BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12283
(788 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9EQH3|VPS35_MOUSE Vacuolar protein sorting-associated protein 35 OS=Mus musculus
GN=Vps35 PE=1 SV=1
Length = 796
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/790 (66%), Positives = 655/790 (82%), Gaps = 7/790 (0%)
Query: 6 SPSEEQDRLLEEASHIVKTQSLQMKRCLDSDKLMDALKHASTMLSELRTSLLSPKNYYEL 65
SP +EQ++LL+EA VK QS QMKRCLD +KLMDALKHAS ML ELRTS+LSPK+YYEL
Sbjct: 7 SPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYEL 66
Query: 66 YMAVTDELRQLELYLVDEFQRGRKVPDLYELVQYAGNIVPRLYLLITVALVYIKTNSSLK 125
YMA++DEL LE+YL DEF +GRKV DLYELVQYAGNI+PRLYLLITV +VY+K+ +
Sbjct: 67 YMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSR 126
Query: 126 RDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTPEDEGDQAEGTVRDSVDFILMN 185
+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E ++ G + DS+DF+L+N
Sbjct: 127 KDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDFVLLN 186
Query: 186 FAEMNKLWVRMQHQGHSRDKERREREREELRILVGTNLVRLSELDSITRDKYKKLVLPGI 245
FAEMNKLWVRMQHQGHSRD+E+RERER+ELRILVGTNLVRLS+L+ + ++YK++VL GI
Sbjct: 187 FAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLTGI 246
Query: 246 LEQVVSCRDAIAQEYLMECIIQVFPDEFHLATLTAFLKSCAELQAGVNVKNILIALIDRL 305
LEQVV+CRDA+AQEYLMECIIQVFPDEFHL TL FL++CAEL VNVKNI+IALIDRL
Sbjct: 247 LEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRL 306
Query: 306 SLYAQKNKEFN-----SLFETFSEQVASIVQSRIDMPAEDIVALQVSLINLALKCYPDKV 360
+L+A + LF+ FS+QVA+++QSR DMP+ED+V+LQVSLINLA+KCYPD+V
Sbjct: 307 ALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRV 366
Query: 361 DYIDKILQTTVETFQKLNIERVEYNTPVSRELMRLLKIFIDQYNNILTVIQLTYFAPLME 420
DY+DK+L+TTVE F KLN+E + ++ VS+EL RLLKI +D YNNILTV++L +F PL E
Sbjct: 367 DYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFE 426
Query: 421 LFDFYGRKSVSAYLITNALNNDTLVPTSESVDSILTIVSSLVQDQDDQPAEEEDPEDFAE 480
FD+ RKS+S Y+++N L+ +T + + + VDSI+ +VS+L+QDQ DQP E+ DPEDFA+
Sbjct: 427 YFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPDPEDFAD 486
Query: 481 EQGLLGRLVHQFKSDVPDQQYLILSTARKHFQAGGKKRIKHTLPPLVFQAYQLATQFSAL 540
EQ L+GR +H +SD PDQQYLIL+TARKHF AGG +RI+ TLPPLVF AYQLA ++
Sbjct: 487 EQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKEN 546
Query: 541 REEDEMWSKKCSKIFRFCHQIILSLIKAELAELPLRLFLQGAMTIGSIDFENHETISYEF 600
+ D+ W KKC KIF F HQ I +LIKAELAELPLRLFLQGA+ G I FENHET++YEF
Sbjct: 547 SQMDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEF 606
Query: 601 ISQALSLYEEEISESKCQLAAITLLVGTFEKMSCFGEENAEPIRTQSALAASKLFKKPDQ 660
+SQA SLYE+EIS+SK QLAAITL++GTFE+M CF EEN EP+RTQ ALAASKL KKPDQ
Sbjct: 607 MSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQ 666
Query: 661 CSGVCTCSHLFWSGKNS--QGEEIRDGKRVLECLKKGVRIASQCMDMSVQVQLFIELLNH 718
V TC+HLFWSG+N+ GEE+ GKRV+ECLKK ++IA+QCMD S+QVQLFIE+LN
Sbjct: 667 GRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNR 726
Query: 719 YIYYFEKKNEHITVAMLNQLIGKIRDELANLESNEETEQISKHFTNTLFHLRNRQEGPPV 778
YIY++EK+N+ +T+ +LNQLI KIR++L NLES+EETEQI+KHF NTL HLR+R+E P
Sbjct: 727 YIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRSRRESPES 786
Query: 779 DGISYEGLTL 788
+G YEGL L
Sbjct: 787 EGPIYEGLIL 796
>sp|Q2HJG5|VPS35_BOVIN Vacuolar protein sorting-associated protein 35 OS=Bos taurus
GN=VPS35 PE=2 SV=1
Length = 796
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/790 (66%), Positives = 654/790 (82%), Gaps = 7/790 (0%)
Query: 6 SPSEEQDRLLEEASHIVKTQSLQMKRCLDSDKLMDALKHASTMLSELRTSLLSPKNYYEL 65
SP +EQ++LL+EA VK QS QMKRCLD +KLMDALKHAS ML ELRTS+LSPK+YYEL
Sbjct: 7 SPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYEL 66
Query: 66 YMAVTDELRQLELYLVDEFQRGRKVPDLYELVQYAGNIVPRLYLLITVALVYIKTNSSLK 125
YMA++DEL LE+YL DEF +GRKV DLYELVQYAGNI+PRLYLLITV +VY+K+ +
Sbjct: 67 YMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSR 126
Query: 126 RDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTPEDEGDQAEGTVRDSVDFILMN 185
+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E ++ G + DS+DF+L+N
Sbjct: 127 KDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDFVLLN 186
Query: 186 FAEMNKLWVRMQHQGHSRDKERREREREELRILVGTNLVRLSELDSITRDKYKKLVLPGI 245
FAEMNKLWVRMQHQGHSRD+E+RERER+ELRILVGTNLVRLS+L+ + ++YK++VL GI
Sbjct: 187 FAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLTGI 246
Query: 246 LEQVVSCRDAIAQEYLMECIIQVFPDEFHLATLTAFLKSCAELQAGVNVKNILIALIDRL 305
LEQVV+CRDA+AQEYLMECIIQVFPDEFHL TL FL++CAEL VNVKNI+IALIDRL
Sbjct: 247 LEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRL 306
Query: 306 SLYAQKNKEFN-----SLFETFSEQVASIVQSRIDMPAEDIVALQVSLINLALKCYPDKV 360
+L+A + LF+ FS+QVA+++QSR DMP+ED+V+LQVSLINLA+KCYPD+V
Sbjct: 307 ALFAHREDGPGIPTDIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRV 366
Query: 361 DYIDKILQTTVETFQKLNIERVEYNTPVSRELMRLLKIFIDQYNNILTVIQLTYFAPLME 420
DY+DK+L+TTVE F KLN+E + ++ VS+EL RLLKI +D YNNILTV++L +F PL E
Sbjct: 367 DYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFE 426
Query: 421 LFDFYGRKSVSAYLITNALNNDTLVPTSESVDSILTIVSSLVQDQDDQPAEEEDPEDFAE 480
FD+ RKS+S Y+++N L+ +T + + + VDSI+ +VS+L+QDQ DQP EE DPEDFA+
Sbjct: 427 YFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEEPDPEDFAD 486
Query: 481 EQGLLGRLVHQFKSDVPDQQYLILSTARKHFQAGGKKRIKHTLPPLVFQAYQLATQFSAL 540
EQ L+GR +H +S+ PDQQYLIL+TARKHF AGG +RI+ TLPPLVF AYQLA ++
Sbjct: 487 EQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKEN 546
Query: 541 REEDEMWSKKCSKIFRFCHQIILSLIKAELAELPLRLFLQGAMTIGSIDFENHETISYEF 600
+ D+ W KKC KIF F HQ I +LIKAELAELPLRLFLQGA+ G I FENHET++YEF
Sbjct: 547 SKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEF 606
Query: 601 ISQALSLYEEEISESKCQLAAITLLVGTFEKMSCFGEENAEPIRTQSALAASKLFKKPDQ 660
+SQA SLYE+EIS+SK QLAAITL++GTFE+M CF EEN EP+RTQ ALAASKL KKPDQ
Sbjct: 607 MSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQ 666
Query: 661 CSGVCTCSHLFWSGKNS--QGEEIRDGKRVLECLKKGVRIASQCMDMSVQVQLFIELLNH 718
V TC+HLFWSG+N+ GEE+ GKRV+ECLKK ++IA+QCMD S+QVQLFIE+LN
Sbjct: 667 GRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNR 726
Query: 719 YIYYFEKKNEHITVAMLNQLIGKIRDELANLESNEETEQISKHFTNTLFHLRNRQEGPPV 778
YIY++EK+N+ +T+ +LNQLI KIR++L NLES+EETEQI+KHF NTL HLR R+E P
Sbjct: 727 YIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPES 786
Query: 779 DGISYEGLTL 788
+G YEGL L
Sbjct: 787 EGPIYEGLIL 796
>sp|Q96QK1|VPS35_HUMAN Vacuolar protein sorting-associated protein 35 OS=Homo sapiens
GN=VPS35 PE=1 SV=2
Length = 796
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/790 (66%), Positives = 654/790 (82%), Gaps = 7/790 (0%)
Query: 6 SPSEEQDRLLEEASHIVKTQSLQMKRCLDSDKLMDALKHASTMLSELRTSLLSPKNYYEL 65
SP +EQ++LL+EA VK QS QMKRCLD +KLMDALKHAS ML ELRTS+LSPK+YYEL
Sbjct: 7 SPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYEL 66
Query: 66 YMAVTDELRQLELYLVDEFQRGRKVPDLYELVQYAGNIVPRLYLLITVALVYIKTNSSLK 125
YMA++DEL LE+YL DEF +GRKV DLYELVQYAGNI+PRLYLLITV +VY+K+ +
Sbjct: 67 YMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSR 126
Query: 126 RDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTPEDEGDQAEGTVRDSVDFILMN 185
+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E ++ G + DS+DF+L+N
Sbjct: 127 KDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDFVLLN 186
Query: 186 FAEMNKLWVRMQHQGHSRDKERREREREELRILVGTNLVRLSELDSITRDKYKKLVLPGI 245
FAEMNKLWVRMQHQGHSRD+E+RERER+ELRILVGTNLVRLS+L+ + ++YK++VL GI
Sbjct: 187 FAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLTGI 246
Query: 246 LEQVVSCRDAIAQEYLMECIIQVFPDEFHLATLTAFLKSCAELQAGVNVKNILIALIDRL 305
LEQVV+CRDA+AQEYLMECIIQVFPDEFHL TL FL++CAEL VNVKNI+IALIDRL
Sbjct: 247 LEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRL 306
Query: 306 SLYAQKNKEFN-----SLFETFSEQVASIVQSRIDMPAEDIVALQVSLINLALKCYPDKV 360
+L+A + LF+ FS+QVA+++QSR DMP+ED+V+LQVSLINLA+KCYPD+V
Sbjct: 307 ALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRV 366
Query: 361 DYIDKILQTTVETFQKLNIERVEYNTPVSRELMRLLKIFIDQYNNILTVIQLTYFAPLME 420
DY+DK+L+TTVE F KLN+E + ++ VS+EL RLLKI +D YNNILTV++L +F PL E
Sbjct: 367 DYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFE 426
Query: 421 LFDFYGRKSVSAYLITNALNNDTLVPTSESVDSILTIVSSLVQDQDDQPAEEEDPEDFAE 480
FD+ RKS+S Y+++N L+ +T + + + VDSI+ +VS+L+QDQ DQP E+ DPEDFA+
Sbjct: 427 YFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPDPEDFAD 486
Query: 481 EQGLLGRLVHQFKSDVPDQQYLILSTARKHFQAGGKKRIKHTLPPLVFQAYQLATQFSAL 540
EQ L+GR +H +S+ PDQQYLIL+TARKHF AGG +RI+ TLPPLVF AYQLA ++
Sbjct: 487 EQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKEN 546
Query: 541 REEDEMWSKKCSKIFRFCHQIILSLIKAELAELPLRLFLQGAMTIGSIDFENHETISYEF 600
+ D+ W KKC KIF F HQ I +LIKAELAELPLRLFLQGA+ G I FENHET++YEF
Sbjct: 547 SKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEF 606
Query: 601 ISQALSLYEEEISESKCQLAAITLLVGTFEKMSCFGEENAEPIRTQSALAASKLFKKPDQ 660
+SQA SLYE+EIS+SK QLAAITL++GTFE+M CF EEN EP+RTQ ALAASKL KKPDQ
Sbjct: 607 MSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQ 666
Query: 661 CSGVCTCSHLFWSGKNS--QGEEIRDGKRVLECLKKGVRIASQCMDMSVQVQLFIELLNH 718
V TC+HLFWSG+N+ GEE+ GKRV+ECLKK ++IA+QCMD S+QVQLFIE+LN
Sbjct: 667 GRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNR 726
Query: 719 YIYYFEKKNEHITVAMLNQLIGKIRDELANLESNEETEQISKHFTNTLFHLRNRQEGPPV 778
YIY++EK+N+ +T+ +LNQLI KIR++L NLES+EETEQI+KHF NTL HLR R+E P
Sbjct: 727 YIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPES 786
Query: 779 DGISYEGLTL 788
+G YEGL L
Sbjct: 787 EGPIYEGLIL 796
>sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B OS=Arabidopsis
thaliana GN=VPS35B PE=1 SV=1
Length = 790
Score = 608 bits (1568), Expect = e-173, Method: Compositional matrix adjust.
Identities = 331/798 (41%), Positives = 497/798 (62%), Gaps = 33/798 (4%)
Query: 9 EEQDRLLEEASHIVKTQSLQMKRCLDSDKLMDALKHASTMLSELRTSLLSPKNYYELYMA 68
E++D+ L E ++ + M R LD++ L + LK+++ MLSELRTS LSP+ YY+LYM
Sbjct: 8 EDEDKWLAEGIAGIQHNAFFMHRALDANNLREVLKYSALMLSELRTSKLSPQKYYDLYMR 67
Query: 69 VTDELRQLELYLVDEFQRGRKVPDLYELVQYAGNIVPRLYLLITVALVYIKTNSSLKRDL 128
D+LRQLE++ DE + G V DLYELVQ+AGNI+PR+YLL TV VYIK+ + +D+
Sbjct: 68 AFDQLRQLEIFFKDESRHGLPVVDLYELVQHAGNILPRMYLLCTVGSVYIKSKQAPSKDV 127
Query: 129 LKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTPED-EGDQAEGTVRDSVDFILMNFA 187
LKDLVEMCRGVQHP+RGLFLR+YL Q +R+ LP+ D EGD TV D+V+F+L NF
Sbjct: 128 LKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPEIGSDYEGDA--NTVMDAVEFVLQNFT 185
Query: 188 EMNKLWVRMQHQGHSRDKERREREREELRILVGTNLVRLSELDSITRDKYKKLVLPGILE 247
EMNKLWVR+QHQG +E++E+ER ELR LVG NL L +++ + + YK+ VLP +LE
Sbjct: 186 EMNKLWVRIQHQGPGTVREKQEKERNELRDLVGKNLHVLGQIEGVDLEMYKETVLPRVLE 245
Query: 248 QVVSCRDAIAQEYLMECIIQVFPDEFHLATLTAFLKSCAELQAGVNVKNILIALIDRLSL 307
QVV+C+D +AQ YLMECIIQVFPDE+HL TL L +C +L V+ K +L L+DRLS
Sbjct: 246 QVVNCKDKLAQYYLMECIIQVFPDEYHLQTLETLLAACTQLMPTVDTKIVLTQLMDRLSN 305
Query: 308 YAQKN----KEFNSL--FETFSEQVASIVQSRIDMPAEDIVALQVSLINLALKCYPDKVD 361
YA + EF + F S + ++ ++++MP + L VSL+ L+ +PD++D
Sbjct: 306 YAASSPDVLHEFLQVEAFAKLSNAIGKVIDTQLEMPIVGAMTLFVSLLTFTLRVHPDRLD 365
Query: 362 YIDKILQTTVETFQKLNIERVEYNTPVSRELMRLLKIFIDQYNNILTVIQLTYFAPLMEL 421
Y+D++L V ++ ++E + ++++ LL +++Y++I+T + L+ + +M+
Sbjct: 366 YVDQVLGACVVKLS--SVPKLE-DARAMKQVVALLSAPLEKYSDIVTALTLSNYPRVMDH 422
Query: 422 FDFYGRKSVSAYLITNALNNDTLVPTSESVDSILTIVSSLVQDQDDQPAEEEDPEDFAEE 481
D K ++ +I + + D+ + T++ V+ + ++ L++D D+ AEE D EDF EE
Sbjct: 423 LDDGTNKVMAMLIIQSIMKTDSCISTADKVEVLFELIKGLIKDLDETNAEELDEEDFQEE 482
Query: 482 QGLLGRLVHQFKSDVPDQQYLILSTARKHFQAGGKKRIKHTLPPLVFQAY----QLATQF 537
Q + RL+H ++ P++ I+ R+H GG +R+ T+PPLVF A QL +Q
Sbjct: 483 QNSVARLIHMLDNEEPEEMLKIICVVRRHLMTGGPRRLPFTVPPLVFSAVRLVRQLESQG 542
Query: 538 SALREEDEMWSKKCSKIFRFCHQIILSLIKAELAELPLRLFLQGAMTIGSIDFENHETIS 597
+ ED S KIF+ +Q I L EL LRL+LQ A D E ++
Sbjct: 543 GDIAGED---SATPRKIFQILNQTIEVLTSVPCPELALRLYLQCAEAASDCDL---EPVA 596
Query: 598 YEFISQALSLYEEEISESKCQLAAITLLVGTFEKMSCFGEENAEPIRTQSALAASKLFKK 657
YEF +QA LYEEEI++SK Q+ AI L+VGT ++++ FG EN + + ++ +++L KK
Sbjct: 597 YEFFTQAFMLYEEEIADSKAQVTAIHLIVGTLQRINVFGVENRDTLTHKATGYSARLLKK 656
Query: 658 PDQCSGVCTCSHLFWSGKNSQGEEIRDGKRVLECLKKGVRIASQCMDM-------SVQVQ 710
PDQC V CSHLFW + I+DG+RVL CL++ +RIA+ M S V
Sbjct: 657 PDQCRAVYACSHLFWV---DDPDGIKDGERVLLCLRRALRIANAAQQMASATRGSSGPVT 713
Query: 711 LFIELLNHYIYYFEKKNEHITVAMLNQLIGKIRDELANLESNEETEQISKHFTNTLFHLR 770
LF+E+LN YIY+FEK N HIT + + LI I +E+ + N T FT+TL +++
Sbjct: 714 LFVEILNKYIYFFEKGNPHITPSDIQSLIELINNEMQSDNGN-TTIHSDPFFTSTLRYIK 772
Query: 771 NRQEGPPVDGISYEGLTL 788
++ + G Y+ + L
Sbjct: 773 FIKQKGGLMGEKYDPIKL 790
>sp|Q7X659|VP35A_ARATH Vacuolar protein sorting-associated protein 35A OS=Arabidopsis
thaliana GN=VPS35A PE=2 SV=1
Length = 787
Score = 599 bits (1545), Expect = e-170, Method: Compositional matrix adjust.
Identities = 342/798 (42%), Positives = 502/798 (62%), Gaps = 37/798 (4%)
Query: 8 SEEQDRLLEEASHIVKTQSLQMKRCLDSDKLMDALKHASTMLSELRTSLLSPKNYYELYM 67
SE++++ L + K + M+R +DS+ L DALK+++ MLSELRTS LSP YY+LYM
Sbjct: 6 SEDEEKWLAAGAAAFKQNAFYMQRAIDSNNLKDALKYSAQMLSELRTSKLSPHKYYDLYM 65
Query: 68 AVTDELRQLELYLVDEFQRGRKVPDLYELVQYAGNIVPRLYLLITVALVYIKTNSSLKRD 127
DELR+LE++ ++E +RG V +LYELVQ+AGNI+PRLYLL T VYIKT + ++
Sbjct: 66 RAFDELRKLEIFFMEETRRGCSVIELYELVQHAGNILPRLYLLCTAGSVYIKTKEAPAKE 125
Query: 128 LLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDT-PEDEGDQAEGTVRDSVDFILMNF 186
+LKDLVEMCRG+QHPLRGLFLR+YL Q +R+ LPD E EGD TV D+V+F+L+NF
Sbjct: 126 ILKDLVEMCRGIQHPLRGLFLRSYLAQISRDKLPDIGSEYEGDA--DTVIDAVEFVLLNF 183
Query: 187 AEMNKLWVRMQHQGHSRDKERREREREELRILVGTNLVRLSELDSITRDKYKKLVLPGIL 246
EMNKLWVRMQHQG +R+KERRE+ER ELR LVG NL LS+L+ + D Y+ VLP +L
Sbjct: 184 TEMNKLWVRMQHQGPAREKERREKERGELRDLVGKNLHVLSQLEGVDLDMYRDTVLPRVL 243
Query: 247 EQVVSCRDAIAQEYLMECIIQVFPDEFHLATLTAFLKSCAELQAGVNVKNILIALIDRLS 306
EQ+V+CRD IAQ YL++CIIQVFPDE+HL TL L +C +LQA V++ +L L++RLS
Sbjct: 244 EQIVNCRDEIAQYYLIDCIIQVFPDEYHLQTLDVLLGACPQLQASVDIMTVLSRLMERLS 303
Query: 307 LYAQKNKEFNSLF---ETFSE---QVASIVQSRIDMPAEDIVALQVSLINLALKCYPDKV 360
YA N E F E FS+ + +++++ DMP V L SL+ L +PD++
Sbjct: 304 NYAALNAEVLPYFLQVEAFSKLNNAIGKVIEAQEDMPILSAVTLYSSLLKFTLHVHPDRL 363
Query: 361 DYIDKILQTTVETFQ-KLNIERVEYNTPVSRELMRLLKIFIDQYNNILTVIQLTYFAPLM 419
DY D++L + V+ K I+ +T ++EL+ LL +++YN+++T ++LT + ++
Sbjct: 364 DYADQVLGSCVKQLSGKGKID----DTRATKELVSLLSAPLEKYNDVVTALKLTNYPLVV 419
Query: 420 ELFDFYGRKSVSAYLITNALNNDTLVPTSESVDSILTIVSSLVQDQDDQPAEEEDPEDFA 479
E D ++ ++ ++ + + N+TL+ T+E V+++ ++ ++ D D+ E D +DF
Sbjct: 420 EYLDTETKRIMATVIVRSIMKNNTLITTAEKVEALFELIKGIINDLDEPQGLEVDEDDFQ 479
Query: 480 EEQGLLGRLVHQFKSDVPDQQYLILSTARKHFQAGGKKRIKHTLPPLVFQAYQLATQFSA 539
EEQ + L+H +D P++ + I++ +KHF GG KR+K T+PPLV +L +
Sbjct: 480 EEQNSVALLIHMLYNDDPEEMFKIVNVLKKHFLTGGPKRLKFTIPPLVVSTLKLIRRLPV 539
Query: 540 LREEDEMWSKKCS----KIFRFCHQIILSLIKAELAELPLRLFLQGAMTIGSIDFENHET 595
E D + K+ S KIF+F +QII +L +L RL+LQ A D E
Sbjct: 540 --EGDNPFGKEASVTATKIFQFLNQIIEALPNVPSPDLAFRLYLQCAEAADKCD---EEP 594
Query: 596 ISYEFISQALSLYEEEISESKCQLAAITLLVGTFEKMSCFGEENAEPIRTQSALAASKLF 655
I+YEF +QA LYEEEIS+SK Q+ A+ L++GT ++M FG EN + + ++ A+KL
Sbjct: 595 IAYEFFTQAYILYEEEISDSKAQVTALQLIIGTLQRMQVFGVENRDTLTHKATGYAAKLL 654
Query: 656 KKPDQCSGVCTCSHLFWSGKNSQGEEIRDGKRVLECLKKGVRIASQCMDM-------SVQ 708
KKPDQC V CSHLFW E I+DG+RVL CLK+ ++IA+ + +
Sbjct: 655 KKPDQCRAVYACSHLFWL---EDRETIQDGERVLLCLKRALKIANSAQQVANTARGSTGS 711
Query: 709 VQLFIELLNHYIYYFEKKNEHITVAMLNQLIGKIRDELANLESNEETEQISKHFTNTLFH 768
V LFIE+LN Y+Y++EK ITV + LI I++E ES F TL
Sbjct: 712 VTLFIEILNKYLYFYEKGVPQITVESVESLIKLIKNE----ESMPSDPSAESFFATTLEF 767
Query: 769 LRNRQEGPPVDGISYEGL 786
+ +++ G Y+ +
Sbjct: 768 MEFQKQKEGAIGERYQAI 785
>sp|Q54C24|VPS35_DICDI Vacuolar sorting protein 35 OS=Dictyostelium discoideum GN=vps35
PE=3 SV=1
Length = 781
Score = 577 bits (1487), Expect = e-163, Method: Compositional matrix adjust.
Identities = 321/752 (42%), Positives = 481/752 (63%), Gaps = 29/752 (3%)
Query: 6 SPSEEQDRLLEEASHIVKTQSLQMKRCLDSDKLMDALKHASTMLSELRTSLLSPKNYYEL 65
SP EEQ + EEA + V Q MK LD+ KLMDALK+AS +++ELRTSLLSPK+YY L
Sbjct: 14 SPEEEQAKFFEEAKNNVMIQGHHMKLSLDNSKLMDALKYASNIINELRTSLLSPKSYYAL 73
Query: 66 YMAVTDELRQLELYLVDEFQRGRKVPDLYELVQYAGNIVPRLYLLITVALVYIKTNSSLK 125
Y+ D L+ L YL +E + G+K+ +LYE+VQ+AGN++PRLYLLITV VYIKT +
Sbjct: 74 YLVAFDYLQYLNTYLYEE-KHGKKMIELYEVVQHAGNVLPRLYLLITVGSVYIKTKQAPA 132
Query: 126 RDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTPEDEGDQAEGTVRDSVDFILMN 185
+D+LKDL+EMCRGVQHP RGLFLR+YL + T++ LPD + GTV DS+DFI+ N
Sbjct: 133 KDVLKDLIEMCRGVQHPTRGLFLRHYLSEVTKDKLPDI---DSSVENGTVMDSIDFIIQN 189
Query: 186 FAEMNKLWVRMQHQGHSRDKERREREREELRILVGTNLVRLSELDSITRDKYKKLVLPGI 245
F E NKLWVRMQHQ ++D+ERRE ER ELR+LVG NL RL++LD + + Y ++VLP +
Sbjct: 190 FTETNKLWVRMQHQAPTKDRERRENERLELRLLVGKNLSRLAQLDGVDQKTYSEVVLPKV 249
Query: 246 LEQVVSCRDAIAQEYLMECIIQVFPDEFHLATLTAFLKSCAELQAGVNVKNILIALIDRL 305
+EQ+++C+D IAQ+YLME +IQVFPDEFHLATL L++CA+LQ+GV+VK I+ +LIDRL
Sbjct: 250 VEQIINCKDKIAQQYLMEILIQVFPDEFHLATLDIILQTCAQLQSGVDVKTIIASLIDRL 309
Query: 306 SLYAQKNKEFN----SLFETFSEQVASIVQSRIDMPAEDIVALQVSLINLALKCYPDKVD 361
+ +A +N + +F+ F V I+Q+R +M +DI+ L VSL+NL LKCYP D
Sbjct: 310 ANFATRNADLVPDNIKIFDIFFNNVKEIIQARPNMELQDILGLHVSLLNLTLKCYPTNKD 369
Query: 362 YIDKILQTTVETFQKLNIERVEYNTPVS-RELMRLLKIFIDQYNNILTVIQLTYFAPLME 420
+++L +N + + N P +++++LL+I +D + N+L V++L+ + PL+
Sbjct: 370 NANEVLGLCQSII--VNKAKEDINKPTCVKQIIQLLQIPLDVFKNVLVVLKLSNYQPLIS 427
Query: 421 LFDFYGRKSVSAYLITNALNNDTLVPTSESVDSILTIVSSLVQDQDDQPAEEE-DPEDFA 479
+ RK VS ++ N +NN T++ E+V+++L + +L++D+ DQP ++ D EDF
Sbjct: 428 CLSYNNRKKVSLDIVNNTINNSTIIEEPEAVNNLLETIQTLIKDEQDQPDMDDIDKEDFQ 487
Query: 480 EEQGLLGRLVHQFKSDVPDQQYLILSTARKHFQAGGKKRIKHTLPPLVFQAYQLATQF-- 537
EEQ + L+H F S+ P++ + I AR HF GG RI+HTL PLVF + + F
Sbjct: 488 EEQNKVASLIHLFDSEDPEKLFKIYIIARGHFGKGGPHRIRHTLVPLVFCSLRFIRNFKQ 547
Query: 538 ----SALREEDEMWSKKCSKIFRFCHQIILSLIKAELAELPLRLFLQGAMTIGSIDFENH 593
+ ++ W SKIF F + I +L +LA+L RL+LQ T F++
Sbjct: 548 QVDSGVISLDENKWIAIGSKIFTFVSETIKALADIKLADLSFRLYLQALQT-----FDHC 602
Query: 594 ETISY--EFISQALSLYEEEISESKCQLAAITLLVGTFEKMSCFGEENAEPIRTQSALAA 651
+S E +AL +++E+I++ K Q+ A+ LL+ T +S EE E + Q+ A
Sbjct: 603 GLVSRVKELAIKALLIFQEDIADFKAQVMALQLLISTLNSLSIPNEEIYESLAAQTIKQA 662
Query: 652 SKLFKKPDQCSGVCTCSHLFWSGKNSQGEEIRDGKRVLECLKKGVRIASQCMDMSVQVQL 711
S+L DQ + TCSHLFW S+ + ++ VL+ LKK + I S + S +
Sbjct: 663 SRLLLPQDQAKLISTCSHLFWVDNPSR--QYQNPDSVLQALKKALSIISN--ESSPGLGT 718
Query: 712 FIELLNHYIYYFEKKNEHITVAMLNQLIGKIR 743
F+++LN ++Y +K+ + + + ++ L+ IR
Sbjct: 719 FVDILNECLFYCDKETDAVPIQFVSDLVELIR 750
>sp|A8R7K9|VP35C_ARATH Vacuolar protein sorting-associated protein 35C OS=Arabidopsis
thaliana GN=VPS35C PE=2 SV=1
Length = 790
Score = 569 bits (1466), Expect = e-161, Method: Compositional matrix adjust.
Identities = 323/768 (42%), Positives = 475/768 (61%), Gaps = 35/768 (4%)
Query: 8 SEEQDRLLEEASHIVKTQSLQMKRCLDSDKLMDALKHASTMLSELRTSLLSPKNYYELYM 67
+++ ++ L A VK + M+R +DS+ L DALK ++ MLSELRTS LSP YYELYM
Sbjct: 3 ADDDEKWLAAAIAAVKQNAFYMQRAIDSNNLKDALKFSAQMLSELRTSKLSPHKYYELYM 62
Query: 68 AVTDELRQLELYLVDEFQRGRKVPDLYELVQYAGNIVPRLYLLITVALVYIKTNSSLKRD 127
V +EL LE++ +E RG + +LYELVQ+AGNI+PRLYLL T+ VYIK+ D
Sbjct: 63 RVFNELGTLEIFFKEETGRGCSIAELYELVQHAGNILPRLYLLCTIGSVYIKSKDVTATD 122
Query: 128 LLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTPED-EGDQAEGTVRDSVDFILMNF 186
+LKDLVEMCR VQHPLRGLFLR+YL Q TR+ LP D EGD ++++F+L NF
Sbjct: 123 ILKDLVEMCRAVQHPLRGLFLRSYLAQVTRDKLPSIGSDLEGDGDAHM--NALEFVLQNF 180
Query: 187 AEMNKLWVRMQHQGHSRDKERREREREELRILVGTNLVRLSELDSITRDKYKKLVLPGIL 246
EMNKLWVRMQHQG SR+KE+RE+ER ELR LVG NL LS+L+ + Y+ VLP IL
Sbjct: 181 TEMNKLWVRMQHQGPSREKEKREKERNELRDLVGKNLHVLSQLEGVDLGIYRDTVLPRIL 240
Query: 247 EQVVSCRDAIAQEYLMECIIQVFPDEFHLATLTAFLKSCAELQAGVNVKNILIALIDRLS 306
EQVV+C+D +AQ YLM+CIIQVFPD+FHL TL L +C +LQ V++K +L L++RLS
Sbjct: 241 EQVVNCKDELAQCYLMDCIIQVFPDDFHLQTLDVLLGACPQLQPSVDIKTVLSGLMERLS 300
Query: 307 LYAQKNKEFNSLF---ETFSE---QVASIVQSRIDMPAEDIVALQVSLINLALKCYPDKV 360
YA + E F E FS+ + +V+++ D+PA V L + L+ L Y D++
Sbjct: 301 NYAASSVEALPNFLQVEAFSKLNYAIGKVVEAQADLPAAASVTLYLFLLKFTLHVYSDRL 360
Query: 361 DYIDKILQTTVETFQKLNIERVEYNTPVSRELMRLLKIFIDQYNNILTVIQLTYFAPLME 420
DY+D++L + V +L+ + +++++ L +++YNN++T+++LT + +ME
Sbjct: 361 DYVDQVLGSCV---TQLSATGKLCDDKAAKQIVAFLSAPLEKYNNVVTILKLTNYPLVME 417
Query: 421 LFDFYGRKSVSAYLITNALNNDTLVPTSESVDSILTIVSSLVQDQDDQPAEEEDPEDFAE 480
D K+++ L+ + N+T + T++ VD++ + L++D D +E D EDF E
Sbjct: 418 YLDRETNKAMAIILVQSVFKNNTHIATADEVDALFELAKGLMKDFDGTIDDEIDEEDFQE 477
Query: 481 EQGLLGRLVHQFKSDVPDQQYLILSTARKHFQAGGKKRIKHTLPPLVFQAYQLATQFSAL 540
EQ L+ RLV++ D P++ I+ T RKH AGG KR+ T+PPLVF A +L + L
Sbjct: 478 EQNLVARLVNKLYIDDPEEMSKIIFTVRKHIVAGGPKRLPLTIPPLVFSALKLIRR---L 534
Query: 541 REEDEM-----WSKKCSKIFRFCHQIILSLIKAELAELPLRLFLQGAMTIGSIDFENHET 595
R DE S +I + + + L +L LRL+LQ A + + ET
Sbjct: 535 RGGDENPFGDDASATPKRILQLLSETVEVLSDVSAPDLALRLYLQCAQAANNCEL---ET 591
Query: 596 ISYEFISQALSLYEEEISESKCQLAAITLLVGTFEKMSCFGEENAEPIRTQSALAASKLF 655
++YEF ++A LYEEEIS+SK Q+ A+ L++GT ++M F EN + + ++ +++L
Sbjct: 592 VAYEFFTKAYLLYEEEISDSKAQVTALRLIIGTLQRMRVFNVENRDTLTHKATGYSARLL 651
Query: 656 KKPDQCSGVCTCSHLFWSGKNSQGEEIRDGKRVLECLKKGVRIASQCMDM---------S 706
+KPDQC V C+HLFW+ + E ++DG+RV+ CLK+ RIA M +
Sbjct: 652 RKPDQCRAVYECAHLFWA---DECENLKDGERVVLCLKRAQRIADAVQQMANASRGTSST 708
Query: 707 VQVQLFIELLNHYIYYFEKKNEHITVAMLNQLIGKIRDELANLESNEE 754
V L++ELLN Y+Y+ EK N+ +T + L I+ E +ES E
Sbjct: 709 GSVSLYVELLNKYLYFLEKGNQQVTGDTIKSLAELIKSETKKVESGAE 756
>sp|O74552|VPS35_SCHPO Vacuolar protein sorting-associated protein 35
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps35 PE=1 SV=2
Length = 836
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 284/787 (36%), Positives = 435/787 (55%), Gaps = 66/787 (8%)
Query: 1 MTPLPSPSEEQDRLLEEASHIVKTQSLQMKRCLDSDKLMDALKHASTMLSELRTSLLSPK 60
M + + +EE R LEE+ +I K S M+R L + +LMDA ++ S L E+R S L+PK
Sbjct: 1 MNGINTANEEITRSLEESLNICKQSSRLMQRNLQTGRLMDAFRNCSISLVEMRNSALTPK 60
Query: 61 NYYELYMAVTDELRQLELYLVDEFQRG-RKVPDLYELVQYAGNIVPRLYLLITVALVYIK 119
YYELYM + LR L L++ G + DLYELVQYAG+IVPRLYL+ITV Y++
Sbjct: 61 QYYELYMFNMESLRLLGGTLLETHLNGTHNLMDLYELVQYAGSIVPRLYLMITVGSAYLE 120
Query: 120 TNSSLKRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTPEDEGDQA-EGTVRDS 178
T ++L R+++ DL++MCRGVQHPLRGLFLR+YLL TR LP EDE D + +GTV DS
Sbjct: 121 TPNALVREIMNDLLDMCRGVQHPLRGLFLRHYLLTQTRKGLPLGSEDEEDASRKGTVLDS 180
Query: 179 VDFILMNFAEMNKLWVRMQHQGHSRDKERREREREELRILVGTNLVRLSELDSITRDKYK 238
V F+++NF EMNKLWVR+QH G ++ +R +ER EL++LVG NLVRLS+L+ + D Y+
Sbjct: 181 VKFLVINFTEMNKLWVRIQHLGPIKEFSKRTQERNELKVLVGLNLVRLSQLN-LDIDTYR 239
Query: 239 KLVLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLATLTAFLKSCAELQAGVNVKNIL 298
VLP I+EQ++ CRD++AQEYL+E I Q F D HL TL + + +L VNV ++
Sbjct: 240 DHVLPAIIEQIIECRDSLAQEYLVEVICQAFSDNMHLQTLDTYFGTVIKLSPSVNVTQLV 299
Query: 299 IALIDRLSLYAQKNKEFNSLFETFSE---------------------------------- 324
+A+++RL+ Y Q+ E +S E SE
Sbjct: 300 VAMLNRLTDYVQREYESDSSNEDESETVTEKLGDIKINEEVQQKDEQECPGDKVIPPEYA 359
Query: 325 -------QVASIVQSRIDMPAEDIVALQVSLINLALKCYPDKVDYIDKILQTTVE-TFQK 376
V ++QSR +P + IV++ S++N L+CYP K Y D++ Q E +
Sbjct: 360 IQEVLWSHVVEVIQSRSGLPLDCIVSILSSILNFFLRCYPYKPQYADRVFQYINEHIINQ 419
Query: 377 LNIERVEYNTPVSRELMRLLKIFIDQYNNILTVIQLTYFAPLMELFDFYGRKSVSAYLIT 436
++ + P+ + L +L + + + + ++L F P+ D R ++ ++
Sbjct: 420 PSLRSALHERPLQKSLCAILLLPLTYFPSFSYCLELQNFLPVFNAQDPNLRYDIARMIVQ 479
Query: 437 NALNNDTLVPTSESVDSILTIVSSLVQDQDDQPAEEEDPEDFAEEQGLLGRLVHQFKSDV 496
+ + +L VS ++ E+ D ++ + +VH +D
Sbjct: 480 KIIEKGHSLSELTEAQELLGFVSVII---------EKKGVDSLDDLQNVALMVHYLNNDD 530
Query: 497 PDQQYLILSTARKHFQAGGKKRIKHTLPPLVFQAYQLATQFSALREEDEMWSKKCSKIFR 556
P Q IL + + F G+ +K+ LP +V + LA F + D W++K ++
Sbjct: 531 PQIQIEILRSLKDTFIKAGEN-VKYLLPVVVNRCIFLARNFRIFKCMD--WAEKVRLLWE 587
Query: 557 FCHQIILSLIK-AELAELPLRLFLQGAMTIGSIDFENHETISYEFISQALSLYEEEISES 615
F + I L K + EL L L+L A D EN+ +YEF +QA S+YEE + +S
Sbjct: 588 FVNTCINVLYKNGDSLELCLALYLSAAEM---ADQENYPDFAYEFFTQAFSIYEESVLDS 644
Query: 616 KCQLAAITLLVGTFEKMSCFGEENAEPIRTQSALAASKLFKKPDQCSGVCTCSHLFW--- 672
+ Q + +++G +K F ++ + + T+ L ASKL KKPDQC G+ SHL+W
Sbjct: 645 ELQYQQLLMIIGKLQKTRNFSVDDYDTLITKCTLYASKLLKKPDQCCGIYLASHLWWQVA 704
Query: 673 SGKNSQGEEIRDGKRVLECLKKGVRIASQCMDMSVQVQLFIELLNHYIYYFEKKNEHITV 732
SG++S+ +D KRVLECL+K ++IA CMD ++LFI +L Y YY+++ E I
Sbjct: 705 SGEDSR--PFQDPKRVLECLQKSLKIADACMDQLTSLKLFINILERYFYYYDQHCESIIA 762
Query: 733 AMLNQLI 739
++ LI
Sbjct: 763 KHISGLI 769
>sp|P34110|VPS35_YEAST Vacuolar protein sorting-associated protein 35 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS35 PE=1
SV=2
Length = 944
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 284/846 (33%), Positives = 428/846 (50%), Gaps = 130/846 (15%)
Query: 16 EEASHIVKTQSLQMKRCLDSDKLMDALKHASTMLSELRTSLLSPKNYYELYMAVTDELRQ 75
E A ++K ++ M RCL KLM++L+H S ML+ELR LSPK YYELY+ + D L
Sbjct: 8 ENAIAVIKQRTALMNRCLSQHKLMESLQHTSIMLTELRNPNLSPKKYYELYVIIFDSLTN 67
Query: 76 LELYLVDEFQRGRKVPDLYELVQYAGNIVPRLYLLITVALVYIKTNSSLKRDLLKDLVEM 135
L YL++ + + DLYELVQY GN+VPRLYL+ITV Y+ N + K+++LKD++EM
Sbjct: 68 LSTYLIENHPQNHHLADLYELVQYTGNVVPRLYLMITVGTSYLTFNEAPKKEILKDMIEM 127
Query: 136 CRGVQHPLRGLFLRNYLLQCTRNVLPDTPEDEGDQAEGTVRDSVDFILMNFAEMNKLWVR 195
CRGVQ+P+RGLFLR YL Q T+ +LP+ Q FI+ NF EMNKLWVR
Sbjct: 128 CRGVQNPIRGLFLRYYLSQRTKELLPEDDPSFNSQ----------FIMNNFIEMNKLWVR 177
Query: 196 MQHQGHSRDKERREREREELRILVGTNLVRLSELDSITRDKYKKLVLPGILEQVVSCRDA 255
+QHQG R++E R RER+EL+ILVG+ LVRLS++ YK+ +LP ILEQV+ CRD
Sbjct: 178 LQHQGPLRERETRTRERKELQILVGSQLVRLSQIIDDNFQMYKQDILPTILEQVIQCRDL 237
Query: 256 IAQEYLMECIIQVFPDEFHLATLTAFLKSCAELQAGVNVKNILIALIDRLSLYAQKNKEF 315
++QEYL++ I QVF DEFHL TL L++ L V++ I++ L+DRL+ Y + E
Sbjct: 238 VSQEYLLDVICQVFADEFHLKTLDTLLQTTLHLNPDVSINKIVLTLVDRLNDYVTRQLED 297
Query: 316 N------------SLFETFSEQVASIVQSRIDMPAEDIVALQVSLINLALKCYPDKVDYI 363
+ +F TF + + + R D+ + + L S+I L+LK YP+ D +
Sbjct: 298 DPNATSTNAYLDMDVFGTFWDYLTVLNHERPDLSLQQFIPLVESVIVLSLKWYPNNFDNL 357
Query: 364 DKILQTTVE----------------------TFQKLNIERVEYNTPVSRELMRLLKIFID 401
+K+ + ++ +FQ ++ T + K FI
Sbjct: 358 NKLFELVLQKTKDYGQKNISLESEHLFLVLLSFQNSKLQLTSSTTAPPNSPVTSKKHFIF 417
Query: 402 Q-------YNNILTVIQLTYFAPLM-ELFDFYGRKSVSAYLITNALNNDT---LVPTSES 450
Q Y NIL + ++ ++ E+ D + V +ND+ L P S
Sbjct: 418 QLISQCQAYKNILALQSISLQKKVVNEIIDILMDREVEE-----MADNDSESKLHPPGHS 472
Query: 451 ----------VDSILTIVSSLVQDQDDQPA-----------------EEEDPEDFAEEQG 483
V +L+I L+ + PA +EE+ Q
Sbjct: 473 AYLVIEDKLQVQRLLSICEPLIISRSGPPANVASSDTNVDEVFFNRHDEEESWILDPIQE 532
Query: 484 LLGRLVHQFKSDVPDQQYL-------------ILSTARKHFQAGGKKRIKHTLPPLVFQA 530
L L+H + +Q + IL + F GG +K+T P ++
Sbjct: 533 KLAHLIHWIMNTTSRKQTMKNKIQFSLEAQLEILLLIKSSFIKGGIN-VKYTFPAIITNF 591
Query: 531 YQLATQFSALRE------EDE-----MWSKKCSKIFRF---CHQIILSLIKAELAELPLR 576
++L + ++E D +S ++F+F C I + +L L+
Sbjct: 592 WKLMRKCRMIQEYLLKKRPDNKTLLSHYSNLLKQMFKFVSRCINDIFNSCNNSCTDLILK 651
Query: 577 LFLQGAMTIGSIDFENHETISYEFISQALSLYEEEISESKCQLAAITLLVGTFEKM-SCF 635
L LQ A+ + ISY+F SQA +++EE +S+SK QL A+ + + +K S +
Sbjct: 652 LNLQCAILADQLQLNE---ISYDFFSQAFTIFEESLSDSKTQLQALIYIAQSLQKTRSLY 708
Query: 636 GEENAEPIRTQSALAASKLFKKPDQCSGVCTCSHLFWSGKNSQ-GEE-------IRDGKR 687
E + + + L SKL KK DQC V CSHL+W+ + S GEE RDGKR
Sbjct: 709 KEAYYDSLIVRCTLHGSKLLKKQDQCRAVYLCSHLWWATEISNIGEEEGITDNFYRDGKR 768
Query: 688 VLECLKKGVRIASQCMDMSVQVQLFIELLNHYIYYFEKKNE---HITVAMLNQLIGKIRD 744
VLECL++ +R+A MD +L +E+LN +YYF +E HI++ +N LI I+
Sbjct: 769 VLECLQRSLRVADSIMDNEQSCELMVEILNRCLYYFIHGDESETHISIKYINGLIELIKT 828
Query: 745 ELANLE 750
L +L+
Sbjct: 829 NLKSLK 834
>sp|Q09219|CPNA5_CAEEL Copine family protein 5 OS=Caenorhabditis elegans GN=cpna-5 PE=2
SV=2
Length = 717
Score = 36.2 bits (82), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 32 CLDSDKLMDALKHASTMLSELRTSLLSPKNYYELYMAVTDELRQLELYLVDEFQRGRKVP 91
C D +M+A + TM++ L+ S LSP Y M+ R L +++ F RG +V
Sbjct: 436 CRGLDGVMEAYRKTQTMVTPLKESKLSPVINYVTRMSHRSGFRGLHYHVLALFTRG-EVT 494
Query: 92 DLYELVQ 98
DL E+ Q
Sbjct: 495 DLKEIQQ 501
>sp|P0C7Q8|DA1_ARATH Protein DA1 OS=Arabidopsis thaliana GN=DA1 PE=1 SV=1
Length = 532
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 664 VCTCSHLFWSGKNSQGEEIRDGKRV-LECLKKGVRIASQCMDMSVQVQLFIELLN 717
C+C + +N++ E+ DG+++ LECL V QC + +Q+Q F E LN
Sbjct: 271 CCSCERM--EPRNTRYVELNDGRKLCLECLDSAVMDTMQCQPLYLQIQNFYEGLN 323
>sp|Q805M1|C20L_VACCW Uncharacterized protein C20L OS=Vaccinia virus (strain Western
Reserve) GN=VACWR007 PE=4 SV=1
Length = 109
Score = 34.3 bits (77), Expect = 4.4, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 296 NILIALIDRLSLYAQKNKEFNSLFETFSEQVASIVQSRIDMPAEDIVALQV 346
NIL L+DR + QK++ +N+ F+ + VAS + I++P +D + L V
Sbjct: 61 NILRYLLDRFDI--QKDEYYNTAFQNCNNNVASYIGYDINLPTKDGIRLGV 109
>sp|Q6CU63|PALA_KLULA pH-response regulator protein palA/RIM20 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=RIM20 PE=3 SV=1
Length = 652
Score = 33.5 bits (75), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 39 MDALKHASTMLSELRTSLLSPKNYY-ELYMAVTDELRQLELYL 80
++ LKH+S +LSEL+ +++S K +Y +L A+ +L+++E Y+
Sbjct: 589 LEELKHSSNVLSELKENIISGKQFYQDLITALESKLKEIEDYV 631
>sp|Q96Q15|SMG1_HUMAN Serine/threonine-protein kinase SMG1 OS=Homo sapiens GN=SMG1 PE=1
SV=3
Length = 3661
Score = 33.1 bits (74), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 190 NKLWVRMQHQGHSRDKERREREREELRILVGTNLVRLSELDSITRDKYKKLVLPGI--LE 247
++LW+ + Q H R ++ +E++ + N +R E +I R+K+ L+ P + LE
Sbjct: 1963 DELWLGVLLQQHMYVLRRIQQLEDEVKRVQNNNTLRKEEKIAIMREKHTALMKPIVFALE 2022
Query: 248 QVVSCRDAIAQEYLMECIIQVFPD--EFHLATLTAFLKSCAELQAGVNVKNILIALIDRL 305
V S A A+ + + D E L L L + + K I+++L R
Sbjct: 2023 HVRSITAAPAETPHEKWFQDNYGDAIENALEKLKTPLNPAKPGSSWIPFKEIMLSLQQR- 2081
Query: 306 SLYAQKNKEFNSLFETFSEQVASIVQSRIDMPAE 339
AQK + E S +A++ + I +P E
Sbjct: 2082 ---AQKRASYILRLEEISPWLAAMTNTEIALPGE 2112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 270,676,681
Number of Sequences: 539616
Number of extensions: 10978878
Number of successful extensions: 35143
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 35072
Number of HSP's gapped (non-prelim): 50
length of query: 788
length of database: 191,569,459
effective HSP length: 126
effective length of query: 662
effective length of database: 123,577,843
effective search space: 81808532066
effective search space used: 81808532066
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)