Query psy12284
Match_columns 183
No_of_seqs 190 out of 1158
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 23:23:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12284.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12284hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03982 DAGAT: Diacylglycerol 100.0 3.7E-47 7.9E-52 315.6 14.6 181 2-183 116-297 (297)
2 KOG0831|consensus 100.0 1.2E-42 2.6E-47 285.4 14.9 181 2-183 154-334 (334)
3 PLN02783 diacylglycerol O-acyl 100.0 4.9E-35 1.1E-39 245.3 16.4 165 3-182 150-314 (315)
4 cd07987 LPLAT_MGAT-like Lysoph 99.9 3.4E-27 7.4E-32 187.5 12.9 143 2-169 68-212 (212)
5 PRK15018 1-acyl-sn-glycerol-3- 99.8 1.3E-19 2.8E-24 147.4 11.4 117 3-167 108-232 (245)
6 PTZ00261 acyltransferase; Prov 99.8 2.3E-18 5E-23 145.1 11.2 128 3-172 176-326 (355)
7 PLN02901 1-acyl-sn-glycerol-3- 99.7 6.1E-17 1.3E-21 129.1 11.1 114 3-166 92-212 (214)
8 cd07992 LPLAT_AAK14816-like Ly 99.7 1.1E-16 2.3E-21 126.5 9.8 108 3-160 72-202 (203)
9 KOG2848|consensus 99.7 1.2E-16 2.6E-21 128.1 8.7 117 4-166 133-257 (276)
10 cd07983 LPLAT_DUF374-like Lyso 99.6 1.1E-15 2.4E-20 119.1 9.6 114 3-161 67-188 (189)
11 cd07986 LPLAT_ACT14924-like Ly 99.6 3.6E-16 7.7E-21 124.3 6.0 60 16-80 88-151 (210)
12 cd07988 LPLAT_ABO13168-like Ly 99.6 1.7E-14 3.8E-19 110.5 8.5 63 3-75 66-134 (163)
13 PRK08043 bifunctional acyl-[ac 99.5 5E-14 1.1E-18 129.6 11.4 69 3-78 71-142 (718)
14 PRK08633 2-acyl-glycerophospho 99.5 6.8E-14 1.5E-18 133.5 10.8 102 3-139 484-589 (1146)
15 PRK06814 acylglycerophosphoeth 99.5 9.2E-14 2E-18 133.1 11.3 70 3-79 497-569 (1140)
16 cd06551 LPLAT Lysophospholipid 99.5 1.2E-13 2.6E-18 106.7 9.3 108 3-164 70-186 (187)
17 cd07985 LPLAT_GPAT Lysophospho 99.5 1.8E-13 3.9E-18 109.9 10.4 129 3-166 72-234 (235)
18 cd07991 LPLAT_LPCAT1-like Lyso 99.5 2E-13 4.3E-18 108.5 8.8 128 3-167 65-201 (211)
19 COG0204 PlsC 1-acyl-sn-glycero 99.5 2.9E-13 6.2E-18 109.1 9.8 72 3-80 109-186 (255)
20 cd07993 LPLAT_DHAPAT-like Lyso 99.4 3.7E-13 8E-18 106.5 6.3 66 3-75 68-150 (205)
21 cd07984 LPLAT_LABLAT-like Lyso 99.3 6.9E-12 1.5E-16 97.4 9.8 111 5-171 68-184 (192)
22 TIGR00530 AGP_acyltrn 1-acyl-s 99.3 3.5E-12 7.5E-17 92.8 5.1 64 3-73 59-129 (130)
23 PLN02833 glycerol acyltransfer 99.3 2.8E-11 6E-16 104.0 9.4 123 3-164 205-337 (376)
24 cd07989 LPLAT_AGPAT-like Lysop 99.2 5E-11 1.1E-15 91.8 9.7 96 3-141 67-169 (184)
25 PRK03355 glycerol-3-phosphate 99.2 3.4E-11 7.5E-16 111.0 9.9 134 2-162 312-481 (783)
26 KOG4321|consensus 99.1 2.6E-11 5.6E-16 92.9 3.4 143 11-172 97-257 (279)
27 smart00563 PlsC Phosphate acyl 99.1 1.5E-10 3.3E-15 82.2 5.3 66 3-75 45-117 (118)
28 TIGR03703 plsB glycerol-3-phos 99.1 5.9E-10 1.3E-14 103.5 9.9 70 2-79 337-423 (799)
29 PRK04974 glycerol-3-phosphate 99.0 3.6E-10 7.7E-15 105.1 6.8 66 2-74 347-429 (818)
30 COG2121 Uncharacterized protei 99.0 2.1E-09 4.5E-14 84.2 9.7 103 15-162 106-209 (214)
31 KOG2847|consensus 99.0 6.4E-10 1.4E-14 89.3 6.0 122 4-166 122-259 (286)
32 PLN02177 glycerol-3-phosphate 99.0 1.1E-09 2.4E-14 97.2 7.9 68 3-82 340-410 (497)
33 PF01553 Acyltransferase: Acyl 99.0 1.1E-10 2.4E-15 85.1 1.1 65 3-74 61-132 (132)
34 PLN02499 glycerol-3-phosphate 98.9 1.2E-08 2.7E-13 89.7 9.3 67 3-81 327-396 (498)
35 PTZ00374 dihydroxyacetone phos 98.7 2E-08 4.4E-13 93.9 7.3 67 2-75 675-760 (1108)
36 PRK08419 lipid A biosynthesis 98.6 3.3E-07 7.3E-12 76.4 11.1 109 12-171 169-281 (298)
37 PRK14014 putative acyltransfer 98.6 3E-07 6.5E-12 77.1 10.5 71 4-78 134-233 (301)
38 PLN02588 glycerol-3-phosphate 98.6 1.1E-07 2.4E-12 83.9 6.6 65 3-79 367-434 (525)
39 PRK07920 lipid A biosynthesis 98.4 2.1E-06 4.6E-11 71.7 10.1 107 8-171 161-274 (298)
40 PRK11915 glycerol-3-phosphate 98.3 3.2E-06 6.9E-11 76.6 8.0 137 2-162 160-324 (621)
41 PLN02510 probable 1-acyl-sn-gl 98.1 5.4E-05 1.2E-09 65.3 12.0 144 3-168 140-293 (374)
42 PRK06553 lipid A biosynthesis 98.0 6.9E-05 1.5E-09 62.9 10.3 113 9-172 187-301 (308)
43 PRK05646 lipid A biosynthesis 98.0 4.2E-05 9.2E-10 64.2 8.5 65 7-74 174-242 (310)
44 PF03279 Lip_A_acyltrans: Bact 98.0 0.0001 2.2E-09 61.2 10.7 101 16-171 181-286 (295)
45 PRK06628 lipid A biosynthesis 97.9 0.00012 2.5E-09 61.0 10.3 112 9-171 168-281 (290)
46 TIGR02207 lipid_A_htrB lipid A 97.7 0.00023 5.1E-09 59.5 8.9 60 12-74 174-238 (303)
47 PRK08943 lipid A biosynthesis 97.7 0.00035 7.7E-09 58.8 9.4 60 12-74 187-250 (314)
48 cd07990 LPLAT_LCLAT1-like Lyso 97.6 2.2E-05 4.9E-10 61.3 1.2 60 3-73 72-140 (193)
49 PRK06946 lipid A biosynthesis 97.6 0.00024 5.2E-09 59.2 7.5 59 13-74 167-229 (293)
50 TIGR02208 lipid_A_msbB lipid A 97.6 0.00055 1.2E-08 57.3 9.4 60 12-74 178-241 (305)
51 PRK08733 lipid A biosynthesis 97.6 0.00028 6.2E-09 59.1 7.3 60 12-74 180-243 (306)
52 PRK06860 lipid A biosynthesis 97.5 0.00055 1.2E-08 57.4 8.7 61 11-74 179-244 (309)
53 PRK05906 lipid A biosynthesis 97.5 0.0011 2.3E-08 58.7 10.8 107 12-171 195-305 (454)
54 PRK08905 lipid A biosynthesis 97.5 0.00034 7.4E-09 58.2 7.3 63 9-74 154-220 (289)
55 PRK08706 lipid A biosynthesis 97.5 0.0005 1.1E-08 57.1 8.1 64 8-74 158-226 (289)
56 PRK08734 lipid A biosynthesis 97.3 0.0011 2.3E-08 55.7 8.2 60 12-74 169-232 (305)
57 PRK08025 lipid A biosynthesis 97.1 0.0022 4.7E-08 53.7 8.0 65 7-74 173-242 (305)
58 COG1560 HtrB Lauroyl/myristoyl 97.1 0.0033 7.2E-08 52.9 8.5 63 8-74 176-243 (308)
59 PRK05645 lipid A biosynthesis 97.0 0.0028 6E-08 52.8 7.5 63 9-74 165-231 (295)
60 PLN02380 1-acyl-sn-glycerol-3- 97.0 0.013 2.9E-07 50.7 11.3 55 3-68 132-195 (376)
61 PRK15174 Vi polysaccharide exp 96.9 0.0093 2E-07 55.1 10.4 59 13-74 532-593 (656)
62 COG2937 PlsB Glycerol-3-phosph 95.3 0.062 1.3E-06 49.6 7.0 66 2-74 341-423 (810)
63 PLN02349 glycerol-3-phosphate 94.8 0.15 3.2E-06 44.3 7.8 125 17-170 284-418 (426)
64 KOG3730|consensus 93.5 0.33 7.2E-06 43.2 7.3 116 3-140 197-332 (685)
65 KOG1505|consensus 88.0 5.4 0.00012 34.3 9.4 34 4-37 120-162 (346)
66 COG3176 Putative hemolysin [Ge 87.6 0.42 9E-06 40.0 2.3 61 20-83 150-210 (292)
67 KOG3729|consensus 78.7 2.8 6.1E-05 38.0 3.9 66 2-74 203-291 (715)
68 PF04028 DUF374: Domain of unk 74.3 3.2 7E-05 27.5 2.4 23 15-37 48-70 (74)
69 COG4365 Uncharacterized protei 69.4 7.7 0.00017 34.2 4.2 55 17-77 72-132 (537)
70 PF11454 DUF3016: Protein of u 62.0 14 0.00031 27.6 4.0 53 127-182 3-55 (141)
71 COG0528 PyrH Uridylate kinase 48.6 35 0.00076 27.8 4.4 56 15-81 114-169 (238)
72 TIGR02744 TrbI_Ftype type-F co 47.5 25 0.00054 25.2 3.1 53 119-171 24-82 (112)
73 PF12652 CotJB: CotJB protein; 45.1 43 0.00093 22.4 3.8 29 144-172 26-54 (78)
74 PF13276 HTH_21: HTH-like doma 43.1 19 0.00042 22.2 1.8 22 153-175 3-24 (60)
75 COG3411 Ferredoxin [Energy pro 41.3 28 0.0006 22.4 2.3 26 8-36 2-27 (64)
76 cd00311 TIM Triosephosphate is 39.0 1.8E+02 0.0039 23.6 7.3 47 126-172 155-205 (242)
77 PF00875 DNA_photolyase: DNA p 38.1 25 0.00054 26.2 2.1 20 58-77 17-36 (165)
78 PLN02429 triosephosphate isome 36.7 2.7E+02 0.0058 23.7 8.5 47 126-172 218-269 (315)
79 PTZ00333 triosephosphate isome 34.0 2.6E+02 0.0057 22.9 7.7 46 127-172 163-213 (255)
80 KOG2898|consensus 31.1 62 0.0013 28.0 3.5 44 27-80 212-255 (354)
81 PF09677 TrbI_Ftype: Type-F co 30.8 1.1E+02 0.0024 21.8 4.3 31 142-172 52-82 (111)
82 PLN02561 triosephosphate isome 29.9 3.1E+02 0.0068 22.5 7.7 47 126-172 159-210 (253)
83 PF03652 UPF0081: Uncharacteri 29.6 1.1E+02 0.0024 22.3 4.3 35 126-160 51-85 (135)
84 PRK13703 conjugal pilus assemb 29.6 65 0.0014 26.4 3.3 50 17-77 135-185 (248)
85 PRK13717 conjugal transfer pro 29.2 1.2E+02 0.0025 22.4 4.2 29 143-171 67-95 (128)
86 PF15209 IL31: Interleukin 31 29.0 1.2E+02 0.0026 22.5 4.2 35 146-181 12-47 (137)
87 COG3741 HutG N-formylglutamate 27.0 81 0.0018 26.2 3.4 45 127-172 97-145 (272)
88 PF13728 TraF: F plasmid trans 26.7 1.2E+02 0.0027 24.0 4.4 50 17-77 112-162 (215)
89 PF13865 FoP_duplication: C-te 26.2 1.4E+02 0.003 19.6 3.8 27 144-170 40-70 (74)
90 COG4764 Uncharacterized protei 26.0 11 0.00024 28.9 -1.7 32 51-82 42-74 (197)
91 COG0816 Predicted endonuclease 25.2 99 0.0022 23.1 3.3 32 126-157 53-84 (141)
92 PRK12359 flavodoxin FldB; Prov 24.1 89 0.0019 23.9 3.0 34 130-163 138-171 (172)
93 TIGR02739 TraF type-F conjugat 23.7 96 0.0021 25.5 3.3 50 17-77 142-192 (256)
94 PRK14556 pyrH uridylate kinase 23.6 1.2E+02 0.0025 24.9 3.7 54 15-80 125-178 (249)
95 PF14488 DUF4434: Domain of un 23.4 1.1E+02 0.0024 23.2 3.4 48 127-175 78-125 (166)
96 PF07085 DRTGG: DRTGG domain; 23.3 1.4E+02 0.003 20.3 3.7 16 54-69 74-89 (105)
97 PF02026 RyR: RyR domain; Int 21.4 1.9E+02 0.004 19.9 3.9 36 135-172 6-41 (94)
98 cd07571 ALP_N-acyl_transferase 21.4 1.1E+02 0.0024 24.7 3.3 45 23-73 36-80 (270)
No 1
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Probab=100.00 E-value=3.7e-47 Score=315.60 Aligned_cols=181 Identities=46% Similarity=0.861 Sum_probs=174.3
Q ss_pred ccccCCCeeecHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccccc
Q psy12284 2 QLAFFSALSASEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLYD 81 (183)
Q Consensus 2 ~l~~~G~i~v~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~ 81 (183)
.++++|+++++|++++.+|++-++|.+|+|+|||.+|++.+.+|++.++++.|+||+|+|+++|+|||||+.+|++++|.
T Consensus 116 ~~~~~G~~~~sr~s~~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LVPv~~FGE~d~~~ 195 (297)
T PF03982_consen 116 FLLWLGAVSASRESIRYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLVPVYSFGENDLYD 195 (297)
T ss_pred hhhhcccccccccccceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEEeEEEeCChhhee
Confidence 46889999999999999998766788999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCchHHHHHHHHHHHcCccccccccccccc-ccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHH
Q psy12284 82 QVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQ-YSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSL 160 (183)
Q Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~-~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l 160 (183)
++.+|.|++++++|+|+++.+|+++|+|+|||+|+ ++||++|++.+++++||+||++++.++||+|++|++|++|+++|
T Consensus 196 ~~~~~~~~~~r~~q~~~~~~~g~~~~~f~Grg~f~~~~~gllP~r~pi~~VVG~PI~v~~~~~Pt~e~Vd~~H~~Y~~~L 275 (297)
T PF03982_consen 196 QVQNPPGSWLRRFQRWLKKKFGFSLPLFWGRGIFPSYSFGLLPYRRPITTVVGKPIPVPKIENPTQEDVDKLHARYIEAL 275 (297)
T ss_pred eccCCchhHHHHHHHHHHHHcCcceeeeecccccCCCcccccccCCceEEEeeceecccCCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 88999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCceEEC
Q psy12284 161 TQLFEDHKEKYVDDPKTAKLVIE 183 (183)
Q Consensus 161 ~~l~~~~~~~~g~~~~~~~l~~~ 183 (183)
++|||+||..|| +++|++|+|.
T Consensus 276 ~~LFd~~K~~~g-~~~d~~L~~~ 297 (297)
T PF03982_consen 276 RELFDKHKAKYG-YPPDTKLVIN 297 (297)
T ss_pred HHHHHHHHHhcC-CCCCCeEEeC
Confidence 999999999999 9999999984
No 2
>KOG0831|consensus
Probab=100.00 E-value=1.2e-42 Score=285.37 Aligned_cols=181 Identities=48% Similarity=0.842 Sum_probs=175.8
Q ss_pred ccccCCCeeecHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccccc
Q psy12284 2 QLAFFSALSASEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLYD 81 (183)
Q Consensus 2 ~l~~~G~i~v~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~ 81 (183)
.+++.|.++++|+++...|.+..+|.+|+|.+||.+|++.+.||...+.++.|+||+|+|+++|+++||++.+|++++|+
T Consensus 154 ~l~~~Gl~svSk~s~~~~Ls~~~~Gnav~IVvGGAqEaL~s~PG~~~L~Lk~RkGFVklAl~tGs~LVP~~sFGE~di~~ 233 (334)
T KOG0831|consen 154 YLMSLGLCSVSRESIEYLLSKKGKGNAVVIVVGGAQEALDSHPGKNTLTLKNRKGFVKLALQTGASLVPVFSFGENDVYK 233 (334)
T ss_pred HHHHcCCccccHHHHHHHhccCCCCCEEEEEeCchHHHHHhCCCCceEEEeccccHHHHHHHhCCCcCceeecccceeee
Confidence 47899999999999999999877799999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHH
Q psy12284 82 QVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLT 161 (183)
Q Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~ 161 (183)
|+.+|+|++++++|.|.++++|+++|+|+|||++|++||++|.+.+|+++||+||++++..+|++|+++++|++|+++|+
T Consensus 234 q~~np~~s~lr~~Q~~~k~~~gf~~~~f~grg~~~~~~gllP~r~pi~~VVG~Pi~v~k~~~Pt~e~id~~H~~y~~~L~ 313 (334)
T KOG0831|consen 234 QVENPKGSRLRKFQEWFKKIFGFTPPIFYGRGFFQYTFGLLPFRRPITTVVGEPIPVPKTENPTQEQIDKYHGLYIDALR 313 (334)
T ss_pred eecCCCcchhHHHHHHHHHhcCcccceEecccccccccccccccCcceeEecCccCCccCcCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999889999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCceEEC
Q psy12284 162 QLFEDHKEKYVDDPKTAKLVIE 183 (183)
Q Consensus 162 ~l~~~~~~~~g~~~~~~~l~~~ 183 (183)
+||++||..|| .+++++|+|+
T Consensus 314 ~LF~~hK~k~g-~~~~~~l~~~ 334 (334)
T KOG0831|consen 314 KLFDEHKTKYG-VPETQKLLII 334 (334)
T ss_pred HHHHhhccccC-CChhhceecC
Confidence 99999999999 9999999875
No 3
>PLN02783 diacylglycerol O-acyltransferase
Probab=100.00 E-value=4.9e-35 Score=245.27 Aligned_cols=165 Identities=38% Similarity=0.601 Sum_probs=144.2
Q ss_pred cccCCCeeecHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeecccccccc
Q psy12284 3 LAFFSALSASEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLYDQ 82 (183)
Q Consensus 3 l~~~G~i~v~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~~ 82 (183)
++++|++|+||+++.+.++ +|.+++|||||++|+.+..+++...++++|+||+++|+++|+|||||+++|++++|+.
T Consensus 150 ~~~~G~ipv~R~~~~~~Lk---~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~G~~~~~~~ 226 (315)
T PLN02783 150 WTWLGLDPASRKNFTSLLK---AGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCFGQTRAYKW 226 (315)
T ss_pred HHHcCCeEEcHHHHHHHHh---CCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEECchhhhhh
Confidence 5689999999999887775 7999999999999988877776655578999999999999999999999999999877
Q ss_pred ccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy12284 83 VPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQ 162 (183)
Q Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~ 162 (183)
+. +.++|. .|+.+.++++++.|||+... ++|+|++++++||+||++++..++++|+++++|++++++|++
T Consensus 227 ~~-~~~~~~----~~l~r~~~~~p~~~wg~~~~-----piP~~~~i~vvvG~PI~v~~~~~~~~e~v~~~~~~~~~al~~ 296 (315)
T PLN02783 227 WK-PGGPLV----PKLSRAIGFTPIVFWGRYGS-----PIPHRTPMHVVVGKPIEVKKNPQPSQEEVAEVLEQFVEALQD 296 (315)
T ss_pred hc-CCccHH----HHHHHhcCcCceeeecccCc-----ccCCCceEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 64 444443 46778899999999998432 588999999999999999987778999999999999999999
Q ss_pred HHHHhhcccCCCCCCCceEE
Q psy12284 163 LFEDHKEKYVDDPKTAKLVI 182 (183)
Q Consensus 163 l~~~~~~~~g~~~~~~~l~~ 182 (183)
|+++|+..|| + +|.+|+|
T Consensus 297 L~~~~k~~~g-~-~~~~L~i 314 (315)
T PLN02783 297 LFEKHKARAG-Y-GDLELVV 314 (315)
T ss_pred HHHHHHHhcC-C-CCceEEe
Confidence 9999999999 8 4679987
No 4
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.
Probab=99.95 E-value=3.4e-27 Score=187.45 Aligned_cols=143 Identities=39% Similarity=0.698 Sum_probs=114.4
Q ss_pred ccccCCCeeecHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccccc
Q psy12284 2 QLAFFSALSASEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLYD 81 (183)
Q Consensus 2 ~l~~~G~i~v~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~ 81 (183)
.+.++|+++++|+++.++|+ +|.+|+|||||+++...+.+++...++++|+||++||+++|+|||||+++|++++|.
T Consensus 68 ~~~~~g~i~~~r~~~~~~L~---~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~ 144 (212)
T cd07987 68 LLRRLGAVPGSRENCVRLLR---EGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFR 144 (212)
T ss_pred HHHHcCCcccCHHHHHHHhc---CCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHh
Confidence 35788999999998877775 899999999999877766556665668999999999999999999999999999875
Q ss_pred cccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCC--CCCCCHHHHHHHHHHHHHH
Q psy12284 82 QVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPK--VEQPSNDLIAEYHKKYVDS 159 (183)
Q Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~--~~~~~~e~~~~~~~~~~~~ 159 (183)
....+.+ .++.+++.. ..+|++.+++++||+||++++ ..+++.|++++++++++++
T Consensus 145 ~~~~~~~-----------------~~~~~~~~~-----l~~p~~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (212)
T cd07987 145 VLGDPDG-----------------PVGKRLFRL-----LPLPRRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAA 202 (212)
T ss_pred hhccCCC-----------------Cceeehhce-----eccCCCCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 4322111 122233221 146777899999999999987 3567899999999999999
Q ss_pred HHHHHHHhhc
Q psy12284 160 LTQLFEDHKE 169 (183)
Q Consensus 160 l~~l~~~~~~ 169 (183)
|++|+++|+.
T Consensus 203 l~~l~~~~~~ 212 (212)
T cd07987 203 LRELIEKHKK 212 (212)
T ss_pred HHHHHHHhcC
Confidence 9999999874
No 5
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional
Probab=99.82 E-value=1.3e-19 Score=147.38 Aligned_cols=117 Identities=16% Similarity=0.228 Sum_probs=84.7
Q ss_pred cccCCCeeecHHHH-------HHHHhccC-CCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeee
Q psy12284 3 LAFFSALSASEQSI-------THVLTHSK-GGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 3 l~~~G~i~v~r~~~-------~~~l~~l~-~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
+.++|++|+||++. +++.+.++ +|.+++|||||| |+.+|.. .+||+|++++|+++|+|||||++.
T Consensus 108 ~~~~g~i~VdR~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGT----Rs~~g~l---~~Fk~Ga~~lA~~~~~PIvPv~i~ 180 (245)
T PRK15018 108 YWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGT----RSRGRGL---LPFKTGAFHAAIAAGVPIIPVCVS 180 (245)
T ss_pred HHhCCCeEEeCCCHHHHHHHHHHHHHHHHhCCCEEEEECCcc----CCCCCCC---CCccHHHHHHHHHcCCCEEEEEEE
Confidence 56789999999743 33444454 477899999999 7887765 699999999999999999999999
Q ss_pred ccccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHH
Q psy12284 75 GETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHK 154 (183)
Q Consensus 75 G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~ 154 (183)
|+.+.+.. . . .+++++++.||+||++++... ++.+++.+
T Consensus 181 g~~~~~~~-----~--------------------------------~-~~~g~i~v~~~~PI~~~~~~~---~~~~~l~~ 219 (245)
T PRK15018 181 TTSNKINL-----N--------------------------------R-LHNGLVIVEMLPPIDVSQYGK---DQVRELAA 219 (245)
T ss_pred Cccccccc-----C--------------------------------C-ccCeeEEEEEcCCCcCCCCCh---hhHHHHHH
Confidence 98775410 0 0 146899999999999887542 33444444
Q ss_pred HHHHHHHHHHHHh
Q psy12284 155 KYVDSLTQLFEDH 167 (183)
Q Consensus 155 ~~~~~l~~l~~~~ 167 (183)
++.+.+++.+++.
T Consensus 220 ~v~~~i~~~~~~l 232 (245)
T PRK15018 220 HCRSIMEQKIAEL 232 (245)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444433
No 6
>PTZ00261 acyltransferase; Provisional
Probab=99.77 E-value=2.3e-18 Score=145.13 Aligned_cols=128 Identities=13% Similarity=0.133 Sum_probs=87.9
Q ss_pred cccCCCeeecHHH------------HHH---H-HhccCCCceEEEEcCCcccccccCCC-eeEEeecCCchhhhHHHHhC
Q psy12284 3 LAFFSALSASEQS------------ITH---V-LTHSKGGRVLCLMVGGARESFKCKPG-IYEIILKSRKGFVRIALKTG 65 (183)
Q Consensus 3 l~~~G~i~v~r~~------------~~~---~-l~~l~~G~~v~IfPeG~~e~~r~~~g-~~~l~~~~r~G~~~lA~~~g 65 (183)
+..+|+|||+|++ .++ . .+.+++|.+|+|||||| |+.++ .. .+||+|++++|+++|
T Consensus 176 l~~~G~IPVdR~~~~~g~~~vdrea~~~v~~~~~e~Lk~G~sLvIFPEGT----RS~~gg~L---~pFK~GaF~LAieag 248 (355)
T PTZ00261 176 FDRVGHFPVHFKSDSDGNFEVDKEKQAQVQQAIDAHLRLGGSLAFFPEGA----INKHPQVL---QTFRYGTFATIIKHR 248 (355)
T ss_pred HHHCCCeeeecccccccccccchHHHHHHHHHHHHHHHCCCEEEEECCcC----CcCCCCcC---CCCcHHHHHHHHHcC
Confidence 5678899998731 111 2 23578999999999999 77764 34 699999999999999
Q ss_pred CCeeeEeeeccccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEcc-ceeCCCCCCC
Q psy12284 66 TPIVPVFTFGETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGA-PIEVPKVEQP 144 (183)
Q Consensus 66 ~pIVPv~i~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~-PI~~~~~~~~ 144 (183)
+||||+++.|+.++| |.+.+ +..+++++++.||+ ||++++.+..
T Consensus 249 vPIVPvai~Gs~~~w-----P~g~~------------------------------l~~~pg~I~V~iG~~PI~~~~~~~~ 293 (355)
T PTZ00261 249 MEVYYMVSVGSEKTW-----PWWMM------------------------------IGGLPADMHIRIGAYPIDYDRDSSK 293 (355)
T ss_pred CCEEEEEEeChhhcC-----CCCCc------------------------------cCCCCceEEEEECCCCCCCCCCCHH
Confidence 999999999998875 33321 11257899999999 9998764221
Q ss_pred C-----HHHHHHHHHHHHHHHHHHHHHhhcccC
Q psy12284 145 S-----NDLIAEYHKKYVDSLTQLFEDHKEKYV 172 (183)
Q Consensus 145 ~-----~e~~~~~~~~~~~~l~~l~~~~~~~~g 172 (183)
+ ++.+++..+++++++.++-|..+..-|
T Consensus 294 eL~~~lr~lmqe~~~~I~~el~~~~~~~~~~~~ 326 (355)
T PTZ00261 294 DVAVGLQQRMQKVRDEIAAEVAAAEEARRRRRG 326 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhcc
Confidence 1 223455555555555555433333333
No 7
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.72 E-value=6.1e-17 Score=129.09 Aligned_cols=114 Identities=20% Similarity=0.318 Sum_probs=85.3
Q ss_pred cccCCCeeecHHH-------HHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeec
Q psy12284 3 LAFFSALSASEQS-------ITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFG 75 (183)
Q Consensus 3 l~~~G~i~v~r~~-------~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G 75 (183)
+..+|++|+||++ ++++.+.+++|.+++|||||| ++.+++. .++++|++++|.++|+||||+++.|
T Consensus 92 ~~~~~~i~v~R~~~~~~~~~~~~~~~~l~~g~~v~IfPEGt----r~~~~~~---~~f~~G~~~lA~~~~~pIvPv~i~g 164 (214)
T PLN02901 92 MYMTGHIPLKRMDRRSQLECLKRCMELLKKGASVFFFPEGT----RSKDGKL---AAFKKGAFSVAAKTGVPVVPITLVG 164 (214)
T ss_pred HHHCCcEEEecCCcHHHHHHHHHHHHHHhCCCEEEEeCCCC----CCCCCcc---cCchhhHHHHHHHcCCCEEEEEEec
Confidence 4578999999853 344566788999999999999 6666665 6899999999999999999999999
Q ss_pred cccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHH
Q psy12284 76 ETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKK 155 (183)
Q Consensus 76 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~ 155 (183)
+++++ |.|.+ ....++++++.+|+||+.. + .+++.++
T Consensus 165 ~~~~~-----~~~~~------------------------------~~~~~~~i~v~~~~pi~~~-----~---~~~l~~~ 201 (214)
T PLN02901 165 TGKIM-----PNGKE------------------------------GILNPGSVKVVIHPPIEGS-----D---ADELCNE 201 (214)
T ss_pred chhhC-----cCCCc------------------------------ccccCCeEEEEECCCcCCC-----C---HHHHHHH
Confidence 98775 32221 1124678999999999864 2 3345666
Q ss_pred HHHHHHHHHHH
Q psy12284 156 YVDSLTQLFED 166 (183)
Q Consensus 156 ~~~~l~~l~~~ 166 (183)
+.+.|++.+++
T Consensus 202 ~~~~i~~~~~~ 212 (214)
T PLN02901 202 ARKVIAESLVQ 212 (214)
T ss_pred HHHHHHHHhhh
Confidence 66666665543
No 8
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins.
Probab=99.69 E-value=1.1e-16 Score=126.50 Aligned_cols=108 Identities=24% Similarity=0.264 Sum_probs=81.6
Q ss_pred cccCCCeeecHHH---------------HHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHH----
Q psy12284 3 LAFFSALSASEQS---------------ITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALK---- 63 (183)
Q Consensus 3 l~~~G~i~v~r~~---------------~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~---- 63 (183)
+..+|++|++|.+ ++.+.+.+++|.+++|||||+ ++.++.. .++++|+++||.+
T Consensus 72 ~~~~g~ipI~r~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGt----r~~~~~~---~~fk~G~~~lA~~a~~~ 144 (203)
T cd07992 72 LESFGAIPVYRPKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGG----SHDRPRL---LPLKAGAARMALEALEA 144 (203)
T ss_pred HHHcCceEeEcCCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCC----CCCCCCc---cCcCccHHHHHHHHHhc
Confidence 5678999999742 235556788999999999999 6655554 6899999999986
Q ss_pred --hCCCeeeEeeeccccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCC
Q psy12284 64 --TGTPIVPVFTFGETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKV 141 (183)
Q Consensus 64 --~g~pIVPv~i~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~ 141 (183)
+++|||||++.+.... ..++++++.+|+||++++.
T Consensus 145 ~~~~vpIvPv~i~~~~~~-------------------------------------------~~~~~i~i~~g~pi~~~~~ 181 (203)
T cd07992 145 GQKDVKIVPVGLNYEDKS-------------------------------------------RFRSRVLVEFGKPISVSAF 181 (203)
T ss_pred CCCCCeEEeeeEEeCCCC-------------------------------------------CCCCeEEEEECCCcccccc
Confidence 6999999999864321 0246899999999999876
Q ss_pred CCC--CHHHHHHHHHHHHHHH
Q psy12284 142 EQP--SNDLIAEYHKKYVDSL 160 (183)
Q Consensus 142 ~~~--~~e~~~~~~~~~~~~l 160 (183)
.++ +.++++.+++++.++|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~ 202 (203)
T cd07992 182 EEAEASRDVEKKLINQLEAEL 202 (203)
T ss_pred cccccchhHHHHHHHHHHHhh
Confidence 443 4566666666666554
No 9
>KOG2848|consensus
Probab=99.68 E-value=1.2e-16 Score=128.15 Aligned_cols=117 Identities=19% Similarity=0.270 Sum_probs=90.7
Q ss_pred ccCCCeeecHHHHHHHH-------hcc-CCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeec
Q psy12284 4 AFFSALSASEQSITHVL-------THS-KGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFG 75 (183)
Q Consensus 4 ~~~G~i~v~r~~~~~~l-------~~l-~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G 75 (183)
.-+|.+++||.+-++++ +.+ ++...|.|||||| |+.+|.. ++||+|++.||.++++|||||.+.+
T Consensus 133 ~L~gvvfIdR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGT----Rn~~g~l---lPFKKGAF~lAvqaqVPIVPvv~ss 205 (276)
T KOG2848|consen 133 YLSGVVFIDRSRREKAIDTLDKCAERMKKENRKVWVFPEGT----RNKEGRL---LPFKKGAFHLAVQAQVPIVPVVFSS 205 (276)
T ss_pred HHcCceEEecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCc----cCCCCcc---cccccceeeeehhcCCCEEEEEEec
Confidence 34689999997544333 333 3458999999999 7888887 8999999999999999999999999
Q ss_pred cccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHH
Q psy12284 76 ETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKK 155 (183)
Q Consensus 76 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~ 155 (183)
..++|. ++.+. | ..+.+.|.|.+||+.+. .+.++++++.++
T Consensus 206 y~~f~~----~~~k~------------------------f--------~sG~v~V~vL~pI~Teg---lT~ddv~~L~~~ 246 (276)
T KOG2848|consen 206 YGDFYS----TKEKV------------------------F--------NSGNVIVRVLPPIPTEG---LTKDDVDVLSDE 246 (276)
T ss_pred cccccc----Cccce------------------------e--------ecceEEEEEcCCCCccC---CCcccHHHHHHH
Confidence 888873 22211 1 23789999999999886 457778888888
Q ss_pred HHHHHHHHHHH
Q psy12284 156 YVDSLTQLFED 166 (183)
Q Consensus 156 ~~~~l~~l~~~ 166 (183)
.++++.+-+++
T Consensus 247 ~R~~M~~~~~e 257 (276)
T KOG2848|consen 247 CRSAMLETFKE 257 (276)
T ss_pred HHHHHHHHHHH
Confidence 88777777654
No 10
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins.
Probab=99.64 E-value=1.1e-15 Score=119.07 Aligned_cols=114 Identities=25% Similarity=0.386 Sum_probs=83.7
Q ss_pred cccCCCeeecH-------HHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeec
Q psy12284 3 LAFFSALSASE-------QSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFG 75 (183)
Q Consensus 3 l~~~G~i~v~r-------~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G 75 (183)
+...|+++++| ++++++++.+++|.+|+|||||+ ++.. .++++|+++||.++|+|||||++.+
T Consensus 67 ~~~~g~~~i~r~~~~~~~~~~~~~~~~lk~g~~v~ifpeG~----r~~~------~~~~~G~~~lA~~~~~pIvPv~i~~ 136 (189)
T cd07983 67 LERLGIRVVRGSSSRGGAAALREMLRALKDGYNIAITPDGP----RGPR------YKVKPGVILLARKSGAPIVPVAIAA 136 (189)
T ss_pred HHHhCCCEEEcCCCCcHHHHHHHHHHHHhCCCEEEEcCCCC----CCcc------eecchHHHHHHHHhCCCEEEEEEEE
Confidence 45788999965 34677788888999999999998 4332 3689999999999999999999998
Q ss_pred cccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccc-eeEEEEEccceeCCCCCCCCHHHHHHHHH
Q psy12284 76 ETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRR-HVLTTVVGAPIEVPKVEQPSNDLIAEYHK 154 (183)
Q Consensus 76 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~-~~i~i~vG~PI~~~~~~~~~~e~~~~~~~ 154 (183)
.... +.++|.+ ..+|++ ++++++||+||++++.. +.++++++.+
T Consensus 137 ~~~~------~~~~~~~---------------------------~~~p~~~~~~~v~~~~pi~~~~~~--~~~~~~~~~~ 181 (189)
T cd07983 137 SRAW------RLKSWDR---------------------------FIIPKPFSRVVIVFGEPIHVPPDA--DEEELEEYRL 181 (189)
T ss_pred EccE------eccCccc---------------------------cccCCCCcceEEEEeCCEeeCCCC--CHHHHHHHHH
Confidence 7552 1122110 023444 67999999999988533 3667777777
Q ss_pred HHHHHHH
Q psy12284 155 KYVDSLT 161 (183)
Q Consensus 155 ~~~~~l~ 161 (183)
++.++|.
T Consensus 182 ~~~~~~~ 188 (189)
T cd07983 182 ELEAALN 188 (189)
T ss_pred HHHHHhh
Confidence 7776654
No 11
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.
Probab=99.63 E-value=3.6e-16 Score=124.26 Aligned_cols=60 Identities=23% Similarity=0.306 Sum_probs=48.2
Q ss_pred HHHHHhccCCCceEEEEcCCcccccccCCC----eeEEeecCCchhhhHHHHhCCCeeeEeeecccccc
Q psy12284 16 ITHVLTHSKGGRVLCLMVGGARESFKCKPG----IYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLY 80 (183)
Q Consensus 16 ~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g----~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~ 80 (183)
++++.+.|++|.+|+|||||| |+..+ +.. ..+||+|+++||.++|+|||||++.|.+..+
T Consensus 88 ~~~~~~~L~~G~~l~IFPEGt----rs~~~~~~g~~~-~~~fk~G~~~lA~~~~~pIvPv~i~g~~~~~ 151 (210)
T cd07986 88 LREALRHLKNGGALIIFPAGR----VSTASPPFGRVS-DRPWNPFVARLARKAKAPVVPVYFSGRNSRL 151 (210)
T ss_pred HHHHHHHHhCCCEEEEECCcc----cccccccCCccc-cCCccHHHHHHHHHHCCCEEEEEEeeeCcHH
Confidence 445666788999999999999 44433 221 2589999999999999999999999987654
No 12
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.
Probab=99.55 E-value=1.7e-14 Score=110.47 Aligned_cols=63 Identities=22% Similarity=0.362 Sum_probs=49.4
Q ss_pred cccCCCeeecHHH----HHHHHhccCC--CceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeec
Q psy12284 3 LAFFSALSASEQS----ITHVLTHSKG--GRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFG 75 (183)
Q Consensus 3 l~~~G~i~v~r~~----~~~~l~~l~~--G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G 75 (183)
+.++|+|++||++ .+++.+.+++ |.+|+|||||| |+.. .++|+|++++|.++|+||+||++.+
T Consensus 66 ~~~~g~i~V~r~~~~~~~~~~~~~l~~g~~~~l~IFPEGt----R~~~------~~fk~G~~~lA~~~~~PIvPv~i~~ 134 (163)
T cd07988 66 MRWLGGIPVDRSRAGGLVEQVVEEFRRREEFVLAIAPEGT----RSKV------DKWKTGFYHIARGAGVPILLVYLDY 134 (163)
T ss_pred HHHcCCEEeEcCCcccHHHHHHHHHHhCCCcEEEEeCCCC----CCCC------cChhhHHHHHHHHcCCCEEEEEEec
Confidence 5678999999864 3344444444 46899999999 6653 2589999999999999999999974
No 13
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.53 E-value=5e-14 Score=129.56 Aligned_cols=69 Identities=20% Similarity=0.306 Sum_probs=59.5
Q ss_pred cccCCCeeecHHH---HHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeecccc
Q psy12284 3 LAFFSALSASEQS---ITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETD 78 (183)
Q Consensus 3 l~~~G~i~v~r~~---~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~ 78 (183)
+...|++|+||++ ++++++.+++|.+|+|||||| |+.+|.. .++|+|++++|.++|+|||||++.|.+.
T Consensus 71 ~~~~~~i~v~r~~~~~~~~~~~~l~~g~~~~iFPEGt----r~~~~~~---~~~k~G~~~~a~~~~~pivPv~i~g~~~ 142 (718)
T PRK08043 71 KPYIDFVPLDPTKPMAIKHLVRLVEQGRPVVIFPEGR----ITVTGSL---MKIYDGAGFVAAKSGATVIPVRIEGAEL 142 (718)
T ss_pred HHhCCEEEecCCCHHHHHHHHHHHhCCCEEEEeCCCc----cCCCCCc---cCcchHHHHHHHHCCCCEEEEEEECCcc
Confidence 4578999999875 455666788999999999999 7777765 6899999999999999999999999765
No 14
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.51 E-value=6.8e-14 Score=133.50 Aligned_cols=102 Identities=21% Similarity=0.310 Sum_probs=75.9
Q ss_pred cccCCCeeecHHHH----HHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeecccc
Q psy12284 3 LAFFSALSASEQSI----THVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETD 78 (183)
Q Consensus 3 l~~~G~i~v~r~~~----~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~ 78 (183)
++.+|+||+||++. +.+.+.+++|.+|+|||||| |+.+++. .+||+|++++|.++++|||||++.|.+.
T Consensus 484 ~~~~~~i~v~r~~~~~~~~~~~~~l~~g~~~~ifPeGt----~~~~~~~---~~~~~g~~~~a~~~~~~i~pv~~~g~~~ 556 (1146)
T PRK08633 484 FKLFGVIPISSGGSKESLEFIRKALDDGEVVCIFPEGA----ITRNGQL---NEFKRGFELIVKGTDVPIIPFYIRGLWG 556 (1146)
T ss_pred HHHCCEEEecCCChHHHHHHHHHHHhCCCEEEEECCcC----CCCCCCc---cchhHHHHHHHHHCCCCEEEEEEecccc
Confidence 56789999999653 44455688999999999999 7777765 6899999999999999999999998765
Q ss_pred ccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCC
Q psy12284 79 LYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVP 139 (183)
Q Consensus 79 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~ 139 (183)
.+... ..+.+.. +...+++.++++.||+||+..
T Consensus 557 ~~~~~--~~~~~~~--------------------------~~~~~~~~~v~v~~~~pi~~~ 589 (1146)
T PRK08633 557 SIFSR--ASGKFLW--------------------------RWPTRIPYPVTVAFGKPMPAH 589 (1146)
T ss_pred ccccc--ccccccc--------------------------cccCCCCceEEEEECCCcCcc
Confidence 43221 1111100 001234678999999999976
No 15
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.51 E-value=9.2e-14 Score=133.14 Aligned_cols=70 Identities=24% Similarity=0.245 Sum_probs=61.2
Q ss_pred cccCCCeeecHHH---HHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccc
Q psy12284 3 LAFFSALSASEQS---ITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDL 79 (183)
Q Consensus 3 l~~~G~i~v~r~~---~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~ 79 (183)
++.+|++|+||++ .+++++.+++|.+++|||||| |+.+|.. .+||+|++++|.++++||+||++.|++..
T Consensus 497 ~~~~~~~~i~r~~~~~~~~~~~~l~~g~~~~ifPeGt----r~~~~~~---~~f~~g~~~~a~~~~~~i~pv~i~g~~~~ 569 (1140)
T PRK06814 497 LKLAKALPVDPTNPMATRTLIKEVQKGEKLVIFPEGR----ITVTGSL---MKIYDGPGMIADKAGAMVVPVRIDGLQFT 569 (1140)
T ss_pred HHhcCeeecCCCChHHHHHHHHHHHCCCEEEEeCCCC----CCCCCCc---cccchHHHHHHHHCCCCEEEEEEcCcccc
Confidence 5678999999975 355667789999999999999 7888876 69999999999999999999999998764
No 16
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis. Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p
Probab=99.50 E-value=1.2e-13 Score=106.66 Aligned_cols=108 Identities=24% Similarity=0.349 Sum_probs=81.8
Q ss_pred cccCCCeeecH-------HHHHHHHhccCC-CceEEEEcCCcccccccCCC-eeEEeecCCchhhhHHHHhCCCeeeEee
Q psy12284 3 LAFFSALSASE-------QSITHVLTHSKG-GRVLCLMVGGARESFKCKPG-IYEIILKSRKGFVRIALKTGTPIVPVFT 73 (183)
Q Consensus 3 l~~~G~i~v~r-------~~~~~~l~~l~~-G~~v~IfPeG~~e~~r~~~g-~~~l~~~~r~G~~~lA~~~g~pIVPv~i 73 (183)
+.+.|+++++| +..+.+.+.+++ |..++|||||+ ++..+ .. .+++.|++++|.++++||||+++
T Consensus 70 ~~~~g~~~i~r~~~~~~~~~~~~~~~~l~~~g~~v~ifPeG~----~~~~~~~~---~~~~~g~~~la~~~~~~IvPv~i 142 (187)
T cd06551 70 FTRLGAFSVDRDSPRSAAKSLKYVARLLSKPGSVVWIFPEGT----RTRRDKRP---LQFKPGVAHLAEKAGVPIVPVAL 142 (187)
T ss_pred HhhcCeEEecCCChhhHHHHHHHHHHHHhcCCcEEEEeCCcc----cCCCCCCc---ccccchHHHHHHHcCCcEEEEEE
Confidence 34568899976 345667777888 99999999999 44333 32 58999999999999999999999
Q ss_pred eccccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHH
Q psy12284 74 FGETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYH 153 (183)
Q Consensus 74 ~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~ 153 (183)
.+.++.+ +.+.++++.+|+||.+++.. +.++++
T Consensus 143 ~~~~~~~------------------------------------------~~~~~~~i~~~~pi~~~~~~-----~~~~~~ 175 (187)
T cd06551 143 RYTFELF------------------------------------------EQFPEIFVRIGPPIPYAETA-----LGEELA 175 (187)
T ss_pred ecccccc------------------------------------------CCCCcEEEEECCCccccccc-----cHHHHH
Confidence 9775431 12468999999999998732 245667
Q ss_pred HHHHHHHHHHH
Q psy12284 154 KKYVDSLTQLF 164 (183)
Q Consensus 154 ~~~~~~l~~l~ 164 (183)
+++.+++++++
T Consensus 176 ~~~~~~~~~~~ 186 (187)
T cd06551 176 AELANRLTRLL 186 (187)
T ss_pred HHHHHHHHHhc
Confidence 77777776654
No 17
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT. Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).
Probab=99.50 E-value=1.8e-13 Score=109.89 Aligned_cols=129 Identities=16% Similarity=0.197 Sum_probs=87.9
Q ss_pred cccCCCeeecHHH-------------------HHHHHhccCCCce-EEEEcCCcccccccCCCeeEEeecCC--------
Q psy12284 3 LAFFSALSASEQS-------------------ITHVLTHSKGGRV-LCLMVGGARESFKCKPGIYEIILKSR-------- 54 (183)
Q Consensus 3 l~~~G~i~v~r~~-------------------~~~~l~~l~~G~~-v~IfPeG~~e~~r~~~g~~~l~~~~r-------- 54 (183)
+++.|++||+|+. ++.+++.|++|+. ++|||||| |++++.. .+..
T Consensus 72 ~~~~~~~pV~r~k~~~~~P~~~~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGt----R~r~~~~---g~~~p~~Fd~~~ 144 (235)
T cd07985 72 SMGRNLLCVHSKKHIDDPPELKEEKMKANLATLKEMQQLLNEGGQLIWVAPSGG----RDRPDAN---GEWYPDPFDPSA 144 (235)
T ss_pred HhhCCceeeecCcccccchhhhhhhhhccHHHHHHHHHHHHcCCeEEEEcCCCC----CCCCCCC---CCccCCccchHH
Confidence 4567888876653 3455667888866 88999999 6654432 2333
Q ss_pred -chhhhHHHHhCCC--eeeEeeeccccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEE
Q psy12284 55 -KGFVRIALKTGTP--IVPVFTFGETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTV 131 (183)
Q Consensus 55 -~G~~~lA~~~g~p--IVPv~i~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~ 131 (183)
.||.+||.++|+| |+|+++. +.++++ |.+.|.+. +| - --.+.++++.+.
T Consensus 145 ~~~~~~La~~s~~p~hi~Plai~-~ydi~P----pp~~v~~~--------ig--------e-------~r~~~f~~v~i~ 196 (235)
T cd07985 145 VEMMRLLAQKSRVPTHLYPMALL-TYDIMP----PPKQVEKE--------IG--------E-------KRAVAFTGVGLA 196 (235)
T ss_pred HHHHHHHHHhcCCCceEEeeEEE-eecccC----CCcccccc--------cc--------c-------cccccccceEEE
Confidence 4488999999999 9999999 566642 22222110 00 0 012356799999
Q ss_pred EccceeCCCCC--CC-CHHHHHHHHHHHHHHHHHHHHH
Q psy12284 132 VGAPIEVPKVE--QP-SNDLIAEYHKKYVDSLTQLFED 166 (183)
Q Consensus 132 vG~PI~~~~~~--~~-~~e~~~~~~~~~~~~l~~l~~~ 166 (183)
||+||+..+.. .. +.++.+++++.+++++.++|+.
T Consensus 197 vg~~i~~~~~~~~~~d~~e~~~~~~~~i~~~v~~~y~~ 234 (235)
T cd07985 197 VGEEIDFSAIAATHKDPEEVREAFSKAAFDSVKRLYNV 234 (235)
T ss_pred ecCCccchhhhcccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 99999988641 12 3577788999999999999864
No 18
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences.
Probab=99.47 E-value=2e-13 Score=108.50 Aligned_cols=128 Identities=12% Similarity=0.092 Sum_probs=80.7
Q ss_pred cccCCCeeecHHHH-------HHHHhccC--CCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEee
Q psy12284 3 LAFFSALSASEQSI-------THVLTHSK--GGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFT 73 (183)
Q Consensus 3 l~~~G~i~v~r~~~-------~~~l~~l~--~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i 73 (183)
+..+|++++||++. +++.+.++ +|.+|+|||||| ++..+.. .+||+|++ ++++||+||++
T Consensus 65 ~~~~g~i~v~R~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGt----rs~~~~l---~~Fk~gaf----~~~~pI~Pv~i 133 (211)
T cd07991 65 LRALGCIFVDRSEPKDRKKVVEEIKERATDPNWPPILIFPEGT----TTNGKAL---IMFKKGAF----EPGVPVQPVAI 133 (211)
T ss_pred HHhCCceEEeCCCchhHHHHHHHHHHHHhCCCCCeEEEecCcc----ccCCCEE---Eeeccccc----cCCCeeEEEEE
Confidence 45679999998753 22333444 579999999999 6766654 68999976 48999999999
Q ss_pred eccccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHH
Q psy12284 74 FGETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYH 153 (183)
Q Consensus 74 ~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~ 153 (183)
.+........ .+...+. . +.++.+. +...+..+++.+|+||+++ .+ .++.+++.
T Consensus 134 ~~~~~~~~~~-~~~~~~~-~-~~~l~~~-------------------l~~~~~~v~v~~l~pi~~~-~~---~~~~~~l~ 187 (211)
T cd07991 134 RYPNKFVDAF-WNSSGYS-S-LMYLFRL-------------------LTQPANVLEVEFLPVYTPS-EE---GEDPKEFA 187 (211)
T ss_pred EecCccCCcc-cCCCCcc-H-HHHHHHH-------------------hCCcceEEEEEECCCcccc-cC---CCCHHHHH
Confidence 9876532110 1111110 0 0001000 1124688999999999985 22 23445567
Q ss_pred HHHHHHHHHHHHHh
Q psy12284 154 KKYVDSLTQLFEDH 167 (183)
Q Consensus 154 ~~~~~~l~~l~~~~ 167 (183)
+++.++|.+.+..-
T Consensus 188 ~~v~~~i~~~l~~~ 201 (211)
T cd07991 188 NRVRLIMANKLGLP 201 (211)
T ss_pred HHHHHHHHHhcCCC
Confidence 77777777765443
No 19
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]
Probab=99.47 E-value=2.9e-13 Score=109.07 Aligned_cols=72 Identities=29% Similarity=0.547 Sum_probs=58.2
Q ss_pred cccCCCeeecHHHH-----HHHHhccCC-CceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeecc
Q psy12284 3 LAFFSALSASEQSI-----THVLTHSKG-GRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGE 76 (183)
Q Consensus 3 l~~~G~i~v~r~~~-----~~~l~~l~~-G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~ 76 (183)
+..+|+|++||++. .++.+.+++ |.+++|||||| |+.+|... .++++|++++|.++++||+|+++.|.
T Consensus 109 ~~~~~~i~v~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGt----r~~~~~~~--~~~k~g~~~~a~~~~~PivPv~i~g~ 182 (255)
T COG0204 109 LRLLGAIPVDRENPDDETLRAAVARLKAGGRSLVIFPEGT----RSRGGEEL--LPFKRGAARLALEAGVPIVPVAIVGA 182 (255)
T ss_pred HHHcCeeEecCCCCcHHHHHHHHHHHHhCCcEEEECCCcC----cCCCcccc--CCCcchHHHHHHHcCCCEEeEEEeCC
Confidence 56789999999864 344444444 79999999999 77764421 68999999999999999999999999
Q ss_pred cccc
Q psy12284 77 TDLY 80 (183)
Q Consensus 77 ~~~~ 80 (183)
...+
T Consensus 183 ~~~~ 186 (255)
T COG0204 183 EELF 186 (255)
T ss_pred cccc
Confidence 8764
No 20
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=99.41 E-value=3.7e-13 Score=106.55 Aligned_cols=66 Identities=21% Similarity=0.285 Sum_probs=54.7
Q ss_pred cccCCCeeecHHHH---------HH-HHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHh-------C
Q psy12284 3 LAFFSALSASEQSI---------TH-VLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKT-------G 65 (183)
Q Consensus 3 l~~~G~i~v~r~~~---------~~-~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~-------g 65 (183)
++.+|+++++|++. .+ +.+.+++|.+|+|||||| |+.+|+. .++|.|++++|+++ +
T Consensus 68 l~~~g~i~I~R~~~~~~~~~~~~~~~~~~~l~~g~~l~iFPEGt----rs~~g~~---~~~k~G~~~~a~~~~~~~~~~~ 140 (205)
T cd07993 68 LRRLGAFFIRRSFGKDPLYRAVLQEYVQELLKNGQPLEFFIEGT----RSRTGKL---LPPKLGLLSVVVEAYLKGSVPD 140 (205)
T ss_pred HHHCCCEEEecCCCccHHHHHHHHHHHHHHHhCCceEEEEcCCC----CCCCCCc---cchHHHHHHHHHHHHhhCCCCC
Confidence 57899999999741 11 233578899999999999 7888875 68999999999998 8
Q ss_pred CCeeeEeeec
Q psy12284 66 TPIVPVFTFG 75 (183)
Q Consensus 66 ~pIVPv~i~G 75 (183)
+|||||++.-
T Consensus 141 v~IvPV~i~Y 150 (205)
T cd07993 141 VLIVPVSISY 150 (205)
T ss_pred eEEEEeEEee
Confidence 9999999973
No 21
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins.
Probab=99.35 E-value=6.9e-12 Score=97.38 Aligned_cols=111 Identities=22% Similarity=0.361 Sum_probs=83.6
Q ss_pred cCCCeeecH-HHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEe-----ecCCchhhhHHHHhCCCeeeEeeecccc
Q psy12284 5 FFSALSASE-QSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEII-----LKSRKGFVRIALKTGTPIVPVFTFGETD 78 (183)
Q Consensus 5 ~~G~i~v~r-~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~-----~~~r~G~~~lA~~~g~pIVPv~i~G~~~ 78 (183)
..|+.++++ +.++++++.+++|..++|||||+ ++..+...+. .+++.|+++||.++|+||||+++.++.
T Consensus 68 ~~g~~~i~~~~~~~~~~~~l~~g~~v~i~pD~~----~~~~~~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~~- 142 (192)
T cd07984 68 RFGARLIPRGGGLRELIRALKKGEIVGILPDQD----PGRKGGVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRLP- 142 (192)
T ss_pred hcCCeeEcCCchHHHHHHHHhCCCEEEEEeCCC----CCCCCCEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEcC-
Confidence 468888887 46788888889999999999999 4444311110 256999999999999999999997431
Q ss_pred ccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHHHHH
Q psy12284 79 LYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVD 158 (183)
Q Consensus 79 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~ 158 (183)
++++++.|++||+... .++.+++.+++.+
T Consensus 143 ----------------------------------------------~~~~~i~~~~~i~~~~-----~~~~~~~~~~~~~ 171 (192)
T cd07984 143 ----------------------------------------------GGGYRIEFEPPLENPP-----SEDVEEDTQRLND 171 (192)
T ss_pred ----------------------------------------------CCCEEEEEeCCCCCCC-----CCCHHHHHHHHHH
Confidence 2478899999998764 2346667778888
Q ss_pred HHHHHHHHhhccc
Q psy12284 159 SLTQLFEDHKEKY 171 (183)
Q Consensus 159 ~l~~l~~~~~~~~ 171 (183)
.++++..+|-..|
T Consensus 172 ~lE~~i~~~P~qw 184 (192)
T cd07984 172 ALEAAIREHPEQW 184 (192)
T ss_pred HHHHHHHhCchhh
Confidence 8888877765555
No 22
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase.
Probab=99.29 E-value=3.5e-12 Score=92.84 Aligned_cols=64 Identities=27% Similarity=0.420 Sum_probs=53.9
Q ss_pred cccCCCeeecHHH-------HHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEee
Q psy12284 3 LAFFSALSASEQS-------ITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFT 73 (183)
Q Consensus 3 l~~~G~i~v~r~~-------~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i 73 (183)
+.+.|+++++|.+ .+++.+.+++|.+++|||||+ ++..+.. .++++|++++|.++|+|||||++
T Consensus 59 ~~~~g~~~i~r~~~~~~~~~~~~~~~~l~~g~~v~ifPeG~----~~~~~~~---~~f~~g~~~la~~~~~pvvpv~~ 129 (130)
T TIGR00530 59 LWLTGAIFIDRENIRAIATALKAAIEVLKQGRSIGVFPEGT----RSRGRDI---LPFKKGAFHIAIKAGVPILPVVL 129 (130)
T ss_pred HHHcCCEEecCCChHHHHHHHHHHHHHHhCCCEEEEeCCCC----CCCCCCC---CCcchhHHHHHHHcCCCEEeEEe
Confidence 4668999998865 555666778999999999999 5555554 68999999999999999999986
No 23
>PLN02833 glycerol acyltransferase family protein
Probab=99.26 E-value=2.8e-11 Score=103.96 Aligned_cols=123 Identities=12% Similarity=0.102 Sum_probs=74.5
Q ss_pred cccCCCeeecHHHHH---H----HHhccC--CCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEee
Q psy12284 3 LAFFSALSASEQSIT---H----VLTHSK--GGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFT 73 (183)
Q Consensus 3 l~~~G~i~v~r~~~~---~----~l~~l~--~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i 73 (183)
+...|++++||++.+ + +.++++ +|.+|+|||||| ++.++.. .+||+|++ +.|+||+||++
T Consensus 205 ~~~~g~I~VdR~~~~~~~~~~~~l~~~l~~~~G~~llIFPEGT----rs~~~~l---~~FK~Gaf----~~g~pI~PVaI 273 (376)
T PLN02833 205 LESVGCIWFNRTEAKDREVVAKKLRDHVQDPDRNPLLIFPEGT----CVNNEYT---VMFKKGAF----ELGCTVCPIAI 273 (376)
T ss_pred HHHcCcEEecCCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCcc----ccCCCcc---cccchhhH----hcCCeEEEEEE
Confidence 467899999996421 1 122233 699999999999 7776654 68999975 45999999999
Q ss_pred ecccccccc-ccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHH
Q psy12284 74 FGETDLYDQ-VPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEY 152 (183)
Q Consensus 74 ~G~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~ 152 (183)
......... +..++.++. .++.+.|. ..+..+.+.+++||+.... |+.+++
T Consensus 274 ~y~~~~~~~fW~s~~~s~~----~~l~~ll~-------------------~~~~~v~V~~LpPi~~~~~-----e~~~ef 325 (376)
T PLN02833 274 KYNKIFVDAFWNSRKQSFT----MHLLRLMT-------------------SWAVVCDVWYLEPQTLRPG-----ETPIEF 325 (376)
T ss_pred EecCcccccccCCCCccHH----HhHHHHhC-------------------CCceEEEEEECCCcCCCCC-----CCHHHH
Confidence 854321100 000111222 11211111 1247899999999987532 224445
Q ss_pred HHHHHHHHHHHH
Q psy12284 153 HKKYVDSLTQLF 164 (183)
Q Consensus 153 ~~~~~~~l~~l~ 164 (183)
.++++++|....
T Consensus 326 A~rv~~~Ia~~l 337 (376)
T PLN02833 326 AERVRDMIAKRA 337 (376)
T ss_pred HHHHHHHHHHhc
Confidence 666666665544
No 24
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.
Probab=99.25 E-value=5e-11 Score=91.84 Aligned_cols=96 Identities=24% Similarity=0.416 Sum_probs=73.1
Q ss_pred cccCCCeeecH-------HHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeec
Q psy12284 3 LAFFSALSASE-------QSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFG 75 (183)
Q Consensus 3 l~~~G~i~v~r-------~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G 75 (183)
+.+.|++++++ ++++++.+.+++|+.++|||||+ ....+.. .+++.|++++|.++++||||+++.+
T Consensus 67 ~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~g~~l~i~peg~----~~~~~~~---~~~~~g~~~lA~~~~~~Vvpv~~~~ 139 (184)
T cd07989 67 LRLLGAIPIDRGNGRSAREALREAIEALKEGESVVIFPEGT----RSRDGEL---LPFKSGAFRLAKEAGVPIVPVAISG 139 (184)
T ss_pred HHHCCeEEEecCCchhHHHHHHHHHHHHHCCCEEEEecCcc----cCCCCCc---CCCcccHHHHHHHcCCCEEeEEEeC
Confidence 34678888865 45666777788999999999999 4433444 6899999999999999999999998
Q ss_pred cccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCC
Q psy12284 76 ETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKV 141 (183)
Q Consensus 76 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~ 141 (183)
....+.+.. +...+.++++.+|+||+.+..
T Consensus 140 ~~~~~~~~~------------------------------------~~~~~~~~~i~~~~pi~~~~~ 169 (184)
T cd07989 140 TWGSLPKGK------------------------------------KLPRPGRVTVRIGEPIPPEGL 169 (184)
T ss_pred hhhhCcCCC------------------------------------CcCCCCcEEEEEcCCcChhhh
Confidence 776542110 111346799999999998863
No 25
>PRK03355 glycerol-3-phosphate acyltransferase; Validated
Probab=99.24 E-value=3.4e-11 Score=111.04 Aligned_cols=134 Identities=12% Similarity=0.055 Sum_probs=84.5
Q ss_pred ccccCCCeeecHHHH-----HHH----Hhc-cCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHH-------Hh
Q psy12284 2 QLAFFSALSASEQSI-----THV----LTH-SKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIAL-------KT 64 (183)
Q Consensus 2 ~l~~~G~i~v~r~~~-----~~~----l~~-l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~-------~~ 64 (183)
.|+.+|+++++|+.. +++ ++. +++|.++.+||||| |+++|+. .++|.|..++++ .+
T Consensus 312 llr~~Ga~fIrR~~~~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGT----RSrtGkL---l~pK~Gll~~~~~a~~~~~~~ 384 (783)
T PRK03355 312 IMRRSGMIFIRRNIGDDPLYKYVLREYVGYLVEKRFNLSWYIEGT----RSRTGKL---LPPKLGLLSYVADAYLDGRSD 384 (783)
T ss_pred HHHHcCcEEecCCCCchHHHHHHHHHHHHHHHhCCCeEEEEecCC----CCCCCCC---CcccccHHHHHHHHHHhcccC
Confidence 367899999999531 222 233 35789999999999 8999987 799999877765 57
Q ss_pred CCCeeeEeee-------ccccccccccCCCCc-hHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccce
Q psy12284 65 GTPIVPVFTF-------GETDLYDQVPNPPGS-WLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPI 136 (183)
Q Consensus 65 g~pIVPv~i~-------G~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI 136 (183)
++|||||++. |+.... ..|. ..+.-..++.+.+.. ++ -+..+++++.||+||
T Consensus 385 ~v~IVPV~I~Yd~v~E~~~y~~e-----~~G~~k~~esl~~~~~~~~~-----l~----------~~~~G~i~V~fGePi 444 (783)
T PRK03355 385 DVLLQPVSISFDQLHEIGEYAAE-----ARGGEKTPEGLRWLYNYIKA-----QG----------ERNYGKIYVRFGEPV 444 (783)
T ss_pred CCEEEEEEEEecccccchhHHHH-----hcCCCcccccHHHHHHHHHH-----hc----------cCCceeEEEEECCCC
Confidence 9999999997 332111 1110 000000000000000 00 123489999999999
Q ss_pred eCCCCCC-----------CCHHHHHHHHHHHHHHHHH
Q psy12284 137 EVPKVEQ-----------PSNDLIAEYHKKYVDSLTQ 162 (183)
Q Consensus 137 ~~~~~~~-----------~~~e~~~~~~~~~~~~l~~ 162 (183)
+..++-+ .+...++.+..++|..|.+
T Consensus 445 sl~~~~~~~~~~~~~~~~~~~~~~~~la~~Vm~~In~ 481 (783)
T PRK03355 445 SMRQYLGAPHGPLTQDPDAKRLALQKMAFEVAWRINQ 481 (783)
T ss_pred CHHHhhccccccccccchhhHHHHHHHHHHHHHHHHh
Confidence 9886411 1344577788888877765
No 26
>KOG4321|consensus
Probab=99.15 E-value=2.6e-11 Score=92.90 Aligned_cols=143 Identities=20% Similarity=0.295 Sum_probs=105.8
Q ss_pred ecHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccccccccCCCCch
Q psy12284 11 ASEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLYDQVPNPPGSW 90 (183)
Q Consensus 11 v~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~~~~~~~g~~ 90 (183)
++.+.+.+....+++|..+.|-|+|..|+...+ .-|+++|+.+-||++.|+++++||+|++..+-.+-|.++. .
T Consensus 97 vspgtvqscvsilrdgnllaispggvyeaqfgd-hyyellwrnrvgfakvaieakapiipcftqnlregfrqvg-----i 170 (279)
T KOG4321|consen 97 VSPGTVQSCVSILRDGNLLAISPGGVYEAQFGD-HYYELLWRNRVGFAKVAIEAKAPIIPCFTQNLREGFRQVG-----I 170 (279)
T ss_pred cCCccHHHHHHhhccCcEEEEcCCceeeeccch-HHHHHHHhccccceeeeeecCCCccchhHHHHHHHHHHhh-----H
Confidence 444445555555679999999999998876543 4577789999999999999999999999998888776652 3
Q ss_pred HHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHH------------HHH------
Q psy12284 91 LLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLI------------AEY------ 152 (183)
Q Consensus 91 ~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~------------~~~------ 152 (183)
++.|.+.+.++..+|+-..+|. +|.+.....|+||+.++. .++.++ .-+
T Consensus 171 frtffmrlynkvripvypiygg-----------fpvkfrtylgkpipyden--ltpqdlqikvtlgsytsiawlmrcsfn 237 (279)
T KOG4321|consen 171 FRTFFMRLYNKVRIPVYPIYGG-----------FPVKFRTYLGKPIPYDEN--LTPQDLQIKVTLGSYTSIAWLMRCSFN 237 (279)
T ss_pred HHHHHHHHhhcccceeeeccCC-----------cceeehhhcCCCCCCCCC--CChhheEEEEEecchhHHHHHHHcccc
Confidence 5567778888888876555553 478899999999998863 222221 111
Q ss_pred HHHHHHHHHHHHHHhhcccC
Q psy12284 153 HKKYVDSLTQLFEDHKEKYV 172 (183)
Q Consensus 153 ~~~~~~~l~~l~~~~~~~~g 172 (183)
.-++..++++|.++|....|
T Consensus 238 fvqvataiedlinqhqrlpg 257 (279)
T KOG4321|consen 238 FVQVATAIEDLINQHQRLPG 257 (279)
T ss_pred hhhHHHHHHHHHHHhhhCch
Confidence 13566889999999887766
No 27
>smart00563 PlsC Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.
Probab=99.09 E-value=1.5e-10 Score=82.22 Aligned_cols=66 Identities=30% Similarity=0.547 Sum_probs=52.9
Q ss_pred cccCCCeeecHHH-------HHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeec
Q psy12284 3 LAFFSALSASEQS-------ITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFG 75 (183)
Q Consensus 3 l~~~G~i~v~r~~-------~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G 75 (183)
+.+.|+++++|.. ++++++.+++|.+++|||||+ +...... .++++|++++|.++++||+|+++.+
T Consensus 45 ~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ifPeG~----~~~~~~~---~~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 45 LRLLGAIFIDRENGRLARAALREAVRLLRDGGWLLIFPEGT----RSRPGKL---LPFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred HHHCCCeEEeCCCcHHHHHHHHHHHHHHhCCCEEEEeCCcc----cCCCCCc---CCCcccHHHHHHHcCCCEEeEEEec
Confidence 4678899998653 445555677899999999999 4444432 6899999999999999999999875
No 28
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=99.08 E-value=5.9e-10 Score=103.52 Aligned_cols=70 Identities=17% Similarity=0.241 Sum_probs=55.5
Q ss_pred ccccCCCeeecHHHH-----HHHH-----hccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHh-------
Q psy12284 2 QLAFFSALSASEQSI-----THVL-----THSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKT------- 64 (183)
Q Consensus 2 ~l~~~G~i~v~r~~~-----~~~l-----~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~------- 64 (183)
.++.+|+++++|+.. .+.+ ..+++|.++.|||||| |+++|+. .++|.|++++|+++
T Consensus 337 llr~~GaffIrR~~~~~~ly~~vl~eyi~~ll~~G~~v~iFpEGt----RSrtGkl---l~pK~G~l~~a~~a~~~~~~~ 409 (799)
T TIGR03703 337 IFRRGGAFFIRRSFKGNKLYSAVFREYLHELFAKGYSVEYFVEGG----RSRTGRL---LPPKTGMLAMTLQAMLRGIRR 409 (799)
T ss_pred HHHHCCceEeecCCCcchhHHHHHHHHHHHHHhCCCEEEEEcCCC----cCCCCCc---cchHHHHHHHHHHHhhccCCC
Confidence 367899999999531 1221 2367899999999999 8999986 79999999999988
Q ss_pred CCCeeeEeeeccccc
Q psy12284 65 GTPIVPVFTFGETDL 79 (183)
Q Consensus 65 g~pIVPv~i~G~~~~ 79 (183)
+++||||++. -+++
T Consensus 410 ~v~IVPVsI~-Yekv 423 (799)
T TIGR03703 410 PITLVPVYIG-YEHV 423 (799)
T ss_pred CcEEEEEEEe-cccc
Confidence 8999999884 4443
No 29
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=99.04 E-value=3.6e-10 Score=105.09 Aligned_cols=66 Identities=18% Similarity=0.245 Sum_probs=53.3
Q ss_pred ccccCCCeeecHHHH---------HHHH-hccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhC------
Q psy12284 2 QLAFFSALSASEQSI---------THVL-THSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTG------ 65 (183)
Q Consensus 2 ~l~~~G~i~v~r~~~---------~~~l-~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g------ 65 (183)
.++.+|+++++|+.. ++.+ ..+++|.++.|||||| |+++|+. .++|.|.+.+|+++.
T Consensus 347 llr~~GaffIrR~~~~~~ly~~vl~~yi~~ll~~G~~v~iFpEGt----RSRtGkl---lppK~G~l~~a~~a~~~~~~~ 419 (818)
T PRK04974 347 IFRRGGAFFIRRSFKGNKLYSTVFREYLGELFARGYSVEYFVEGG----RSRTGRL---LQPKTGMLAMTLQAMLRGSRR 419 (818)
T ss_pred HHHHCCceEeeCCCCchHHHHHHHHHHHHHHHhCCCEEEEEcCCC----cCCCCCC---cchhhhHHHHHHHHhhcccCC
Confidence 367899999999631 1111 2357899999999999 8999986 799999999999983
Q ss_pred -CCeeeEeee
Q psy12284 66 -TPIVPVFTF 74 (183)
Q Consensus 66 -~pIVPv~i~ 74 (183)
++||||+|.
T Consensus 420 dv~IVPVsIs 429 (818)
T PRK04974 420 PITLVPVYIG 429 (818)
T ss_pred CcEEEEEEEe
Confidence 899999884
No 30
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.03 E-value=2.1e-09 Score=84.20 Aligned_cols=103 Identities=26% Similarity=0.431 Sum_probs=74.8
Q ss_pred HHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccccccccCCCCchHHHH
Q psy12284 15 SITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLYDQVPNPPGSWLLWL 94 (183)
Q Consensus 15 ~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~~~~~~~g~~~~~~ 94 (183)
+.+++++.|++|++++|-|+|. + |.. .+-..|.+-||.++|+||+||.+.-+. .+. ..+|.+
T Consensus 106 Alr~l~k~Lk~G~~i~itpDgP----k---Gp~---~~~~~Gii~LA~~sg~pi~pv~~~~sr-~~~-----lKsWDk-- 167 (214)
T COG2121 106 ALRALLKALKQGKSIAITPDGP----K---GPV---HKIGDGIIALAQKSGVPIIPVGVATSR-CWR-----LKTWDK-- 167 (214)
T ss_pred HHHHHHHHHhCCCcEEEcCCCC----C---CCc---eeccchhhHhhHhcCCCeEEEEEeeee-eee-----eccccc--
Confidence 3466777899999999999998 4 333 367899999999999999999998544 321 122221
Q ss_pred HHHHHHHcCcccccccccccccccccccccc-eeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy12284 95 QERIRRVIGVAPCIPIGRGFFQYSFGLIPRR-HVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQ 162 (183)
Q Consensus 95 ~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~-~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~ 162 (183)
..+|.| +++++++|+||.++. +.+.|++++..+++..+++.
T Consensus 168 -------------------------~~IP~PFgk~~i~~gePi~~~~--D~~~~~l~~~~~~~~~~~n~ 209 (214)
T COG2121 168 -------------------------TIIPLPFGKIKIVLGEPIEVDA--DKDKEELEEKRQEVSLALNQ 209 (214)
T ss_pred -------------------------ccccCccceeEEEecCceeecc--cccHHHHHHHHHHHHHHhhh
Confidence 256777 899999999999986 34566666655555555443
No 31
>KOG2847|consensus
Probab=99.00 E-value=6.4e-10 Score=89.30 Aligned_cols=122 Identities=17% Similarity=0.316 Sum_probs=87.6
Q ss_pred ccCCCeeecHH------HHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCC-C-eeeEeeec
Q psy12284 4 AFFSALSASEQ------SITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGT-P-IVPVFTFG 75 (183)
Q Consensus 4 ~~~G~i~v~r~------~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~-p-IVPv~i~G 75 (183)
+...|+|+.|+ ++..+++.|+.|.-|-|||||. .+..++.. ..+|-|..||-+++.. | |+|+...|
T Consensus 122 slGkclPi~RG~GvYQ~gmd~~i~kLn~g~WVHiFPEGk----V~q~~~~~--~rfKWGigRlI~ea~~~PIVlPi~h~G 195 (286)
T KOG2847|consen 122 SLGKCLPIVRGEGVYQKGMDFAIEKLNDGSWVHIFPEGK----VNQMEKEM--LRFKWGIGRLILEAPKPPIVLPIWHTG 195 (286)
T ss_pred hcCceEeeeccCccccccHHHHHHhcCCCCeEEECCCce----eeccccch--hheeccceeeeecCCCCCEEeehhhhh
Confidence 45668999996 6788999999999999999998 44334332 6899999999988875 4 58999999
Q ss_pred cccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccc-eeEEEEEccceeCCCC-------CCCCHH
Q psy12284 76 ETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRR-HVLTTVVGAPIEVPKV-------EQPSND 147 (183)
Q Consensus 76 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~-~~i~i~vG~PI~~~~~-------~~~~~e 147 (183)
.+++++. +- ...|++ ..+++.||+||..... ...+++
T Consensus 196 medi~P~-----~~------------------------------p~vp~~Gk~vtV~IG~P~~~~d~~~t~l~~~~~~p~ 240 (286)
T KOG2847|consen 196 MEDIMPE-----AP------------------------------PYVPRFGKTVTVTIGDPINFDDVEWTVLAEKVSTPK 240 (286)
T ss_pred HHHhCcc-----CC------------------------------CccCCCCCEEEEEeCCCcchhHHHHHHHhhccCCch
Confidence 9998632 20 023555 5799999999988752 112344
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy12284 148 LIAEYHKKYVDSLTQLFED 166 (183)
Q Consensus 148 ~~~~~~~~~~~~l~~l~~~ 166 (183)
..+.+++++.++.++|-++
T Consensus 241 ~~k~~td~iq~~~qdL~~~ 259 (286)
T KOG2847|consen 241 LRKALTDEIQERFQDLREQ 259 (286)
T ss_pred hhhhhhHHHHHHHHHHHHH
Confidence 4555666666666665544
No 32
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=98.99 E-value=1.1e-09 Score=97.20 Aligned_cols=68 Identities=18% Similarity=0.300 Sum_probs=50.9
Q ss_pred cccCCCeeecHHHHHH---HHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccc
Q psy12284 3 LAFFSALSASEQSITH---VLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDL 79 (183)
Q Consensus 3 l~~~G~i~v~r~~~~~---~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~ 79 (183)
+..++++++||++.+. +.+.+++| .++|||||| |++++.. .+|+.||+.+| .|||||++.|+..+
T Consensus 340 l~~i~~~~ldR~r~~~~~~~~~lL~~g-~lvIFPEGT----rs~~~~l---~~Fk~~fa~l~----~pIVPVAI~~~~~~ 407 (497)
T PLN02177 340 ISPIKAVALSREREKDAANIKRLLEEG-DLVICPEGT----TCREPFL---LRFSALFAELT----DRIVPVAINTKQSM 407 (497)
T ss_pred HHhcCEEEEeCCChHHHHHHHHHHhcC-CEEECcCcC----CCCCCCc---chHHHHHHHHC----CcEEEEEEEccccc
Confidence 4567899999965322 22345666 588999999 6766554 68999988777 59999999999988
Q ss_pred ccc
Q psy12284 80 YDQ 82 (183)
Q Consensus 80 ~~~ 82 (183)
|..
T Consensus 408 f~~ 410 (497)
T PLN02177 408 FHG 410 (497)
T ss_pred ccc
Confidence 754
No 33
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []. This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A.
Probab=98.99 E-value=1.1e-10 Score=85.06 Aligned_cols=65 Identities=25% Similarity=0.398 Sum_probs=29.5
Q ss_pred cccCCCeeecHHH-------HHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeee
Q psy12284 3 LAFFSALSASEQS-------ITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 3 l~~~G~i~v~r~~-------~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
+..+|+++++|.+ .+.+.+.+++|..|+|||||+ ++.++.. .++++|++++|.++++|||||++.
T Consensus 61 ~~~~~~i~i~r~~~~~~~~~~~~~~~~l~~~~~i~ifPEG~----~~~~~~~---~~~~~G~~~~a~~~~~~ivPv~i~ 132 (132)
T PF01553_consen 61 LRRLGFIPIDRSNRKKNRKALKDIKEILRKGGSIVIFPEGT----RSRSGEL---LPFKKGAFHIALKAKVPIVPVAIS 132 (132)
T ss_dssp HHEEEEE--CCHHHHHHHHHHHHHHHHHHC---EEE-TT-S-------B--B-------HHHHHHHHHH----------
T ss_pred hhhccceeeeeecccccchhHHHHHHHhhhcceeeecCCcc----CcCCCcc---CCccHHHHHHHHHcCCccccccCC
Confidence 4577899999932 133444567888999999999 5555444 689999999999999999999873
No 34
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=98.86 E-value=1.2e-08 Score=89.68 Aligned_cols=67 Identities=16% Similarity=0.276 Sum_probs=53.0
Q ss_pred cccCCCeeecHHH---HHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccc
Q psy12284 3 LAFFSALSASEQS---ITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDL 79 (183)
Q Consensus 3 l~~~G~i~v~r~~---~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~ 79 (183)
+...++++++|++ .+++-+.|++|. |+|||||| |++++.. ++|++||+.+| +|||||++.....+
T Consensus 327 l~~i~avrv~R~r~~d~~air~lL~~G~-lvIFPEGT----rsreg~L---lrFk~l~aela----~pVVPVAI~~~~~~ 394 (498)
T PLN02499 327 LSPIPTVRLTRIRDVDAEKIKRELARGD-LVVCPEGT----TCREPFL---LRFSALFAELT----DRIVPVAMNYRVGF 394 (498)
T ss_pred hcccCeeeecCCchhHHHHHHHHhhCCC-EEEcCCCC----CCCCCcc---cccchhhhhhc----CceEeEEEEeccce
Confidence 5578889999875 222334577888 99999999 8888765 79999999998 89999999866665
Q ss_pred cc
Q psy12284 80 YD 81 (183)
Q Consensus 80 ~~ 81 (183)
|+
T Consensus 395 f~ 396 (498)
T PLN02499 395 FH 396 (498)
T ss_pred EE
Confidence 54
No 35
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional
Probab=98.75 E-value=2e-08 Score=93.92 Aligned_cols=67 Identities=15% Similarity=0.138 Sum_probs=54.9
Q ss_pred ccccCCCeeecHHHH---------HHH-HhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHh-------
Q psy12284 2 QLAFFSALSASEQSI---------THV-LTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKT------- 64 (183)
Q Consensus 2 ~l~~~G~i~v~r~~~---------~~~-l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~------- 64 (183)
.++.+|+++++|+.- ++. ...+++|.++.+||||+ |+++|+. .+.|.|.++++.++
T Consensus 675 LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LLk~G~sVeiFpEGT----RSRTGKL---LpPK~GlLkmalda~l~g~~~ 747 (1108)
T PTZ00374 675 LMRGSGAFFMRRSFRDDPLYAALFKEYVRHLVLRRRPLEFFIEGT----RSRTGKT---MAPKLGLLKFICDTFYEGQQE 747 (1108)
T ss_pred HHHHCCeEEEeCCCCchHHHHHHHHHHHHHHHhCCCeEEEecCcC----cCCCCCc---ccchhhHHHHHHHHHhhcccC
Confidence 468899999998731 111 22367899999999999 8999986 68899999999988
Q ss_pred --CCCeeeEeeec
Q psy12284 65 --GTPIVPVFTFG 75 (183)
Q Consensus 65 --g~pIVPv~i~G 75 (183)
+++||||+|.=
T Consensus 748 v~dV~IVPVSIsY 760 (1108)
T PTZ00374 748 LDDVLIIPVSLSY 760 (1108)
T ss_pred CCCCEEEEEEEeh
Confidence 89999999973
No 36
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed
Probab=98.65 E-value=3.3e-07 Score=76.38 Aligned_cols=109 Identities=18% Similarity=0.248 Sum_probs=78.5
Q ss_pred cHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEE----eecCCchhhhHHHHhCCCeeeEeeeccccccccccCCC
Q psy12284 12 SEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEI----ILKSRKGFVRIALKTGTPIVPVFTFGETDLYDQVPNPP 87 (183)
Q Consensus 12 ~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l----~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~~~~~~~ 87 (183)
++++++++++.|++|+.|+++|+... ....|.+.- ......|.++||.++|+||||+++....
T Consensus 169 ~~~~~r~~l~~Lk~g~~v~il~Dq~~---~~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~~---------- 235 (298)
T PRK08419 169 KKGAMKELLKALKQGRALGILVDQNV---VPKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFNDD---------- 235 (298)
T ss_pred CccHHHHHHHHHHcCCeEEEEecCCC---CCCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEECC----------
Confidence 45568888898999999999997652 112333210 0267899999999999999999996321
Q ss_pred CchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q psy12284 88 GSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFEDH 167 (183)
Q Consensus 88 g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~~ 167 (183)
....++.|++||+.+..+ ...+++.+..+++.+.|+++..+|
T Consensus 236 -------------------------------------~~~~~i~~~~~i~~~~~~-~~~~~~~~~~~~~~~~lE~~Ir~~ 277 (298)
T PRK08419 236 -------------------------------------YSHFTITFFPPIRSKITD-DAEADILEATQAQASACEEMIRKK 277 (298)
T ss_pred -------------------------------------CCeEEEEEcCCccCCCCC-ChHHHHHHHHHHHHHHHHHHHHhC
Confidence 124677889999876543 235667888888888888888776
Q ss_pred hccc
Q psy12284 168 KEKY 171 (183)
Q Consensus 168 ~~~~ 171 (183)
=..|
T Consensus 278 P~Qw 281 (298)
T PRK08419 278 PDEY 281 (298)
T ss_pred chhh
Confidence 6555
No 37
>PRK14014 putative acyltransferase; Provisional
Probab=98.64 E-value=3e-07 Score=77.05 Aligned_cols=71 Identities=15% Similarity=0.130 Sum_probs=50.5
Q ss_pred ccCCCeeecHHHH-----------------HHHHhcc-CCCceEEEEcCCcccccccCCCe-------eEEeecCCchhh
Q psy12284 4 AFFSALSASEQSI-----------------THVLTHS-KGGRVLCLMVGGARESFKCKPGI-------YEIILKSRKGFV 58 (183)
Q Consensus 4 ~~~G~i~v~r~~~-----------------~~~l~~l-~~G~~v~IfPeG~~e~~r~~~g~-------~~l~~~~r~G~~ 58 (183)
..+|++.++|.+. +++.+.+ +.|.+++|||||| |..+++ +.-++.+|.|.+
T Consensus 134 ~~~~~ifi~R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGT----R~t~~k~~~~~~~~~~lL~pk~ggf 209 (301)
T PRK14014 134 WALDFPFMKRYSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGT----RFTPEKHQQQQSPYQHLLKPKAGGI 209 (301)
T ss_pred HHcCCeEEeccchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccce----ecCcccccccCCCcccccCCCCccH
Confidence 4578888888532 2223322 3478999999999 544442 222478999999
Q ss_pred hHHHHhC----CCeeeEeeecccc
Q psy12284 59 RIALKTG----TPIVPVFTFGETD 78 (183)
Q Consensus 59 ~lA~~~g----~pIVPv~i~G~~~ 78 (183)
++|+++. .+|+||.+...+.
T Consensus 210 ~~a~~~~~~~~~~I~dvti~y~~~ 233 (301)
T PRK14014 210 AFALNAMGEQFDGLLDVTIVYPDG 233 (301)
T ss_pred HHHHHhhhccCCEEEEEEEEeCCC
Confidence 9999997 7899999986653
No 38
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=98.58 E-value=1.1e-07 Score=83.86 Aligned_cols=65 Identities=18% Similarity=0.277 Sum_probs=49.4
Q ss_pred cccCCCeeecHHHHH--H-HHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccc
Q psy12284 3 LAFFSALSASEQSIT--H-VLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDL 79 (183)
Q Consensus 3 l~~~G~i~v~r~~~~--~-~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~ 79 (183)
+..+|++++||++.+ + +.+.+++|. ++|||||| |++++.. .+||.|++.+| ++||||+|.-....
T Consensus 367 L~~i~ti~VdRdr~~D~~aI~~LLk~Gd-lVIFPEGT----Rsr~g~L---lrFk~l~A~la----~~IVPVAI~~~~~~ 434 (525)
T PLN02588 367 LAPIKTVRLTRDRVKDGQAMEKLLSQGD-LVVCPEGT----TCREPYL---LRFSPLFSEVC----DVIVPVAIDSHVTF 434 (525)
T ss_pred HHhcCceeecCCCcchHHHHHHHHhCCC-EEEccCcc----ccCCCcc---cChhhhHHHhc----CceeeEEEEEeccc
Confidence 567899999998632 3 333345665 78999999 7777765 79999998887 88999999865544
No 39
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=98.42 E-value=2.1e-06 Score=71.66 Aligned_cols=107 Identities=21% Similarity=0.366 Sum_probs=76.3
Q ss_pred CeeecH---HHHHHHHhccCCCceEEEEcCCcccccccCCCeeEE----eecCCchhhhHHHHhCCCeeeEeeecccccc
Q psy12284 8 ALSASE---QSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEI----ILKSRKGFVRIALKTGTPIVPVFTFGETDLY 80 (183)
Q Consensus 8 ~i~v~r---~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l----~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~ 80 (183)
.++.++ ++++.+++.|++|+.|++.|+... ...|.+.- ......|.++||.++|+||||+++.-..+
T Consensus 161 ~i~~~~~~~~~~r~ii~~Lk~g~~v~il~Dq~~----~~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r~~~-- 234 (298)
T PRK07920 161 VLPLTGGERPPFEVLAERLRAGGVVCLLADRDL----TRSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWFEGD-- 234 (298)
T ss_pred EEecCCCCchHHHHHHHHHHcCCeEEEEeccCc----cCCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEEeCC--
Confidence 344443 578889999999999999999973 22232110 13577899999999999999999873211
Q ss_pred ccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHH
Q psy12284 81 DQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSL 160 (183)
Q Consensus 81 ~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l 160 (183)
+ ..+.+.+|++.+. .+++.+.++++.+.+
T Consensus 235 ---------------------------------------------~-y~v~~~~~~~~~~-----~~~~~~~t~~~~~~l 263 (298)
T PRK07920 235 ---------------------------------------------G-WGFRVHPPLDVPS-----AEDVAAMTQALADAF 263 (298)
T ss_pred ---------------------------------------------e-EEEEEeCCCCCCc-----hhHHHHHHHHHHHHH
Confidence 1 5577788887542 466777888888888
Q ss_pred HHHHHHhhccc
Q psy12284 161 TQLFEDHKEKY 171 (183)
Q Consensus 161 ~~l~~~~~~~~ 171 (183)
++...++=..|
T Consensus 264 E~~Ir~~PeQW 274 (298)
T PRK07920 264 AANIAAHPEDW 274 (298)
T ss_pred HHHHHhChHHH
Confidence 88877655444
No 40
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed
Probab=98.26 E-value=3.2e-06 Score=76.59 Aligned_cols=137 Identities=12% Similarity=0.006 Sum_probs=77.7
Q ss_pred ccccCCCeeecHHH---------HHH-HHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHH-------HHh
Q psy12284 2 QLAFFSALSASEQS---------ITH-VLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIA-------LKT 64 (183)
Q Consensus 2 ~l~~~G~i~v~r~~---------~~~-~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA-------~~~ 64 (183)
.|+++|++-+-|.. +++ +-..+++|.++.+||||+ ||++|+. .+.|.|...+. ...
T Consensus 160 ~lr~~GafFirRsf~~~~LY~~vl~eYi~~ll~~G~~le~F~EG~----RSRtGkl---l~Pk~GlLs~vv~~~~~~~~~ 232 (621)
T PRK11915 160 WAKRTGAIFIRRQTKDIPVYRFVLRAYAAQLVQNHVNLTWSIEGG----RTRTGKL---RPPVFGILRYITDAVDEIDGP 232 (621)
T ss_pred HHHhCCcEEeccCCCCchHHHHHHHHHHHHHHhCCCcEEEEeCCC----CCCCCCC---CCCchhhHHHHHHHHhcCCCC
Confidence 35677777776642 211 112357899999999999 8999986 56566654433 456
Q ss_pred CCCeeeEeeecccccccccc----CCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCC
Q psy12284 65 GTPIVPVFTFGETDLYDQVP----NPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPK 140 (183)
Q Consensus 65 g~pIVPv~i~G~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~ 140 (183)
+++||||+|.= ++++..-. .-.+...+....++-+.+.. +--+-+.+++.||+||+..+
T Consensus 233 dV~iVPVsI~Y-DrV~E~~~y~~El~G~~K~~Esl~~l~~~~~~----------------l~~~~G~i~V~FgePisL~~ 295 (621)
T PRK11915 233 EVYLVPTSIVY-DQLHEVEAMTTEAYGAVKRPEDLRFLVRLARQ----------------QGERLGRAYLDFGEPLPLRK 295 (621)
T ss_pred CeEEEEEEEee-cccccHHHHHHHhcCCCCCccHHHHHHHHHHH----------------HhhcCceEEEECCCCccHHH
Confidence 79999999973 23221100 00000001111111111110 00123689999999999876
Q ss_pred C-----CCCC--HHHHHHHHHHHHHHHHH
Q psy12284 141 V-----EQPS--NDLIAEYHKKYVDSLTQ 162 (183)
Q Consensus 141 ~-----~~~~--~e~~~~~~~~~~~~l~~ 162 (183)
+ ..++ ...++++..+++..|++
T Consensus 296 ~l~~~~~~~~~~~~~v~~La~~V~~~In~ 324 (621)
T PRK11915 296 RLQELRADKSGTGSEIERIALDVEHRINR 324 (621)
T ss_pred HHhhhccCcccchhHHHHHHHHHHHHHhh
Confidence 3 1122 34577777888877765
No 41
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=98.10 E-value=5.4e-05 Score=65.31 Aligned_cols=144 Identities=18% Similarity=0.213 Sum_probs=76.8
Q ss_pred cccCCCeeecHH------HHHHHHhccCC---CceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEee
Q psy12284 3 LAFFSALSASEQ------SITHVLTHSKG---GRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFT 73 (183)
Q Consensus 3 l~~~G~i~v~r~------~~~~~l~~l~~---G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i 73 (183)
+..+|.|+++|+ .++++++.+++ +..++|||||| |..++ .+.|+.++|.++|+|++.-..
T Consensus 140 ~~~~g~I~v~R~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGT----R~t~~-------~~~~s~~~A~k~glPil~~vL 208 (374)
T PLN02510 140 FHIFEFIPVERKWEVDEPNIRQMLSSFKDPRDPLWLALFPEGT----DYTEA-------KCQRSQKFAAEHGLPILNNVL 208 (374)
T ss_pred HHHcCCeeeeCCccccHHHHHHHHHHHhccCCCcEEEEeCCcC----CCCcc-------ccchHHHHHHHcCCCcceeEE
Confidence 457899999985 33444444443 46799999999 55433 357789999999999998777
Q ss_pred eccccccccccCCCCchHHHHHHHHHHHcCccccccccc-ccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHH
Q psy12284 74 FGETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGR-GFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEY 152 (183)
Q Consensus 74 ~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr-~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~ 152 (183)
.-...-+ +.-+..+...+.....++....... .++..-.| ..+..++++| +.+++++.. .++++.++.
T Consensus 209 ~PRt~Gf-------~~~l~~L~~~l~~IyDvTi~Y~~~~Ps~~~~~~g--~~p~~vhihv-rr~pi~~iP-~~~~~~~~W 277 (374)
T PLN02510 209 LPKTKGF-------VSCLQELRCSLDAVYDVTIGYKHRCPSFLDNVFG--IDPSEVHIHI-RRIPLKQIP-TSEDEVSAW 277 (374)
T ss_pred cCccccH-------HHHHHHHHHHHHhheeEEEEeCCCCCCHHHHhcC--CCCcEEEEEE-EEEECcccc-CcHHHHHHH
Confidence 4222111 0111122222334444432211111 01000001 1345566655 445555542 246667666
Q ss_pred HHHHHHHHHHHHHHhh
Q psy12284 153 HKKYVDSLTQLFEDHK 168 (183)
Q Consensus 153 ~~~~~~~l~~l~~~~~ 168 (183)
..+.-++=+++++++.
T Consensus 278 L~~~w~eKD~lL~~f~ 293 (374)
T PLN02510 278 LMDRFQLKDQLLSDFY 293 (374)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555555555555544
No 42
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.99 E-value=6.9e-05 Score=62.89 Aligned_cols=113 Identities=8% Similarity=0.043 Sum_probs=77.5
Q ss_pred eeecHHHHHHHHhccCCCceEEEEcCCccc--ccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccccccccCC
Q psy12284 9 LSASEQSITHVLTHSKGGRVLCLMVGGARE--SFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLYDQVPNP 86 (183)
Q Consensus 9 i~v~r~~~~~~l~~l~~G~~v~IfPeG~~e--~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~~~~~~ 86 (183)
++.++++++++++.+++|+.+++.++=..+ +.-+-=|+. ...-.|.++||.++|+||||+++.=..
T Consensus 187 i~~~~~~~r~l~r~Lk~g~~v~il~DQ~~~~gv~v~FFG~~---a~t~~~~a~LA~~~~apVvp~~~~R~~--------- 254 (308)
T PRK06553 187 VPSGAGAAFALAGVLERGGHVGMLVDQKFTRGVEVTFFGRP---VKTNPLLAKLARQYDCPVHGARCIRLP--------- 254 (308)
T ss_pred ccCCChHHHHHHHHHHcCCeEEEEecccCCCCceeccCCCc---CCCCchHHHHHHHHCCCEEEEEEEEcC---------
Confidence 344566788888989999999999776521 000111222 345678899999999999999996211
Q ss_pred CCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy12284 87 PGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFED 166 (183)
Q Consensus 87 ~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~ 166 (183)
.+..++.|.+|++.+..+ ..++++.+.++++.+.+++...+
T Consensus 255 --------------------------------------~g~y~i~~~~~~~~~~~~-~~~~d~~~~t~~~n~~lE~~Ir~ 295 (308)
T PRK06553 255 --------------------------------------GGRFRLELTERVELPRDA-DGQIDVQATMQALTDVVEGWVRE 295 (308)
T ss_pred --------------------------------------CCeEEEEEecCCCCCCCC-CccccHHHHHHHHHHHHHHHHHc
Confidence 124667778888866432 22456777888888888888887
Q ss_pred hhcccC
Q psy12284 167 HKEKYV 172 (183)
Q Consensus 167 ~~~~~g 172 (183)
|=..|=
T Consensus 296 ~PeQw~ 301 (308)
T PRK06553 296 YPGQWL 301 (308)
T ss_pred ChHhhc
Confidence 766663
No 43
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.96 E-value=4.2e-05 Score=64.19 Aligned_cols=65 Identities=12% Similarity=0.124 Sum_probs=47.2
Q ss_pred CCeeecHHHHHHHHhccCCCceEEEEcCCcc----cccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeee
Q psy12284 7 SALSASEQSITHVLTHSKGGRVLCLMVGGAR----ESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 7 G~i~v~r~~~~~~l~~l~~G~~v~IfPeG~~----e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
+.++.++++++++++.|++|+.|++.++=.. .+.-.-=|+. ...-.|.++||.++|+||||+++.
T Consensus 174 ~~i~~~~~~~r~ilk~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~---a~t~~g~a~LA~~~~apvvp~~~~ 242 (310)
T PRK05646 174 DSTAIEREDVRGMLKLLRAGRAIWYAPDQDYGAKQSIFVPLFGIP---AATVTATTKFARLGRARVIPFTQK 242 (310)
T ss_pred CcccccHhhHHHHHHHHhCCCeEEEeCCCCCCCCCCEEecCCCCc---chhhhHHHHHHHhhCCcEEEEEEE
Confidence 3465678889999999999999999977431 0111111222 345678999999999999999996
No 44
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria. Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane
Probab=97.96 E-value=0.0001 Score=61.22 Aligned_cols=101 Identities=28% Similarity=0.519 Sum_probs=70.7
Q ss_pred HHHHHhccCCCceEEEEcCCcccccccCC-CeeEE----eecCCchhhhHHHHhCCCeeeEeeeccccccccccCCCCch
Q psy12284 16 ITHVLTHSKGGRVLCLMVGGARESFKCKP-GIYEI----ILKSRKGFVRIALKTGTPIVPVFTFGETDLYDQVPNPPGSW 90 (183)
Q Consensus 16 ~~~~l~~l~~G~~v~IfPeG~~e~~r~~~-g~~~l----~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~~~~~~~g~~ 90 (183)
++++++.|++|+.|++.++... ... +.+.- ......|.++||.++|+||||+++.-..+
T Consensus 181 ~~~~~~~Lk~g~~v~~l~Dq~~----~~~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~r~~~------------ 244 (295)
T PF03279_consen 181 IRELIRALKEGGIVGLLGDQDP----GKKDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAYREPD------------ 244 (295)
T ss_pred HHHHHHHhccCCEEEEEECCCC----CCCCceEEeECCeecccccHHHHHHHHhCCcEEEEEEEEeCC------------
Confidence 7888899999999999999752 111 21100 14577899999999999999999973321
Q ss_pred HHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy12284 91 LLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFEDHKEK 170 (183)
Q Consensus 91 ~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~~~~~ 170 (183)
.....+.+-+|++.+. .++++++.+++.+.+++...+|=..
T Consensus 245 ----------------------------------~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~lE~~Ir~~P~Q 285 (295)
T PF03279_consen 245 ----------------------------------GSHYRIEIEPPLDFPS-----SEDIEELTQRYNDRLEEWIREHPEQ 285 (295)
T ss_pred ----------------------------------CCEEEEEEeecccCCc-----cchHHHHHHHHHHHHHHHHHcChHh
Confidence 1245666777777664 2366677888888888877766554
Q ss_pred c
Q psy12284 171 Y 171 (183)
Q Consensus 171 ~ 171 (183)
|
T Consensus 286 W 286 (295)
T PF03279_consen 286 W 286 (295)
T ss_pred h
Confidence 4
No 45
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.91 E-value=0.00012 Score=60.99 Aligned_cols=112 Identities=10% Similarity=0.120 Sum_probs=74.2
Q ss_pred eeecHHHHHHHHhccCCCceEEEEcCCccc--ccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccccccccCC
Q psy12284 9 LSASEQSITHVLTHSKGGRVLCLMVGGARE--SFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLYDQVPNP 86 (183)
Q Consensus 9 i~v~r~~~~~~l~~l~~G~~v~IfPeG~~e--~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~~~~~~ 86 (183)
++..+++++++++.+++|+.+++.|+=... +.-+-=|.. ...-+|.++||.++|+||||+++.-..
T Consensus 168 i~~~~~~~r~l~k~Lk~g~~v~il~Dq~~~~gv~v~FFG~~---a~t~~~~a~LA~~~~apvv~~~~~r~~--------- 235 (290)
T PRK06628 168 IPKGPEGSRALVRAIKESESIVMLVDQKMNDGIEVPFLGHP---AMTASAIAKIALQYKYPIIPCQIIRTK--------- 235 (290)
T ss_pred ecCCCchHHHHHHHHHcCCeEEEEecccCCCCeeeecCCCc---cccchHHHHHHHHHCCCEEEEEEEECC---------
Confidence 333456788888889999999999765410 000111222 345688999999999999999986211
Q ss_pred CCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy12284 87 PGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFED 166 (183)
Q Consensus 87 ~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~ 166 (183)
....++.+.+|++.++.++ ..+++.+.++.+-+.+++...+
T Consensus 236 --------------------------------------~~~~~i~~~~~~~~~~~~~-~~~~~~~~t~~~n~~lE~~Ir~ 276 (290)
T PRK06628 236 --------------------------------------GSYFKVIVHPQLKFEQTGD-NKADCYNIMLNINQMLGEWVKQ 276 (290)
T ss_pred --------------------------------------CCeEEEEEcCCCCCCCCCC-hhhhHHHHHHHHHHHHHHHHHc
Confidence 1235567778887654332 3455667777777888887776
Q ss_pred hhccc
Q psy12284 167 HKEKY 171 (183)
Q Consensus 167 ~~~~~ 171 (183)
|=..|
T Consensus 277 ~PeQw 281 (290)
T PRK06628 277 NPAQW 281 (290)
T ss_pred Cchhh
Confidence 65555
No 46
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase. This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis.
Probab=97.71 E-value=0.00023 Score=59.46 Aligned_cols=60 Identities=12% Similarity=0.166 Sum_probs=42.7
Q ss_pred cHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEee-----cCCchhhhHHHHhCCCeeeEeee
Q psy12284 12 SEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIIL-----KSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 12 ~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~-----~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
++++++.+++.|++|+.|++.++-.. ....|.+.-++ ..-.|.++||.++|+||+|+++.
T Consensus 174 ~~~~~r~i~~~Lk~g~~v~il~Dq~~---~~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~ 238 (303)
T TIGR02207 174 DRKDLRGMIKALKNGERIWYAPDHDY---GRKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPR 238 (303)
T ss_pred CcccHHHHHHHHhCCCeEEEeCCCCC---CCCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEE
Confidence 56668888999999999999987541 01122221111 23458999999999999999996
No 47
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated
Probab=97.66 E-value=0.00035 Score=58.76 Aligned_cols=60 Identities=15% Similarity=0.216 Sum_probs=43.0
Q ss_pred cHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEe----ecCCchhhhHHHHhCCCeeeEeee
Q psy12284 12 SEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEII----LKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 12 ~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~----~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
++++++++++.|++|+.|++.++-... ...|.+.-+ ...-+|.++||.++|+||||+++.
T Consensus 187 ~~~~~r~i~kaLk~g~~v~il~Dq~~~---~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~ 250 (314)
T PRK08943 187 REDGIKPFISSVRQGYWGYYLPDEDHG---PEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPV 250 (314)
T ss_pred CchhHHHHHHHHhCCCeEEEeCCCCCC---CCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEE
Confidence 455688899999999999999876521 122322111 233468899999999999999996
No 48
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
Probab=97.60 E-value=2.2e-05 Score=61.28 Aligned_cols=60 Identities=15% Similarity=0.057 Sum_probs=40.8
Q ss_pred cccCCCeeecHHH------HHHHHhccCC---CceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEee
Q psy12284 3 LAFFSALSASEQS------ITHVLTHSKG---GRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFT 73 (183)
Q Consensus 3 l~~~G~i~v~r~~------~~~~l~~l~~---G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i 73 (183)
+...|+++++|+. +++.++.+++ |.+++|||||| |.++++. .-+.++|.+.|+|+++-..
T Consensus 72 ~~~~~~i~v~R~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGT----r~~~~~~-------~~~~~~a~k~~~p~l~~vL 140 (193)
T cd07990 72 WQLGEFIFLKRKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGT----RFTEEKK-------ERSQEFAEKNGLPPLKHVL 140 (193)
T ss_pred HhhCeeEEEECChHHhHHHHHHHHHHHhcCCCCcEEEEeCccc----CCCHHHH-------HHHHHHHHHcCCCCcceee
Confidence 3456789999863 2334444433 89999999999 6665543 2233889999999885443
No 49
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.60 E-value=0.00024 Score=59.20 Aligned_cols=59 Identities=19% Similarity=0.206 Sum_probs=42.2
Q ss_pred HHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEe----ecCCchhhhHHHHhCCCeeeEeee
Q psy12284 13 EQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEII----LKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 13 r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~----~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
+++++++++.|++|+.+++.++=... ...|.+.-+ ...-+|.++||.++|+||||+++.
T Consensus 167 ~~~~r~~~~~Lk~g~~v~~l~Dq~~~---~~~gv~v~FFG~~a~t~~~~a~LA~~~~a~vvp~~~~ 229 (293)
T PRK06946 167 ADSARQVLRWLRDGKPVMLGADMDFG---LRDSTFVPFFGVPACTLTAVSRLARTGGAQVVPFITE 229 (293)
T ss_pred CchHHHHHHHHhCCCeEEEeCCCCCC---CCCCeEeCCCCCCcHHhHHHHHHHHhcCCeEEEEEEE
Confidence 34588899999999999999776421 122222100 244578899999999999999886
No 50
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase. This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars.
Probab=97.58 E-value=0.00055 Score=57.32 Aligned_cols=60 Identities=18% Similarity=0.187 Sum_probs=42.7
Q ss_pred cHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEe----ecCCchhhhHHHHhCCCeeeEeee
Q psy12284 12 SEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEII----LKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 12 ~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~----~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
++++++++++.|++|+.|++.++=... ...|.+.-+ ...-+|.++||.++|+||||+++.
T Consensus 178 ~~~~~r~i~~aLk~g~~v~il~Dq~~~---~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~ 241 (305)
T TIGR02208 178 REAGIKALLASLKRGESGYYLPDEDHG---PEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPG 241 (305)
T ss_pred ChhhHHHHHHHHhCCCeEEEeCCCCCC---CCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEE
Confidence 456788899999999999999776410 122222111 223467899999999999999986
No 51
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.55 E-value=0.00028 Score=59.12 Aligned_cols=60 Identities=18% Similarity=0.264 Sum_probs=42.7
Q ss_pred cHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEe----ecCCchhhhHHHHhCCCeeeEeee
Q psy12284 12 SEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEII----LKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 12 ~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~----~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
++++++++++.|++|+.+++.++=.. ....|.+.-+ ...-+|.++||.++|+||||+++.
T Consensus 180 ~~~~~r~~~kaLk~g~~v~il~Dq~~---~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~ 243 (306)
T PRK08733 180 ANEDLRATIKHLKRGGFLWYAPDQDM---RGKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFHR 243 (306)
T ss_pred CcccHHHHHHHHhCCCeEEEeCCCCC---CCCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEEE
Confidence 56678888998999999999977441 0112221000 245578899999999999999984
No 52
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.53 E-value=0.00055 Score=57.43 Aligned_cols=61 Identities=8% Similarity=0.143 Sum_probs=43.5
Q ss_pred ecHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEe-----ecCCchhhhHHHHhCCCeeeEeee
Q psy12284 11 ASEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEII-----LKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 11 v~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~-----~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
+++++++++++.|++|+.+++.++-... ...|.+.-+ ...-.|.++||.++|+||||+++.
T Consensus 179 i~~~~~r~~~k~Lk~g~~v~il~Dq~~~---~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~ 244 (309)
T PRK06860 179 LDRKDLKGMIKALKKGERIWYAPDHDYG---PRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPR 244 (309)
T ss_pred cCcccHHHHHHHHhcCCeEEEeCCCCCC---CCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEE
Confidence 3556788889999999999999876521 112222111 123568899999999999999996
No 53
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.52 E-value=0.0011 Score=58.71 Aligned_cols=107 Identities=15% Similarity=0.177 Sum_probs=71.0
Q ss_pred cHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEe----ecCCchhhhHHHHhCCCeeeEeeeccccccccccCCC
Q psy12284 12 SEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEII----LKSRKGFVRIALKTGTPIVPVFTFGETDLYDQVPNPP 87 (183)
Q Consensus 12 ~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~----~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~~~~~~~ 87 (183)
++++++++++.|++|+.+++.|+-.. ...|.+.-+ ...-.|.++||.++|+||||+++.-..
T Consensus 195 ~~~giR~liraLk~G~~vgiL~DQ~~----~~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~R~~---------- 260 (454)
T PRK05906 195 PKNGINQALRALHQGEVVGIVGDQAL----LSSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIYRKP---------- 260 (454)
T ss_pred CchHHHHHHHHHhcCCEEEEEeCCCC----CCCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEEEeC----------
Confidence 46678999999999999999988762 122221100 244678999999999999999986211
Q ss_pred CchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q psy12284 88 GSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFEDH 167 (183)
Q Consensus 88 g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~~ 167 (183)
.+ ..+.+.+|+..+.. .++.+++.+..+++.+.+++...++
T Consensus 261 -------------------------------------~g-y~v~i~~~l~~~~~-~~~~~d~~~~tq~~n~~LE~~IR~~ 301 (454)
T PRK05906 261 -------------------------------------NG-YLVVPSKKFYANKS-LPIKESTEQLMDRLMRFLEKGIACK 301 (454)
T ss_pred -------------------------------------Ce-EEEEEEcCccCccc-CCcchHHHHHHHHHHHHHHHHHHhC
Confidence 11 34555566644321 2234667777888888888877665
Q ss_pred hccc
Q psy12284 168 KEKY 171 (183)
Q Consensus 168 ~~~~ 171 (183)
=..|
T Consensus 302 PeQW 305 (454)
T PRK05906 302 PEQW 305 (454)
T ss_pred hHHh
Confidence 5554
No 54
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated
Probab=97.52 E-value=0.00034 Score=58.17 Aligned_cols=63 Identities=16% Similarity=0.135 Sum_probs=44.3
Q ss_pred eeecHHHHHHHHhccCCCceEEEEcCCccc----ccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeee
Q psy12284 9 LSASEQSITHVLTHSKGGRVLCLMVGGARE----SFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 9 i~v~r~~~~~~l~~l~~G~~v~IfPeG~~e----~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
++.++++++++++.|++|+.|++.++-... +.-.-=|.. ..+-.|.++||.++|+||||+++.
T Consensus 154 i~~~~~~~~~i~~aLk~g~~v~il~Dq~~~~~~g~~v~FfG~~---a~~~~gpa~lA~~~~apvvp~~~~ 220 (289)
T PRK08905 154 APATPQGVRMLVKALRRGEAVGILPDQVPSGGEGVWAPFFGRP---AYTMTLVARLAEVTGVPVIFVAGE 220 (289)
T ss_pred eccCCccHHHHHHHHhcCCeEEEcCCCCCCCCCceEecCCCCc---chHHHHHHHHHHhhCCcEEEEEEE
Confidence 444556788889999999999998665411 000111222 346688999999999999999986
No 55
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.50 E-value=0.0005 Score=57.07 Aligned_cols=64 Identities=11% Similarity=0.168 Sum_probs=42.7
Q ss_pred CeeecHHHHHHHHhcc-CCCceEEEEcCCcccccccCCCeeEE----eecCCchhhhHHHHhCCCeeeEeee
Q psy12284 8 ALSASEQSITHVLTHS-KGGRVLCLMVGGARESFKCKPGIYEI----ILKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 8 ~i~v~r~~~~~~l~~l-~~G~~v~IfPeG~~e~~r~~~g~~~l----~~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
.++..+++++++++.| ++|..+++.++=... ...|.+.- ....-+|.++||.++|+||||+++.
T Consensus 158 ~i~~~~~~~r~i~k~L~k~~~~v~~l~Dq~~~---~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~ 226 (289)
T PRK08706 158 FLIGRTEGLRALVKQFRKSSAPFLYLPDQDFG---RNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPV 226 (289)
T ss_pred ccccChhhHHHHHHHHHhCCceEEEeCCCCCC---CCCCEEeccCCccchhhhHHHHHHHhcCCeEEEEEEE
Confidence 3444566888888888 577777777544310 11222110 0345688999999999999999997
No 56
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.34 E-value=0.0011 Score=55.67 Aligned_cols=60 Identities=12% Similarity=0.170 Sum_probs=43.2
Q ss_pred cHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEE----eecCCchhhhHHHHhCCCeeeEeee
Q psy12284 12 SEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEI----ILKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 12 ~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l----~~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
++++++++++.|++|+.|++.++=... ...|.+.- ....-.|.++||.++|+||||+++.
T Consensus 169 ~~~~~r~li~~Lk~g~~v~~l~Dq~~~---~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~ 232 (305)
T PRK08734 169 EGPAVRQLFKVLKDGGAVGILPDQQPK---MGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCE 232 (305)
T ss_pred CchhHHHHHHHHhcCCeEEEeCCCCCC---CCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEE
Confidence 455688899999999999999765410 11222110 1345688999999999999999986
No 57
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed
Probab=97.15 E-value=0.0022 Score=53.71 Aligned_cols=65 Identities=9% Similarity=0.137 Sum_probs=44.4
Q ss_pred CCeeecHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEe-----ecCCchhhhHHHHhCCCeeeEeee
Q psy12284 7 SALSASEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEII-----LKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 7 G~i~v~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~-----~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
|.--+++++++++++.|++|+.+++.++=... ...|.+.-+ ...-.|.++||.++|+||||+++.
T Consensus 173 g~~~i~~~~~r~~~~aLk~g~~v~il~DQ~~~---~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~ 242 (305)
T PRK08025 173 NKAMIGRNNLRGIVGALKKGEAVWFAPDQDYG---PKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMV 242 (305)
T ss_pred CCcCcCcccHHHHHHHHhCCCeEEEeCCCCCC---CCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEE
Confidence 33334566788889989999999999775421 111222110 123568899999999999999986
No 58
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.08 E-value=0.0033 Score=52.95 Aligned_cols=63 Identities=19% Similarity=0.292 Sum_probs=46.0
Q ss_pred CeeecHHHHHHHHhccCCCceEEEEcCCcccccccCCCe-e-EE---eecCCchhhhHHHHhCCCeeeEeee
Q psy12284 8 ALSASEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGI-Y-EI---ILKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 8 ~i~v~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~-~-~l---~~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
.+|...+.++.+++.|++|+.|++-|+=. .+..+. + .. .-.--+|..+||.++|++|+|+++.
T Consensus 176 ~~~~~~~~ir~li~~Lk~G~~v~~lpDqd----~~~~~~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~ 243 (308)
T COG1560 176 LLPRKGEGIRQLIKALKQGEAVGYLPDQD----YGPGESVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPV 243 (308)
T ss_pred ccCCCchhHHHHHHHHhcCCeEEEecCcc----cCCCCCeEeccCCCcccccchHHHHHHHhCCCEEEEEEE
Confidence 34444478899999999999999999866 222221 1 00 0123578999999999999999997
No 59
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.02 E-value=0.0028 Score=52.79 Aligned_cols=63 Identities=11% Similarity=0.087 Sum_probs=42.7
Q ss_pred eeecHHHHHHHHhccCCCceEEEEcCCcccccccCCCeeEEe----ecCCchhhhHHHHhCCCeeeEeee
Q psy12284 9 LSASEQSITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEII----LKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 9 i~v~r~~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~----~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
++.+.++++++++.|++|+.|++.++=... ...|.+.-+ ...-+|...+|.++++||||+++.
T Consensus 165 i~~~~~~~r~l~kaLk~g~~v~il~Dq~~~---~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~ 231 (295)
T PRK05645 165 APSTKEGILSVIKEVRKGGQVGIPADPEPA---ESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHAL 231 (295)
T ss_pred eecCcccHHHHHHHHhcCCeEEEcCCCCCC---CCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEE
Confidence 343566788899999999999999765421 112221101 123346778999999999999996
No 60
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=96.97 E-value=0.013 Score=50.69 Aligned_cols=55 Identities=16% Similarity=0.147 Sum_probs=35.6
Q ss_pred cccCCCeeecHHH------HHHHHhccCC---CceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCe
Q psy12284 3 LAFFSALSASEQS------ITHVLTHSKG---GRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPI 68 (183)
Q Consensus 3 l~~~G~i~v~r~~------~~~~l~~l~~---G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pI 68 (183)
+..+|+|++||+. ++++++.+++ |..++|||||| |..+++. .-....|.+.|.|.
T Consensus 132 ~~~~~~IfIdR~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGT----R~~~~k~-------~~s~~fA~~~glP~ 195 (376)
T PLN02380 132 MWFSEYVFLERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGT----RFTQAKL-------LAAQEYAASRGLPV 195 (376)
T ss_pred HHHcCCEEecCCchhHHHHHHHHHHHHhhCCCccEEEEecCcC----CCCchhh-------HHHHHHHHHcCCCC
Confidence 3467899999873 2344455554 78899999999 6655542 11345566666554
No 61
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=96.89 E-value=0.0093 Score=55.11 Aligned_cols=59 Identities=17% Similarity=0.144 Sum_probs=42.5
Q ss_pred HHHHHHHHhccCCCceEEEEcCCccc---ccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeee
Q psy12284 13 EQSITHVLTHSKGGRVLCLMVGGARE---SFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTF 74 (183)
Q Consensus 13 r~~~~~~l~~l~~G~~v~IfPeG~~e---~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~ 74 (183)
.+.++.+++.+++|..|+|.+.-..+ +.-+.=|.. ..+-.|.++||.++|+||||+++.
T Consensus 532 ~~~~r~i~~aLk~g~~v~il~Dq~~~~~~~~v~FfG~~---a~~~~g~~~lA~~~~~pvv~~~~~ 593 (656)
T PRK15174 532 ADVVRACMQTLHSGQSLVVAIDGALNLSAPTIDFFGQQ---ITYSTFCSRLAWKMHLPTVFSVPI 593 (656)
T ss_pred chHHHHHHHHHHcCCeEEEEeCCCCCCCCceeccCCCc---cCcCcHHHHHHHHHCCCEEEeEEE
Confidence 35678888888899999999665521 111111222 356789999999999999999984
No 62
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]
Probab=95.26 E-value=0.062 Score=49.65 Aligned_cols=66 Identities=20% Similarity=0.321 Sum_probs=50.0
Q ss_pred ccccCCCeeecHH---H------HHHHH-hccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHh---C---
Q psy12284 2 QLAFFSALSASEQ---S------ITHVL-THSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKT---G--- 65 (183)
Q Consensus 2 ~l~~~G~i~v~r~---~------~~~~l-~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~---g--- 65 (183)
.+++.|++.+-|. | +++=+ +...+|.++==|-||+ ||+.|+. ++.|.|...+-+++ |
T Consensus 341 i~RR~GAfFIRRsfKgn~LYs~VfrEYl~~Lf~rgysleyfIEGG----RSRTGrl---L~PKtGmlsmtlqA~Lrg~~r 413 (810)
T COG2937 341 IFRRGGAFFIRRTFKGNPLYSTVFREYLGELFSRGYSLEYFIEGG----RSRTGRL---LPPKTGMLSMTLQAMLRGRTR 413 (810)
T ss_pred HHHhccceEEEeccCCChhHHHHHHHHHHHHHhCCcceEEEeecC----ccccCCc---CCCccchHHHHHHHHhcCCCC
Confidence 4788999999885 1 12211 2236799999999999 8999997 89999987776553 3
Q ss_pred -CCeeeEeee
Q psy12284 66 -TPIVPVFTF 74 (183)
Q Consensus 66 -~pIVPv~i~ 74 (183)
+-+|||||-
T Consensus 414 pI~lvPvyIg 423 (810)
T COG2937 414 PILLVPVYIG 423 (810)
T ss_pred CeEEEeeEee
Confidence 567999996
No 63
>PLN02349 glycerol-3-phosphate acyltransferase
Probab=94.85 E-value=0.15 Score=44.35 Aligned_cols=125 Identities=14% Similarity=0.203 Sum_probs=71.9
Q ss_pred HHHHhccCC-CceEEEEcCCcccccccCCCeeEEeecCCch----hhhHHHHhCC--CeeeEeeeccccccccccCCCCc
Q psy12284 17 THVLTHSKG-GRVLCLMVGGARESFKCKPGIYEIILKSRKG----FVRIALKTGT--PIVPVFTFGETDLYDQVPNPPGS 89 (183)
Q Consensus 17 ~~~l~~l~~-G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G----~~~lA~~~g~--pIVPv~i~G~~~~~~~~~~~~g~ 89 (183)
+.+...|++ |..+.|||+|+|.--...+|++.+ -+|-.- |=+|+.++|+ .+.|.++. +.+++ |...
T Consensus 284 k~~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~p-apFD~~svd~mR~l~~~s~~ptHfYPlAl~-~yDIm-----PPP~ 356 (426)
T PLN02349 284 KEMALLLREGGQLIWIAPSGGRDRPDPLTGEWTP-APFDPSAVDNMRRLTEKSKAPGHFYPLAML-SYDIM-----PPPP 356 (426)
T ss_pred HHHHHHHhcCCeEEEEeCCCCCCCCCccCCCccC-CCCChHHHHHHHHHHHhcCCCccccchHHH-hCccC-----CCcc
Confidence 334445667 788999999994211111234322 234433 4467888886 48999988 56664 2211
Q ss_pred hHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCCC--CCC-HHHHHHHHHHHHHHHHHHHHH
Q psy12284 90 WLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKVE--QPS-NDLIAEYHKKYVDSLTQLFED 166 (183)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~~--~~~-~e~~~~~~~~~~~~l~~l~~~ 166 (183)
-+ .+-+|= - -.-.-+++-+.||+-|+.++.. ..+ .|..+.+++.+.+.+.++|+.
T Consensus 357 ~V-------EkeIGE------~---------R~v~F~gvGlsvg~EI~~~~~~~~~~~~~e~r~~~t~~~~~~V~~~Y~~ 414 (426)
T PLN02349 357 QV-------EKEIGE------R---------RLVGFTGVGLSVGEEIDFSDITAACEGGAEAREAFTQAAYASVVEQYAV 414 (426)
T ss_pred cc-------ccccCc------e---------eeeeeecceeeeccccchHhhhhhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 11 111110 0 0012256788889999986541 123 355677888888999999976
Q ss_pred hhcc
Q psy12284 167 HKEK 170 (183)
Q Consensus 167 ~~~~ 170 (183)
.+..
T Consensus 415 L~~a 418 (426)
T PLN02349 415 LKSA 418 (426)
T ss_pred HHHh
Confidence 5443
No 64
>KOG3730|consensus
Probab=93.52 E-value=0.33 Score=43.16 Aligned_cols=116 Identities=17% Similarity=0.148 Sum_probs=69.5
Q ss_pred cccCCCeeecHH-------------HHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHh-----
Q psy12284 3 LAFFSALSASEQ-------------SITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKT----- 64 (183)
Q Consensus 3 l~~~G~i~v~r~-------------~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~----- 64 (183)
|+..|++...|. -+...+. .....|=.|-||| |++.++. +-.|-|...++++-
T Consensus 197 LR~sGAFFMRRsFg~d~LYWaVFsEYv~t~v~--N~~~~VEFFiEgT----RSR~~K~---L~PK~GlL~mvlePyf~ge 267 (685)
T KOG3730|consen 197 LRKSGAFFMRRSFGNDELYWAVFSEYVYTLVA--NYHIGVEFFIEGT----RSRNFKA---LVPKIGLLSMVLEPYFTGE 267 (685)
T ss_pred HHhcccceeeeccCCceehHHHHHHHHHHHHh--cCCCceEEEEeec----ccccccc---cCcchhhHHHHHhhhhcCC
Confidence 566777777664 1122332 2335688999999 8888876 67899999999872
Q ss_pred --CCCeeeEeeeccccccccccCCCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCC
Q psy12284 65 --GTPIVPVFTFGETDLYDQVPNPPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPK 140 (183)
Q Consensus 65 --g~pIVPv~i~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~ 140 (183)
.+-||||++.- ++++ .=+-..+..+|+|=|---..|++.+..-+--+-+.+.+.||+||++.+
T Consensus 268 V~Dv~iVPVSv~Y-dkIL------------EE~LyvYELLGvPKPKEST~gllKArkil~e~fGs~fl~FGePISvr~ 332 (685)
T KOG3730|consen 268 VPDVMIVPVSVAY-DKIL------------EEQLYVYELLGVPKPKESTKGLLKARKILDERFGSMFLDFGEPISVRE 332 (685)
T ss_pred cCceEEEEeeecH-HHHH------------HHHHHHHHHhCCCCcccchhHHHHHHHHHHhhcCcEEEecCCCccHHH
Confidence 36799999862 2221 112234566777543222222221100001133789999999998754
No 65
>KOG1505|consensus
Probab=88.04 E-value=5.4 Score=34.30 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=22.7
Q ss_pred ccCCCeeecHH------HHHHHHhc---cCCCceEEEEcCCcc
Q psy12284 4 AFFSALSASEQ------SITHVLTH---SKGGRVLCLMVGGAR 37 (183)
Q Consensus 4 ~~~G~i~v~r~------~~~~~l~~---l~~G~~v~IfPeG~~ 37 (183)
...|.|.++|+ .+.+.+++ ..+-..+++|||||+
T Consensus 120 ~~~~fiFl~R~~~~d~~~l~~~~k~l~~~~~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 120 WFHGFIFLERNWEKDEKTLISLLKHLKDSPDPYWLLLFPEGTR 162 (346)
T ss_pred eecceEEEecchhhhHHHHHHHHHHhccCCCceEEEEecCCCc
Confidence 45677888875 23344443 344578999999994
No 66
>COG3176 Putative hemolysin [General function prediction only]
Probab=87.55 E-value=0.42 Score=40.01 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=45.2
Q ss_pred HhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccccccc
Q psy12284 20 LTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLYDQV 83 (183)
Q Consensus 20 l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~~~ 83 (183)
.+.+++|.+|++||.|--+... .|.+.- ..++.-+..++.+++++++|+++.|.+...+.+
T Consensus 150 ~~~yr~g~tl~lfwaG~~ay~~--~g~~~~-~~gcaS~~~~~~~~~a~~~p~~~~~r~~~~f~~ 210 (292)
T COG3176 150 HREYREGRTLLLFWAGLVAYLD--KGRLDD-MPGCASVPGLPRKHGAALAPVHHNGRNSALFYL 210 (292)
T ss_pred HHHHhcCCEEEEeccchhHHhh--ccCccc-CccccccccchhhcccccchhheecccCCchhh
Confidence 3357899999999999754322 244321 467777888999999999999999887765433
No 67
>KOG3729|consensus
Probab=78.65 E-value=2.8 Score=38.03 Aligned_cols=66 Identities=20% Similarity=0.276 Sum_probs=47.9
Q ss_pred ccccCCCeeecHH----------HH-HHHH-----hccCCCceEEEEcCCcccccccCCCeeEEeecCCchh---hhHHH
Q psy12284 2 QLAFFSALSASEQ----------SI-THVL-----THSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGF---VRIAL 62 (183)
Q Consensus 2 ~l~~~G~i~v~r~----------~~-~~~l-----~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~---~~lA~ 62 (183)
.|+.+|++.+.|. .. +++| +.|++|..+=+|-||| |++.|+. +-.|.|. +-=|.
T Consensus 203 Llr~LGaFFIrRriDp~~~G~KDVLYRA~LH~yi~~~L~Q~~~iEfFlEGt----RsR~GK~---~~pk~GlLSVvV~a~ 275 (715)
T KOG3729|consen 203 LLRALGAFFIRRRVDPDDEGGKDVLYRAILHSYIEQVLSQDMPIEFFLEGT----RSRFGKA---LTPKNGLLSVVVEAV 275 (715)
T ss_pred HHHhcchheeeeccCCCcccchhHHHHHHHHHHHHHHHhCCCceEEEEecc----ccccCCc---CCcccccHHHHHHHH
Confidence 3677888887764 11 2222 2468999999999999 8999987 5567885 44567
Q ss_pred HhC----CCeeeEeee
Q psy12284 63 KTG----TPIVPVFTF 74 (183)
Q Consensus 63 ~~g----~pIVPv~i~ 74 (183)
.+| +=+|||.+.
T Consensus 276 ~~g~IPD~LlvPVs~~ 291 (715)
T KOG3729|consen 276 QHGFIPDCLLVPVSYT 291 (715)
T ss_pred hcCCCCceEEEeeecc
Confidence 777 468999986
No 68
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=74.34 E-value=3.2 Score=27.49 Aligned_cols=23 Identities=22% Similarity=0.410 Sum_probs=19.4
Q ss_pred HHHHHHhccCCCceEEEEcCCcc
Q psy12284 15 SITHVLTHSKGGRVLCLMVGGAR 37 (183)
Q Consensus 15 ~~~~~l~~l~~G~~v~IfPeG~~ 37 (183)
+++++++.+++|.+++|-|+|.+
T Consensus 48 Alr~~~~~lk~G~~~~itpDGPr 70 (74)
T PF04028_consen 48 ALREMLRALKEGYSIAITPDGPR 70 (74)
T ss_pred HHHHHHHHHHCCCeEEEeCCCCC
Confidence 45677778899999999999983
No 69
>COG4365 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.42 E-value=7.7 Score=34.24 Aligned_cols=55 Identities=18% Similarity=0.224 Sum_probs=34.6
Q ss_pred HHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchh--hhHHH----HhCCCeeeEeeeccc
Q psy12284 17 THVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGF--VRIAL----KTGTPIVPVFTFGET 77 (183)
Q Consensus 17 ~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~--~~lA~----~~g~pIVPv~i~G~~ 77 (183)
...+++|+++.|.+|.=|-.++.+ .|.. ...++++ +-||. +.++|||||+-...+
T Consensus 72 e~~iekLkdp~S~vVvgGQQAGLl---tGPl---YTihKi~siilLAreqede~~vpVVpVfWvAge 132 (537)
T COG4365 72 EALIEKLKDPESRVVVGGQQAGLL---TGPL---YTIHKIASIILLAREQEDELDVPVVPVFWVAGE 132 (537)
T ss_pred HHHHHHhcCCCceEEecccccccc---cCch---HHHHHHHHHHHhhHhhhhhhCCCeeEEEEeccC
Confidence 345667889988766544443332 2332 3566664 66776 468999999976444
No 70
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=61.99 E-value=14 Score=27.61 Aligned_cols=53 Identities=23% Similarity=0.377 Sum_probs=38.6
Q ss_pred eEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCceEE
Q psy12284 127 VLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFEDHKEKYVDDPKTAKLVI 182 (183)
Q Consensus 127 ~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~~~~~~g~~~~~~~l~~ 182 (183)
.+.|.+-+|=...+.. ++.+.-+..+++++++|.+.+.+....| .|++++|+|
T Consensus 3 ~V~V~w~dP~~ftD~~-~s~~~~~~~~~~~~~~L~~~~~~la~~~--Lp~gq~L~v 55 (141)
T PF11454_consen 3 EVKVTWQDPEKFTDIR-PSNGSQSRYRERVFAQLTKHFQKLAAKY--LPPGQTLEV 55 (141)
T ss_pred eeEEEecCcccccccc-cCCCcccccHHHHHHHHHHHHHHHHHhh--CCCCCEEEE
Confidence 4667777777666543 3444556678888888888888877776 578899987
No 71
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=48.57 E-value=35 Score=27.79 Aligned_cols=56 Identities=20% Similarity=0.274 Sum_probs=39.7
Q ss_pred HHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeeccccccc
Q psy12284 15 SITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLYD 81 (183)
Q Consensus 15 ~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~~ 81 (183)
+.+++.+++++| -|+||=+|| ..|+- .--+.++..|.+.++.++=.+-.+-+-+|.
T Consensus 114 ~~~~A~~~l~~g-rVvIf~gGt-----g~P~f-----TTDt~AALrA~ei~ad~ll~atn~VDGVY~ 169 (238)
T COG0528 114 SRREAIRHLEKG-RVVIFGGGT-----GNPGF-----TTDTAAALRAEEIEADVLLKATNKVDGVYD 169 (238)
T ss_pred CHHHHHHHHHcC-CEEEEeCCC-----CCCCC-----chHHHHHHHHHHhCCcEEEEeccCCCceeC
Confidence 444555555556 489999998 34442 334778999999999998887765666664
No 72
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=47.48 E-value=25 Score=25.24 Aligned_cols=53 Identities=9% Similarity=0.137 Sum_probs=35.3
Q ss_pred ccccccceeEEEEEc------cceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy12284 119 FGLIPRRHVLTTVVG------APIEVPKVEQPSNDLIAEYHKKYVDSLTQLFEDHKEKY 171 (183)
Q Consensus 119 ~~~lP~~~~i~i~vG------~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~~~~~~ 171 (183)
|+..+.+.|..+.|- ..+.--...+.|+++.+++.+++...|++.+.+|...+
T Consensus 24 ~~v~~~~~P~iV~fdmk~tld~F~~q~~~~~lte~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 24 YGIVRLNSPVTVAFDMKQTLDAFFDSASQKKLSEAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHhhhcCCCeEEEEecHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 445566677666551 11211112467899999999999999999888876544
No 73
>PF12652 CotJB: CotJB protein; InterPro: IPR024207 The cotJ operon proteins affect spore coat composition, and is controlled by sigma E. The genes, which include CotJB, are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat []. CotJB has been identified as a spore coat protein [].
Probab=45.05 E-value=43 Score=22.38 Aligned_cols=29 Identities=24% Similarity=0.434 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcccC
Q psy12284 144 PSNDLIAEYHKKYVDSLTQLFEDHKEKYV 172 (183)
Q Consensus 144 ~~~e~~~~~~~~~~~~l~~l~~~~~~~~g 172 (183)
|+.++.-+..+++.+...++.++|...||
T Consensus 26 P~d~~Al~~y~~~~~~~~~l~~~Ye~~yG 54 (78)
T PF12652_consen 26 PDDQEALEYYNEYSKQRKQLKKEYEKRYG 54 (78)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44455556778888999999999999998
No 74
>PF13276 HTH_21: HTH-like domain
Probab=43.13 E-value=19 Score=22.16 Aligned_cols=22 Identities=14% Similarity=0.327 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHhhcccCCCC
Q psy12284 153 HKKYVDSLTQLFEDHKEKYVDDP 175 (183)
Q Consensus 153 ~~~~~~~l~~l~~~~~~~~g~~~ 175 (183)
.+++.+.|.+++++++..|| +.
T Consensus 3 ~~~l~~~I~~i~~~~~~~yG-~r 24 (60)
T PF13276_consen 3 DEALRELIKEIFKESKPTYG-YR 24 (60)
T ss_pred hHHHHHHHHHHHHHcCCCee-hh
Confidence 35677889999999999999 64
No 75
>COG3411 Ferredoxin [Energy production and conversion]
Probab=41.34 E-value=28 Score=22.44 Aligned_cols=26 Identities=19% Similarity=0.317 Sum_probs=18.9
Q ss_pred CeeecHHHHHHHHhccCCCceEEEEcCCc
Q psy12284 8 ALSASEQSITHVLTHSKGGRVLCLMVGGA 36 (183)
Q Consensus 8 ~i~v~r~~~~~~l~~l~~G~~v~IfPeG~ 36 (183)
-|-++|.++-.+- +.|-.|+++|||.
T Consensus 2 ~i~~t~tgCl~~C---~~gPvl~vYpegv 27 (64)
T COG3411 2 SIRVTRTGCLGVC---QDGPVLVVYPEGV 27 (64)
T ss_pred ceEEeecchhhhh---ccCCEEEEecCCe
Confidence 3556666664444 5799999999996
No 76
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=39.05 E-value=1.8e+02 Score=23.60 Aligned_cols=47 Identities=15% Similarity=0.109 Sum_probs=32.2
Q ss_pred eeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHH----HHhhcccC
Q psy12284 126 HVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLF----EDHKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~----~~~~~~~g 172 (183)
.++.+.+=++-.+-....+|.++++++|+.+++.+.+.+ +..+-.||
T Consensus 155 ~~~iIAYEPvWAIGtG~~as~~~~~ev~~~ir~~l~~~~~~~~~~~~IlYG 205 (242)
T cd00311 155 APVVIAYEPVWAIGTGKTASPEQAQEVHAFIRKLLAELYGEVAEKVRILYG 205 (242)
T ss_pred cCeEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcccccCceeEEEC
Confidence 356565533334433345689999999999999999887 34566776
No 77
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=38.09 E-value=25 Score=26.21 Aligned_cols=20 Identities=35% Similarity=0.806 Sum_probs=16.8
Q ss_pred hhHHHHhCCCeeeEeeeccc
Q psy12284 58 VRIALKTGTPIVPVFTFGET 77 (183)
Q Consensus 58 ~~lA~~~g~pIVPv~i~G~~ 77 (183)
...|.+.+.||+|||++...
T Consensus 17 L~~A~~~~~~v~~vfv~d~~ 36 (165)
T PF00875_consen 17 LHAAAQNGDPVLPVFVFDPE 36 (165)
T ss_dssp HHHHHHTTSEEEEEEEE-HH
T ss_pred HHHHHHcCCCeEEEEEeccc
Confidence 55789999999999999776
No 78
>PLN02429 triosephosphate isomerase
Probab=36.74 E-value=2.7e+02 Score=23.73 Aligned_cols=47 Identities=11% Similarity=0.014 Sum_probs=31.2
Q ss_pred eeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-----hhcccC
Q psy12284 126 HVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFED-----HKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~-----~~~~~g 172 (183)
.++.|.+=++-.+-....++.++++++|+.+++.|.+++.+ .+-.||
T Consensus 218 ~~ivIAYEPvWAIGTGk~as~e~~~~v~~~IR~~l~~~~~~~va~~irILYG 269 (315)
T PLN02429 218 DNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYG 269 (315)
T ss_pred cceEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccCceEEEc
Confidence 34555553333333334578999999999999999887643 466676
No 79
>PTZ00333 triosephosphate isomerase; Provisional
Probab=33.96 E-value=2.6e+02 Score=22.86 Aligned_cols=46 Identities=9% Similarity=-0.008 Sum_probs=31.7
Q ss_pred eEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHH-----HhhcccC
Q psy12284 127 VLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFE-----DHKEKYV 172 (183)
Q Consensus 127 ~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~-----~~~~~~g 172 (183)
++.+.+=++-.+-....++.|+++++|+.+++.+.+++. ..+-.||
T Consensus 163 ~iiIAYEPvWAIGtg~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~~~ILYG 213 (255)
T PTZ00333 163 NIVIAYEPVWAIGTGKVATPEQAQEVHAFIRKWLAEKVGADVAEATRIIYG 213 (255)
T ss_pred eEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhcccccccceEEEc
Confidence 455555333344333446899999999999999998874 3566776
No 80
>KOG2898|consensus
Probab=31.14 E-value=62 Score=27.99 Aligned_cols=44 Identities=23% Similarity=0.292 Sum_probs=29.4
Q ss_pred ceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeecccccc
Q psy12284 27 RVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLY 80 (183)
Q Consensus 27 ~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~ 80 (183)
.-+++||||| +-.+.....++. +|- .+.|.-|-|+++.-...+.
T Consensus 212 ~~ii~fpegt-----Cinn~~~~~fk~-k~~----~e~~~~i~pvaik~~~~~~ 255 (354)
T KOG2898|consen 212 EPILLFPEGT-----CINNTKVMQFKL-KGS----FEEGVKIYPVAIKYDPRFG 255 (354)
T ss_pred CcEEEeecce-----eeCCceeEEEec-CCC----hhhcceeeeeeeecCcccc
Confidence 4899999998 333333323343 443 5788999999998666543
No 81
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=30.83 E-value=1.1e+02 Score=21.81 Aligned_cols=31 Identities=3% Similarity=0.196 Sum_probs=25.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhcccC
Q psy12284 142 EQPSNDLIAEYHKKYVDSLTQLFEDHKEKYV 172 (183)
Q Consensus 142 ~~~~~e~~~~~~~~~~~~l~~l~~~~~~~~g 172 (183)
.+.++++.+...++++.+|++-+.+|...++
T Consensus 52 ~~lt~~q~~a~t~~F~~aL~~~L~~~~~~h~ 82 (111)
T PF09677_consen 52 SSLTPEQVEALTQRFMQALEASLAEYQAEHH 82 (111)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4567999999999999999999988766554
No 82
>PLN02561 triosephosphate isomerase
Probab=29.89 E-value=3.1e+02 Score=22.45 Aligned_cols=47 Identities=9% Similarity=-0.009 Sum_probs=31.1
Q ss_pred eeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHH-----HhhcccC
Q psy12284 126 HVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFE-----DHKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~-----~~~~~~g 172 (183)
.++.+.+=++-.+-....++.++++++|+.+++.|.+++. ..+-.||
T Consensus 159 ~~iiIAYEPvWAIGtG~~as~~~~~~v~~~Ir~~l~~~~~~~~a~~i~ILYG 210 (253)
T PLN02561 159 ANVVLAYEPVWAIGTGKVATPAQAQEVHDELRKWLHKNVSPEVAATTRIIYG 210 (253)
T ss_pred cceEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhcccccccceEEEe
Confidence 4555655333333333456899999999999999888774 2456666
No 83
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=29.61 E-value=1.1e+02 Score=22.34 Aligned_cols=35 Identities=14% Similarity=0.312 Sum_probs=23.7
Q ss_pred eeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHH
Q psy12284 126 HVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSL 160 (183)
Q Consensus 126 ~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l 160 (183)
..-.++||-|+..++...+..+.++++.+++.+.+
T Consensus 51 ~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~ 85 (135)
T PF03652_consen 51 QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRF 85 (135)
T ss_dssp CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhc
Confidence 45689999999998766566666665555555443
No 84
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=29.56 E-value=65 Score=26.40 Aligned_cols=50 Identities=12% Similarity=0.053 Sum_probs=35.5
Q ss_pred HHHHhccCCCceEEEEcCCcccccccCCCeeEEee-cCCchhhhHHHHhCCCeeeEeeeccc
Q psy12284 17 THVLTHSKGGRVLCLMVGGARESFKCKPGIYEIIL-KSRKGFVRIALKTGTPIVPVFTFGET 77 (183)
Q Consensus 17 ~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~-~~r~G~~~lA~~~g~pIVPv~i~G~~ 77 (183)
+++++.+.+.+-|+.|=.|+ +. + + .+-.=.-.+|.++|.+|+||++.|..
T Consensus 135 ~~~i~~la~~~GL~fFy~s~-----Cp---~---C~~~aPil~~fa~~yg~~v~~VS~DG~~ 185 (248)
T PRK13703 135 RQAIAKLAEHYGLMFFYRGQ-----DP---I---DGQLAQVINDFRDTYGLSVIPVSVDGVI 185 (248)
T ss_pred HHHHHHHHhcceEEEEECCC-----Cc---h---hHHHHHHHHHHHHHhCCeEEEEecCCCC
Confidence 34666676778899999887 22 2 2 22233456899999999999999854
No 85
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=29.19 E-value=1.2e+02 Score=22.36 Aligned_cols=29 Identities=14% Similarity=0.162 Sum_probs=24.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy12284 143 QPSNDLIAEYHKKYVDSLTQLFEDHKEKY 171 (183)
Q Consensus 143 ~~~~e~~~~~~~~~~~~l~~l~~~~~~~~ 171 (183)
+.++++.+.+.+++.++|++.+++|....
T Consensus 67 ~lte~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 67 QLSEAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56789999999999999999998887544
No 86
>PF15209 IL31: Interleukin 31
Probab=28.97 E-value=1.2e+02 Score=22.47 Aligned_cols=35 Identities=14% Similarity=0.131 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hcccCCCCCCCceE
Q psy12284 146 NDLIAEYHKKYVDSLTQLFEDH-KEKYVDDPKTAKLV 181 (183)
Q Consensus 146 ~e~~~~~~~~~~~~l~~l~~~~-~~~~g~~~~~~~l~ 181 (183)
.++++.+.+++...=.+|++.| +...| +|+++..+
T Consensus 12 ~~d~kkIi~eLq~~Sk~Lledy~~kE~G-vp~~~~~~ 47 (137)
T PF15209_consen 12 KSDIKKIIEELQALSKKLLEDYKEKEKG-VPESESYQ 47 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCcccCcc
Confidence 4578888888888888999988 55678 88877654
No 87
>COG3741 HutG N-formylglutamate amidohydrolase [Amino acid transport and metabolism]
Probab=26.99 E-value=81 Score=26.18 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=34.7
Q ss_pred eEEEEEccceeCCCCCCCCHHH----HHHHHHHHHHHHHHHHHHhhcccC
Q psy12284 127 VLTTVVGAPIEVPKVEQPSNDL----IAEYHKKYVDSLTQLFEDHKEKYV 172 (183)
Q Consensus 127 ~i~i~vG~PI~~~~~~~~~~e~----~~~~~~~~~~~l~~l~~~~~~~~g 172 (183)
+++...|+|+..... .++.++ ++.+++=|-++|++++++-+..+|
T Consensus 97 ~~~~fdge~l~~~g~-~~~~~e~~~Rle~~~~PYHaaL~~el~r~~a~~G 145 (272)
T COG3741 97 PVTTFDGEPLYIYGG-APTPAEALARLETLWKPYHAALRRELERLRAIFG 145 (272)
T ss_pred ccccccCccccccCC-CCCHHHHHHHHHHhhccHHHHHHHHHHHHHhhcC
Confidence 567788999998764 355444 566777777999999999999998
No 88
>PF13728 TraF: F plasmid transfer operon protein
Probab=26.74 E-value=1.2e+02 Score=23.96 Aligned_cols=50 Identities=20% Similarity=0.252 Sum_probs=36.4
Q ss_pred HHHHhccCCCceEEEEcCCcccccccCCCeeEEee-cCCchhhhHHHHhCCCeeeEeeeccc
Q psy12284 17 THVLTHSKGGRVLCLMVGGARESFKCKPGIYEIIL-KSRKGFVRIALKTGTPIVPVFTFGET 77 (183)
Q Consensus 17 ~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~-~~r~G~~~lA~~~g~pIVPv~i~G~~ 77 (183)
+++++.+.+...|++|-.|+ +. + + .+..=.-.+|.++|..|+||.+.|..
T Consensus 112 ~~~l~~la~~~gL~~F~~~~-----C~---~---C~~~~pil~~~~~~yg~~v~~vs~DG~~ 162 (215)
T PF13728_consen 112 DKALKQLAQKYGLFFFYRSD-----CP---Y---CQQQAPILQQFADKYGFSVIPVSLDGRP 162 (215)
T ss_pred HHHHHHHhhCeEEEEEEcCC-----Cc---h---hHHHHHHHHHHHHHhCCEEEEEecCCCC
Confidence 34666677888899999997 22 2 2 23333456899999999999998863
No 89
>PF13865 FoP_duplication: C-terminal duplication domain of Friend of PRMT1
Probab=26.18 E-value=1.4e+02 Score=19.55 Aligned_cols=27 Identities=11% Similarity=0.181 Sum_probs=16.5
Q ss_pred CCHHHHHHHHHHHHHH----HHHHHHHhhcc
Q psy12284 144 PSNDLIAEYHKKYVDS----LTQLFEDHKEK 170 (183)
Q Consensus 144 ~~~e~~~~~~~~~~~~----l~~l~~~~~~~ 170 (183)
.|.|++|+-.+.||+. |.+-++.|...
T Consensus 40 kT~EeLDaELD~Ym~~~~~~LD~~Ld~Y~~~ 70 (74)
T PF13865_consen 40 KTAEELDAELDAYMSKTKSKLDAELDSYMSK 70 (74)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4677777777777754 44455555443
No 90
>COG4764 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.99 E-value=11 Score=28.90 Aligned_cols=32 Identities=16% Similarity=0.208 Sum_probs=22.2
Q ss_pred ecCCchhhhHHHHhCCCe-eeEeeecccccccc
Q psy12284 51 LKSRKGFVRIALKTGTPI-VPVFTFGETDLYDQ 82 (183)
Q Consensus 51 ~~~r~G~~~lA~~~g~pI-VPv~i~G~~~~~~~ 82 (183)
-.++..+.+.-.+.|+|| |+++..-++..|..
T Consensus 42 nnW~~aA~~~er~~GvPVpVlMAtiy~ESgFk~ 74 (197)
T COG4764 42 NNWQRAALRTEREYGVPVPVLMATIYTESGFKH 74 (197)
T ss_pred hHHHHHHHHHHHHhCCCchHHHHHHHHhhcCCC
Confidence 467788888889999987 55555545555543
No 91
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=25.16 E-value=99 Score=23.05 Aligned_cols=32 Identities=28% Similarity=0.512 Sum_probs=21.2
Q ss_pred eeEEEEEccceeCCCCCCCCHHHHHHHHHHHH
Q psy12284 126 HVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYV 157 (183)
Q Consensus 126 ~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~ 157 (183)
....++||-|.+.+....+..+.++++.+++.
T Consensus 53 ~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~ 84 (141)
T COG0816 53 QVDTVVVGLPLNMDGTEGPRAELARKFAERLK 84 (141)
T ss_pred CCCEEEEecCcCCCCCcchhHHHHHHHHHHHH
Confidence 56789999999988755444444444444443
No 92
>PRK12359 flavodoxin FldB; Provisional
Probab=24.05 E-value=89 Score=23.94 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=27.4
Q ss_pred EEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy12284 130 TVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQL 163 (183)
Q Consensus 130 i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l 163 (183)
-.||=+|+-....+.|.+.+++..+++..++.+|
T Consensus 138 ~f~gl~lD~~nq~~~t~~ri~~W~~~~~~~~~~~ 171 (172)
T PRK12359 138 LFVGLALDEVNQYDLSDERIQQWCEQILLEMAEL 171 (172)
T ss_pred EEEEEEEcCCCchhhhHHHHHHHHHHHHHHHHhh
Confidence 3788899977666678899999999998877665
No 93
>TIGR02739 TraF type-F conjugative transfer system pilin assembly protein TraF. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold and has been shown to be localized to the periplasm. Unlike the related protein TrbB (TIGR02738), TraF does not contain a conserved pair of cysteines and has been shown not to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. Even more closely related than TrbB is a clade of genes (TIGR02740) which do contain the CXXC motif, but it is unclear whether these genes are involved in type-F conjugation systems per se.
Probab=23.72 E-value=96 Score=25.52 Aligned_cols=50 Identities=12% Similarity=0.156 Sum_probs=35.2
Q ss_pred HHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCch-hhhHHHHhCCCeeeEeeeccc
Q psy12284 17 THVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKG-FVRIALKTGTPIVPVFTFGET 77 (183)
Q Consensus 17 ~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G-~~~lA~~~g~pIVPv~i~G~~ 77 (183)
+++++.+.+...++.|-.|+ +. + +.--.. .-.+|.++|..|+||.+.|..
T Consensus 142 ~~~i~~la~~~gL~fFy~~~-----C~---~---C~~~apil~~fa~~ygi~v~~VS~DG~~ 192 (256)
T TIGR02739 142 EKAIQQLSQSYGLFFFYRGK-----SP---I---SQKMAPVIQAFAKEYGISVIPISVDGTL 192 (256)
T ss_pred HHHHHHHHhceeEEEEECCC-----Cc---h---hHHHHHHHHHHHHHhCCeEEEEecCCCC
Confidence 34666676778899999986 22 2 222222 335899999999999999874
No 94
>PRK14556 pyrH uridylate kinase; Provisional
Probab=23.59 E-value=1.2e+02 Score=24.94 Aligned_cols=54 Identities=19% Similarity=0.233 Sum_probs=36.1
Q ss_pred HHHHHHhccCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEeeecccccc
Q psy12284 15 SITHVLTHSKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFTFGETDLY 80 (183)
Q Consensus 15 ~~~~~l~~l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i~G~~~~~ 80 (183)
+.+++.+++++|. ++||.+|+- .+. ...-.-++.+|...++..+=.+. ..+-+|
T Consensus 125 ~~~~~~~~l~~g~-vvi~~gg~G-----~p~-----~StD~lAallA~~l~Ad~Lii~T-dVDGVY 178 (249)
T PRK14556 125 SAHEFNQELAKGR-VLIFAGGTG-----NPF-----VTTDTTASLRAVEIGADALLKAT-TVNGVY 178 (249)
T ss_pred CHHHHHHHHhCCC-EEEEECCCC-----CCc-----CCcHHHHHHHHHHcCCCEEEEEe-CCCccC
Confidence 3445555566777 899999971 111 23446689999999999887665 344455
No 95
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=23.39 E-value=1.1e+02 Score=23.24 Aligned_cols=48 Identities=25% Similarity=0.160 Sum_probs=31.6
Q ss_pred eEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy12284 127 VLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFEDHKEKYVDDP 175 (183)
Q Consensus 127 ~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~~~~~~g~~~ 175 (183)
-+.+.+|=+.+..-.+..+.+...+...++.++|.+++..|++-+| |.
T Consensus 78 Gmkv~~Gl~~~~~~w~~~~~~~~~~~~~~v~~el~~~yg~h~sf~G-WY 125 (166)
T PF14488_consen 78 GMKVFVGLYFDPDYWDQGDLDWEAERNKQVADELWQRYGHHPSFYG-WY 125 (166)
T ss_pred CCEEEEeCCCCchhhhccCHHHHHHHHHHHHHHHHHHHcCCCCCce-EE
Confidence 4667777666543322223333445667788999999988998888 73
No 96
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=23.34 E-value=1.4e+02 Score=20.34 Aligned_cols=16 Identities=19% Similarity=0.528 Sum_probs=10.6
Q ss_pred CchhhhHHHHhCCCee
Q psy12284 54 RKGFVRIALKTGTPIV 69 (183)
Q Consensus 54 r~G~~~lA~~~g~pIV 69 (183)
..-...+|.+.++||+
T Consensus 74 ~~~v~~la~~~~i~vi 89 (105)
T PF07085_consen 74 SEEVLELAKELGIPVI 89 (105)
T ss_dssp -HHHHHHHHHHT-EEE
T ss_pred CHHHHHHHHHCCCEEE
Confidence 3557889999994443
No 97
>PF02026 RyR: RyR domain; InterPro: IPR003032 This domain is called RyR for Ryanodine receptor []. The domain is found in four copies in the ryanodine receptor. The function of this domain is unknown.; PDB: 4ETV_A 3RQR_A 4ETT_A 4ERT_A 4ESU_A 4ETU_A 4ERV_A 3NRT_E.
Probab=21.40 E-value=1.9e+02 Score=19.87 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=24.6
Q ss_pred ceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccC
Q psy12284 135 PIEVPKVEQPSNDLIAEYHKKYVDSLTQLFEDHKEKYV 172 (183)
Q Consensus 135 PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~~~~~~g 172 (183)
||++.... =..+++.+.+++.+...+.+...+..-|
T Consensus 6 Pvdts~v~--L~~~l~~~~E~lAen~H~~Wa~~r~~~G 41 (94)
T PF02026_consen 6 PVDTSQVT--LPPELEELIEKLAENEHDRWAKERIEQG 41 (94)
T ss_dssp -B-GTT------HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCcCCee--cCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 67766542 1466888999999999999988777755
No 98
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=21.38 E-value=1.1e+02 Score=24.74 Aligned_cols=45 Identities=13% Similarity=-0.026 Sum_probs=26.9
Q ss_pred cCCCceEEEEcCCcccccccCCCeeEEeecCCchhhhHHHHhCCCeeeEee
Q psy12284 23 SKGGRVLCLMVGGARESFKCKPGIYEIILKSRKGFVRIALKTGTPIVPVFT 73 (183)
Q Consensus 23 l~~G~~v~IfPeG~~e~~r~~~g~~~l~~~~r~G~~~lA~~~g~pIVPv~i 73 (183)
.++|-.++||||+. -+ |-.........=+..+|.+.++.||--+.
T Consensus 36 ~~~ga~lvvfPE~~----l~--g~~~~~~~~~~~l~~~ak~~~i~ii~G~~ 80 (270)
T cd07571 36 ADEKPDLVVWPETA----LP--FDLQRDPDALARLARAARAVGAPLLTGAP 80 (270)
T ss_pred ccCCCCEEEecCCc----CC--cccccCHHHHHHHHHHHHhcCCeEEEeee
Confidence 35588999999997 22 21110011223356688888998875444
Done!