Query psy12284
Match_columns 183
No_of_seqs 190 out of 1158
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 23:23:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iuq_A Glycerol-3-phosphate ac 99.5 7.6E-14 2.6E-18 117.1 7.4 123 17-172 213-350 (367)
2 4e17_B Catenin alpha-1; four h 72.6 6.1 0.00021 22.2 3.8 27 146-172 14-40 (40)
3 4e18_B Catenin alpha-1; four h 55.4 14 0.00047 22.5 3.4 28 145-172 32-59 (59)
4 2wuj_A Septum site-determining 41.3 29 0.001 20.7 3.3 24 145-168 21-44 (57)
5 3umv_A Deoxyribodipyrimidine p 38.7 19 0.00064 31.3 2.9 18 60-77 62-79 (506)
6 1o5x_A TIM, triosephosphate is 27.1 1E+02 0.0035 24.1 5.2 46 126-172 158-209 (248)
7 3qst_A Triosephosphate isomera 24.2 1.5E+02 0.0052 23.1 5.7 47 126-172 162-213 (255)
8 2qn6_B Translation initiation 23.9 50 0.0017 21.8 2.4 45 128-172 44-89 (93)
9 1r2r_A TIM, triosephosphate is 23.8 1.3E+02 0.0046 23.4 5.3 47 126-172 158-209 (248)
10 1m6j_A TIM, TPI, triosephospha 23.5 1.4E+02 0.0047 23.5 5.3 46 126-172 167-218 (261)
11 2yc6_A Triosephosphate isomera 23.3 1.3E+02 0.0045 23.6 5.2 45 127-172 164-214 (257)
12 2v5b_A Triosephosphate isomera 23.2 1.1E+02 0.0038 23.8 4.7 45 127-172 155-205 (244)
13 4ehp_B Catenin alpha-1; adhere 23.0 1.2E+02 0.0041 20.8 4.2 27 146-172 59-85 (111)
14 1ney_A TIM, triosephosphate is 22.0 1.1E+02 0.0036 24.0 4.4 46 126-172 157-208 (247)
15 2vxn_A Triosephosphate isomera 21.5 1.3E+02 0.0043 23.6 4.7 47 126-172 161-212 (251)
16 2xc8_A Gene 22 product; siphov 20.9 33 0.0011 23.3 1.0 11 28-38 100-110 (146)
17 3krs_A Triosephosphate isomera 20.8 3.1E+02 0.011 21.6 8.8 46 126-172 181-232 (271)
18 2i9e_A Triosephosphate isomera 20.3 1.1E+02 0.0039 24.0 4.2 46 126-172 157-208 (259)
No 1
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=99.46 E-value=7.6e-14 Score=117.13 Aligned_cols=123 Identities=16% Similarity=0.231 Sum_probs=83.3
Q ss_pred HHHHhccCC-CceEEEEcCCcccccccCC----CeeEEeecCCchhh----hHHHHhCCC--eeeEeeeccccccccccC
Q psy12284 17 THVLTHSKG-GRVLCLMVGGARESFKCKP----GIYEIILKSRKGFV----RIALKTGTP--IVPVFTFGETDLYDQVPN 85 (183)
Q Consensus 17 ~~~l~~l~~-G~~v~IfPeG~~e~~r~~~----g~~~l~~~~r~G~~----~lA~~~g~p--IVPv~i~G~~~~~~~~~~ 85 (183)
+++.+.|++ |.+++|||||| |+++ |.+. ..+|+.|.+ +||.++|+| |||+++. +.++++
T Consensus 213 ~~~~~~Lk~GG~sI~IFPEGT----RsR~~~~~g~l~-~~~Fk~gs~~~~~~LA~ksg~P~hIvPvaI~-t~~imp---- 282 (367)
T 1iuq_A 213 KEMALLLRGGSQLIWIAPSGG----RDRPDPSTGEWY-PAPFDASSVDNMRRLIQHSDVPGHLFPLALL-CHDIMP---- 282 (367)
T ss_dssp HHHHHHHHHCCCEEEECTTCS----CCCBCTTTCCBC-CCCCCHHHHHHHHHHHHTSSSCEEEEEEEEE-CGGGSC----
T ss_pred HHHHHHHHcCCeEEEEeCCCC----CCCCCCCCCccc-cccccchhhhHHHHHHHHcCCCceEEEEEEE-eccccC----
Confidence 344445677 56999999999 6664 4432 246999999 999999999 9999999 667652
Q ss_pred CCCchHHHHHHHHHHHcCcccccccccccccccccccccceeEEEEEccceeCCCC--CCCC-HHHHHHHHHHHHHHHHH
Q psy12284 86 PPGSWLLWLQERIRRVIGVAPCIPIGRGFFQYSFGLIPRRHVLTTVVGAPIEVPKV--EQPS-NDLIAEYHKKYVDSLTQ 162 (183)
Q Consensus 86 ~~g~~~~~~~~~~~~~~~~~~~l~~gr~~~~~~~~~lP~~~~i~i~vG~PI~~~~~--~~~~-~e~~~~~~~~~~~~l~~ 162 (183)
.+.-+ .+.++. ....+++++.+.||+||++++. ...+ .++.+++.+.+++.|.+
T Consensus 283 -pp~~v-------e~~~g~---------------~r~i~~~~V~v~ig~pI~~~~l~~~~e~~~e~~~~l~e~v~~~I~~ 339 (367)
T 1iuq_A 283 -PPSQV-------EIEIGE---------------KRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAM 339 (367)
T ss_dssp -CC--------------------------------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred -Ccccc-------cccccc---------------cceeecccEEEEECCccchhhccccccchHHHHHHHHHHHHHHHHH
Confidence 21100 000010 0122568999999999998763 1223 44567899999999999
Q ss_pred HHHHhh-cccC
Q psy12284 163 LFEDHK-EKYV 172 (183)
Q Consensus 163 l~~~~~-~~~g 172 (183)
.|++.+ ..+|
T Consensus 340 ~y~~l~~~i~~ 350 (367)
T 1iuq_A 340 QYNVLKTAISG 350 (367)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHhc
Confidence 998754 4444
No 2
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=72.57 E-value=6.1 Score=22.15 Aligned_cols=27 Identities=11% Similarity=0.063 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccC
Q psy12284 146 NDLIAEYHKKYVDSLTQLFEDHKEKYV 172 (183)
Q Consensus 146 ~e~~~~~~~~~~~~l~~l~~~~~~~~g 172 (183)
.|.+-.-...+.++|++|+.+|....|
T Consensus 14 kerIv~eCnavrqALQdLlseY~~~~g 40 (40)
T 4e17_B 14 RERIVAECNAVRQALQDLLSEYMGNAG 40 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 566777788899999999999987654
No 3
>4e18_B Catenin alpha-1; four helix bundle, cell adhesion; 2.40A {Mus musculus}
Probab=55.38 E-value=14 Score=22.51 Aligned_cols=28 Identities=11% Similarity=0.058 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhcccC
Q psy12284 145 SNDLIAEYHKKYVDSLTQLFEDHKEKYV 172 (183)
Q Consensus 145 ~~e~~~~~~~~~~~~l~~l~~~~~~~~g 172 (183)
..+.+-.-...+.++|++|+.+|....|
T Consensus 32 rke~Iv~eCnavrqALQdLlsEY~~~~g 59 (59)
T 4e18_B 32 RRERIVAECNAVRQALQDLLSEYMGNAG 59 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 3666777888999999999999987654
No 4
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=41.33 E-value=29 Score=20.66 Aligned_cols=24 Identities=8% Similarity=0.214 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhh
Q psy12284 145 SNDLIAEYHKKYVDSLTQLFEDHK 168 (183)
Q Consensus 145 ~~e~~~~~~~~~~~~l~~l~~~~~ 168 (183)
++++++++.+++.+.+.++..+..
T Consensus 21 ~~~EVD~FLd~v~~~~~~l~~e~~ 44 (57)
T 2wuj_A 21 DEDEVNEFLAQVRKDYEIVLRKKT 44 (57)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999987654
No 5
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=38.75 E-value=19 Score=31.26 Aligned_cols=18 Identities=17% Similarity=0.364 Sum_probs=13.9
Q ss_pred HHHHhCCCeeeEeeeccc
Q psy12284 60 IALKTGTPIVPVFTFGET 77 (183)
Q Consensus 60 lA~~~g~pIVPv~i~G~~ 77 (183)
.|.+.|.||+|||++...
T Consensus 62 ~a~~~~~pVl~vfildp~ 79 (506)
T 3umv_A 62 LAAASASPLAVAFALFPR 79 (506)
T ss_dssp HHHHHTCCEEEEEECCCT
T ss_pred hhhhcCCCEEEEEeccch
Confidence 333479999999999765
No 6
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=27.08 E-value=1e+02 Score=24.07 Aligned_cols=46 Identities=11% Similarity=0.122 Sum_probs=33.0
Q ss_pred eeEEEEEccce-eCCCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhhcccC
Q psy12284 126 HVLTTVVGAPI-EVPKVEQPSNDLIAEYHKKYVDSLTQLF-----EDHKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI-~~~~~~~~~~e~~~~~~~~~~~~l~~l~-----~~~~~~~g 172 (183)
.++.+.+ ||+ .+-.....++|+++++|+.+++.|.+++ +.-+-.||
T Consensus 158 ~~~vIAY-EPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYG 209 (248)
T 1o5x_A 158 DNVILVY-EPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYG 209 (248)
T ss_dssp TSEEEEE-CCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEEC
T ss_pred cCEEEEE-CCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEc
Confidence 4565655 454 3333345789999999999999999887 34567777
No 7
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=24.23 E-value=1.5e+02 Score=23.13 Aligned_cols=47 Identities=13% Similarity=-0.014 Sum_probs=33.0
Q ss_pred eeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhhcccC
Q psy12284 126 HVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLF-----EDHKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~-----~~~~~~~g 172 (183)
.++.+.+=++-.+-.....++|+++++|+.+++.|.+++ ++-+-.||
T Consensus 162 ~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYG 213 (255)
T 3qst_A 162 DDVVIAYEPIWAIGTGKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYG 213 (255)
T ss_dssp GGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEEC
T ss_pred CCEEEEECCHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEc
Confidence 456666533333433345689999999999999999987 34567787
No 8
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=23.94 E-value=50 Score=21.77 Aligned_cols=45 Identities=13% Similarity=0.167 Sum_probs=32.9
Q ss_pred EEE-EEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccC
Q psy12284 128 LTT-VVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLFEDHKEKYV 172 (183)
Q Consensus 128 i~i-~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~~~~~~g 172 (183)
+.+ .+|+|.+.=....+|.+...+..+...+++.+..+++...+-
T Consensus 44 vkI~~vgaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~ 89 (93)
T 2qn6_B 44 IKIYTIGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDIS 89 (93)
T ss_dssp EEEEESSTTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEEEEcCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 433 579998765544567888888888888888888887766543
No 9
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=23.82 E-value=1.3e+02 Score=23.38 Aligned_cols=47 Identities=11% Similarity=0.042 Sum_probs=33.0
Q ss_pred eeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhhcccC
Q psy12284 126 HVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLF-----EDHKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~-----~~~~~~~g 172 (183)
.++.+.+=++-.+-.....++|+++++|+.+++.|.+++ +.-+-.||
T Consensus 158 ~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYG 209 (248)
T 1r2r_A 158 SKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYG 209 (248)
T ss_dssp GGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEC
T ss_pred hceEEEEecHHhhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEc
Confidence 356666533334433345789999999999999999886 34677787
No 10
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=23.52 E-value=1.4e+02 Score=23.50 Aligned_cols=46 Identities=15% Similarity=0.204 Sum_probs=33.3
Q ss_pred eeEEEEEccce-eCCCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhhcccC
Q psy12284 126 HVLTTVVGAPI-EVPKVEQPSNDLIAEYHKKYVDSLTQLF-----EDHKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI-~~~~~~~~~~e~~~~~~~~~~~~l~~l~-----~~~~~~~g 172 (183)
.++.+.+ ||+ .+-.....++|+++++|+.+++.|.+++ ++-+-.||
T Consensus 167 ~~~vIAY-EPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYG 218 (261)
T 1m6j_A 167 KNIILAY-EPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYG 218 (261)
T ss_dssp GGEEEEE-CCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEC
T ss_pred CCEEEEE-CCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEc
Confidence 4666665 444 4433345789999999999999999886 34677787
No 11
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=23.29 E-value=1.3e+02 Score=23.57 Aligned_cols=45 Identities=9% Similarity=0.060 Sum_probs=32.2
Q ss_pred eEEEEEccce-eCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-----hhcccC
Q psy12284 127 VLTTVVGAPI-EVPKVEQPSNDLIAEYHKKYVDSLTQLFED-----HKEKYV 172 (183)
Q Consensus 127 ~i~i~vG~PI-~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~-----~~~~~g 172 (183)
++.+.+ ||+ .+-.....++|+++++|+.+++.|.+++.+ -+-.||
T Consensus 164 ~vvIAY-EPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYG 214 (257)
T 2yc6_A 164 EVVIAY-EPVWSIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYG 214 (257)
T ss_dssp TEEEEE-CCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEE-CCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEc
Confidence 555655 555 343334578999999999999999998864 456665
No 12
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=23.19 E-value=1.1e+02 Score=23.79 Aligned_cols=45 Identities=9% Similarity=0.079 Sum_probs=32.5
Q ss_pred eEEEEEccce-eCCCCCCCCHHHHHHHHHHHHHHHHHHHH-----HhhcccC
Q psy12284 127 VLTTVVGAPI-EVPKVEQPSNDLIAEYHKKYVDSLTQLFE-----DHKEKYV 172 (183)
Q Consensus 127 ~i~i~vG~PI-~~~~~~~~~~e~~~~~~~~~~~~l~~l~~-----~~~~~~g 172 (183)
++.|.+ ||+ .+-.....|+|+++++|+.+++.|.+++. +-+-.||
T Consensus 155 ~~vIAY-EPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYG 205 (244)
T 2v5b_A 155 RVVIAY-EPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYG 205 (244)
T ss_dssp GEEEEE-CCHHHHSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEEC
T ss_pred CEEEEE-CCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEc
Confidence 566655 444 33333457899999999999999999873 4567777
No 13
>4ehp_B Catenin alpha-1; adherens junctions, vinculin binding site, vinculin binding helix bundle, cell adhesion; 2.66A {Homo sapiens}
Probab=22.97 E-value=1.2e+02 Score=20.75 Aligned_cols=27 Identities=11% Similarity=0.063 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccC
Q psy12284 146 NDLIAEYHKKYVDSLTQLFEDHKEKYV 172 (183)
Q Consensus 146 ~e~~~~~~~~~~~~l~~l~~~~~~~~g 172 (183)
+|.|-...+.+.++|++|+.+|...-|
T Consensus 59 RerIv~eCnavRqaLQdLlseym~~~g 85 (111)
T 4ehp_B 59 RERIVAECNAVRQALQDLLSEYMGNAG 85 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 666778889999999999999999888
No 14
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=21.97 E-value=1.1e+02 Score=23.96 Aligned_cols=46 Identities=9% Similarity=0.094 Sum_probs=32.4
Q ss_pred eeEEEEEccce-eCCCCCCCCHHHHHHHHHHHHHHHHHHHH-----HhhcccC
Q psy12284 126 HVLTTVVGAPI-EVPKVEQPSNDLIAEYHKKYVDSLTQLFE-----DHKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI-~~~~~~~~~~e~~~~~~~~~~~~l~~l~~-----~~~~~~g 172 (183)
.++.+.+ +|+ .+-.....++|+++++|+.+++.|.+++. +-+-.||
T Consensus 157 ~~~vIAY-EPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYG 208 (247)
T 1ney_A 157 TNVVVAY-EPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYG 208 (247)
T ss_dssp TTEEEEE-CCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEE
T ss_pred cCEEEEE-CChhhcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEc
Confidence 3565555 444 34333457899999999999999999873 3566675
No 15
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=21.50 E-value=1.3e+02 Score=23.59 Aligned_cols=47 Identities=6% Similarity=-0.014 Sum_probs=32.9
Q ss_pred eeEEEEEccceeCCCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhhcccC
Q psy12284 126 HVLTTVVGAPIEVPKVEQPSNDLIAEYHKKYVDSLTQLF-----EDHKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI~~~~~~~~~~e~~~~~~~~~~~~l~~l~-----~~~~~~~g 172 (183)
.++.|.+=++-.+-.....++|+++++|+.+++.|.+++ ++-+-.||
T Consensus 161 ~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYG 212 (251)
T 2vxn_A 161 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYG 212 (251)
T ss_dssp GGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEE
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEc
Confidence 466666633334433345789999999999999999886 34567776
No 16
>2xc8_A Gene 22 product; siphoviridae, GRAM-positive phage, viral protein; 2.35A {Bacillus phage SPP1}
Probab=20.89 E-value=33 Score=23.33 Aligned_cols=11 Identities=27% Similarity=0.540 Sum_probs=8.9
Q ss_pred eEEEEcCCccc
Q psy12284 28 VLCLMVGGARE 38 (183)
Q Consensus 28 ~v~IfPeG~~e 38 (183)
++.+||.||||
T Consensus 100 svtvfpngtre 110 (146)
T 2xc8_A 100 SVTVFPNGTRE 110 (146)
T ss_dssp EEEECTTSCEE
T ss_pred EEEEcCCCccc
Confidence 67889999964
No 17
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=20.82 E-value=3.1e+02 Score=21.58 Aligned_cols=46 Identities=15% Similarity=0.171 Sum_probs=32.5
Q ss_pred eeEEEEEccce-eCCCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhhcccC
Q psy12284 126 HVLTTVVGAPI-EVPKVEQPSNDLIAEYHKKYVDSLTQLF-----EDHKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI-~~~~~~~~~~e~~~~~~~~~~~~l~~l~-----~~~~~~~g 172 (183)
.++.|.+ ||+ .+-.....++|+++++|+.+++.|.+++ ++-+-.||
T Consensus 181 ~~~vIAY-EPvWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYG 232 (271)
T 3krs_A 181 SNLVIAY-EPIWAIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYG 232 (271)
T ss_dssp TTEEEEE-CCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEEC
T ss_pred cCEEEEE-CChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEc
Confidence 3565555 454 3333345689999999999999999886 34577787
No 18
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=20.28 E-value=1.1e+02 Score=24.00 Aligned_cols=46 Identities=9% Similarity=0.163 Sum_probs=32.3
Q ss_pred eeEEEEEccce-eCCCCCCCCHHHHHHHHHHHHHHHHHHHH-----HhhcccC
Q psy12284 126 HVLTTVVGAPI-EVPKVEQPSNDLIAEYHKKYVDSLTQLFE-----DHKEKYV 172 (183)
Q Consensus 126 ~~i~i~vG~PI-~~~~~~~~~~e~~~~~~~~~~~~l~~l~~-----~~~~~~g 172 (183)
.++.+.+ ||+ .+-.....++|+++++|+.+++.|.+++. +-+-.||
T Consensus 157 ~~~vIAY-EPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYG 208 (259)
T 2i9e_A 157 SNVVIAY-EPVWAIGTGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYG 208 (259)
T ss_dssp TTEEEEE-CCGGGTTSSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEC
T ss_pred cCEEEEE-cCHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEc
Confidence 3565555 454 33333457899999999999999998763 3567776
Done!