------QLRRYAATLSEGDIIV 347 (445)
T ss_dssp EEEECT-TEEEEEEEESSC-EEEEEEEESCEEEEEEEC--------------------------CCEEEEEEECTTCEEE
T ss_pred EEEeeC-CceeeeEECCCC-cEEEEEEeeEEEEEEEeCCCcccc-cccCc--------------ceEEEEeEecCCcEEE
Confidence 355565 456999998865 578999999999999987522100 00010 1346889999999999
Q ss_pred eCCCCeEEEEeCCC
Q psy12281 312 VPSGWHHQVTNLEH 325 (456)
Q Consensus 312 IPsgW~H~V~nl~~ 325 (456)
||.|+.|...|.++
T Consensus 348 vP~g~~h~~~n~~~ 361 (445)
T 2cav_A 348 IPSSFPVALKAASD 361 (445)
T ss_dssp ECTTCCEEEEESSS
T ss_pred EcCCcEEEEEcCCC
Confidence 99999999999954
No 69
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=92.54 E-value=0.65 Score=39.31 Aligned_cols=63 Identities=16% Similarity=0.220 Sum_probs=46.8
Q ss_pred CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEE
Q psy12281 250 HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISI 329 (456)
Q Consensus 250 ~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsv 329 (456)
++..-..+++|+=++++|...... ...-.+...+|+..+||++-||.|+.+++.+.+
T Consensus 38 Gtwg~l~VL~G~L~f~~~~e~g~~-----------------------~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f 94 (127)
T 3bb6_A 38 GVYPRLSVMHGAVKYLGYADEHSA-----------------------EPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYF 94 (127)
T ss_dssp TEEEEEEEEESEEEEEEESSTTCS-----------------------SCSEEEEEEBTBEEECCSSCEEEEEESSTTCEE
T ss_pred CEEEEEEEEEeEEEEEEECCCCCc-----------------------ceeEEEEeCCCCceEECCCCcEEEEEcCCCEEE
Confidence 445557899999999886543320 122357888999999999999999998887777
Q ss_pred EeecCC
Q psy12281 330 NHNWIN 335 (456)
Q Consensus 330 n~~~~~ 335 (456)
+.+|..
T Consensus 95 ~leFyc 100 (127)
T 3bb6_A 95 NIDFFV 100 (127)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 666643
No 70
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=92.48 E-value=0.23 Score=39.72 Aligned_cols=55 Identities=13% Similarity=0.082 Sum_probs=40.1
Q ss_pred CCCccccc--ccc-cCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCC
Q psy12281 238 KETWTPLH--ADV-FHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPS 314 (456)
Q Consensus 238 ~gs~T~lH--~D~-~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPs 314 (456)
+|..++.| ... ...+ ..++.|+=++.+ + .-+..+.|||+++||+
T Consensus 30 pg~~~~~h~~~H~~~~e~--~~vl~G~~~~~~---~----------------------------~~~~~l~~Gd~~~i~~ 76 (113)
T 2gu9_A 30 PGDREGGPDNRHRGADQW--LFVVDGAGEAIV---D----------------------------GHTQALQAGSLIAIER 76 (113)
T ss_dssp TTCEEECCCSSSCCCEEE--EEEEECCEEEEE---T----------------------------TEEEEECTTEEEEECT
T ss_pred CCCccCCcccccCCCcEE--EEEEeCEEEEEE---C----------------------------CEEEEeCCCCEEEECC
Confidence 34456777 544 3333 778888877665 0 1247899999999999
Q ss_pred CCeEEEEeCCC
Q psy12281 315 GWHHQVTNLEH 325 (456)
Q Consensus 315 gW~H~V~nl~~ 325 (456)
+-.|...|.++
T Consensus 77 ~~~H~~~~~~~ 87 (113)
T 2gu9_A 77 GQAHEIRNTGD 87 (113)
T ss_dssp TCCEEEECCSS
T ss_pred CCcEEeEcCCC
Confidence 99999999875
No 71
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=92.30 E-value=0.34 Score=48.53 Aligned_cols=65 Identities=23% Similarity=0.374 Sum_probs=49.2
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV 312 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI 312 (456)
+.+.+.+ ..++|+.... -|..++.|+=++.+...+. +.....+++||+++|
T Consensus 84 ~~l~pg~-~~~~H~H~~~--E~~~Vl~G~~~~~~~~~~g--------------------------~~~~~~l~~GD~~~i 134 (385)
T 1j58_A 84 MRLKPGA-IRELHWHKEA--EWAYMIYGSARVTIVDEKG--------------------------RSFIDDVGEGDLWYF 134 (385)
T ss_dssp EEECTTC-EEEEEEESSC--EEEEEEEEEEEEEEECTTS--------------------------CEEEEEEETTEEEEE
T ss_pred EEECCCC-CCCCccCChh--eEEEEEeeeEEEEEEeCCC--------------------------cEEEEEeCCCCEEEE
Confidence 4555544 5888988743 5689999998888864421 233458999999999
Q ss_pred CCCCeEEEEeCCCc
Q psy12281 313 PSGWHHQVTNLEHT 326 (456)
Q Consensus 313 PsgW~H~V~nl~~s 326 (456)
|+|.+|...|.++.
T Consensus 135 p~g~~H~~~n~~~~ 148 (385)
T 1j58_A 135 PSGLPHSIQALEEG 148 (385)
T ss_dssp CTTCCEEEEEEEEE
T ss_pred CCCCeEEEEECCCC
Confidence 99999999998763
No 72
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=92.24 E-value=0.5 Score=43.50 Aligned_cols=76 Identities=18% Similarity=0.143 Sum_probs=52.5
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCC-CcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGN-EKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~-~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
++.=++|..||.|-... ..+..++.|.=+=.+|.... ...+ ...-+.++.||++.+
T Consensus 83 ~l~w~PGq~spiHdH~~--~~~~~VL~G~l~e~~y~~~~~g~~l---------------------~~~~~~~l~~G~v~~ 139 (208)
T 2gm6_A 83 SFVWGPGQRTPIHDHTV--WGLIGMLRGAEYSQPFVLDGSGRPV---------------------LHGEPTRLEPGHVEA 139 (208)
T ss_dssp EEEECTTCBCCSBCCSS--CEEEEEEESCEEEEEEEECTTSCEE---------------------ECSCCEEECTTCEEE
T ss_pred EEEeCCCcccCcccCCc--ceEEEEecccEEEEEeecCCCCccc---------------------cccceEEeCCCCEEE
Confidence 33336688899997653 56688999987777763221 1111 011257899999999
Q ss_pred eCC--CCeEEEEeC-CC--cEEEEe
Q psy12281 312 VPS--GWHHQVTNL-EH--TISINH 331 (456)
Q Consensus 312 IPs--gW~H~V~nl-~~--sIsvn~ 331 (456)
++. |..|+|.|. ++ +|||..
T Consensus 140 ~~~~~g~iH~V~N~~~~~~avsLHv 164 (208)
T 2gm6_A 140 VSPTVGDIHRVHNAYDDRVSISIHV 164 (208)
T ss_dssp EBTTTBCCEEEEESCSSSCEEEEEE
T ss_pred ECCCCCCeEEeccCCCCCcEEEEEE
Confidence 999 999999998 34 666655
No 73
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=92.22 E-value=0.62 Score=41.74 Aligned_cols=82 Identities=12% Similarity=0.005 Sum_probs=49.9
Q ss_pred eeeCCCCCccccccccc------CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC
Q psy12281 233 VYMGPKETWTPLHADVF------HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA 306 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~------~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p 306 (456)
+++- +|..+|+|+.+. ..=.|. ++.|.=+.++ ++.... .....+| |-. ..--...-+++|+|
T Consensus 58 l~l~-pGQ~~P~H~H~~~~~~~gK~E~~i-vr~G~v~l~~--~g~~~~--~~~v~v~-dg~-----~~~~~a~~~i~L~p 125 (175)
T 2y0o_A 58 LVLF-PGQTCPEHRHPPVDGQEGKQETFR-CRYGKVYLYV--EGEKTP--LPKVLPP-QED-----REHYTVWHEIELEP 125 (175)
T ss_dssp EEEC-TTCEEEEEECCCCTTSCCCCEEEE-EEEEEEEEEE--SSSCCS--SCSCCCC-GGG-----GGGCCCCEEEEECT
T ss_pred EEEC-CCCcCCceECCCCCCCCCCceeEE-EecCEEEEEE--CCcccc--Ccceecc-CCc-----eeeecCCcEEEECC
Confidence 4444 477899999998 433445 7778744444 333221 1001111 100 00014467899999
Q ss_pred CCEEEeCCCCeEEEEeCCCc
Q psy12281 307 GDSIFVPSGWHHQVTNLEHT 326 (456)
Q Consensus 307 GD~LfIPsgW~H~V~nl~~s 326 (456)
||.+.||+|-||...+.++.
T Consensus 126 GesvtIppg~~H~f~ageeg 145 (175)
T 2y0o_A 126 GGQYTIPPNTKHWFQAGEEG 145 (175)
T ss_dssp TCEEEECTTCCEEEEEEEEE
T ss_pred CCEEEECCCCcEEEEeCCCC
Confidence 99999999999999995443
No 74
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=92.22 E-value=0.51 Score=38.93 Aligned_cols=62 Identities=21% Similarity=0.127 Sum_probs=44.9
Q ss_pred CCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCeE
Q psy12281 239 ETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHH 318 (456)
Q Consensus 239 gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~H 318 (456)
|..++.|.....-+ ..++.|+-++.+ ..-+..++|||+++||+|=.|
T Consensus 44 g~~~~~H~H~~~Ei--~~v~~G~~~~~i-------------------------------~~~~~~l~~Gd~~~i~~~~~H 90 (128)
T 4i4a_A 44 ETKSFRHSHNEYEL--FIVIQGNAIIRI-------------------------------NDEDFPVTKGDLIIIPLDSEH 90 (128)
T ss_dssp TEECCCBCCSSEEE--EEEEESEEEEEE-------------------------------TTEEEEEETTCEEEECTTCCE
T ss_pred CCccCCEecCCeEE--EEEEeCEEEEEE-------------------------------CCEEEEECCCcEEEECCCCcE
Confidence 44578888755444 788888877665 012578999999999999999
Q ss_pred EEEeCCC--cEEEEeec
Q psy12281 319 QVTNLEH--TISINHNW 333 (456)
Q Consensus 319 ~V~nl~~--sIsvn~~~ 333 (456)
.+.|.++ ...+...|
T Consensus 91 ~~~~~~~~~~~~~~i~f 107 (128)
T 4i4a_A 91 HVINNNQEDFHFYTIWW 107 (128)
T ss_dssp EEEECSSSCEEEEEEEE
T ss_pred EeEeCCCCCEEEEEEEE
Confidence 9999765 34445444
No 75
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=92.21 E-value=0.56 Score=40.19 Aligned_cols=61 Identities=16% Similarity=0.054 Sum_probs=43.7
Q ss_pred CCCcccccccccC-ccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 238 KETWTPLHADVFH-SYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 238 ~gs~T~lH~D~~~-~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
+|..++.|..... -+ ..++.|+=++.+-.-. . ...++..+.|||+++||+|-
T Consensus 52 pg~~~~~H~H~~~~E~--~~Vl~G~~~~~i~~~~--~-----------------------~~~~~~~l~~Gd~i~ip~g~ 104 (148)
T 2oa2_A 52 VGEDIGLEIHPHLDQF--LRVEEGRGLVQMGHRQ--D-----------------------NLHFQEEVFDDYAILIPAGT 104 (148)
T ss_dssp TTCBCCCBCCTTCEEE--EEEEESEEEEEEESBT--T-----------------------BCCEEEEEETTCEEEECTTC
T ss_pred CCCccCceECCCCcEE--EEEEeCEEEEEECCcc--c-----------------------cceeeEEECCCCEEEECCCC
Confidence 3555778876532 34 7789998877762100 0 11356899999999999999
Q ss_pred eEEEEeCCC
Q psy12281 317 HHQVTNLEH 325 (456)
Q Consensus 317 ~H~V~nl~~ 325 (456)
.|...|.++
T Consensus 105 ~H~~~n~~~ 113 (148)
T 2oa2_A 105 WHNVRNTGN 113 (148)
T ss_dssp EEEEEECSS
T ss_pred cEEEEECCC
Confidence 999999876
No 76
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=92.03 E-value=0.22 Score=44.19 Aligned_cols=55 Identities=13% Similarity=0.075 Sum_probs=41.1
Q ss_pred CCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCe
Q psy12281 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWH 317 (456)
Q Consensus 238 ~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~ 317 (456)
+|..+++|.....-+ ..++.|+=...+ ..-+..++|||+++||+|=+
T Consensus 62 pG~~~~~H~H~~~E~--~~Vl~G~~~~~v-------------------------------~g~~~~l~~GD~i~ip~g~~ 108 (166)
T 3jzv_A 62 PGGHSTLERHQHAHG--VMILKGRGHAMV-------------------------------GRAVSAVAPYDLVTIPGWSW 108 (166)
T ss_dssp EEEECCCBBCSSCEE--EEEEEECEEEEE-------------------------------TTEEEEECTTCEEEECTTCC
T ss_pred CCCccCceeCCCcEE--EEEEeCEEEEEE-------------------------------CCEEEEeCCCCEEEECCCCc
Confidence 345577887766544 667888766544 01257899999999999999
Q ss_pred EEEEeCCC
Q psy12281 318 HQVTNLEH 325 (456)
Q Consensus 318 H~V~nl~~ 325 (456)
|+..|.++
T Consensus 109 H~~~n~~~ 116 (166)
T 3jzv_A 109 HQFRAPAD 116 (166)
T ss_dssp EEEECCTT
T ss_pred EEeEeCCC
Confidence 99999876
No 77
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=91.99 E-value=0.15 Score=43.04 Aligned_cols=57 Identities=21% Similarity=0.201 Sum_probs=42.2
Q ss_pred CCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCe
Q psy12281 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWH 317 (456)
Q Consensus 238 ~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~ 317 (456)
+|..+++|....... ..++.|+-+..+.- ..-+.++.|||+++||+|-.
T Consensus 48 pg~~~~~H~H~~~e~--~~vl~G~~~~~~~~-----------------------------~~~~~~l~~Gd~~~ip~~~~ 96 (145)
T 3ht1_A 48 PNGSTPPHFHEWEHE--IYVLEGSMGLVLPD-----------------------------QGRTEEVGPGEAIFIPRGEP 96 (145)
T ss_dssp EEEECCCEECSSCEE--EEEEEECEEEEEGG-----------------------------GTEEEEECTTCEEEECTTCC
T ss_pred CCCcCCCccCCCceE--EEEEEeEEEEEEeE-----------------------------CCEEEEECCCCEEEECCCCe
Confidence 455578888877666 56788876554200 01257899999999999999
Q ss_pred EEEEeCCC
Q psy12281 318 HQVTNLEH 325 (456)
Q Consensus 318 H~V~nl~~ 325 (456)
|...|.++
T Consensus 97 H~~~~~~~ 104 (145)
T 3ht1_A 97 HGFVTGPG 104 (145)
T ss_dssp BEEECCTT
T ss_pred EEeEcCCC
Confidence 99999876
No 78
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=91.93 E-value=0.23 Score=51.08 Aligned_cols=79 Identities=11% Similarity=0.048 Sum_probs=55.1
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.+. +..++|+.+.. .-|..++.|+=+..++.|.-... ....|. . .+.+.+..++++||+++
T Consensus 270 ~v~l~pG-~m~~pH~hp~A-~Ei~~V~~G~~~v~vv~~~g~~~-~~~~~~-----------~-~~~r~~~~~l~~Gdv~v 334 (434)
T 2ea7_A 270 SVDMKEG-ALLLPHYSSKA-IVIMVINEGEAKIELVGLSDQQQ-QKQQEE-----------S-LEVQRYRAELSEDDVFV 334 (434)
T ss_dssp EEEECTT-EEEEEEEESSC-EEEEEEEESCEEEEEEEEEECCC-CTTSCC-----------C-EEEEEEEEEECTTCEEE
T ss_pred EEEEcCC-eeeccEEcCCC-CEEEEEEeeEEEEEEEecCcccc-cccccc-----------C-cceEEEEEEecCCcEEE
Confidence 4566664 45899998865 57899999999999997742110 000000 0 00235667999999999
Q ss_pred eCCCCeEEEEeCCC
Q psy12281 312 VPSGWHHQVTNLEH 325 (456)
Q Consensus 312 IPsgW~H~V~nl~~ 325 (456)
||.|+.|...|.++
T Consensus 335 vP~g~~h~~~n~~~ 348 (434)
T 2ea7_A 335 IPAAYPVAINATSN 348 (434)
T ss_dssp ECTTCCEEEEESSS
T ss_pred ECCCCeEEEEcCCC
Confidence 99999999999965
No 79
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=91.85 E-value=0.21 Score=50.57 Aligned_cols=26 Identities=27% Similarity=0.242 Sum_probs=23.9
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEe-CCC
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTN-LEH 325 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~n-l~~ 325 (456)
-++.+++||++++|+|.||...| .++
T Consensus 162 ~~~~~~~GD~i~~P~g~~H~~~N~~gd 188 (394)
T 3bu7_A 162 HKVELGANDFVLTPNGTWHEHGILESG 188 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECTTC
T ss_pred EEEEEcCCCEEEECcCCCEEEEcCCCC
Confidence 36899999999999999999999 776
No 80
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=91.48 E-value=1 Score=40.27 Aligned_cols=72 Identities=7% Similarity=-0.095 Sum_probs=49.7
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEc---CCCE
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQE---AGDS 309 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~---pGD~ 309 (456)
+....+|+.-.+|+..... -...++.|+=..+++.-... +|.+ .+...++|. ++-.
T Consensus 57 ~s~s~~GvlRG~H~h~~q~-klv~~v~G~v~dv~vD~R~~---------------SpTf-----g~~~~v~Ls~~~n~~~ 115 (174)
T 3ejk_A 57 FSEVLPRRVKAWKRHSLMT-QLFAVPVGCIHVVLYDGREK---------------SPTS-----GRLAQVTLGRPDNYRL 115 (174)
T ss_dssp EEEECBTCEEEEEEESSCC-EEEEEEESEEEEEEECCCTT---------------CTTT-----TCEEEEEEETTTBCEE
T ss_pred EEECCCCCEECcEecCCCc-eEEEEEeeEEEEEEEeCCCC---------------CCCC-----CeEEEEEECCccCceE
Confidence 3445678888899876422 23677788877777543221 1111 345677776 7789
Q ss_pred EEeCCCCeEEEEeCCC
Q psy12281 310 IFVPSGWHHQVTNLEH 325 (456)
Q Consensus 310 LfIPsgW~H~V~nl~~ 325 (456)
||||+|+||...++++
T Consensus 116 L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 116 LRIPPQVWYGFAATGD 131 (174)
T ss_dssp EEECTTCEEEEEECTT
T ss_pred EEeCCCcEEEEEEccC
Confidence 9999999999999988
No 81
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=91.38 E-value=0.52 Score=45.89 Aligned_cols=73 Identities=23% Similarity=0.246 Sum_probs=49.8
Q ss_pred CCCCCcccccccc-cCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCC
Q psy12281 236 GPKETWTPLHADV-FHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPS 314 (456)
Q Consensus 236 G~~gs~T~lH~D~-~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPs 314 (456)
.++|...++|... .. -|..++.|+=++++ + | -+..+++||++|+|+
T Consensus 53 ~~pg~~~~~h~H~~~~--e~~~Vl~G~~~~~~---~---------~-------------------~~~~l~~Gd~~~~p~ 99 (337)
T 1y3t_A 53 GGKGDAFPLHVHKDTH--EGILVLDGKLELTL---D---------G-------------------ERYLLISGDYANIPA 99 (337)
T ss_dssp ECTTCEEEEEECTTCC--EEEEEEESCEEEEE---T---------T-------------------EEEEECTTCEEEECT
T ss_pred eCCCCCCCceeCCCce--EEEEEEECEEEEEE---C---------C-------------------EEEEECCCCEEEECC
Confidence 3445667888876 33 34888999877765 1 1 147899999999999
Q ss_pred CCeEEEEeCCCcEEEEeecCCCCCHHHH
Q psy12281 315 GWHHQVTNLEHTISINHNWINGTNIDHV 342 (456)
Q Consensus 315 gW~H~V~nl~~sIsvn~~~~~~~nl~~~ 342 (456)
|-+|...|.++.. .-.+......+...
T Consensus 100 ~~~H~~~n~~~~~-~~~~~~~p~~~~~~ 126 (337)
T 1y3t_A 100 GTPHSYRMQSHRT-RLVSYTMKGNVAHL 126 (337)
T ss_dssp TCCEEEEECSTTE-EEEEEEETTSSTHH
T ss_pred CCcEEEEECCCCe-EEEEEECCCCHHHH
Confidence 9999999998742 22233344444443
No 82
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=91.35 E-value=0.59 Score=38.88 Aligned_cols=58 Identities=12% Similarity=0.055 Sum_probs=42.5
Q ss_pred eeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeC
Q psy12281 234 YMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVP 313 (456)
Q Consensus 234 ~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIP 313 (456)
+.-.+|...+.|. ..+- |..++.|+=+..+ + .-+.+++|||+++||
T Consensus 45 ~~~~pG~~~~~H~-~~~E--~~~Vl~G~~~~~~---~----------------------------g~~~~l~~GD~v~ip 90 (119)
T 3lwc_A 45 GRYAPGQSLTETM-AVDD--VMIVLEGRLSVST---D----------------------------GETVTAGPGEIVYMP 90 (119)
T ss_dssp EEECTTCEEEEEC-SSEE--EEEEEEEEEEEEE---T----------------------------TEEEEECTTCEEEEC
T ss_pred EEECCCCCcCccC-CCCE--EEEEEeCEEEEEE---C----------------------------CEEEEECCCCEEEEC
Confidence 3334566678887 3333 3789999977766 1 115789999999999
Q ss_pred CCCeEEEEeCCC
Q psy12281 314 SGWHHQVTNLEH 325 (456)
Q Consensus 314 sgW~H~V~nl~~ 325 (456)
+|-.|...|.++
T Consensus 91 ~g~~H~~~~~~~ 102 (119)
T 3lwc_A 91 KGETVTIRSHEE 102 (119)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCEEEEEcCCC
Confidence 999999998743
No 83
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=91.29 E-value=0.58 Score=43.32 Aligned_cols=65 Identities=11% Similarity=0.033 Sum_probs=50.8
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
.+|+..+.|.-+..-+ ..++.|+=++++ .| -+.+++|||.+|+|+|-
T Consensus 45 ~~G~~~~~h~h~~~~~--~~Vl~G~~~~~i------------~~-------------------~~~~l~~Gd~~~~p~~~ 91 (227)
T 3rns_A 45 AKDEEITAEAMLGNRY--YYCFNGNGEIFI------------EN-------------------NKKTISNGDFLEITANH 91 (227)
T ss_dssp CTTCEEEECSCSSCEE--EEEEESEEEEEE------------SS-------------------CEEEEETTEEEEECSSC
T ss_pred CCCCccCccccCCCEE--EEEEeCEEEEEE------------CC-------------------EEEEECCCCEEEECCCC
Confidence 4567788898777665 788999987776 11 14789999999999999
Q ss_pred eEEEEeCCCcEEEEeecC
Q psy12281 317 HHQVTNLEHTISINHNWI 334 (456)
Q Consensus 317 ~H~V~nl~~sIsvn~~~~ 334 (456)
.|.+.+.+++.-+-....
T Consensus 92 ~H~~~a~~~~~~l~i~~~ 109 (227)
T 3rns_A 92 NYSIEARDNLKLIEIGEK 109 (227)
T ss_dssp CEEEEESSSEEEEEEEEC
T ss_pred CEEEEECCCcEEEEEEee
Confidence 999999999766655443
No 84
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=91.28 E-value=0.71 Score=40.03 Aligned_cols=60 Identities=15% Similarity=0.115 Sum_probs=43.3
Q ss_pred eeeCCCCCccccccc-ccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 233 VYMGPKETWTPLHAD-VFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 233 l~iG~~gs~T~lH~D-~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
+-+.|.+..+++|.. ...-+ ..++.|+=.+.+ . .-+..++|||+++
T Consensus 51 ~~l~pg~~~~~~H~H~~~~E~--~~Vl~G~~~~~~------------~-------------------~~~~~l~~Gd~i~ 97 (162)
T 3l2h_A 51 IQIEPGKESTEYHLHHYEEEA--VYVLSGKGTLTM------------E-------------------NDQYPIAPGDFVG 97 (162)
T ss_dssp EEECTTCBSSSSBEESSCCEE--EEEEESCEEEEE------------T-------------------TEEEEECTTCEEE
T ss_pred EEECCCCcCCCCccCCCCCEE--EEEEEEEEEEEE------------C-------------------CEEEEeCCCCEEE
Confidence 344554434788887 34444 778888866654 0 1257899999999
Q ss_pred eCCC-CeEEEEeCCC
Q psy12281 312 VPSG-WHHQVTNLEH 325 (456)
Q Consensus 312 IPsg-W~H~V~nl~~ 325 (456)
||++ -.|...|.++
T Consensus 98 i~~~~~~H~~~n~~~ 112 (162)
T 3l2h_A 98 FPCHAAAHSISNDGT 112 (162)
T ss_dssp ECTTSCCEEEECCSS
T ss_pred ECCCCceEEeEeCCC
Confidence 9997 9999999876
No 85
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=91.24 E-value=0.27 Score=50.64 Aligned_cols=63 Identities=17% Similarity=0.151 Sum_probs=48.7
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.|.+ ..++| ....--|..++.|+=+..++.|+. ..+..+++||+++
T Consensus 90 ~~~l~Pgg-~~~pH--h~~a~E~~yVl~G~g~v~~v~~~~---------------------------~~~~~l~~GDv~~ 139 (445)
T 2cav_A 90 EYCSKPNT-LLLPH--HSDSDLLVLVLEGQAILVLVNPDG---------------------------RDTYKLDQGDAIK 139 (445)
T ss_dssp EEEECSSE-EEEEE--EESSEEEEEEEESEEEEEEEETTE---------------------------EEEEEEETTEEEE
T ss_pred EEEECCCc-CccCc--CCCCceEEEEEeCEEEEEEEeCCC---------------------------CEEEEecCCCEEE
Confidence 34566654 47888 234556799999999998876542 1357899999999
Q ss_pred eCCCCeEEEEeCC
Q psy12281 312 VPSGWHHQVTNLE 324 (456)
Q Consensus 312 IPsgW~H~V~nl~ 324 (456)
+|+|-.|...|.+
T Consensus 140 ~P~G~~H~~~N~g 152 (445)
T 2cav_A 140 IQAGTPFYLINPD 152 (445)
T ss_dssp ECTTCCEEEEECC
T ss_pred ECCCCcEEEEECC
Confidence 9999999999997
No 86
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=90.95 E-value=0.19 Score=42.35 Aligned_cols=26 Identities=23% Similarity=0.450 Sum_probs=23.5
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCCc
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEHT 326 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~s 326 (456)
.++++|||++++|+|.-|...|.++.
T Consensus 88 ~~~l~~GD~~~ip~g~~h~~~~~~~~ 113 (123)
T 3bcw_A 88 VHAVKAGDAFIMPEGYTGRWEVDRHV 113 (123)
T ss_dssp EEEEETTCEEEECTTCCCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCeEEEEECCce
Confidence 47899999999999999999998763
No 87
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=90.64 E-value=0.92 Score=37.33 Aligned_cols=59 Identities=14% Similarity=0.104 Sum_probs=41.3
Q ss_pred eeCCCCCccc-ccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe
Q psy12281 234 YMGPKETWTP-LHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV 312 (456)
Q Consensus 234 ~iG~~gs~T~-lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI 312 (456)
.+-+ |...+ .|....... ...++.|+=...+ . .-+..++|||+++|
T Consensus 32 ~~~p-g~~~~~~H~H~~~e~-~~~vl~G~~~~~i------------~-------------------~~~~~l~~Gd~i~i 78 (125)
T 3cew_A 32 HLPA-GAGVPFVHSHKQNEE-IYGILSGKGFITI------------D-------------------GEKIELQAGDWLRI 78 (125)
T ss_dssp EECT-TCBCSSEEEESSEEE-EEEEEEEEEEEEE------------T-------------------TEEEEEETTEEEEE
T ss_pred EECC-CCCCCCCccCCCceE-EEEEEeCEEEEEE------------C-------------------CEEEEeCCCCEEEE
Confidence 3444 44466 788654433 1338888877655 0 12578999999999
Q ss_pred CCCCeEEEEeCCC
Q psy12281 313 PSGWHHQVTNLEH 325 (456)
Q Consensus 313 PsgW~H~V~nl~~ 325 (456)
|++-.|+..|.++
T Consensus 79 ~~~~~H~~~~~~~ 91 (125)
T 3cew_A 79 APDGKRQISAASD 91 (125)
T ss_dssp CTTCCEEEEEBTT
T ss_pred CCCCcEEEEcCCC
Confidence 9999999999865
No 88
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=90.53 E-value=0.61 Score=45.36 Aligned_cols=61 Identities=18% Similarity=0.120 Sum_probs=44.0
Q ss_pred eeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeC
Q psy12281 234 YMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVP 313 (456)
Q Consensus 234 ~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIP 313 (456)
.+.++|...++|.... ..-+..++.|+=+..+ + .-+..+++||+++||
T Consensus 223 ~~~p~g~~~~~h~H~~-~~e~~~vl~G~~~~~i---~----------------------------~~~~~l~~GD~~~ip 270 (337)
T 1y3t_A 223 SEGPKGDRIVDHYHEY-HTETFYCLEGQMTMWT---D----------------------------GQEIQLNPGDFLHVP 270 (337)
T ss_dssp EEECSCCCCCCEECSS-CEEEEEEEESCEEEEE---T----------------------------TEEEEECTTCEEEEC
T ss_pred EEcCCCCCCCCcCCCC-CcEEEEEEeCEEEEEE---C----------------------------CEEEEECCCCEEEEC
Confidence 3456666677787652 1234778888866655 0 125789999999999
Q ss_pred CCCeEEEEeCCCc
Q psy12281 314 SGWHHQVTNLEHT 326 (456)
Q Consensus 314 sgW~H~V~nl~~s 326 (456)
++-.|...|.++.
T Consensus 271 ~~~~H~~~n~~~~ 283 (337)
T 1y3t_A 271 ANTVHSYRLDSHY 283 (337)
T ss_dssp TTCCEEEEECSSS
T ss_pred CCCeEEEEECCCC
Confidence 9999999999873
No 89
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=90.48 E-value=0.84 Score=37.27 Aligned_cols=24 Identities=25% Similarity=0.344 Sum_probs=22.5
Q ss_pred EEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 302 VEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 302 ~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
..++|||.+|||++=.|.+.|.++
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECS
T ss_pred EEECCCCEEEECCCCcEEEEeCCC
Confidence 679999999999999999999875
No 90
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=90.43 E-value=0.4 Score=47.94 Aligned_cols=62 Identities=23% Similarity=0.317 Sum_probs=45.1
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|..++.|..... .-|..++.|+=+..+..++ ....+..+++||+++||++.
T Consensus 265 ~pG~~~~~h~H~~~-~E~~~Vl~G~~~~~i~~~~--------------------------g~~~~~~l~~GD~~~ip~~~ 317 (385)
T 1j58_A 265 EPGAMRELHWHPNT-HEWQYYISGKARMTVFASD--------------------------GHARTFNYQAGDVGYVPFAM 317 (385)
T ss_dssp CTTCEEEEEECSSS-CEEEEEEESEEEEEEEEET--------------------------TEEEEEEEESSCEEEECTTC
T ss_pred CCCcccCceeCCCC-CEEEEEEeCeEEEEEEcCC--------------------------CcEEEEEEcCCCEEEECCCC
Confidence 34555777877651 2348889998887775221 11246789999999999999
Q ss_pred eEEEEeCCC
Q psy12281 317 HHQVTNLEH 325 (456)
Q Consensus 317 ~H~V~nl~~ 325 (456)
+|...|.++
T Consensus 318 ~H~~~n~~~ 326 (385)
T 1j58_A 318 GHYVENIGD 326 (385)
T ss_dssp BEEEEECSS
T ss_pred eEEEEECCC
Confidence 999999876
No 91
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=90.33 E-value=0.63 Score=43.09 Aligned_cols=67 Identities=22% Similarity=0.258 Sum_probs=50.5
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV 312 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI 312 (456)
+.|+| |+..|.|..+..-+ +.++.|+-.|.+= . | -..++.|||++|+
T Consensus 137 v~l~P-G~~yP~HsHp~EEi--y~VLsG~~e~~v~---~--------g-------------------~~~~l~pGd~v~i 183 (217)
T 4b29_A 137 GYWGP-GLDYGWHEHLPEEL--YSVVSGRALFHLR---N--------A-------------------PDLMLEPGQTRFH 183 (217)
T ss_dssp EEECS-SCEEEEEECSSEEE--EEEEEECEEEEET---T--------S-------------------CCEEECTTCEEEE
T ss_pred EEECC-CCcCCCCCCCCceE--EEEEeCCEEEEEC---C--------C-------------------CEEecCCCCEEEc
Confidence 44444 56699999988877 8899998888771 0 1 1378999999999
Q ss_pred CCCCeEEEEeCCC-cEEEEee
Q psy12281 313 PSGWHHQVTNLEH-TISINHN 332 (456)
Q Consensus 313 PsgW~H~V~nl~~-sIsvn~~ 332 (456)
|+|=-|..++.++ .+++=.|
T Consensus 184 psgv~Ha~rt~dePllalwvW 204 (217)
T 4b29_A 184 PANAPHAMTTLTDPILTLVLW 204 (217)
T ss_dssp CTTCCEEEECCSSCEEEEEEE
T ss_pred CCCCceeEEECCccEEEEEEE
Confidence 9999999998776 4444443
No 92
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=90.26 E-value=0.88 Score=39.85 Aligned_cols=60 Identities=18% Similarity=0.121 Sum_probs=43.4
Q ss_pred eeeCCCCCccccccccc-CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 233 VYMGPKETWTPLHADVF-HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~-~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
+-+.+.+...+.|.... .-+ ..++.|+=...+ ..-+.++++||+++
T Consensus 48 ~~l~pG~~~~~~H~H~~~eE~--~~Vl~G~~~~~~-------------------------------~~~~~~l~~GD~i~ 94 (163)
T 3i7d_A 48 VRLEPGAKSSLRHYHMEQDEF--VMVTEGALVLVD-------------------------------DQGEHPMVPGDCAA 94 (163)
T ss_dssp EEECTTCBSSSSEEESSCCEE--EEEEESCEEEEE-------------------------------TTEEEEECTTCEEE
T ss_pred EEECCCCcCCCCccCCCCcEE--EEEEECEEEEEE-------------------------------CCEEEEeCCCCEEE
Confidence 34445443447888765 355 778888766554 01258999999999
Q ss_pred eCCC--CeEEEEeCCC
Q psy12281 312 VPSG--WHHQVTNLEH 325 (456)
Q Consensus 312 IPsg--W~H~V~nl~~ 325 (456)
||++ -.|++.|.++
T Consensus 95 ip~~~~~~H~~~n~~~ 110 (163)
T 3i7d_A 95 FPAGDPNGHQFVNRTD 110 (163)
T ss_dssp ECTTCCCCBEEECCSS
T ss_pred ECCCCCcceEEEECCC
Confidence 9999 9999999876
No 93
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=90.01 E-value=0.78 Score=38.52 Aligned_cols=54 Identities=22% Similarity=0.155 Sum_probs=39.7
Q ss_pred CCcccccccc-cCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCe
Q psy12281 239 ETWTPLHADV-FHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWH 317 (456)
Q Consensus 239 gs~T~lH~D~-~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~ 317 (456)
|..++.|... ..-+ ..++.|+=...+ ..-+..++|||++++|++-.
T Consensus 67 g~~~~~H~H~~~~E~--~~Vl~G~~~~~i-------------------------------~~~~~~l~~Gd~i~i~~~~~ 113 (133)
T 1o4t_A 67 GSSVGLHKHEGEFEI--YYILLGEGVFHD-------------------------------NGKDVPIKAGDVCFTDSGES 113 (133)
T ss_dssp TCEEEEEECCSEEEE--EEEEESEEEEEE-------------------------------TTEEEEEETTEEEEECTTCE
T ss_pred CCccCceECCCccEE--EEEEeCEEEEEE-------------------------------CCEEEEeCCCcEEEECCCCc
Confidence 4446778754 2344 677888766654 01257899999999999999
Q ss_pred EEEEeCCC
Q psy12281 318 HQVTNLEH 325 (456)
Q Consensus 318 H~V~nl~~ 325 (456)
|...|.++
T Consensus 114 H~~~n~~~ 121 (133)
T 1o4t_A 114 HSIENTGN 121 (133)
T ss_dssp EEEECCSS
T ss_pred EEeEECCC
Confidence 99999876
No 94
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=89.98 E-value=1.4 Score=39.23 Aligned_cols=26 Identities=23% Similarity=0.166 Sum_probs=23.4
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEeC-CC
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTNL-EH 325 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~nl-~~ 325 (456)
-+.+++|||.+|+|++-.|...|. ++
T Consensus 162 ~~~~l~~GD~~~~~~~~~H~~~n~~~~ 188 (198)
T 2bnm_A 162 KEALLPTGASMFVEEHVPHAFTAAKGT 188 (198)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESTTS
T ss_pred ccEEECCCCEEEeCCCCceEEEecCCC
Confidence 357899999999999999999998 54
No 95
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=89.83 E-value=0.32 Score=48.47 Aligned_cols=25 Identities=24% Similarity=0.239 Sum_probs=23.4
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+..+++||+++||+|.+|...|.++
T Consensus 140 ~~~l~~GD~~~iP~g~~H~~~n~~~ 164 (354)
T 2d40_A 140 RTPMNEGDFILTPQWRWHDHGNPGD 164 (354)
T ss_dssp EEECCTTCEEEECTTSCEEEECCSS
T ss_pred EEEEcCCCEEEECCCCcEEeEeCCC
Confidence 5789999999999999999999876
No 96
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=89.74 E-value=0.96 Score=43.36 Aligned_cols=75 Identities=13% Similarity=0.201 Sum_probs=59.7
Q ss_pred CccceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCC
Q psy12281 228 DDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAG 307 (456)
Q Consensus 228 ~~~~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pG 307 (456)
.+++-+.+|+..+.+.+|+|..+-+ +.|+.|.=+-.+... .+...+.+++|
T Consensus 30 ~~~~V~~vgGpN~R~d~H~~~~dE~--FyqlkG~m~l~~~d~---------------------------g~~~~V~i~eG 80 (286)
T 2qnk_A 30 EQLKVMFIGGPNTRKDYHIEEGEEV--FYQLEGDMVLRVLEQ---------------------------GKHRDVVIRQG 80 (286)
T ss_dssp SSEEEEEECSCBCCCCEEECSSCEE--EEEEESCEEEEEEET---------------------------TEEEEEEECTT
T ss_pred ccEEEEEEeCCCcCccCcCCCCCeE--EEEEeCeEEEEEEeC---------------------------CceeeEEECCC
Confidence 3567788999999999998877765 999999866665421 23457999999
Q ss_pred CEEEeCCCCeEEEEeCCCcEEEEe
Q psy12281 308 DSIFVPSGWHHQVTNLEHTISINH 331 (456)
Q Consensus 308 D~LfIPsgW~H~V~nl~~sIsvn~ 331 (456)
|+..+|+|=-|.....++|+.+-.
T Consensus 81 emfllP~gv~HsP~r~~et~gLvi 104 (286)
T 2qnk_A 81 EIFLLPARVPHSPQRFANTVGLVV 104 (286)
T ss_dssp EEEEECTTCCEEEEECTTCEEEEE
T ss_pred eEEEeCCCCCcCCcccCCeEEEEE
Confidence 999999999999998888766643
No 97
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=89.60 E-value=0.32 Score=39.34 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=42.0
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV 312 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI 312 (456)
+|-..+|. .++|.+. .-+ ..++.|+=++.+ +. .-+.+++|||+++|
T Consensus 35 ~~~~~pg~-~~~hH~~-~E~--~~Vl~G~~~~~i---~~---------------------------g~~~~l~~GD~i~i 80 (101)
T 1o5u_A 35 IWEKEVSE-FDWYYDT-NET--CYILEGKVEVTT---ED---------------------------GKKYVIEKGDLVTF 80 (101)
T ss_dssp EEEECSEE-EEEECSS-CEE--EEEEEEEEEEEE---TT---------------------------CCEEEEETTCEEEE
T ss_pred EEEeCCCc-ccccCCc-eEE--EEEEeCEEEEEE---CC---------------------------CCEEEECCCCEEEE
Confidence 55555665 3467443 333 788999877665 10 11478999999999
Q ss_pred CCCCeEEEEeCCC
Q psy12281 313 PSGWHHQVTNLEH 325 (456)
Q Consensus 313 PsgW~H~V~nl~~ 325 (456)
|+|..|...|.++
T Consensus 81 p~g~~H~~~n~~~ 93 (101)
T 1o5u_A 81 PKGLRCRWKVLEP 93 (101)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCcEEEEeCCC
Confidence 9999999999776
No 98
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=89.33 E-value=1.3 Score=43.94 Aligned_cols=82 Identities=13% Similarity=-0.006 Sum_probs=51.9
Q ss_pred eeCCCCCccc--ccccc-cCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEE
Q psy12281 234 YMGPKETWTP--LHADV-FHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSI 310 (456)
Q Consensus 234 ~iG~~gs~T~--lH~D~-~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~L 310 (456)
.+.+.+...+ +|+.. ..-+ ..++.|+=++.+=-.. ....+.+++|||++
T Consensus 53 ~~~p~g~~~~~~~H~H~~~~E~--~~Vl~G~~~~~v~~~~--------------------------g~~~~~~L~~GD~v 104 (350)
T 1juh_A 53 TNAPHSDALGVLPHIHQKHYEN--FYCNKGSFQLWAQSGN--------------------------ETQQTRVLSSGDYG 104 (350)
T ss_dssp EEECCCSSCSSCCEECSSCEEE--EEEEESEEEEEEEETT--------------------------SCCEEEEEETTCEE
T ss_pred EEcCCCCCCCCccccCCCceEE--EEEEEEEEEEEECCcC--------------------------CceEEEEECCCCEE
Confidence 3445555455 77765 3344 6789999777762210 11236789999999
Q ss_pred EeCCCCeEEEEeCCCcEEEEeecCCCCCHHHHHH
Q psy12281 311 FVPSGWHHQVTNLEHTISINHNWINGTNIDHVYH 344 (456)
Q Consensus 311 fIPsgW~H~V~nl~~sIsvn~~~~~~~nl~~~~~ 344 (456)
+||++-.|...|.++.- .-.+.+.+..+..++.
T Consensus 105 ~ip~g~~H~~~n~~~~~-~~l~v~~p~~~~~~f~ 137 (350)
T 1juh_A 105 SVPRNVTHTFQIQDPDT-EMTGVIVPGGFEDLFY 137 (350)
T ss_dssp EECTTEEEEEEECSTTE-EEEEEEESSCTTHHHH
T ss_pred EECCCCcEEEEeCCCCC-EEEEEEcCccHHHHHH
Confidence 99999999999998743 2233334444444433
No 99
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=89.14 E-value=0.68 Score=43.32 Aligned_cols=56 Identities=18% Similarity=0.166 Sum_probs=43.3
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE-eCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF-VPSG 315 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf-IPsg 315 (456)
++|+..+.|......+ ..++.|+=.+.+ + .-+.++.|||.+| ||+|
T Consensus 42 ~pg~~~~~H~H~~~e~--~~Vl~G~~~~~~---~----------------------------~~~~~l~~Gd~i~~ip~~ 88 (243)
T 3h7j_A 42 PPHTNVEPHQHKEVQI--GMVVSGELMMTV---G----------------------------DVTRKMTALESAYIAPPH 88 (243)
T ss_dssp CTTEEEEEECCSSEEE--EEEEESEEEEEE---T----------------------------TEEEEEETTTCEEEECTT
T ss_pred CCCCccCCEECCCcEE--EEEEEeEEEEEE---C----------------------------CEEEEECCCCEEEEcCCC
Confidence 4566678888776555 778888766655 1 1257899999997 9999
Q ss_pred CeEEEEeCCC
Q psy12281 316 WHHQVTNLEH 325 (456)
Q Consensus 316 W~H~V~nl~~ 325 (456)
-.|.+.|.++
T Consensus 89 ~~H~~~n~~~ 98 (243)
T 3h7j_A 89 VPHGARNDTD 98 (243)
T ss_dssp CCEEEEECSS
T ss_pred CcEeeEeCCC
Confidence 9999999987
No 100
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=88.65 E-value=0.37 Score=42.20 Aligned_cols=31 Identities=26% Similarity=0.320 Sum_probs=25.7
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCCcEEEEe
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEHTISINH 331 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~ 331 (456)
+.+++|||++|||+|..|...|.+.+..+..
T Consensus 103 ~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V 133 (151)
T 4axo_A 103 KVSASSGELIFIPKGSKIQFSVPDYARFIYV 133 (151)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCEEEEEeCCCEEEEEE
Confidence 5889999999999999999999865544443
No 101
>2e2z_A TIM15; protein import, zinc finger, protein transport, chaperone regulator; NMR {Saccharomyces cerevisiae}
Probab=88.35 E-value=0.33 Score=39.20 Aligned_cols=37 Identities=19% Similarity=0.571 Sum_probs=31.8
Q ss_pred ceEEEec-CCCC--cEEeehhhhhcCCcEEeCCCCcceEE
Q psy12281 20 ETYYYPC-PCGD--RFQITKEQLKAGEDVATCPTCSLIIK 56 (456)
Q Consensus 20 ~~~~~~C-rCg~--~f~i~~~~l~~~~~~~~C~~CSl~i~ 56 (456)
-...|.| .|+. .-.|++..-+.|..+|+|++|.-+=.
T Consensus 10 ~~l~FTC~~C~tRs~k~iSk~aY~~GvViv~C~gC~n~Hl 49 (100)
T 2e2z_A 10 MMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHL 49 (100)
T ss_dssp EEEEEEETTTTEEEEEEEEHHHHHTSEEEEECTTTCCEEE
T ss_pred EEEEEEccCCCCcchhhcCHHHhhCCEEEEEcCCCccceE
Confidence 3478899 7995 89999999999999999999987543
No 102
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=88.20 E-value=1.3 Score=45.62 Aligned_cols=89 Identities=13% Similarity=0.012 Sum_probs=54.1
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccC-------------CCcccCCCCCCc
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDM-------------RSVDWSTLPRDT 298 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~-------------~~pd~~~fp~~~ 298 (456)
.+-|.|.|- .++|+. ...-|..++.|+=+..++-|+... .|...... ..- ....-+++...+
T Consensus 54 R~~i~P~gl-~~Ph~h--~a~ei~yV~qG~g~~g~v~pgc~e-tf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~h 128 (465)
T 3qac_A 54 RRTIEPHGL-LLPSFT--SAPELIYIEQGNGITGMMIPGCPE-TYESGSQQ-FQGGEDERIREQGSRKFGMRGDRFQDQH 128 (465)
T ss_dssp EEEECTTEE-EEEEEE--SSCEEEEEEECEEEEEEECTTCCC-CC-------------------------------CCCC
T ss_pred EEEEcCCcC-cccEEc--CCCEEEEEEECcEEEEEecCCCCc-eeecchhc-cccccccccccccccccccccccccccc
Confidence 356677554 888887 344568999999999999886532 22100000 000 000000111122
Q ss_pred eEEEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 299 VIIVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 299 ~~~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
-....+++||+++||+|--|..+|.++
T Consensus 129 qk~~~~~~GDvi~iPaG~~hw~~N~G~ 155 (465)
T 3qac_A 129 QKIRHLREGDIFAMPAGVSHWAYNNGD 155 (465)
T ss_dssp CCEEEEETTEEEEECTTCEEEEECCSS
T ss_pred cceeeecCCCEEEECCCCeEEEEcCCC
Confidence 335788999999999999999999987
No 103
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=88.13 E-value=1.1 Score=41.55 Aligned_cols=57 Identities=16% Similarity=0.100 Sum_probs=42.5
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGW 316 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW 316 (456)
++|...+.|..+...+ ..++.|+=+..+ ..-+..++|||.++||++-
T Consensus 161 ~~G~~~~~H~H~~~e~--~~Vl~G~~~~~i-------------------------------~g~~~~l~~Gd~i~ip~~~ 207 (227)
T 3rns_A 161 WKGESLDPHKAPGDAL--VTVLDGEGKYYV-------------------------------DGKPFIVKKGESAVLPANI 207 (227)
T ss_dssp CTTCEEEEECCSSEEE--EEEEEEEEEEEE-------------------------------TTEEEEEETTEEEEECTTS
T ss_pred CCCCccCCEECCCcEE--EEEEeEEEEEEE-------------------------------CCEEEEECCCCEEEECCCC
Confidence 4455577887665544 777888766554 0125789999999999999
Q ss_pred eEEEEe-CCCc
Q psy12281 317 HHQVTN-LEHT 326 (456)
Q Consensus 317 ~H~V~n-l~~s 326 (456)
.|.+.| .+++
T Consensus 208 ~H~~~~~~~~~ 218 (227)
T 3rns_A 208 PHAVEAETENF 218 (227)
T ss_dssp CEEEECCSSCE
T ss_pred cEEEEeCCCCE
Confidence 999999 8774
No 104
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=88.03 E-value=0.35 Score=37.96 Aligned_cols=28 Identities=21% Similarity=0.329 Sum_probs=24.0
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCCcEE
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEHTIS 328 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~sIs 328 (456)
+..+.|||+++||+|-.|...|.+++..
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 96 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAKEECKI 96 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcCCCCEE
Confidence 5789999999999999999999865433
No 105
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=87.99 E-value=1.5 Score=38.90 Aligned_cols=28 Identities=11% Similarity=0.064 Sum_probs=25.0
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCCcEE
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEHTIS 328 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~sIs 328 (456)
+.++.|||.+|||++=.|..+|..+.-+
T Consensus 129 ~~~L~~Gds~~iP~g~~H~~~N~~d~~A 156 (166)
T 2vpv_A 129 KFLSVKGSTFQIPAFNEYAIANRGNDEA 156 (166)
T ss_dssp EEEEETTCEEEECTTCEEEEEECSSSCE
T ss_pred EEEEcCCCEEEECCCCCEEEEECCCCCE
Confidence 5789999999999999999999988543
No 106
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=87.95 E-value=1.1 Score=46.46 Aligned_cols=88 Identities=16% Similarity=0.077 Sum_probs=52.9
Q ss_pred ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEE
Q psy12281 231 RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSI 310 (456)
Q Consensus 231 ~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~L 310 (456)
..+-|.|.| ..++|+-... -|..++.|+=+..+.-|+...-+.... . .. ....-.++....-....+++||++
T Consensus 51 ~r~~l~Pgg-l~~Ph~~~a~--ei~yV~~G~g~~g~v~pg~~et~~~~~-~--~~-~~~~~~~~~d~~qk~~~l~~GDvi 123 (476)
T 1fxz_A 51 SRCTLNRNA-LRRPSYTNGP--QEIYIQQGKGIFGMIYPGCPSTFEEPQ-Q--PQ-QRGQSSRPQDRHQKIYNFREGDLI 123 (476)
T ss_dssp EEEEECTTE-EEEEEEESSC--EEEEEEECCEEEEEECTTCCCC----------------------CCCCEEEECTTEEE
T ss_pred EEEEEcCCC-EecceecCCc--eEEEEEecEEEEEEEcCCCcchhhccc-c--cc-ccccccccccccceEEEEeCCCEE
Confidence 345677755 4767765433 468999999999999887543211000 0 00 000000000011235689999999
Q ss_pred EeCCCCeEEEEeCCC
Q psy12281 311 FVPSGWHHQVTNLEH 325 (456)
Q Consensus 311 fIPsgW~H~V~nl~~ 325 (456)
+||+|-.|...|.++
T Consensus 124 ~iPaG~~h~~~N~G~ 138 (476)
T 1fxz_A 124 AVPTGVAWWMYNNED 138 (476)
T ss_dssp EECTTCEEEEEECSS
T ss_pred EECCCCcEEEEeCCC
Confidence 999999999999987
No 107
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=87.76 E-value=1.8 Score=39.01 Aligned_cols=80 Identities=18% Similarity=0.138 Sum_probs=46.8
Q ss_pred eCCCCCccccccc-ccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC--CCEEE
Q psy12281 235 MGPKETWTPLHAD-VFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA--GDSIF 311 (456)
Q Consensus 235 iG~~gs~T~lH~D-~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p--GD~Lf 311 (456)
.+.+|..-.+|+. +...--+..++.|+=.-+++. ++. +...| .+...++|.+ +..||
T Consensus 54 ~s~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD-----------------~R~-~SpTf--g~~~~~~Ls~~n~~~L~ 113 (185)
T 1ep0_A 54 MSVRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVD-----------------LRK-NSDTY--GEWTGVRLSDENRREFF 113 (185)
T ss_dssp EEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEE-----------------CCT-TCTTT--TCEEEEEEETTTCCEEE
T ss_pred eCcCCeEecceecCCccccEEEEEeCCeEEEEEEE-----------------CCC-CCCCC--CeEEEEEecCCCCCEEE
Confidence 3446777788877 111122356677763333322 211 11111 3455666654 69999
Q ss_pred eCCCCeEEEEeCCCcEEEEeecCC
Q psy12281 312 VPSGWHHQVTNLEHTISINHNWIN 335 (456)
Q Consensus 312 IPsgW~H~V~nl~~sIsvn~~~~~ 335 (456)
||.|+||...++++. ++-..+++
T Consensus 114 IP~G~aHgf~~lsd~-a~~~y~~s 136 (185)
T 1ep0_A 114 IPEGFAHGFLALSDE-CIVNYKCT 136 (185)
T ss_dssp ECTTEEEEEEECSSE-EEEEEEES
T ss_pred eCCCeEEEEEEcCCC-eEEEEecC
Confidence 999999999999997 44443443
No 108
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=87.47 E-value=1.9 Score=36.81 Aligned_cols=60 Identities=15% Similarity=0.076 Sum_probs=43.6
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV 312 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI 312 (456)
+.+. +|..++.|.....-+ ..++.|+=+..+ .+ +. ...+.|||+++|
T Consensus 53 ~~~~-pg~~~~~H~H~~~E~--~~Vl~G~~~~~~------------~~-----------------~~-~~~l~~Gd~i~i 99 (147)
T 2f4p_A 53 VVFE-PGARTHWHSHPGGQI--LIVTRGKGFYQE------------RG-----------------KP-ARILKKGDVVEI 99 (147)
T ss_dssp EEEC-TTCEECSEECTTCEE--EEEEEEEEEEEE------------TT-----------------SC-CEEEETTCEEEE
T ss_pred EEEC-CCCccCceECCCceE--EEEEeCEEEEEE------------CC-----------------EE-EEEECCCCEEEE
Confidence 3444 455578888776555 778899876654 00 00 167999999999
Q ss_pred CCCCeEEEEeCCC
Q psy12281 313 PSGWHHQVTNLEH 325 (456)
Q Consensus 313 PsgW~H~V~nl~~ 325 (456)
|++=.|...|.++
T Consensus 100 p~~~~H~~~n~~~ 112 (147)
T 2f4p_A 100 PPNVVHWHGAAPD 112 (147)
T ss_dssp CTTCCEEEEEBTT
T ss_pred CCCCcEEeEeCCC
Confidence 9999999999876
No 109
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=87.44 E-value=0.96 Score=46.71 Aligned_cols=86 Identities=16% Similarity=0.115 Sum_probs=53.0
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-|.|.| ..++|+-. ..-|..++.|+=+..+.-|+......... . ..-.. -..+...+-..-.+++||+++
T Consensus 67 r~~i~pgg-l~~Ph~h~--a~ei~yVl~G~g~vg~v~p~~~~tf~~~~-~--~~~~~--~~~~~d~~q~~~~l~~GDv~~ 138 (459)
T 2e9q_A 67 RHTIRPKG-LLLPGFSN--APKLIFVAQGFGIRGIAIPGCAETYQTDL-R--RSQSA--GSAFKDQHQKIRPFREGDLLV 138 (459)
T ss_dssp EEEECTTE-EEEEEEES--SCEEEEEEECEEEEEECCTTCCCCEEECC-C-----------CCCEEECCCEEEETTEEEE
T ss_pred EEEEcCCC-EecceecC--CceEEEEEeeEEEEEEEeCCCcchhccch-h--hcccc--ccccccccceeEEecCCCEEE
Confidence 35666655 47777754 33569999999999999777533221100 0 00000 000000111235899999999
Q ss_pred eCCCCeEEEEeCCC
Q psy12281 312 VPSGWHHQVTNLEH 325 (456)
Q Consensus 312 IPsgW~H~V~nl~~ 325 (456)
||+|-.|...|.++
T Consensus 139 iPaG~~H~~~N~g~ 152 (459)
T 2e9q_A 139 VPAGVSHWMYNRGQ 152 (459)
T ss_dssp ECTTCCEEEEECSS
T ss_pred ECCCCCEEEEeCCC
Confidence 99999999999987
No 110
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=87.37 E-value=0.48 Score=39.36 Aligned_cols=54 Identities=19% Similarity=0.052 Sum_probs=39.1
Q ss_pred CCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCeE
Q psy12281 239 ETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHH 318 (456)
Q Consensus 239 gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~H 318 (456)
|..++.|......+ ..++.|+=+..+ ..-+..+.|||++++|+|-.|
T Consensus 58 g~~~~~H~H~~~e~--~~Vl~G~~~~~i-------------------------------~~~~~~l~~Gd~i~ip~g~~H 104 (126)
T 1vj2_A 58 GGLIDRHSHPWEHE--IFVLKGKLTVLK-------------------------------EQGEETVEEGFYIFVEPNEIH 104 (126)
T ss_dssp EEEEEEECCSSCEE--EEEEESEEEEEC-------------------------------SSCEEEEETTEEEEECTTCCE
T ss_pred CCcCCceeCCCcEE--EEEEEeEEEEEE-------------------------------CCEEEEECCCCEEEECCCCcE
Confidence 44466777665544 667777755543 011478999999999999999
Q ss_pred EEEeCCC
Q psy12281 319 QVTNLEH 325 (456)
Q Consensus 319 ~V~nl~~ 325 (456)
...|.++
T Consensus 105 ~~~~~~~ 111 (126)
T 1vj2_A 105 GFRNDTD 111 (126)
T ss_dssp EEECCSS
T ss_pred EeEeCCC
Confidence 9999875
No 111
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=87.36 E-value=0.55 Score=43.93 Aligned_cols=25 Identities=24% Similarity=0.268 Sum_probs=23.3
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+.+++|||++++|++-.|++.|.++
T Consensus 185 ~~~l~~Gd~i~ip~~~~H~~~n~~~ 209 (243)
T 3h7j_A 185 TVEMKFGTAYFCEPREDHGAINRSE 209 (243)
T ss_dssp EEEECTTCEEEECTTCCEEEEECSS
T ss_pred EEEECCCCEEEECCCCcEEeEeCCC
Confidence 5789999999999999999999966
No 112
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=87.32 E-value=2 Score=38.77 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=47.1
Q ss_pred eCCCCCccccccc-ccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC--CCEEE
Q psy12281 235 MGPKETWTPLHAD-VFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA--GDSIF 311 (456)
Q Consensus 235 iG~~gs~T~lH~D-~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p--GD~Lf 311 (456)
.+.+|..-.+|+. +...--+..++.|+=.-+++.-.. | +|. | .+...++|.+ +..||
T Consensus 55 ~s~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~--------~-------SpT---f--g~~~~~~Ls~~n~~~L~ 114 (184)
T 2ixk_A 55 RSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRR--------G-------SPT---F--GQWVGERLSAENKRQMW 114 (184)
T ss_dssp EEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBT--------T-------STT---T--TCEEEEEEETTTCCEEE
T ss_pred eCCCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCC--------C-------CCC---C--CeEEEEEeCCCcCCEEE
Confidence 4456887888887 111122366677773333321110 0 111 1 3455666665 68999
Q ss_pred eCCCCeEEEEeCCCcEEEEeecCC
Q psy12281 312 VPSGWHHQVTNLEHTISINHNWIN 335 (456)
Q Consensus 312 IPsgW~H~V~nl~~sIsvn~~~~~ 335 (456)
||.|+||...++++. ++-..+++
T Consensus 115 IP~G~aHgf~~lsd~-a~~~y~~s 137 (184)
T 2ixk_A 115 IPAGFAHGFVVLSEY-AEFLYKTT 137 (184)
T ss_dssp ECTTEEEEEEECSSE-EEEEEEES
T ss_pred eCCCeEEEEEEcCCC-EEEEEeCC
Confidence 999999999999996 44443444
No 113
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=87.22 E-value=1.2 Score=39.78 Aligned_cols=27 Identities=19% Similarity=0.126 Sum_probs=24.1
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCCcE
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEHTI 327 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~sI 327 (456)
+..++|||++|+|++=.|...|.++.-
T Consensus 145 ~~~l~~GD~i~i~~~~~H~~~n~~~~~ 171 (192)
T 1y9q_A 145 WHELQQGEHIRFFSDQPHGYAAVTEKA 171 (192)
T ss_dssp EEEECTTCEEEEECSSSEEEEESSSCE
T ss_pred EEEeCCCCEEEEcCCCCeEeECCCCCc
Confidence 578999999999999999999997743
No 114
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=87.09 E-value=3.4 Score=37.38 Aligned_cols=56 Identities=23% Similarity=0.211 Sum_probs=43.0
Q ss_pred ccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCeEEEE
Q psy12281 242 TPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVT 321 (456)
Q Consensus 242 T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~H~V~ 321 (456)
.+.|.....-+ ...+.|+=.+.+-... .+.+++.++|||+|+||+|=.|...
T Consensus 97 ~~~H~H~~~Ei--~yVleG~G~f~i~d~~--------------------------d~~~~i~v~~GDlIiIPaG~~H~f~ 148 (191)
T 1vr3_A 97 FEEHLHLDEEI--RYILEGSGYFDVRDKE--------------------------DKWIRISMEKGDMITLPAGIYHRFT 148 (191)
T ss_dssp HSCEECSSCEE--EEEEEEEEEEEEECTT--------------------------SCEEEEEEETTEEEEECTTCCEEEE
T ss_pred CcceECCcceE--EEEEeceEEEEECCCC--------------------------CeEEEEEECCCCEEEECcCCcCCcc
Confidence 36787776666 7889998777763210 2356789999999999999999998
Q ss_pred eCCC
Q psy12281 322 NLEH 325 (456)
Q Consensus 322 nl~~ 325 (456)
+.++
T Consensus 149 ~~~~ 152 (191)
T 1vr3_A 149 LDEK 152 (191)
T ss_dssp ECTT
T ss_pred cCCC
Confidence 8766
No 115
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=86.98 E-value=0.64 Score=36.98 Aligned_cols=27 Identities=15% Similarity=0.268 Sum_probs=24.3
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCCcE
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEHTI 327 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~sI 327 (456)
+..++|||+++||+|-.|...|.+++.
T Consensus 75 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 101 (110)
T 2q30_A 75 VIPAPRGAVLVAPISTPHGVRAVTDMK 101 (110)
T ss_dssp EEEECTTEEEEEETTSCEEEEESSSEE
T ss_pred EEEECCCCEEEeCCCCcEEEEEcCCcE
Confidence 578999999999999999999998743
No 116
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=86.74 E-value=1.3 Score=45.10 Aligned_cols=64 Identities=20% Similarity=0.226 Sum_probs=47.5
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+-+.|.|...|-|.| ......++.|+=+..++.|+. .....+++||+++
T Consensus 48 ~~~l~p~gl~~Phh~~---A~ei~yV~~G~g~~g~V~~~~---------------------------~~~~~l~~GDv~~ 97 (418)
T 3s7i_A 48 QIEAKPNTLVLPKHAD---ADNILVIQQGQATVTVANGNN---------------------------RKSFNLDEGHALR 97 (418)
T ss_dssp EEEECTTEEEEEEEES---EEEEEEEEESEEEEEEECSSC---------------------------EEEEEEETTEEEE
T ss_pred EEEecCCceeeeeeCC---CCeEEEEEEeeEEEEEEecCC---------------------------EEEEEecCCCEEE
Confidence 3566776665555544 333468899998888887642 1246899999999
Q ss_pred eCCCCeEEEEeCCC
Q psy12281 312 VPSGWHHQVTNLEH 325 (456)
Q Consensus 312 IPsgW~H~V~nl~~ 325 (456)
||+|.-|...|.++
T Consensus 98 ~P~G~~h~~~N~g~ 111 (418)
T 3s7i_A 98 IPSGFISYILNRHD 111 (418)
T ss_dssp ECTTCEEEEEECCS
T ss_pred ECCCCeEEEEecCC
Confidence 99999999999865
No 117
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=85.30 E-value=1.8 Score=44.01 Aligned_cols=88 Identities=11% Similarity=0.004 Sum_probs=54.8
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCcc-ccCCC-cccCCCC-CCceEEEEEcCCC
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLI-SDMRS-VDWSTLP-RDTVIIVEQEAGD 308 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p-~d~~~-pd~~~fp-~~~~~~~~l~pGD 308 (456)
.+-+.+.| ..++|+.+.. ..|..++.|+=+..++.|+.... .+..- -.-.. ..-++.. +.+.+...+++||
T Consensus 267 r~~l~pgg-~~~PH~~p~A-~ei~yV~~G~g~v~vv~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD 340 (418)
T 3s7i_A 267 CVEIKEGA-LMLPHFNSKA-MVIVVVNKGTGNLELVAVRKEQQ----QRGRREEEEDEDEEEEGSNREVRRYTARLKEGD 340 (418)
T ss_dssp EEEECTTE-EEEEEEESSC-EEEEEEEECCEEEEEEEEEEC-----------------------CCEEEEEEEEEECTTC
T ss_pred EEEecCCc-eeCceecCCC-CEEEEEEeCeEEEEEEeCCCccc----cccccccccccccccccccccceEEEeeeCCCC
Confidence 35566644 5899997754 45899999999999997753210 00000 00000 0000000 1256788999999
Q ss_pred EEEeCCCCeEEEEeCCC
Q psy12281 309 SIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 309 ~LfIPsgW~H~V~nl~~ 325 (456)
+++||.|..|...|.++
T Consensus 341 V~vvP~G~~~~~~~~~~ 357 (418)
T 3s7i_A 341 VFIMPAAHPVAINASSE 357 (418)
T ss_dssp EEEECTTCCEEEEESSC
T ss_pred EEEECCCCEEEEECCCC
Confidence 99999999999999776
No 118
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=85.24 E-value=1.7 Score=45.24 Aligned_cols=90 Identities=14% Similarity=0.127 Sum_probs=53.2
Q ss_pred ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCc-ccCCCCCCceEEEEEcCCCE
Q psy12281 231 RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSV-DWSTLPRDTVIIVEQEAGDS 309 (456)
Q Consensus 231 ~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~p-d~~~fp~~~~~~~~l~pGD~ 309 (456)
..+-|-|.|- ..+|+-... -|..++.|+=+..+.-|+...-....... ..-... .-..+....-....+++||+
T Consensus 48 ~r~~i~pggl-~~Ph~~~~~--~i~yV~~G~g~vg~v~pgc~et~~~~~~~--~~~~~~~~~~~~~d~~qkv~~l~~GDv 122 (493)
T 2d5f_A 48 SKRTLNRNGL-HLPSYSPYP--QMIIVVQGKGAIGFAFPGCPETFEKPQQQ--SSRRGSRSQQQLQDSHQKIRHFNEGDV 122 (493)
T ss_dssp EEEEECTTEE-EEEEECSSC--EEEEEEECEEEEEECCTTCCCCEEECC---------------CSEEESCEEEEETTEE
T ss_pred EEEEeCCCcE-eCceecCCC--eEEEEEeCEEEEEEEeCCCcccccccccc--ccccccccccccccccceEEEecCCCE
Confidence 4456666554 677776543 46899999999999988764321110000 000000 00000000011338999999
Q ss_pred EEeCCCCeEEEEeCCC
Q psy12281 310 IFVPSGWHHQVTNLEH 325 (456)
Q Consensus 310 LfIPsgW~H~V~nl~~ 325 (456)
++||+|-.|...|.++
T Consensus 123 i~iPaG~~h~~~N~g~ 138 (493)
T 2d5f_A 123 LVIPPGVPYWTYNTGD 138 (493)
T ss_dssp EEECTTCCEEEEECSS
T ss_pred EEECCCCcEEEEeCCC
Confidence 9999999999999987
No 119
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=85.09 E-value=0.68 Score=37.00 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=23.1
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCCc
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEHT 326 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~s 326 (456)
+..+.|||+++||+|=.|...|.+++
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~~~ 93 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHRPRSENGC 93 (107)
T ss_dssp EEEECTTEEEEECTTCCEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEeeEeCCCe
Confidence 57899999999999999999996554
No 120
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=85.05 E-value=3.1 Score=37.41 Aligned_cols=72 Identities=15% Similarity=0.130 Sum_probs=44.7
Q ss_pred eCCCCCcccccccc--cCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC--CCEE
Q psy12281 235 MGPKETWTPLHADV--FHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA--GDSI 310 (456)
Q Consensus 235 iG~~gs~T~lH~D~--~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p--GD~L 310 (456)
.+.+|..-.+|+.. ...--+..++.|+=.-+++.-.. .+|. | .+...++|.+ +..|
T Consensus 53 ~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~---------------~SpT---f--g~~~~~~Ls~~n~~~L 112 (183)
T 1dzr_A 53 KSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRK---------------ESPT---F--GQWVGVNLSAENKRQL 112 (183)
T ss_dssp EEETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCT---------------TCTT---T--TCEEEEEEETTTCCEE
T ss_pred eCCCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCC---------------CCCC---C--CeEEEEEecCCCCCEE
Confidence 44568878888874 12222366778874333332111 0111 1 3455666655 6899
Q ss_pred EeCCCCeEEEEeCCCc
Q psy12281 311 FVPSGWHHQVTNLEHT 326 (456)
Q Consensus 311 fIPsgW~H~V~nl~~s 326 (456)
|||.|+||...++++.
T Consensus 113 ~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 113 WIPEGFAHGFVTLSEY 128 (183)
T ss_dssp EECTTEEEEEEECSSE
T ss_pred EeCCCeEEEEEEcCCC
Confidence 9999999999999986
No 121
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=84.69 E-value=5.1 Score=36.41 Aligned_cols=77 Identities=18% Similarity=0.174 Sum_probs=48.0
Q ss_pred eCCCCCccccccccc--CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEc--CCCEE
Q psy12281 235 MGPKETWTPLHADVF--HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQE--AGDSI 310 (456)
Q Consensus 235 iG~~gs~T~lH~D~~--~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~--pGD~L 310 (456)
.+.+|..-.+|+... ..--+..++.|+=.-+++.-... +|.+ .+...++|. ++..|
T Consensus 71 ~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~---------------SpTf-----G~~~~v~Ls~en~~~L 130 (196)
T 1wlt_A 71 FSRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKS---------------SPTF-----GKYVKAELNEENHYML 130 (196)
T ss_dssp EECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTT---------------STTT-----TCEEEEEEETTTCCEE
T ss_pred ECCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCC---------------CCCC-----CeEEEEEecCCCCCEE
Confidence 456788788888753 22222566777654444322111 1111 345566666 57999
Q ss_pred EeCCCCeEEEEeCCCcEEEEe
Q psy12281 311 FVPSGWHHQVTNLEHTISINH 331 (456)
Q Consensus 311 fIPsgW~H~V~nl~~sIsvn~ 331 (456)
|||.|+||...++++.-.+.+
T Consensus 131 ~IP~G~aHgf~~lsd~a~~ly 151 (196)
T 1wlt_A 131 WIPPGFAHGFQALEDSIVIYF 151 (196)
T ss_dssp EECTTEEEEEEESSSEEEEEE
T ss_pred EeCCCeEEEEEEcCCCeEEEE
Confidence 999999999999999544444
No 122
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=84.27 E-value=2.5 Score=41.85 Aligned_cols=57 Identities=16% Similarity=0.021 Sum_probs=41.6
Q ss_pred CCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCe
Q psy12281 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWH 317 (456)
Q Consensus 238 ~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~ 317 (456)
+|...+.|.-..+-. ..++.|+=++.+= |. -+.++++||++|||+|-.
T Consensus 261 ~g~~~~~h~~~~~~~--~~vleG~~~i~i~------------g~------------------~~~~l~~Gd~~~iPag~~ 308 (350)
T 1juh_A 261 STVTVPTWSFPGACA--FQVQEGRVVVQIG------------DY------------------AATELGSGDVAFIPGGVE 308 (350)
T ss_dssp TTSCCCCBCCSSCEE--EEEEESCEEEEET------------TS------------------CCEEECTTCEEEECTTCC
T ss_pred CCCCCCcccCCCcEE--EEEEeeEEEEEEC------------Ce------------------EEEEeCCCCEEEECCCCC
Confidence 355566775555555 6777777666661 10 147999999999999999
Q ss_pred EEEEeCCCc
Q psy12281 318 HQVTNLEHT 326 (456)
Q Consensus 318 H~V~nl~~s 326 (456)
|++.+.++.
T Consensus 309 h~~~~~~~~ 317 (350)
T 1juh_A 309 FKYYSEAYF 317 (350)
T ss_dssp EEEEESSSS
T ss_pred EEEEecCCe
Confidence 999998874
No 123
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=83.56 E-value=0.46 Score=38.19 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=23.3
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+..++|||++|+|+|-.|.+.|.++
T Consensus 60 ~~~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 60 LAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEEECSS
T ss_pred EEEECCCCEEEECCCCceeCEECCC
Confidence 4689999999999999999999987
No 124
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=83.45 E-value=7 Score=33.50 Aligned_cols=66 Identities=12% Similarity=0.112 Sum_probs=45.3
Q ss_pred CCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC-CCEEEeCCC
Q psy12281 237 PKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA-GDSIFVPSG 315 (456)
Q Consensus 237 ~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p-GD~LfIPsg 315 (456)
++|+.-.+|+..... -+.+.+.|+=+++|..... .-+++|.+ --.|+||+|
T Consensus 43 ~~g~~RG~H~Hk~~~-q~li~l~Gs~~v~ldDg~~---------------------------~~~~~L~~~~~gL~Ippg 94 (141)
T 2pa7_A 43 KGEEPRGFHAHKKLE-QVLVCLNGSCRVILDDGNI---------------------------IQEITLDSPAVGLYVGPA 94 (141)
T ss_dssp CSSCCEEEEEESSCC-EEEEEEESCEEEEEECSSC---------------------------EEEEEECCTTEEEEECTT
T ss_pred CCCCEECcCcCCCce-EEEEEEccEEEEEEECCcE---------------------------EEEEEECCCCcEEEeCCC
Confidence 377778888765433 4578899999999843221 12344433 336999999
Q ss_pred CeEEEEeCCC-cEEEE
Q psy12281 316 WHHQVTNLEH-TISIN 330 (456)
Q Consensus 316 W~H~V~nl~~-sIsvn 330 (456)
-||...++++ +|-++
T Consensus 95 vWh~~~~~s~~avllv 110 (141)
T 2pa7_A 95 VWHEMHDFSSDCVMMV 110 (141)
T ss_dssp CEEEEECCCTTCEEEE
T ss_pred EEEEEEEcCCCeEEEE
Confidence 9999999987 44444
No 125
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=83.39 E-value=7.9 Score=35.37 Aligned_cols=75 Identities=15% Similarity=0.057 Sum_probs=47.1
Q ss_pred CCCCccccccccc--CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC--CCEEEe
Q psy12281 237 PKETWTPLHADVF--HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA--GDSIFV 312 (456)
Q Consensus 237 ~~gs~T~lH~D~~--~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p--GD~LfI 312 (456)
.+|+.-.+|+... ..--+..++.|+=.=+++.-... +|. | .+...++|.+ +-.|||
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~---------------SpT---f--g~~~~~~Ls~~n~~~L~I 137 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKD---------------SPT---F--KQWRGYILSADNHRQLLV 137 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTT---------------STT---T--TCEEEEEEETTTCCEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCC---------------CCC---C--CeEEEEEecCCCCCEEEe
Confidence 6788888998742 22223677777733333221110 111 1 3456677764 899999
Q ss_pred CCCCeEEEEeCCCcEEEEe
Q psy12281 313 PSGWHHQVTNLEHTISINH 331 (456)
Q Consensus 313 PsgW~H~V~nl~~sIsvn~ 331 (456)
|.|+||...++++.--+.+
T Consensus 138 P~G~aHGF~~Lsd~a~~~Y 156 (205)
T 3ryk_A 138 PKGFAHGFCTLVPHTIVMY 156 (205)
T ss_dssp CTTEEEEEEECSSSEEEEE
T ss_pred CCCceEEEEEcCCCEEEEE
Confidence 9999999999998544444
No 126
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=82.97 E-value=5.6 Score=33.15 Aligned_cols=61 Identities=18% Similarity=0.245 Sum_probs=43.6
Q ss_pred CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEE
Q psy12281 250 HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISI 329 (456)
Q Consensus 250 ~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsv 329 (456)
++.+...++.|+=+++.+..+... ...-++.+.+|+.-+||+.-||.|. +.+-+.+
T Consensus 37 GtWgkL~Vl~G~Lkf~~~~e~~~~-----------------------~~~~~~~~~~~~~~~i~Pq~wHrVe-~sdD~~f 92 (119)
T 3dl3_A 37 DVFGQICVMEGVVTYYGFANSEAT-----------------------EPEIKVVINAGQFATSPPQYWHRIE-LSDDAQF 92 (119)
T ss_dssp TEEEEEEEEESEEEEEEESSTTCC-----------------------SCSEEEEEETTEEEEECTTCEEEEE-ECTTCEE
T ss_pred cEEEEEEEEEeEEEEEEEcCCCCC-----------------------cccEEEEeCCCCCceeCCCceEEEE-ECCCeEE
Confidence 345557889999999987654321 1124678899999999999999999 6664444
Q ss_pred EeecC
Q psy12281 330 NHNWI 334 (456)
Q Consensus 330 n~~~~ 334 (456)
+..|.
T Consensus 93 ~leFy 97 (119)
T 3dl3_A 93 NINFW 97 (119)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 127
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=82.70 E-value=7.5 Score=36.08 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=45.9
Q ss_pred eeCCCCCccccccccc--CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC--CCE
Q psy12281 234 YMGPKETWTPLHADVF--HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA--GDS 309 (456)
Q Consensus 234 ~iG~~gs~T~lH~D~~--~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p--GD~ 309 (456)
-.+.+|..-.+|+... ..--+..++.|+=.-+++.-... +|.+ .+...++|.+ +..
T Consensus 71 S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~---------------SpTf-----G~~~~v~Ls~~n~~~ 130 (225)
T 1upi_A 71 SVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREG---------------SPTF-----GRWDSVLLDDQDRRT 130 (225)
T ss_dssp EEECTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBT---------------CTTT-----TCEEEEEEETTTCCE
T ss_pred EeCCCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCC---------------CCCC-----CcEEEEEecCCCCcE
Confidence 4456788888998753 22223677788743333321110 1111 3456666665 589
Q ss_pred EEeCCCCeEEEEeCCCc
Q psy12281 310 IFVPSGWHHQVTNLEHT 326 (456)
Q Consensus 310 LfIPsgW~H~V~nl~~s 326 (456)
||||.|+||...++++.
T Consensus 131 L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 131 IYVSEGLAHGFLALQDN 147 (225)
T ss_dssp EEECTTCEEEEEECSSS
T ss_pred EEeCCCeeEEEEEcCCC
Confidence 99999999999999985
No 128
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=82.44 E-value=3.5 Score=37.55 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=29.7
Q ss_pred CceEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEee
Q psy12281 297 DTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHN 332 (456)
Q Consensus 297 ~~~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~ 332 (456)
.+...++|.++-.||||.|.||.-.++++...+.+.
T Consensus 106 g~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y~ 141 (197)
T 1nxm_A 106 GNTYQTVIDASKSIFVPRGVANGFQVLSDFVAYSYL 141 (197)
T ss_dssp TCEEEEEECTTEEEEECTTEEEEEEECSSEEEEEEE
T ss_pred CeEEEEEeCCCcEEEeCCCeEEEEEeccCCeEEEEE
Confidence 456778888999999999999999999996545543
No 129
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=82.25 E-value=1.1 Score=37.92 Aligned_cols=26 Identities=23% Similarity=0.409 Sum_probs=22.8
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCCc
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEHT 326 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~s 326 (456)
+.+++|||++|+|+|..|...|.++.
T Consensus 94 ~~~l~~GD~i~~p~g~~h~~~~~~~~ 119 (133)
T 2pyt_A 94 TMIAKAGDVMFIPKGSSIEFGTPTSV 119 (133)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEE
T ss_pred EEEECCCcEEEECCCCEEEEEeCCCE
Confidence 46899999999999999999986653
No 130
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=81.72 E-value=5.7 Score=36.65 Aligned_cols=73 Identities=7% Similarity=0.038 Sum_probs=45.0
Q ss_pred eeCCCCCccccccccc--CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC--CCE
Q psy12281 234 YMGPKETWTPLHADVF--HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA--GDS 309 (456)
Q Consensus 234 ~iG~~gs~T~lH~D~~--~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p--GD~ 309 (456)
-.+.+|..-.+|+... ..--+..++.|+=.-+++.-... +|.+ .+...++|.+ +..
T Consensus 60 S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~---------------SpTf-----G~~~~v~Ls~~n~~~ 119 (216)
T 2c0z_A 60 SVSVRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVG---------------SPTY-----GCWEGTRLDDVSRRA 119 (216)
T ss_dssp EEEETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBT---------------CTTT-----TCEEEEEEETTTCCE
T ss_pred EeCCCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCC---------------CCCC-----CeEEEEEecCCCCCE
Confidence 3445788788888753 11222667788733333221110 1111 3456666665 589
Q ss_pred EEeCCCCeEEEEeCCCc
Q psy12281 310 IFVPSGWHHQVTNLEHT 326 (456)
Q Consensus 310 LfIPsgW~H~V~nl~~s 326 (456)
||||.|+||...++++.
T Consensus 120 L~IP~G~aHgF~~Lsd~ 136 (216)
T 2c0z_A 120 VYLSEGIGHGFCAISDE 136 (216)
T ss_dssp EEECTTEEEEEEECSSE
T ss_pred EEeCCCeeEEEEEcCCC
Confidence 99999999999999985
No 131
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=81.38 E-value=11 Score=34.44 Aligned_cols=72 Identities=15% Similarity=0.176 Sum_probs=44.6
Q ss_pred eCCCCCccccccccc--CccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC--CCEE
Q psy12281 235 MGPKETWTPLHADVF--HSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA--GDSI 310 (456)
Q Consensus 235 iG~~gs~T~lH~D~~--~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p--GD~L 310 (456)
.+.+|..-.+|+... ..--+..++.|+=.-+++.-.. .+|.+ .+...++|.+ +..|
T Consensus 53 ~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~---------------~SpTf-----G~~~~v~Ls~~n~~~L 112 (205)
T 1oi6_A 53 MSKRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRV---------------GSPTF-----GQWDSVLMDQQDPRAV 112 (205)
T ss_dssp EECTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCB---------------TCTTT-----TCEEEEEECSSSCCEE
T ss_pred eCCCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCC---------------CCCCC-----CeEEEEEecCCCCCEE
Confidence 456788788888742 1222256667763333322111 01111 3566777766 5899
Q ss_pred EeCCCCeEEEEeCCCc
Q psy12281 311 FVPSGWHHQVTNLEHT 326 (456)
Q Consensus 311 fIPsgW~H~V~nl~~s 326 (456)
|||.|+||...++++.
T Consensus 113 ~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 113 YLPVGVGHAFVALEDD 128 (205)
T ss_dssp EECTTCEEEEEECSTT
T ss_pred EeCCCeeEEEEEccCC
Confidence 9999999999999985
No 132
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=81.34 E-value=1.8 Score=38.64 Aligned_cols=62 Identities=24% Similarity=0.226 Sum_probs=43.7
Q ss_pred ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEE
Q psy12281 231 RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSI 310 (456)
Q Consensus 231 ~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~L 310 (456)
+.+-+.| |+.+++|.....-+ ..++.|+=.+.+= ..-+.+|+|||++
T Consensus 82 ~~v~l~P-G~~~~~H~H~~eE~--~~VLeGel~l~ld------------------------------~ge~~~L~~GDsi 128 (172)
T 3es1_A 82 RVVDMLP-GKESPMHRTNSIDY--GIVLEGEIELELD------------------------------DGAKRTVRQGGII 128 (172)
T ss_dssp EEEEECT-TCBCCCBCCSEEEE--EEEEESCEEEECG------------------------------GGCEEEECTTCEE
T ss_pred EEEEECC-CCCCCCeecCceEE--EEEEeCEEEEEEC------------------------------CCeEEEECCCCEE
Confidence 3344555 44588888765555 5778877555440 0115789999999
Q ss_pred EeCCCCeEEEEeCCCc
Q psy12281 311 FVPSGWHHQVTNLEHT 326 (456)
Q Consensus 311 fIPsgW~H~V~nl~~s 326 (456)
+|++-.|+..|.++.
T Consensus 129 -~~~g~~H~~~N~g~~ 143 (172)
T 3es1_A 129 -VQRGTNHLWRNTTDK 143 (172)
T ss_dssp -EECSCCBEEECCSSS
T ss_pred -EeCCCcEEEEeCCCC
Confidence 999999999999874
No 133
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=81.25 E-value=3.3 Score=42.72 Aligned_cols=91 Identities=15% Similarity=0.021 Sum_probs=54.1
Q ss_pred ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCC----C-CccccCC------------------
Q psy12281 231 RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSM----G-NLISDMR------------------ 287 (456)
Q Consensus 231 ~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~----g-~~p~d~~------------------ 287 (456)
..+-+.|.|- .++|+-....+ ..++.|+=..-++.|+...-..... + .-|+...
T Consensus 46 ~r~~i~p~Gl-~lPh~~~a~e~--~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (466)
T 3kgl_A 46 VRYIIESKGL-YLPSFFSTAKL--SFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQGQG 122 (466)
T ss_dssp EEEEECTTEE-EEEEEESSCEE--EEEEECEEEEEEECTTCCCCEEECCSSCCCC-------------------------
T ss_pred EEEEECCCCE-eCCeeCCCCeE--EEEEeCeEEEEEecCCCcchhhcccccccccccccccccccccccccccccccccc
Confidence 3467777665 66666655555 7899999999999997655321100 0 0000000
Q ss_pred ------Cc----ccCCCCC-CceEEEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 288 ------SV----DWSTLPR-DTVIIVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 288 ------~p----d~~~fp~-~~~~~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
.. .-+++.. ... .-.+++||+++||+|.-|..+|.++
T Consensus 123 ~~~~~~~~~~~~~~~~~~d~hqk-v~~l~~GDvi~iPaG~~~~~~N~g~ 170 (466)
T 3kgl_A 123 QQGQQGQQGQQSQGQGFRDMHQK-VEHIRTGDTIATHPGVAQWFYNDGN 170 (466)
T ss_dssp ----------------CCEEESC-EEEEETTEEEEECTTCEEEEECCSS
T ss_pred cccccccccccccccccccccee-eccccCCCEEEECCCCcEEEEeCCC
Confidence 00 0001111 111 2378999999999999999999987
No 134
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=80.69 E-value=3.8 Score=38.88 Aligned_cols=25 Identities=20% Similarity=0.197 Sum_probs=23.1
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+..++|||+++||++=.|...|.++
T Consensus 222 ~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 222 WYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp EEEEETTCEEEECTTCCEEEEEECS
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 5789999999999999999999866
No 135
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=80.33 E-value=3.2 Score=43.36 Aligned_cols=93 Identities=17% Similarity=0.126 Sum_probs=53.4
Q ss_pred ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCC--CCc------cccCCCcccC-CCCCCceEE
Q psy12281 231 RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSM--GNL------ISDMRSVDWS-TLPRDTVII 301 (456)
Q Consensus 231 ~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~--g~~------p~d~~~pd~~-~fp~~~~~~ 301 (456)
..+-|.|.|- ...|+-... -|..++.|+=...+.-|+......... ++- .-.....+-. ++....-..
T Consensus 51 ~r~~i~p~gl-~lPh~~~a~--~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~qkv 127 (510)
T 3c3v_A 51 SRLVLRRNAL-RRPFYSNAP--QEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSHQKV 127 (510)
T ss_dssp EEEEECTTEE-EEEEECSSC--EEEEEEECCEEEEEECTTCCCCEEEECCC--------------------CEEEEESCC
T ss_pred EEEEECCCCC-ccceecCCC--eEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccccccccccccceE
Confidence 4466777665 677775433 468999999999999887532111000 000 0000000000 000001123
Q ss_pred EEEcCCCEEEeCCCCeEEEEeCCCc
Q psy12281 302 VEQEAGDSIFVPSGWHHQVTNLEHT 326 (456)
Q Consensus 302 ~~l~pGD~LfIPsgW~H~V~nl~~s 326 (456)
..+++||+++||+|-.|...|.+++
T Consensus 128 ~~v~~GDvi~iPaG~~hw~~N~g~~ 152 (510)
T 3c3v_A 128 HRFNEGDLIAVPTGVAFWLYNDHDT 152 (510)
T ss_dssp EEECTTEEEEECTTCEEEEEECSSS
T ss_pred EEecCCCEEEECCCCCEEEEeCCCC
Confidence 5899999999999999999999873
No 136
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=79.55 E-value=4.2 Score=42.24 Aligned_cols=85 Identities=12% Similarity=0.018 Sum_probs=50.4
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCC-CceEEEEEcCCCEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPR-DTVIIVEQEAGDSI 310 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~-~~~~~~~l~pGD~L 310 (456)
.+-|.|.|- .+.|+-...-+ ..++.|+=..-++-|+... .|... ..-....-.++.. ...+ -.+++||++
T Consensus 50 R~~i~pggl-~lPh~~~A~ei--~~V~qG~g~~G~v~p~~~e-~f~~~----~~~~~~~~~~~~d~~qk~-~~l~~GDV~ 120 (496)
T 3ksc_A 50 RATLQRNAL-RRPYYSNAPQE--IFIQQGNGYFGMVFPGCPE-TFEEP----QESEQGEGRRYRDRHQKV-NRFREGDII 120 (496)
T ss_dssp EEEECTTEE-EEEEEESSCEE--EEEEECCEEEEEECTTCCC-C-------------------CCCCCCE-EEECTTEEE
T ss_pred EEEecCCCE-eCceEcCCCEE--EEEEeCceEEEEEeCCCCc-cchhh----hhcccccccccccchhee-eccCCCCEE
Confidence 356666554 66666644444 7899999999999887432 12000 0000000001111 1122 289999999
Q ss_pred EeCCCCeEEEEeCCC
Q psy12281 311 FVPSGWHHQVTNLEH 325 (456)
Q Consensus 311 fIPsgW~H~V~nl~~ 325 (456)
.||+|-.|...|.++
T Consensus 121 viPaG~~h~~~N~G~ 135 (496)
T 3ksc_A 121 AVPTGIVFWMYNDQD 135 (496)
T ss_dssp EECTTCEEEEEECSS
T ss_pred EECCCCcEEEEcCCC
Confidence 999999999999987
No 137
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=79.44 E-value=7.3 Score=35.70 Aligned_cols=39 Identities=28% Similarity=0.321 Sum_probs=29.4
Q ss_pred ceEEEEEcCCCEEEeCCCCeEEEEeCC---CcEEEEeecCCC
Q psy12281 298 TVIIVEQEAGDSIFVPSGWHHQVTNLE---HTISINHNWING 336 (456)
Q Consensus 298 ~~~~~~l~pGD~LfIPsgW~H~V~nl~---~sIsvn~~~~~~ 336 (456)
....+.-++|++|+.||.-+|.|.... +-|||++|....
T Consensus 167 ~~~~i~P~~G~lvlFpS~l~H~V~p~~~~~~RiSIsFN~~~~ 208 (216)
T 2rg4_A 167 TFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWG 208 (216)
T ss_dssp SEEEECCCTTEEEEEETTSCEEECCCCSSSCEEEEEEEEEC-
T ss_pred CeeEecCCCCeEEEECCCCEEeccCCCCCCCEEEEEEEeecC
Confidence 345788899999999999999998733 466666665543
No 138
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=79.44 E-value=2.4 Score=42.87 Aligned_cols=64 Identities=14% Similarity=0.047 Sum_probs=49.5
Q ss_pred ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCE-
Q psy12281 231 RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDS- 309 (456)
Q Consensus 231 ~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~- 309 (456)
..+-+.|.|. .+.|+- ....|..++.|+=+..++.|+.. .+..+++||+
T Consensus 55 ~~~~l~pgg~-~~ph~~--~a~ei~yVl~G~~~v~~v~~~~~---------------------------~~~~l~~GDv~ 104 (397)
T 2phl_A 55 VEFRSKPETL-LLPQQA--DAELLLVVRSGSAILVLVKPDDR---------------------------REYFFLTSDNP 104 (397)
T ss_dssp EEEEECSSEE-EEEEEE--SEEEEEEEEESEEEEEEEETTTE---------------------------EEEEEEESSCT
T ss_pred EEEEECCCcC-ccCEec--CCCeEEEEEeeeEEEEEEeCCCc---------------------------EEEEECCCCcc
Confidence 3456677555 566653 34467999999999999876421 2568999999
Q ss_pred -----EEeCCCCeEEEEeCC
Q psy12281 310 -----IFVPSGWHHQVTNLE 324 (456)
Q Consensus 310 -----LfIPsgW~H~V~nl~ 324 (456)
++||+|-.|...|.+
T Consensus 105 ~~~~~~~iP~G~~h~~~N~g 124 (397)
T 2phl_A 105 IFSDHQKIPAGTIFYLVNPD 124 (397)
T ss_dssp TSCSEEEECTTCEEEEEECC
T ss_pred cccceEEECCCCcEEEEeCC
Confidence 999999999999988
No 139
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=78.94 E-value=17 Score=33.01 Aligned_cols=80 Identities=14% Similarity=0.130 Sum_probs=49.1
Q ss_pred eeeCCCCCcccccccc--cCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcC--CC
Q psy12281 233 VYMGPKETWTPLHADV--FHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEA--GD 308 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~--~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~p--GD 308 (456)
.-.+.+|+.-.+|+.. ...--+..++.|+=.-+++.-.. .+| .| .+...++|.+ +-
T Consensus 48 ~S~S~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~---------------~Sp---Tf--G~w~~v~Ls~en~~ 107 (201)
T 4hn1_A 48 VAVSHRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRI---------------GSP---TF--GRWEIVPMDAERNT 107 (201)
T ss_dssp EEEECTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCB---------------TCT---TT--TCEEEEEEETTTCC
T ss_pred EEEcCCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCC---------------CCC---CC--CeEEEEEecCCCCC
Confidence 3445678888899864 12222356677764333322111 011 11 3455666654 89
Q ss_pred EEEeCCCCeEEEEeCCCcEEEEee
Q psy12281 309 SIFVPSGWHHQVTNLEHTISINHN 332 (456)
Q Consensus 309 ~LfIPsgW~H~V~nl~~sIsvn~~ 332 (456)
.||||.|.+|...+|++.-.+.+.
T Consensus 108 ~l~IP~GfaHGF~~Lsd~a~~~Y~ 131 (201)
T 4hn1_A 108 AVYLTAGLGRAFLSLTDDATLVFL 131 (201)
T ss_dssp EEEECTTCEEEEEECSTTEEEEEE
T ss_pred EEEeCCcceEEEeecCCCeEEEEe
Confidence 999999999999999996555554
No 140
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=77.86 E-value=3.3 Score=38.87 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=21.8
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+..++|||++|+|++-.|...|.++
T Consensus 219 ~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 219 WIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EEEEETTCEEEECSSEEEEEEEC--
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 5789999999999999999999865
No 141
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=75.14 E-value=1.5 Score=39.40 Aligned_cols=28 Identities=29% Similarity=0.139 Sum_probs=24.4
Q ss_pred ceEEEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 298 TVIIVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 298 ~~~~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+.+.+.++|||+|+||+|=+|...+.++
T Consensus 120 ~~~~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 120 EVFQVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp CEEEEECCCSCEEEECTTCCBCCCCSSC
T ss_pred EEEEEEECCCCEEEECCCCeEeeecCCC
Confidence 4567889999999999999999887666
No 142
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=71.43 E-value=20 Score=32.76 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=49.6
Q ss_pred CCCcccccccc----cCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeC
Q psy12281 238 KETWTPLHADV----FHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVP 313 (456)
Q Consensus 238 ~gs~T~lH~D~----~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIP 313 (456)
.|+.-.+|.|. ++...-++.+-+...|.|-+... ......+.|++||+|.++
T Consensus 114 ~G~~i~~H~D~~e~~~~~pI~svSLG~~~~f~f~~~~~------------------------~~~~~~i~L~~GsllvM~ 169 (211)
T 3i3q_A 114 PGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKR------------------------NDPLKRLLLEHGDVVVWG 169 (211)
T ss_dssp TTCCEEEECCCCCSCTTSCEEEEEEESCEEEEECCSST------------------------TSCCEEEEECTTCEEEEC
T ss_pred CCCCcccccCCCccccCCCEEEEECCCCeEEEEecccC------------------------CCceEEEECCCCCEEEEC
Confidence 34579999994 23222244455555555533211 124578999999999998
Q ss_pred ---CCCeEEEEeCCC---------cEEEEeecCCC
Q psy12281 314 ---SGWHHQVTNLEH---------TISINHNWING 336 (456)
Q Consensus 314 ---sgW~H~V~nl~~---------sIsvn~~~~~~ 336 (456)
..|+|.|..... -||+++.....
T Consensus 170 G~~r~~~H~I~~~~~~~~p~~~~~RIsLTFR~~~~ 204 (211)
T 3i3q_A 170 GESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGK 204 (211)
T ss_dssp GGGTTCCEEECCCCCCCBTTTBTCEEEEEEECCSC
T ss_pred chHHceEeccCcccCCcCCCCCCCEEEEEeeeccC
Confidence 459999988864 68888876654
No 143
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=67.96 E-value=0.85 Score=31.48 Aligned_cols=32 Identities=25% Similarity=0.506 Sum_probs=20.9
Q ss_pred EEec-CCCCcEEeehhhhhcCCcEEeCCCCcceEEE
Q psy12281 23 YYPC-PCGDRFQITKEQLKAGEDVATCPTCSLIIKP 57 (456)
Q Consensus 23 ~~~C-rCg~~f~i~~~~l~~~~~~~~C~~CSl~i~~ 57 (456)
.|.| |||..|.-++-+.. .-+.|+.|-..|-.
T Consensus 3 iY~C~rCg~~fs~~el~~l---P~IrCpyCGyrii~ 35 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQLKVL---PGVRCPYCGYKIIF 35 (48)
T ss_dssp --CCCCTTTTCCCCCSCCC---SSSCCTTTCCSCEE
T ss_pred EEEeeccCCCccHHHHhhC---CCcccCccCcEEEE
Confidence 5889 99998876443322 34799999876643
No 144
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=67.25 E-value=13 Score=34.39 Aligned_cols=26 Identities=19% Similarity=0.133 Sum_probs=23.8
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
-...++|||++|++++=.|+.+|.++
T Consensus 204 ~~~~l~~GD~~~~~~~~pH~~~n~g~ 229 (246)
T 1sfn_A 204 NYYPVTAGDIIWMGAHCPQWYGALGR 229 (246)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEEcCCCCEEEECCCCCEEEEcCCC
Confidence 35689999999999999999999887
No 145
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=66.97 E-value=3.8 Score=39.14 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=23.4
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+.+++|||.+|+|++-.|...|.++
T Consensus 109 ~~~L~~GD~i~ip~~~~H~~~N~g~ 133 (278)
T 1sq4_A 109 VHAMQPGGYAFIPPGADYKVRNTTG 133 (278)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSS
T ss_pred EEEECCCCEEEECCCCcEEEEECCC
Confidence 5789999999999999999999976
No 146
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=66.87 E-value=4.5 Score=34.70 Aligned_cols=28 Identities=18% Similarity=0.169 Sum_probs=24.7
Q ss_pred eEEEEEcCCCEEEeCCCCeEEEEeCCCc
Q psy12281 299 VIIVEQEAGDSIFVPSGWHHQVTNLEHT 326 (456)
Q Consensus 299 ~~~~~l~pGD~LfIPsgW~H~V~nl~~s 326 (456)
.-.+.++||++..||.|=||......++
T Consensus 75 d~~V~l~~Ge~yvVPkGveH~p~a~~e~ 102 (140)
T 3d0j_A 75 IELTLMEKGKVYNVPAECWFYSITQKDT 102 (140)
T ss_dssp EEEEECCTTCCEEECTTCEEEEEECTTC
T ss_pred cceEEecCCCEEEeCCCccCcccCCCce
Confidence 3468999999999999999999987774
No 147
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=63.63 E-value=5.5 Score=37.34 Aligned_cols=25 Identities=16% Similarity=0.301 Sum_probs=23.4
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+.+|+|||.+|+|++-.|...|.++
T Consensus 100 ~~~L~~Gd~~~~~~~~~H~~~N~~~ 124 (261)
T 1rc6_A 100 TFALSEGGYLYCPPGSLMTFVNAQA 124 (261)
T ss_dssp EEEEETTEEEEECTTCCCEEEECSS
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 5789999999999999999999976
No 148
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=63.28 E-value=4.1 Score=35.68 Aligned_cols=22 Identities=14% Similarity=0.064 Sum_probs=20.2
Q ss_pred EEEEcCCCEEEeCCCCeEEEEe
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTN 322 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~n 322 (456)
...++|||+++||+|=.|++.+
T Consensus 87 ~~~l~~GD~v~IPpg~~H~i~g 108 (157)
T 4h7l_A 87 SYPLTKLLAISIPPLVRHRIVG 108 (157)
T ss_dssp EEECCTTEEEEECTTCCEEEES
T ss_pred EEEeCCCCEEEECCCCeEeeEC
Confidence 5789999999999999999985
No 149
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=62.22 E-value=17 Score=33.84 Aligned_cols=88 Identities=16% Similarity=0.054 Sum_probs=50.3
Q ss_pred eeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEe
Q psy12281 233 VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFV 312 (456)
Q Consensus 233 l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfI 312 (456)
+.+-..|..+|+|+...-.=-..+---|.=...||-.+....+......++.|-. ++.-...-+++|.|||-+=|
T Consensus 110 ~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~-----~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 110 IMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGC-----RQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp EEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTE-----EEEECTTCEEEECTTCEEEE
T ss_pred EeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCe-----EEEeCCCCEEEECCCCeEec
Confidence 4555566779999987643211222223445667755443322211111111110 00003455789999999999
Q ss_pred CCCCeEEEEeCCC
Q psy12281 313 PSGWHHQVTNLEH 325 (456)
Q Consensus 313 PsgW~H~V~nl~~ 325 (456)
|+|-||.-..-+.
T Consensus 185 ~Pg~~H~F~ae~g 197 (246)
T 3kmh_A 185 PPGLYHSFWAEAG 197 (246)
T ss_dssp CTTEEEEEEECTT
T ss_pred CCCCEEEEEecCC
Confidence 9999999998877
No 150
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=61.88 E-value=6.2 Score=37.32 Aligned_cols=25 Identities=20% Similarity=0.242 Sum_probs=23.4
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+.+|+|||.+|+|++-.|...|.++
T Consensus 103 ~~~L~~GD~~~~~~~~~H~~~N~~~ 127 (274)
T 1sef_A 103 THELEAGGYAYFTPEMKMYLANAQE 127 (274)
T ss_dssp EEEEETTEEEEECTTSCCEEEESSS
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 5789999999999999999999976
No 151
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=56.88 E-value=5.2 Score=33.19 Aligned_cols=25 Identities=16% Similarity=0.213 Sum_probs=20.5
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
.+++.|||++++|+||-..-+..+.
T Consensus 81 ~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 81 PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp CEEECTTEEEEECTTCCEEEEECSC
T ss_pred EEEECCCCEEEECCCCeEEEEEeEE
Confidence 4789999999999999776665554
No 152
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=56.72 E-value=5.7 Score=38.46 Aligned_cols=30 Identities=17% Similarity=0.282 Sum_probs=23.3
Q ss_pred eEEEEEcCCCEEEeCCCCeEEEEeCCCcEEE
Q psy12281 299 VIIVEQEAGDSIFVPSGWHHQVTNLEHTISI 329 (456)
Q Consensus 299 ~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsv 329 (456)
--.+.++|||.+|||+|-.|....-. .+=|
T Consensus 157 Ln~v~l~pGd~~~ipaGt~HA~~~G~-~~Ei 186 (300)
T 1zx5_A 157 LNTFETTPYDTFVIRPGIPHAGEGLR-VLEV 186 (300)
T ss_dssp EEEEECCTTCEEEECTTCCEEEESEE-EEEE
T ss_pred hceeECCCCCEEEcCCCCceEcCCCC-eeee
Confidence 34689999999999999999976533 4433
No 153
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=55.54 E-value=15 Score=34.82 Aligned_cols=25 Identities=16% Similarity=0.405 Sum_probs=22.7
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+.+|++||.+|+|++=-|+..|.++
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~~~ 134 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCVES 134 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEESSC
T ss_pred EEEEcCCCEEEECCCCCEEEEeCCC
Confidence 4789999999999999999999765
No 154
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=55.47 E-value=8.5 Score=28.77 Aligned_cols=32 Identities=22% Similarity=0.642 Sum_probs=23.5
Q ss_pred ceEEEecCCCCcEEeehhhhhcCCcEEeCCCCcceEEEe
Q psy12281 20 ETYYYPCPCGDRFQITKEQLKAGEDVATCPTCSLIIKPS 58 (456)
Q Consensus 20 ~~~~~~CrCg~~f~i~~~~l~~~~~~~~C~~CSl~i~~~ 58 (456)
+.....|.||..+ .++...|+|+.|..|.+..
T Consensus 13 ~~~~~~C~C~~~~-------~~g~~mI~Cd~C~~W~H~~ 44 (72)
T 1wee_A 13 DNWKVDCKCGTKD-------DDGERMLACDGCGVWHHTR 44 (72)
T ss_dssp CSSEECCTTCCCS-------CCSSCEEECSSSCEEEETT
T ss_pred CCcceEeeCCCcc-------CCCCcEEECCCCCCccCCe
Confidence 4467789999753 2345699999999887744
No 155
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=55.47 E-value=6.1 Score=38.58 Aligned_cols=23 Identities=30% Similarity=0.498 Sum_probs=20.3
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEe
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTN 322 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~n 322 (456)
-.+.++|||.+|||+|-.|....
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECS
T ss_pred eEEEcCCCCEEEcCCCCceEecC
Confidence 46899999999999999999654
No 156
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=53.82 E-value=41 Score=31.84 Aligned_cols=25 Identities=20% Similarity=0.162 Sum_probs=23.2
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
...+++||++|+|++-.|+..|.++
T Consensus 226 ~~~V~~GD~i~~~~~~~h~~~n~G~ 250 (266)
T 4e2q_A 226 WYPVQAGDVIWMAPFVPQWYAALGK 250 (266)
T ss_dssp EEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEecCCCEEEECCCCcEEEEeCCC
Confidence 5789999999999999999999876
No 157
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=53.42 E-value=12 Score=31.40 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=21.8
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLE 324 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~ 324 (456)
+..++|||+++||+|=.|...+.+
T Consensus 57 ~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 57 EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEEECTTCEEEECTTCCEEEEECT
T ss_pred EEEecCCeEEEEcCCCCEEEEeCC
Confidence 578999999999999999988865
No 158
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=52.56 E-value=9.8 Score=38.27 Aligned_cols=25 Identities=16% Similarity=0.263 Sum_probs=21.5
Q ss_pred eEEEEEcCCCEEEeCCCCeEEEEeC
Q psy12281 299 VIIVEQEAGDSIFVPSGWHHQVTNL 323 (456)
Q Consensus 299 ~~~~~l~pGD~LfIPsgW~H~V~nl 323 (456)
--.+.++|||.+|||+|-.|....-
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~~G 263 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYLQG 263 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcCCC
Confidence 3478999999999999999997653
No 159
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=51.68 E-value=10 Score=38.75 Aligned_cols=24 Identities=17% Similarity=0.173 Sum_probs=21.3
Q ss_pred EEEEEcCCCEEEeCCCCeEEEEeC
Q psy12281 300 IIVEQEAGDSIFVPSGWHHQVTNL 323 (456)
Q Consensus 300 ~~~~l~pGD~LfIPsgW~H~V~nl 323 (456)
-.+.|+|||.+|||+|=.|....-
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~G 289 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYISG 289 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEE
T ss_pred ceEecCCCCEEecCCCCccccCCC
Confidence 368999999999999999998764
No 160
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=51.04 E-value=8.6 Score=40.16 Aligned_cols=40 Identities=8% Similarity=-0.100 Sum_probs=29.6
Q ss_pred ceeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCc
Q psy12281 231 RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEK 273 (456)
Q Consensus 231 ~~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~ 273 (456)
..+-+.|.|- .+.|+.+...+ ..++.|+=..=++-|+...
T Consensus 51 ~R~~i~p~Gl-~lPh~~~a~el--~yV~qG~g~~G~v~Pgcpe 90 (531)
T 3fz3_A 51 SRITIQRNGL-HLPSYSNAPQL--IYIVQGRGVLGAVFSGCPE 90 (531)
T ss_dssp EEEEECTTEE-EEEEEESSCEE--EEEEECEEEEEECCTTCCC
T ss_pred EEEEecCCCE-eCCccCCCCeE--EEEEECcEEEEEEcCCCcc
Confidence 3466777665 78888776556 7889999888888787654
No 161
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=50.85 E-value=15 Score=34.23 Aligned_cols=24 Identities=25% Similarity=0.383 Sum_probs=18.6
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLE 324 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~ 324 (456)
.++++|||+++||+||-=.-+..+
T Consensus 206 ~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 206 SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp EEEECTTCEEEECTTCEEEEEESS
T ss_pred EEEECCCCEEEECCCCEEEEEECc
Confidence 588999999999999964444433
No 162
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=48.22 E-value=11 Score=35.09 Aligned_cols=25 Identities=20% Similarity=0.318 Sum_probs=22.7
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+.+|+|||.+|+|++=-|...|.++
T Consensus 87 ~~~l~~Gd~~~~p~~~~H~~~n~~~ 111 (246)
T 1sfn_A 87 TRTLREYDYVYLPAGEKHMLTAKTD 111 (246)
T ss_dssp EEEECTTEEEEECTTCCCEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 5789999999999999999999844
No 163
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=47.95 E-value=43 Score=31.96 Aligned_cols=34 Identities=12% Similarity=0.116 Sum_probs=29.5
Q ss_pred eEEEEEcCCCEEEeCCCCeEEEEeCCCcEEEEee
Q psy12281 299 VIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHN 332 (456)
Q Consensus 299 ~~~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~ 332 (456)
..+..|.+||.|.||++--|+..-.++|+++...
T Consensus 243 ~q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I~ 276 (286)
T 2qnk_A 243 GRRLSLAPDDSLLVLAGTSYAWERTQGSVALSVT 276 (286)
T ss_dssp TEEEEECTTEEEEECTTCCEEEEECTTCEEEEEE
T ss_pred CeEEeccCCCEEEecCCCeEEEEecCCeEEEEEE
Confidence 3468899999999999999999999997777654
No 164
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=46.90 E-value=10 Score=36.09 Aligned_cols=27 Identities=22% Similarity=0.094 Sum_probs=24.5
Q ss_pred eEEEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 299 VIIVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 299 ~~~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
.-...++|||+||+|++=-|+..|.++
T Consensus 229 ~~~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 229 QDWVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp TEEEEEETTCEEEEEESCCEEEECCSS
T ss_pred CEEEEeCCCCEEEECCCCCEEEEcCCC
Confidence 346899999999999999999999887
No 165
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=46.13 E-value=15 Score=29.15 Aligned_cols=28 Identities=18% Similarity=0.277 Sum_probs=24.4
Q ss_pred ceEEEEEcCCCEEEeCCCCeEEEEeCCC
Q psy12281 298 TVIIVEQEAGDSIFVPSGWHHQVTNLEH 325 (456)
Q Consensus 298 ~~~~~~l~pGD~LfIPsgW~H~V~nl~~ 325 (456)
+.++..|++||++.||.|..=...+-.+
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~~~ 31 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAASD 31 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESSS
T ss_pred chhhceecCCcEEEECCCCceeEEecCC
Confidence 4578899999999999999988888764
No 166
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=42.13 E-value=65 Score=28.93 Aligned_cols=76 Identities=13% Similarity=0.143 Sum_probs=49.1
Q ss_pred cccccccccC-----ccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEEeCCC
Q psy12281 241 WTPLHADVFH-----SYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSG 315 (456)
Q Consensus 241 ~T~lH~D~~~-----~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~LfIPsg 315 (456)
+-.+|.|... ...-++.+-+...|.|-+..... .|. -.......+.|++||+|.++..
T Consensus 113 ~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~~-----~~~------------~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 113 HICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRG-----KSP------------SRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp CEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGCS-----SSC------------SCCCCCEEEEECTTEEEEEETT
T ss_pred cccceecChhhccCCCcEEEEECCCceEEEEEEcCCCc-----ccc------------ccCCceEEEECCCCCEEEECch
Confidence 6899999843 23224555566666665432111 000 0024568999999999999865
Q ss_pred ----CeEEEEeCC----CcEEEEeec
Q psy12281 316 ----WHHQVTNLE----HTISINHNW 333 (456)
Q Consensus 316 ----W~H~V~nl~----~sIsvn~~~ 333 (456)
|.|.|.... .-||+++..
T Consensus 176 ~q~~w~H~Ip~~~~~~~~RislTFR~ 201 (204)
T 3s57_A 176 TNTHWYHSLPVRKKVLAPRVNLTFRK 201 (204)
T ss_dssp HHHHEEEEECCCTTCCSCEEEEEEEC
T ss_pred hhheeEeeccccCCCCCCEEEEEeee
Confidence 889998875 478888754
No 167
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=39.85 E-value=50 Score=29.42 Aligned_cols=29 Identities=17% Similarity=0.071 Sum_probs=24.0
Q ss_pred EEEcCCCEEEeCCCCeEEEEe--CCCcEEEE
Q psy12281 302 VEQEAGDSIFVPSGWHHQVTN--LEHTISIN 330 (456)
Q Consensus 302 ~~l~pGD~LfIPsgW~H~V~n--l~~sIsvn 330 (456)
.+..+||.+++|+|=-|+..+ .++++-+.
T Consensus 161 ~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~ 191 (195)
T 2q1z_B 161 DRFGAGDIEIADQELEHTPVAERGLDCICLA 191 (195)
T ss_dssp SEEETTCEEEECSSCCCCCEECSSSCEEEEE
T ss_pred EEECCCeEEEeCcCCccCCEeCCCCCEEEEE
Confidence 367899999999999999999 56666544
No 168
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=37.01 E-value=18 Score=30.75 Aligned_cols=67 Identities=9% Similarity=-0.180 Sum_probs=45.1
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+.+- +|+..|.|....... ..+|.|+-+.. .|.. .-..+++|||.++
T Consensus 48 ~~~~~-pG~~~p~H~H~~~ee--~~VL~G~~~~~-------------~g~~----------------~~~~~~~~Gd~~~ 95 (145)
T 2o1q_A 48 IFDCP-AGSSFAAHVHVGPGE--YFLTKGKMDVR-------------GGKA----------------AGGDTAIAPGYGY 95 (145)
T ss_dssp EEEEC-TTEEECCEEESSCEE--EEEEEEEEEET-------------TCGG----------------GTSEEEESSEEEE
T ss_pred EEEEC-CCCCCCccCCCCCEE--EEEEEeEEEEc-------------CCCE----------------ecceEeCCCEEEE
Confidence 34444 466688888876666 77888875420 0110 0036889999999
Q ss_pred eCCCCeEE-EEeCCCcEEEE
Q psy12281 312 VPSGWHHQ-VTNLEHTISIN 330 (456)
Q Consensus 312 IPsgW~H~-V~nl~~sIsvn 330 (456)
+|+|=-|+ +.+.++++-+-
T Consensus 96 ~p~g~~H~p~~~~e~~~~l~ 115 (145)
T 2o1q_A 96 ESANARHDKTEFPVASEFYM 115 (145)
T ss_dssp ECTTCEESCCEEEEEEEEEE
T ss_pred ECcCCccCCeECCCCeEEEE
Confidence 99999999 76677765544
No 169
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=35.61 E-value=8.6 Score=28.90 Aligned_cols=29 Identities=28% Similarity=0.781 Sum_probs=20.3
Q ss_pred eEEEec-CCCCcEEeehhhhhcCCcEEeCCCCcceE
Q psy12281 21 TYYYPC-PCGDRFQITKEQLKAGEDVATCPTCSLII 55 (456)
Q Consensus 21 ~~~~~C-rCg~~f~i~~~~l~~~~~~~~C~~CSl~i 55 (456)
.+.|.| .||-.|.+... +.+.|+.|.-.|
T Consensus 26 ~v~Y~C~~CG~~~e~~~~------d~irCp~CG~RI 55 (70)
T 1twf_L 26 TLKYICAECSSKLSLSRT------DAVRCKDCGHRI 55 (70)
T ss_dssp CCCEECSSSCCEECCCTT------STTCCSSSCCCC
T ss_pred eEEEECCCCCCcceeCCC------CCccCCCCCceE
Confidence 477889 79988887521 345888887644
No 170
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=34.61 E-value=27 Score=30.83 Aligned_cols=20 Identities=25% Similarity=0.346 Sum_probs=17.9
Q ss_pred EcCCCE--EEeCCCCeEEEEeC
Q psy12281 304 QEAGDS--IFVPSGWHHQVTNL 323 (456)
Q Consensus 304 l~pGD~--LfIPsgW~H~V~nl 323 (456)
+..||. ++||+|+|+..+++
T Consensus 101 v~~Ge~pQ~vVP~G~wqaa~~~ 122 (170)
T 1yud_A 101 LAAGERPQFLVPKGCIFGSAMN 122 (170)
T ss_dssp TTTTEESCEEECTTCEEEEEES
T ss_pred cccCceeEEEECCCCEEEEEEC
Confidence 456888 99999999999998
No 171
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=34.58 E-value=44 Score=31.12 Aligned_cols=38 Identities=21% Similarity=0.121 Sum_probs=31.8
Q ss_pred eEEEEEcCCCEEEeCCCCeEEEEeCC--CcEEEEeecCCC
Q psy12281 299 VIIVEQEAGDSIFVPSGWHHQVTNLE--HTISINHNWING 336 (456)
Q Consensus 299 ~~~~~l~pGD~LfIPsgW~H~V~nl~--~sIsvn~~~~~~ 336 (456)
...+..++|++|+.|++..|.|.... .-.+++.|+.+.
T Consensus 157 ~~~V~P~~G~~v~F~s~~lH~v~pV~~G~R~~~~~Wi~s~ 196 (243)
T 3dkq_A 157 QQSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMWLQSM 196 (243)
T ss_dssp EEEECCCTTCEEEEETTSEEEECCEEEECEEEEEEEEEES
T ss_pred cEEEecCCCEEEEECCCCeEcCccccccCEEEEEEehhhc
Confidence 45678889999999999999998864 478888887755
No 172
>2avu_E Flagellar transcriptional activator FLHC; C4-type zinc finger, transcription activator; 3.00A {Escherichia coli} SCOP: e.64.1.1
Probab=34.56 E-value=15 Score=33.19 Aligned_cols=29 Identities=24% Similarity=0.538 Sum_probs=19.8
Q ss_pred eEEEec-CCCCcEEeehhhhhcCCcEEeCCCCc
Q psy12281 21 TYYYPC-PCGDRFQITKEQLKAGEDVATCPTCS 52 (456)
Q Consensus 21 ~~~~~C-rCg~~f~i~~~~l~~~~~~~~C~~CS 52 (456)
.=.-+| +||+.|+..-.++..+ ..|+-|.
T Consensus 132 L~l~~C~~Cgg~fv~~~~~~~~~---f~Cp~C~ 161 (192)
T 2avu_E 132 LQLSSCNCCGGNFITHAHQPVGS---FACSLCQ 161 (192)
T ss_dssp EEEEECTTTCCEEEEESSCCSSC---CCCTTC-
T ss_pred eeeCcCCCCCCCeeCccCCCCCC---CcCCCCC
Confidence 345678 7999999887774443 5788887
No 173
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=32.46 E-value=32 Score=29.77 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=23.5
Q ss_pred EEcCCCEEEeCCCCeEEEEeC----CCcEEEE
Q psy12281 303 EQEAGDSIFVPSGWHHQVTNL----EHTISIN 330 (456)
Q Consensus 303 ~l~pGD~LfIPsgW~H~V~nl----~~sIsvn 330 (456)
++.|||.++.|+|=.|++.+. ++++-+.
T Consensus 81 ~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~ 112 (159)
T 3ebr_A 81 VAHAGSVVYETASTRHTPQSAYAEGPDIITFN 112 (159)
T ss_dssp CBCTTCEEEECSSEEECEEESSSSSSCEEEEE
T ss_pred EECCCeEEEECCCCcceeEeCCCCCCCEEEEE
Confidence 578999999999999999998 4565554
No 174
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=31.38 E-value=10 Score=27.88 Aligned_cols=29 Identities=31% Similarity=0.741 Sum_probs=22.1
Q ss_pred EEEec-CCCCcEEeehhhhhcCCcEEeCCCCcceEE
Q psy12281 22 YYYPC-PCGDRFQITKEQLKAGEDVATCPTCSLIIK 56 (456)
Q Consensus 22 ~~~~C-rCg~~f~i~~~~l~~~~~~~~C~~CSl~i~ 56 (456)
-.|-| +||..+.+.. ...+.|+.|.-.|-
T Consensus 20 v~Y~C~~Cg~~~~l~~------~~~iRC~~CG~RIL 49 (63)
T 3h0g_L 20 MIYLCADCGARNTIQA------KEVIRCRECGHRVM 49 (63)
T ss_dssp CCCBCSSSCCBCCCCS------SSCCCCSSSCCCCC
T ss_pred eEEECCCCCCeeecCC------CCceECCCCCcEEE
Confidence 67889 8998887652 24689999987664
No 175
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=27.70 E-value=63 Score=29.67 Aligned_cols=23 Identities=9% Similarity=0.033 Sum_probs=20.8
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNL 323 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl 323 (456)
+..+.|||+++||+|=.|.....
T Consensus 50 ~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 50 SYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEECTTEEEEECTTCEEEEEEE
T ss_pred eEEEcCCCEEEEcCCCceeeccc
Confidence 46799999999999999998876
No 176
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=27.47 E-value=20 Score=33.51 Aligned_cols=32 Identities=25% Similarity=0.603 Sum_probs=21.5
Q ss_pred ecCCCC-cEEeehhhhh---cCCcEEeCCCCcceEE
Q psy12281 25 PCPCGD-RFQITKEQLK---AGEDVATCPTCSLIIK 56 (456)
Q Consensus 25 ~CrCg~-~f~i~~~~l~---~~~~~~~C~~CSl~i~ 56 (456)
.-+||| .+.|+...+. .++.++.|++|.=.+-
T Consensus 198 ~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL~ 233 (256)
T 3na7_A 198 KQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILY 233 (256)
T ss_dssp TTBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEEE
T ss_pred CCccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeEE
Confidence 347888 5556665543 3667999999985443
No 177
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=27.42 E-value=39 Score=24.88 Aligned_cols=28 Identities=32% Similarity=0.642 Sum_probs=20.6
Q ss_pred EEecCCCCcEEeehhhhhcCCcEEeCCCCcceEEEe
Q psy12281 23 YYPCPCGDRFQITKEQLKAGEDVATCPTCSLIIKPS 58 (456)
Q Consensus 23 ~~~CrCg~~f~i~~~~l~~~~~~~~C~~CSl~i~~~ 58 (456)
...|-||..+ ++...|+|+.|.-|.+..
T Consensus 19 ~~~CiC~~~~--------~~~~MIqCd~C~~WfH~~ 46 (68)
T 3o70_A 19 LVTCFCMKPF--------AGRPMIECNECHTWIHLS 46 (68)
T ss_dssp CCCSTTCCCC--------TTCCEEECTTTCCEEETT
T ss_pred ceEeECCCcC--------CCCCEEECCCCCcccccc
Confidence 3459999643 245799999999888743
No 178
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=25.88 E-value=56 Score=30.35 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=27.0
Q ss_pred EEEEcCCCEEEeCCCCeEEEEeCCCcEEEEeecC
Q psy12281 301 IVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWI 334 (456)
Q Consensus 301 ~~~l~pGD~LfIPsgW~H~V~nl~~sIsvn~~~~ 334 (456)
.+++.|||+++||.|.-|.-...+..-.+=..|-
T Consensus 84 ~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~~~ 117 (238)
T 3myx_A 84 SVTLSTGESAVIGRGTQVRIDAQPESLWAFCAST 117 (238)
T ss_dssp EEEEETTCEEEECTTCCEEEEECTTEEEEEEEEC
T ss_pred EEEEcCCCEEEECCCCEEEEEecCCeEEEEEecc
Confidence 5789999999999999999999888444433344
No 179
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=25.71 E-value=47 Score=28.92 Aligned_cols=64 Identities=23% Similarity=0.165 Sum_probs=44.4
Q ss_pred eeeeCCCCCcccccccccCccceeEEEEeEEEEEEeCCCCCcccccCCCCccccCCCcccCCCCCCceEEEEEcCCCEEE
Q psy12281 232 FVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIF 311 (456)
Q Consensus 232 ~l~iG~~gs~T~lH~D~~~~~sW~~~i~G~Krw~L~pP~~~~~Ly~~~g~~p~d~~~pd~~~fp~~~~~~~~l~pGD~Lf 311 (456)
.+.+.+ |+..|.|..+.... ..+|.|+=+. ... + ..++.+||.++
T Consensus 47 lvr~~p-G~~~p~H~H~g~ee--~~VL~G~f~~-----~~~-------~--------------------~~~~~aGd~~~ 91 (165)
T 3cjx_A 47 RASFAP-GLTLPLHFHTGTVH--MYTISGCWYY-----TEY-------P--------------------GQKQTAGCYLY 91 (165)
T ss_dssp EEEECT-TCBCCEEEESSCEE--EEEEESEEEE-----TTC-------T--------------------TSCEETTEEEE
T ss_pred EEEECC-CCcCCcccCCCCEE--EEEEEEEEEE-----CCC-------c--------------------eEEECCCeEEE
Confidence 445554 56688999887766 7788887332 000 0 02468999999
Q ss_pred eCCCCeEEEEeCC----CcEEEE
Q psy12281 312 VPSGWHHQVTNLE----HTISIN 330 (456)
Q Consensus 312 IPsgW~H~V~nl~----~sIsvn 330 (456)
+|+|=-|++.+.+ ++|.+.
T Consensus 92 ~P~g~~H~~~a~~~~~~gci~l~ 114 (165)
T 3cjx_A 92 EPGGSIHQFNTPRDNEGQTEVIF 114 (165)
T ss_dssp ECTTCEECEECCTTCSSCEEEEE
T ss_pred eCCCCceeeEeCCCCCCCcEEEE
Confidence 9999999999987 554444
No 180
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=23.69 E-value=28 Score=25.59 Aligned_cols=13 Identities=31% Similarity=0.738 Sum_probs=10.4
Q ss_pred EEecCCCCcEEee
Q psy12281 23 YYPCPCGDRFQIT 35 (456)
Q Consensus 23 ~~~CrCg~~f~i~ 35 (456)
.+.||||+.|-..
T Consensus 29 ~f~CrCg~~FC~~ 41 (64)
T 1wfh_A 29 GFMCRCGTTFCGS 41 (64)
T ss_dssp CEECSSSCEECTT
T ss_pred CEEeecCCEeccc
Confidence 5889999988653
No 181
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=23.67 E-value=28 Score=25.64 Aligned_cols=13 Identities=31% Similarity=0.805 Sum_probs=10.4
Q ss_pred EEecCCCCcEEee
Q psy12281 23 YYPCPCGDRFQIT 35 (456)
Q Consensus 23 ~~~CrCg~~f~i~ 35 (456)
.+.||||+.|-..
T Consensus 29 ~f~CrCg~~FC~~ 41 (64)
T 1wg2_A 29 GFKCKCGSTFCGS 41 (64)
T ss_dssp CEECTTSCEECSS
T ss_pred CeEeecCCEeccc
Confidence 5889999988653
No 182
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=22.97 E-value=30 Score=30.85 Aligned_cols=36 Identities=14% Similarity=0.374 Sum_probs=25.9
Q ss_pred ecC-CCCcEEeehhhhhcCCcEEeCCCCcceEEEeeeehhh
Q psy12281 25 PCP-CGDRFQITKEQLKAGEDVATCPTCSLIIKPSVIKSVM 64 (456)
Q Consensus 25 ~Cr-Cg~~f~i~~~~l~~~~~~~~C~~CSl~i~~~~~~~~~ 64 (456)
.|+ |+..|.-.+. +...++|+.|.-|++........
T Consensus 4 ~CpiC~k~Y~~~~~----~~~MIqCd~C~~W~H~~Cvgi~~ 40 (183)
T 3lqh_A 4 FCPLCDKCYDDDDY----ESKMMQCGKCDRWVHSKCENLSD 40 (183)
T ss_dssp BCTTTCCBCTTCCT----TCCEEECTTTCCEEEGGGSSCCH
T ss_pred cCCCCcCccCCccc----CCCeEECCCCCcccchhccccCH
Confidence 386 9877654322 24699999999999987766543
No 183
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=22.61 E-value=60 Score=22.30 Aligned_cols=26 Identities=35% Similarity=0.705 Sum_probs=19.4
Q ss_pred ecCCCCcEEeehhhhhcCCcEEeCCCCcceEEEe
Q psy12281 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIKPS 58 (456)
Q Consensus 25 ~CrCg~~f~i~~~~l~~~~~~~~C~~CSl~i~~~ 58 (456)
.|-||..+ ++...++|+.|..|.+..
T Consensus 6 ~C~C~~~~--------~~~~MI~Cd~C~~W~H~~ 31 (52)
T 3o7a_A 6 TCFCMKPF--------AGRPMIECNECHTWIHLS 31 (52)
T ss_dssp CSTTCCBC--------TTCCEEECTTTCCEEETT
T ss_pred EEEeCCcC--------CCCCEEEcCCCCcccccc
Confidence 58898632 245799999999888753
No 184
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=22.02 E-value=31 Score=26.85 Aligned_cols=13 Identities=31% Similarity=1.004 Sum_probs=10.4
Q ss_pred EEecCCCCcEEee
Q psy12281 23 YYPCPCGDRFQIT 35 (456)
Q Consensus 23 ~~~CrCg~~f~i~ 35 (456)
.+.||||+.|-..
T Consensus 40 ~f~CrCg~~FC~~ 52 (85)
T 1wff_A 40 SFECRCGNNFCAS 52 (85)
T ss_dssp CEECTTCCEECTT
T ss_pred CeEcCCCCEeccc
Confidence 6889999988653
No 185
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=21.16 E-value=53 Score=24.72 Aligned_cols=32 Identities=16% Similarity=0.355 Sum_probs=22.9
Q ss_pred EEecCCCCcEEeehhhhhcCCcEEeCCCCcceEEEeeee
Q psy12281 23 YYPCPCGDRFQITKEQLKAGEDVATCPTCSLIIKPSVIK 61 (456)
Q Consensus 23 ~~~CrCg~~f~i~~~~l~~~~~~~~C~~CSl~i~~~~~~ 61 (456)
.-.|-||..+. .+...|+|+.|.-|.+..--.
T Consensus 12 ~~~C~C~~~~d-------~~~~MIqCd~C~~WfH~~Cvg 43 (79)
T 1wep_A 12 PVYCLCRQPYN-------VNHFMIECGLCQDWFHGSCVG 43 (79)
T ss_dssp CCCSTTSCSCC-------SSSCEEEBTTTCCEEEHHHHT
T ss_pred ccEEEcCCccC-------CCCceEEcCCCCCcEEeeecC
Confidence 34589997651 235689999999998765543
No 186
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=20.34 E-value=35 Score=25.82 Aligned_cols=12 Identities=33% Similarity=0.822 Sum_probs=9.9
Q ss_pred EEecCCCCcEEe
Q psy12281 23 YYPCPCGDRFQI 34 (456)
Q Consensus 23 ~~~CrCg~~f~i 34 (456)
.+.||||+.|-.
T Consensus 39 ~f~CrCg~~FCs 50 (74)
T 1wfp_A 39 GFKCRCGSTFCG 50 (74)
T ss_dssp CEECTTSCEECT
T ss_pred ceEeccCCEecc
Confidence 588999998865
No 187
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=20.18 E-value=36 Score=25.79 Aligned_cols=13 Identities=31% Similarity=0.700 Sum_probs=10.1
Q ss_pred EEEecCCCCcEEe
Q psy12281 22 YYYPCPCGDRFQI 34 (456)
Q Consensus 22 ~~~~CrCg~~f~i 34 (456)
.-+.||||+.|-.
T Consensus 38 ~gf~CrCg~~FCs 50 (74)
T 1wfl_A 38 TGFDCRCGNLFCG 50 (74)
T ss_dssp GCEECTTSCEECS
T ss_pred cCeecCCCCEech
Confidence 3588999988865
No 188
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=20.10 E-value=28 Score=28.48 Aligned_cols=26 Identities=19% Similarity=0.411 Sum_probs=17.6
Q ss_pred EEEecC-CCCcEEeehhhhhcCCcEE-eCCCCcce
Q psy12281 22 YYYPCP-CGDRFQITKEQLKAGEDVA-TCPTCSLI 54 (456)
Q Consensus 22 ~~~~Cr-Cg~~f~i~~~~l~~~~~~~-~C~~CSl~ 54 (456)
-.|.|+ ||..|.+.+ ... .||.|--.
T Consensus 72 ~~~~C~~CG~~~e~~~-------~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPNA-------LDYGVCEKCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSCC-------STTCCCSSSSSC
T ss_pred ceEEcCCCCCEEeCCC-------CCCCcCccccCC
Confidence 578894 998888731 235 78888443
Done!