Your job contains 1 sequence.
>psy12281
MSVYHDEIEIEDFEYDEDDETYYYPCPCGDRFQITKEQLKAGEDVATCPTCSLIIKPSVI
KSVMLMLSDSCNSNEQINVTTTALPQVDYNIDPSHIYPYCFNNFLSKNKPFILKSCVNEW
NSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKEYTIYWQNKIDGK
LSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGPKET
WTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDTVI
IVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHVYHEMVSHLEAVKKEIDDC
KDMDDWTSHCQLMLQVSFGINFRQFFDMLKFICQKRLTSLKNGTTIRLYGNWILSLDHTM
FDLRKASDVLKLCAQHEDWDLKLETNKLIEDLNSSI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12281
(456 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:2144404 - symbol:Jmjd4 "jumonji domain containing... 778 2.7e-77 1
ZFIN|ZDB-GENE-060929-636 - symbol:jmjd4 "jumonji domain c... 748 4.0e-74 1
FB|FBgn0032671 - symbol:CG7200 species:7227 "Drosophila m... 678 1.1e-66 1
WB|WBGene00011563 - symbol:jmjd-4 species:6239 "Caenorhab... 522 3.6e-50 1
TAIR|locus:2161967 - symbol:AT5G63080 "AT5G63080" species... 512 4.1e-49 1
POMBASE|SPAC25H1.02 - symbol:jmj1 "histone demethylase Jm... 365 1.5e-33 1
DICTYBASE|DDB_G0270006 - symbol:jcdI "transcription facto... 248 1.1e-17 2
TAIR|locus:2032090 - symbol:AT1G78280 species:3702 "Arabi... 235 2.0e-16 1
FB|FBgn0038948 - symbol:PSR "phosphatidylserine receptor"... 218 2.7e-15 1
UNIPROTKB|Q6NYC1 - symbol:JMJD6 "Bifunctional arginine de... 208 3.7e-14 1
UNIPROTKB|Q5R6G2 - symbol:JMJD6 "Bifunctional arginine de... 208 3.7e-14 1
MGI|MGI:1858910 - symbol:Jmjd6 "jumonji domain containing... 206 6.2e-14 1
RGD|1305395 - symbol:Jmjd6 "jumonji domain containing 6" ... 206 6.2e-14 1
UNIPROTKB|E2RE42 - symbol:JMJD6 "Uncharacterized protein"... 206 6.8e-14 1
UNIPROTKB|Q58DS6 - symbol:JMJD6 "Bifunctional arginine de... 205 8.2e-14 1
UNIPROTKB|I3L739 - symbol:JMJD6 "Uncharacterized protein"... 202 2.0e-13 1
UNIPROTKB|Q6Q4H1 - symbol:PSR "Bifunctional arginine deme... 201 2.0e-13 1
UNIPROTKB|F1NGN4 - symbol:JMJD6 "Bifunctional arginine de... 198 5.6e-13 1
UNIPROTKB|Q5ZMK5 - symbol:JMJD6 "Bifunctional arginine de... 198 5.6e-13 1
ZFIN|ZDB-GENE-040426-17 - symbol:jmjd6 "jumonji domain co... 195 1.1e-12 1
UNIPROTKB|Q623U2 - symbol:psr-1 "Bifunctional arginine de... 193 1.8e-12 1
TAIR|locus:2144153 - symbol:AT5G06550 "AT5G06550" species... 192 4.2e-12 1
UNIPROTKB|Q6GND3 - symbol:jmjd6-a "Bifunctional arginine ... 187 9.1e-12 1
UNIPROTKB|Q7ZX37 - symbol:jmjd6-b "Bifunctional arginine ... 185 1.5e-11 1
WB|WBGene00004205 - symbol:psr-1 species:6239 "Caenorhabd... 183 2.5e-11 1
UNIPROTKB|Q9GYI4 - symbol:psr-1 "Bifunctional arginine de... 183 2.5e-11 1
FB|FBgn0037883 - symbol:CG14701 species:7227 "Drosophila ... 149 8.4e-10 1
UNIPROTKB|Q96FX2 - symbol:DPH3 "DPH3 homolog" species:960... 149 8.4e-10 1
UNIPROTKB|Q6VUC1 - symbol:DPH3 "DPH3 homolog" species:100... 149 8.4e-10 1
RGD|1590566 - symbol:Dph3 "DPH3, KTI11 homolog (S. cerevi... 149 8.4e-10 1
MGI|MGI:1922658 - symbol:Dph3 "DPH3 homolog (KTI11, S. ce... 148 1.1e-09 1
ZFIN|ZDB-GENE-050522-545 - symbol:zgc:112231 "zgc:112231"... 148 1.1e-09 1
CGD|CAL0000230 - symbol:orf19.551 species:5476 "Candida a... 170 1.4e-09 1
UNIPROTKB|Q5A6K3 - symbol:CaO19.551 "Putative uncharacter... 170 1.4e-09 1
UNIPROTKB|Q1LZC9 - symbol:DPH3 "DPH3 homolog" species:991... 146 1.8e-09 1
UNIPROTKB|E2R4V8 - symbol:DPH3 "Uncharacterized protein" ... 146 1.8e-09 1
UNIPROTKB|E1BRJ8 - symbol:DPH3 "Uncharacterized protein" ... 144 2.9e-09 1
DICTYBASE|DDB_G0280485 - symbol:jcdH "transcription facto... 119 3.4e-09 2
UNIPROTKB|F1RS79 - symbol:DPH3 "Uncharacterized protein" ... 143 3.7e-09 1
WB|WBGene00010484 - symbol:dph-3 species:6239 "Caenorhabd... 137 1.7e-08 1
POMBASE|SPAC8F11.02c - symbol:dph3 "diphthamide biosynthe... 136 2.1e-08 1
UNIPROTKB|Q9H4G8 - symbol:DPH3P1 "Putative DPH3 homolog B... 135 2.8e-08 1
DICTYBASE|DDB_G0277061 - symbol:dph3 "diphthamide biosynt... 134 3.5e-08 1
TAIR|locus:2044606 - symbol:AT2G15910 "AT2G15910" species... 141 1.1e-06 1
UNIPROTKB|G4MKL9 - symbol:MGG_04401 "F-box and JmjC domai... 141 1.9e-06 1
SGD|S000007587 - symbol:KTI11 "Zn-ribbon protein required... 117 2.4e-06 1
GENEDB_PFALCIPARUM|PFL0860c - symbol:PFL0860c "hypothetic... 115 4.0e-06 1
UNIPROTKB|Q8I5N0 - symbol:PFL0860c "Conserved Plasmodium ... 115 4.0e-06 1
UNIPROTKB|G4MRH8 - symbol:MGG_02430 "Diphthamide biosynth... 111 1.1e-05 1
UNIPROTKB|Q08D35 - symbol:jhdm1d "Lysine-specific demethy... 134 2.1e-05 2
MGI|MGI:2443388 - symbol:Jhdm1d "jumonji C domain-contain... 133 3.4e-05 1
DICTYBASE|DDB_G0286391 - symbol:jcdC "transcription facto... 104 3.5e-05 2
DICTYBASE|DDB_G0290765 - symbol:jcdA "Kame" species:44689... 120 0.00010 1
UNIPROTKB|E1C7T6 - symbol:TYW5 "tRNA wybutosine-synthesiz... 116 0.00011 2
ASPGD|ASPL0000070501 - symbol:AN10542 species:162425 "Eme... 83 0.00025 2
UNIPROTKB|F1SRP4 - symbol:JHDM1D "Uncharacterized protein... 125 0.00026 1
DICTYBASE|DDB_G0270906 - symbol:jcdD "transcription facto... 119 0.00042 1
UNIPROTKB|Q6ZMT4 - symbol:JHDM1D "Lysine-specific demethy... 131 0.00049 2
TAIR|locus:2091861 - symbol:JMJD5 "AT3G20810" species:370... 118 0.00051 1
UNIPROTKB|F1P290 - symbol:JHDM1D "Uncharacterized protein... 121 0.00076 2
UNIPROTKB|F1N542 - symbol:JHDM1D "Uncharacterized protein... 125 0.00091 2
>MGI|MGI:2144404 [details] [associations]
symbol:Jmjd4 "jumonji domain containing 4" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003347
PROSITE:PS51184 SMART:SM00558 MGI:MGI:2144404 eggNOG:NOG291944
CTD:65094 GeneTree:ENSGT00530000063579 HOGENOM:HOG000039078
HOVERGEN:HBG097429 OMA:WVNGCNL OrthoDB:EOG47SSDS EMBL:AK037954
EMBL:AK052144 EMBL:AK079104 EMBL:AK145394 EMBL:AL592522
EMBL:AL713994 EMBL:BX255278 EMBL:BC049148 EMBL:BC116707
EMBL:BC118020 IPI:IPI00331560 IPI:IPI00648663 IPI:IPI00851063
RefSeq:NP_001191997.1 RefSeq:NP_848774.1 UniGene:Mm.295954
ProteinModelPortal:Q8BFT6 SMR:Q8BFT6 PhosphoSite:Q8BFT6
PRIDE:Q8BFT6 Ensembl:ENSMUST00000045279 Ensembl:ENSMUST00000108777
Ensembl:ENSMUST00000147163 GeneID:194952 KEGG:mmu:194952
UCSC:uc007jdu.1 UCSC:uc007jdw.1 InParanoid:Q8BFT6 NextBio:371676
Bgee:Q8BFT6 CleanEx:MM_JMJD4 Genevestigator:Q8BFT6 Uniprot:Q8BFT6
Length = 427
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 155/358 (43%), Positives = 219/358 (61%)
Query: 104 FLSKNKPFILKSCVNE-WNSSLHWVQNK-QPNFEYLSNHYGDIEVPVANCNSYYFNAHEK 161
FL N P + S E W S WV ++ +P+FEYL YGD VPVANC +N++ K
Sbjct: 50 FLLPNLPCVFSSAFTEGWGSRRRWVTSEGKPDFEYLQQKYGDAVVPVANCGVREYNSNPK 109
Query: 162 TNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKT---EDIYRVPNVFSSDWLNE 218
+M+ ++Y YW++ I G S + YLKDWH RD EDI+ +P FSSDWLNE
Sbjct: 110 EHMSFRDYISYWKDYIQGSYSSSRGCLYLKDWHLCRDSLVNDLEDIFTLPVYFSSDWLNE 169
Query: 219 YYSEHLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDS 278
++ + + DDYRFVY GP+ TW+P HAD+F S+SWSVNICG+K+WL PG E+ +D
Sbjct: 170 FWD--VLNVDDYRFVYAGPRGTWSPFHADIFRSFSWSVNICGKKKWLFFPPGEEEALRDC 227
Query: 279 MGNLISDMRS---VDWSTLPR----DTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINH 331
GNL D+ S +D P+ I V QE G+ +FVPSGWHHQV NL+ TISINH
Sbjct: 228 HGNLPYDVTSTELLDTHLYPKIQHHSLPIEVIQEPGEMVFVPSGWHHQVYNLDDTISINH 287
Query: 332 NWINGTNIDHVYHEMVSHLEAVKKEIDDCKD-MDDWTSHCQLMLQVSFGINFRQFFDMLK 390
NW+NG N+ +++H + L+AV+ E+++ KD M DW HCQ++++ GINF +F+ LK
Sbjct: 288 NWVNGCNLPNMWHFLQQELQAVQHEVEEWKDSMPDWHHHCQVIMKSCTGINFEEFYHFLK 347
Query: 391 FICQKRLTSLKNGTTIRLYGNWILSL--DHTMFDLRKASDVLKLCAQHEDWDLKLETN 446
I +KRL L+ G + L L FD+ + +DVL + D+ +++T+
Sbjct: 348 VIAEKRLLVLEQGLKGDSGDSRSLDLGLQQAAFDIGRLADVLASVVVNPDFQ-RVDTS 404
>ZFIN|ZDB-GENE-060929-636 [details] [associations]
symbol:jmjd4 "jumonji domain containing 4"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060929-636
eggNOG:NOG291944 EMBL:BC124503 IPI:IPI00804906
RefSeq:NP_001070096.1 UniGene:Dr.87188 ProteinModelPortal:Q08BY5
Ensembl:ENSDART00000105387 GeneID:767690 KEGG:dre:767690 CTD:65094
GeneTree:ENSGT00530000063579 HOGENOM:HOG000039078
HOVERGEN:HBG097429 InParanoid:Q08BY5 OMA:WVNGCNL OrthoDB:EOG47SSDS
NextBio:20918079 Bgee:Q08BY5 Uniprot:Q08BY5
Length = 422
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 155/370 (41%), Positives = 221/370 (59%)
Query: 87 VDYNIDPSHIYPYCFNNFLSKNKPFIL-KSCVNEWNSSLHWVQNK-QPNFEYLSNHYGDI 144
++Y I+ Y F N+L N+P + K EWN WV + +PN + L + + +
Sbjct: 29 IEY-IEREIPYSKFFKNYLIPNQPCMFSKKFTEEWNCRKKWVTAEGKPNLQRLLHEFDET 87
Query: 145 EVPVANCNSYYFNAHEKTNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDI 204
VPVANC+ +NA+ K M KE+ YW+ I S + YLKDWH R+F +I
Sbjct: 88 PVPVANCSVKEYNANPKQIMPFKEFIQYWRESIQNGHSSPKGCLYLKDWHMQRNFPEHNI 147
Query: 205 YRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQW 264
Y+ P FSSDWLNEY+ + +E DDYRFVYMGPK +WTP HADVF SYSWS NICGRK+W
Sbjct: 148 YKTPIYFSSDWLNEYW-DTIE-VDDYRFVYMGPKGSWTPFHADVFRSYSWSANICGRKKW 205
Query: 265 LLLAPGNEKYFKDSMGNLISDMRSV---DWSTLPR--DTVIIVE--QEAGDSIFVPSGWH 317
LL PG E + +D GNL D+ + D + + +E QEAG+ IFVPSGWH
Sbjct: 206 LLYPPGQEDFLRDCHGNLAYDVTAPILQDKGLYAQFEEACQPLEIIQEAGEIIFVPSGWH 265
Query: 318 HQVTNLEHTISINHNWINGTNIDHVYHEMVSHLEAVKKEIDDCKD-MDDWTSHCQLMLQV 376
HQV NLE TISINHNW+NG N+D ++ + L +V++EI++ +D MD W HCQ++++
Sbjct: 266 HQVYNLEDTISINHNWLNGCNLDIMWQFLQDELSSVQREIEEWRDTMDTWHQHCQVIMKS 325
Query: 377 SFGINFRQFFDMLKFICQKRLTSL----KNGTTIR-LYGNWILSLD--HTMFDLRKASDV 429
GI++ +F LK I R++ L +N + + L + +L H FDL++ +
Sbjct: 326 CTGIDYAEFASFLKTIANNRISFLNSSPRNADSCQDLLAESLCALGPHHAAFDLQRVLHI 385
Query: 430 LKLCAQHEDW 439
++ +ED+
Sbjct: 386 FEIMLNNEDF 395
>FB|FBgn0032671 [details] [associations]
symbol:CG7200 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE014134 eggNOG:NOG291944
GeneTree:ENSGT00530000063579 EMBL:AY051684 RefSeq:NP_609870.1
UniGene:Dm.7940 ProteinModelPortal:Q9VJ97 MINT:MINT-838068
PaxDb:Q9VJ97 PRIDE:Q9VJ97 EnsemblMetazoa:FBtr0081062 GeneID:35089
KEGG:dme:Dmel_CG7200 UCSC:CG7200-RA FlyBase:FBgn0032671
InParanoid:Q9VJ97 OMA:WSTNIVG OrthoDB:EOG41G1KX PhylomeDB:Q9VJ97
ChiTaRS:CG7200 GenomeRNAi:35089 NextBio:791806 Bgee:Q9VJ97
Uniprot:Q9VJ97
Length = 425
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 134/307 (43%), Positives = 180/307 (58%)
Query: 133 NFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKEYTIYWQNKIDGKLS---------- 182
NF+YL D VPVANCNS YFN+H K + +Y W++ I+ + S
Sbjct: 88 NFDYLKTKISDGPVPVANCNSSYFNSHTKLELNFHDYLAKWRSSIESQSSAAWTSAEVNS 147
Query: 183 ETEPL----YYLKDWHFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGPK 238
P YLKDWH + Y+VP F+SDWLNE + + KDDYRFVYMGPK
Sbjct: 148 NVAPASGDNLYLKDWHLAAQMPGYNFYKVPKYFASDWLNEQLIQ--QGKDDYRFVYMGPK 205
Query: 239 ETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTLPRDT 298
+WT HADVF S+SWS NI G K+WL++ PG E D +GNL S+D L
Sbjct: 206 NSWTSYHADVFGSFSWSTNIVGLKKWLIMPPGEELKLNDRLGNLPF---SIDEKMLDEHN 262
Query: 299 V--IIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHVYHEMVSHLEAVKKE 356
V + Q A +++FVPSGW HQV NL TIS+NHNW NG NI V+ + ++L+AV E
Sbjct: 263 VRYYTINQRANEAVFVPSGWFHQVWNLTDTISVNHNWFNGCNISMVWQNLKNNLKAVCNE 322
Query: 357 IDDCKDMDDWTSHCQLMLQVSFGINFRQFFDMLKFICQKRLTSLKNGTTIRLYGNWILSL 416
I DC+ MD++ +HCQ ML+ SFGIN+ F ++L+FI +RL T L+ ++ ++
Sbjct: 323 ISDCQQMDNFEAHCQTMLRASFGINYLDFIELLEFIAARRLAEGTVATKFLLFDSYTMND 382
Query: 417 DHTMFDL 423
H +DL
Sbjct: 383 YHVQYDL 389
Score = 136 (52.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 32/97 (32%), Positives = 46/97 (47%)
Query: 101 FNNFLSKNKPFILKSCVNEWNSSLHWVQ----------NKQP-----NFEYLSNHYGDIE 145
F ++ KN P I+ + N+W +W N P NF+YL D
Sbjct: 42 FWRYMHKNIPVIIANVSNDWECQ-NWTVGQSSPESRDLNSNPSASSINFDYLKTKISDGP 100
Query: 146 VPVANCNSYYFNAHEKTNMTLKEYTIYWQNKIDGKLS 182
VPVANCNS YFN+H K + +Y W++ I+ + S
Sbjct: 101 VPVANCNSSYFNSHTKLELNFHDYLAKWRSSIESQSS 137
>WB|WBGene00011563 [details] [associations]
symbol:jmjd-4 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0009792 EMBL:Z29443 eggNOG:NOG291944
GeneTree:ENSGT00530000063579 RefSeq:NP_001255071.1
ProteinModelPortal:Q14V35 SMR:Q14V35 EnsemblMetazoa:T07C4.11a
GeneID:259530 KEGG:cel:CELE_T07C4.11 UCSC:T07C4.11 CTD:259530
WormBase:T07C4.11a HOGENOM:HOG000015878 InParanoid:Q14V35
OMA:HNWMNST NextBio:952056 Uniprot:Q14V35
Length = 367
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 125/318 (39%), Positives = 175/318 (55%)
Query: 92 DPSHIYPYCFNNFLSKNKPFILKS-CVNEWNSSLHWV-QNKQPNFEYLSNHYGDIEVPVA 149
DPS + F KN+PFIL + W + WV N QPN EYL YGD +VP+
Sbjct: 10 DPSTPWLEILVKFGFKNEPFILGEWSTSGWTAVKDWVLPNGQPNKEYLKKSYGDSKVPIL 69
Query: 150 NCNSYYFNAHEKTNMTLKEYTIYWQNKIDGKLSET-EPLYYLKDWHFTRDFKTEDIYRVP 208
C N ++ T TLKE+ L E +P YLKDWHF +F T Y +
Sbjct: 70 -CGG---NQYKTT--TLKEF-----------LEEMGDPEVYLKDWHFQNEFGTSS-YSLH 111
Query: 209 NVFSSDWLN--EYYSEHLEHK--DDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQW 264
FS D++N + SE E+ DDYRFVY+G +WT LH+DV S+SWS NICGRKQW
Sbjct: 112 PFFSRDFVNCEPWTSEKSENPFGDDYRFVYIGASGSWTKLHSDVVSSHSWSANICGRKQW 171
Query: 265 LLLAPGNEKYFKDSM--GNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTN 322
++ PG+E F+ S+ + D+R + + VI QE G+ +FVPS W+HQ N
Sbjct: 172 FMMPPGSENLFRSSVTESGFVDDIREYE-RLFEQAKVIKFVQEPGEIVFVPSNWYHQAHN 230
Query: 323 LEHTISINHNWINGTNIDHVYHEMVSHLEA-VKKEIDDCKDM---DDWTSHCQLMLQVSF 378
LE TISINHNW+N TN+ H+ E +S E V++E+ DC D+ +++ L+L
Sbjct: 231 LEDTISINHNWMNSTNL-HLVQEFLSRRELDVREELQDCVDLFSAEEFEEKVDLVLFADA 289
Query: 379 GINFRQFFDMLKFICQKR 396
+N +F + + + + R
Sbjct: 290 RLNNSKFRKLCELVKESR 307
>TAIR|locus:2161967 [details] [associations]
symbol:AT5G63080 "AT5G63080" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR003347 PROSITE:PS51184 SMART:SM00558 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:NOG291944 OMA:WSTNIVG
EMBL:BT023460 EMBL:AK176202 IPI:IPI00525777 RefSeq:NP_201113.2
UniGene:At.8831 ProteinModelPortal:Q67ZB6 SMR:Q67ZB6 STRING:Q67ZB6
PRIDE:Q67ZB6 EnsemblPlants:AT5G63080.1 GeneID:836428
KEGG:ath:AT5G63080 TAIR:At5g63080 HOGENOM:HOG000082884
InParanoid:Q67ZB6 PhylomeDB:Q67ZB6 ProtClustDB:CLSN2681120
Genevestigator:Q67ZB6 Uniprot:Q67ZB6
Length = 462
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 102/299 (34%), Positives = 167/299 (55%)
Query: 104 FLSKNKPFILKSCVNEWNSSLHWV-QNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKT 162
+L+KN+P ++ +W + WV +N PN + H+G V VA+C++ F ++
Sbjct: 26 YLAKNQPVVISDLTEDWRAREDWVSENGNPNLHVFATHFGKSRVQVADCDTREFTDQKRL 85
Query: 163 NMTLKEYTIYWQNK--IDGKLSETEPLYYLKDWHFTRDFKTEDIYRVP--NVFSSDWLNE 218
M++ E+ W NK I+ + + +++K++ ++T ++ NV+ ++
Sbjct: 86 EMSVTEFVEQWTNKDSIEESVLYLKDWHFVKEYPDYTAYQTPPLFSDDWLNVYLDNYQMH 145
Query: 219 YYSEHLEHKD-----DYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGN-- 271
+ + D DYRFVYMG K +WTPLHADVF SYSWS N+CG+K+WL L P
Sbjct: 146 EDRDSFQKYDQISCSDYRFVYMGGKGSWTPLHADVFRSYSWSANVCGKKRWLFLPPPQSH 205
Query: 272 ---EKYFKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTIS 328
++Y K+ + ++ ++ + + T + QE G+ IFVPSGWHHQV NLE TIS
Sbjct: 206 LVYDRYMKNCVYDIFEEVNETKFPGFKKTTWLECIQEPGEIIFVPSGWHHQVYNLEDTIS 265
Query: 329 INHNWINGTNIDHVYHEMVSHLEAVKKEIDDCKDM-DDWTSHCQLMLQVSFGINFRQFF 386
INHNW+N N+ V+ + + ++ I+D +D+ DD+ + CQ L + G+N FF
Sbjct: 266 INHNWLNAYNLSWVWDLLWKDYKDTEESIEDIRDICDDFEAICQRNLAANTGMNLNDFF 324
>POMBASE|SPAC25H1.02 [details] [associations]
symbol:jmj1 "histone demethylase Jmj1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=ISM] [GO:0006338 "chromatin remodeling"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=ISM] [GO:0032452 "histone demethylase activity"
evidence=ISM] [GO:0033554 "cellular response to stress"
evidence=IEP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 PomBase:SPAC25H1.02 EMBL:CU329670 GO:GO:0006355
GenomeReviews:CU329670_GR GO:GO:0033554 GO:GO:0006338 GO:GO:0000790
PIR:T38382 RefSeq:NP_593806.1 ProteinModelPortal:O13977
EnsemblFungi:SPAC25H1.02.1 GeneID:2542086 KEGG:spo:SPAC25H1.02
eggNOG:NOG291944 OrthoDB:EOG4BK8D5 NextBio:20803159 GO:GO:0032452
Uniprot:O13977
Length = 464
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 91/289 (31%), Positives = 146/289 (50%)
Query: 132 PNFEYLSNHYGDIEVPVANCNSY-YFNAHEKTNMTLK-------EYTIYWQNKIDGKLSE 183
PN+EYL +YG I VP+A CN + + + + LK + + Q + ++
Sbjct: 119 PNYEYLEENYGTIPVPLAYCNEKDRYGSQRRETVPLKSALHELRDEQVQLQCR-QAPSNQ 177
Query: 184 TEPLYYLKDWHFTRDFKTEDI-YRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGPKETWT 242
Y KD H R D Y P++F+ DWLN Y + DD+RF Y+G T T
Sbjct: 178 ALKSLYAKDMHLFRHLDPADFPYSTPDIFADDWLNAYVIDC--ESDDFRFAYLGSHLTTT 235
Query: 243 PLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDSMGNLISDMRSVDWSTL------P- 295
LH DV+ S+S+SVN+CG K WL + P + + ++ +L D + W T P
Sbjct: 236 GLHTDVYASHSFSVNLCGVKCWLFIDPKDLQ----TIASLYDDQQLPSWITKDDLFRGPL 291
Query: 296 ---RDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHVYHEMVSHLEA 352
R + I+ Q G ++FVPSGW+HQV N+ T+SINHNW N + I +Y + E
Sbjct: 292 VNHRHLIKILFQYPGQTVFVPSGWYHQVLNIGTTLSINHNWCNASCILQMYTALKEQYEV 351
Query: 353 VKKEIDDCKD-----MDDWTSHCQLMLQVSFGINFRQFFDMLKFICQKR 396
+ + D + D ++ +++ ++G +R+F+ M+K ++R
Sbjct: 352 SAESLKDLLEDGIVTKDRFSQVVTEVVEANYGWCWRRFWGMIKHQLKRR 400
>DICTYBASE|DDB_G0270006 [details] [associations]
symbol:jcdI "transcription factor jumonji, jmjC
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003347 PROSITE:PS51184 SMART:SM00558
dictyBase:DDB_G0270006 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
eggNOG:NOG124833 RefSeq:XP_646466.1 EnsemblProtists:DDB0238369
GeneID:8617427 KEGG:ddi:DDB_G0270006 OMA:SWHIDPA Uniprot:Q55CL5
Length = 983
Score = 248 (92.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 80/272 (29%), Positives = 121/272 (44%)
Query: 128 QNKQPNFEYLSNHYGDIEVPVANCNSYYFN-AHE---KTNMTLKEYTIYWQNKIDGKLSE 183
Q P E N + + E + C F +H+ + MT ++Y Y + + D
Sbjct: 209 QRGTPMME--KNEWSE-ERLIERCGDVVFKISHQDNKRIQMTFRDYCQYMKTQTD----- 260
Query: 184 TEPLYYLKDWHFTRDFKTE-DIYRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGPKETWT 242
EPLY D F + D Y +P F D L +Y E EH+ +R++ +GP+ +
Sbjct: 261 EEPLYVF-DQAFGEKVPSLLDDYNIPKFFPED-LFKYNGE--EHRPHFRWIVIGPERSGA 316
Query: 243 PLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKDS---MGNLISDMRSVDWST-----L 294
H D + +W+ I GRK+WL+ P Y +S + + S+ W L
Sbjct: 317 SWHIDPAGTSAWNSLISGRKRWLMYPPNFTPYTVESDEVVDKIYGSPPSLLWLLEVYPYL 376
Query: 295 PRD-TVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHVYHEMVSHLEAV 353
P D I QE G++IFVP GW H V N+E +I++ N+ N N D V ++ +
Sbjct: 377 PPDYRPIECIQEPGETIFVPGGWWHMVLNMEQSIAVTQNFCNSQNFDEVCSDLAN----- 431
Query: 354 KKEIDDCKDMDDWTSHCQLMLQVSFGINFRQF 385
D KD DD+ H L + F F QF
Sbjct: 432 ----DQKKDYDDFKKHL-LTSRPDFQNKFNQF 458
Score = 43 (20.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 94 SHIYPYCFNNFLSKNKPFI 112
S++YP FN F KP+I
Sbjct: 131 SYLYPNSFNKF---KKPYI 146
>TAIR|locus:2032090 [details] [associations]
symbol:AT1G78280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0007166 "cell surface
receptor signaling pathway" evidence=ISS] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0052542 "defense
response by callose deposition" evidence=RCA] InterPro:IPR001810
InterPro:IPR003347 InterPro:IPR011009 Pfam:PF00646 PROSITE:PS50181
SMART:SM00558 Pfam:PF01636 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 EMBL:AC013430 SUPFAM:SSF56112 SUPFAM:SSF81383
GO:GO:0016772 InterPro:IPR002575 eggNOG:NOG124833 EMBL:BX817819
IPI:IPI00544281 PIR:A96812 RefSeq:NP_177951.6 UniGene:At.48390
UniGene:At.70998 ProteinModelPortal:Q9M9E8 SMR:Q9M9E8 PaxDb:Q9M9E8
PRIDE:Q9M9E8 EnsemblPlants:AT1G78280.1 GeneID:844163
KEGG:ath:AT1G78280 TAIR:At1g78280 InParanoid:Q9M9E8 OMA:PFRISQR
PhylomeDB:Q9M9E8 Genevestigator:Q9M9E8 Uniprot:Q9M9E8
Length = 943
Score = 235 (87.8 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 68/258 (26%), Positives = 113/258 (43%)
Query: 101 FNNFLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHE 160
F+ KP +L + W +S W + LS YG++ ++ +
Sbjct: 138 FSKEYDAKKPVLLSGLADSWPASNTWT------IDQLSEKYGEVPFRISQ------RSPN 185
Query: 161 KTNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSSDWLNEYY 220
K +M K+Y Y + + D +PLY D + Y VP++F DW E
Sbjct: 186 KISMKFKDYIAYMKTQRD-----EDPLYVFDDKFGEAAPELLKDYSVPHLFQEDWF-EIL 239
Query: 221 SEHLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEK-----YF 275
+ E + YR++ +GP+ + H D + +W+ +CGRK+W L PG +
Sbjct: 240 DK--ESRPPYRWLIVGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHV 297
Query: 276 KDSMGNLISDM-RSVDW--STLP----RDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTIS 328
+ G++ D S+ W P D I G++I+VPSGW H + NLE T++
Sbjct: 298 NEDDGDVSIDTPSSLQWWLDYYPLLADEDKPIECTLLPGETIYVPSGWWHCILNLEPTVA 357
Query: 329 INHNWINGTNIDHVYHEM 346
+ N++N N V +M
Sbjct: 358 VTQNFVNKENFGFVCLDM 375
>FB|FBgn0038948 [details] [associations]
symbol:PSR "phosphatidylserine receptor" species:7227
"Drosophila melanogaster" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0043066
"negative regulation of apoptotic process" evidence=IGI;IMP]
[GO:0046329 "negative regulation of JNK cascade" evidence=IGI]
[GO:0035212 "cell competition in a multicellular organism"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE014297 GO:GO:0005634 GO:GO:0043066
GO:GO:0006355 GO:GO:0046872 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 GO:GO:0046329 GO:GO:0035212 eggNOG:NOG124833
KO:K11323 GO:GO:0070815 GO:GO:0018395 GeneTree:ENSGT00530000063579
OMA:MHRRKKR EMBL:AY051727 RefSeq:NP_651026.1 UniGene:Dm.25482
ProteinModelPortal:Q9VD28 SMR:Q9VD28 MINT:MINT-328741 STRING:Q9VD28
PaxDb:Q9VD28 PRIDE:Q9VD28 EnsemblMetazoa:FBtr0084239 GeneID:42616
KEGG:dme:Dmel_CG5383 CTD:42616 FlyBase:FBgn0038948
InParanoid:Q9VD28 OrthoDB:EOG480GC4 PhylomeDB:Q9VD28
GenomeRNAi:42616 NextBio:829707 Bgee:Q9VD28 GermOnline:CG5383
Uniprot:Q9VD28
Length = 408
Score = 218 (81.8 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 76/256 (29%), Positives = 112/256 (43%)
Query: 109 KPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKE 168
KP +++ C + W + W + L+ Y + + N Y M +K
Sbjct: 73 KPVVIRGCTDGWLALEKWTLAR------LAKKYRNQKFKCGEDNEGY-----SVKMKMKY 121
Query: 169 YTIYWQNKIDGKLSETEPLYYLKDWHFT---RDFKTEDIYRVPNVFSSDWLNEYYSEHLE 225
Y Y Q+ D PLY D F R K D Y VP F D L +Y E+
Sbjct: 122 YVEYMQSTRDDS-----PLYIF-DSSFGEHHRRRKLLDDYVVPKYFRDD-LFQYCGEN-- 172
Query: 226 HKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYF---KDSMGNL 282
+ YR+ MGP + T +H D + +W+ I G K+W L K +MG
Sbjct: 173 RRPPYRWFVMGPARSGTGIHIDPLGTSAWNTLIRGHKRWCLFPTQTPKELLKVTSAMGGK 232
Query: 283 ISDMRSVDW-STL-PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISINH 331
D ++ W ST+ PR + I V Q AG+++FVP GW H V N++ TI+I
Sbjct: 233 QRD-EAITWFSTIYPRTQLPSWPEQYRPIEVLQGAGETVFVPGGWWHVVLNMDDTIAITQ 291
Query: 332 NWINGTNIDHVYHEMV 347
N+ + TN V+H+ V
Sbjct: 292 NFSSQTNFPCVWHKTV 307
>UNIPROTKB|Q6NYC1 [details] [associations]
symbol:JMJD6 "Bifunctional arginine demethylase and
lysyl-hydroxylase JMJD6" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0001822
"kidney development" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0042116 "macrophage activation" evidence=IEA]
[GO:0043654 "recognition of apoptotic cell" evidence=IEA]
[GO:0048821 "erythrocyte development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0033746
"histone demethylase activity (H3-R2 specific)" evidence=IDA]
[GO:0033749 "histone demethylase activity (H4-R3 specific)"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018395 "peptidyl-lysine
hydroxylation to 5-hydroxy-L-lysine" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0003727 "single-stranded RNA
binding" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0002040 "sprouting angiogenesis" evidence=ISS]
[GO:0070815 "peptidyl-lysine 5-dioxygenase activity" evidence=IDA]
[GO:0048024 "regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IDA]
[GO:0070078 "histone H3-R2 demethylation" evidence=IDA] [GO:0070079
"histone H4-R3 demethylation" evidence=IDA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005886
GO:GO:0006915 GO:GO:0005654 GO:GO:0007507 GO:GO:0005730
GO:GO:0006355 GO:GO:0008380 GO:GO:0005506 GO:GO:0030324
GO:GO:0003727 GO:GO:0006397 GO:GO:0004872 GO:GO:0006351
GO:GO:0042802 GO:GO:0016702 GO:GO:0060041 GO:GO:0001822
GO:GO:0007166 EMBL:CH471099 GO:GO:0033077 GO:GO:0042116
GO:GO:0002040 GO:GO:0048821 GO:GO:0048024 GO:GO:0043654
eggNOG:NOG124833 KO:K11323 GO:GO:0033746 GO:GO:0033749
GO:GO:0070815 GO:GO:0018395 CTD:23210 HOGENOM:HOG000265824
HOVERGEN:HBG054774 OMA:MHRRKKR OrthoDB:EOG4VMFFJ EMBL:AB073711
EMBL:AB011157 EMBL:AK021780 EMBL:AK294816 EMBL:AC005837
EMBL:BC047003 EMBL:BC066654 IPI:IPI00375496 IPI:IPI00550958
IPI:IPI00604598 RefSeq:NP_001074930.1 RefSeq:NP_055982.2
UniGene:Hs.514505 PDB:3K2O PDB:3LD8 PDB:3LDB PDBsum:3K2O
PDBsum:3LD8 PDBsum:3LDB ProteinModelPortal:Q6NYC1 SMR:Q6NYC1
STRING:Q6NYC1 PhosphoSite:Q6NYC1 DMDM:67461014 PaxDb:Q6NYC1
PRIDE:Q6NYC1 Ensembl:ENST00000397625 Ensembl:ENST00000445478
GeneID:23210 KEGG:hsa:23210 UCSC:uc002jsn.1 UCSC:uc002jso.3
GeneCards:GC17M074708 HGNC:HGNC:19355 HPA:CAB004548 MIM:604914
neXtProt:NX_Q6NYC1 PharmGKB:PA162392513 InParanoid:Q6NYC1
EvolutionaryTrace:Q6NYC1 GenomeRNAi:23210 NextBio:44753
ArrayExpress:Q6NYC1 Bgee:Q6NYC1 CleanEx:HS_JMJD6
Genevestigator:Q6NYC1 GermOnline:ENSG00000070495 Uniprot:Q6NYC1
Length = 403
Score = 208 (78.3 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 70/257 (27%), Positives = 110/257 (42%)
Query: 109 KPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKE 168
KP +L + W++ W E L Y + + N Y M +K
Sbjct: 68 KPVVLLNAQEGWSAQEKWT------LERLKRKYRNQKFKCGEDNDGY-----SVKMKMKY 116
Query: 169 YTIYWQNKIDGKLSETEPLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLE 225
Y Y ++ D PLY H R ED Y+VP F+ D L +Y E +
Sbjct: 117 YIEYMESTRDDS-----PLYIFDSSYGEHPKRRKLLED-YKVPKFFTDD-LFQYAGE--K 167
Query: 226 HKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE----KYFKDSMGN 281
+ YR+ MGP + T +H D + +W+ + G K+W L K +D GN
Sbjct: 168 RRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGN 227
Query: 282 LISDMRSVDWSTL--PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISIN 330
+ ++ W + PR + + + Q+ G+++FVP GW H V NL+ TI+I
Sbjct: 228 QQDE--AITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAIT 285
Query: 331 HNWINGTNIDHVYHEMV 347
N+ + TN V+H+ V
Sbjct: 286 QNFASSTNFPVVWHKTV 302
>UNIPROTKB|Q5R6G2 [details] [associations]
symbol:JMJD6 "Bifunctional arginine demethylase and
lysyl-hydroxylase JMJD6" species:9601 "Pongo abelii" [GO:0002040
"sprouting angiogenesis" evidence=ISS] [GO:0003727 "single-stranded
RNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0018395 "peptidyl-lysine hydroxylation to
5-hydroxy-L-lysine" evidence=ISS] [GO:0033746 "histone demethylase
activity (H3-R2 specific)" evidence=ISS] [GO:0033749 "histone
demethylase activity (H4-R3 specific)" evidence=ISS] [GO:0048024
"regulation of mRNA splicing, via spliceosome" evidence=ISS]
[GO:0070078 "histone H3-R2 demethylation" evidence=ISS] [GO:0070079
"histone H4-R3 demethylation" evidence=ISS] [GO:0070815
"peptidyl-lysine 5-dioxygenase activity" evidence=ISS]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005654 GO:GO:0030154 GO:GO:0005730 GO:GO:0006355
GO:GO:0008380 GO:GO:0046872 GO:GO:0003727 GO:GO:0006397
GO:GO:0006351 GO:GO:0016702 GO:GO:0002040 GO:GO:0048024 KO:K11323
GO:GO:0033746 GO:GO:0033749 GO:GO:0070815 GO:GO:0018395 CTD:23210
HOVERGEN:HBG054774 EMBL:CR860528 RefSeq:NP_001126553.1
UniGene:Pab.11465 ProteinModelPortal:Q5R6G2 SMR:Q5R6G2 PRIDE:Q5R6G2
GeneID:100173544 KEGG:pon:100173544 Uniprot:Q5R6G2
Length = 403
Score = 208 (78.3 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 70/257 (27%), Positives = 110/257 (42%)
Query: 109 KPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKE 168
KP +L + W++ W E L Y + + N Y M +K
Sbjct: 68 KPVVLLNAQEGWSAQEKWT------LERLKRKYRNQKFKCGEDNDGY-----SVKMKMKY 116
Query: 169 YTIYWQNKIDGKLSETEPLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLE 225
Y Y ++ D PLY H R ED Y+VP F+ D L +Y E +
Sbjct: 117 YIEYMESTRDDS-----PLYIFDSSYGEHPKRRKLLED-YKVPKFFTDD-LFQYAGE--K 167
Query: 226 HKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE----KYFKDSMGN 281
+ YR+ MGP + T +H D + +W+ + G K+W L K +D GN
Sbjct: 168 RRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGN 227
Query: 282 LISDMRSVDWSTL--PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISIN 330
+ ++ W + PR + + + Q+ G+++FVP GW H V NL+ TI+I
Sbjct: 228 QQDE--AITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAIT 285
Query: 331 HNWINGTNIDHVYHEMV 347
N+ + TN V+H+ V
Sbjct: 286 QNFASSTNFPVVWHKTV 302
>MGI|MGI:1858910 [details] [associations]
symbol:Jmjd6 "jumonji domain containing 6" species:10090
"Mus musculus" [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001822 "kidney development" evidence=IMP] [GO:0002040
"sprouting angiogenesis" evidence=IMP] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=ISO] [GO:0004872 "receptor activity" evidence=IDA]
[GO:0005506 "iron ion binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007507
"heart development" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0018395 "peptidyl-lysine hydroxylation to
5-hydroxy-L-lysine" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030324 "lung development"
evidence=IMP] [GO:0033077 "T cell differentiation in thymus"
evidence=IMP] [GO:0033746 "histone demethylase activity (H3-R2
specific)" evidence=ISO] [GO:0033749 "histone demethylase activity
(H4-R3 specific)" evidence=ISO] [GO:0042116 "macrophage activation"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0043277 "apoptotic cell clearance" evidence=IMP] [GO:0043654
"recognition of apoptotic cell" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0048024 "regulation of mRNA
splicing, via spliceosome" evidence=ISO;IMP] [GO:0048821
"erythrocyte development" evidence=IMP] [GO:0055114
"oxidation-reduction process" evidence=ISO] [GO:0060041 "retina
development in camera-type eye" evidence=IMP] [GO:0070078 "histone
H3-R2 demethylation" evidence=ISO] [GO:0070079 "histone H4-R3
demethylation" evidence=ISO] [GO:0070815 "peptidyl-lysine
5-dioxygenase activity" evidence=ISO] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 MGI:MGI:1858910
GO:GO:0005886 GO:GO:0006915 GO:GO:0005654 GO:GO:0007507
GO:GO:0005730 GO:GO:0006355 GO:GO:0008380 GO:GO:0005506
GO:GO:0030324 GO:GO:0003727 GO:GO:0006397 GO:GO:0004872
GO:GO:0006351 GO:GO:0016702 GO:GO:0060041 GO:GO:0001822
GO:GO:0007166 GO:GO:0033077 GO:GO:0042116 GO:GO:0002040
GO:GO:0048821 GO:GO:0048024 GO:GO:0043654 eggNOG:NOG124833
KO:K11323 GO:GO:0033746 GO:GO:0033749 GO:GO:0070815 GO:GO:0018395
GeneTree:ENSGT00530000063579 CTD:23210 HOGENOM:HOG000265824
HOVERGEN:HBG054774 OrthoDB:EOG4VMFFJ EMBL:AF304118 EMBL:AK122317
EMBL:AL645542 EMBL:BC056629 IPI:IPI00403333 IPI:IPI00880430
RefSeq:NP_203971.2 UniGene:Mm.481684 ProteinModelPortal:Q9ERI5
SMR:Q9ERI5 STRING:Q9ERI5 PhosphoSite:Q9ERI5 PRIDE:Q9ERI5
Ensembl:ENSMUST00000047616 GeneID:107817 KEGG:mmu:107817
UCSC:uc007mmi.1 UCSC:uc007mmj.1 InParanoid:Q9ERI5 ChiTaRS:JMJD6
NextBio:359521 Bgee:Q9ERI5 CleanEx:MM_JMJD6 Genevestigator:Q9ERI5
GermOnline:ENSMUSG00000056962 Uniprot:Q9ERI5
Length = 403
Score = 206 (77.6 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 71/258 (27%), Positives = 112/258 (43%)
Query: 109 KPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKE 168
KP +L + W++ W E L Y + + N Y M +K
Sbjct: 68 KPVVLLNAQEGWSAQEKWT------LERLKRKYRNQKFKCGEDNDGY-----SVKMKMKY 116
Query: 169 YTIYWQNKIDGKLSETEPLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLE 225
Y Y ++ D PLY H R ED Y+VP F+ D L +Y E +
Sbjct: 117 YIEYMESTRDDS-----PLYIFDSSYGEHPKRRKLLED-YKVPKFFTDD-LFQYAGE--K 167
Query: 226 HKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE-----KYFKDSMG 280
+ YR+ MGP + T +H D + +W+ + G K+W L P N K ++ G
Sbjct: 168 RRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLF-PTNTPRELIKVTREEGG 226
Query: 281 NLISDMRSVDWSTL--PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISI 329
N + ++ W + PR + + + Q+ G+++FVP GW H V NL+ TI+I
Sbjct: 227 NQQDE--AITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAI 284
Query: 330 NHNWINGTNIDHVYHEMV 347
N+ + TN V+H+ V
Sbjct: 285 TQNFASSTNFPVVWHKTV 302
>RGD|1305395 [details] [associations]
symbol:Jmjd6 "jumonji domain containing 6" species:10116 "Rattus
norvegicus" [GO:0001568 "blood vessel development" evidence=ISO]
[GO:0001822 "kidney development" evidence=IEA;ISO] [GO:0002040
"sprouting angiogenesis" evidence=ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0003727 "single-stranded RNA
binding" evidence=ISO;ISS] [GO:0004872 "receptor activity"
evidence=IEA;ISO] [GO:0005506 "iron ion binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005654 "nucleoplasm" evidence=ISO;ISS]
[GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA;ISO] [GO:0007166 "cell surface receptor signaling
pathway" evidence=IEA;ISO] [GO:0007507 "heart development"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0018395 "peptidyl-lysine hydroxylation to
5-hydroxy-L-lysine" evidence=ISO;ISS] [GO:0030324 "lung
development" evidence=IEA;ISO] [GO:0033077 "T cell differentiation
in thymus" evidence=IEA;ISO] [GO:0033746 "histone demethylase
activity (H3-R2 specific)" evidence=ISO;ISS] [GO:0033749 "histone
demethylase activity (H4-R3 specific)" evidence=ISO;ISS]
[GO:0042116 "macrophage activation" evidence=IEA;ISO] [GO:0042802
"identical protein binding" evidence=IEA;ISO] [GO:0043277
"apoptotic cell clearance" evidence=ISO] [GO:0043654 "recognition
of apoptotic cell" evidence=IEA;ISO] [GO:0048024 "regulation of
mRNA splicing, via spliceosome" evidence=ISO;ISS] [GO:0048821
"erythrocyte development" evidence=IEA;ISO] [GO:0060041 "retina
development in camera-type eye" evidence=IEA;ISO] [GO:0070078
"histone H3-R2 demethylation" evidence=ISO] [GO:0070079 "histone
H4-R3 demethylation" evidence=ISO] [GO:0070815 "peptidyl-lysine
5-dioxygenase activity" evidence=ISO;ISS] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 RGD:1305395
GO:GO:0005654 GO:GO:0030154 GO:GO:0005730 GO:GO:0006355
GO:GO:0008380 GO:GO:0046872 GO:GO:0003727 GO:GO:0006397
GO:GO:0006351 GO:GO:0016702 GO:GO:0002040 GO:GO:0048024 KO:K11323
GO:GO:0033746 GO:GO:0033749 GO:GO:0070815 GO:GO:0018395 CTD:23210
HOVERGEN:HBG054774 EMBL:AABR03075342 EMBL:AABR03077255
EMBL:BC079012 IPI:IPI00464733 RefSeq:NP_001012143.2
UniGene:Rn.19923 ProteinModelPortal:Q6AYK2 GeneID:360665
KEGG:rno:360665 NextBio:673684 Genevestigator:Q6AYK2 Uniprot:Q6AYK2
Length = 403
Score = 206 (77.6 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 71/258 (27%), Positives = 112/258 (43%)
Query: 109 KPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKE 168
KP +L + W++ W E L Y + + N Y M +K
Sbjct: 68 KPVVLLNAQEGWSAQEKWT------LERLKRKYRNQKFKCGEDNDGY-----SVKMKMKY 116
Query: 169 YTIYWQNKIDGKLSETEPLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLE 225
Y Y ++ D PLY H R ED Y+VP F+ D L +Y E +
Sbjct: 117 YIEYMESTRDDS-----PLYIFDSSYGEHPKRRKLLED-YKVPKFFTDD-LFQYAGE--K 167
Query: 226 HKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE-----KYFKDSMG 280
+ YR+ MGP + T +H D + +W+ + G K+W L P N K ++ G
Sbjct: 168 RRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLF-PTNTPRELIKVTREEGG 226
Query: 281 NLISDMRSVDWSTL--PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISI 329
N + ++ W + PR + + + Q+ G+++FVP GW H V NL+ TI+I
Sbjct: 227 NQQDE--AITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAI 284
Query: 330 NHNWINGTNIDHVYHEMV 347
N+ + TN V+H+ V
Sbjct: 285 TQNFASSTNFPVVWHKTV 302
>UNIPROTKB|E2RE42 [details] [associations]
symbol:JMJD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070815 "peptidyl-lysine 5-dioxygenase
activity" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0048821 "erythrocyte
development" evidence=IEA] [GO:0048024 "regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0043654 "recognition
of apoptotic cell" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0042116 "macrophage activation"
evidence=IEA] [GO:0033749 "histone demethylase activity (H4-R3
specific)" evidence=IEA] [GO:0033746 "histone demethylase activity
(H3-R2 specific)" evidence=IEA] [GO:0033077 "T cell differentiation
in thymus" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0018395 "peptidyl-lysine hydroxylation to
5-hydroxy-L-lysine" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0002040 "sprouting angiogenesis" evidence=IEA]
[GO:0001822 "kidney development" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005886
GO:GO:0006915 GO:GO:0005654 GO:GO:0007507 GO:GO:0005730
GO:GO:0005506 GO:GO:0030324 GO:GO:0003727 GO:GO:0004872
GO:GO:0060041 GO:GO:0001822 GO:GO:0007166 GO:GO:0033077
GO:GO:0042116 GO:GO:0002040 GO:GO:0048821 GO:GO:0048024
GO:GO:0043654 KO:K11323 GO:GO:0033746 GO:GO:0033749 GO:GO:0070815
GO:GO:0018395 GeneTree:ENSGT00530000063579 OMA:MHRRKKR
EMBL:AAEX03006277 RefSeq:XP_003639292.1 Ensembl:ENSCAFT00000008272
GeneID:100856152 KEGG:cfa:100856152 Uniprot:E2RE42
Length = 414
Score = 206 (77.6 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 69/257 (26%), Positives = 111/257 (43%)
Query: 109 KPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKE 168
KP +L + W++ W E L Y + + N Y M +K
Sbjct: 68 KPVVLLNAQEGWSAQEKWT------LERLKRKYRNQKFKCGEDNDGY-----SVKMKMKY 116
Query: 169 YTIYWQNKIDGKLSETEPLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLE 225
Y Y ++ D PLY H R ED Y+VP F+ D L +Y E +
Sbjct: 117 YIEYMESTRDDS-----PLYIFDSSYGEHPKRRKLLED-YKVPKFFTDD-LFQYAGE--K 167
Query: 226 HKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE----KYFKDSMGN 281
+ YR+ MGP + T +H D + +W+ + G K+W L K ++ GN
Sbjct: 168 RRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTREEGGN 227
Query: 282 LISDMRSVDWSTL--PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISIN 330
+ ++ W ++ PR + + + Q+ G+++FVP GW H V NL+ TI+I
Sbjct: 228 QQDE--AITWFSIIHPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAIT 285
Query: 331 HNWINGTNIDHVYHEMV 347
N+ + TN V+H+ V
Sbjct: 286 QNFASSTNFPVVWHKTV 302
>UNIPROTKB|Q58DS6 [details] [associations]
symbol:JMJD6 "Bifunctional arginine demethylase and
lysyl-hydroxylase JMJD6" species:9913 "Bos taurus" [GO:0002040
"sprouting angiogenesis" evidence=ISS] [GO:0003727 "single-stranded
RNA binding" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0048024 "regulation of
mRNA splicing, via spliceosome" evidence=ISS] [GO:0018395
"peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine" evidence=ISS]
[GO:0070815 "peptidyl-lysine 5-dioxygenase activity" evidence=ISS]
[GO:0033749 "histone demethylase activity (H4-R3 specific)"
evidence=ISS] [GO:0033746 "histone demethylase activity (H3-R2
specific)" evidence=ISS] [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0048821 "erythrocyte
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0042116 "macrophage activation" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005506 "iron ion binding" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0001822 "kidney development"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0005886 GO:GO:0006915 GO:GO:0005654
GO:GO:0007507 GO:GO:0005730 GO:GO:0006355 GO:GO:0008380
GO:GO:0005506 GO:GO:0030324 GO:GO:0003727 GO:GO:0006397
GO:GO:0004872 GO:GO:0006351 GO:GO:0016702 GO:GO:0060041
GO:GO:0001822 GO:GO:0007166 GO:GO:0033077 GO:GO:0042116
GO:GO:0002040 GO:GO:0048821 GO:GO:0048024 GO:GO:0043654
eggNOG:NOG124833 KO:K11323 GO:GO:0033746 GO:GO:0033749
GO:GO:0070815 GO:GO:0018395 GeneTree:ENSGT00530000063579
EMBL:BT021521 IPI:IPI00686389 RefSeq:NP_001029492.2
UniGene:Bt.32358 ProteinModelPortal:Q58DS6
Ensembl:ENSBTAT00000025492 GeneID:508343 KEGG:bta:508343 CTD:23210
HOGENOM:HOG000265824 HOVERGEN:HBG054774 InParanoid:Q58DS6
OMA:MHRRKKR OrthoDB:EOG4VMFFJ NextBio:20868470 Uniprot:Q58DS6
Length = 403
Score = 205 (77.2 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 69/257 (26%), Positives = 110/257 (42%)
Query: 109 KPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKE 168
KP +L + W++ W E L Y + + N Y M +K
Sbjct: 68 KPVVLLNAQEGWSAQEKWT------LERLKRKYRNQKFKCGEDNDGY-----SVKMKMKY 116
Query: 169 YTIYWQNKIDGKLSETEPLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLE 225
Y Y ++ D PLY H R ED Y+VP F+ D L +Y E +
Sbjct: 117 YIEYMESTRDDS-----PLYIFDSSYGEHPKRRKLLED-YKVPKFFTDD-LFQYAGE--K 167
Query: 226 HKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE----KYFKDSMGN 281
+ YR+ MGP + T +H D + +W+ + G K+W L K ++ GN
Sbjct: 168 RRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTREEGGN 227
Query: 282 LISDMRSVDWSTL--PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISIN 330
+ ++ W + PR + + + Q+ G+++FVP GW H V NL+ TI+I
Sbjct: 228 QQDE--AITWFNIIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAIT 285
Query: 331 HNWINGTNIDHVYHEMV 347
N+ + TN V+H+ V
Sbjct: 286 QNFASSTNFPVVWHKTV 302
>UNIPROTKB|I3L739 [details] [associations]
symbol:JMJD6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070815 "peptidyl-lysine 5-dioxygenase activity"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0048821 "erythrocyte development" evidence=IEA]
[GO:0048024 "regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042116 "macrophage activation" evidence=IEA] [GO:0033749
"histone demethylase activity (H4-R3 specific)" evidence=IEA]
[GO:0033746 "histone demethylase activity (H3-R2 specific)"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0018395 "peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0002040 "sprouting angiogenesis" evidence=IEA]
[GO:0001822 "kidney development" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005886
GO:GO:0006915 GO:GO:0005654 GO:GO:0007507 GO:GO:0005730
GO:GO:0005506 GO:GO:0030324 GO:GO:0003727 GO:GO:0004872
GO:GO:0060041 GO:GO:0001822 GO:GO:0007166 GO:GO:0033077
GO:GO:0042116 GO:GO:0002040 GO:GO:0048821 GO:GO:0048024
GO:GO:0043654 GO:GO:0033746 GO:GO:0033749 GO:GO:0070815
GO:GO:0018395 GeneTree:ENSGT00530000063579 OMA:MHRRKKR
EMBL:FP565487 Ensembl:ENSSSCT00000024695 Uniprot:I3L739
Length = 415
Score = 202 (76.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 70/258 (27%), Positives = 110/258 (42%)
Query: 109 KPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKE 168
KP +L + W++ W E L Y + + N Y M +K
Sbjct: 68 KPVVLLNAQEGWSAQEKWT------LERLKRKYRNQKFKCGEDNDGY-----SVKMKMKY 116
Query: 169 YTIYWQNKIDGKLSETEPLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLE 225
Y Y ++ D PLY H R ED Y VP F+ D L +Y E +
Sbjct: 117 YIEYMESTRDDS-----PLYIFDSSYGEHPKRRKLLED-YTVPKFFTDD-LFQYAGE--K 167
Query: 226 HKDDYRF-VYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE----KYFKDSMG 280
+ YRF +MGP + T +H D + +W+ + G K+W L K ++ G
Sbjct: 168 RRPPYRFWFFMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTREEGG 227
Query: 281 NLISDMRSVDWSTL--PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISI 329
N + ++ W + PR + + + Q+ G+++FVP GW H V NL+ TI+I
Sbjct: 228 NQQDE--AITWFNIIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAI 285
Query: 330 NHNWINGTNIDHVYHEMV 347
N+ + TN V+H+ V
Sbjct: 286 TQNFASSTNFPVVWHKTV 303
>UNIPROTKB|Q6Q4H1 [details] [associations]
symbol:PSR "Bifunctional arginine demethylase and
lysyl-hydroxylase PSR" species:6087 "Hydra vulgaris" [GO:0005634
"nucleus" evidence=IDA] [GO:0018395 "peptidyl-lysine hydroxylation
to 5-hydroxy-L-lysine" evidence=ISS] [GO:0070815 "peptidyl-lysine
5-dioxygenase activity" evidence=ISS] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 GO:GO:0070815 GO:GO:0018395 EMBL:AY559448
ProteinModelPortal:Q6Q4H1 Uniprot:Q6Q4H1
Length = 385
Score = 201 (75.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 61/253 (24%), Positives = 107/253 (42%)
Query: 110 PFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKEY 169
P IL C + W ++ W L+ Y + + V N + M +K Y
Sbjct: 69 PVILTGCTDSWLANQKW------KLSSLAKKYRNQKFKVGEDNDGF-----SVKMKMKYY 117
Query: 170 TIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTE--DIYRVPNVFSSDWLNEYYSEHLEHK 227
Y +++ D PLY + K + D Y P+ F D L +Y E + +
Sbjct: 118 IEYLKHQKDDS-----PLYIFDGSYGEHPKKRKLLDDYHPPSFFQDD-LFKYAGE--KRR 169
Query: 228 DDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFKD--SMGNLISD 285
YR++ +GP + T +H D + +W+ I G K+W++ K+ +
Sbjct: 170 PPYRWIVIGPARSGTGIHIDPLGTSAWNALISGHKRWMMFPTETPKHLLEVSKQDGQHQS 229
Query: 286 MRSVDW----------STLPRDTVII-VEQEAGDSIFVPSGWHHQVTNLEHTISINHNWI 334
+ W T P++ + + Q G+++FVP GW H V NL+ T+++ N+
Sbjct: 230 GEGIQWFVKVYPKVKSPTWPKEYAPLEIIQHPGETVFVPGGWWHVVLNLDQTVAVTQNFS 289
Query: 335 NGTNIDHVYHEMV 347
+ TN V+H+ V
Sbjct: 290 SPTNFHVVWHKTV 302
>UNIPROTKB|F1NGN4 [details] [associations]
symbol:JMJD6 "Bifunctional arginine demethylase and
lysyl-hydroxylase JMJD6" species:9031 "Gallus gallus" [GO:0001822
"kidney development" evidence=IEA] [GO:0002040 "sprouting
angiogenesis" evidence=IEA] [GO:0003727 "single-stranded RNA
binding" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0018395 "peptidyl-lysine
hydroxylation to 5-hydroxy-L-lysine" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0033077 "T cell
differentiation in thymus" evidence=IEA] [GO:0033746 "histone
demethylase activity (H3-R2 specific)" evidence=IEA] [GO:0033749
"histone demethylase activity (H4-R3 specific)" evidence=IEA]
[GO:0042116 "macrophage activation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0043654 "recognition
of apoptotic cell" evidence=IEA] [GO:0048024 "regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0048821 "erythrocyte
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0070815 "peptidyl-lysine
5-dioxygenase activity" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005886
GO:GO:0006915 GO:GO:0005654 GO:GO:0005730 GO:GO:0005506
GO:GO:0003727 GO:GO:0004872 GO:GO:0007166 GO:GO:0042116
GO:GO:0048024 GO:GO:0043277 GO:GO:0033746 GO:GO:0033749
GO:GO:0070815 GO:GO:0018395 GeneTree:ENSGT00530000063579
OMA:MHRRKKR IPI:IPI00576780 EMBL:AADN02029931
Ensembl:ENSGALT00000002784 Uniprot:F1NGN4
Length = 414
Score = 198 (74.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 66/245 (26%), Positives = 106/245 (43%)
Query: 121 NSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKEYTIYWQNKIDGK 180
N+ + W ++ E L Y + + N Y M +K Y Y + D
Sbjct: 74 NAQVGWSAQEKWTLERLKRKYRNQKFKCGEDNDGY-----SVKMKMKYYIEYMETTRDDS 128
Query: 181 LSETEPLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGP 237
PLY H R ED Y+VP F+ D L +Y E + + YR+ MGP
Sbjct: 129 -----PLYIFDSSYGEHPKRRKLLED-YKVPKFFTDD-LFQYAGE--KRRPPYRWFVMGP 179
Query: 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE----KYFKDSMGNLISDMRSVDWST 293
+ T +H D + +W+ + G K+W L K ++ GN + ++ W
Sbjct: 180 PRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTREEGGNQQDE--AITWFN 237
Query: 294 L--PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHV 342
+ PR + + + Q+ G+++FVP GW H V NL+ TI+I N+ + TN V
Sbjct: 238 VIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASCTNFPVV 297
Query: 343 YHEMV 347
+H+ V
Sbjct: 298 WHKTV 302
>UNIPROTKB|Q5ZMK5 [details] [associations]
symbol:JMJD6 "Bifunctional arginine demethylase and
lysyl-hydroxylase JMJD6" species:9031 "Gallus gallus" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0070078 "histone H3-R2 demethylation"
evidence=ISS] [GO:0070079 "histone H4-R3 demethylation"
evidence=ISS] [GO:0070815 "peptidyl-lysine 5-dioxygenase activity"
evidence=ISS] [GO:0018395 "peptidyl-lysine hydroxylation to
5-hydroxy-L-lysine" evidence=ISS] [GO:0048024 "regulation of mRNA
splicing, via spliceosome" evidence=ISS] [GO:0005654 "nucleoplasm"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0003727
"single-stranded RNA binding" evidence=ISS] [GO:0002040 "sprouting
angiogenesis" evidence=ISS] [GO:0033746 "histone demethylase
activity (H3-R2 specific)" evidence=ISS] [GO:0033749 "histone
demethylase activity (H4-R3 specific)" evidence=ISS]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005654 GO:GO:0030154 GO:GO:0005730 GO:GO:0006355
GO:GO:0008380 GO:GO:0046872 GO:GO:0003727 GO:GO:0006397
GO:GO:0006351 GO:GO:0016702 GO:GO:0002040 GO:GO:0048024
eggNOG:NOG124833 KO:K11323 GO:GO:0033746 GO:GO:0033749
GO:GO:0070815 GO:GO:0018395 CTD:23210 HOGENOM:HOG000265824
HOVERGEN:HBG054774 OrthoDB:EOG4VMFFJ EMBL:AJ719379 IPI:IPI00576780
RefSeq:NP_001025874.1 UniGene:Gga.21114 ProteinModelPortal:Q5ZMK5
GeneID:417355 KEGG:gga:417355 InParanoid:Q5ZMK5 NextBio:20820666
Uniprot:Q5ZMK5
Length = 414
Score = 198 (74.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 66/245 (26%), Positives = 106/245 (43%)
Query: 121 NSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKEYTIYWQNKIDGK 180
N+ + W ++ E L Y + + N Y M +K Y Y + D
Sbjct: 74 NAQVGWSAQEKWTLERLKRKYRNQKFKCGEDNDGY-----SVKMKMKYYIEYMETTRDDS 128
Query: 181 LSETEPLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGP 237
PLY H R ED Y+VP F+ D L +Y E + + YR+ MGP
Sbjct: 129 -----PLYIFDSSYGEHPKRRKLLED-YKVPKFFTDD-LFQYAGE--KRRPPYRWFVMGP 179
Query: 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE----KYFKDSMGNLISDMRSVDWST 293
+ T +H D + +W+ + G K+W L K ++ GN + ++ W
Sbjct: 180 PRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVAREEGGNQQDE--AITWFN 237
Query: 294 L--PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHV 342
+ PR + + + Q+ G+++FVP GW H V NL+ TI+I N+ + TN V
Sbjct: 238 VIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASCTNFPVV 297
Query: 343 YHEMV 347
+H+ V
Sbjct: 298 WHKTV 302
>ZFIN|ZDB-GENE-040426-17 [details] [associations]
symbol:jmjd6 "jumonji domain containing 6"
species:7955 "Danio rerio" [GO:0006909 "phagocytosis" evidence=IMP]
[GO:0002040 "sprouting angiogenesis" evidence=ISS] [GO:0003727
"single-stranded RNA binding" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0033749 "histone demethylase activity (H4-R3
specific)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0048024 "regulation of mRNA splicing, via spliceosome"
evidence=ISS] [GO:0070815 "peptidyl-lysine 5-dioxygenase activity"
evidence=ISS] [GO:0033746 "histone demethylase activity (H3-R2
specific)" evidence=ISS] [GO:0018395 "peptidyl-lysine hydroxylation
to 5-hydroxy-L-lysine" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
ZFIN:ZDB-GENE-040426-17 GO:GO:0005654 GO:GO:0030154 GO:GO:0005730
GO:GO:0006355 GO:GO:0008380 GO:GO:0046872 GO:GO:0003727
GO:GO:0006397 GO:GO:0006909 GO:GO:0006351 GO:GO:0016702
GO:GO:0002040 GO:GO:0048024 eggNOG:NOG124833 KO:K11323
GO:GO:0033746 GO:GO:0033749 GO:GO:0070815 GO:GO:0018395
GeneTree:ENSGT00530000063579 CTD:23210 HOGENOM:HOG000265824
HOVERGEN:HBG054774 OMA:MHRRKKR OrthoDB:EOG4VMFFJ EMBL:AF401484
EMBL:AF401485 EMBL:BC057498 IPI:IPI00511096 IPI:IPI00607440
RefSeq:NP_739567.2 UniGene:Dr.86243 ProteinModelPortal:Q6PFM0
Ensembl:ENSDART00000012113 Ensembl:ENSDART00000125169 GeneID:266962
KEGG:dre:266962 InParanoid:Q6PFM0 NextBio:20804838 Bgee:Q6PFM0
Uniprot:Q6PFM0
Length = 403
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 73/275 (26%), Positives = 113/275 (41%)
Query: 92 DPSHIYPYCF-NNFLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVAN 150
D + P F F KP +L + + W + W E L Y + +
Sbjct: 50 DVQRLSPEEFIQRFEKPYKPVVLLNVEDSWPAREKWT------LERLKRKYRNQKFKCGE 103
Query: 151 CNSYYFNAHEKTNMTLKEYTIYWQNKIDGKLSETEPLYYLKDW---HFTRDFKTEDIYRV 207
N Y M +K Y Y ++ D PLY H R ED Y+V
Sbjct: 104 DNDGY-----SVKMKMKYYVEYLESTHDDS-----PLYIFDSSFGEHAKRRKLLED-YQV 152
Query: 208 PNVFSSDWLNEYYSEHLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLL 267
P F D L ++ E + + YR+ MGP + T +H D + +W+ + G K+W L
Sbjct: 153 PLFFRDD-LFQFAGE--KRRPPYRWFVMGPARSGTGIHIDPLGTSAWNALVQGHKRWCLF 209
Query: 268 APGNE----KYFKDSMGNLISDMRSVDW----------STLPRD-TVIIVEQEAGDSIFV 312
K +D GN + ++ W ST P + + + Q G+++FV
Sbjct: 210 PTHTPRELIKVTRDEGGNQQDE--AITWFNVIYPRTQQSTWPDEFRPLEILQRPGETVFV 267
Query: 313 PSGWHHQVTNLEHTISINHNWINGTNIDHVYHEMV 347
P GW H V NL+ TI++ N+ + TN V+H+ V
Sbjct: 268 PGGWWHVVLNLDTTIAVTQNFASTTNFPIVWHKTV 302
>UNIPROTKB|Q623U2 [details] [associations]
symbol:psr-1 "Bifunctional arginine demethylase and
lysyl-hydroxylase psr-1" species:6238 "Caenorhabditis briggsae"
[GO:0005634 "nucleus" evidence=ISS] [GO:0018395 "peptidyl-lysine
hydroxylation to 5-hydroxy-L-lysine" evidence=ISS] [GO:0070815
"peptidyl-lysine 5-dioxygenase activity" evidence=ISS]
InterPro:IPR003347 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 EMBL:HE601298 eggNOG:NOG124833 KO:K11323
GO:GO:0070815 GO:GO:0018395 HOGENOM:HOG000265824 OMA:MHRRKKR
RefSeq:XP_002634158.1 ProteinModelPortal:Q623U2 STRING:Q623U2
EnsemblMetazoa:CBG01722 GeneID:8576153 KEGG:cbr:CBG01722
CTD:8576153 WormBase:CBG01722 Uniprot:Q623U2
Length = 397
Score = 193 (73.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 70/258 (27%), Positives = 111/258 (43%)
Query: 110 PFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAH-EKTNMTLKE 168
P IL ++WN+ W E LS Y + C + H M +K
Sbjct: 74 PVILTGLTDDWNAHEKWT------LERLSKKYRNQNF---KCGE---DDHGNSVRMKMKY 121
Query: 169 YTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDI---YRVPNVFSSDWLNEYYSEHLE 225
Y Y N D PLY D F KT+ + Y+VP F D +Y++H +
Sbjct: 122 YHDYMLNNRDDS-----PLYIF-DSSFAERRKTKKLSEDYKVPKFFEDDLF--HYADH-K 172
Query: 226 HKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPG----------NEKYF 275
+ +R+ MGP + T +H D + +W+ + G K+W+L+ P +EK
Sbjct: 173 KRPPHRWFVMGPARSGTAIHIDPLGTSAWNSLLLGYKRWVLIPPNAPRDLVKPMAHEKGK 232
Query: 276 KDSMG-----NLISDMRSVDWSTLPRDTVII-VEQEAGDSIFVPSGWHHQVTNLEHTISI 329
G + +RS W P++ I Q G+++FVPSGW H V N T+++
Sbjct: 233 HPDEGITWFQTVYKRVRSPAW---PKEYAPIECRQGPGETMFVPSGWWHVVINEGLTVAV 289
Query: 330 NHNWINGTNIDHVYHEMV 347
HN+ + N+ V+ + V
Sbjct: 290 THNYCSVENLHLVWPKTV 307
>TAIR|locus:2144153 [details] [associations]
symbol:AT5G06550 "AT5G06550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0007166 "cell surface receptor
signaling pathway" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0006626 "protein
targeting to mitochondrion" evidence=RCA] [GO:0009909 "regulation
of flower development" evidence=RCA] InterPro:IPR001810
InterPro:IPR003347 PROSITE:PS50181 SMART:SM00558 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF81383 EMBL:AP002543
EMBL:BT012560 EMBL:AK175402 EMBL:AK176695 IPI:IPI00520363
IPI:IPI00845141 RefSeq:NP_196273.3 UniGene:At.49785
ProteinModelPortal:Q67XX3 SMR:Q67XX3 IntAct:Q67XX3 STRING:Q67XX3
PaxDb:Q67XX3 PRIDE:Q67XX3 EnsemblPlants:AT5G06550.1 GeneID:830543
KEGG:ath:AT5G06550 TAIR:At5g06550 eggNOG:NOG124833
HOGENOM:HOG000195370 InParanoid:Q67XX3 OMA:KLWVMLP PhylomeDB:Q67XX3
ProtClustDB:CLSN2681636 Genevestigator:Q67XX3 Uniprot:Q67XX3
Length = 502
Score = 192 (72.6 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 73/256 (28%), Positives = 111/256 (43%)
Query: 104 FLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTN 163
F NKP +L+ C++ W + W + +YL+ GD+E V
Sbjct: 209 FEEPNKPVLLEGCLDGWPAIEKWSR------DYLTKVVGDVEFAVG-----------PVE 251
Query: 164 MTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDI-YRVPNVFSSDWLNEYYSE 222
M L++Y Y DG E PLY L D F D Y VP F D +E
Sbjct: 252 MKLEKYFRY----SDGAREE-RPLY-LFDPKFAEKVPVLDSEYDVPVYFREDLFGVLGNE 305
Query: 223 HLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAP------------G 270
+ DYR++ +GP + + H D + +W+ I G K+W+L P G
Sbjct: 306 ----RPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVITGSKKWVLFPPDVVPPGVHPSPDG 361
Query: 271 NEKYFKDSM----GNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHT 326
E S+ N D + DW P + + +AG+ +FVP+GW H V NLE +
Sbjct: 362 AEVACPVSIIEWFMNFYDDTK--DWEKKPIECIC----KAGEVMFVPNGWWHLVINLEES 415
Query: 327 ISINHNWINGTNIDHV 342
I+I N+ + +N+ +V
Sbjct: 416 IAITQNYASRSNLLNV 431
>UNIPROTKB|Q6GND3 [details] [associations]
symbol:jmjd6-a "Bifunctional arginine demethylase and
lysyl-hydroxylase JMJD6-A" species:8355 "Xenopus laevis"
[GO:0002040 "sprouting angiogenesis" evidence=ISS] [GO:0003727
"single-stranded RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0018395 "peptidyl-lysine
hydroxylation to 5-hydroxy-L-lysine" evidence=ISS] [GO:0033746
"histone demethylase activity (H3-R2 specific)" evidence=ISS]
[GO:0033749 "histone demethylase activity (H4-R3 specific)"
evidence=ISS] [GO:0048024 "regulation of mRNA splicing, via
spliceosome" evidence=ISS] [GO:0070078 "histone H3-R2
demethylation" evidence=ISS] [GO:0070079 "histone H4-R3
demethylation" evidence=ISS] [GO:0070815 "peptidyl-lysine
5-dioxygenase activity" evidence=ISS] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005654
GO:GO:0030154 GO:GO:0005730 GO:GO:0006355 GO:GO:0008380
GO:GO:0046872 GO:GO:0003727 GO:GO:0006397 GO:GO:0006351
GO:GO:0016702 GO:GO:0002040 GO:GO:0048024 EMBL:BC073581
RefSeq:NP_001085948.1 UniGene:Xl.16707 ProteinModelPortal:Q6GND3
GeneID:444377 KEGG:xla:444377 CTD:444377 Xenbase:XB-GENE-6255376
KO:K11323 GO:GO:0033746 GO:GO:0033749 GO:GO:0070815 GO:GO:0018395
Uniprot:Q6GND3
Length = 403
Score = 187 (70.9 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 74/301 (24%), Positives = 123/301 (40%)
Query: 69 DSCNSN--EQINVTTTALPQVDYNIDPSHIYPYCF-NNFLSKNKPFILKSCVNEWNSSLH 125
D C N E ++ + + D +H+ F + + KP ++ + +W +
Sbjct: 25 DWCRHNYCEVFSLNPSTVRDNVERADDAHLSIEEFIDRYEKPYKPVVIVNATADWPAQEK 84
Query: 126 WVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKEYTIYWQNKIDGKLSETE 185
W E L Y + + N Y M +K Y Y + D
Sbjct: 85 WT------LERLKRKYRNQKFKCGEDNDGY-----SVKMKMKYYIDYMEGTRDDS----- 128
Query: 186 PLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGPKETWT 242
PLY H R ED Y VP F D L ++ E + + YR+ MGP + T
Sbjct: 129 PLYIFDSSYGEHPKRKKLLED-YEVPKYFRDD-LFQFAGE--KRRPPYRWFVMGPARSGT 184
Query: 243 PLHADVFHSYSWSVNICGRKQWLLLAPGNE-----KYFKDSMGNLISDMRSVDWSTL--P 295
+H D + +W+ + G K+W L P N K +D GN + ++ W + P
Sbjct: 185 GIHIDPLGTSAWNSLVHGHKRWCLF-PTNTPRELIKVTRDEGGNQQDE--AITWFNVIYP 241
Query: 296 RDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDHVYHEM 346
R + + + Q+ G+++FVP GW H V NL+ I++ N+ + +N V+H+
Sbjct: 242 RTQLPSWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTAIAVTQNFASCSNFPVVWHKT 301
Query: 347 V 347
V
Sbjct: 302 V 302
>UNIPROTKB|Q7ZX37 [details] [associations]
symbol:jmjd6-b "Bifunctional arginine demethylase and
lysyl-hydroxylase JMJD6-B" species:8355 "Xenopus laevis"
[GO:0002040 "sprouting angiogenesis" evidence=ISS] [GO:0003727
"single-stranded RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0018395 "peptidyl-lysine
hydroxylation to 5-hydroxy-L-lysine" evidence=ISS] [GO:0033746
"histone demethylase activity (H3-R2 specific)" evidence=ISS]
[GO:0033749 "histone demethylase activity (H4-R3 specific)"
evidence=ISS] [GO:0048024 "regulation of mRNA splicing, via
spliceosome" evidence=ISS] [GO:0070078 "histone H3-R2
demethylation" evidence=ISS] [GO:0070079 "histone H4-R3
demethylation" evidence=ISS] [GO:0070815 "peptidyl-lysine
5-dioxygenase activity" evidence=ISS] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005654
GO:GO:0030154 GO:GO:0005730 GO:GO:0006355 GO:GO:0008380
GO:GO:0046872 GO:GO:0003727 GO:GO:0006397 GO:GO:0006351
GO:GO:0016702 GO:GO:0002040 GO:GO:0048024 KO:K11323 GO:GO:0033746
GO:GO:0033749 GO:GO:0070815 GO:GO:0018395 EMBL:BC045252
RefSeq:NP_001080514.1 UniGene:Xl.16315 ProteinModelPortal:Q7ZX37
GeneID:380206 KEGG:xla:380206 CTD:380206 Xenbase:XB-GENE-6078236
Uniprot:Q7ZX37
Length = 403
Score = 185 (70.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 65/246 (26%), Positives = 105/246 (42%)
Query: 121 NSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKEYTIYWQNKIDGK 180
N++ W N++ E L Y + + N Y M +K Y Y + D
Sbjct: 74 NATAGWPANEKWTLERLKRKYRNQKFKCGEDNDGY-----SVKMKMKYYIDYMEGTRDDS 128
Query: 181 LSETEPLYYLKDW---HFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGP 237
PLY H R ED Y VP F D L ++ E + + YR+ MGP
Sbjct: 129 -----PLYIFDSSYGEHPKRKKILED-YEVPKYFRDD-LFQFTGE--KRRPPYRWFVMGP 179
Query: 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNE-----KYFKDSMGNLISDMRSVDWS 292
+ T +H D + +W+ + G K+W L P N K +D GN + ++ W
Sbjct: 180 PRSGTGIHIDPLGTSAWNSLVHGHKRWCLF-PTNTPRELIKVTRDEGGNQQDE--AITWF 236
Query: 293 TL--PRDTV---------IIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGTNIDH 341
+ PR + + + Q+ G+++FVP GW H V N + I++ N+ + +N
Sbjct: 237 NVVYPRTQLPSWPPEFKPLEILQKPGETVFVPGGWWHVVLNFDTAIAVTQNFASCSNFPV 296
Query: 342 VYHEMV 347
V+H+ V
Sbjct: 297 VWHKTV 302
>WB|WBGene00004205 [details] [associations]
symbol:psr-1 species:6239 "Caenorhabditis elegans"
[GO:0043652 "engulfment of apoptotic cell" evidence=IGI;IMP;IDA]
[GO:0001786 "phosphatidylserine binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
GO:GO:0001786 GO:GO:0043652 eggNOG:NOG124833 KO:K11323
GO:GO:0070815 GO:GO:0018395 GeneTree:ENSGT00530000063579
HOGENOM:HOG000265824 OMA:MHRRKKR EMBL:FO081255
RefSeq:NP_001040940.1 ProteinModelPortal:Q9GYI4 SMR:Q9GYI4
DIP:DIP-24340N IntAct:Q9GYI4 MINT:MINT-1073364 STRING:Q9GYI4
EnsemblMetazoa:F29B9.4a.1 EnsemblMetazoa:F29B9.4a.2 GeneID:177229
KEGG:cel:CELE_F29B9.4 UCSC:F29B9.4a.1 CTD:177229 WormBase:F29B9.4a
InParanoid:Q9GYI4 NextBio:895892 ArrayExpress:Q9GYI4 Uniprot:Q9GYI4
Length = 400
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 164 MTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDI---YRVPNVFSSDWLNEYY 220
M +K Y Y N D PLY D F KT+ + Y VP F D +Y
Sbjct: 117 MKMKYYHDYMLNNKDDS-----PLYIF-DSSFAERRKTKKLSEDYSVPKFFEDDLF--HY 168
Query: 221 SEHLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAP----------G 270
++ + + +R+ MGP + T +H D + +W+ + G K+W+L+ P
Sbjct: 169 ADD-KKRPPHRWFVMGPARSGTAIHIDPLGTSAWNSLLQGHKRWVLIPPIAPRDLVKPMA 227
Query: 271 NEKYFKDSMG-----NLISDMRSVDWSTLPRDTVII-VEQEAGDSIFVPSGWHHQVTNLE 324
+EK G + +RS W P++ I Q G+++FVPSGW H V N E
Sbjct: 228 HEKGKHPDEGITWFQTVYKRVRSPSW---PKEYAPIECRQGPGETMFVPSGWWHVVINEE 284
Query: 325 HTISINHNWINGTNIDHVYHEMV 347
+TI++ HN+ + N+ V+ + V
Sbjct: 285 YTIAVTHNYCSVENLHLVWPKTV 307
>UNIPROTKB|Q9GYI4 [details] [associations]
symbol:psr-1 "Bifunctional arginine demethylase and
lysyl-hydroxylase psr-1" species:6239 "Caenorhabditis elegans"
[GO:0018395 "peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070815 "peptidyl-lysine 5-dioxygenase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
GO:GO:0001786 GO:GO:0043652 eggNOG:NOG124833 KO:K11323
GO:GO:0070815 GO:GO:0018395 GeneTree:ENSGT00530000063579
HOGENOM:HOG000265824 OMA:MHRRKKR EMBL:FO081255
RefSeq:NP_001040940.1 ProteinModelPortal:Q9GYI4 SMR:Q9GYI4
DIP:DIP-24340N IntAct:Q9GYI4 MINT:MINT-1073364 STRING:Q9GYI4
EnsemblMetazoa:F29B9.4a.1 EnsemblMetazoa:F29B9.4a.2 GeneID:177229
KEGG:cel:CELE_F29B9.4 UCSC:F29B9.4a.1 CTD:177229 WormBase:F29B9.4a
InParanoid:Q9GYI4 NextBio:895892 ArrayExpress:Q9GYI4 Uniprot:Q9GYI4
Length = 400
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 164 MTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDI---YRVPNVFSSDWLNEYY 220
M +K Y Y N D PLY D F KT+ + Y VP F D +Y
Sbjct: 117 MKMKYYHDYMLNNKDDS-----PLYIF-DSSFAERRKTKKLSEDYSVPKFFEDDLF--HY 168
Query: 221 SEHLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAP----------G 270
++ + + +R+ MGP + T +H D + +W+ + G K+W+L+ P
Sbjct: 169 ADD-KKRPPHRWFVMGPARSGTAIHIDPLGTSAWNSLLQGHKRWVLIPPIAPRDLVKPMA 227
Query: 271 NEKYFKDSMG-----NLISDMRSVDWSTLPRDTVII-VEQEAGDSIFVPSGWHHQVTNLE 324
+EK G + +RS W P++ I Q G+++FVPSGW H V N E
Sbjct: 228 HEKGKHPDEGITWFQTVYKRVRSPSW---PKEYAPIECRQGPGETMFVPSGWWHVVINEE 284
Query: 325 HTISINHNWINGTNIDHVYHEMV 347
+TI++ HN+ + N+ V+ + V
Sbjct: 285 YTIAVTHNYCSVENLHLVWPKTV 307
>FB|FBgn0037883 [details] [associations]
symbol:CG14701 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:AE014297 GO:GO:0046872 InterPro:IPR007872
Pfam:PF05207 PROSITE:PS51074 KO:K15455 eggNOG:COG5216
GeneTree:ENSGT00390000007225 OMA:PCGDRFQ EMBL:BT023695
RefSeq:NP_650057.1 UniGene:Dm.34077 ProteinModelPortal:Q9VGQ9
SMR:Q9VGQ9 STRING:Q9VGQ9 EnsemblMetazoa:FBtr0082353 GeneID:41352
KEGG:dme:Dmel_CG14701 UCSC:CG14701-RA FlyBase:FBgn0037883
InParanoid:Q9VGQ9 OrthoDB:EOG4VDNG9 PhylomeDB:Q9VGQ9
GenomeRNAi:41352 NextBio:823425 Bgee:Q9VGQ9 GermOnline:CG14701
Uniprot:Q9VGQ9
Length = 86
Score = 149 (57.5 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGDRFQI+KE+L GE+VATCP+CSL+IK
Sbjct: 25 PCPCGDRFQISKEELIEGEEVATCPSCSLVIK 56
>UNIPROTKB|Q96FX2 [details] [associations]
symbol:DPH3 "DPH3 homolog" species:9606 "Homo sapiens"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051099
"positive regulation of binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0017183 "peptidyl-diphthamide
biosynthetic process from peptidyl-histidine" evidence=ISS]
[GO:0050709 "negative regulation of protein secretion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0050709 GO:GO:0051099
InterPro:IPR007872 Pfam:PF05207 PROSITE:PS51074 GO:GO:0017183
HOVERGEN:HBG056007 KO:K15455 CTD:285381 eggNOG:COG5216
HOGENOM:HOG000190740 OMA:PCGDRFQ OrthoDB:EOG4VQ9QW EMBL:AK022970
EMBL:BC010181 IPI:IPI00401015 IPI:IPI00514553 RefSeq:NP_001040899.1
RefSeq:NP_996662.1 UniGene:Hs.388087 PDB:2JR7 PDBsum:2JR7
ProteinModelPortal:Q96FX2 SMR:Q96FX2 IntAct:Q96FX2 STRING:Q96FX2
DMDM:29611922 PRIDE:Q96FX2 DNASU:285381 Ensembl:ENST00000383775
Ensembl:ENST00000488423 GeneID:285381 KEGG:hsa:285381
UCSC:uc003cau.3 UCSC:uc003cav.3 GeneCards:GC03M016298
HGNC:HGNC:27717 HPA:HPA035287 MIM:608959 neXtProt:NX_Q96FX2
PharmGKB:PA162384061 InParanoid:Q96FX2 PhylomeDB:Q96FX2
EvolutionaryTrace:Q96FX2 GenomeRNAi:285381 NextBio:95485
Bgee:Q96FX2 CleanEx:HS_DPH3 Genevestigator:Q96FX2
GermOnline:ENSG00000154813 Uniprot:Q96FX2
Length = 82
Score = 149 (57.5 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 26/32 (81%), Positives = 28/32 (87%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGD F ITKE L+ GEDVATCP+CSLIIK
Sbjct: 25 PCPCGDNFSITKEDLENGEDVATCPSCSLIIK 56
>UNIPROTKB|Q6VUC1 [details] [associations]
symbol:DPH3 "DPH3 homolog" species:10029 "Cricetulus
griseus" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0017183 "peptidyl-diphthamide
biosynthetic process from peptidyl-histidine" evidence=IDA]
[GO:0050709 "negative regulation of protein secretion"
evidence=ISS] [GO:0051099 "positive regulation of binding"
evidence=ISS] GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0050709 GO:GO:0051099 InterPro:IPR007872 Pfam:PF05207
PROSITE:PS51074 GO:GO:0017183 HOVERGEN:HBG056007 CTD:285381
OrthoDB:EOG4VQ9QW EMBL:AY326451 RefSeq:NP_001231467.1
RefSeq:XP_003495350.1 ProteinModelPortal:Q6VUC1 SMR:Q6VUC1
GeneID:100689295 GeneID:100768092 Uniprot:Q6VUC1
Length = 82
Score = 149 (57.5 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 26/32 (81%), Positives = 28/32 (87%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGD F ITKE L+ GEDVATCP+CSLIIK
Sbjct: 25 PCPCGDNFSITKEDLENGEDVATCPSCSLIIK 56
>RGD|1590566 [details] [associations]
symbol:Dph3 "DPH3, KTI11 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0050709 "negative
regulation of protein secretion" evidence=IEA;ISO] [GO:0051099
"positive regulation of binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] RGD:1590566 GO:GO:0005634 GO:GO:0005737
GO:GO:0050709 GO:GO:0051099 InterPro:IPR007872 Pfam:PF05207
PROSITE:PS51074 KO:K15455 CTD:285381 GeneTree:ENSGT00390000007225
OMA:PCGDRFQ OrthoDB:EOG4VQ9QW IPI:IPI00201202 RefSeq:NP_001128322.1
UniGene:Rn.3536 ProteinModelPortal:D4A0Z4
Ensembl:ENSRNOT00000026742 GeneID:680594 KEGG:rno:680594
UCSC:RGD:1590566 NextBio:719061 ArrayExpress:D4A0Z4 Uniprot:D4A0Z4
Length = 82
Score = 149 (57.5 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 26/32 (81%), Positives = 28/32 (87%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGD F ITKE L+ GEDVATCP+CSLIIK
Sbjct: 25 PCPCGDNFSITKEDLENGEDVATCPSCSLIIK 56
>MGI|MGI:1922658 [details] [associations]
symbol:Dph3 "DPH3 homolog (KTI11, S. cerevisiae)"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=ISO] [GO:0051099 "positive regulation of
binding" evidence=ISO] MGI:MGI:1922658 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0050709 GO:GO:0051099 InterPro:IPR007872
Pfam:PF05207 PROSITE:PS51074 GO:GO:0017183 HOVERGEN:HBG056007
KO:K15455 CTD:285381 eggNOG:COG5216 GeneTree:ENSGT00390000007225
HOGENOM:HOG000190740 OMA:PCGDRFQ OrthoDB:EOG4VQ9QW EMBL:AK048097
EMBL:AK011448 EMBL:BC029910 EMBL:BC039954 IPI:IPI00169683
RefSeq:NP_758458.1 UniGene:Mm.2519 PDB:1WGE PDBsum:1WGE
ProteinModelPortal:Q8K0W9 SMR:Q8K0W9 STRING:Q8K0W9 PRIDE:Q8K0W9
Ensembl:ENSMUST00000022461 Ensembl:ENSMUST00000067955 GeneID:105638
KEGG:mmu:105638 UCSC:uc007syc.1 InParanoid:Q8K0W9
EvolutionaryTrace:Q8K0W9 NextBio:357802 Bgee:Q8K0W9 CleanEx:MM_DPH3
Genevestigator:Q8K0W9 GermOnline:ENSMUSG00000021905 Uniprot:Q8K0W9
Length = 82
Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/32 (81%), Positives = 28/32 (87%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGD F ITKE L+ GEDVATCP+CSLIIK
Sbjct: 25 PCPCGDNFAITKEDLENGEDVATCPSCSLIIK 56
>ZFIN|ZDB-GENE-050522-545 [details] [associations]
symbol:zgc:112231 "zgc:112231" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-050522-545 InterPro:IPR007872 Pfam:PF05207
PROSITE:PS51074 HOVERGEN:HBG056007 KO:K15455 eggNOG:COG5216
GeneTree:ENSGT00390000007225 HOGENOM:HOG000190740 OMA:PCGDRFQ
OrthoDB:EOG4VQ9QW EMBL:CR936426 EMBL:BC095696 IPI:IPI00607477
RefSeq:NP_001153296.1 UniGene:Dr.90599 SMR:Q502H4 STRING:Q502H4
Ensembl:ENSDART00000063644 GeneID:553692 KEGG:dre:553692
InParanoid:Q502H4 NextBio:20880423 Uniprot:Q502H4
Length = 85
Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGDRF ITKE L+ GE+VATCP+CSLI+K
Sbjct: 25 PCPCGDRFAITKEDLENGEEVATCPSCSLIVK 56
>CGD|CAL0000230 [details] [associations]
symbol:orf19.551 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001810 InterPro:IPR003347 PROSITE:PS51184 SMART:SM00256
SMART:SM00558 CGD:CAL0000230 SUPFAM:SSF81383 EMBL:AACQ01000055
eggNOG:NOG124833 RefSeq:XP_717414.1 ProteinModelPortal:Q5A6K3
GeneID:3640950 KEGG:cal:CaO19.551 Uniprot:Q5A6K3
Length = 552
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/217 (24%), Positives = 95/217 (43%)
Query: 160 EKTNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSSDWLNEY 219
E + L++Y+ Y N D PLY L D + Y+VP +F D +
Sbjct: 235 EAVSWDLQKYSQYLHNNKD-----ENPLY-LFDCKSDAMKVLKQEYKVPEIFQDDLFTVF 288
Query: 220 YSEHLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKY---FK 276
S+ + D+ ++ MG + + H D + +W+ I GRK W++L P
Sbjct: 289 NSKQFNCRPDHAWIIMGSARSGSTFHKDPNSTSAWNAAIQGRKLWVMLPPHMTPPGVGTD 348
Query: 277 DSMGNLISDMRSVDW--STLPRDTVIIVE-----QEAGDSIFVPSGWHHQVTNLEHTISI 329
+ + S + +W S D+ I E G+ ++VPSGW H V N++ +I+I
Sbjct: 349 EEESEVTSPVSVAEWVISGFFNDSTKIDECLIGITFPGECMYVPSGWWHTVINIDDSIAI 408
Query: 330 NHNWINGTNIDHVYHEMVSHLEAVK----KEIDDCKD 362
N++ + + V + + + + + KEI C D
Sbjct: 409 TQNFVPKSKLAEVLNFLKNKPKQISGFRLKEIKQCLD 445
>UNIPROTKB|Q5A6K3 [details] [associations]
symbol:CaO19.551 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001810 InterPro:IPR003347 PROSITE:PS51184 SMART:SM00256
SMART:SM00558 CGD:CAL0000230 SUPFAM:SSF81383 EMBL:AACQ01000055
eggNOG:NOG124833 RefSeq:XP_717414.1 ProteinModelPortal:Q5A6K3
GeneID:3640950 KEGG:cal:CaO19.551 Uniprot:Q5A6K3
Length = 552
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/217 (24%), Positives = 95/217 (43%)
Query: 160 EKTNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSSDWLNEY 219
E + L++Y+ Y N D PLY L D + Y+VP +F D +
Sbjct: 235 EAVSWDLQKYSQYLHNNKD-----ENPLY-LFDCKSDAMKVLKQEYKVPEIFQDDLFTVF 288
Query: 220 YSEHLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKY---FK 276
S+ + D+ ++ MG + + H D + +W+ I GRK W++L P
Sbjct: 289 NSKQFNCRPDHAWIIMGSARSGSTFHKDPNSTSAWNAAIQGRKLWVMLPPHMTPPGVGTD 348
Query: 277 DSMGNLISDMRSVDW--STLPRDTVIIVE-----QEAGDSIFVPSGWHHQVTNLEHTISI 329
+ + S + +W S D+ I E G+ ++VPSGW H V N++ +I+I
Sbjct: 349 EEESEVTSPVSVAEWVISGFFNDSTKIDECLIGITFPGECMYVPSGWWHTVINIDDSIAI 408
Query: 330 NHNWINGTNIDHVYHEMVSHLEAVK----KEIDDCKD 362
N++ + + V + + + + + KEI C D
Sbjct: 409 TQNFVPKSKLAEVLNFLKNKPKQISGFRLKEIKQCLD 445
>UNIPROTKB|Q1LZC9 [details] [associations]
symbol:DPH3 "DPH3 homolog" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051099 "positive regulation of binding"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0050709 GO:GO:0051099 InterPro:IPR007872 Pfam:PF05207
PROSITE:PS51074 HOVERGEN:HBG056007 KO:K15455 EMBL:BC116080
IPI:IPI00690061 RefSeq:NP_001106770.1 UniGene:Bt.61023
ProteinModelPortal:Q1LZC9 SMR:Q1LZC9 STRING:Q1LZC9
Ensembl:ENSBTAT00000005113 GeneID:511579 KEGG:bta:511579 CTD:285381
eggNOG:COG5216 GeneTree:ENSGT00390000007225 HOGENOM:HOG000190740
InParanoid:Q1LZC9 OMA:PCGDRFQ OrthoDB:EOG4VQ9QW NextBio:20869996
Uniprot:Q1LZC9
Length = 82
Score = 146 (56.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 26/32 (81%), Positives = 28/32 (87%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGD F ITKE L+ GEDVATCP+CSLIIK
Sbjct: 25 PCPCGDNFCITKEDLENGEDVATCPSCSLIIK 56
>UNIPROTKB|E2R4V8 [details] [associations]
symbol:DPH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051099 "positive regulation of binding"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0005737
GO:GO:0050709 GO:GO:0051099 InterPro:IPR007872 Pfam:PF05207
PROSITE:PS51074 KO:K15455 CTD:285381 GeneTree:ENSGT00390000007225
OMA:PCGDRFQ EMBL:AAEX03013584 RefSeq:XP_853149.1
ProteinModelPortal:E2R4V8 Ensembl:ENSCAFT00000009475 GeneID:610533
KEGG:cfa:610533 NextBio:20896089 Uniprot:E2R4V8
Length = 82
Score = 146 (56.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 26/32 (81%), Positives = 28/32 (87%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGD F ITKE L+ GEDVATCP+CSLIIK
Sbjct: 25 PCPCGDNFCITKEDLENGEDVATCPSCSLIIK 56
>UNIPROTKB|E1BRJ8 [details] [associations]
symbol:DPH3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0051099 "positive regulation of
binding" evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0050709
GO:GO:0051099 InterPro:IPR007872 Pfam:PF05207 PROSITE:PS51074
GeneTree:ENSGT00390000007225 OMA:PCGDRFQ EMBL:AADN02001032
EMBL:AADN02001031 IPI:IPI00576989 ProteinModelPortal:E1BRJ8
Ensembl:ENSGALT00000018327 NextBio:20823527 Uniprot:E1BRJ8
Length = 82
Score = 144 (55.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGDRF IT+E L+ GEDVATCP+CSLI++
Sbjct: 25 PCPCGDRFLITREDLENGEDVATCPSCSLILR 56
>DICTYBASE|DDB_G0280485 [details] [associations]
symbol:jcdH "transcription factor jumonji, jmjC
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003347 PROSITE:PS51184 SMART:SM00558
dictyBase:DDB_G0280485 GenomeReviews:CM000152_GR EMBL:AAFI02000036
eggNOG:NOG124833 OMA:KLWVMLP RefSeq:XP_641202.1
ProteinModelPortal:Q54VA7 EnsemblProtists:DDB0238368 GeneID:8622583
KEGG:ddi:DDB_G0280485 Uniprot:Q54VA7
Length = 536
Score = 119 (46.9 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 306 AGDSIFVPSGWHHQVTNLEHTISINHNWINGTNI 339
AG+ IFVPSGW+H V NLE +I+I HN+I+ N+
Sbjct: 415 AGEMIFVPSGWYHSVLNLEESIAITHNFIDSNNL 448
Score = 94 (38.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 206 RVPNVFSSDWLNEYYSEHL-----EHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICG 260
+VP++ + Y+ E L + + +R++ GP + H D H+ +W+ I G
Sbjct: 246 KVPSLLEDYSADAYFKEDLFNVLGDKRPSFRWLLAGPPRSGASFHKDPNHTSAWNAVITG 305
Query: 261 RKQWLLLAP 269
RK+W++ P
Sbjct: 306 RKKWIMYPP 314
Score = 78 (32.5 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 104 FLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPV-----ANCNSY-YFN 157
+L NKP I+ +W +S +W + E L+ GD+++ + N + Y++
Sbjct: 174 YLIPNKPVIISDACKDWAASKNWTR------ETLAEKCGDVKLYINAGVFMNVKDFFYYS 227
Query: 158 AHEKTNMTLKEYTIYWQNKIDGKLSETEPLYYLKD 192
H K M + + Y+ K+ L + Y K+
Sbjct: 228 EHCKEEMPMYLFDHYYGEKVPSLLEDYSADAYFKE 262
Score = 51 (23.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 40/141 (28%), Positives = 57/141 (40%)
Query: 161 KTNMTLKEYTIYWQNKIDGKLSETEPLYY---LKDW----HFTRDFKTE---DI--YRVP 208
+TN+T +E+T + L +P+ KDW ++TR+ E D+ Y
Sbjct: 162 RTNLTFEEFTREY-------LIPNKPVIISDACKDWAASKNWTRETLAEKCGDVKLYINA 214
Query: 209 NVFSS--DWLNEYYSEHL-EHKDDYRFV-YMGPK--ETWTPLHADVFHSYSWSVNICGRK 262
VF + D+ YYSEH E Y F Y G K AD + N+ G K
Sbjct: 215 GVFMNVKDFF--YYSEHCKEEMPMYLFDHYYGEKVPSLLEDYSADAYFKEDL-FNVLGDK 271
Query: 263 Q----WLLLAP--GNEKYFKD 277
+ WLL P + KD
Sbjct: 272 RPSFRWLLAGPPRSGASFHKD 292
Score = 42 (19.8 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 272 EKYFKDSMGNLISDMR-SVDW 291
+ YFK+ + N++ D R S W
Sbjct: 257 DAYFKEDLFNVLGDKRPSFRW 277
>UNIPROTKB|F1RS79 [details] [associations]
symbol:DPH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051099 "positive regulation of binding" evidence=IEA]
[GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0050709
GO:GO:0051099 InterPro:IPR007872 Pfam:PF05207 PROSITE:PS51074
KO:K15455 CTD:285381 GeneTree:ENSGT00390000007225 OMA:PCGDRFQ
EMBL:CU466353 RefSeq:NP_001230545.1 UniGene:Ssc.10818
ProteinModelPortal:F1RS79 Ensembl:ENSSSCT00000012261
GeneID:100156362 KEGG:ssc:100156362 Uniprot:F1RS79
Length = 82
Score = 143 (55.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGD F ITKE L+ GEDVATCP+CSLII+
Sbjct: 25 PCPCGDNFCITKEDLENGEDVATCPSCSLIIR 56
>WB|WBGene00010484 [details] [associations]
symbol:dph-3 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] GO:GO:0009792
GO:GO:0046872 EMBL:Z68218 InterPro:IPR007872 Pfam:PF05207
PROSITE:PS51074 KO:K15455 eggNOG:COG5216
GeneTree:ENSGT00390000007225 HOGENOM:HOG000190740 OMA:PCGDRFQ
PIR:T23206 RefSeq:NP_001255419.1 ProteinModelPortal:Q21102
SMR:Q21102 STRING:Q21102 PaxDb:Q21102 EnsemblMetazoa:K01H12.1a
GeneID:186854 KEGG:cel:CELE_K01H12.1 UCSC:K01H12.1 CTD:186854
WormBase:K01H12.1a InParanoid:Q21102 NextBio:933214
ArrayExpress:Q21102 Uniprot:Q21102
Length = 80
Score = 137 (53.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGDRF+I +E L+ GEDVA CP+CSL+I+
Sbjct: 25 PCPCGDRFEIPREMLEMGEDVAQCPSCSLLIR 56
>POMBASE|SPAC8F11.02c [details] [associations]
symbol:dph3 "diphthamide biosynthesis protein Dph3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002098
"tRNA wobble uridine modification" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0017183
"peptidyl-diphthamide biosynthetic process from peptidyl-histidine"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
PomBase:SPAC8F11.02c GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0002098
InterPro:IPR007872 Pfam:PF05207 PROSITE:PS51074 GO:GO:0017183
KO:K15455 eggNOG:COG5216 HOGENOM:HOG000190740 OMA:PCGDRFQ
PIR:T39177 RefSeq:NP_593951.1 ProteinModelPortal:Q9UT33 SMR:Q9UT33
STRING:Q9UT33 EnsemblFungi:SPAC8F11.02c.1 GeneID:2543434
KEGG:spo:SPAC8F11.02c OrthoDB:EOG42VCS2 NextBio:20804447
Uniprot:Q9UT33
Length = 79
Score = 136 (52.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGDRF+I+ E L+ GEDVA CP+CSLI++
Sbjct: 24 PCPCGDRFEISLEDLQLGEDVARCPSCSLIVR 55
>UNIPROTKB|Q9H4G8 [details] [associations]
symbol:DPH3P1 "Putative DPH3 homolog B" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
GO:GO:0046872 EMBL:AL035669 InterPro:IPR007872 Pfam:PF05207
PROSITE:PS51074 IPI:IPI00032760 RefSeq:NP_542788.1
UniGene:Hs.126248 ProteinModelPortal:Q9H4G8 SMR:Q9H4G8
DMDM:29611779 PRIDE:Q9H4G8 GeneID:100132911 KEGG:hsa:100132911
UCSC:uc011aan.1 CTD:100132911 GeneCards:GC20P061477 HGNC:HGNC:16136
neXtProt:NX_Q9H4G8 PharmGKB:PA165392349 PharmGKB:PA25686
HOVERGEN:HBG056007 KO:K15455 PhylomeDB:Q9H4G8 GenomeRNAi:100132911
NextBio:20789288 Genevestigator:Q9H4G8 GermOnline:ENSG00000183499
Uniprot:Q9H4G8
Length = 78
Score = 135 (52.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 24/32 (75%), Positives = 26/32 (81%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGD F ITKE+L+ GE VA CP CSLIIK
Sbjct: 25 PCPCGDNFSITKEELENGEGVAMCPGCSLIIK 56
>DICTYBASE|DDB_G0277061 [details] [associations]
symbol:dph3 "diphthamide biosynthesis protein 3"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0017183 "peptidyl-diphthamide
biosynthetic process from peptidyl-histidine" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] dictyBase:DDB_G0277061
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000019
InterPro:IPR007872 Pfam:PF05207 PROSITE:PS51074 GO:GO:0017183
KO:K15455 eggNOG:COG5216 ProtClustDB:CLSZ2846578 RefSeq:XP_642910.1
ProteinModelPortal:Q7KWL8 STRING:Q7KWL8 EnsemblProtists:DDB0238862
GeneID:8620776 KEGG:ddi:DDB_G0277061 OMA:DSTSFYD Uniprot:Q7KWL8
Length = 175
Score = 134 (52.2 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 20/32 (62%), Positives = 29/32 (90%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGDRF+IT+E++ GE++A CP+CSL++K
Sbjct: 129 PCPCGDRFRITEEEILQGEEIAICPSCSLLLK 160
>TAIR|locus:2044606 [details] [associations]
symbol:AT2G15910 "AT2G15910" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC006438 InterPro:IPR007872
Pfam:PF05207 PROSITE:PS51074 KO:K15455 IPI:IPI00530646 PIR:F84534
RefSeq:NP_179191.1 UniGene:At.48478 UniGene:At.48479
ProteinModelPortal:Q9XIM2 SMR:Q9XIM2 PRIDE:Q9XIM2
EnsemblPlants:AT2G15910.1 GeneID:816087 KEGG:ath:AT2G15910
TAIR:At2g15910 HOGENOM:HOG000153857 InParanoid:Q9XIM2 OMA:EEIANCP
PhylomeDB:Q9XIM2 ProtClustDB:CLSN2913165 Genevestigator:Q9XIM2
Uniprot:Q9XIM2
Length = 367
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIKPSVIKSVMLMLSDSCNSNE 75
PCPCGD FQITKE L+ GE++A CP+CSL I +VI ++ +D+ +NE
Sbjct: 23 PCPCGDLFQITKEDLRLGEEIANCPSCSLYI--TVIYNMEDFQNDTKKNNE 71
>UNIPROTKB|G4MKL9 [details] [associations]
symbol:MGG_04401 "F-box and JmjC domain-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR001810 InterPro:IPR003347
PROSITE:PS51184 SMART:SM00558 SUPFAM:SSF81383 EMBL:CM001231
GO:GO:0043581 RefSeq:XP_003711014.1 EnsemblFungi:MGG_04401T0
GeneID:2677873 KEGG:mgr:MGG_04401 Uniprot:G4MKL9
Length = 505
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 52/209 (24%), Positives = 89/209 (42%)
Query: 169 YTIYWQNKIDGKLSETEPLYYLKDWHFTR--DFKT--ED--IYRVPNVFSSDWLNEYYSE 222
++ Y Q +D K + PLY L D F D +D Y P+ F D S+
Sbjct: 238 FSTYHQYMLDTK--DESPLY-LFDKRFAEKMDLTVGRQDGAAYWKPDCFGPDLFELLGSD 294
Query: 223 HLEHKDDYRFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEK---YFKDSM 279
H R++ +GP+ + + H D + +W+ I G K W++ P + Y +
Sbjct: 295 RPAH----RWLIIGPERSGSTFHKDPNATSAWNAVIEGAKYWIMFPPSVQVPGVYVSEDN 350
Query: 280 GNLISDMRSVDWST-LPRDTVIIVEQ-----EAGDSIFVPSGWHHQVTNLEHTISINHNW 333
+ S + +W + +I E AG+ + VPSGW H V NLE I++ N+
Sbjct: 351 SEVTSPLSIAEWLLEFHAEARMIPECVEGVCNAGEVLHVPSGWWHLVVNLEAGIALTQNF 410
Query: 334 INGTNIDHVY---HEMVSHLEAVKKEIDD 359
+ +++ + + K+EI D
Sbjct: 411 VPKSHLSDALSFLRDKPDQVTGFKREIQD 439
>SGD|S000007587 [details] [associations]
symbol:KTI11 "Zn-ribbon protein required for synthesis of
diphthamide on eEF2" species:4932 "Saccharomyces cerevisiae"
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0009055 "electron carrier
activity" evidence=IDA] [GO:0005506 "iron ion binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0002098
"tRNA wobble uridine modification" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0017183 "peptidyl-diphthamide
biosynthetic process from peptidyl-histidine" evidence=IMP]
SGD:S000007587 GO:GO:0005634 GO:GO:0005737 GO:GO:0005506
GO:GO:0009055 GO:GO:0008270 EMBL:BK006936 GO:GO:0002098
InterPro:IPR007872 Pfam:PF05207 PROSITE:PS51074 GO:GO:0017183
KO:K15455 eggNOG:COG5216 GeneTree:ENSGT00390000007225
HOGENOM:HOG000190740 OMA:PCGDRFQ OrthoDB:EOG42VCS2 EMBL:Z35832
RefSeq:NP_660100.1 PDB:1YOP PDB:1YWS PDBsum:1YOP PDBsum:1YWS
ProteinModelPortal:Q3E840 SMR:Q3E840 IntAct:Q3E840
MINT:MINT-2786415 STRING:Q3E840 PaxDb:Q3E840 EnsemblFungi:YBL071W-A
GeneID:852207 KEGG:sce:YBL071W-A CYGD:YBL071w-a
BioCyc:MetaCyc:MONOMER-15580 EvolutionaryTrace:Q3E840
NextBio:970709 Genevestigator:Q3E840 Uniprot:Q3E840
Length = 82
Score = 117 (46.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLII 55
PCPCGDRFQI + + GE VA CP+CSL+I
Sbjct: 24 PCPCGDRFQIYLDDMFEGEKVAVCPSCSLMI 54
>GENEDB_PFALCIPARUM|PFL0860c [details] [associations]
symbol:PFL0860c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE014188 InterPro:IPR007872 Pfam:PF05207 PROSITE:PS51074
HOGENOM:HOG000190740 OMA:PCGDRFQ RefSeq:XP_001350580.1
ProteinModelPortal:Q8I5N0 EnsemblProtists:PFL0860c:mRNA
GeneID:811224 KEGG:pfa:PFL0860c EuPathDB:PlasmoDB:PF3D7_1217800
ProtClustDB:CLSZ2433292 Uniprot:Q8I5N0
Length = 80
Score = 115 (45.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGD F++T E L GE++ CP+CSL IK
Sbjct: 37 PCPCGDIFEVTLEDLFKGENILKCPSCSLTIK 68
>UNIPROTKB|Q8I5N0 [details] [associations]
symbol:PFL0860c "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE014188 InterPro:IPR007872 Pfam:PF05207 PROSITE:PS51074
HOGENOM:HOG000190740 OMA:PCGDRFQ RefSeq:XP_001350580.1
ProteinModelPortal:Q8I5N0 EnsemblProtists:PFL0860c:mRNA
GeneID:811224 KEGG:pfa:PFL0860c EuPathDB:PlasmoDB:PF3D7_1217800
ProtClustDB:CLSZ2433292 Uniprot:Q8I5N0
Length = 80
Score = 115 (45.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 25 PCPCGDRFQITKEQLKAGEDVATCPTCSLIIK 56
PCPCGD F++T E L GE++ CP+CSL IK
Sbjct: 37 PCPCGDIFEVTLEDLFKGENILKCPSCSLTIK 68
>UNIPROTKB|G4MRH8 [details] [associations]
symbol:MGG_02430 "Diphthamide biosynthesis protein 3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] GO:GO:0005634 GO:GO:0005737
GO:GO:0005506 GO:GO:0009055 GO:GO:0008270 EMBL:CM001231
GO:GO:0002098 InterPro:IPR007872 Pfam:PF05207 PROSITE:PS51074
GO:GO:0017183 KO:K15455 RefSeq:XP_003709217.1
ProteinModelPortal:G4MRH8 SMR:G4MRH8 EnsemblFungi:MGG_02430T0
GeneID:2681527 KEGG:mgr:MGG_02430 Uniprot:G4MRH8
Length = 94
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 25 PCPCGDRFQITKEQLKAGE-DVATCPTCSLIIK 56
PCPCGDRF+I L+ E D+A CP+CSL+I+
Sbjct: 30 PCPCGDRFEIALADLQDSETDIAVCPSCSLMIR 62
>UNIPROTKB|Q08D35 [details] [associations]
symbol:jhdm1d "Lysine-specific demethylase 7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005506 "iron ion binding"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=ISS] [GO:0030901 "midbrain development"
evidence=ISS] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISS] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0035574 "histone H4-K20 demethylation"
evidence=ISS] [GO:0035575 "histone demethylase activity (H4-K20
specific)" evidence=ISS] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=ISS] [GO:0070544 "histone H3-K36
demethylation" evidence=ISS] [GO:0071557 "histone H3-K27
demethylation" evidence=ISS] [GO:0071558 "histone demethylase
activity (H3-K27 specific)" evidence=ISS] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0005506 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 GO:GO:0030901 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035064 GO:GO:0051864
eggNOG:NOG290496 GO:GO:0032454 HOGENOM:HOG000231232
HOVERGEN:HBG045631 KO:K11445 GO:GO:0071558 GO:GO:0035575 CTD:80853
EMBL:BC123960 RefSeq:NP_001072664.1 UniGene:Str.52832
ProteinModelPortal:Q08D35 SMR:Q08D35 GeneID:780121 KEGG:xtr:780121
Xenbase:XB-GENE-5900920 Uniprot:Q08D35
Length = 922
Score = 134 (52.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 39/182 (21%), Positives = 80/182 (43%)
Query: 162 TNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSS-DWLNEYY 220
+ M LK + Y+ N K+ L + D K D+ +VP++ W+ Y+
Sbjct: 172 SKMKLKNFVKYFMNPDRPKVLNVISLEF-------SDTKMADLVKVPDISKKLSWVENYW 224
Query: 221 SEHLEHKDDY--RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKY-FKD 277
+ + ++ MG ++++T H D + W + G K + L+ P +E +
Sbjct: 225 PDDSFFTKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKVFYLIKPSDENLALYE 284
Query: 278 SMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGT 337
S + ++ + + +V+Q G ++FVP+GW H V + ++ N+++
Sbjct: 285 SWSSSVTQSEEFFGDKVDKCYKCVVKQ--GHTLFVPTGWIHAVLTSQDCMAFGGNFLHNL 342
Query: 338 NI 339
NI
Sbjct: 343 NI 344
Score = 47 (21.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 28 CGDRFQ---ITKEQLKAGE-DVATCPTCSLIIKPSVIK 61
C D F + E+ +A + D+ CP C ++ PS +K
Sbjct: 27 CKDWFHSSCVKVEEHQAADIDLYHCPNCEVLHGPSQLK 64
>MGI|MGI:2443388 [details] [associations]
symbol:Jhdm1d "jumonji C domain-containing histone
demethylase 1 homolog D (S. cerevisiae)" species:10090 "Mus
musculus" [GO:0005506 "iron ion binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=ISO] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=ISO;IMP]
[GO:0033169 "histone H3-K9 demethylation" evidence=ISO;IMP]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0035574 "histone H4-K20 demethylation" evidence=ISO]
[GO:0035575 "histone demethylase activity (H4-K20 specific)"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] [GO:0071557 "histone H3-K27 demethylation"
evidence=ISO;IMP] [GO:0071558 "histone demethylase activity (H3-K27
specific)" evidence=ISO;IMP] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 MGI:MGI:2443388
GO:GO:0045893 GO:GO:0005730 GO:GO:0005506 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 GO:GO:0030901 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035064
GeneTree:ENSGT00550000074396 GO:GO:0051864 eggNOG:NOG290496
GO:GO:0032454 HOVERGEN:HBG045631 KO:K11445 OrthoDB:EOG46HG90
GO:GO:0071558 GO:GO:0035575 CTD:80853 OMA:QDPSSCH EMBL:AK042327
EMBL:AK042834 EMBL:AK136209 EMBL:AK136238 EMBL:BC007161
EMBL:BC145848 EMBL:AK129429 IPI:IPI00551078 RefSeq:NP_001028602.2
UniGene:Mm.293175 ProteinModelPortal:Q3UWM4 SMR:Q3UWM4
PhosphoSite:Q3UWM4 PRIDE:Q3UWM4 Ensembl:ENSMUST00000002305
GeneID:338523 KEGG:mmu:338523 UCSC:uc009bli.2 InParanoid:A6H6E5
NextBio:400221 Bgee:Q3UWM4 Genevestigator:Q3UWM4
GermOnline:ENSMUSG00000042599 Uniprot:Q3UWM4
Length = 940
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 40/182 (21%), Positives = 79/182 (43%)
Query: 162 TNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSS-DWLNEYY 220
+ MTL Y Y+ N K+ L + D K ++ VP++ W+ Y+
Sbjct: 203 SKMTLHNYVKYFMNPDRPKVLNVISLEF-------SDTKMSELVEVPDIARKLSWVENYW 255
Query: 221 SEHLEHKDDY--RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKY-FKD 277
+ + ++ MG ++++T H D + W + G K + L+ P NE +
Sbjct: 256 PDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTNENLALYE 315
Query: 278 SMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGT 337
S + ++ + + +V+Q G ++FVP+GW H V + ++ N+++
Sbjct: 316 SWSSSVTQSEVFFGDKVDKCYKCVVKQ--GHTLFVPTGWIHAVLTSQDCMAFGGNFLHNL 373
Query: 338 NI 339
NI
Sbjct: 374 NI 375
>DICTYBASE|DDB_G0286391 [details] [associations]
symbol:jcdC "transcription factor jumonji, jmjC
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003347 PROSITE:PS51184 SMART:SM00558
dictyBase:DDB_G0286391 GenomeReviews:CM000153_GR EMBL:AAFI02000085
HSSP:Q9NWT6 eggNOG:NOG71927 RefSeq:XP_637723.2
ProteinModelPortal:Q54LV7 EnsemblProtists:DDB0238367 GeneID:8625588
KEGG:ddi:DDB_G0286391 OMA:PKYYLAS Uniprot:Q54LV7
Length = 415
Score = 104 (41.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 45/152 (29%), Positives = 72/152 (47%)
Query: 233 VYMGPKETWTPLHADVFHSYSWSVN-----ICGRKQWLLLAP-GNEKYFK--DSMGNLIS 284
+++G K+ TPLH D + S ++ I GRKQ+ L P N FK G
Sbjct: 174 LWIGFKDQITPLHHD-WSSGDPGMDGLHAIIIGRKQFKLFDPIVNVNCFKRKKEWGKFHQ 232
Query: 285 ---DMRSVDWSTLPRDT---VIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWIN--G 336
D+ + D++ P +I ++ G+ +F+P W H V LE +ISIN W G
Sbjct: 233 SEFDLDNPDFNKFPEAKNFKIIEIQLNQGEMLFIPKLWWHHVKTLEPSISINF-WFQHIG 291
Query: 337 TNI---DHVYHEMVSHLEAVKKEIDDCKDMDD 365
+ + + ++ M +L AV E+D K +D
Sbjct: 292 SELLKSNKLWCHMEQYLNAVF-EMDATKISND 322
Score = 68 (29.0 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 101 FNNFLSKNKPFILKSCVNEWNS-SLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAH 159
+ ++ KN+PFI+ VN W S + W+ ++ +Y + + +PV +
Sbjct: 14 YEEYILKNQPFIITGVVNNWISFNKKWIPSQNIEDDYFLSILENKGIPVREIG---IDVG 70
Query: 160 EKTNMTLK-EYTIYWQ 174
E T ++I+W+
Sbjct: 71 EWLGKTKNINFSIFWK 86
>DICTYBASE|DDB_G0290765 [details] [associations]
symbol:jcdA "Kame" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003347
PROSITE:PS51184 SMART:SM00558 dictyBase:DDB_G0290765
GenomeReviews:CM000154_GR EMBL:AAFI02000170 RefSeq:XP_635559.1
EnsemblProtists:DDB0238075 GeneID:8627817 KEGG:ddi:DDB_G0290765
eggNOG:KOG2132 OMA:NDSNGER ProtClustDB:CLSZ2429641 Uniprot:Q54FM1
Length = 252
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 68/261 (26%), Positives = 118/261 (45%)
Query: 86 QVDYNIDPSHIYPYCFNNFLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIE 145
QV+ N D ++ F +++ NKP + + ++ S ++ P +YL + GD E
Sbjct: 6 QVERN-DVENLNKELFYSYIKSNKPVVFE----KYRSQA--IEKWTP--DYLLSIIGDRE 56
Query: 146 VPVANCNSYYFNAHEKTNMTLKEY-TIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDI 204
V V C + + + M EY +N+ S E + + + R+F D
Sbjct: 57 VHVNMCT--FGSMSDIVPMKFSEYLNKTLKNEFPINDSNGERIKKINK-PYLRNFGMLDE 113
Query: 205 YRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGP----KETWTPLHADVFHSYSWSVNICG 260
+ P + D N +E + +KD + V MG K++ T H D + SV I G
Sbjct: 114 F--P-ILKEDVKN---NESIFNKDVHNMVVMGSFIGCKDSATNFHKDTGENLV-SV-IHG 165
Query: 261 RKQWLLLAPGNEKYFKDSMGNLI------SDMRS-VD----WSTLPRDTVIIVEQEAGDS 309
+K +L+AP +E K + + I +D S ++ +S + I+ Q G S
Sbjct: 166 KKFIVLIAPSDETNIKSKLSHDIEVQFDSNDFGSPIELHPAFSDCSKIYTTILTQ--GQS 223
Query: 310 IFVPSGWHHQVTNLEHTISIN 330
+F+P GW H V N++ TIS++
Sbjct: 224 LFIPVGWIHYVHNIDTTISVS 244
>UNIPROTKB|E1C7T6 [details] [associations]
symbol:TYW5 "tRNA wybutosine-synthesizing protein 5"
species:9031 "Gallus gallus" [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=ISS] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=ISS] [GO:0005506 "iron ion binding" evidence=ISS]
[GO:0000049 "tRNA binding" evidence=ISS] [GO:0031591 "wybutosine
biosynthetic process" evidence=ISS] InterPro:IPR003347
PROSITE:PS51184 SMART:SM00558 GO:GO:0042803 GO:GO:0005506
GO:GO:0016706 GO:GO:0016702 GO:GO:0000049
GeneTree:ENSGT00530000062914 UniPathway:UPA00375 GO:GO:0031591
EMBL:AADN02019856 IPI:IPI00575802 RefSeq:XP_421921.2
Ensembl:ENSGALT00000013230 GeneID:424065 KEGG:gga:424065 CTD:129450
OMA:NVFWRHL NextBio:20826447 Uniprot:E1C7T6
Length = 318
Score = 116 (45.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 181 LSETEPLYYLKDWHFTRDFKTE--DIYRVPNVFSSD-WLNEYYSEHLEHKDDYRFVYMGP 237
LSE E YYL+ D + + DI + V + D + EY+ + +R G
Sbjct: 102 LSEDEK-YYLRS--VGEDVRKDIADIRKQFPVLAEDVQIPEYFEKEQFFSSVFRISSAG- 157
Query: 238 KETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKY-FKDSMGNLISDMRSVDWSTLPR 296
+ WT H DV ++ + + GRK+ +L +P + Y + + + D+ + D+ P
Sbjct: 158 LQLWT--HYDVMDNFL--IQVTGRKRVVLYSPRDVPYLYLSGTKSEVLDVDNPDFEKYPL 213
Query: 297 DTVIIVEQ---EAGDSIFVPSGWHHQVTNLEHTISINHNW 333
Q EAGD +F+P+ W H V + E +++N W
Sbjct: 214 FAKAKRYQCYLEAGDVLFIPAMWFHNVISEEFGVALNVFW 253
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 57 PSVIKSVMLMLSDSCNSNEQINVTTTALPQVDYNIDPSHIY 97
P K + LS + S E + + +A+PQ+D+ + + +Y
Sbjct: 42 PCTTKWTVDYLSQAAGSKE-VKIHVSAVPQMDF-LSKNFVY 80
>ASPGD|ASPL0000070501 [details] [associations]
symbol:AN10542 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003347 PROSITE:PS51184 EMBL:BN001303
EnsemblFungi:CADANIAT00006135 OMA:GEEMMQG Uniprot:C8V964
Length = 320
Score = 83 (34.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 303 EQEAGDSIFVPSGWHHQVTNLEHTISINHNW 333
E +AGD +F+P GW H + + +++ + NW
Sbjct: 287 ELDAGDGLFIPKGWWHSIKGMGESVTASVNW 317
Score = 79 (32.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 38/161 (23%), Positives = 64/161 (39%)
Query: 125 HWVQNKQPNFEYLSNHYGDIEVPVANCNSYY-FNAHEKTNMTLKEYTIYWQNKIDGKLSE 183
H Q N EYL++H GD VP+ S + E ++ +++ + + E
Sbjct: 85 HTATKPQLNIEYLADHGGDALVPLELTQSERSISISEDPGLSFRKFHAPLSLFLQW-IRE 143
Query: 184 TEPLYYLKDWHFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLEHKDDYRF-VYMGPKETWT 242
+ L+ + + D+ P + D+ D Y ++MG T+T
Sbjct: 144 AQSSSQLQSRLYLAQCQLLDL---PQILRDDFPTPTIVAKAGKGDVYDTNIWMGYPPTYT 200
Query: 243 PLHADVFHSYSWSVNICGRKQWLLLAPGN-EKYFKDSMGNL 282
PLH D + + V + GRK LL P + + F G L
Sbjct: 201 PLHRDP--NPNLFVQLAGRKTVRLLGPRDGQAVFSHVRGKL 239
>UNIPROTKB|F1SRP4 [details] [associations]
symbol:JHDM1D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071558 "histone demethylase activity (H3-K27
specific)" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035575 "histone
demethylase activity (H4-K20 specific)" evidence=IEA] [GO:0035064
"methylated histone residue binding" evidence=IEA] [GO:0032454
"histone demethylase activity (H3-K9 specific)" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0045893
GO:GO:0005730 GO:GO:0005506 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00550000074396
GO:GO:0051864 GO:GO:0032454 GO:GO:0071558 GO:GO:0035575 OMA:QDPSSCH
EMBL:CU928390 Ensembl:ENSSSCT00000017965 Uniprot:F1SRP4
Length = 946
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 38/182 (20%), Positives = 79/182 (43%)
Query: 162 TNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSS-DWLNEYY 220
+ MTL Y Y+ N K+ L + D K ++ VP++ W+ Y+
Sbjct: 207 SKMTLHNYVKYFMNPNRPKVLNVISLEF-------SDTKMSELVEVPDIARKLSWVENYW 259
Query: 221 SEHLEHKDDY--RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKY-FKD 277
+ + ++ MG ++++T H D + W + G K + L+ P ++ +
Sbjct: 260 PDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDDNLALYE 319
Query: 278 SMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGT 337
S + ++ + + +V+Q G ++FVP+GW H V + ++ N+++
Sbjct: 320 SWSSSVTQSEVFFGDKVDKCYKCVVKQ--GHTLFVPTGWIHAVLTSQDCMAFGGNFLHNL 377
Query: 338 NI 339
NI
Sbjct: 378 NI 379
>DICTYBASE|DDB_G0270906 [details] [associations]
symbol:jcdD "transcription factor jumonji, jmjC
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003347 PROSITE:PS51184 SMART:SM00558
dictyBase:DDB_G0270906 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
HSSP:Q9NWT6 eggNOG:NOG71927 RefSeq:XP_646176.1
ProteinModelPortal:Q55DF5 EnsemblProtists:DDB0238370 GeneID:8617129
KEGG:ddi:DDB_G0270906 ProtClustDB:CLSZ2429630 Uniprot:Q55DF5
Length = 448
Score = 119 (46.9 bits), Expect = 0.00042, P = 0.00042
Identities = 60/250 (24%), Positives = 107/250 (42%)
Query: 102 NNFLSKNKPFILKSCVNEWNSSLHWVQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEK 161
N ++ K P ++++ + EW + + + YL N G VP+ +Y HEK
Sbjct: 214 NEYMIKGNPCVIENLMKEWPC---FNERNWSDLNYLKNVAGSRLVPIEIGPNYL---HEK 267
Query: 162 TNMTLKEYTIYWQNKIDGKLSE--TEPLYYLKDWHFTRDFKTEDIYRVPNVFSSDWLNEY 219
L + + I K S+ + + YL T+ F+ ++P + + + EY
Sbjct: 268 MKQKLINFNKFIDEYIISKNSDDDNDDIGYLAQ---TKLFE-----QIPQLRNDILIPEY 319
Query: 220 YS--------EHLEHKDDYRFV--YMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAP 269
++ +K+D + ++GPK T TPLH D H++ I GRK L +P
Sbjct: 320 CKIKIGCGDDDNDNNKEDNVEINAWLGPKGTVTPLHYDPKHNFL--CQIVGRKYIKLFSP 377
Query: 270 --GNEKY----FKDSMGNLISDMRSVDWSTLPR----DTVIIVEQEAGDSIFVPSGWHHQ 319
N Y K + D+ + D S P D + ++ AG+ +++P + H
Sbjct: 378 KESNNLYPHLNSKLFFNTSMVDVENPDHSKFPLFKNCDYIELI-LNAGEILYIPPTYWHF 436
Query: 320 VTNLEHTISI 329
V +L + SI
Sbjct: 437 VKSLSQSFSI 446
>UNIPROTKB|Q6ZMT4 [details] [associations]
symbol:JHDM1D "Lysine-specific demethylase 7" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IDA] [GO:0035064 "methylated histone residue binding"
evidence=IDA] [GO:0033169 "histone H3-K9 demethylation"
evidence=IDA] [GO:0071558 "histone demethylase activity (H3-K27
specific)" evidence=IDA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA;TAS] [GO:0071557 "histone H3-K27
demethylation" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0030901
"midbrain development" evidence=ISS] [GO:0051864 "histone
demethylase activity (H3-K36 specific)" evidence=IDA] [GO:0070544
"histone H3-K36 demethylation" evidence=IDA] [GO:0035574 "histone
H4-K20 demethylation" evidence=IDA] [GO:0035575 "histone
demethylase activity (H4-K20 specific)" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0045893
GO:GO:0005730 GO:GO:0005506 GO:GO:0008270 GO:GO:0006351
GO:GO:0016702 GO:GO:0030901 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:CH236950 GO:GO:0035064 GO:GO:0051864
eggNOG:NOG290496 GO:GO:0032454 HOGENOM:HOG000231232
HOVERGEN:HBG045631 KO:K11445 OrthoDB:EOG46HG90 GO:GO:0071558
GO:GO:0035575 EMBL:AK131497 EMBL:AC004849 EMBL:AB051505
EMBL:BX641017 IPI:IPI00418567 IPI:IPI00738581 RefSeq:NP_085150.1
UniGene:Hs.308710 PDB:3KV5 PDB:3KV6 PDB:3KV9 PDB:3KVA PDB:3KVB
PDB:3U78 PDBsum:3KV5 PDBsum:3KV6 PDBsum:3KV9 PDBsum:3KVA
PDBsum:3KVB PDBsum:3U78 ProteinModelPortal:Q6ZMT4 SMR:Q6ZMT4
IntAct:Q6ZMT4 STRING:Q6ZMT4 PhosphoSite:Q6ZMT4 DMDM:90111764
PaxDb:Q6ZMT4 PRIDE:Q6ZMT4 Ensembl:ENST00000006967
Ensembl:ENST00000397560 GeneID:80853 KEGG:hsa:80853 UCSC:uc003vvm.3
CTD:80853 GeneCards:GC07M139784 H-InvDB:HIX0007139 HGNC:HGNC:22224
HPA:HPA012114 neXtProt:NX_Q6ZMT4 PharmGKB:PA162392512
InParanoid:Q6ZMT4 OMA:QDPSSCH PhylomeDB:Q6ZMT4
EvolutionaryTrace:Q6ZMT4 GenomeRNAi:80853 NextBio:71296
ArrayExpress:Q6ZMT4 Bgee:Q6ZMT4 CleanEx:HS_JHDM1D
Genevestigator:Q6ZMT4 GermOnline:ENSG00000006459 Uniprot:Q6ZMT4
Length = 941
Score = 131 (51.2 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 39/182 (21%), Positives = 80/182 (43%)
Query: 162 TNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSS-DWLNEYY 220
+ MTL Y Y+ N K+ L + D K ++ VP++ W+ Y+
Sbjct: 203 SKMTLHNYVKYFMNPNRPKVLNVISLEF-------SDTKMSELVEVPDIAKKLSWVENYW 255
Query: 221 SEHLEHKDDY--RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKYFK-D 277
+ + ++ MG ++++T H D + W + G K + L+ P +E + +
Sbjct: 256 PDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYE 315
Query: 278 SMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGT 337
S + ++ + + +V+Q G ++FVP+GW H V + ++ N+++
Sbjct: 316 SWSSSVTQSEVFFGDKVDKCYKCVVKQ--GHTLFVPTGWIHAVLTSQDCMAFGGNFLHNL 373
Query: 338 NI 339
NI
Sbjct: 374 NI 375
Score = 37 (18.1 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 44 DVATCPTCSLIIKPSVIK 61
D+ CP C+++ S++K
Sbjct: 78 DLYHCPNCAVLHGSSLMK 95
>TAIR|locus:2091861 [details] [associations]
symbol:JMJD5 "AT3G20810" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 PROSITE:PS51184 SMART:SM00558 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007623 GO:GO:0042752 HSSP:Q9NWT6
OMA:VYSYGCL HOGENOM:HOG000264453 EMBL:AY091769 EMBL:AY125538
IPI:IPI00519943 RefSeq:NP_850617.1 UniGene:At.38175
ProteinModelPortal:Q8RWR1 SMR:Q8RWR1 IntAct:Q8RWR1 STRING:Q8RWR1
PRIDE:Q8RWR1 EnsemblPlants:AT3G20810.2 GeneID:821629
KEGG:ath:AT3G20810 TAIR:At3g20810 InParanoid:Q8RWR1
PhylomeDB:Q8RWR1 ProtClustDB:CLSN2688605 Genevestigator:Q8RWR1
Uniprot:Q8RWR1
Length = 429
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 53/225 (23%), Positives = 99/225 (44%)
Query: 121 NSSLHW-VQNKQPNFEYLSNHYGDIEVPVANCNSYYFNAHEKTNMTLKEYTIYWQNKIDG 179
NS HW + K + +YL+ G+ VPV +Y + ++ +T ++ +
Sbjct: 214 NSMAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCSDWKQELVTFSKFL---ERMRTN 270
Query: 180 KLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSSDWLNEYYSEHLEHKDDYRFVYMGPKE 239
K S EP Y + F + + D +P D+ E L+ + + GP
Sbjct: 271 KSSPMEPTYLAQHPLFDQINELRDDICIP-----DYCFVGGGE-LQSLN----AWFGPAG 320
Query: 240 TWTPLHADVFHSYSWSVNICGRKQWLLLAPG---NEKY-FKDSM--GNLISDMRSVDWST 293
T TPLH D H+ + G+K ++ L P +E Y + ++M + D+ ++D +
Sbjct: 321 TVTPLHHDPHHNIL--AQVVGKK-YIRLYPSFLQDELYPYSETMLCNSSQVDLDNIDETE 377
Query: 294 LPRDTVIIVEQ---EAGDSIFVPSGWHHQVTNLEHTISINHNWIN 335
P+ + E G+ +++P W H V +L ++S++ W N
Sbjct: 378 FPKAMELEFMDCILEEGEMLYIPPKWWHYVRSLTMSLSVSFWWSN 422
>UNIPROTKB|F1P290 [details] [associations]
symbol:JHDM1D "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0035575 "histone demethylase
activity (H4-K20 specific)" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] [GO:0071558 "histone demethylase activity (H3-K27
specific)" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0045893 GO:GO:0005730
GO:GO:0005506 GO:GO:0008270 GeneTree:ENSGT00550000074396
GO:GO:0051864 GO:GO:0032454 GO:GO:0071558 GO:GO:0035575 OMA:QDPSSCH
EMBL:AADN02006358 IPI:IPI00600574 Ensembl:ENSGALT00000020953
Uniprot:F1P290
Length = 883
Score = 121 (47.7 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 31/146 (21%), Positives = 67/146 (45%)
Query: 198 DFKTEDIYRVPNVFSS-DWLNEYYSEHLEHKDDY--RFVYMGPKETWTPLHADVFHSYSW 254
D K ++ VP++ W+ Y+ + + ++ MG ++++T H D + W
Sbjct: 171 DTKMSELVEVPDIARKLSWVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVW 230
Query: 255 SVNICGRKQWLLLAPGNEKY-FKDSMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVP 313
+ G K + L+ P +E +S + ++ + + +V+Q G ++FVP
Sbjct: 231 YHVLWGEKIFYLIKPTDENLALYESWSSSVTQSEVYFGDKVDKCYKCVVKQ--GHTLFVP 288
Query: 314 SGWHHQVTNLEHTISINHNWINGTNI 339
+GW H V + ++ N+++ NI
Sbjct: 289 TGWIHAVLTSQDCMAFGGNFLHNLNI 314
Score = 45 (20.9 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 44 DVATCPTCSLIIKPSVIK 61
D+ CP C+++ PS++K
Sbjct: 17 DLYHCPNCAVLHGPSLMK 34
>UNIPROTKB|F1N542 [details] [associations]
symbol:JHDM1D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071558 "histone demethylase activity (H3-K27
specific)" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035575 "histone
demethylase activity (H4-K20 specific)" evidence=IEA] [GO:0035064
"methylated histone residue binding" evidence=IEA] [GO:0032454
"histone demethylase activity (H3-K9 specific)" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0045893 GO:GO:0005730 GO:GO:0005506
GO:GO:0008270 GeneTree:ENSGT00550000074396 GO:GO:0051864
GO:GO:0032454 GO:GO:0071558 GO:GO:0035575 OMA:QDPSSCH
EMBL:DAAA02011729 IPI:IPI00702911 Ensembl:ENSBTAT00000033494
Uniprot:F1N542
Length = 878
Score = 125 (49.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 38/182 (20%), Positives = 79/182 (43%)
Query: 162 TNMTLKEYTIYWQNKIDGKLSETEPLYYLKDWHFTRDFKTEDIYRVPNVFSS-DWLNEYY 220
+ MTL Y Y+ N K+ L + D K ++ VP++ W+ Y+
Sbjct: 139 SKMTLHNYVKYFTNPNRPKVLNVISLEF-------SDTKMSELVEVPDIARKLSWVENYW 191
Query: 221 SEHLEHKDDY--RFVYMGPKETWTPLHADVFHSYSWSVNICGRKQWLLLAPGNEKY-FKD 277
+ + ++ MG ++++T H D + W + G K + L+ P ++ +
Sbjct: 192 PDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKVFYLIKPTDDNLALYE 251
Query: 278 SMGNLISDMRSVDWSTLPRDTVIIVEQEAGDSIFVPSGWHHQVTNLEHTISINHNWINGT 337
S + ++ + + +V+Q G ++FVP+GW H V + ++ N+++
Sbjct: 252 SWSSSVTQSEVFFGDKVDKCYKCVVKQ--GHTLFVPTGWIHAVLTSQDCMAFGGNFLHNL 309
Query: 338 NI 339
NI
Sbjct: 310 NI 311
Score = 40 (19.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 44 DVATCPTCSLIIKPSVIK 61
D+ CP C+L+ S++K
Sbjct: 14 DLYHCPNCALLHGSSLMK 31
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 456 435 0.00087 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 630 (67 KB)
Total size of DFA: 360 KB (2176 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.86u 0.13s 38.99t Elapsed: 00:00:03
Total cpu time: 38.87u 0.13s 39.00t Elapsed: 00:00:03
Start: Thu Aug 15 16:44:44 2013 End: Thu Aug 15 16:44:47 2013