BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12288
(393 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 463 bits (1191), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/391 (57%), Positives = 295/391 (75%), Gaps = 14/391 (3%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
D+QE +Y GGY V+IGDLFN RYHVIRKLGWGHFSTVWLSWD+Q K FVA+K+VKS
Sbjct: 13 DEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS 72
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
+ Y +TA DEI LLK+V +S N E V++LL+DFKI NGTHICMVFEV
Sbjct: 73 AEHYTETALDEIRLLKSV------RNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEV 126
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ + V+ II+QVL+GL+YLHT+CRIIHTDIKPENIL+ V+
Sbjct: 127 LGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQY 186
Query: 184 VRRMARDATKHHKIGMKLPM-----SLDSTMSDFSL--LDPANEVYDISVKIADLGNACW 236
+RR+A +AT+ + G P + +T +F + L+P N + VKIADLGNACW
Sbjct: 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKN-AEKLKVKIADLGNACW 245
Query: 237 IDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDD 296
+ HF ++IQTRQYRS+EVLIG+GY ADIWSTACMAFELATGDYLF+P +G+EY+RD+
Sbjct: 246 VHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDE 305
Query: 297 DHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA 356
DH+A I+EL+G +P++++ GK + +FT +G+ + I LKPWGL++VL EKY WS+ EA
Sbjct: 306 DHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEA 365
Query: 357 SDFADFLLPMLHVNQKLRASAADCLRHPWLN 387
+ F DFLLPML + + RA+AA+CLRHPWLN
Sbjct: 366 AGFTDFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 457 bits (1177), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/389 (58%), Positives = 287/389 (73%), Gaps = 12/389 (3%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y GGY PV+IGDLFN RYHVIRKLGWGHFSTVWL WD+Q K FVA+K+VKS
Sbjct: 7 EEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 66
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
Q Y +TA DEI LLK V R+S+ + + V++L++DFKI NG H+CMVFEV
Sbjct: 67 AQHYTETALDEIKLLKCV-RESDP-----SDPNKDMVVQLIDDFKISGMNGIHVCMVFEV 120
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ ++ V++II+QVL+GL+YLH++C+IIHTDIKPENILMCVD
Sbjct: 121 LGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAY 180
Query: 184 VRRMARDATKHHKIGMKLPM-SLDSTMSDFSLL----DPANEVYDISVKIADLGNACWID 238
VRRMA +AT+ K G P S ST LL DP N I VKIADLGNACW+
Sbjct: 181 VRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRN-ADKIRVKIADLGNACWVH 239
Query: 239 DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDH 298
HF ++IQTRQYRS+EVLIGAGY ADIWSTACMAFELATGDYLF+P +G++YSRD+DH
Sbjct: 240 KHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDH 299
Query: 299 LAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASD 358
+AHI+EL+G IP+ GK + +F +G R I LKPW L+ VL EKY W +A+
Sbjct: 300 IAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQ 359
Query: 359 FADFLLPMLHVNQKLRASAADCLRHPWLN 387
F DFL+PML + + RASA +CLRHPWLN
Sbjct: 360 FTDFLIPMLEMVPEKRASAGECLRHPWLN 388
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/384 (57%), Positives = 291/384 (75%), Gaps = 14/384 (3%)
Query: 11 EYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADT 70
+Y GGY V+IGDLFN RYHVIRKLGWGHFSTVWLSWD+Q K FVA+K+VKS + Y +T
Sbjct: 4 DYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTET 63
Query: 71 ARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR 130
A DEI LLK+V +S N E V++LL+DFKI NGTHICMVFEV+G++LL+
Sbjct: 64 ALDEIRLLKSV------RNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLK 117
Query: 131 LIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190
I +S+Y+G+ + V+ II+QVL+GL+YLHT+CRIIHTDIKPENIL+ V+ +RR+A +
Sbjct: 118 WIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAE 177
Query: 191 ATKHHKIGMKLPM-----SLDSTMSDFSL--LDPANEVYDISVKIADLGNACWIDDHFAD 243
AT+ + G P + +T +F + L+P N + VKIADLGNACW+ HF +
Sbjct: 178 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKN-AEKLKVKIADLGNACWVHKHFTE 236
Query: 244 EIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+IQTRQYRS+EVLIG+GY ADIWSTACMAFELATGDYLF+P +G+EY+RD+DH+A I+
Sbjct: 237 DIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALII 296
Query: 304 ELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFL 363
EL+G +P++++ GK + +FT +G+ + I LKPWGL++VL EKY WS+ EA+ F DFL
Sbjct: 297 ELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFL 356
Query: 364 LPMLHVNQKLRASAADCLRHPWLN 387
LPML + + RA+AA+CLRHPWLN
Sbjct: 357 LPMLELIPEKRATAAECLRHPWLN 380
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 338 bits (867), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/377 (46%), Positives = 238/377 (63%), Gaps = 41/377 (10%)
Query: 11 EYRPGGYCPVQIGDLF-NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD 69
+YRPGGY P G+ + + RY ++RKLGWGHFSTVWL+ D+ + T VA+KIV+ D+VY +
Sbjct: 1 DYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 70 TARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLL 129
A DEI LL+ V N ++ + +++LL+ F NG H+ MVFEV+G NLL
Sbjct: 61 AAEDEIKLLQRVNDADNTKE---DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLL 117
Query: 130 RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189
LI + +++GI + V+ I KQ+L GL+Y+H +C IIHTDIKPEN+LM +
Sbjct: 118 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI---------- 167
Query: 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ 249
+DS P N I +KIADLGNACW D+H+ + IQTR+
Sbjct: 168 ---------------VDS---------PENL---IQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 250 YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPI 309
YRS EVL+GA +G ADIWSTAC+ FEL TGD+LF+P G Y++DDDH+A I+EL+G +
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL 260
Query: 310 PKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHV 369
P +L GK T +F +G R I LK W L VLTEKY +SK EA + +DFL PML +
Sbjct: 261 PSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQL 320
Query: 370 NQKLRASAADCLRHPWL 386
+ + RA A + HPWL
Sbjct: 321 DPRKRADAGGLVNHPWL 337
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 337 bits (864), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 175/377 (46%), Positives = 238/377 (63%), Gaps = 41/377 (10%)
Query: 11 EYRPGGYCPVQIGDLF-NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD 69
+YRPGG+ P G+ + + RY ++RKLGWGHFSTVWL+ D+ + T VA+KIV+ D+VY +
Sbjct: 1 DYRPGGFHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 70 TARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLL 129
A DEI LL+ V N ++ + +++LL+ F NG H+ MVFEV+G NLL
Sbjct: 61 AAEDEIKLLQRVNDADNTKE---DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLL 117
Query: 130 RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189
LI + +++GI + V+ I KQ+L GL+Y+H +C IIHTDIKPEN+LM +
Sbjct: 118 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI---------- 167
Query: 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ 249
+DS P N I +KIADLGNACW D+H+ + IQTR+
Sbjct: 168 ---------------VDS---------PENL---IQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 250 YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPI 309
YRS EVL+GA +G ADIWSTAC+ FEL TGD+LF+P G Y++DDDH+A I+EL+G +
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL 260
Query: 310 PKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHV 369
P +L GK T +F +G R I LK W L VLTEKY +SK EA + +DFL PML +
Sbjct: 261 PSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQL 320
Query: 370 NQKLRASAADCLRHPWL 386
+ + RA A + HPWL
Sbjct: 321 DPRKRADAGGLVNHPWL 337
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 182/379 (48%), Gaps = 64/379 (16%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVG 82
G L N + VIRK+G G F V L + +K + A+K+V++ + Y +A+ E +LK +
Sbjct: 30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKI- 88
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ + +++ F Y H+C++FE +G +L +I R++Y G HI
Sbjct: 89 --------QNDDINNNNIVKYHGKFMYYD----HMCLIFEPLGPSLYEIITRNNYNGFHI 136
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY-DKVRRMARDATKHHKIGMKL 201
++++ ++L+ LNYL + + HTD+KPENIL+ Y +K R T KI +
Sbjct: 137 EDIKLYCIEILKALNYLR-KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYR 195
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
S +K+ D G A + D+ I TRQYR+ EV++ G+
Sbjct: 196 TKS-------------------TGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGW 236
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT- 320
++D+WS C+ EL TG LF E HLA + ++ PIPK +L + KT
Sbjct: 237 DVSSDMWSFGCVLAELYTGSLLFRTHEHME------HLAMMESIIQPIPKNMLYEATKTN 290
Query: 321 ---------LRYFTPQGNFRRIDNL----KPWGLYQVLTEKYHWSKAEASDFADFLLPML 367
L+ P+ N I+++ K LY+++ + F DFL +L
Sbjct: 291 GSKYVNKDELKLAWPE-NASSINSIKHVKKCLPLYKIIKHEL---------FCDFLYSIL 340
Query: 368 HVNQKLRASAADCLRHPWL 386
++ LR S A+ L+H +L
Sbjct: 341 QIDPTLRPSPAELLKHKFL 359
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 172/383 (44%), Gaps = 77/383 (20%)
Query: 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83
D +RY V++ +G G F V ++D + VALK+V++++ + A +EI +L+
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILE---- 148
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
H + + VI +L +F RN HICM FE++ NL LI ++ ++G +
Sbjct: 149 ----HLRKQDKDNTMNVIHMLENFTF--RN--HICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
VR +L+ L+ LH RIIH D+KPENIL+ ++ R
Sbjct: 201 LVRKFAHSILQCLDALHKN-RIIHCDLKPENILL-------KQQGRSG------------ 240
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP 263
+K+ D G++C+ IQ+R YR+ EV++GA YG
Sbjct: 241 ----------------------IKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGM 278
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
D+WS C+ EL TG L G++ + D LA ++EL+G +++L K+ +
Sbjct: 279 PIDMWSLGCILAELLTGYPLL---PGED---EGDQLACMIELLGMPSQKLLDASKRAKNF 332
Query: 324 FTPQGNFR--RIDNLKPW-----------GLYQVLTEKYHWSKA-EASD---FADFLLPM 366
+ +G R + L G + E W A + D F DFL
Sbjct: 333 VSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQC 392
Query: 367 LHVNQKLRASAADCLRHPWLNPR 389
L + +R + LRHPWL R
Sbjct: 393 LEWDPAVRMTPGQALRHPWLRRR 415
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 172/383 (44%), Gaps = 77/383 (20%)
Query: 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83
D +RY V++ +G G F V ++D + VALK+V++++ + A +EI +L+
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILE---- 148
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
H + + VI +L +F RN HICM FE++ NL LI ++ ++G +
Sbjct: 149 ----HLRKQDKDNTMNVIHMLENFTF--RN--HICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
VR +L+ L+ LH RIIH D+KPENIL+ ++ R
Sbjct: 201 LVRKFAHSILQCLDALHKN-RIIHCDLKPENILL-------KQQGRSG------------ 240
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP 263
+K+ D G++C+ IQ+R YR+ EV++GA YG
Sbjct: 241 ----------------------IKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGM 278
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
D+WS C+ EL TG L G++ + D LA ++EL+G +++L K+ +
Sbjct: 279 PIDMWSLGCILAELLTGYPLL---PGED---EGDQLACMIELLGMPSQKLLDASKRAKNF 332
Query: 324 FTPQGNFR--RIDNLKPW-----------GLYQVLTEKYHWSKA-EASD---FADFLLPM 366
+ +G R + L G + E W A + D F DFL
Sbjct: 333 VSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQC 392
Query: 367 LHVNQKLRASAADCLRHPWLNPR 389
L + +R + LRHPWL R
Sbjct: 393 LEWDPAVRMTPGQALRHPWLRRR 415
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 172/383 (44%), Gaps = 77/383 (20%)
Query: 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83
D +RY V++ +G G F V ++D + VALK+V++++ + A +EI +L+
Sbjct: 93 DHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILE---- 148
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
H + + VI +L +F RN HICM FE++ NL LI ++ ++G +
Sbjct: 149 ----HLRKQDKDNTMNVIHMLENFTF--RN--HICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
VR +L+ L+ LH RIIH D+KPENIL+ ++ R
Sbjct: 201 LVRKFAHSILQCLDALHKN-RIIHCDLKPENILL-------KQQGRSG------------ 240
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP 263
+K+ D G++C+ IQ+R YR+ EV++GA YG
Sbjct: 241 ----------------------IKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGM 278
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
D+WS C+ EL TG L G++ + D LA ++EL+G +++L K+ +
Sbjct: 279 PIDMWSLGCILAELLTGYPLL---PGED---EGDQLACMIELLGMPXQKLLDASKRAKNF 332
Query: 324 FTPQGNFR--RIDNLKPW-----------GLYQVLTEKYHWSKA-EASD---FADFLLPM 366
+ +G R + L G + E W A + D F DFL
Sbjct: 333 VSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQC 392
Query: 367 LHVNQKLRASAADCLRHPWLNPR 389
L + +R + LRHPWL R
Sbjct: 393 LEWDPAVRMTPGQALRHPWLRRR 415
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 180/391 (46%), Gaps = 84/391 (21%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
V+ G+ + RY + +G G F V ++D ++ +VA+KI+K+ + + + A+ E+ LL+
Sbjct: 46 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + ++T+ ++ L F RN H+C+VFE++ YNL L+ ++++G
Sbjct: 106 LMNK--------HDTEMKYYIVHLKRHFMF--RN--HLCLVFEMLSYNLYDLLRNTNFRG 153
Query: 140 IHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + R +Q+ L +L T + IIH D+KPENIL+C
Sbjct: 154 VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLC-------------------- 193
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
+P ++KI D G++C + IQ+R YRS EVL+G
Sbjct: 194 -----------------NPKRS----AIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLG 232
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A D+WS C+ E+ TG+ LF + + D + IVE++G P +L Q
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFSG------ANEVDQMNKIVEVLGIPPAHILDQAP 286
Query: 319 KTLRYFT--PQG--NFRRIDN----LKPWG---LYQVL------------TEKYHWSKAE 355
K ++F P G N ++ + KP G L+ +L E H + A+
Sbjct: 287 KARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGH-TVAD 345
Query: 356 ASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
F D +L ML + K R L+H +
Sbjct: 346 YLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 180/391 (46%), Gaps = 84/391 (21%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
V+ G+ + RY + +G G F V ++D ++ +VA+KI+K+ + + + A+ E+ LL+
Sbjct: 27 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 86
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + ++T+ ++ L F RN H+C+VFE++ YNL L+ ++++G
Sbjct: 87 LMNK--------HDTEMKYYIVHLKRHFMF--RN--HLCLVFEMLSYNLYDLLRNTNFRG 134
Query: 140 IHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + R +Q+ L +L T + IIH D+KPENIL+C
Sbjct: 135 VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLC-------------------- 174
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
+P ++KI D G++C + IQ+R YRS EVL+G
Sbjct: 175 -----------------NPKRS----AIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLG 213
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A D+WS C+ E+ TG+ LF + + D + IVE++G P +L Q
Sbjct: 214 MPYDLAIDMWSLGCILVEMHTGEPLFSG------ANEVDQMNKIVEVLGIPPAHILDQAP 267
Query: 319 KTLRYFT--PQG--NFRRIDN----LKPWG---LYQVL------------TEKYHWSKAE 355
K ++F P G N ++ + KP G L+ +L E H + A+
Sbjct: 268 KARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGH-TVAD 326
Query: 356 ASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
F D +L ML + K R L+H +
Sbjct: 327 YLKFKDLILRMLDYDPKTRIQPYYALQHSFF 357
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 180/391 (46%), Gaps = 84/391 (21%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
V+ G+ + RY + +G G F V ++D ++ +VA+KI+K+ + + + A+ E+ LL+
Sbjct: 46 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + ++T+ ++ L F RN H+C+VFE++ YNL L+ ++++G
Sbjct: 106 LMNK--------HDTEMKYYIVHLKRHFMF--RN--HLCLVFEMLSYNLYDLLRNTNFRG 153
Query: 140 IHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + R +Q+ L +L T + IIH D+KPENIL+C
Sbjct: 154 VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLC-------------------- 193
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
+P ++KI D G++C + IQ+R YRS EVL+G
Sbjct: 194 -----------------NPKRX----AIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLG 232
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A D+WS C+ E+ TG+ LF + + D + IVE++G P +L Q
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFSG------ANEVDQMNKIVEVLGIPPAHILDQAP 286
Query: 319 KTLRYFT--PQG--NFRRIDN----LKPWG---LYQVL------------TEKYHWSKAE 355
K ++F P G N ++ + KP G L+ +L E H + A+
Sbjct: 287 KARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGH-TVAD 345
Query: 356 ASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
F D +L ML + K R L+H +
Sbjct: 346 YLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 174/380 (45%), Gaps = 66/380 (17%)
Query: 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQVYADTARDEIVLLK 79
Q GD+ + RY ++ LG G F V D + VA+KIVK+ Y + AR EI +L+
Sbjct: 7 QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLE 66
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ NT R + + + +G HIC+VFE++G + I + +
Sbjct: 67 HL-----------NTTDPNSTFRCVQMLEWFEHHG-HICIVFELLGLSTYDFIKENGFLP 114
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ ++R + Q+ + +N+LH+ ++ HTD+KPENIL + D T+ + +
Sbjct: 115 FRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILF---------VQSDYTEAYNPKI 164
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
K + +L++P +K+ D G+A + D+H + + TR YR+ EV++
Sbjct: 165 K--------RDERTLINP-------DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILAL 209
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
G+ D+WS C+ E G +F KE HLA + ++GP+PK ++ + +K
Sbjct: 210 GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE------HLAMMERILGPLPKHMIQKTRK 263
Query: 320 TLRYF----------TPQGNF--RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPML 367
+YF + G + R LK + L Q E D + ML
Sbjct: 264 R-KYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQ---------DVEHERLFDLIQKML 313
Query: 368 HVNQKLRASAADCLRHPWLN 387
+ R + + L+HP+ +
Sbjct: 314 EYDPAKRITLREALKHPFFD 333
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 173/380 (45%), Gaps = 66/380 (17%)
Query: 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQVYADTARDEIVLLK 79
Q GD+ + RY ++ LG G F V D + VA+KIVK+ Y + AR EI +L+
Sbjct: 7 QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLE 66
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ NT R + + + +G HIC+VFE++G + I + +
Sbjct: 67 HL-----------NTTDPNSTFRCVQMLEWFEHHG-HICIVFELLGLSTYDFIKENGFLP 114
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ ++R + Q+ + +N+LH+ ++ HTD+KPENIL + D T+ + +
Sbjct: 115 FRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILF---------VQSDYTEAYNPKI 164
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
K + +L++P +K+ D G+A + D+H + + R YR+ EV++
Sbjct: 165 K--------RDERTLINP-------DIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILAL 209
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
G+ D+WS C+ E G +F KE HLA + ++GP+PK ++ + +K
Sbjct: 210 GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE------HLAMMERILGPLPKHMIQKTRK 263
Query: 320 TLRYF----------TPQGNF--RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPML 367
+YF + G + R LK + L Q E D + ML
Sbjct: 264 R-KYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQ---------DVEHERLFDLIQKML 313
Query: 368 HVNQKLRASAADCLRHPWLN 387
+ R + + L+HP+ +
Sbjct: 314 EYDPAKRITLREALKHPFFD 333
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 174/381 (45%), Gaps = 60/381 (15%)
Query: 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWD-LQDKTFVALKIVKSDQVYADTARDE 74
G+ +IGD RY ++ LG G F V D + K+ VALKI+++ Y + AR E
Sbjct: 39 GHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE 98
Query: 75 IVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIAR 134
I +LK + K + ++ + L++D+ ++ +G H+C+ FE++G N +
Sbjct: 99 INVLKKIKEKD---------KENKFLCVLMSDW--FNFHG-HMCIAFELLGKNTFEFLKE 146
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
++++ + +VR + Q+ L +LH + ++ HTD+KPENIL V
Sbjct: 147 NNFQPYPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILF------VNSEFETLYNE 199
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE 254
HK + V + S+++AD G+A + +H + TR YR E
Sbjct: 200 HKSCEE------------------KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPE 241
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
V++ G+ D+WS C+ FE G LF +E HL + +++GPIP ++
Sbjct: 242 VILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE------HLVMMEKILGPIPSHMI 295
Query: 315 SQGKKTLRYFTPQG--------NFRRI-DNLKPWGLYQVLTEKYHWSKAEASDFADFLLP 365
+ +K +YF G + R + +N KP Y + E D +
Sbjct: 296 HRTRKQ-KYFYKGGLVWDENSSDGRYVKENCKPLKSYML------QDSLEHVQLFDLMRR 348
Query: 366 MLHVNQKLRASAADCLRHPWL 386
ML + R + A+ L HP+
Sbjct: 349 MLEFDPAQRITLAEALLHPFF 369
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 173/381 (45%), Gaps = 60/381 (15%)
Query: 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWD-LQDKTFVALKIVKSDQVYADTARDE 74
G+ +IGD RY ++ LG G F V D + K+ VALKI+++ Y + AR E
Sbjct: 16 GHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE 75
Query: 75 IVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIAR 134
I +LK + K + ++ + L++D+ ++ +G H+C+ FE++G N +
Sbjct: 76 INVLKKIKEKD---------KENKFLCVLMSDW--FNFHG-HMCIAFELLGKNTFEFLKE 123
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
++++ + +VR + Q+ L +LH ++ HTD+KPENIL V
Sbjct: 124 NNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILF------VNSEFETLYNE 176
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE 254
HK + V + S+++AD G+A + +H + TR YR E
Sbjct: 177 HKSCEE------------------KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPE 218
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
V++ G+ D+WS C+ FE G LF +E HL + +++GPIP ++
Sbjct: 219 VILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE------HLVMMEKILGPIPSHMI 272
Query: 315 SQGKKTLRYFTPQG--------NFRRI-DNLKPWGLYQVLTEKYHWSKAEASDFADFLLP 365
+ +K +YF G + R + +N KP Y + E D +
Sbjct: 273 HRTRKQ-KYFYKGGLVWDENSSDGRYVKENCKPLKSYML------QDSLEHVQLFDLMRR 325
Query: 366 MLHVNQKLRASAADCLRHPWL 386
ML + R + A+ L HP+
Sbjct: 326 MLEFDPAQRITLAEALLHPFF 346
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 173/381 (45%), Gaps = 60/381 (15%)
Query: 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWD-LQDKTFVALKIVKSDQVYADTARDE 74
G+ +IGD RY ++ LG G F V D + K+ VALKI+++ Y + AR E
Sbjct: 7 GHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE 66
Query: 75 IVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIAR 134
I +LK + K + ++ + L++D+ ++ +G H+C+ FE++G N +
Sbjct: 67 INVLKKIKEKD---------KENKFLCVLMSDW--FNFHG-HMCIAFELLGKNTFEFLKE 114
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
++++ + +VR + Q+ L +LH ++ HTD+KPENIL V
Sbjct: 115 NNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILF------VNSEFETLYNE 167
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE 254
HK + V + S+++AD G+A + +H + TR YR E
Sbjct: 168 HKSCEE------------------KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPE 209
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
V++ G+ D+WS C+ FE G LF +E HL + +++GPIP ++
Sbjct: 210 VILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE------HLVMMEKILGPIPSHMI 263
Query: 315 SQGKKTLRYFTPQG--------NFRRI-DNLKPWGLYQVLTEKYHWSKAEASDFADFLLP 365
+ +K +YF G + R + +N KP Y + E D +
Sbjct: 264 HRTRKQ-KYFYKGGLVWDENSSDGRYVKENCKPLKSYML------QDSLEHVQLFDLMRR 316
Query: 366 MLHVNQKLRASAADCLRHPWL 386
ML + R + A+ L HP+
Sbjct: 317 MLEFDPAQRITLAEALLHPFF 337
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 173/388 (44%), Gaps = 64/388 (16%)
Query: 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWD-LQDKTFVALKIVKSDQVYADTARDE 74
G+ +GD RY ++ LG G F V D + VALKI+K+ + Y + AR E
Sbjct: 21 GHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLE 80
Query: 75 IVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIAR 134
I +L+ + K + +++ + F + H+C+ FE++G + +
Sbjct: 81 INVLEKINEK--------DPDNKNLCVQMFDWFDYHG----HMCISFELLGLSTFDFLKD 128
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC-VDYDKVRRMARDATK 193
++Y I VR + Q+ + + +LH ++ HTD+KPENIL DY+
Sbjct: 129 NNYLPYPIHQVRHMAFQLCQAVKFLHDN-KLTHTDLKPENILFVNSDYE----------- 176
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSV 253
L +L+ + S V +V++ D G+A + +H + + TR YR+
Sbjct: 177 -------LTYNLEKKRDERS-------VKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAP 222
Query: 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
EV++ G+ D+WS C+ FE G LF +E HLA + ++GPIP +
Sbjct: 223 EVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNRE------HLAMMERILGPIPSRM 276
Query: 314 LSQGKKTLRYF----------TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFL 363
+ + +K +YF T G + R +N KP L + LT + E D +
Sbjct: 277 IRKTRKQ-KYFYRGRLDWDENTSAGRYVR-ENCKP--LRRYLTSE----AEEHHQLFDLI 328
Query: 364 LPMLHVNQKLRASAADCLRHPWLNPRRS 391
ML R + + L+HP+ R+
Sbjct: 329 ESMLEYEPAKRLTLGEALQHPFFARLRA 356
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 160/365 (43%), Gaps = 80/365 (21%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSN 86
++ + KLG G ++TV+ + +VALK VK S++ TA EI L+K +
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL----- 60
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLI----ARSDYKGIHI 142
E ++RL + I++ N + +VFE M +L + + + +G+ +
Sbjct: 61 ---------KHENIVRLYD--VIHTEN--KLTLVFEFMDNDLKKYMDSRTVGNTPRGLEL 107
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
V+ Q+L+GL + H + +I+H D+KP+N+L+ + K+G
Sbjct: 108 NLVKYFQWQLLQGLAFCH-ENKILHRDLKPQNLLI------------NKRGQLKLG---- 150
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GY 261
DF L + I V + F+ E+ T YR+ +VL+G+ Y
Sbjct: 151 --------DFGLA----RAFGIPV------------NTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
+ DIWS C+ E+ TG LF + D++ L I +++G P E L L
Sbjct: 187 STSIDIWSCGCILAEMITGKPLFPG------TNDEEQLKLIFDIMG-TPNESLWPSVTKL 239
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
+ P I P L QVL + H + + DFL +L +N +R SA L
Sbjct: 240 PKYNPN-----IQQRPPRDLRQVL--QPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL 292
Query: 382 RHPWL 386
HPW
Sbjct: 293 HHPWF 297
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 6 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 65
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 66 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLXQVIQ 113
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++ D
Sbjct: 114 ME----LDHERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSD------------- 155
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
++KI D G A F + TR YR
Sbjct: 156 ------------------------------XTLKILDFGLARTAGTSFMMTPYVVTRYYR 185
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 239
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 296
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 297 IDPAKRISVDDALQHPYIN 315
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 13 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 72
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 73 ELVLMKXVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLXQVIQ 120
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++ D
Sbjct: 121 ME----LDHERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSD------------- 162
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
++KI D G A F + TR YR
Sbjct: 163 ------------------------------XTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 246
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 303
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 304 IDPAKRISVDDALQHPYIN 322
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 13 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 72
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 73 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLXQVIQ 120
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++ D
Sbjct: 121 ME----LDHERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSD------------- 162
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
++KI D G A F + TR YR
Sbjct: 163 ------------------------------XTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 246
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 303
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 304 IDPAKRISVDDALQHPYIN 322
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 161/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D I V E+M
Sbjct: 66 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQDVYI----------VMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLCQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A F E
Sbjct: 160 ----------------------------------KSDCTLKILDFGLARTAGTSFMMEPE 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY D+WS C+ E+ LF G++Y D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF---PGRDYI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 51 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 110
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 111 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 158
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 159 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 197
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 198 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 230
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 284
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 341
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 342 IDPAKRISVDDALQHPYIN 360
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 51 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 110
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 111 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 158
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 159 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 197
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 198 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 230
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 284
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 341
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 342 IDPAKRISVDDALQHPYIN 360
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 12 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 71
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 72 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 119
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 120 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 158
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 159 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 191
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 245
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 246 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 302
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 303 IDPAKRISVDDALQHPYIN 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 13 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 72
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 73 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 120
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 121 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 159
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 160 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 246
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 303
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 304 IDPAKRISVDDALQHPYIN 322
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 6 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 65
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 66 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 113
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 152
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 153 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 185
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 239
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 296
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 297 IDPAKRISVDDALQHPYIN 315
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 14 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 73
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 74 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 121
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 122 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 160
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 161 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 247
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 248 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 304
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 305 IDPAKRISVDDALQHPYIN 323
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 13 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 72
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 73 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 120
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 121 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 159
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 160 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 246
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 303
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 304 IDPAKRISVDDALQHPYIN 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 14 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 73
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 74 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 121
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 122 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 160
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 161 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 247
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 248 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 304
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 305 IDPAKRISVDDALQHPYIN 323
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 7 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 66
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 67 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 114
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 115 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 153
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 154 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 240
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 241 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 297
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 298 IDPAKRISVDDALQHPYIN 316
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 7 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 66
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 67 ELVLMKCVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 114
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 115 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 153
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 154 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 240
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 241 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 297
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 298 IDPAKRISVDDALQHPYIN 316
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 162/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D + +V E+M
Sbjct: 66 HAKRAYRELVLMKVVNHKNII--GLLNVFTPQKSLEEFQD----------VYIVMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLSQVIQME----LDHERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
DAT +KI D G A F
Sbjct: 160 -KSDAT---------------------------------LKILDFGLARTAGTSFMMTPY 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 13 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 72
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 73 ELVLMKXVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLXQVIQ 120
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++ D
Sbjct: 121 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSD------------- 162
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
++KI D G A F + TR YR
Sbjct: 163 ------------------------------XTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 246
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 303
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 304 IDPAKRISVDDALQHPYIN 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D I V E+M
Sbjct: 66 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQDVYI----------VMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLCQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A F E
Sbjct: 160 ----------------------------------KSDCTLKILDFGLARTAGTSFMMTPE 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E + +AS D
Sbjct: 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NALKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 13 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 72
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 73 ELVLMKXVNHKNII--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVIQ 120
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++ D
Sbjct: 121 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSD------------- 162
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
++KI D G A F + TR YR
Sbjct: 163 ------------------------------XTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 246
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 303
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 304 IDPAKRISVDDALQHPYIN 322
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 162/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D + +V E+M
Sbjct: 66 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQD----------VYIVMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLSQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
DAT +KI D G A F
Sbjct: 160 -KSDAT---------------------------------LKILDFGLARTAGTSFMMTPY 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 162/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D + +V E+M
Sbjct: 66 HAKRAYRELVLMKVVNHKNII--GLLNVFTPQKSLEEFQD----------VYIVMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLSQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
DAT +KI D G A F
Sbjct: 160 -KSDAT---------------------------------LKILDFGLARTAGTSFMMTPY 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 161/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D + +V E+M
Sbjct: 66 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQD----------VYIVMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLCQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A F
Sbjct: 160 ----------------------------------KSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D I V E+M
Sbjct: 66 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQDVYI----------VMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLCQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A F E
Sbjct: 160 ----------------------------------KSDCTLKILDFGLARTAGTSFMMEPE 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ LF G++Y D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILF---PGRDYI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 161/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D + +V E+M
Sbjct: 66 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQD----------VYIVMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLSQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A F
Sbjct: 160 ----------------------------------KSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D I V E+M
Sbjct: 66 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQDVYI----------VMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLCQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A F
Sbjct: 160 ----------------------------------KSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 7 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 66
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D I V E+M
Sbjct: 67 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQDVYI----------VMELMDA 114
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 115 NLCQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 160
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A F
Sbjct: 161 ----------------------------------KSDCTLKILDFGLARTAGTSFMMTPY 186
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D ++E
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIE 240
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 241 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 297
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 298 LLSKMLVIDASKRISVDEALQHPYIN 323
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 8 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 67
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D I V E+M
Sbjct: 68 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQDVYI----------VMELMDA 115
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 116 NLCQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 161
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A F
Sbjct: 162 ----------------------------------KSDCTLKILDFGLARTAGTSFMMVPF 187
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D ++E
Sbjct: 188 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIE 241
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 242 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 298
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 299 LLSKMLVIDASKRISVDEALQHPYIN 324
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 160/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 11 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 70
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D I V E+M
Sbjct: 71 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQDVYI----------VMELMDA 118
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 119 NLCQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 164
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A F
Sbjct: 165 ----------------------------------KSDCTLKILDFGLARTAGTSFMMTPY 190
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY D+WS C+ E+ LF G++Y D ++E
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF---PGRDYI---DQWNKVIE 244
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 245 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 301
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 302 LLSKMLVIDASKRISVDEALQHPYIN 327
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 148/368 (40%), Gaps = 71/368 (19%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAV 81
+G + RY + ++G G + TV+ + D FVALK V+ I ++ V
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHI--CMVFEVMGYNLLRLIARSDYKG 139
+ + + V+RL+ D SR I +VFE + +L + ++ G
Sbjct: 63 ALLRRLEAFEH-----PNVVRLM-DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG 116
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ + ++ +++Q L GL++LH C I+H D+KPENIL+ T +
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILV--------------TSGGTV-- 159
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L +Y + + + W YR+ EVL+ +
Sbjct: 160 --------KLADFGL----ARIYSYQMALTPVVVTLW-------------YRAPEVLLQS 194
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y D+WS C+ E+ LF G + D L I +L+G P++ +
Sbjct: 195 TYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLGKIFDLIGLPPEDDWPRDVS 248
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
R P R + ++ P + E S A LL ML N R SA
Sbjct: 249 LPRGAFPPRGPRPVQSVVP--------------EMEESG-AQLLLEMLTFNPHKRISAFR 293
Query: 380 CLRHPWLN 387
L+H +L+
Sbjct: 294 ALQHSYLH 301
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V+IGD F RY ++ +G G V ++D + VA+K + +Q +A A
Sbjct: 7 VEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR 66
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + N +K + D I V E+M NL ++I
Sbjct: 67 ELVLMKCVNHKNII--GLLNVFTPQKSLEEFQDVYI----------VMELMDANLCQVIQ 114
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 115 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 153
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 154 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY D+WS C+ E+ LF G++Y D ++E +G
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILF---PGRDYI---DQWNKVIEQLGTPCP 240
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ + L P L+ +E +K +AS D L ML
Sbjct: 241 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARDLLSKMLV 297
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S + L+HP++N
Sbjct: 298 IDASKRISVDEALQHPYIN 316
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 154/368 (41%), Gaps = 79/368 (21%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY ++ +G G V ++D VA+K + +Q +A A E+VLLK V K+
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN 84
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ S N +K + D + +V E+M NL ++I + + + +
Sbjct: 85 II--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVI----HMELDHERM 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 129 SYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------------------- 159
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLG---NACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
D ++KI D G AC + + TR YR+ EV++G GY
Sbjct: 160 ---------------KSDCTLKILDFGLARTAC-TNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
DIWS C+ EL G +F G ++ D ++E +G E ++ + T+R
Sbjct: 204 ANVDIWSVGCIMGELVKGCVIFQ---GTDHI---DQWNKVIEQLGTPSAEFMAALQPTVR 257
Query: 323 YFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
+ P+ + + L P ++ +E+ K + S D L ML ++ R S +
Sbjct: 258 NYVENRPKYPGIKFEELFPDWIFPSESER---DKIKTSQARDLLSKMLVIDPDKRISVDE 314
Query: 380 CLRHPWLN 387
LRHP++
Sbjct: 315 ALRHPYIT 322
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 161/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D + +V E+M
Sbjct: 66 HAKRAYRELVLMKVVNHKNII--GLLNVFTPQKSLEEFQD----------VYIVMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLSQVIQME----LDHERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
DAT +KI D G A F
Sbjct: 160 -KSDAT---------------------------------LKILDFGLARTAGTSFMMTPY 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS + E+ G LF G ++ D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF---PGTDHI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 152/367 (41%), Gaps = 77/367 (20%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY ++ +G G V ++D VA+K + +Q +A A E+VLLK V K+
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ S N +K + D + +V E+M NL ++I + + + +
Sbjct: 83 II--SLLNVFTPQKTLEEFQD----------VYLVMELMDANLCQVI----HMELDHERM 126
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 127 SYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------------------- 157
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYRSVEVLIGAGYGP 263
D ++KI D G A +F + TR YR+ EV++G GY
Sbjct: 158 ---------------KSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKE 202
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
DIWS C+ EL G +F G ++ D ++E +G E ++ + T+R
Sbjct: 203 NVDIWSVGCIMGELVKGSVIFQ---GTDHI---DQWNKVIEQLGTPSAEFMAALQPTVRN 256
Query: 324 FT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
+ P + L P ++ +E+ K + S D L ML ++ R S +
Sbjct: 257 YVENRPAYPGIAFEELFPDWIFPSESER---DKIKTSQARDLLSKMLVIDPDKRISVDEA 313
Query: 381 LRHPWLN 387
LRHP++
Sbjct: 314 LRHPYIT 320
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 161/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D + +V E+M
Sbjct: 66 HAKRAYRELVLMKVVNHKNII--GLLNVFTPQKSLEEFQD----------VYIVMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLSQVIQME----LDHERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
DAT +KI D G A F
Sbjct: 160 -KSDAT---------------------------------LKILDFGLARTAGTSFMMTPY 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS + E+ G LF G ++ D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF---PGTDHI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 82/365 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDEIVLLKAVGRK 84
RY + ++G G + TV+ + D FVALK V+ + + T R E+ LL+ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRL--- 60
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHI--CMVFEVMGYNLLRLIARSDYKGIHI 142
A+ V+RL+ D SR I +VFE + +L + ++ G+
Sbjct: 61 -----EAFE---HPNVVRLM-DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ ++ +++Q L GL++LH C I+H D+KPENIL+ T +
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILV--------------TSGGTV----- 151
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
++DF L +Y + +A + W YR+ EVL+ + Y
Sbjct: 152 -----KLADFGL----ARIYSYQMALAPVVVTLW-------------YRAPEVLLQSTYA 189
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
D+WS C+ E+ LF G + + D L I +L+G P++ + R
Sbjct: 190 TPVDMWSVGCIFAEMFRRKPLF---CG---NSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
P R + ++ P + E S A LL ML N R SA L+
Sbjct: 244 GAFPPRGPRPVQSVVP--------------EMEESG-AQLLLEMLTFNPHKRISAFRALQ 288
Query: 383 HPWLN 387
H +L+
Sbjct: 289 HSYLH 293
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 150/367 (40%), Gaps = 86/367 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDEIVLLKAVGRK 84
RY + ++G G + TV+ + D FVALK V+ + + T R E+ LL+ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRL--- 60
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHI--CMVFEVMGYNLLRLIARSDYKGIHI 142
A+ V+RL+ D SR I +VFE + +L + ++ G+
Sbjct: 61 -----EAFE---HPNVVRLM-DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ ++ +++Q L GL++LH C I+H D+KPENIL+
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGG--------------------- 149
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE--IQTRQYRSVEVLIGAG 260
+VK+AD G A A + + T YR+ EVL+ +
Sbjct: 150 ----------------------TVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQST 187
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y D+WS C+ E+ LF G + + D L I +L+G P++ +
Sbjct: 188 YATPVDMWSVGCIFAEMFRRKPLF---CG---NSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
R P R + ++ P + E S A LL ML N R SA
Sbjct: 242 PRGAFPPRGPRPVQSVVP--------------EMEESG-AQLLLEMLTFNPHKRISAFRA 286
Query: 381 LRHPWLN 387
L+H +L+
Sbjct: 287 LQHSYLH 293
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 149/367 (40%), Gaps = 86/367 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDEIVLLKAVGRK 84
RY + ++G G + TV+ + D FVALK V+ + + T R E+ LL+ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRL--- 60
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHI--CMVFEVMGYNLLRLIARSDYKGIHI 142
A+ V+RL+ D SR I +VFE + +L + ++ G+
Sbjct: 61 -----EAFE---HPNVVRLM-DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ ++ +++Q L GL++LH C I+H D+KPENIL+
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGG--------------------- 149
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQTRQYRSVEVLIGAG 260
+VK+AD G A A + T YR+ EVL+ +
Sbjct: 150 ----------------------TVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQST 187
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y D+WS C+ E+ LF G + + D L I +L+G P++ +
Sbjct: 188 YATPVDMWSVGCIFAEMFRRKPLF---CG---NSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
R P R + ++ P + E S A LL ML N R SA
Sbjct: 242 PRGAFPPRGPRPVQSVVP--------------EMEESG-AQLLLEMLTFNPHKRISAFRA 286
Query: 381 LRHPWLN 387
L+H +L+
Sbjct: 287 LQHSYLH 293
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 164/371 (44%), Gaps = 61/371 (16%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVAL-KIVKSDQVYADTARD--EIVLLKAVGRKS 85
+Y +++KLG G + VW S D + VA+ KI + Q D R EI++L +
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS--- 66
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
E ++ LLN + + N + +VF+ M +L +I + + +H Q V
Sbjct: 67 ----------GHENIVNLLNVLR--ADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV 114
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD-YDKVRR--MARDATKHHKIGMKLP 202
+ Q+++ + YLH+ ++H D+KP NIL+ + + KV ++R ++ +P
Sbjct: 115 ---VYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-Y 261
+S++ +F P D + TR YR+ E+L+G+ Y
Sbjct: 171 LSINENTENFDDDQPI----------------------LTDYVATRWYRAPEILLGSTKY 208
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG-PIPKEVLSQ---- 316
D+WS C+ E+ G +F + + L I+ ++ P ++V S
Sbjct: 209 TKGIDMWSLGCILGEILCGKPIFPGSSTM------NQLERIIGVIDFPSNEDVESIQSPF 262
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRA 375
K + + R+ + + ++ L K + KA+ ++ A D L +L N R
Sbjct: 263 AKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKIN-PKADCNEEALDLLDKLLQFNPNKRI 321
Query: 376 SAADCLRHPWL 386
SA D L+HP++
Sbjct: 322 SANDALKHPFV 332
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 152/369 (41%), Gaps = 95/369 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G + V+ + D Q + VALK ++ D+ TA EI LLK + +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
V S + SE+ + L VFE M +L +++ + G+ +
Sbjct: 81 IV--SLIDVIHSERCLTL----------------VFEFMEKDLKKVLDENK-TGLQDSQI 121
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ + Q+L G+ + H Q RI+H D+KP+N+L+ D A K
Sbjct: 122 KIYLYQLLRGVAHCH-QHRILHRDLKPQNLLINSD---------GALK------------ 159
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPA 264
++DF L + I V+ + E+ T YR+ +VL+G+ Y +
Sbjct: 160 ---LADFGL----ARAFGIPVR------------SYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG-PIPKEVLSQGKKTLRY 323
DIWS C+ E+ TG LF DDD L I ++G P P+E
Sbjct: 201 VDIWSIGCIFAEMITGKPLFPGVT------DDDQLPKIFSILGTPNPRE----------- 243
Query: 324 FTPQGNFRRIDNLKPWG--LYQVLTEKYHWSK---AEASDFADFLLPMLHVNQKLRASAA 378
+ ++ L W +QV EK WS + D L ML + R SA
Sbjct: 244 ------WPQVQELPLWKQRTFQVF-EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR 296
Query: 379 DCLRHPWLN 387
D + HP+
Sbjct: 297 DAMNHPYFK 305
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 152/369 (41%), Gaps = 95/369 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G + V+ + D Q + VALK ++ D+ TA EI LLK + +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
V S + SE+ + L VFE M +L +++ + G+ +
Sbjct: 81 IV--SLIDVIHSERCLTL----------------VFEFMEKDLKKVLDENK-TGLQDSQI 121
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ + Q+L G+ + H Q RI+H D+KP+N+L ++ D ++A
Sbjct: 122 KIYLYQLLRGVAHCH-QHRILHRDLKPQNLL--INSDGALKLA----------------- 161
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPA 264
DF L + I V+ + E+ T YR+ +VL+G+ Y +
Sbjct: 162 -----DFGL----ARAFGIPVR------------SYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG-PIPKEVLSQGKKTLRY 323
DIWS C+ E+ TG LF DDD L I ++G P P+E
Sbjct: 201 VDIWSIGCIFAEMITGKPLFPGVT------DDDQLPKIFSILGTPNPRE----------- 243
Query: 324 FTPQGNFRRIDNLKPWG--LYQVLTEKYHWSK---AEASDFADFLLPMLHVNQKLRASAA 378
+ ++ L W +QV EK WS + D L ML + R SA
Sbjct: 244 ------WPQVQELPLWKQRTFQVF-EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR 296
Query: 379 DCLRHPWLN 387
D + HP+
Sbjct: 297 DAMNHPYFK 305
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 143/365 (39%), Gaps = 84/365 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V S+D++ +A+K + ++A E+ LLK +
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKH-- 109
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
E VI LL+ F + + +V +MG +L ++ H+Q
Sbjct: 110 ------------ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 157
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 158 ---FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV-------------------------- 187
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYG 262
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 188 ---------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 230
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
DIWS C+ EL TG LF G ++ + L I+ L G P V+S+
Sbjct: 231 MTVDIWSVGCIMAELLTGRTLF---PGTDHI---NQLQQIMRLTGTPPASVISR------ 278
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
P R N P + + + + A D L ML ++ R +A++ L
Sbjct: 279 --MPSHEARNYINSLPQMPKRNFADVFIGANPLA---VDLLEKMLVLDTDKRITASEALA 333
Query: 383 HPWLN 387
HP+ +
Sbjct: 334 HPYFS 338
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 155/373 (41%), Gaps = 90/373 (24%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLL 78
+G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LL
Sbjct: 2 LGSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
K + + +++LL+ I++ N + +VFE + +L + + S
Sbjct: 60 KELNHPN--------------IVKLLD--VIHTENKLY--LVFEFLSMDLKKFMDASALT 101
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
GI + +++ + Q+L+GL + H+ R++H D+KPEN+L+ + A K
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTE---------GAIK----- 146
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 147 ----------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLG 180
Query: 259 AG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPG 233
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLR 374
++ + P + W + +SK D L MLH + R
Sbjct: 234 VTSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 278
Query: 375 ASAADCLRHPWLN 387
SA L HP+
Sbjct: 279 ISAKAALAHPFFQ 291
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 148/361 (40%), Gaps = 85/361 (23%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSNVHSSAY 92
+G G + +V + D + VA+K + +++A A E++LLK +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM----------- 98
Query: 93 NTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIK 150
E VI LL+ F S RN +V M +L +++ + ++ ++
Sbjct: 99 ---QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGME----FSEEKIQYLVY 151
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
Q+L+GL Y+H+ ++H D+KP N+ +
Sbjct: 152 QMLKGLKYIHS-AGVVHRDLKPGNLAV--------------------------------- 177
Query: 211 DFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIWS 269
NE D +KI D G A D + TR YR+ EV++ Y DIWS
Sbjct: 178 --------NE--DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWS 227
Query: 270 TACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329
C+ E+ TG LF GK+Y D L I+++ G +P G + ++ +
Sbjct: 228 VGCIMAEMLTGKTLF---KGKDYL---DQLTQILKVTG-VP------GTEFVQKLNDKAA 274
Query: 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389
I +L P + T+ + + +A AD L ML ++ R +AA L HP+ P
Sbjct: 275 KSYIQSL-PQTPRKDFTQLFPRASPQA---ADLLEKMLELDVDKRLTAAQALTHPFFEPF 330
Query: 390 R 390
R
Sbjct: 331 R 331
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 154/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 1 GSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + + S G
Sbjct: 59 ELNHPN--------------IVKLLD--VIHTENKLY--LVFEFLSMDLKKFMDASALTG 100
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KPEN+L+ + A K
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTE---------GAIK------ 144
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 145 ---------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGC 179
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 232
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 233 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 277
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 278 SAKAALAHPFFQ 289
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 148/361 (40%), Gaps = 85/361 (23%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSNVHSSAY 92
+G G + +V + D + VA+K + +++A A E++LLK +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH--------- 82
Query: 93 NTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIK 150
E VI LL+ F S RN +V M +L +++ + ++ ++
Sbjct: 83 -----ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK----FSEEKIQYLVY 133
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
Q+L+GL Y+H+ ++H D+KP N+ +
Sbjct: 134 QMLKGLKYIHS-AGVVHRDLKPGNLAV--------------------------------- 159
Query: 211 DFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIWS 269
NE D +KI D G A D + TR YR+ EV++ Y DIWS
Sbjct: 160 --------NE--DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWS 209
Query: 270 TACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329
C+ E+ TG LF GK+Y D L I+++ G +P G + ++ +
Sbjct: 210 VGCIMAEMLTGKTLF---KGKDYL---DQLTQILKVTG-VP------GTEFVQKLNDKAA 256
Query: 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389
I +L P + T+ + + +A AD L ML ++ R +AA L HP+ P
Sbjct: 257 KSYIQSL-PQTPRKDFTQLFPRASPQA---ADLLEKMLELDVDKRLTAAQALTHPFFEPF 312
Query: 390 R 390
R
Sbjct: 313 R 313
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 154/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 2 GSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + + S G
Sbjct: 60 ELNHPN--------------IVKLLD--VIHTEN--KLYLVFEFLHQDLKKFMDASALTG 101
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KPEN+L+ + A K
Sbjct: 102 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTE---------GAIK------ 145
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 146 ---------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGC 180
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 233
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 234 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 278
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 279 SAKAALAHPFFQ 290
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 154/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 1 GSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + + S G
Sbjct: 59 ELNHPN--------------IVKLLD--VIHTEN--KLYLVFEFLHQDLKKFMDASALTG 100
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KPEN+L+ + A K
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTE---------GAIK------ 144
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 145 ---------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGC 179
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 232
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 233 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 277
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 278 SAKAALAHPFFQ 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 155/373 (41%), Gaps = 90/373 (24%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLL 78
+G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LL
Sbjct: 3 LGSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 60
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
K + + +++LL+ I++ N + +VFE + +L + + S
Sbjct: 61 KELNHPN--------------IVKLLD--VIHTEN--KLYLVFEFLHQDLKKFMDASALT 102
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
GI + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 103 GIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK----- 147
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 148 ----------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLG 181
Query: 259 AG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPG 234
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLR 374
++ + P + W + +SK D L MLH + R
Sbjct: 235 VTSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 279
Query: 375 ASAADCLRHPWLN 387
SA L HP+
Sbjct: 280 ISAKAALAHPFFQ 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 155/373 (41%), Gaps = 90/373 (24%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLL 78
+G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LL
Sbjct: 2 LGSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
K + + +++LL+ I++ N + +VFE + +L + + S
Sbjct: 60 KELNHPN--------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALT 101
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
GI + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK----- 146
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 147 ----------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLG 180
Query: 259 AG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPG 233
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLR 374
++ + P + W + +SK D L MLH + R
Sbjct: 234 VTSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 278
Query: 375 ASAADCLRHPWLN 387
SA L HP+
Sbjct: 279 ISAKAALAHPFFQ 291
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 154/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 1 GSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + + S G
Sbjct: 59 ELNHPN--------------IVKLLD--VIHTEN--KLYLVFEFLHQDLKKFMDASALTG 100
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------ 144
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 145 ---------LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGC 179
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 232
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 233 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 277
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 278 SAKAALAHPFFQ 289
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 154/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 2 GSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + + S G
Sbjct: 60 ELNHPN--------------IVKLLD--VIHTEN--KLYLVFEFLHQDLKKFMDASALTG 101
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 102 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------ 145
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 146 ---------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGC 180
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 233
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 234 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 278
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 279 SAKAALAHPFFQ 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 154/371 (41%), Gaps = 90/371 (24%)
Query: 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKA 80
D+ NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 5 DMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI 140
+ + +++LL+ I++ N + +VFE + +L + + S GI
Sbjct: 63 LNHPN--------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGI 104
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 105 PLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------- 147
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG 260
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 148 --------LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGCK 183
Query: 261 -YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVT 236
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRAS 376
++ + P + W + +SK D L MLH + R S
Sbjct: 237 SMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 281
Query: 377 AADCLRHPWLN 387
A L HP+
Sbjct: 282 AKAALAHPFFQ 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 154/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 2 GSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + + S G
Sbjct: 60 ELNHPN--------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTG 101
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 102 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------ 145
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 146 ---------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGC 180
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 233
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 234 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 278
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 279 SAKAALAHPFFQ 290
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 154/373 (41%), Gaps = 90/373 (24%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLL 78
+G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LL
Sbjct: 1 LGSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
K + + +++LL+ I++ N + +VFE + +L + S
Sbjct: 59 KELNHPN--------------IVKLLD--VIHTENKLY--LVFEFLSMDLKDFMDASALT 100
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
GI + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK----- 145
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 146 ----------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLG 179
Query: 259 AG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPG 232
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLR 374
++ + P + W + +SK D L MLH + R
Sbjct: 233 VTSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 277
Query: 375 ASAADCLRHPWLN 387
SA L HP+
Sbjct: 278 ISAKAALAHPFFQ 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 154/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 3 GSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + + S G
Sbjct: 61 ELNHPN--------------IVKLLD--VIHTEN--KLYLVFEFLHQDLKKFMDASALTG 102
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------ 146
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 147 ---------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGC 181
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 234
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 235 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 279
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 280 SAKAALAHPFFQ 291
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 151/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 64 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL++ H+ R++H D+KP+N+L+ + A K
Sbjct: 107 SYLFQLLQGLSFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 143
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 144 --LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 238
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 239 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 383 HPWLN 387
HP+
Sbjct: 284 HPFFQ 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 154/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 1 GSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + + S G
Sbjct: 59 ELNHPN--------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTG 100
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------ 144
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 145 ---------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGC 179
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 232
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 233 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 277
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 278 SAKAALAHPFFQ 289
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 154/373 (41%), Gaps = 90/373 (24%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLL 78
+G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LL
Sbjct: 2 LGSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
K + + +++LL+ I++ N + +VFE + +L + S
Sbjct: 60 KELNHPN--------------IVKLLD--VIHTENKLY--LVFEFLSMDLKDFMDASALT 101
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
GI + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK----- 146
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 147 ----------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLG 180
Query: 259 AG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPG 233
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLR 374
++ + P + W + +SK D L MLH + R
Sbjct: 234 VTSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 278
Query: 375 ASAADCLRHPWLN 387
SA L HP+
Sbjct: 279 ISAKAALAHPFFQ 291
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 151/369 (40%), Gaps = 88/369 (23%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVG 82
F + + K+G G + V+ + + VALK ++ D + TA EI LLK +
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 67
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ +++LL+ I++ N + +VFE + +L + + S GI +
Sbjct: 68 HPN--------------IVKLLD--VIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPL 109
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 110 PLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK--------- 150
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-Y 261
++DF L + + V+ + E+ T YR+ E+L+G Y
Sbjct: 151 ------LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGCKYY 188
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
A DIWS C+ E+ T LF + + D L I +G P EV+ G ++
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSM 241
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAA 378
+ P + W + +SK D L MLH + R SA
Sbjct: 242 PDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 286
Query: 379 DCLRHPWLN 387
L HP+
Sbjct: 287 AALAHPFFQ 295
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 151/369 (40%), Gaps = 88/369 (23%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVG 82
F + + K+G G + V+ + + VALK ++ D + TA EI LLK +
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 67
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ +++LL+ I++ N + +VFE + +L + + S GI +
Sbjct: 68 HPN--------------IVKLLD--VIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPL 109
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 110 PLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK--------- 150
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-Y 261
++DF L + + V+ + E+ T YR+ E+L+G Y
Sbjct: 151 ------LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGXKYY 188
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
A DIWS C+ E+ T LF + + D L I +G P EV+ G ++
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSM 241
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAA 378
+ P + W + +SK D L MLH + R SA
Sbjct: 242 PDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 286
Query: 379 DCLRHPWLN 387
L HP+
Sbjct: 287 AALAHPFFQ 295
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 154/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 1 GHMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + + S G
Sbjct: 59 ELNHPN--------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTG 100
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------ 144
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 145 ---------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGC 179
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 232
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 233 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 277
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 278 SAKAALAHPFFQ 289
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 111/267 (41%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKS 85
+Y I K+G G + V+ + VA+K + D V A EI +LK + +
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
L+N +++ R + +VFE + +L + R +G+ V
Sbjct: 64 -----------------LVNLLEVFRRK-RRLHLVFEYCDHTVLHELDRYQ-RGVPEHLV 104
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++I Q L+ +N+ H IH D+KPENIL+ TKH I
Sbjct: 105 KSITWQTLQAVNFCHKH-NCIHRDVKPENILI--------------TKHSVI-------- 141
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIG-AGY 261
K+ D G A + D++ DE+ TR YRS E+L+G Y
Sbjct: 142 ---------------------KLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 262 GPAADIWSTACMAFELATGDYLFDPKA 288
GP D+W+ C+ EL +G L+ K+
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKS 207
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 64 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 143
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 144 --LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 238
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 239 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 383 HPWLN 387
HP+
Sbjct: 284 HPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 63 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 105
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 142
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 143 --LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 237
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 238 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 383 HPWLN 387
HP+
Sbjct: 283 HPFFQ 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 64 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 143
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 144 --LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 238
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 239 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 383 HPWLN 387
HP+
Sbjct: 284 HPFFQ 288
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 63 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 105
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 142
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 143 --LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 237
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 238 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 383 HPWLN 387
HP+
Sbjct: 283 HPFFQ 287
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 64 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 143
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 144 --LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 238
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 239 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 383 HPWLN 387
HP+
Sbjct: 284 HPFFQ 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 63 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 105
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 142
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 143 --LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 237
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 238 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 383 HPWLN 387
HP+
Sbjct: 283 HPFFQ 287
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 64 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 143
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 144 --LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 238
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 239 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 383 HPWLN 387
HP+
Sbjct: 284 HPFFQ 288
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 63 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 105
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 142
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 143 --LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 237
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 238 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 383 HPWLN 387
HP+
Sbjct: 283 HPFFQ 287
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 64 -------------IVKLLD--VIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 143
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 144 --LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGXKYYSTAV 185
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 238
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 239 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 383 HPWLN 387
HP+
Sbjct: 284 HPFFQ 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 64 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 143
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 144 --LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 238
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 239 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 383 HPWLN 387
HP+
Sbjct: 284 HPFFQ 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 64 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 143
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 144 --LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 238
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 239 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 383 HPWLN 387
HP+
Sbjct: 284 HPFFQ 288
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 148/365 (40%), Gaps = 84/365 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
R +R +G G + +V ++D + + VA+K + ++A E+ LLK +
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH-- 86
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
E VI LL+ F + + + + +V +MG +L ++ H+Q
Sbjct: 87 ------------ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQ 134
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 135 ---FLVYQLLRGLKYIHS-AGIIHRDLKPSNVAV-------------------------- 164
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYG 262
NE D ++I D G A D+ + TR YR+ E+++ Y
Sbjct: 165 ---------------NE--DSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
DIWS C+ EL G LF G +Y D L I+E+VG EVL++
Sbjct: 208 QTVDIWSVGCIMAELLQGKALF---PGSDYI---DQLKRIMEVVGTPSPEVLAK------ 255
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
+ + I +L P + L+ + + A D L ML ++ R SAA+ L
Sbjct: 256 -ISSEHARTYIQSLPPMP-QKDLSSIFRGANPLA---IDLLGRMLVLDSDQRVSAAEALA 310
Query: 383 HPWLN 387
H + +
Sbjct: 311 HAYFS 315
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 153/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 3 GSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + S G
Sbjct: 61 ELNHPN--------------IVKLLD--VIHTEN--KLYLVFEFLHQDLKTFMDASALTG 102
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------ 146
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 147 ---------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGC 181
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 234
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 235 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 279
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 280 SAKAALAHPFFQ 291
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 154/372 (41%), Gaps = 90/372 (24%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLK 79
G + NF+ + K+G G + V+ + + VALK ++ D + TA EI LLK
Sbjct: 3 GSMENFQK--VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + +++LL+ I++ N + +VFE + +L + + S G
Sbjct: 61 ELNHPN--------------IVKLLD--VIHTEN--KLYLVFEHVDQDLKKFMDASALTG 102
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + +++ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------ 146
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF L + + V+ + E+ T YR+ E+L+G
Sbjct: 147 ---------LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGC 181
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ T LF + + D L I +G P EV+ G
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGV 234
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRA 375
++ + P + W + +SK D L MLH + R
Sbjct: 235 TSMPDYKP--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 279
Query: 376 SAADCLRHPWLN 387
SA L HP+
Sbjct: 280 SAKAALAHPFFQ 291
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 149/365 (40%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + S GI + ++
Sbjct: 64 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKDFMDASALTGIPLPLIK 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KPEN+L+ + A K
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTE---------GAIK------------- 143
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 144 --LADFGL----ARAFGVPVRT------------YXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 238
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 239 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 383 HPWLN 387
HP+
Sbjct: 284 HPFFQ 288
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 148/365 (40%), Gaps = 84/365 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
R +R +G G + +V ++D + + VA+K + ++A E+ LLK +
Sbjct: 21 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH-- 78
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
E VI LL+ F + + + + +V +MG +L ++ H+Q
Sbjct: 79 ------------ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ 126
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 127 ---FLVYQLLRGLKYIHS-AGIIHRDLKPSNVAV-------------------------- 156
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYG 262
NE D ++I D G A D+ + TR YR+ E+++ Y
Sbjct: 157 ---------------NE--DCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
DIWS C+ EL G LF G +Y D L I+E+VG EVL++
Sbjct: 200 QTVDIWSVGCIMAELLQGKALF---PGSDYI---DQLKRIMEVVGTPSPEVLAK------ 247
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
+ + I +L P + L+ + + A D L ML ++ R SAA+ L
Sbjct: 248 -ISSEHARTYIQSLPPMP-QKDLSSIFRGANPLA---IDLLGRMLVLDSDQRVSAAEALA 302
Query: 383 HPWLN 387
H + +
Sbjct: 303 HAYFS 307
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 151/365 (41%), Gaps = 84/365 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
R +R +G G + +V ++D + + VA+K + ++A E+ LLK +
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH-- 86
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
E VI LL+ F + + + + +V +MG +L ++ + + +
Sbjct: 87 ------------ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV---KCQALSDE 131
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+V+ ++ Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 132 HVQFLVYQLLRGLKYIHS-AGIIHRDLKPSNVAV-------------------------- 164
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYG 262
NE D ++I D G A D+ + TR YR+ E+++ Y
Sbjct: 165 ---------------NE--DSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
DIWS C+ EL G LF G +Y D L I+E+VG EVL++
Sbjct: 208 QTVDIWSVGCIMAELLQGKALF---PGSDYI---DQLKRIMEVVGTPSPEVLAK------ 255
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
+ + I +L P + L+ + + A D L ML ++ R SAA+ L
Sbjct: 256 -ISSEHARTYIQSLPPMP-QKDLSSIFRGANPLA---IDLLGRMLVLDSDQRVSAAEALA 310
Query: 383 HPWLN 387
H + +
Sbjct: 311 HAYFS 315
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 69/291 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDK-TFVALKIVK----SDQVYADTARDEIVLLKAVGR 83
+Y + ++G G + V+ + DL++ FVALK V+ + + T R E+ +L+ +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHL-- 68
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNG--THICMVFEVMGYNLLRLIARSDYKGIH 141
T V+RL D SR T + +VFE + +L + + G+
Sbjct: 69 ---------ETFEHPNVVRLF-DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ ++ ++ Q+L GL++LH+ R++H D+KP+NIL+ T +I
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILV--------------TSSGQI---- 159
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
++DF L +Y + + + W YR+ EVL+ + Y
Sbjct: 160 ------KLADFGL----ARIYSFQMALTSVVVTLW-------------YRAPEVLLQSSY 196
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312
D+WS C+ E+ LF S D D L I++++G +P E
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLF------RGSSDVDQLGKILDVIG-LPGE 240
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 148/363 (40%), Gaps = 82/363 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G + TV+ + + + VALK V+ D+ +A EI LLK + K+
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
++RL + + + +VFE +L + + + + V
Sbjct: 63 --------------IVRLHDVL----HSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIV 103
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++ + Q+L+GL + H++ ++H D+KP+N+L+ ++ G
Sbjct: 104 KSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLI-----------------NRNG------- 138
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPA 264
+ ++DF L + I V+ ++ E+ T YR +VL GA Y +
Sbjct: 139 ELKLADFGL----ARAFGIPVRC------------YSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
D+WS C+ ELA P G + DD L I L+G +E K Y
Sbjct: 183 IDMWSAGCIFAELANAARPLFP--GNDV---DDQLKRIFRLLGTPTEEQWPSMTKLPDY- 236
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
KP+ +Y T + + D L +L N R SA + L+HP
Sbjct: 237 ------------KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284
Query: 385 WLN 387
+ +
Sbjct: 285 YFS 287
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 69/291 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDK-TFVALKIVK----SDQVYADTARDEIVLLKAVGR 83
+Y + ++G G + V+ + DL++ FVALK V+ + + T R E+ +L+ +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHL-- 68
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNG--THICMVFEVMGYNLLRLIARSDYKGIH 141
T V+RL D SR T + +VFE + +L + + G+
Sbjct: 69 ---------ETFEHPNVVRLF-DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ ++ ++ Q+L GL++LH+ R++H D+KP+NIL+ T +I
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILV--------------TSSGQI---- 159
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
++DF L +Y + + + W YR+ EVL+ + Y
Sbjct: 160 ------KLADFGL----ARIYSFQMALTSVVVTLW-------------YRAPEVLLQSSY 196
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312
D+WS C+ E+ LF S D D L I++++G +P E
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLF------RGSSDVDQLGKILDVIG-LPGE 240
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 69/291 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDK-TFVALKIVK----SDQVYADTARDEIVLLKAVGR 83
+Y + ++G G + V+ + DL++ FVALK V+ + + T R E+ +L+ +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHL-- 68
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNG--THICMVFEVMGYNLLRLIARSDYKGIH 141
T V+RL D SR T + +VFE + +L + + G+
Sbjct: 69 ---------ETFEHPNVVRLF-DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ ++ ++ Q+L GL++LH+ R++H D+KP+NIL+ T +I
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILV--------------TSSGQI---- 159
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
++DF L +Y + + + W YR+ EVL+ + Y
Sbjct: 160 ------KLADFGL----ARIYSFQMALTSVVVTLW-------------YRAPEVLLQSSY 196
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312
D+WS C+ E+ LF S D D L I++++G +P E
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLF------RGSSDVDQLGKILDVIG-LPGE 240
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 149/365 (40%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VAL ++ D + TA EI LLK + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 64 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 143
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 144 --LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 238
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 239 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 383 HPWLN 387
HP+
Sbjct: 284 HPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 149/365 (40%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VAL ++ D + TA EI LLK + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + + S GI + ++
Sbjct: 63 -------------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIK 105
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 142
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 143 --LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 237
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 238 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 383 HPWLN 387
HP+
Sbjct: 283 HPFFQ 287
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 150/364 (41%), Gaps = 84/364 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G + TV+ + + + VALK V+ D+ +A EI LLK + K+
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
++RL + + + +VFE +L + + + + V
Sbjct: 63 --------------IVRLHDVL----HSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIV 103
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++ + Q+L+GL + H++ ++H D+KP+N+L+ ++ G
Sbjct: 104 KSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLI-----------------NRNG------- 138
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPA 264
+ +++F L + I V+ ++ E+ T YR +VL GA Y +
Sbjct: 139 ELKLANFGL----ARAFGIPVRC------------YSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 265 ADIWSTACMAFELA-TGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
D+WS C+ ELA G LF G + DD L I L+G +E K Y
Sbjct: 183 IDMWSAGCIFAELANAGRPLF---PGNDV---DDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
KP+ +Y T + + D L +L N R SA + L+H
Sbjct: 237 -------------KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283
Query: 384 PWLN 387
P+ +
Sbjct: 284 PYFS 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 149/365 (40%), Gaps = 88/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+++LL+ I++ N + +VFE + +L + S GI + ++
Sbjct: 63 -------------IVKLLD--VIHTENKLY--LVFEHVHQDLKTFMDASALTGIPLPLIK 105
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H+ R++H D+KP+N+L+ + A K
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE---------GAIK------------- 142
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAA 265
++DF L + + V+ + E+ T YR+ E+L+G Y A
Sbjct: 143 --LADFGL----ARAFGVPVRT------------YTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ T LF + + D L I +G P EV+ G ++ +
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK 237
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA---SDFADFLLPMLHVNQKLRASAADCLR 382
P + W + +SK D L MLH + R SA L
Sbjct: 238 P--------SFPKWA-------RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 383 HPWLN 387
HP+
Sbjct: 283 HPFFQ 287
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 144/363 (39%), Gaps = 82/363 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPA 264
NE D +KI D G A DD + TR YR+ E+++ A Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
DIWS C+ EL TG LF G ++ D L I+ LVG + G + L+
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVG-------TPGAELLKKI 250
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADCLRH 383
+ + I +L Q+ + A+ A D L ML ++ R +AA L H
Sbjct: 251 SSESARNYIQSLT-----QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 384 PWL 386
+
Sbjct: 306 AYF 308
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 110/253 (43%), Gaps = 61/253 (24%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALK-IVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNT 94
LG G + V+ DL ++ +A+K I + D Y+ +EI L K + K+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN--------- 80
Query: 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI---IKQ 151
+++ L F S NG + +V G +L L+ RS + G N +TI KQ
Sbjct: 81 -----IVQYLGSF---SENGFIKIFMEQVPGGSLSALL-RSKW-GPLKDNEQTIGFYTKQ 130
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
+LEGL YLH +I+H DIK +N+L+ Y V +++ T G
Sbjct: 131 ILEGLKYLHDN-QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAG------------- 175
Query: 212 FSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTA 271
++P E + +++ + A EI + R GYG AADIWS
Sbjct: 176 ---INPCTETFTGTLQ------------YMAPEIIDKGPR--------GYGKAADIWSLG 212
Query: 272 CMAFELATGDYLF 284
C E+ATG F
Sbjct: 213 CTIIEMATGKPPF 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 109/252 (43%), Gaps = 59/252 (23%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALK-IVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNT 94
LG G + V+ DL ++ +A+K I + D Y+ +EI L K + K+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN--------- 66
Query: 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI--HIQNVRTIIKQV 152
+++ L F S NG + +V G +L L+ RS + + + Q + KQ+
Sbjct: 67 -----IVQYLGSF---SENGFIKIFMEQVPGGSLSALL-RSKWGPLKDNEQTIGFYTKQI 117
Query: 153 LEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDF 212
LEGL YLH +I+H DIK +N+L+ Y V +++ T G
Sbjct: 118 LEGLKYLHDN-QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAG-------------- 161
Query: 213 SLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTAC 272
++P E + +++ + A EI + R GYG AADIWS C
Sbjct: 162 --INPCTETFTGTLQ------------YMAPEIIDKGPR--------GYGKAADIWSLGC 199
Query: 273 MAFELATGDYLF 284
E+ATG F
Sbjct: 200 TIIEMATGKPPF 211
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 119/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD A + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 119/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD A + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKXQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKXQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 119/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 79 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 124
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 125 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 154
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD A + TR YR+ E+++ Y
Sbjct: 155 -------------NE--DCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQT 199
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 200 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 245
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 146/363 (40%), Gaps = 82/363 (22%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSN 86
Y ++ +G G + V + D + VA+K + +++A A E+ LLK + R N
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHEN 85
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V E L+DF T +V MG +L +L+ ++ + ++
Sbjct: 86 VIGLLDVFTPDET----LDDF-------TDFYLVMPFMGTDLGKLMK---HEKLGEDRIQ 131
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
++ Q+L+GL Y+H IIH D+KP N+ +
Sbjct: 132 FLVYQMLKGLRYIHA-AGIIHRDLKPGNLAV----------------------------- 161
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAA 265
NE D +KI D G A D + TR YR+ EV++ Y
Sbjct: 162 ------------NE--DCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTV 207
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ TG LF G ++ D L I+++ G P E + + L+
Sbjct: 208 DIWSVGCIMAEMITGKTLF---KGSDHL---DQLKEIMKVTGTPPAEFVQR----LQSDE 257
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADCLRHP 384
+ + + L+ +LT AS A + L ML ++ + R +A + L HP
Sbjct: 258 AKNYMKGLPELEKKDFASILT--------NASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309
Query: 385 WLN 387
+
Sbjct: 310 YFE 312
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 143/363 (39%), Gaps = 82/363 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 106 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 151
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 152 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 181
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 182 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 226
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
DIWS C+ EL TG LF G ++ D L I+ LVG + G + L+
Sbjct: 227 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVG-------TPGAELLKKI 273
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADCLRH 383
+ + I +L Q+ + A+ A D L ML ++ R +AA L H
Sbjct: 274 SSESARNYIQSLT-----QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 328
Query: 384 PWL 386
+
Sbjct: 329 AYF 331
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 88 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 133
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 134 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 163
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 164 -------------NE--DXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 209 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 254
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 145/367 (39%), Gaps = 90/367 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK-IVKSDQ--VYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + K Q ++A E+ LLK + ++
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 95 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 140
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 141 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 170
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 171 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
DIWS C+ EL TG LF G ++ D L I+ LVG E+L
Sbjct: 216 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELL---------- 259
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAE----ASDFA-DFLLPMLHVNQKLRASAAD 379
++I + Q LT+ + A A+ A D L ML ++ R +AA
Sbjct: 260 ------KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 380 CLRHPWL 386
L H +
Sbjct: 314 ALAHAYF 320
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 103 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 148
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 149 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 178
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 179 -------------NE--DCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQT 223
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 224 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 269
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 95 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 140
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 141 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 170
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 171 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 216 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 261
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 95 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 140
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 141 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 170
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 171 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 216 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 261
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 89 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 134
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 135 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 164
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 165 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 210 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 255
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 116/294 (39%), Gaps = 73/294 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH-- 86
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
E VI LL+ F + +V +MG +L ++ H+Q
Sbjct: 87 ------------ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 134
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 135 ---FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV-------------------------- 164
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYG 262
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 165 ---------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 255
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 85 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 130
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 131 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 160
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 161 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 206 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 251
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 94 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 139
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 140 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 169
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 170 -------------NE--DXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 214
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 215 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 260
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 143/363 (39%), Gaps = 82/363 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 103 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 148
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 149 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 178
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 179 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 223
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
DIWS C+ EL TG LF G ++ D L I+ LVG + G + L+
Sbjct: 224 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVG-------TPGAELLKKI 270
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADCLRH 383
+ + I +L Q+ + A+ A D L ML ++ R +AA L H
Sbjct: 271 SSESARNYIQSLT-----QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 325
Query: 384 PWL 386
+
Sbjct: 326 AYF 328
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 80 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 125
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 126 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 155
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 156 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 200
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 201 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 246
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 102 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 147
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 148 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 177
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 178 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 222
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 223 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 268
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 88 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 133
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 134 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 163
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 164 -------------NE--DXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 209 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 254
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 81 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 126
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 127 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 156
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 157 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 202 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 247
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 146/370 (39%), Gaps = 90/370 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSN 86
RY ++ +G G + V ++D KT VA+K + Q Y EI +L R N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRF-RHEN 102
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V +AS + + D + +V ++M +L +L+ HI
Sbjct: 103 VIGIRDILRAS--TLEAMRD----------VYIVQDLMETDLYKLLKSQQLSNDHIC--- 147
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+L GL Y+H+ ++H D+KP N+L+ + D
Sbjct: 148 YFLYQILRGLKYIHS-ANVLHRDLKPSNLLINT------------------------TCD 182
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GYG 262
+ DF L +IAD + DH + + TR YR+ E+++ + GY
Sbjct: 183 LKICDFGL-----------ARIADPEH-----DHTGFLTEXVATRWYRAPEIMLNSKGYT 226
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
+ DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 227 KSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNC------ 274
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYH--WSK---AEASDFADFLLPMLHVNQKLRASA 377
I N+K Q L K W+K S D L ML N R +
Sbjct: 275 ----------IINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITV 324
Query: 378 ADCLRHPWLN 387
+ L HP+L
Sbjct: 325 EEALAHPYLE 334
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 88 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 133
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 134 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 163
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 164 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 209 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 254
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 94 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 139
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 140 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 169
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 170 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 214
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 215 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 260
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 85 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 130
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 131 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 160
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 161 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 206 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 251
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 119/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ + H+Q
Sbjct: 79 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCAKLTDDHVQ-- 124
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 125 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 154
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 155 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 200 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 245
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 85 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 130
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 131 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 160
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 161 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 206 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 251
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 143/363 (39%), Gaps = 82/363 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
DIWS C+ EL TG LF G ++ D L I+ LVG + G + L+
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVG-------TPGAELLKKI 250
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADCLRH 383
+ + I +L Q+ + A+ A D L ML ++ R +AA L H
Sbjct: 251 SSESARNYIQSLT-----QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 384 PWL 386
+
Sbjct: 306 AYF 308
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 90 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 135
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 136 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 165
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 166 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 211 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 256
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 79 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 124
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 125 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 154
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 155 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 200 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 245
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 88 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 133
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 134 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 163
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 164 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 209 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 254
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 80 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 125
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 126 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 155
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 156 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 200
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 201 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 246
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 82 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 127
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 128 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 157
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 158 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 202
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 203 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 248
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 103 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 148
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 149 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 178
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 179 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 223
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 224 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 269
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 102 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 147
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 148 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 177
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 178 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 222
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 223 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 268
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 85 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 130
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 131 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 160
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 161 -------------NE--DSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 206 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 251
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 116/294 (39%), Gaps = 73/294 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH-- 86
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
E VI LL+ F + +V +MG +L ++ H+Q
Sbjct: 87 ------------ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 134
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 135 ---FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV-------------------------- 164
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYG 262
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 165 ---------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 255
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 79 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 124
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 125 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 154
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 155 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 200 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 245
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 106 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 151
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 152 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 181
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 182 -------------NE--DCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQT 226
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 227 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 272
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 89 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 134
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 135 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 164
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 165 -------------NE--DSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 210 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 255
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 93 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 138
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 139 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 168
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 169 -------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 213
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 214 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 259
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 117/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKSQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 148/377 (39%), Gaps = 92/377 (24%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
A R N+ N I + D + +V ++M +L +L+
Sbjct: 78 LAF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 124
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L+
Sbjct: 125 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLLL--------------------- 159
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DH---FADEIQTRQYRS 252
+T SD +KI D G A D DH + + TR YR+
Sbjct: 160 --------NTTSD--------------LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 253 VEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
E+++ + GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQ 251
Query: 312 EVLSQG--KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHV 369
E L+ G K Y + ++ PW + + ++A D D ML
Sbjct: 252 EDLNCGINLKARNYLLSLPHKNKV----PW------NRLFPNADSKALDLLD---KMLTF 298
Query: 370 NQKLRASAADCLRHPWL 386
N R L HP+L
Sbjct: 299 NPHKRIEVEQALAHPYL 315
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 117/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI G A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 117/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 90 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 135
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 136 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 165
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A D + TR YR+ E+++ Y
Sbjct: 166 -------------NE--DCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 211 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 256
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 111/256 (43%), Gaps = 49/256 (19%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + LG+G S V L+ DL+D VA+K+++ AD ARD L+ R+ +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR-----ADLARDPSFYLRF--RREAQN 65
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
++A N A ++ + + + + G +V E + LR I ++ + + +
Sbjct: 66 AAALNHPA---IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE-V 121
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
I + LN+ H Q IIH D+KP NIL+ A +A K
Sbjct: 122 IADACQALNFSH-QNGIIHRDVKPANILIS---------ATNAVK--------------- 156
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF I+ IAD GN+ A I T QY S E G +D++
Sbjct: 157 VVDFG----------IARAIADSGNSVX---QTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 269 STACMAFELATGDYLF 284
S C+ +E+ TG+ F
Sbjct: 204 SLGCVLYEVLTGEPPF 219
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V +MG +L +L+
Sbjct: 96 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYLVTHLMGADLYKLLKTQHLS 142
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 143 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 176
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 177 --LNTTXDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 221
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 275
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 276 INLKARNYLLSLPHKNKV----PW------NRLFPNADSKALDLLD---KMLTFNPHKRI 322
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 323 EVEQALAHPYL 333
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 117/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 90 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 135
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 136 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 165
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A D + TR YR+ E+++ Y
Sbjct: 166 -------------NE--DCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 211 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 256
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 117/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 90 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 135
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 136 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 165
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D G A D + TR YR+ E+++ Y
Sbjct: 166 -------------NE--DCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 211 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 256
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 49/256 (19%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + LG+G S V L+ DL+D VA+K+++ AD ARD L+ R+ +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR-----ADLARDPSFYLRF--RREAQN 65
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
++A N A ++ + + + + G +V E + LR I ++ + + +
Sbjct: 66 AAALNHPA---IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE-V 121
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
I + LN+ H Q IIH D+KP NI++ A +A K
Sbjct: 122 IADACQALNFSH-QNGIIHRDVKPANIMIS---------ATNAVK--------------- 156
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF I+ IAD GN+ A I T QY S E G +D++
Sbjct: 157 VMDFG----------IARAIADSGNSVT---QTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 269 STACMAFELATGDYLF 284
S C+ +E+ TG+ F
Sbjct: 204 SLGCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 49/256 (19%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + LG+G S V L+ DL+D VA+K+++ AD ARD L+ R+ +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR-----ADLARDPSFYLRF--RREAQN 65
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
++A N A ++ + + + + G +V E + LR I ++ + + +
Sbjct: 66 AAALNHPA---IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE-V 121
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
I + LN+ H Q IIH D+KP NI++ A +A K
Sbjct: 122 IADACQALNFSH-QNGIIHRDVKPANIMIS---------ATNAVK--------------- 156
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF I+ IAD GN+ A I T QY S E G +D++
Sbjct: 157 VMDFG----------IARAIADSGNSVT---QTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 269 STACMAFELATGDYLF 284
S C+ +E+ TG+ F
Sbjct: 204 SLGCVLYEVLTGEPPF 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 117/292 (40%), Gaps = 69/292 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK + ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ T A R L +F + +V +MG +L ++ H+Q
Sbjct: 83 VIGLLDVFTPA-----RSLEEF-------NDVYLVTHLMGADLNNIVKCQKLTDDHVQ-- 128
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 129 -FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV---------------------------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D +KI D A DD + TR YR+ E+++ Y
Sbjct: 159 -------------NE--DCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 204 VDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK 249
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 145/371 (39%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
A R N+ N I + D + +V ++M +L +L+
Sbjct: 78 LAF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 124
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 125 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 158
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 159 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 203
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 257
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 258 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 304
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 305 EVEQALAHPYL 315
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 153/367 (41%), Gaps = 95/367 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD--TARDEIVLLKAVGRKSNV 87
Y + KLG G ++TV+ VALK ++ + TA E+ LLK + + V
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG--IHIQNV 145
+ ++ +EK + L VFE + +L + + D G I++ NV
Sbjct: 64 --TLHDIIHTEKSLTL----------------VFEYLDKDLKQYL---DDCGNIINMHNV 102
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ + Q+L GL Y H Q +++H D+KP+N+L+ + + +KL
Sbjct: 103 KLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLI----------------NERGELKL---- 141
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPA 264
+DF L I K D +E+ T YR ++L+G+ Y
Sbjct: 142 ----ADFGL----ARAKSIPTKTYD------------NEVVTLWYRPPDILLGSTDYSTQ 181
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE----VLSQGK-K 319
D+W C+ +E+ATG LF S ++ L I ++G +E +LS + K
Sbjct: 182 IDMWGVGCIFYEMATGRPLFPG------STVEEQLHFIFRILGTPTEETWPGILSNEEFK 235
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
T Y P+ Y+ H + + SD AD L +L + R SA D
Sbjct: 236 TYNY--PK--------------YRAEALLSHAPRLD-SDGADLLTKLLQFEGRNRISAED 278
Query: 380 CLRHPWL 386
++HP+
Sbjct: 279 AMKHPFF 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 144/361 (39%), Gaps = 82/361 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKI--VKSDQVYADTARDEIVLLKAVGRKSN 86
+YH + K+G G + V+ + + +TF KI K D+ T EI +LK +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK---- 58
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
HS+ +++L + R + +VFE + +L +L+ + G+ +
Sbjct: 59 -HSN---------IVKLYDVIHTKKR----LVLVFEHLDQDLKKLLDVCE-GGLESVTAK 103
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L G+ Y H + R++H D+KP+N+L + R+ +
Sbjct: 104 SFLLQLLNGIAYCHDR-RVLHRDLKPQNLL----------INREG--------------E 138
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPAA 265
++DF L + I V+ + EI T YR+ +VL+G+ Y
Sbjct: 139 LKIADFGL----ARAFGIPVR------------KYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ G LF + + D L I ++G P L +
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVS------EADQLMRIFRILG-TPNSKNWPNVTELPKYD 235
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385
P NF + L PW + K D L ML ++ R +A L H +
Sbjct: 236 P--NFTVYEPL-PW---------ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
Query: 386 L 386
Sbjct: 284 F 284
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 55/193 (28%)
Query: 119 MVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178
+VFE + + +L + G+ Q V+ + Q++ G+ + H+ IIH DIKPENIL
Sbjct: 101 LVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENIL-- 156
Query: 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSL---LDPANEVYDISVKIADLGNAC 235
+ S + DF L EVYD
Sbjct: 157 ----------------------VSQSGVVKLCDFGFARTLAAPGEVYD------------ 182
Query: 236 WIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSR 294
DE+ TR YR+ E+L+G YG A D+W+ C+ E+ G+ LF +
Sbjct: 183 -------DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS------ 229
Query: 295 DDDHLAHIVELVG 307
D D L HI+ +G
Sbjct: 230 DIDQLYHIMMCLG 242
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 144/361 (39%), Gaps = 82/361 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKI--VKSDQVYADTARDEIVLLKAVGRKSN 86
+YH + K+G G + V+ + + +TF KI K D+ T EI +LK +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK---- 58
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
HS+ +++L + R + +VFE + +L +L+ + G+ +
Sbjct: 59 -HSN---------IVKLYDVIHTKKR----LVLVFEHLDQDLKKLLDVCE-GGLESVTAK 103
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L G+ Y H + R++H D+KP+N+L + R+ +
Sbjct: 104 SFLLQLLNGIAYCHDR-RVLHRDLKPQNLL----------INREG--------------E 138
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPAA 265
++DF L + I V+ + E+ T YR+ +VL+G+ Y
Sbjct: 139 LKIADFGL----ARAFGIPVR------------KYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ G LF + + D L I ++G P L +
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVS------EADQLMRIFRILG-TPNSKNWPNVTELPKYD 235
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385
P NF + L PW + K D L ML ++ R +A L H +
Sbjct: 236 P--NFTVYEPL-PW---------ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
Query: 386 L 386
Sbjct: 284 F 284
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 76 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 122
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 123 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 156
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 157 --LNTTXDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 201
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNXI 255
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 256 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 302
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 303 EVEQALAHPYL 313
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 147/371 (39%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 76 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 122
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L+
Sbjct: 123 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNT------------------- 159
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
+ D + DF L A+ +D + ++ ++ A TR YR+ E+++
Sbjct: 160 -----TXDLKIXDFGLARVADPDHD---------HTGFLTEYVA----TRWYRAPEIMLN 201
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNXI 255
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 256 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 302
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 303 EVEQALAHPYL 313
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 144/361 (39%), Gaps = 82/361 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKI--VKSDQVYADTARDEIVLLKAVGRKSN 86
+YH + K+G G + V+ + + +TF KI K D+ T EI +LK +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK---- 58
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
HS+ +++L + R + +VFE + +L +L+ + G+ +
Sbjct: 59 -HSN---------IVKLYDVIHTKKR----LVLVFEHLDQDLKKLLDVCE-GGLESVTAK 103
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L G+ Y H + R++H D+KP+N+L + R+ +
Sbjct: 104 SFLLQLLNGIAYCHDR-RVLHRDLKPQNLL----------INREG--------------E 138
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPAA 265
++DF L + I V+ + E+ T YR+ +VL+G+ Y
Sbjct: 139 LKIADFGL----ARAFGIPVR------------KYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIWS C+ E+ G LF + + D L I ++G P L +
Sbjct: 183 DIWSVGCIFAEMVNGAPLFPGVS------EADQLMRIFRILG-TPNSKNWPNVTELPKYD 235
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385
P NF + L PW + K D L ML ++ R +A L H +
Sbjct: 236 P--NFTVYEPL-PW---------ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
Query: 386 L 386
Sbjct: 284 F 284
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 80 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 126
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 127 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 160
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 161 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLXEXVATRWYRAPEIMLN 205
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 259
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 260 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 306
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 307 EVEQALAHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 81 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 127
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 128 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 161
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 162 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLXEXVATRWYRAPEIMLN 206
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 260
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 261 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 307
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 308 EVEQALAHPYL 318
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 24 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 83
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 84 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 130
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 131 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 164
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 165 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 209
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 263
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 264 INLKARNYLLSLPHKNKV----PW------NRLFPNADSKALDLLD---KMLTFNPHKRI 310
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 311 EVEQALAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 76 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 122
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 123 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 156
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 157 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 201
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 255
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 256 INLKARNYLLSLPHKNKV----PW------NRLFPNADSKALDLLD---KMLTFNPHKRI 302
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 303 EVEQALAHPYL 313
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 76 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 122
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 123 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 156
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 157 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 201
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 255
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 256 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 302
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 303 EVEQALAHPYL 313
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 96 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 142
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 143 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 176
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 177 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 221
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 275
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 276 INLKARNYLLSLPHKNKV----PW------NRLFPNADSKALDLLD---KMLTFNPHKRI 322
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 323 EVEQALAHPYL 333
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 81 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 127
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 128 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 161
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 162 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 206
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 260
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 261 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 307
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 308 EVEQALAHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 22 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 81
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 82 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 128
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 129 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 162
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 163 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 207
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 261
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 262 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 308
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 309 EVEQALAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 13 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 72
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 73 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 119
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 120 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 153
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 154 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 198
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 252
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 253 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 299
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 300 EVEQALAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 80 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 126
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 127 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 160
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 161 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 205
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 259
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 260 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 306
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 307 EVEQALAHPYL 317
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 80 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 126
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 127 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 160
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 161 --LNTTXDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 205
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 259
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 260 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 306
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 307 EVEQALAHPYL 317
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 78 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 124
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 125 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 158
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 159 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 203
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 257
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 258 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 304
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 305 EVEQALAHPYL 315
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 74 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 120
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 121 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 154
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 155 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 199
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPEQEDLNCI 253
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 254 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 300
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 301 EVEQALAHPYL 311
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 70/285 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY I KLG G + V+ + D VA+K ++ ++ TA E+ LLK + ++
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ + K + + ++FE +L + + ++ + ++ +
Sbjct: 95 II------------------ELKSVIHHNHRLHLIFEYAENDLKKYMDKN--PDVSMRVI 134
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHH--KIGMKLPM 203
++ + Q++ G+N+ H++ R +H D+KP+N+L+ V DA++ KIG
Sbjct: 135 KSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVS---------DASETPVLKIG----- 179
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YG 262
DF L + I ++ F EI T YR E+L+G+ Y
Sbjct: 180 -------DFGL----ARAFGIPIR------------QFTHEIITLWYRPPEILLGSRHYS 216
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG 307
+ DIWS AC+ E+ LF + + D L I E++G
Sbjct: 217 TSVDIWSIACIWAEMLMKTPLFPGDS------EIDQLFKIFEVLG 255
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 74 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 120
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 121 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 154
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 155 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 199
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 253
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 254 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 300
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 301 EVEQALAHPYL 311
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 76 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 122
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 123 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 156
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 157 --LNTTXDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 201
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 255
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 256 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 302
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 303 EVEQALAHPYL 313
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 146/373 (39%), Gaps = 84/373 (22%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D I V ++M +L +L+ K
Sbjct: 80 LRF-RHENI--IGINDIIRAPTIEQMKDVYI----------VQDLMETDLYKLL-----K 121
Query: 139 GIHIQN--VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
H+ N + + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 122 CQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLL-------------------- 160
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
L + D + DF L A+ +D + + + TR YR+ E++
Sbjct: 161 ----LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIM 203
Query: 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ + GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLN 257
Query: 316 Q--GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
K Y + ++ PW + + ++A D D ML N
Sbjct: 258 CIINLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHK 304
Query: 374 RASAADCLRHPWL 386
R L HP+L
Sbjct: 305 RIEVEQALAHPYL 317
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKIL 79
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 80 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 126
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 127 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 160
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 161 --LNTTXDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 205
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS-- 315
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 259
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 260 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 306
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 307 EVEQALAHPYL 317
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 144/371 (38%), Gaps = 80/371 (21%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA++ + Q Y EI +L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKIL 79
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
R N+ N I + D + +V ++M +L +L+
Sbjct: 80 LRF-RHENI--IGINDIIRAPTIEQMKD----------VYIVQDLMETDLYKLLKTQHLS 126
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 127 NDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL---------------------- 160
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L + D + DF L A+ +D + + + TR YR+ E+++
Sbjct: 161 --LNTTCDLKICDFGLARVADPDHDHT-------------GFLTEYVATRWYRAPEIMLN 205
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ- 316
+ GY + DIWS C+ E+ + +F GK Y D L HI+ ++G +E L+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQLNHILGILGSPSQEDLNCI 259
Query: 317 -GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
K Y + ++ PW + + ++A D D ML N R
Sbjct: 260 INLKARNYLLSLPHKNKV----PWN------RLFPNADSKALDLLD---KMLTFNPHKRI 306
Query: 376 SAADCLRHPWL 386
L HP+L
Sbjct: 307 EVEQALAHPYL 317
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 55/250 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + LG G F+TV+ + D VA+K +K + A+D + R +
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLG--HRSEAKD------GINRTALRE 62
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+ +I LL+ F + ++I +VF+ M + L +I + + + +++
Sbjct: 63 IKLLQELSHPNIIGLLDAFG----HKSNISLVFDFMETD-LEVIIKDNSLVLTPSHIKAY 117
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ L+GL YLH Q I+H D+KP N+L+ D + V ++A
Sbjct: 118 MLMTLQGLEYLH-QHWILHRDLKPNNLLL--DENGVLKLA-------------------- 154
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAADI 267
DF L G+ + + ++ TR YR+ E+L GA YG D+
Sbjct: 155 --DFGL-------------AKSFGSP---NRAYXHQVVTRWYRAPELLFGARMYGVGVDM 196
Query: 268 WSTACMAFEL 277
W+ C+ EL
Sbjct: 197 WAVGCILAEL 206
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 134/325 (41%), Gaps = 78/325 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD---TARDEIVLLKAVGRKSN 86
Y + +LG G F+ V + A K +K Q A +R+EI ++ R+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNV 145
H+ VI L + ++ N T + ++ E V G L +A+ + + +
Sbjct: 74 HHN----------VITLHDVYE----NRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ IKQ+L+G+NYLHT+ +I H D+KPENI++ DK + +P
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLL---DK--------------NIPIP--- 156
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGP 263
+K+ D G A I+D F + T ++ + E++ G
Sbjct: 157 -------------------HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 264 AADIWSTACMAFELATG--DYLFDPK-------AGKEYSRDDDHLAHIVELVGPIPKEVL 314
AD+WS + + L +G +L D K Y D++ +H EL +++L
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLL 257
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPW 339
K+T + T Q R PW
Sbjct: 258 V--KETRKRLTIQEALRH-----PW 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 134/325 (41%), Gaps = 78/325 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD---TARDEIVLLKAVGRKSN 86
Y + +LG G F+ V + A K +K Q A +R+EI ++ R+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNV 145
H+ VI L + ++ N T + ++ E V G L +A+ + + +
Sbjct: 74 HHN----------VITLHDVYE----NRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ IKQ+L+G+NYLHT+ +I H D+KPENI++ DK + +P
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLL---DK--------------NIPIP--- 156
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGP 263
+K+ D G A I+D F + T ++ + E++ G
Sbjct: 157 -------------------HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 264 AADIWSTACMAFELATG--DYLFDPK-------AGKEYSRDDDHLAHIVELVGPIPKEVL 314
AD+WS + + L +G +L D K Y D++ +H EL +++L
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLL 257
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPW 339
K+T + T Q R PW
Sbjct: 258 V--KETRKRLTIQEALRH-----PW 275
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 134/325 (41%), Gaps = 78/325 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD---TARDEIVLLKAVGRKSN 86
Y + +LG G F+ V + A K +K Q A +R+EI ++ R+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNV 145
H+ VI L + ++ N T + ++ E V G L +A+ + + +
Sbjct: 74 HHN----------VITLHDVYE----NRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ IKQ+L+G+NYLHT+ +I H D+KPENI++ DK +P+
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLL---DK----------------NIPIP- 156
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGP 263
+K+ D G A I+D F + T ++ + E++ G
Sbjct: 157 -------------------HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 264 AADIWSTACMAFELATG--DYLFDPK-------AGKEYSRDDDHLAHIVELVGPIPKEVL 314
AD+WS + + L +G +L D K Y D++ +H EL +++L
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLL 257
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPW 339
K+T + T Q R PW
Sbjct: 258 V--KETRKRLTIQEALRH-----PW 275
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 49/256 (19%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + LG+G S V L+ DL+ VA+K+++ AD ARD L+ R+ +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR-----ADLARDPSFYLRF--RREAQN 65
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
++A N A ++ + + + + G +V E + LR I ++ + + +
Sbjct: 66 AAALNHPA---IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE-V 121
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
I + LN+ H Q IIH D+KP NI++ A +A K
Sbjct: 122 IADACQALNFSH-QNGIIHRDVKPANIMIS---------ATNAVK--------------- 156
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF I+ IAD GN+ A I T QY S E G +D++
Sbjct: 157 VMDFG----------IARAIADSGNSVT---QTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 269 STACMAFELATGDYLF 284
S C+ +E+ TG+ F
Sbjct: 204 SLGCVLYEVLTGEPPF 219
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 141/367 (38%), Gaps = 110/367 (29%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD---TARDEIVLLKAVGRKSN 86
Y + +LG G F+ V + A K +K Q A +R+EI ++ R+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNV 145
H+ VI L + ++ N T + ++ E V G L +A+ + + +
Sbjct: 74 HHN----------VITLHDVYE----NRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ IKQ+L+G+NYLHT+ +I H D+KPENI++ DK + +P
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLL---DK--------------NIPIP--- 156
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGP 263
+K+ D G A I+D F + T ++ + E++ G
Sbjct: 157 -------------------HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 264 AADIWSTACMAFELATG--DYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
AD+WS + + L +G +L D K + LA+I + +E SQ +
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTK--------QETLANITAVSYDFDEEFFSQTSELA 249
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
+ DF+ +L + R + + L
Sbjct: 250 K--------------------------------------DFIRKLLVKETRKRLTIQEAL 271
Query: 382 RHPWLNP 388
RHPW+ P
Sbjct: 272 RHPWITP 278
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 141/367 (38%), Gaps = 110/367 (29%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD---TARDEIVLLKAVGRKSN 86
Y + +LG G F+ V + A K +K Q A +R+EI ++ R+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNV 145
H+ VI L + ++ N T + ++ E V G L +A+ + + +
Sbjct: 74 HHN----------VITLHDVYE----NRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ IKQ+L+G+NYLHT+ +I H D+KPENI++ DK +P+
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLL---DK----------------NIPIP- 156
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGP 263
+K+ D G A I+D F + T ++ + E++ G
Sbjct: 157 -------------------HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 264 AADIWSTACMAFELATG--DYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
AD+WS + + L +G +L D K + LA+I + +E SQ +
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTK--------QETLANITAVSYDFDEEFFSQTSELA 249
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
+ DF+ +L + R + + L
Sbjct: 250 K--------------------------------------DFIRKLLVKETRKRLTIQEAL 271
Query: 382 RHPWLNP 388
RHPW+ P
Sbjct: 272 RHPWITP 278
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 146/378 (38%), Gaps = 87/378 (23%)
Query: 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA 80
+ G+ Y + +G G F V+ + L + VA+K V D+ + + E+ +++
Sbjct: 33 KTGEQREIAYTNCKVIGNGSFGVVFQA-KLVESDEVAIKKVLQDKRFKNR---ELQIMRI 88
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI 140
V + V A+ +K ++ + +V E + + R A Y +
Sbjct: 89 VKHPNVVDLKAFFYSNGDK------------KDEVFLNLVLEYVPETVYR--ASRHYAKL 134
Query: 141 HIQNVRTIIK----QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
+IK Q+L L Y+H+ I H DIKP+N+L
Sbjct: 135 KQTMPMLLIKLYMYQLLRSLAYIHS-IGICHRDIKPQNLL-------------------- 173
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVE 254
LDP + V +K+ D G+A + + I +R YR+ E
Sbjct: 174 ------------------LDPPSGV----LKLIDFGSAKILIAGEPNVSXICSRYYRAPE 211
Query: 255 VLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
++ GA Y DIWST C+ EL G LF ++G D L I++++G
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI------DQLVEIIKVLG------ 259
Query: 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
+ ++ ++ P + ++P +V + D D + +L
Sbjct: 260 -TPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPR------TPPDAIDLISRLLEYTPSA 312
Query: 374 RASAADCLRHPWLNPRRS 391
R +A + L HP+ + R+
Sbjct: 313 RLTAIEALCHPFFDELRT 330
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 49/256 (19%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + LG+G S V L+ DL+ VA+K+++ AD ARD L+ R+ +
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR-----ADLARDPSFYLRF--RREAQN 82
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
++A N A ++ + + + + G +V E + LR I ++ + + +
Sbjct: 83 AAALNHPA---IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEV 138
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
I + LN+ H Q IIH D+KP NI++ A +A K
Sbjct: 139 IADACQALNFSH-QNGIIHRDVKPANIMIS---------ATNAVK--------------- 173
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF I+ IAD GN+ A I T QY S E G +D++
Sbjct: 174 VMDFG----------IARAIADSGNSVT---QTAAVIGTAQYLSPEQARGDSVDARSDVY 220
Query: 269 STACMAFELATGDYLF 284
S C+ +E+ TG+ F
Sbjct: 221 SLGCVLYEVLTGEPPF 236
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 49/256 (19%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + LG+G S V L+ DL+ VA+K+++ AD ARD L+ R+ +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR-----ADLARDPSFYLRF--RREAQN 65
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
++A N A ++ + + + G +V E + LR I ++ + + +
Sbjct: 66 AAALNHPA---IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEV 121
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
I + LN+ H Q IIH D+KP NI++ A +A K
Sbjct: 122 IADACQALNFSH-QNGIIHRDVKPANIMIS---------ATNAVK--------------- 156
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF I+ IAD GN+ A I T QY S E G +D++
Sbjct: 157 VMDFG----------IARAIADSGNSVT---QTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 269 STACMAFELATGDYLF 284
S C+ +E+ TG+ F
Sbjct: 204 SLGCVLYEVLTGEPPF 219
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 137/365 (37%), Gaps = 106/365 (29%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +LG G F+ V + A K +K Q A + V R+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--------RGVCREEIERE 65
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
+ Q I L+D +Y N T + ++ E V G L +A+ + + + +
Sbjct: 66 VSILRQVLHPNIITLHD--VYE-NRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSF 120
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
IKQ+L+G+NYLHT+ +I H D+KPENI++ DK + +P
Sbjct: 121 IKQILDGVNYLHTK-KIAHFDLKPENIMLL---DK--------------NIPIP------ 156
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGPAAD 266
+K+ D G A I+D F + T ++ + E++ G AD
Sbjct: 157 ----------------HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 267 IWSTACMAFELATG--DYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
+WS + + L +G +L D K + LA+I + +E SQ
Sbjct: 201 MWSIGVITYILLSGASPFLGDTK--------QETLANITAVSYDFDEEFFSQ-------- 244
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADCLRH 383
S+ A DF+ +L + R + + LRH
Sbjct: 245 -------------------------------TSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 384 PWLNP 388
PW+ P
Sbjct: 274 PWITP 278
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 59/272 (21%)
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
+ +V ++M +L ++I S + + +++VR + Q+L GL Y+H+ ++IH D+KP N+L
Sbjct: 135 VYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHS-AQVIHRDLKPSNLL 191
Query: 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW 236
+ + KIG D M+ PA Y ++ +A
Sbjct: 192 V------------NENCELKIG-------DFGMARGLCTSPAEHQYFMTEYVA------- 225
Query: 237 IDDHFADEIQTRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRD 295
TR YR+ E+++ Y A D+WS C+ E+ LF GK Y
Sbjct: 226 ----------TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF---PGKNYVH- 271
Query: 296 DDHLAHIVELVG-PIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKA 354
L I+ ++G P P + + G + +R + I +L P Q + + + A
Sbjct: 272 --QLQLIMMVLGTPSPAVIQAVGAERVRAY--------IQSLPP---RQPVPWETVYPGA 318
Query: 355 EASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
+ + L ML R SAA LRHP+L
Sbjct: 319 DRQALS-LLGRMLRFEPSARISAAAALRHPFL 349
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 59/272 (21%)
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
+ +V ++M +L ++I S + + +++VR + Q+L GL Y+H+ ++IH D+KP N+L
Sbjct: 134 VYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHS-AQVIHRDLKPSNLL 190
Query: 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW 236
+ + KIG D M+ PA Y ++ +A
Sbjct: 191 V------------NENCELKIG-------DFGMARGLCTSPAEHQYFMTEYVA------- 224
Query: 237 IDDHFADEIQTRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRD 295
TR YR+ E+++ Y A D+WS C+ E+ LF GK Y
Sbjct: 225 ----------TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF---PGKNYVH- 270
Query: 296 DDHLAHIVELVG-PIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKA 354
L I+ ++G P P + + G + +R + I +L P Q + + + A
Sbjct: 271 --QLQLIMMVLGTPSPAVIQAVGAERVRAY--------IQSLPPR---QPVPWETVYPGA 317
Query: 355 EASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
+ + L ML R SAA LRHP+L
Sbjct: 318 DRQALS-LLGRMLRFEPSARISAAAALRHPFL 348
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 104/265 (39%), Gaps = 50/265 (18%)
Query: 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168
YS ICM E M G +L +++ ++ I Q + + V++GL YL + +I+H
Sbjct: 74 YSDGEISICM--EHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKI 228
D+KP NIL+ + +K+
Sbjct: 130 DVKPSNILVNSRGE-------------------------------------------IKL 146
Query: 229 ADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPK 287
D G + + D A+ + TR Y S E L G Y +DIWS E+A G Y P
Sbjct: 147 CDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
Query: 288 AGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347
KE SR + +++ + P L G +L + + + L Q++
Sbjct: 207 DAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 266
Query: 348 KY-HWSKAEASDFADFLLPMLHVNQ 371
+ S AE DFA +L + +NQ
Sbjct: 267 AFIKRSDAEEVDFAGWLCSTIGLNQ 291
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 151/371 (40%), Gaps = 84/371 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNV 87
RY ++ LG G V+ + D DK KIV +D A EI +++ + + V
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 88 HS----SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
+Q ++ V L +Y +V E M +L ++ + H
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVY--------IVQEYMETDLANVLEQGPLLEEH-- 121
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
R + Q+L GL Y+H+ ++H D+KP N+ + +
Sbjct: 122 -ARLFMYQLLRGLKYIHS-ANVLHRDLKPANLFINTE----------------------- 156
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------DEIQTRQYRSVEVLI 257
D+ +KI D G A +D H++ + + T+ YRS +L+
Sbjct: 157 -------------------DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL 197
Query: 258 GAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
Y A D+W+ C+ E+ TG LF AG + + + + I+E + P+ E +
Sbjct: 198 SPNNYTKAIDMWAAGCIFAEMLTGKTLF---AG---AHELEQMQLILESI-PVVHE---E 247
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
++ L P + R D +P ++ LT+ EA DF + +L ++ R +
Sbjct: 248 DRQELLSVIPV--YIRNDMTEP---HKPLTQLLPGISREAVDFLEQILTFSPMD---RLT 299
Query: 377 AADCLRHPWLN 387
A + L HP+++
Sbjct: 300 AEEALSHPYMS 310
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 116/306 (37%), Gaps = 76/306 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++R LG G F V+L+ + Q+K +ALK++ Q+ + ++ R+ + S
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL------RREIEIQS 69
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRT 147
+ ++R+ N F + R ++ + F G Y L+ R D Q T
Sbjct: 70 HLRHPN----ILRMYNYF--HDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QRSAT 118
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++++ + L+Y H + ++IH DIKPEN+LM
Sbjct: 119 FMEELADALHYCHER-KVIHRDIKPENLLMG----------------------------- 148
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQYRSVEVLIGAGYGPAAD 266
Y +KIAD G + + T Y E++ G + D
Sbjct: 149 --------------YKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG-----KKTL 321
+W + +E G FD + E R IV + P LS G K L
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSHTETHR------RIVNVDLKFPP-FLSDGSKDLISKLL 247
Query: 322 RYFTPQ 327
RY PQ
Sbjct: 248 RYHPPQ 253
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 119/290 (41%), Gaps = 60/290 (20%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G F V+ + + VALK V + + TA EI +L+ + ++
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 86 NVH-SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
V+ T+AS Y+R I +VF+ ++L L++ K +
Sbjct: 79 VVNLIEICRTKASP-----------YNRCKASIYLVFDFCEHDLAGLLSNVLVK-FTLSE 126
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
++ +++ +L GL Y+H +I+H D+K N+L + D V ++A G+ S
Sbjct: 127 IKRVMQMLLNGLYYIHRN-KILHRDMKAANVL--ITRDGVLKLA-------DFGLARAFS 176
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGP 263
L + + + + T YR E+L+G YGP
Sbjct: 177 LAKNSQ---------------------------PNRYXNRVVTLWYRPPELLLGERDYGP 209
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
D+W C+ E+ T + + + + LA I +L G I EV
Sbjct: 210 PIDLWGAGCIMAEMWTRSPIM------QGNTEQHQLALISQLCGSITPEV 253
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 119/290 (41%), Gaps = 60/290 (20%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G F V+ + + VALK V + + TA EI +L+ + ++
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 86 NVH-SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
V+ T+AS Y+R I +VF+ ++L L++ K +
Sbjct: 79 VVNLIEICRTKASP-----------YNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSE 126
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
++ +++ +L GL Y+H +I+H D+K N+L + D V ++A G+ S
Sbjct: 127 IKRVMQMLLNGLYYIHRN-KILHRDMKAANVL--ITRDGVLKLA-------DFGLARAFS 176
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGP 263
L + + + + T YR E+L+G YGP
Sbjct: 177 LAKNSQ---------------------------PNRYXNRVVTLWYRPPELLLGERDYGP 209
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
D+W C+ E+ T + + + + LA I +L G I EV
Sbjct: 210 PIDLWGAGCIMAEMWTRSPIM------QGNTEQHQLALISQLCGSITPEV 253
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 119/290 (41%), Gaps = 60/290 (20%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G F V+ + + VALK V + + TA EI +L+ + ++
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 86 NVH-SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
V+ T+AS Y+R I +VF+ ++L L++ K +
Sbjct: 78 VVNLIEICRTKASP-----------YNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSE 125
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
++ +++ +L GL Y+H +I+H D+K N+L + D V ++A G+ S
Sbjct: 126 IKRVMQMLLNGLYYIHRN-KILHRDMKAANVL--ITRDGVLKLA-------DFGLARAFS 175
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGP 263
L + + + + T YR E+L+G YGP
Sbjct: 176 LAKNSQ---------------------------PNRYXNRVVTLWYRPPELLLGERDYGP 208
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
D+W C+ E+ T + + + + LA I +L G I EV
Sbjct: 209 PIDLWGAGCIMAEMWTRSPIM------QGNTEQHQLALISQLCGSITPEV 252
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 119/290 (41%), Gaps = 60/290 (20%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G F V+ + + VALK V + + TA EI +L+ + ++
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 86 NVH-SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
V+ T+AS Y+R I +VF+ ++L L++ K +
Sbjct: 79 VVNLIEICRTKASP-----------YNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSE 126
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
++ +++ +L GL Y+H +I+H D+K N+L + D V ++A G+ S
Sbjct: 127 IKRVMQMLLNGLYYIHRN-KILHRDMKAANVL--ITRDGVLKLA-------DFGLARAFS 176
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGP 263
L + + + + T YR E+L+G YGP
Sbjct: 177 LAKNSQ---------------------------PNRYXNRVVTLWYRPPELLLGERDYGP 209
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
D+W C+ E+ T + + + + LA I +L G I EV
Sbjct: 210 PIDLWGAGCIMAEMWTRSPIM------QGNTEQHQLALISQLCGSITPEV 253
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 137/371 (36%), Gaps = 115/371 (30%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKA 80
+F+ RY R LG G F V L D A+K++ QV T ++ E+ LLK
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 88
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV-MGYNLL-RLIARSDYK 138
+ + +++L F+ + + +V EV G L +I+R +
Sbjct: 89 LDHPN--------------IMKLYEFFE----DKGYFYLVGEVYTGGELFDEIISRKRFS 130
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + II+QVL G+ Y+H +I+H D+KPEN+L+
Sbjct: 131 EV---DAARIIRQVLSGITYMHKN-KIVHRDLKPENLLL--------------------- 165
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVL 256
++ D +++I D G + + D+I T Y + EVL
Sbjct: 166 -------------------ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 206
Query: 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
G Y D+WST + + L +G F+ EY I K+V +
Sbjct: 207 HGT-YDEKCDVWSTGVILYILLSGCPPFN--GANEYD---------------ILKKV-EK 247
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
GK T PQ W K S D + ML +R S
Sbjct: 248 GKYTFE--LPQ-----------------------WKKVSESA-KDLIRKMLTYVPSMRIS 281
Query: 377 AADCLRHPWLN 387
A D L H W+
Sbjct: 282 ARDALDHEWIQ 292
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 99/261 (37%), Gaps = 67/261 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y +++ LG G F V L++ VALKI+ K V KS++
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN----------------KKVLAKSDMQG 49
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ +++R + K+Y ++ I MV E G L I + D + Q R
Sbjct: 50 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARR 107
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q++ + Y H +I+H D+KPEN+L+ +H
Sbjct: 108 FFQQIISAVEYCHRH-KIVHRDLKPENLLL--------------DEH------------- 139
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY-GPA 264
++VKIAD G + + D + Y + EV+ G Y GP
Sbjct: 140 ----------------LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 183
Query: 265 ADIWSTACMAFELATGDYLFD 285
D+WS + + + FD
Sbjct: 184 VDVWSCGVILYVMLCRRLPFD 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 99/261 (37%), Gaps = 67/261 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y +++ LG G F V L++ VALKI+ K V KS++
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN----------------KKVLAKSDMQG 53
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ +++R + K+Y ++ I MV E G L I + D + Q R
Sbjct: 54 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARR 111
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q++ + Y H +I+H D+KPEN+L+ +H
Sbjct: 112 FFQQIISAVEYCHRH-KIVHRDLKPENLLL--------------DEH------------- 143
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY-GPA 264
++VKIAD G + + D + Y + EV+ G Y GP
Sbjct: 144 ----------------LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 187
Query: 265 ADIWSTACMAFELATGDYLFD 285
D+WS + + + FD
Sbjct: 188 VDVWSCGVILYVMLCRRLPFD 208
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 139/371 (37%), Gaps = 115/371 (30%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKA 80
+F+ RY R LG G F V L D A+K++ QV T ++ E+ LLK
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 106
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV-MGYNLL-RLIARSDYK 138
+ + +++L ++ + G + +V EV G L +I+R +
Sbjct: 107 LDHPN--------------IMKL---YEFFEDKG-YFYLVGEVYTGGELFDEIISRKRFS 148
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + II+QVL G+ Y+H + +I+H D+KPEN+L+
Sbjct: 149 EV---DAARIIRQVLSGITYMH-KNKIVHRDLKPENLLL--------------------- 183
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVL 256
++ D +++I D G + + D+I T Y + EVL
Sbjct: 184 -------------------ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 224
Query: 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
G Y D+WST + + L +G F+ EY I K+V +
Sbjct: 225 HGT-YDEKCDVWSTGVILYILLSGCPPFN--GANEYD---------------ILKKV-EK 265
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
GK T PQ W K S D + ML +R S
Sbjct: 266 GKYTFEL--PQ-----------------------WKKVSES-AKDLIRKMLTYVPSMRIS 299
Query: 377 AADCLRHPWLN 387
A D L H W+
Sbjct: 300 ARDALDHEWIQ 310
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 139/371 (37%), Gaps = 115/371 (30%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKA 80
+F+ RY R LG G F V L D A+K++ QV T ++ E+ LLK
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 105
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV-MGYNLL-RLIARSDYK 138
+ + +++L ++ + G + +V EV G L +I+R +
Sbjct: 106 LDHPN--------------IMKL---YEFFEDKG-YFYLVGEVYTGGELFDEIISRKRFS 147
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + II+QVL G+ Y+H + +I+H D+KPEN+L+
Sbjct: 148 EV---DAARIIRQVLSGITYMH-KNKIVHRDLKPENLLL--------------------- 182
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVL 256
++ D +++I D G + + D+I T Y + EVL
Sbjct: 183 -------------------ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 223
Query: 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
G Y D+WST + + L +G F+ EY I K+V +
Sbjct: 224 HGT-YDEKCDVWSTGVILYILLSGCPPFN--GANEYD---------------ILKKV-EK 264
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
GK T PQ W K S D + ML +R S
Sbjct: 265 GKYTFEL--PQ-----------------------WKKVSES-AKDLIRKMLTYVPSMRIS 298
Query: 377 AADCLRHPWLN 387
A D L H W+
Sbjct: 299 ARDALDHEWIQ 309
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 99/261 (37%), Gaps = 67/261 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y +++ LG G F V L++ VALKI+ K V KS++
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN----------------KKVLAKSDMQG 58
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ +++R + K+Y ++ I MV E G L I + D + Q R
Sbjct: 59 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARR 116
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q++ + Y H +I+H D+KPEN+L+ +H
Sbjct: 117 FFQQIISAVEYCHRH-KIVHRDLKPENLLL--------------DEH------------- 148
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY-GPA 264
++VKIAD G + + D + Y + EV+ G Y GP
Sbjct: 149 ----------------LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 192
Query: 265 ADIWSTACMAFELATGDYLFD 285
D+WS + + + FD
Sbjct: 193 VDVWSCGVILYVMLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 99/261 (37%), Gaps = 67/261 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y +++ LG G F V L++ VALKI+ K V KS++
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN----------------KKVLAKSDMQG 59
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ +++R + K+Y ++ I MV E G L I + D + Q R
Sbjct: 60 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARR 117
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q++ + Y H +I+H D+KPEN+L+ +H
Sbjct: 118 FFQQIISAVEYCHRH-KIVHRDLKPENLLL--------------DEH------------- 149
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY-GPA 264
++VKIAD G + + D + Y + EV+ G Y GP
Sbjct: 150 ----------------LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 193
Query: 265 ADIWSTACMAFELATGDYLFD 285
D+WS + + + FD
Sbjct: 194 VDVWSCGVILYVMLCRRLPFD 214
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 139/371 (37%), Gaps = 115/371 (30%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKA 80
+F+ RY R LG G F V L D A+K++ QV T ++ E+ LLK
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV-MGYNLL-RLIARSDYK 138
+ + +++L ++ + G + +V EV G L +I+R +
Sbjct: 83 LDHPN--------------IMKL---YEFFEDKG-YFYLVGEVYTGGELFDEIISRKRFS 124
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + II+QVL G+ Y+H + +I+H D+KPEN+L+
Sbjct: 125 EV---DAARIIRQVLSGITYMH-KNKIVHRDLKPENLLL--------------------- 159
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVL 256
++ D +++I D G + + D+I T Y + EVL
Sbjct: 160 -------------------ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 200
Query: 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
G Y D+WST + + L +G F+ EY I K+V +
Sbjct: 201 HGT-YDEKCDVWSTGVILYILLSGCPPFN--GANEYD---------------ILKKV-EK 241
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
GK T PQ W K S D + ML +R S
Sbjct: 242 GKYTFEL--PQ-----------------------WKKVSES-AKDLIRKMLTYVPSMRIS 275
Query: 377 AADCLRHPWLN 387
A D L H W+
Sbjct: 276 ARDALDHEWIQ 286
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 144/398 (36%), Gaps = 106/398 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAV------- 81
+Y + + LG G F V +D++ ALK V D Y + D + +L V
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVD 67
Query: 82 -----------------------GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHIC 118
G+ + V++ + + + LN Y + H
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLH-- 125
Query: 119 MVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178
+L+ RS + I + + I Q+ + ++H+ I H DIKP+N+L+
Sbjct: 126 --------KVLKSFIRSG-RSIPMNLISIYIYQLFRAVGFIHS-LGICHRDIKPQNLLVN 175
Query: 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI- 237
S D+T+ K+ D G+A +
Sbjct: 176 -------------------------SKDNTL-----------------KLCDFGSAKKLI 193
Query: 238 -DDHFADEIQTRQYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRD 295
+ I +R YR+ E+++GA Y P+ D+WS C+ EL G LF +
Sbjct: 194 PSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI----- 248
Query: 296 DDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAE 355
D L I++++G + K+ + P R LK ++L E
Sbjct: 249 -DQLVRIIQIMG-------TPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPE------GT 294
Query: 356 ASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSHY 393
S D L +L LR + + + HP+ + R+ Y
Sbjct: 295 PSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSY 332
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 153/396 (38%), Gaps = 86/396 (21%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G + V+L++D VA+K K ++++ D ++ K + R+ +
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIK--KVNRMFED-----LIDCKRILREITI-- 80
Query: 90 SAYNTQASEKVIRLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
N S+ +IRL +D I + +V E+ +L +L + + Q+V+T
Sbjct: 81 --LNRLKSDYIIRL-HDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEQHVKT 135
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
I+ +L G ++H + IIH D+KP N L+ D
Sbjct: 136 ILYNLLLGEKFIH-ESGIIHRDLKPANCLLNQD------------------------CSV 170
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACW----------IDDHFADEIQTRQYRSVE-VL 256
+ DF L N DI + + DL + + TR YR+ E +L
Sbjct: 171 KICDFGLARTINSDKDIHI-VNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL 229
Query: 257 IGAGYGPAADIWSTACM-----------------AFELATGDYLF----DPKAGKEYSRD 295
+ Y + DIWST C+ F L G F D + K + +
Sbjct: 230 LQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKS 289
Query: 296 D-DHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKA 354
+ D L I ++G P+E L+ T Q + I L P L++KY
Sbjct: 290 NRDQLNIIFNVIGTPPEE-------DLKCITKQEVIKYI-KLFPTRDGIDLSKKYSSISK 341
Query: 355 EASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390
E D L ML N + R + L HP+L R
Sbjct: 342 EG---IDLLESMLRFNAQKRITIDKALSHPYLKDVR 374
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 69/268 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
Y +++ +G G+F+ V L+ + VA+KI+ Q+ + + E+ ++K + +
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V + +EK + L+ + Y+ G EV Y L+A K + R
Sbjct: 74 V--KLFEVIETEKTLYLIME---YASGG-------EVFDY----LVAHGRMKE---KEAR 114
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ +Q++ + Y H Q RI+H D+K EN+L+ DA
Sbjct: 115 SKFRQIVSAVQYCH-QKRIVHRDLKAENLLL------------DA--------------- 146
Query: 207 STMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GP 263
D+++KIAD G N + + Y + E+ G Y GP
Sbjct: 147 ----------------DMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + + L +G FD + KE
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFDGQNLKE 218
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 115/306 (37%), Gaps = 76/306 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q+K +ALK++ Q+ + ++ R+ + S
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL------RREIEIQS 70
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRT 147
+ ++R+ N F + R ++ + F G Y L+ R D Q T
Sbjct: 71 HLRHPN----ILRMYNYF--HDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QRSAT 119
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++++ + L+Y H + ++IH DIKPEN+LM
Sbjct: 120 FMEELADALHYCHER-KVIHRDIKPENLLMG----------------------------- 149
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQYRSVEVLIGAGYGPAAD 266
Y +KIAD G + + T Y E++ G + D
Sbjct: 150 --------------YKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 195
Query: 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG-----KKTL 321
+W + +E G FD + E R IV + P LS G K L
Sbjct: 196 LWCAGVLCYEFLVGMPPFDSPSHTETHR------RIVNVDLKFPP-FLSDGSKDLISKLL 248
Query: 322 RYFTPQ 327
RY PQ
Sbjct: 249 RYHPPQ 254
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 115/306 (37%), Gaps = 76/306 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q+K +ALK++ Q+ + ++ R+ + S
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL------RREIEIQS 69
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRT 147
+ ++R+ N F + R ++ + F G Y L+ R D Q T
Sbjct: 70 HLRHPN----ILRMYNYF--HDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QRSAT 118
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++++ + L+Y H + ++IH DIKPEN+LM
Sbjct: 119 FMEELADALHYCHER-KVIHRDIKPENLLMG----------------------------- 148
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQYRSVEVLIGAGYGPAAD 266
Y +KIAD G + + T Y E++ G + D
Sbjct: 149 --------------YKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG-----KKTL 321
+W + +E G FD + E R IV + P LS G K L
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSHTETHR------RIVNVDLKFPP-FLSDGSKDLISKLL 247
Query: 322 RYFTPQ 327
RY PQ
Sbjct: 248 RYHPPQ 253
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 101/254 (39%), Gaps = 66/254 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ V+ KLG G + +V+ + + VA+K QV ++ EI+ ++ ++ +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIK-----QVPVESDLQEIIKEISIMQQCD--- 82
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
S V++ + Y +N T + +V E G + I R K + + TI+
Sbjct: 83 -------SPHVVKY---YGSYFKN-TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATIL 131
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
+ L+GL YLH R IH DIK NIL+ T+ H
Sbjct: 132 QSTLKGLEYLHF-MRKIHRDIKAGNILL-------------NTEGH-------------- 163
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEVLIGAGYGPAAD 266
K+AD G A + D A I T + + EV+ GY AD
Sbjct: 164 ----------------AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVAD 207
Query: 267 IWSTACMAFELATG 280
IWS A E+A G
Sbjct: 208 IWSLGITAIEMAEG 221
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 69/268 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
Y +++ +G G+F+ V L+ + VA+KI+ Q+ + + E+ ++K + +
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V + +EK + L+ + Y+ G EV Y L+A K + R
Sbjct: 77 V--KLFEVIETEKTLYLIME---YASGG-------EVFDY----LVAHGRMKE---KEAR 117
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ +Q++ + Y H Q RI+H D+K EN+L+ DA
Sbjct: 118 SKFRQIVSAVQYCH-QKRIVHRDLKAENLLL------------DA--------------- 149
Query: 207 STMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GP 263
D+++KIAD G N + Y + E+ G Y GP
Sbjct: 150 ----------------DMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + + L +G FD + KE
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 47/256 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ I LG G F V + + D + A+K ++ + T E++LL ++ + V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT-- 147
A + ++ + K S +F M Y R+ Y IH +N+
Sbjct: 68 YAAWLE-RRNFVKPMTAVKKKS-------TLFIQMEY----CENRTLYDLIHSENLNQQR 115
Query: 148 -----IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ +Q+LE L+Y+H+Q IIH D+KP NI + D +++ KIG
Sbjct: 116 DEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFI------------DESRNVKIG---- 158
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-Y 261
DF L + DI +K+ D N D+ I T Y + EVL G G Y
Sbjct: 159 --------DFGLAKNVHRSLDI-LKL-DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 262 GPAADIWSTACMAFEL 277
D++S + FE+
Sbjct: 209 NEKIDMYSLGIIFFEM 224
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 101/269 (37%), Gaps = 72/269 (26%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 54
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 109
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
T I ++ L+Y H++ R+IH DIKPEN+
Sbjct: 110 RTATYITELANALSYCHSK-RVIHRDIKPENL---------------------------- 140
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-TRQYRSVEVLIGAGYG 262
LL A E +KIAD G +C + T Y E++ G +
Sbjct: 141 ----------LLGSAGE-----LKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + +E G F+ +E
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 130/372 (34%), Gaps = 110/372 (29%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTAR--DEIVLLKAVG 82
F RY+++ LG G F V D + A+K++ K+ DT+ E+ LLK +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ + K+ +L D + +I G +I R +
Sbjct: 80 HPNIM-----------KLFEILED-----SSSFYIVGELYTGGELFDEIIKRKRFSE--- 120
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ IIKQV G+ Y+H I+H D+KPENIL+
Sbjct: 121 HDAARIIKQVFSGITYMHKH-NIVHRDLKPENILL------------------------- 154
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLG-NACWIDD-HFADEIQTRQYRSVEVLIGAG 260
++ D +KI D G + C+ + D I T Y + EVL G
Sbjct: 155 ---------------ESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT- 198
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y D+WS + + L +G F Y +++ + VE GK
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPF-------YGKNEYDILKRVE-----------TGKYA 240
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
+L W + + D D + ML + LR +A C
Sbjct: 241 F-------------DLPQW-------------RTISDDAKDLIRKMLTFHPSLRITATQC 274
Query: 381 LRHPWLNPRRSH 392
L HPW+ S
Sbjct: 275 LEHPWIQKYSSE 286
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 130/372 (34%), Gaps = 110/372 (29%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTAR--DEIVLLKAVG 82
F RY+++ LG G F V D + A+K++ K+ DT+ E+ LLK +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ + K+ +L D + +I G +I R +
Sbjct: 80 HPNIM-----------KLFEILED-----SSSFYIVGELYTGGELFDEIIKRKRFSE--- 120
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ IIKQV G+ Y+H I+H D+KPENIL+
Sbjct: 121 HDAARIIKQVFSGITYMHKH-NIVHRDLKPENILL------------------------- 154
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLG-NACWIDD-HFADEIQTRQYRSVEVLIGAG 260
++ D +KI D G + C+ + D I T Y + EVL G
Sbjct: 155 ---------------ESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT- 198
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y D+WS + + L +G F Y +++ + VE GK
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPF-------YGKNEYDILKRVE-----------TGKYA 240
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
+L W + + D D + ML + LR +A C
Sbjct: 241 F-------------DLPQW-------------RTISDDAKDLIRKMLTFHPSLRITATQC 274
Query: 381 LRHPWLNPRRSH 392
L HPW+ S
Sbjct: 275 LEHPWIQKYSSE 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 64/261 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G + V ++ K VA+K + ++ T+ DE LLK + S H
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDE--LLKEIQAMSQCHH 67
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNV--- 145
+ + V++ + +V +++ G ++L +I KG H V
Sbjct: 68 PNIVSYYTSFVVK------------DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 115
Query: 146 ---RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
TI+++VLEGL YLH + IH D+K NIL+ D
Sbjct: 116 STIATILREVLEGLEYLHKNGQ-IHRDVKAGNILLGEDG--------------------- 153
Query: 203 MSLDSTMSDF---SLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF + L ++ V+ +G CW+ ++++
Sbjct: 154 ---SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR------------- 197
Query: 260 GYGPAADIWSTACMAFELATG 280
GY ADIWS A ELATG
Sbjct: 198 GYDFKADIWSFGITAIELATG 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 64/261 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G + V ++ K VA+K + ++ T+ DE LLK + S H
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDE--LLKEIQAMSQCHH 72
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNV--- 145
+ + V++ + +V +++ G ++L +I KG H V
Sbjct: 73 PNIVSYYTSFVVK------------DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 120
Query: 146 ---RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
TI+++VLEGL YLH + IH D+K NIL+ D
Sbjct: 121 STIATILREVLEGLEYLHKNGQ-IHRDVKAGNILLGEDG--------------------- 158
Query: 203 MSLDSTMSDF---SLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++DF + L ++ V+ +G CW+ ++++
Sbjct: 159 ---SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR------------- 202
Query: 260 GYGPAADIWSTACMAFELATG 280
GY ADIWS A ELATG
Sbjct: 203 GYDFKADIWSFGITAIELATG 223
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 135/326 (41%), Gaps = 69/326 (21%)
Query: 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA 80
++ DLF + + + +GH DK + ALK ++ + R EI LL+
Sbjct: 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDY-ALKQIEGTGISMSACR-EIALLRE 74
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLI-----ARS 135
+ N + +KV D K++ ++F+ ++L +I +++
Sbjct: 75 LKHP--------NVISLQKVFLSHADRKVW--------LLFDYAEHDLWHIIKFHRASKA 118
Query: 136 DYKGIHIQN--VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ K + + V++++ Q+L+G++YLH ++H D+KP NIL+ + + R+
Sbjct: 119 NKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRV------ 171
Query: 194 HHKIG-MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRS 252
KI M +S + + LDP + T YR+
Sbjct: 172 --KIADMGFARLFNSPLKPLADLDPV--------------------------VVTFWYRA 203
Query: 253 VEVLIGA-GYGPAADIWSTACMAFELATGDYLF-----DPKAGKEYSRDDDHLAHIVELV 306
E+L+GA Y A DIW+ C+ EL T + +F D K Y D L I ++
Sbjct: 204 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH--DQLDRIFNVM 261
Query: 307 GPIPKEVLSQGKKTLRYFTPQGNFRR 332
G + KK + T +FRR
Sbjct: 262 GFPADKDWEDIKKMPEHSTLMKDFRR 287
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 109/283 (38%), Gaps = 78/283 (27%)
Query: 14 PGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YAD 69
PG Y + G + Y +RKLG G + V L + + A+K++K Q Y+D
Sbjct: 23 PGMYVRKKEGKIGE-SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSD 81
Query: 70 TARD----------EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICM 119
++ EI LLK++ + +I+L + F+ + ++
Sbjct: 82 DNKNIEKFHEEIYNEISLLKSLDHPN--------------IIKLFDVFE--DKKYFYLVT 125
Query: 120 VFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179
F G ++I R + N I+KQ+L G+ YLH I+H DIKPENI
Sbjct: 126 EFYEGGELFEQIINRHKFDECDAAN---IMKQILSGICYLHKH-NIVHRDIKPENI---- 177
Query: 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI-- 237
LL+ N + +++KI D G + +
Sbjct: 178 ----------------------------------LLENKNSL--LNIKIVDFGLSSFFSK 201
Query: 238 DDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATG 280
D D + T Y + EVL Y D+WS + + L G
Sbjct: 202 DYKLRDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 100/269 (37%), Gaps = 72/269 (26%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 79
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E Y L+ +++ D Q
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 134
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
T I ++ L+Y H++ R+IH DIKPEN+
Sbjct: 135 RTATYITELANALSYCHSK-RVIHRDIKPENL---------------------------- 165
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQYRSVEVLIGAGYG 262
LL A E +KIAD G + D++ T Y E++ G +
Sbjct: 166 ----------LLGSAGE-----LKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHD 210
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + +E G F+ +E
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 117/291 (40%), Gaps = 61/291 (20%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84
LF Y + +G G FS V + + A+KIV + + L +
Sbjct: 21 LFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR----- 75
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNL-LRLIARSDYKGIHI 142
+S + ++ LL + YS +G + MVFE M G +L ++ R+D ++
Sbjct: 76 ---EASICHMLKHPHIVELL---ETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYS 128
Query: 143 QNVRT-IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ V + ++Q+LE L Y H IIH D+KPEN+L+ A+K + +KL
Sbjct: 129 EAVASHYMRQILEALRYCHDN-NIIHRDVKPENVLL-------------ASKENSAPVKL 174
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
DF +++++ + G + T + + EV+ Y
Sbjct: 175 --------GDFG----------VAIQLGESGLVA------GGRVGTPHFMAPEVVKREPY 210
Query: 262 GPAADIWSTACMAFELATG--------DYLFDPKAGKEYSRDDDHLAHIVE 304
G D+W + F L +G + LF+ +Y + +HI E
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISE 261
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 130/372 (34%), Gaps = 110/372 (29%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTAR--DEIVLLKAVG 82
F RY+++ LG G F V D + A+K++ K+ DT+ E+ LLK +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ + K+ +L D + +I G +I R K
Sbjct: 80 HPNIM-----------KLFEILEDSSSF-----YIVGELYTGGELFDEIIKR---KRFSE 120
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ IIKQV G+ Y+H I+H D+KPENIL+
Sbjct: 121 HDAARIIKQVFSGITYMHKH-NIVHRDLKPENILL------------------------- 154
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLG-NACWIDD-HFADEIQTRQYRSVEVLIGAG 260
++ D +KI D G + C+ + D I T Y + EVL G
Sbjct: 155 ---------------ESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT- 198
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y D+WS + + L +G F Y +++ + VE GK
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPF-------YGKNEYDILKRVE-----------TGKYA 240
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
+L W + + D D + ML + LR +A C
Sbjct: 241 F-------------DLPQW-------------RTISDDAKDLIRKMLTFHPSLRITATQC 274
Query: 381 LRHPWLNPRRSH 392
L HPW+ S
Sbjct: 275 LEHPWIQKYSSE 286
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 102/269 (37%), Gaps = 72/269 (26%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 56
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 111
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
T I ++ L+Y H++ R+IH DIKPEN+
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENL---------------------------- 142
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQYRSVEVLIGAGYG 262
LL A E +KIAD G + D++ T Y E++ G +
Sbjct: 143 ----------LLGSAGE-----LKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHD 187
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + +E G F+ +E
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 47/256 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ I LG G F V + + D + A+K ++ + T E++LL ++ + V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT-- 147
A + V + + ++ I M + G + Y IH +N+
Sbjct: 68 YAAWLERRNFVKPMT---AVKKKSTLFIQMEYCENG---------TLYDLIHSENLNQQR 115
Query: 148 -----IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ +Q+LE L+Y+H+Q IIH D+KP NI + D +++ KIG
Sbjct: 116 DEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFI------------DESRNVKIG---- 158
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-Y 261
DF L + DI +K+ D N D+ I T Y + EVL G G Y
Sbjct: 159 --------DFGLAKNVHRSLDI-LKL-DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 262 GPAADIWSTACMAFEL 277
D++S + FE+
Sbjct: 209 NEKIDMYSLGIIFFEM 224
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 109/268 (40%), Gaps = 69/268 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
Y +++ +G G+F+ V L+ + VA++I+ Q+ + + + E+ ++K + +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V + +EK + L+ + Y+ G EV Y L+A K + R
Sbjct: 76 V--KLFEVIETEKTLYLVME---YASGG-------EVFDY----LVAHGRMKE---KEAR 116
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+Q++ + Y H Q I+H D+K EN+L+ DA
Sbjct: 117 AKFRQIVSAVQYCH-QKFIVHRDLKAENLLL------------DA--------------- 148
Query: 207 STMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GP 263
D+++KIAD G N + + + Y + E+ G Y GP
Sbjct: 149 ----------------DMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + + L +G FD + KE
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 69/268 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
Y +++ +G G+F+ V L+ + VA+KI+ Q+ + + + E+ ++K + +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V + +EK + L+ + Y+ G EV Y L+A K + R
Sbjct: 76 V--KLFEVIETEKTLYLVME---YASGG-------EVFDY----LVAHGRMKE---KEAR 116
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+Q++ + Y H Q I+H D+K EN+L+ DA
Sbjct: 117 AKFRQIVSAVQYCH-QKFIVHRDLKAENLLL------------DA--------------- 148
Query: 207 STMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GP 263
D+++KIAD G N + + Y + E+ G Y GP
Sbjct: 149 ----------------DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + + L +G FD + KE
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 108/268 (40%), Gaps = 79/268 (29%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKA 80
+F+ RY R LG G F V L D A+K++ QV T ++ E+ LLK
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV-MGYNLL-RLIARSDYK 138
+ + + +L ++ + G + +V EV G L +I+R +
Sbjct: 83 LDHPN--------------IXKL---YEFFEDKG-YFYLVGEVYTGGELFDEIISRKRFS 124
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + II+QVL G+ Y H + +I+H D+KPEN+L+
Sbjct: 125 EV---DAARIIRQVLSGITYXH-KNKIVHRDLKPENLLL--------------------- 159
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------DEIQTRQYRS 252
++ D +++I D G + HF D+I T Y +
Sbjct: 160 -------------------ESKSKDANIRIIDFG----LSTHFEASKKXKDKIGTAYYIA 196
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATG 280
EVL G Y D+WST + + L +G
Sbjct: 197 PEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 69/268 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
Y +++ +G G+F+ V L+ + VA+KI+ Q+ + + + E+ ++K + +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V + +EK + L+ + Y+ G EV Y L+A K + R
Sbjct: 76 V--KLFEVIETEKTLYLVME---YASGG-------EVFDY----LVAHGRMKE---KEAR 116
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+Q++ + Y H Q I+H D+K EN+L+ DA
Sbjct: 117 AKFRQIVSAVQYCH-QKFIVHRDLKAENLLL------------DA--------------- 148
Query: 207 STMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GP 263
D+++KIAD G N + + Y + E+ G Y GP
Sbjct: 149 ----------------DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + + L +G FD + KE
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 79
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E Y L+ +++ D Q
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 134
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 135 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 167
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 20/150 (13%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK++ Q+ + A E L + V +S++
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQL--EKAGVEHQLRREVEIQSHLRH 71
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRT 147
++RL F +R ++ + + +G Y L+ ++R D Q T
Sbjct: 72 P--------NILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSRFDE-----QRTAT 116
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 117 YITELANALSYCHSK-RVIHRDIKPENLLL 145
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 20/150 (13%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK++ Q+ + A E L + V +S++
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQL--EKAGVEHQLRREVEIQSHLRH 71
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRT 147
++RL F +R ++ + + +G Y L+ ++R D Q T
Sbjct: 72 P--------NILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSRFDE-----QRTAT 116
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 117 YITELANALSYCHSK-RVIHRDIKPENLLL 145
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 101/269 (37%), Gaps = 72/269 (26%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 54
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 109
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
T I ++ L+Y H++ R+IH DIKPEN+
Sbjct: 110 RTATYITELANALSYCHSK-RVIHRDIKPENL---------------------------- 140
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQYRSVEVLIGAGYG 262
LL A E +KIAD G + D + T Y E++ G +
Sbjct: 141 ----------LLGSAGE-----LKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHD 185
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + +E G F+ +E
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 58
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E Y L+ +++ D Q
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE-----Q 113
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 114 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 146
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 58
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E Y L+ +++ D Q
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE-----Q 113
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 114 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 146
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 95/267 (35%), Gaps = 64/267 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY R LG G F+ + D+ K A K+V + ++++ A+ H
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI------H 80
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRT 147
S N F + + + +V E+ +LL L R K + R
Sbjct: 81 KSLDNPHVV--------GFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARY 130
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++Q ++G+ YLH R+IH D+K N+ + D D
Sbjct: 131 FMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMD------------------------- 164
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264
VKI D G A I+ + D T Y + EVL G+
Sbjct: 165 ------------------VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 206
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKE 291
DIWS C+ + L G F+ KE
Sbjct: 207 VDIWSLGCILYTLLVGKPPFETSCLKE 233
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 70
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 125
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 126 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 158
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 20/150 (13%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK++ Q+ + A E L + V +S++
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRH 70
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRT 147
++RL F +R ++ + + +G Y L+ +++ D Q T
Sbjct: 71 P--------NILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDE-----QRTAT 115
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 116 YITELANALSYCHSK-RVIHRDIKPENLLL 144
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 11 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 62
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 109
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 110 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 143
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 144 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 218
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 53
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E Y L+ +++ D Q
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 141
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 53
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 141
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 54
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 109
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 110 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 142
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 53
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E Y L+ +++ D Q
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 141
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 58
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 113
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 114 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 146
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 58
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 113
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 114 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 146
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 58
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 113
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 114 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 146
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 55
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 110
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 111 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 143
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 53
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 141
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 57
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 112
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 113 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 145
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 56
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 111
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 144
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 111/276 (40%), Gaps = 69/276 (25%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLL 78
+ DL Y +++ +G G+F+ V L+ + VA+KI+ Q+ + + + E+ ++
Sbjct: 1 MADLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM 60
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
K + + V + +EK + L+ + Y+ G EV Y L+A K
Sbjct: 61 KVLNHPNIV--KLFEVIETEKTLYLVME---YASGG-------EVFDY----LVAHGWMK 104
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ R +Q++ + Y H Q I+H D+K EN+L+ DA
Sbjct: 105 E---KEARAKFRQIVSAVQYCH-QKFIVHRDLKAENLLL------------DA------- 141
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVL 256
D+++KIAD G N + + Y + E+
Sbjct: 142 ------------------------DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 177
Query: 257 IGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKE 291
G Y GP D+WS + + L +G FD + KE
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 213
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 107/268 (39%), Gaps = 69/268 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
Y +++ +G G+F+ V L+ + VA+KI+ Q+ + + + E+ ++K + +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V + +EK + L+ + Y+ G EV Y L+A K + R
Sbjct: 76 V--KLFEVIETEKTLYLVME---YASGG-------EVFDY----LVAHGRMKE---KEAR 116
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+Q++ + Y H Q I+H D+K EN+L+ DA
Sbjct: 117 AKFRQIVSAVQYCH-QKFIVHRDLKAENLLL------------DA--------------- 148
Query: 207 STMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GP 263
D+++KIAD G N + Y + E+ G Y GP
Sbjct: 149 ----------------DMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + + L +G FD + KE
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 53
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 141
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 108/268 (40%), Gaps = 69/268 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
Y +++ +G G+F+ V L+ + VA++I+ Q+ + + + E+ ++K + +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V + +EK + L+ + Y+ G EV Y L+A K + R
Sbjct: 76 V--KLFEVIETEKTLYLVME---YASGG-------EVFDY----LVAHGRMKE---KEAR 116
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+Q++ + Y H Q I+H D+K EN+L+ DA
Sbjct: 117 AKFRQIVSAVQYCH-QKFIVHRDLKAENLLL------------DA--------------- 148
Query: 207 STMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GP 263
D+++KIAD G N + + Y + E+ G Y GP
Sbjct: 149 ----------------DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + + L +G FD + KE
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 53
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E Y L+ +++ D Q
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 141
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 55
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 110
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 111 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 143
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 96/267 (35%), Gaps = 64/267 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY R LG G F+ + D+ K A K+V + ++++ A+ H
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI------H 96
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRT 147
S N + F + + + +V E+ +LL L R K + R
Sbjct: 97 KSLDNPH--------VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARY 146
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++Q ++G+ YLH R+IH D+K N+ + D D
Sbjct: 147 FMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMD------------------------- 180
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264
VKI D G A I+ + D T Y + EVL G+
Sbjct: 181 ------------------VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 222
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKE 291
DIWS C+ + L G F+ KE
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 10 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 61
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 108
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 109 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 142
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 143 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 217
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 9 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 60
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 107
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 108 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 141
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 142 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 56
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 111
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 144
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 52
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 107
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 108 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 140
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 105/284 (36%), Gaps = 89/284 (31%)
Query: 112 RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+
Sbjct: 84 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDL 140
Query: 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
KPENI++ + R+ K +KI D
Sbjct: 141 KPENIML---------LDRNVPKPR------------------------------IKIID 161
Query: 231 LGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---- 217
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+G +E L+ N ++ Y+ E
Sbjct: 218 -----------------LGDTKQETLA-------------NVSAVN-------YEFEDEY 240
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ + A A DF LL + K R + D L+HPW+ P+ +
Sbjct: 241 FSNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 53
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 109 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 141
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 56
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 111
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 144
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 33 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 84
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG C++ +R I D
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG---CLL------KYIRKIGSFDE 131
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 132 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 165
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 166 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 203 PELLTEKSASKSSDLWALGCIIYQLVAGLPPF--RAGNEY 240
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 100/261 (38%), Gaps = 68/261 (26%)
Query: 31 HVIRK-LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
++IR+ LG G F V L+ + + VALK + + + +KS++H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFIS----------------RQLLKKSDMHM 54
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ K++R + K+Y T I MV E G L I K + R
Sbjct: 55 RVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRR 112
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q++ + Y H +I+H D+KPEN+L LD
Sbjct: 113 FFQQIICAIEYCHRH-KIVHRDLKPENLL----------------------------LDD 143
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY-GPA 264
+++VKIAD G + + D + Y + EV+ G Y GP
Sbjct: 144 ---------------NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPE 188
Query: 265 ADIWSTACMAFELATGDYLFD 285
D+WS + + + G FD
Sbjct: 189 VDVWSCGIVLYVMLVGRLPFD 209
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 105/284 (36%), Gaps = 89/284 (31%)
Query: 112 RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+
Sbjct: 84 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDL 140
Query: 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
KPENI++ + R+ K +KI D
Sbjct: 141 KPENIML---------LDRNVPKPR------------------------------IKIID 161
Query: 231 LGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---- 217
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+G +E L+ N ++ Y+ E
Sbjct: 218 -----------------LGDTKQETLA-------------NVSAVN-------YEFEDEY 240
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ + A A DF LL + K R + D L+HPW+ P+ +
Sbjct: 241 FSNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALK----------------VLFKAQLEKAGVEH 56
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 111
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 112 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 144
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 138/387 (35%), Gaps = 121/387 (31%)
Query: 10 MEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD 69
++ PG + + G L Y ++KLG G + V L D A+KI+
Sbjct: 20 LQATPGMFITSKKGHLSEM-YQRVKKLGSGAYGEVLLCRDKVTHVERAIKII-------- 70
Query: 70 TARDEIVLLKAVGRKSNVHSSAYNTQASE-KVIRLL---NDFKIYS----RNGTHICMVF 121
RK++V +S+ + E V++LL N K+Y + ++ M
Sbjct: 71 -------------RKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117
Query: 122 EVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181
G +I R + + + IIKQVL G+ YLH I+H D+KPEN+L+
Sbjct: 118 YKGGELFDEIIHRMKFNEV---DAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLL---- 169
Query: 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH- 240
++ D +KI D G + ++
Sbjct: 170 ------------------------------------ESKEKDALIKIVDFGLSAVFENQK 193
Query: 241 -FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHL 299
+ + T Y + EVL Y D+WS + F L G + P G + D +
Sbjct: 194 KMKERLGTAYYIAPEVL-RKKYDEKCDVWSIGVILFILLAG---YPPFGG----QTDQEI 245
Query: 300 AHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDF 359
VE +GK T + +P+ W K +
Sbjct: 246 LRKVE-----------KGKYT--FDSPE-----------W-------------KNVSEGA 268
Query: 360 ADFLLPMLHVNQKLRASAADCLRHPWL 386
D + ML + + R SA L HPW+
Sbjct: 269 KDLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 8 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 59
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 106
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 107 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 140
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 141 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 215
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 136/369 (36%), Gaps = 114/369 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIV-------LLK 79
NF ++LG G F+ V A K +K + D R EI+ L K
Sbjct: 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD-CRAEILHEIAVLELAK 86
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ R N+H NT ++I +L Y+ G +F + L +++ +D
Sbjct: 87 SCPRVINLHEVYENTS---EIILILE----YAAGGE----IFSLCLPELAEMVSEND--- 132
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
V +IKQ+LEG+ YLH Q I+H D+KP+NIL+ Y
Sbjct: 133 -----VIRLIKQILEGVYYLH-QNNIVHLDLKPQNILLSSIY------------------ 168
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
+ D ++D + +S KI G+AC + + T +Y + E+L
Sbjct: 169 --------PLGDIKIVD-----FGMSRKI---GHACELREIMG----TPEYLAPEILNYD 208
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
A D+W+ +A+ L L H VG
Sbjct: 209 PITTATDMWNIGIIAYML---------------------LTHTSPFVGE----------- 236
Query: 320 TLRYFTPQGNFRRIDNLKPW-GLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASA 377
DN + + + QV + + + S A DF+ +L N + R +A
Sbjct: 237 --------------DNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTA 282
Query: 378 ADCLRHPWL 386
CL H WL
Sbjct: 283 EICLSHSWL 291
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 106/283 (37%), Gaps = 89/283 (31%)
Query: 113 NGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+K
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
PENI++ + R+ K +KI D
Sbjct: 142 PENIML---------LDRNVPKPR------------------------------IKIIDF 162
Query: 232 GNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----- 217
Query: 290 KEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKY 349
+G +E L+ N ++ Y+ E +
Sbjct: 218 ----------------LGDTKQETLA-------------NVSAVN-------YEFEDEYF 241
Query: 350 HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ A A DF+ +L + K R + D L+HPW+ P+ +
Sbjct: 242 SNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 105/284 (36%), Gaps = 89/284 (31%)
Query: 112 RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+
Sbjct: 84 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDL 140
Query: 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
KPENI++ + R+ K +KI D
Sbjct: 141 KPENIML---------LDRNVPKPR------------------------------IKIID 161
Query: 231 LGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---- 217
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+G +E L+ N ++ Y+ E
Sbjct: 218 -----------------LGDTKQETLA-------------NVSAVN-------YEFEDEY 240
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ + A A DF LL + K R + D L+HPW+ P+ +
Sbjct: 241 FSNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 105/284 (36%), Gaps = 89/284 (31%)
Query: 112 RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+
Sbjct: 84 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDL 140
Query: 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
KPENI++ + R+ K +KI D
Sbjct: 141 KPENIML---------LDRNVPKPR------------------------------IKIID 161
Query: 231 LGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---- 217
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+G +E L+ N ++ Y+ E
Sbjct: 218 -----------------LGDTKQETLA-------------NVSAVN-------YEFEDEY 240
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ + A A DF LL + K R + D L+HPW+ P+ +
Sbjct: 241 FSNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 105/284 (36%), Gaps = 89/284 (31%)
Query: 112 RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+
Sbjct: 83 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDL 139
Query: 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
KPENI++ + R+ K +KI D
Sbjct: 140 KPENIML---------LDRNVPKPR------------------------------IKIID 160
Query: 231 LGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 161 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---- 216
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+G +E L+ N ++ Y+ E
Sbjct: 217 -----------------LGDTKQETLA-------------NVSAVN-------YEFEDEY 239
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ + A A DF LL + K R + D L+HPW+ P+ +
Sbjct: 240 FSNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKPKDTQ 280
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 105/284 (36%), Gaps = 89/284 (31%)
Query: 112 RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+
Sbjct: 83 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDL 139
Query: 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
KPENI++ + R+ K +KI D
Sbjct: 140 KPENIML---------LDRNVPKPR------------------------------IKIID 160
Query: 231 LGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 161 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---- 216
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+G +E L+ N ++ Y+ E
Sbjct: 217 -----------------LGDTKQETLA-------------NVSAVN-------YEFEDEY 239
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ + A A DF LL + K R + D L+HPW+ P+ +
Sbjct: 240 FSNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKPKDTQ 280
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 131/373 (35%), Gaps = 120/373 (32%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEI-VLLKAVGRKSNVH 88
+ V +LG G S V+ + ALK++K V R EI VLL+
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKK-TVDKKIVRTEIGVLLRL-------- 105
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRT 147
+ +I+L F+ T I +V E V G L I Y ++
Sbjct: 106 -------SHPNIIKLKEIFE----TPTEISLVLELVTGGELFDRIVEKGY--YSERDAAD 152
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+KQ+LE + YLH + I+H D+KPEN+L
Sbjct: 153 AVKQILEAVAYLH-ENGIVHRDLKPENLLY------------------------------ 181
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGPAA 265
A D +KIAD G + ++ T Y + E+L G YGP
Sbjct: 182 ----------ATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
D+WS + + L G F+P Y D
Sbjct: 232 DMWSVGIITYILLCG---FEPF----YDERGD---------------------------- 256
Query: 326 PQGNFRRIDN-----LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
Q FRRI N + PW W + + + D + ++ ++ K R +
Sbjct: 257 -QFMFRRILNCEYYFISPW-----------WDEV-SLNAKDLVRKLIVLDPKKRLTTFQA 303
Query: 381 LRHPWLNPRRSHY 393
L+HPW+ + +++
Sbjct: 304 LQHPWVTGKAANF 316
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 96/248 (38%), Gaps = 64/248 (25%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA-RDEIVLLKAVGRKSNVHSSAYNT 94
LG G FS V+L ALK +K + D++ +EI +LK + ++
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN--------- 67
Query: 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLL--RLIARSDYKGIHIQNVRTIIKQV 152
I L D IY + TH +V +++ L R++ R Y ++ +I+QV
Sbjct: 68 ------IVTLED--IY-ESTTHYYLVMQLVSGGELFDRILERGVYTE---KDASLVIQQV 115
Query: 153 LEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDF 212
L + YLH + I+H D+KPEN+L + + M D G+ M + MS
Sbjct: 116 LSAVKYLH-ENGIVHRDLKPENLLYLTPEENSKIMITD------FGLS-KMEQNGIMS-- 165
Query: 213 SLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTAC 272
AC T Y + EVL Y A D WS
Sbjct: 166 --------------------TAC----------GTPGYVAPEVLAQKPYSKAVDCWSIGV 195
Query: 273 MAFELATG 280
+ + L G
Sbjct: 196 ITYILLCG 203
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 105/283 (37%), Gaps = 89/283 (31%)
Query: 113 NGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+K
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
PENI++ + R+ K +KI D
Sbjct: 142 PENIML---------LDRNVPKPR------------------------------IKIIDF 162
Query: 232 GNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----- 217
Query: 290 KEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKY 349
+G +E L+ N ++ Y+ E +
Sbjct: 218 ----------------LGDTKQETLA-------------NVSAVN-------YEFEDEYF 241
Query: 350 HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ A A DF LL + K R + D L+HPW+ P+ +
Sbjct: 242 SNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 34 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 85
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 132
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 133 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 166
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 167 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 203
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 241
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 104/281 (37%), Gaps = 89/281 (31%)
Query: 112 RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+
Sbjct: 84 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDL 140
Query: 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
KPENI++ + R+ K +KI D
Sbjct: 141 KPENIML---------LDRNVPKPR------------------------------IKIID 161
Query: 231 LGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---- 217
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+G +E L+ N ++ Y+ E
Sbjct: 218 -----------------LGDTKQETLA-------------NVSAVN-------YEFEDEY 240
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389
+ + A A DF LL + K R + D L+HPW+ P+
Sbjct: 241 FSNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKPK 278
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 24/167 (14%)
Query: 13 RPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADT 70
R Y I DLF F+ RKLG G F V L + +K + D QV +
Sbjct: 11 RENLYFQGTIDDLFIFK----RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQ 66
Query: 71 ARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR 130
EI +LK++ + +I++ F+ Y + +I M G L R
Sbjct: 67 IEAEIEVLKSLDHPN--------------IIKIFEVFEDY--HNMYIVMETCEGGELLER 110
Query: 131 LI-ARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
++ A++ K + V ++KQ++ L Y H+Q ++H D+KPENIL
Sbjct: 111 IVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPENIL 156
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 33 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 84
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 131
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 132 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 165
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 166 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 240
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 33 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 84
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 131
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 132 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 165
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 166 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 240
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 31 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 82
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 129
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 130 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 163
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 164 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 34 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 85
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 132
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 133 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 166
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 167 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 203
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 241
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 31 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 82
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 129
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 130 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 163
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 164 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 238
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 89/284 (31%)
Query: 112 RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+
Sbjct: 84 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDL 140
Query: 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
KPENI++ + R+ K +KI D
Sbjct: 141 KPENIML---------LDRNVPKPR------------------------------IKIID 161
Query: 231 LGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---- 217
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+G +E L+ N ++ Y+ E
Sbjct: 218 -----------------LGDTKQETLA-------------NVSAVN-------YEFEDEY 240
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ + A A DF+ +L + K R + D L+HPW+ P+ +
Sbjct: 241 FSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 15 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 66
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 113
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 114 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 147
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 148 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 185 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 222
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 31 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 82
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 129
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 130 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 163
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 164 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 238
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 36 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 87
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 134
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 135 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 168
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 169 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 243
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + Q K +ALK VL KA K+ V
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALK----------------VLFKAQLEKAGVEH 50
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----Q 105
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ R+IH DIKPEN+L+
Sbjct: 106 RTATYITELANALSYCHSK-RVIHRDIKPENLLL 138
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 77/258 (29%)
Query: 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQVYADTARDEIVLLKAVGRKSNVHSS 90
+ ++G G F V+ D + + VA+KI+ + + + + EI +L S
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-------DS 80
Query: 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQNVR 146
+Y T+ ++ G+ + ++ E +G +LLR +++ +
Sbjct: 81 SYVTKYYGSYLK-----------GSKLWIIMEYLGGGSALDLLRAGPFDEFQ------IA 123
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
T++K++L+GL+YLH++ + IH DIK N+L+ D
Sbjct: 124 TMLKEILKGLDYLHSEKK-IHRDIKAANVLLSEQGD------------------------ 158
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEVLIGAGYGP 263
VK+AD G A + D + T + + EV+ + Y
Sbjct: 159 -------------------VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS 199
Query: 264 AADIWSTACMAFELATGD 281
ADIWS A ELA G+
Sbjct: 200 KADIWSLGITAIELAKGE 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 105/283 (37%), Gaps = 89/283 (31%)
Query: 113 NGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+K
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
PENI++ + R+ K +KI D
Sbjct: 142 PENIML---------LDRNVPKPR------------------------------IKIIDF 162
Query: 232 GNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----- 217
Query: 290 KEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKY 349
+G +E L+ N ++ Y+ E +
Sbjct: 218 ----------------LGDTKQETLA-------------NVSAVN-------YEFEDEYF 241
Query: 350 HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ A A DF LL + K R + D L+HPW+ P+ +
Sbjct: 242 SNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 103/271 (38%), Gaps = 67/271 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY +++ +G G+F L D Q VA+K ++ + + + EI+ +++ R N
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSL-RHPN-- 76
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRT 147
++R FK TH+ +V E G L I + R
Sbjct: 77 -----------IVR----FKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARF 119
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q++ G++Y H ++ H D+K EN L LD
Sbjct: 120 FFQQLISGVSYAHA-MQVAHRDLKLENTL----------------------------LDG 150
Query: 208 TMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GPA 264
+ PA +KIAD G A + + T Y + EVL+ Y G
Sbjct: 151 S--------PAPR-----LKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKV 197
Query: 265 ADIWSTACMAFELATGDYLF-DPKAGKEYSR 294
AD+WS + + G Y F DP+ K + +
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 228
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 68/263 (25%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD--TARDEIVLLK 79
I D+++FR LG G FS V L+ D + + VA+K + + + + +EI +L
Sbjct: 16 IRDIYDFR----DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + I L+D IY +G H+ ++ +++ L R KG
Sbjct: 72 KIKHPN---------------IVALDD--IY-ESGGHLYLIMQLVSGG--ELFDRIVEKG 111
Query: 140 IHIQ-NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL-MCVDYDKVRRMARDATKHHKI 197
+ + + +I QVL+ + YLH I+H D+KPEN+L +D D KI
Sbjct: 112 FYTERDASRLIFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDS------------KI 158
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257
+SDF L K+ D G+ + T Y + EVL
Sbjct: 159 ----------MISDFGL-----------SKMEDPGSV------LSTACGTPGYVAPEVLA 191
Query: 258 GAGYGPAADIWSTACMAFELATG 280
Y A D WS +A+ L G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 33 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 84
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 131
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 132 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 165
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 166 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 240
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 105/273 (38%), Gaps = 63/273 (23%)
Query: 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA 80
++G+L + + I +LG G+ V+ +A K++ + R++I+
Sbjct: 61 KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQ 118
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKG 139
V + N S ++ F YS ICM E M G +L +++ ++
Sbjct: 119 VLHECN----------SPYIVGFYGAF--YSDGEISICM--EHMDGGSLDQVLKKAGR-- 162
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I Q + + V++GL YL + +I+H D+KP NIL+ +
Sbjct: 163 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE----------------- 205
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEVLIG 258
+K+ D G + + D A+ + TR Y S E L G
Sbjct: 206 --------------------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG 239
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291
Y +DIWS E+A G Y P KE
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 30 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 81
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 128
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 129 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 162
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 163 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 68/263 (25%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD--TARDEIVLLK 79
I D+++FR LG G FS V L+ D + + VA+K + + + + +EI +L
Sbjct: 16 IRDIYDFR----DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + I L+D IY +G H+ ++ +++ L R KG
Sbjct: 72 KIKHPN---------------IVALDD--IY-ESGGHLYLIMQLVSGG--ELFDRIVEKG 111
Query: 140 IHIQ-NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL-MCVDYDKVRRMARDATKHHKI 197
+ + + +I QVL+ + YLH I+H D+KPEN+L +D D KI
Sbjct: 112 FYTERDASRLIFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDS------------KI 158
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257
+SDF L K+ D G+ + T Y + EVL
Sbjct: 159 ----------MISDFGL-----------SKMEDPGSV------LSTACGTPGYVAPEVLA 191
Query: 258 GAGYGPAADIWSTACMAFELATG 280
Y A D WS +A+ L G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 30 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 81
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 128
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 129 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 162
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 163 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 237
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 109/263 (41%), Gaps = 68/263 (25%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQVYADTARDEIVLLK 79
I D+++FR LG G FS V L+ D + + VA+K + K+ + + +EI +L
Sbjct: 16 IRDIYDFR----DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLH 71
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + I L+D IY +G H+ ++ +++ L R KG
Sbjct: 72 KIKHPN---------------IVALDD--IY-ESGGHLYLIMQLVSGG--ELFDRIVEKG 111
Query: 140 IHIQ-NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL-MCVDYDKVRRMARDATKHHKI 197
+ + + +I QVL+ + YLH I+H D+KPEN+L +D D KI
Sbjct: 112 FYTERDASRLIFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDS------------KI 158
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257
+SDF L K+ D G+ + T Y + EVL
Sbjct: 159 ----------MISDFGL-----------SKMEDPGSV------LSTACGTPGYVAPEVLA 191
Query: 258 GAGYGPAADIWSTACMAFELATG 280
Y A D WS +A+ L G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 68/263 (25%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD--TARDEIVLLK 79
I D+++FR LG G FS V L+ D + + VA+K + + + + +EI +L
Sbjct: 16 IRDIYDFR----DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + I L+D IY +G H+ ++ +++ L R KG
Sbjct: 72 KIKHPN---------------IVALDD--IY-ESGGHLYLIMQLVSGG--ELFDRIVEKG 111
Query: 140 IHIQ-NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL-MCVDYDKVRRMARDATKHHKI 197
+ + + +I QVL+ + YLH I+H D+KPEN+L +D D KI
Sbjct: 112 FYTERDASRLIFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDS------------KI 158
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257
+SDF L K+ D G+ + T Y + EVL
Sbjct: 159 ----------MISDFGL-----------SKMEDPGSV------LSTACGTPGYVAPEVLA 191
Query: 258 GAGYGPAADIWSTACMAFELATG 280
Y A D WS +A+ L G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 103/280 (36%), Gaps = 89/280 (31%)
Query: 112 RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+
Sbjct: 84 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDL 140
Query: 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
KPENI++ + R+ K +KI D
Sbjct: 141 KPENIML---------LDRNVPKPR------------------------------IKIID 161
Query: 231 LGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---- 217
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+G +E L+ N ++ Y+ E
Sbjct: 218 -----------------LGDTKQETLA-------------NVSAVN-------YEFEDEY 240
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388
+ + A A DF LL + K R + D L+HPW+ P
Sbjct: 241 FSNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKP 277
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 49/184 (26%)
Query: 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168
YS ICM E M G +L +++ ++ I Q + + V++GL YL + +I+H
Sbjct: 101 YSDGEISICM--EHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHR 156
Query: 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKI 228
D+KP NIL+ + +K+
Sbjct: 157 DVKPSNILVNSRGE-------------------------------------------IKL 173
Query: 229 ADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPK 287
D G + + D A+ + TR Y S E L G Y +DIWS E+A G Y P
Sbjct: 174 CDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233
Query: 288 AGKE 291
KE
Sbjct: 234 DAKE 237
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 38 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 89
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 90 VMSRLDHPFFVKLYFCFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 136
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 137 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 170
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 171 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 207
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 208 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 245
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 35/151 (23%)
Query: 134 RSDYKGIHIQNVRT-------IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
R+ Y IH +N+ + +Q+LE L+Y+H+Q IIH ++KP NI +
Sbjct: 100 RTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRNLKPXNIFI--------- 149
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ 246
D +++ KIG DF L + DI +K+ D N D+ I
Sbjct: 150 ---DESRNVKIG------------DFGLAKNVHRSLDI-LKL-DSQNLPGSSDNLTSAIG 192
Query: 247 TRQYRSVEVLIGAG-YGPAADIWSTACMAFE 276
T Y + EVL G G Y D +S + FE
Sbjct: 193 TAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 55/264 (20%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAV 81
IG + N RY ++ KLG G STV+L+ D VA+K + R++ LK
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI------FIPPREKEETLKRF 58
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIH 141
R+ VH+S+ Q S + I + D + + + ++ + G L I + +
Sbjct: 59 ERE--VHNSS---QLSHQNIVSMID--VDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLS 109
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ Q+L+G+ + H RI+H DIKP+NIL+ D+ K KI
Sbjct: 110 VDTAINFTNQILDGIKHAH-DMRIVHRDIKPQNILI------------DSNKTLKI---F 153
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
+ +S+ SL N V LG T QY S E G
Sbjct: 154 DFGIAKALSETSLTQ-TNHV---------LG--------------TVQYFSPEQAKGEAT 189
Query: 262 GPAADIWSTACMAFELATGDYLFD 285
DI+S + +E+ G+ F+
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 132/373 (35%), Gaps = 112/373 (30%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F Y + +LG G FS V + A KI+ + ++ +ARD +K
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL---SARDH--------QKL 68
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQN 144
+ ++RL + S G H + V G L ++AR Y +
Sbjct: 69 EREARICRLLKHPNIVRLHDSI---SEEGHHYLIFDLVTGGELFEDIVAREYYSE---AD 122
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
I+Q+LE + + H Q ++H D+KPEN+L+
Sbjct: 123 ASHCIQQILEAVLHCH-QMGVVHRDLKPENLLL--------------------------- 154
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIG 258
A+++ +VK+AD G A ++ FA T Y S EVL
Sbjct: 155 -------------ASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG---TPGYLSPEVLRK 198
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
YG D+W+ + + L LVG P
Sbjct: 199 DPYGKPVDLWACGVILYIL---------------------------LVGYPP-------- 223
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA 378
F + R +K G Y + ++ EA D + ML +N R +AA
Sbjct: 224 -----FWDEDQHRLYQQIKA-GAYDFPSPEWDTVTPEAKDLIN---KMLTINPSKRITAA 274
Query: 379 DCLRHPWLNPRRS 391
+ L+HPW++ R +
Sbjct: 275 EALKHPWISHRST 287
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 89/284 (31%)
Query: 112 RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+
Sbjct: 84 ENKTDVILIGELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDL 140
Query: 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
KPENI++ + R+ K +KI D
Sbjct: 141 KPENIML---------LDRNVPKPR------------------------------IKIID 161
Query: 231 LGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
G A ID + F + T ++ + E++ G AD+WS + + L +G F
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---- 217
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+G +E L+ N ++ Y+ E
Sbjct: 218 -----------------LGDTKQETLA-------------NVSAVN-------YEFEDEY 240
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ + A A DF+ +L + K R + D L+HPW+ P+ +
Sbjct: 241 FSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 24/153 (15%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR----DEIVLLKAVGRK 84
RY ++KLG G + V L D A+KI+K V + DE+ +LK +
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 81
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
+ +++L F+ + ++ M G +I R + + +
Sbjct: 82 N--------------IMKLYEFFE--DKRNYYLVMEVYRGGELFDEIILRQKFSEV---D 122
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
I+KQVL G YLH I+H D+KPEN+L+
Sbjct: 123 AAVIMKQVLSGTTYLHKH-NIVHRDLKPENLLL 154
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 145/372 (38%), Gaps = 81/372 (21%)
Query: 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLL 78
P + D++ + LG G ++ V + LQ+ A+KI++ A +R +
Sbjct: 7 PGKFEDMYKLTSEL---LGEGAYAKVQGAVSLQNGKEYAVKIIEKQ---AGHSRSRV--F 58
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDY 137
+ V + Y Q ++ ++ L+ F+ + T +VFE + G ++L I +
Sbjct: 59 REV-------ETLYQCQGNKNILELIEFFE----DDTRFYLVFEKLQGGSILAHIQKQ-- 105
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
K + + +++ V L++LHT+ I H D+KPENIL C +KV K
Sbjct: 106 KHFNEREASRVVRDVAAALDFLHTK-GIAHRDLKPENIL-CESPEKV-----SPVKICDF 158
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257
+ M L+++ + + +L C ++ A E+ VEV
Sbjct: 159 DLGSGMKLNNSCT--------------PITTPELTTPCGSAEYMAPEV-------VEVFT 197
Query: 258 GAG--YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
Y D+WS + + + +G F G + D + + + L
Sbjct: 198 DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ-------NKLF 250
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
+ + +Y P ++ I +S+ D + +L + K R
Sbjct: 251 ESIQEGKYEFPDKDWAHI----------------------SSEAKDLISKLLVRDAKQRL 288
Query: 376 SAADCLRHPWLN 387
SAA L+HPW+
Sbjct: 289 SAAQVLQHPWVQ 300
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 86/224 (38%), Gaps = 59/224 (26%)
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
V++GL YL + +I+H D+KP NIL+ +
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVNSRGE----------------------------- 146
Query: 212 FSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWST 270
+K+ D G + + D A+E + TR Y S E L G Y +DIWS
Sbjct: 147 --------------IKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSM 192
Query: 271 ACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGP-IPKEVLS-QGKKTLRYFTPQG 328
E+A G Y P A E L +IV P +P V S + + + +
Sbjct: 193 GLSLVEMAVGRYPRPPMAIFEL------LDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKN 246
Query: 329 NFRRIDNLKPWGLYQVLTEKY-HWSKAEASDFADFLLPMLHVNQ 371
R D L Q++ + S AE DFA +L + +NQ
Sbjct: 247 PAERAD------LKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQ 284
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 102/271 (37%), Gaps = 67/271 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY +++ +G G+F L D Q VA+K ++ + A + EI+ +++ R N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSL-RHPN-- 76
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRT 147
++R FK TH+ +V E G L I + R
Sbjct: 77 -----------IVR----FKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARF 119
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q++ G++Y H ++ H D+K EN L LD
Sbjct: 120 FFQQLISGVSYCHAM-QVCHRDLKLENTL----------------------------LDG 150
Query: 208 TMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GPA 264
+ PA +KI D G + + + T Y + EVL+ Y G
Sbjct: 151 S--------PAPR-----LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV 197
Query: 265 ADIWSTACMAFELATGDYLF-DPKAGKEYSR 294
AD+WS + + G Y F DP+ K + +
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 24/153 (15%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR----DEIVLLKAVGRK 84
RY ++KLG G + V L D A+KI+K V + DE+ +LK +
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 64
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
+ +++L F+ + ++ M G +I R + + +
Sbjct: 65 N--------------IMKLYEFFE--DKRNYYLVMEVYRGGELFDEIILRQKFSEV---D 105
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
I+KQVL G YLH I+H D+KPEN+L+
Sbjct: 106 AAVIMKQVLSGTTYLHKH-NIVHRDLKPENLLL 137
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 49/184 (26%)
Query: 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168
YS ICM E M G +L +++ ++ I Q + + V++GL YL + +I+H
Sbjct: 74 YSDGEISICM--EHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKI 228
D+KP NIL+ + +K+
Sbjct: 130 DVKPSNILVNSRGE-------------------------------------------IKL 146
Query: 229 ADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPK 287
D G + + D A+ + TR Y S E L G Y +DIWS E+A G Y P
Sbjct: 147 CDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
Query: 288 AGKE 291
KE
Sbjct: 207 DAKE 210
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 49/184 (26%)
Query: 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168
YS ICM E M G +L +++ ++ I Q + + V++GL YL + +I+H
Sbjct: 74 YSDGEISICM--EHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKI 228
D+KP NIL+ + +K+
Sbjct: 130 DVKPSNILVNSRGE-------------------------------------------IKL 146
Query: 229 ADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPK 287
D G + + D A+ + TR Y S E L G Y +DIWS E+A G Y P
Sbjct: 147 CDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
Query: 288 AGKE 291
KE
Sbjct: 207 DAKE 210
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 151/384 (39%), Gaps = 85/384 (22%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
+G G + V+L++D + VA+K K ++++ D ++ K + R+ + N
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIK--KVNRMFED-----LIDCKRILREITI----LNRL 82
Query: 96 ASEKVIRLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVL 153
S+ +IRL D I + +V E+ +L +L + + ++++TI+ +L
Sbjct: 83 KSDYIIRLY-DLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEEHIKTILYNLL 139
Query: 154 EGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFS 213
G N++H + IIH D+KP N L+ D + DF
Sbjct: 140 LGENFIH-ESGIIHRDLKPANCLLNQD------------------------CSVKVCDFG 174
Query: 214 LLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVE-VLIGAGYGPAA 265
L N D ++ + DL H + TR YR+ E +L+ Y +
Sbjct: 175 LARTINSEKDTNI-VNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSI 233
Query: 266 DIWSTACM-----------------AFELATGDYLF----DPKAGKEYSRDD-DHLAHIV 303
DIWST C+ F L G F D + K + + + D L I
Sbjct: 234 DIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIF 293
Query: 304 ELVG-PIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADF 362
++G P ++ + K + + R+ NLK +KY + + D +
Sbjct: 294 NIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLK---------QKY---PSISDDGINL 341
Query: 363 LLPMLHVNQKLRASAADCLRHPWL 386
L ML N R + L HP+L
Sbjct: 342 LESMLKFNPNKRITIDQALDHPYL 365
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 104/283 (36%), Gaps = 89/283 (31%)
Query: 113 NGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
N T + ++ E V G L +A + + + +KQ+L G+ YLH+ +I H D+K
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
PENI++ + R+ K +KI D
Sbjct: 142 PENIML---------LDRNVPKPR------------------------------IKIIDF 162
Query: 232 GNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289
G A ID + F + T + + E++ G AD+WS + + L +G F
Sbjct: 163 GLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----- 217
Query: 290 KEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKY 349
+G +E L+ N ++ Y+ E +
Sbjct: 218 ----------------LGDTKQETLA-------------NVSAVN-------YEFEDEYF 241
Query: 350 HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ A A DF LL + K R + D L+HPW+ P+ +
Sbjct: 242 SNTSALAKDFIRRLLVK---DPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 130/355 (36%), Gaps = 66/355 (18%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKS--DQVYADTARDEIVLLKAVGRKSNVHSSAYN 93
LG G + V + VA+K ++ ++A EI +LK ++ + + +N
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII--TIFN 76
Query: 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVL 153
Q + N + ++ E+M +L R+I+ HIQ I Q L
Sbjct: 77 IQRPDSF-----------ENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ---YFIYQTL 122
Query: 154 EGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFS 213
+ LH +IH D+KP N+L+ + D + DF
Sbjct: 123 RAVKVLHGS-NVIHRDLKPSNLLINSN------------------------CDLKVCDFG 157
Query: 214 LLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI-GAGYGPAADIWSTAC 272
L +E AD + + TR YR+ EV++ A Y A D+WS C
Sbjct: 158 LARIIDE------SAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 273 MAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332
+ EL +F G++Y L I ++G LR + R
Sbjct: 212 ILAELFLRRPIF---PGRDYRH---QLLLIFGIIG------TPHSDNDLRCIE---SPRA 256
Query: 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387
+ +K +Y + + + D L ML + R +A + L HP+L
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
V++GL YL + +I+H D+KP NIL+ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGE----------------------------- 143
Query: 212 FSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWST 270
+K+ D G + + D A+ + TR Y S E L G Y +DIWS
Sbjct: 144 --------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 271 ACMAFELATGDYLFDPKAGKE 291
E+A G Y P KE
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
V++GL YL + +I+H D+KP NIL+ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGE----------------------------- 143
Query: 212 FSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWST 270
+K+ D G + + D A+ + TR Y S E L G Y +DIWS
Sbjct: 144 --------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 271 ACMAFELATGDYLFDPKAGKE 291
E+A G Y P KE
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKE 210
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 86/280 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FST L+ +L A+KI++ + + + V R+ +
Sbjct: 31 DFKFGKI--LGEGSFSTTVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 82
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 129
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 130 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 163
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 164 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
E+L ++D+W+ C+ ++L G F +AG EY
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 238
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 136/371 (36%), Gaps = 87/371 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
R+ V R G G F TV L + VA+K V D + + + L + + V
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQ 83
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+Y E+ R ++ +V E + L R +Y + +
Sbjct: 84 LQSYFYTLGER-----------DRRDIYLNVVMEYVPDTLHRCC--RNYYRRQVAPPPIL 130
Query: 149 IK----QVLEGLNYLH-TQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
IK Q++ + LH + H DIKP N+L+
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV-------------------------- 164
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE--IQTRQYRSVEVLIGAG- 260
NE D ++K+ D G+A + + I +R YR+ E++ G
Sbjct: 165 ---------------NEA-DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQH 208
Query: 261 YGPAADIWSTACMAFELATGDYLF--DPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y A DIWS C+ E+ G+ +F D AG+ L IV ++G +EV
Sbjct: 209 YTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ--------LHEIVRVLGCPSREV----- 255
Query: 319 KTLRYFTPQGNFRRIDNLK--PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
LR P + N K PW V ++ S +A + D L +L + R
Sbjct: 256 --LRKLNPSHTDVDLYNSKGIPWS--NVFSDH---SLKDAKEAYDLLSALLQYLPEERMK 308
Query: 377 AADCLRHPWLN 387
+ L HP+ +
Sbjct: 309 PYEALCHPYFD 319
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
VL GL YL + +I+H D+KP NIL+ +
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVNSRGE----------------------------- 153
Query: 212 FSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWST 270
+K+ D G + + D A+ + TR Y + E L G Y +DIWS
Sbjct: 154 --------------IKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSM 199
Query: 271 ACMAFELATGDYLFDPKAGKE 291
ELA G Y P KE
Sbjct: 200 GLSLVELAVGRYPIPPPDAKE 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 97/269 (36%), Gaps = 68/269 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY R LG G F+ + D+ K A K+V + ++++ A+ H
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI------H 96
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRT 147
S N + F + + + +V E+ +LL L R K + R
Sbjct: 97 KSLDNPH--------VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARY 146
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++Q ++G+ YLH R+IH D+K N+ + D D
Sbjct: 147 FMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMD------------------------- 180
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-----TRQYRSVEVLIGAGYG 262
VKI D G A I+ F E + T Y + EVL G+
Sbjct: 181 ------------------VKIGDFGLATKIE--FDGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKE 291
DIWS C+ + L G F+ KE
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 105/268 (39%), Gaps = 69/268 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
Y +++ +G G+F+ V L+ + VA+KI+ Q+ + + + E+ + K + +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V + +EK + L+ + Y+ G EV Y L+A K + R
Sbjct: 76 V--KLFEVIETEKTLYLVXE---YASGG-------EVFDY----LVAHGRXKE---KEAR 116
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+Q++ + Y H Q I+H D+K EN+L+ DA
Sbjct: 117 AKFRQIVSAVQYCH-QKFIVHRDLKAENLLL------------DA--------------- 148
Query: 207 STMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GP 263
D ++KIAD G N + Y + E+ G Y GP
Sbjct: 149 ----------------DXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + + L +G FD + KE
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 132/368 (35%), Gaps = 92/368 (25%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKS--DQVYADTARDEIVLLKAVGRKSNVHSSAYN 93
LG G + V + VA+K ++ ++A EI +LK ++ + + +N
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII--TIFN 76
Query: 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVL 153
Q + N + ++ E+M +L R+I+ HIQ I Q L
Sbjct: 77 IQRPDSF-----------ENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ---YFIYQTL 122
Query: 154 EGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFS 213
+ LH +IH D+KP N+L+ + D
Sbjct: 123 RAVKVLHGS-NVIHRDLKPSNLLINSNCD------------------------------- 150
Query: 214 LLDPANEVYDISVKIADLGNACWIDDHFADE-------------IQTRQYRSVEVLI-GA 259
+K+ D G A ID+ AD + TR YR+ EV++ A
Sbjct: 151 ------------LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSA 198
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y A D+WS C+ EL +F G++Y L I ++G
Sbjct: 199 KYSRAMDVWSCGCILAELFLRRPIF---PGRDYRH---QLLLIFGIIG------TPHSDN 246
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
LR + R + +K +Y + + + D L ML + R +A +
Sbjct: 247 DLRCIE---SPRAREYIKSLPMYPAAPLEKMFPRVNPKGI-DLLQRMLVFDPAKRITAKE 302
Query: 380 CLRHPWLN 387
L HP+L
Sbjct: 303 ALEHPYLQ 310
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 97/269 (36%), Gaps = 68/269 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY R LG G F+ + D+ K A K+V + ++++ A+ H
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI------H 96
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRT 147
S N + F + + + +V E+ +LL L R K + R
Sbjct: 97 KSLDNPH--------VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARY 146
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++Q ++G+ YLH R+IH D+K N+ + D D
Sbjct: 147 FMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMD------------------------- 180
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-----TRQYRSVEVLIGAGYG 262
VKI D G A I+ F E + T Y + EVL G+
Sbjct: 181 ------------------VKIGDFGLATKIE--FDGERKKTLCGTPNYIAPEVLCKKGHS 220
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKE 291
DIWS C+ + L G F+ KE
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y +IR L G F+ + L +D F ALK K ++ + RD K+ K ++ S
Sbjct: 33 YRIIRTLNQGKFNKIILCE--KDNKFYALK--KYEKSLLEKKRD---FTKSNNDKISIKS 85
Query: 90 SAYNTQASEKVIR-LLNDFKIYSR----NGTHICMVFE------VMGYNLLRLIARSDYK 138
+ + ++I + N++ + N + +++E ++ ++ + +Y
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 139 G-IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
I IQ ++ IIK VL +Y+H + I H D+KP NILM
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 132/368 (35%), Gaps = 92/368 (25%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKS--DQVYADTARDEIVLLKAVGRKSNVHSSAYN 93
LG G + V + VA+K ++ ++A EI +LK ++ + + +N
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII--TIFN 76
Query: 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVL 153
Q + N + ++ E+M +L R+I+ HIQ I Q L
Sbjct: 77 IQRPDSF-----------ENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ---YFIYQTL 122
Query: 154 EGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFS 213
+ LH +IH D+KP N+L+ + D
Sbjct: 123 RAVKVLHGS-NVIHRDLKPSNLLINSNCD------------------------------- 150
Query: 214 LLDPANEVYDISVKIADLGNACWIDDHFADE-------------IQTRQYRSVEVLI-GA 259
+K+ D G A ID+ AD + TR YR+ EV++ A
Sbjct: 151 ------------LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSA 198
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y A D+WS C+ EL +F G++Y L I ++G
Sbjct: 199 KYSRAMDVWSCGCILAELFLRRPIF---PGRDYRH---QLLLIFGIIG------TPHSDN 246
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
LR + R + +K +Y + + + D L ML + R +A +
Sbjct: 247 DLRCIE---SPRAREYIKSLPMYPAAPLEKMFPRVNPKGI-DLLQRMLVFDPAKRITAKE 302
Query: 380 CLRHPWLN 387
L HP+L
Sbjct: 303 ALEHPYLQ 310
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 67/251 (26%)
Query: 35 KLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQVYADTARDEIVLLKAVGRKSNVHSSAY 92
++G G F V+ D K VA+KI+ + + + + EI +L S Y
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-------DSPY 78
Query: 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQ 151
T+ F Y ++ T + ++ E +G + L L+ + +I TI+++
Sbjct: 79 ITRY----------FGSYLKS-TKLWIIMEYLGGGSALDLLKPGPLEETYIA---TILRE 124
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
+L+GL+YLH++ R IH DIK N+L+ D ++D
Sbjct: 125 ILKGLDYLHSE-RKIHRDIKAANVLLSEQG------------------------DVKLAD 159
Query: 212 FSLLDPANEVYDISVKIAD-LGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWST 270
F + A ++ D +K +G W+ + EV+ + Y ADIWS
Sbjct: 160 FGV---AGQLTDTQIKRNXFVGTPFWM--------------APEVIKQSAYDFKADIWSL 202
Query: 271 ACMAFELATGD 281
A ELA G+
Sbjct: 203 GITAIELAKGE 213
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 35/132 (26%)
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ Q LEGL YLHT+ RI+H D+K +N+L+ D + +
Sbjct: 172 LGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSR-----------------------AA 207
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF + + ++ LG + D+ T + + EV++G DIW
Sbjct: 208 LCDFG--------HALCLQPDGLGKSLLTGDYIPG---TETHMAPEVVMGKPCDAKVDIW 256
Query: 269 STACMAFELATG 280
S+ CM + G
Sbjct: 257 SSCCMMLHMLNG 268
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 155/361 (42%), Gaps = 79/361 (21%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y ++RKLG G +S V+ + ++ + V +KI+K V + + EI +L+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKNKIKREIKILE---------- 86
Query: 90 SAYNTQASEKVIRLLNDFK-IYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
N + +I L + K SR +VFE + + + Y+ + ++R
Sbjct: 87 ---NLRGGPNIITLADIVKDPVSRTP---ALVFEHVNNTDFKQL----YQTLTDYDIRFY 136
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ ++L+ L+Y H+ I+H D+KP N+++ ++ K+R +D
Sbjct: 137 MYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR------------------LIDWG 177
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADI 267
+++F P E +V++A +R ++ E+L+ Y + D+
Sbjct: 178 LAEF--YHPGQEY---NVRVA-----------------SRYFKGPELLVDYQMYDYSLDM 215
Query: 268 WSTACMAFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326
WS CM LA+ + +P + D+ D L I +++G +++ K P
Sbjct: 216 WSLGCM---LASMIFRKEPFF---HGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELDP 267
Query: 327 QGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385
+ N + K W + V +E H EA DF D LL H + R +A + + HP+
Sbjct: 268 RFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QSRLTAREAMEHPY 323
Query: 386 L 386
Sbjct: 324 F 324
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 108/279 (38%), Gaps = 86/279 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 33 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 84
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 131
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 132 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 165
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 166 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291
E+L ++D+W+ C+ ++L G F +AG E
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAGLPPF--RAGNE 239
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 35/132 (26%)
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ Q LEGL YLHT+ RI+H D+K +N+L+ D + +
Sbjct: 170 LGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSR-----------------------AA 205
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF + + ++ LG + D+ T + + EV++G DIW
Sbjct: 206 LCDFG--------HALCLQPDGLGKSLLTGDYIPG---TETHMAPEVVMGKPCDAKVDIW 254
Query: 269 STACMAFELATG 280
S+ CM + G
Sbjct: 255 SSCCMMLHMLNG 266
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 106/268 (39%), Gaps = 69/268 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
Y + + +G G+F+ V L+ + VA+KI+ Q+ + + E+ ++K + +
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V + +EK + L+ + Y+ G EV Y L+A K + R
Sbjct: 77 V--KLFEVIETEKTLYLVME---YASGG-------EVFDY----LVAHGRMKE---KEAR 117
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+Q++ + Y H Q I+H D+K EN+L LD
Sbjct: 118 AKFRQIVSAVQYCH-QKYIVHRDLKAENLL----------------------------LD 148
Query: 207 STMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GP 263
D+++KIAD G N + + + Y + E+ G Y GP
Sbjct: 149 G---------------DMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGP 193
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKE 291
D+WS + + L +G FD + KE
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 35/132 (26%)
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ Q LEGL YLHT+ RI+H D+K +N+L+ D + +
Sbjct: 156 LGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSR-----------------------AA 191
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF + + ++ LG + D+ T + + EV++G DIW
Sbjct: 192 LCDFG--------HALCLQPDGLGKSLLTGDYIPG---TETHMAPEVVMGKPCDAKVDIW 240
Query: 269 STACMAFELATG 280
S+ CM + G
Sbjct: 241 SSCCMMLHMLNG 252
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 102/271 (37%), Gaps = 67/271 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY +++ +G G+F L D Q VA+K ++ + + + EI+ +++ R N
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL-RHPN-- 75
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRT 147
++R FK TH+ +V E G L I + R
Sbjct: 76 -----------IVR----FKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARF 118
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q++ G++Y H ++ H D+K EN L LD
Sbjct: 119 FFQQLISGVSYCHAM-QVCHRDLKLENTL----------------------------LDG 149
Query: 208 TMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GPA 264
+ PA +KI D G + + + T Y + EVL+ Y G
Sbjct: 150 S--------PAPR-----LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV 196
Query: 265 ADIWSTACMAFELATGDYLF-DPKAGKEYSR 294
AD+WS + + G Y F DP+ K + +
Sbjct: 197 ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 227
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 49/179 (27%)
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
G+ +RT++ + L YLH + RIIH D+KPENI
Sbjct: 118 GLKEGPIRTLLSDISSALRYLH-ENRIIHRDLKPENI----------------------- 153
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVL 256
+L P + + KI DLG A +D + + + T QY + E+L
Sbjct: 154 ---------------VLQPGPQ--RLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL 196
Query: 257 IGAGYGPAADIWSTACMAFELATGDYLFDPK------AGKEYSRDDDHLAHIVELVGPI 309
Y D WS +AFE TG F P GK + ++H+ +L G +
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV 255
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 69/179 (38%), Gaps = 49/179 (27%)
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
G+ +RT++ + L YLH RIIH D+KPENI
Sbjct: 117 GLKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENI----------------------- 152
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVL 256
+L P + + KI DLG A +D + + + T QY + E+L
Sbjct: 153 ---------------VLQPGPQ--RLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL 195
Query: 257 IGAGYGPAADIWSTACMAFELATGDYLFDPK------AGKEYSRDDDHLAHIVELVGPI 309
Y D WS +AFE TG F P GK + ++H+ +L G +
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV 254
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 108/279 (38%), Gaps = 86/279 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+F++ I LG G FSTV L+ +L A+KI++ + + + V R+ +
Sbjct: 33 DFKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENK------VPYVTRERD 84
Query: 87 VHSSA---------YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
V S + Q EK+ L+ Y++NG E++ Y +R I D
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLS----YAKNG-------ELLKY--IRKIGSFDE 131
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
R +++ L YLH + IIH D+KPENIL+
Sbjct: 132 -----TCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILL-------------------- 165
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRS 252
NE D+ ++I D G A + + T QY S
Sbjct: 166 ---------------------NE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291
E+L ++D+W+ C+ ++L G F +AG E
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNE 239
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 117/278 (42%), Gaps = 75/278 (26%)
Query: 16 GYCPVQIG--DLFNFR------YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQ 65
+ PVQ G + N + + + K+G G F V+ D + + VA+KI+ + +
Sbjct: 2 AHSPVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE 61
Query: 66 VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG 125
+ + EI +L S Y T+ + Y ++ T + ++ E +G
Sbjct: 62 DEIEDIQQEITVLSQC-------DSPYVTKY----------YGSYLKD-TKLWIIMEYLG 103
Query: 126 Y-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
+ L L+ I TI++++L+GL+YLH++ + IH DIK N+L+
Sbjct: 104 GGSALDLLEPGPLDETQIA---TILREILKGLDYLHSEKK-IHRDIKAANVLL------- 152
Query: 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD-LGNACWIDDHFAD 243
++H ++ ++DF + A ++ D +K +G W+
Sbjct: 153 -------SEHGEV----------KLADFGV---AGQLTDTQIKRNXFVGTPFWM------ 186
Query: 244 EIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGD 281
+ EV+ + Y ADIWS A ELA G+
Sbjct: 187 --------APEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 107/266 (40%), Gaps = 69/266 (25%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
V +GD +Y K+G G TV+ + D+ VA++ + Q + E+++ +
Sbjct: 13 VSVGDPKK-KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINE 67
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYK 138
+ + N + + ++ L+ + + G + +V E + G +L ++ +
Sbjct: 68 ILVMRENKNPN---------IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET--- 111
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + + ++ L+ L +LH+ ++IH DIK +NIL+ G
Sbjct: 112 CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILL--------------------G 150
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEV 255
M D SVK+ D G I ++ + T + + EV
Sbjct: 151 M-----------------------DGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEV 187
Query: 256 LIGAGYGPAADIWSTACMAFELATGD 281
+ YGP DIWS MA E+ G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 102/271 (37%), Gaps = 67/271 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY +++ +G G+F L D Q VA+K ++ + + + EI+ +++ R N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL-RHPN-- 76
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRT 147
++R FK TH+ +V E G L I + R
Sbjct: 77 -----------IVR----FKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARF 119
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q++ G++Y H ++ H D+K EN L LD
Sbjct: 120 FFQQLISGVSYCHAM-QVCHRDLKLENTL----------------------------LDG 150
Query: 208 TMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GPA 264
+ PA +KI G + + D + T Y + EVL+ Y G
Sbjct: 151 S--------PAPR-----LKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKV 197
Query: 265 ADIWSTACMAFELATGDYLF-DPKAGKEYSR 294
AD+WS + + G Y F DP+ K + +
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 228
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 130/363 (35%), Gaps = 100/363 (27%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +LG G FS V + A KI+ + ++ +ARD +K +
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDH--------QKLEREA 54
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQNVRTI 148
++RL + S G H + V G L ++AR Y +
Sbjct: 55 RICRLLKHPNIVRLHDSI---SEEGFHYLVFDLVTGGELFEDIVAREYYSE---ADASHC 108
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
I+Q+LE +N+ H I+H D+KPEN+L+ A+K +KL
Sbjct: 109 IQQILESVNHCHLN-GIVHRDLKPENLLL-------------ASKSKGAAVKL------- 147
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L A EV W FA T Y S EVL YG D+W
Sbjct: 148 -ADFGL---AIEVQG--------DQQAWFG--FAG---TPGYLSPEVLRKDPYGKPVDMW 190
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328
+ + + L LVG P F +
Sbjct: 191 ACGVILYIL---------------------------LVGYPP-------------FWDED 210
Query: 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388
R +K G Y + ++ EA D + ML +N R +A++ L+HPW+
Sbjct: 211 QHRLYQQIKA-GAYDFPSPEWDTVTPEAKDLIN---KMLTINPAKRITASEALKHPWICQ 266
Query: 389 RRS 391
R +
Sbjct: 267 RST 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 28/154 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + K +ALK VL KA K+ V
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALK----------------VLFKAQLEKAGVEH 53
Query: 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEV--MG--YNLLRLIARSDYKGIHIQ 143
+ +R N ++Y + T + ++ E +G Y L+ +++ D Q
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE-----Q 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
T I ++ L+Y H++ ++IH DIKPEN+L+
Sbjct: 109 RTATYITELANALSYCHSK-KVIHRDIKPENLLL 141
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 79 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 125
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 126 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 153
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 154 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 202
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 249
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 82
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 83 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 129
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 130 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 157
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 158 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 206
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 207 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 253
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 79
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 80 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 126
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 127 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 154
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 155 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 203
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 204 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 250
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 79 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 125
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 126 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 153
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 154 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 202
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 249
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 43/139 (30%)
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ TI++++L+GL+YLH++ + IH DIK N+L+ ++H ++
Sbjct: 105 QIATILREILKGLDYLHSEKK-IHRDIKAANVLL--------------SEHGEV------ 143
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIAD-LGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
++DF + A ++ D +K +G W+ + EV+ + Y
Sbjct: 144 ----KLADFGV---AGQLTDTQIKRNTFVGTPFWM--------------APEVIKQSAYD 182
Query: 263 PAADIWSTACMAFELATGD 281
ADIWS A ELA G+
Sbjct: 183 SKADIWSLGITAIELARGE 201
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 105/281 (37%), Gaps = 93/281 (33%)
Query: 113 NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
+G ++ +V E+M G LL I R + + ++ + + + YLH Q ++H D+K
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHAQG-VVHRDLK 143
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
P NIL + P S+ + DF + + L
Sbjct: 144 PSNILYVDESGN------------------PESI--RICDFGF------AKQLRAENGLL 177
Query: 232 GNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291
C+ + A E+ RQ GY A DIWS + + + TG + P A
Sbjct: 178 MTPCYTANFVAPEVLERQ----------GYDAACDIWSLGVLLYTMLTG---YTPFAN-- 222
Query: 292 YSRDDDHLAHIVELVGP--IPKEVLSQ---GKKTLRYFTPQGNFRRIDNLKPWGLYQVLT 346
GP P+E+L++ GK F+ G +
Sbjct: 223 ---------------GPDDTPEEILARIGSGK-----FSLSGGY---------------- 246
Query: 347 EKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADCLRHPWL 386
W+ SD A D + MLHV+ R +AA LRHPW+
Sbjct: 247 ----WN--SVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 43/139 (30%)
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ TI++++L+GL+YLH++ + IH DIK N+L+ ++H ++
Sbjct: 105 QIATILREILKGLDYLHSEKK-IHRDIKAANVLL--------------SEHGEV------ 143
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIAD-LGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
++DF + A ++ D +K +G W+ + EV+ + Y
Sbjct: 144 ----KLADFGV---AGQLTDTQIKRNXFVGTPFWM--------------APEVIKQSAYD 182
Query: 263 PAADIWSTACMAFELATGD 281
ADIWS A ELA G+
Sbjct: 183 SKADIWSLGITAIELARGE 201
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 90
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 91 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 137
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 138 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 165
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 166 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 214
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 215 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 261
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 97
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 98 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 144
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 145 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 172
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 173 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 221
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 222 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 268
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 43/139 (30%)
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ TI++++L+GL+YLH++ + IH DIK N+L+ ++H ++
Sbjct: 125 QIATILREILKGLDYLHSEKK-IHRDIKAANVLL--------------SEHGEV------ 163
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIAD-LGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
++DF + A ++ D +K +G W+ + EV+ + Y
Sbjct: 164 ----KLADFGV---AGQLTDTQIKRNTFVGTPFWM--------------APEVIKQSAYD 202
Query: 263 PAADIWSTACMAFELATGD 281
ADIWS A ELA G+
Sbjct: 203 SKADIWSLGITAIELARGE 221
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 101/255 (39%), Gaps = 56/255 (21%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
++ +Y + LG G F VW + D + V +K +K ++V D ++ L K
Sbjct: 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKL-----GKV 76
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ + + +I++L+ F+ ++ + M G +L I R + +
Sbjct: 77 TLEIAILSRVEHANIIKVLDIFE--NQGFFQLVMEKHGSGLDLFAFIDR--HPRLDEPLA 132
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
I +Q++ + YL + IIH DIK ENI++ D+
Sbjct: 133 SYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAEDF------------------------ 167
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGY-G 262
++K+ D G+A +++ F T +Y + EVL+G Y G
Sbjct: 168 -------------------TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRG 208
Query: 263 PAADIWSTACMAFEL 277
P ++WS + L
Sbjct: 209 PELEMWSLGVTLYTL 223
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 86
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 87 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 133
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 134 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 161
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 162 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 210
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 211 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 257
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 90
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 91 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 137
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 138 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 165
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 166 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 214
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 215 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 261
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 130/369 (35%), Gaps = 112/369 (30%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +LG G FS V + A KI+ + ++ +ARD L
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQKL------------ 50
Query: 90 SAYNTQASEKVIRLLNDFKIY------SRNGTHICMVFEVMGYNLLR-LIARSDYKGIHI 142
+ ++ RLL I S G H + V G L ++AR Y
Sbjct: 51 -----EREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE--- 102
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ I+Q+LE +N+ H I+H D+KPEN+L+ A+K +KL
Sbjct: 103 ADASHCIQQILESVNHCHLNG-IVHRDLKPENLLL-------------ASKSKGAAVKL- 147
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
+DF L A EV W FA T Y S EVL YG
Sbjct: 148 -------ADFGL---AIEVQG--------DQQAWFG--FAG---TPGYLSPEVLRKDPYG 184
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
D+W+ + + L LVG P
Sbjct: 185 KPVDMWACGVILYIL---------------------------LVGYPP------------ 205
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
F + R +K G Y + ++ EA D + ML +N R +A++ L+
Sbjct: 206 -FWDEDQHRLYQQIKA-GAYDFPSPEWDTVTPEAKDLIN---KMLTINPAKRITASEALK 260
Query: 383 HPWLNPRRS 391
HPW+ R +
Sbjct: 261 HPWICQRST 269
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 54/219 (24%)
Query: 113 NGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
N T + ++ E V G L +A + + +KQ+L+G++YLH++ RI H D+K
Sbjct: 86 NKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK-RIAHFDLK 142
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
PENI++ D ++ +P +K+ D
Sbjct: 143 PENIMLL--------------------------------DKNVPNP-------RIKLIDF 163
Query: 232 GNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289
G A I+ + F + T ++ + E++ G AD+WS + + L +G F +
Sbjct: 164 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 223
Query: 290 KE---------YSRDDDHLAHIVELVGPIPKEVLSQGKK 319
+E Y D+++ ++ EL + +L + K
Sbjct: 224 QETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPK 262
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 79 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 125
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 126 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 153
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 154 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 202
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 249
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 106/266 (39%), Gaps = 69/266 (25%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
V +GD +Y K+G G TV+ + D+ VA++ + Q + E+++ +
Sbjct: 13 VSVGDPKK-KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINE 67
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYK 138
+ + N + + ++ L+ + + G + +V E + G +L ++ +
Sbjct: 68 ILVMRENKNPN---------IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET--- 111
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + + ++ L+ L +LH+ ++IH DIK +NIL+ G
Sbjct: 112 CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILL--------------------G 150
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEV 255
M D SVK+ D G I + + T + + EV
Sbjct: 151 M-----------------------DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 256 LIGAGYGPAADIWSTACMAFELATGD 281
+ YGP DIWS MA E+ G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 106/266 (39%), Gaps = 69/266 (25%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
V +GD +Y K+G G TV+ + D+ VA++ + Q + E+++ +
Sbjct: 14 VSVGDPKK-KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINE 68
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYK 138
+ + N + + ++ L+ + + G + +V E + G +L ++ +
Sbjct: 69 ILVMRENKNPN---------IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET--- 112
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + + ++ L+ L +LH+ ++IH DIK +NIL+ G
Sbjct: 113 CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILL--------------------G 151
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEV 255
M D SVK+ D G I + + T + + EV
Sbjct: 152 M-----------------------DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 188
Query: 256 LIGAGYGPAADIWSTACMAFELATGD 281
+ YGP DIWS MA E+ G+
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 79 RYFFYSSGEK------------KDVVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 125
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 126 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 153
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 154 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 202
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 249
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 106/266 (39%), Gaps = 69/266 (25%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
V +GD +Y K+G G TV+ + D+ VA++ + Q + E+++ +
Sbjct: 13 VSVGDPKK-KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINE 67
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYK 138
+ + N + + ++ L+ + + G + +V E + G +L ++ +
Sbjct: 68 ILVMRENKNPN---------IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET--- 111
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + + ++ L+ L +LH+ ++IH DIK +NIL+ G
Sbjct: 112 CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILL--------------------G 150
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEV 255
M D SVK+ D G I + + T + + EV
Sbjct: 151 M-----------------------DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 187
Query: 256 LIGAGYGPAADIWSTACMAFELATGD 281
+ YGP DIWS MA E+ G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 68/263 (25%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQVYADTARDEIVLLK 79
I +F F+ LG G FS V L+ + A+K + K+ + + +EI +L+
Sbjct: 20 IKKIFEFK----ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLR 75
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ E ++ L + ++ S N ++ M G R++ + Y
Sbjct: 76 KIKH--------------ENIVALEDIYE--SPNHLYLVMQLVSGGELFDRIVEKGFYTE 119
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
++ T+I+QVL+ + YLH + I+H D+KPEN+L ++ + M
Sbjct: 120 ---KDASTLIRQVLDAVYYLH-RMGIVHRDLKPENLLYYSQDEESKIM------------ 163
Query: 200 KLPMSLDSTMSDFSL--LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257
+SDF L ++ +V + AC T Y + EVL
Sbjct: 164 ---------ISDFGLSKMEGKGDV---------MSTAC----------GTPGYVAPEVLA 195
Query: 258 GAGYGPAADIWSTACMAFELATG 280
Y A D WS +A+ L G
Sbjct: 196 QKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 54/219 (24%)
Query: 113 NGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
N T + ++ E V G L +A + + +KQ+L+G++YLH++ RI H D+K
Sbjct: 100 NKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK-RIAHFDLK 156
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
PENI++ D ++ +P +K+ D
Sbjct: 157 PENIMLL--------------------------------DKNVPNP-------RIKLIDF 177
Query: 232 GNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289
G A I+ + F + T ++ + E++ G AD+WS + + L +G F +
Sbjct: 178 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 237
Query: 290 KE---------YSRDDDHLAHIVELVGPIPKEVLSQGKK 319
+E Y D+++ ++ EL + +L + K
Sbjct: 238 QETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPK 276
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 91
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 92 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 138
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 139 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 166
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 167 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 215
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 216 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 262
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 54/219 (24%)
Query: 113 NGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
N T + ++ E V G L +A + + +KQ+L+G++YLH++ RI H D+K
Sbjct: 79 NKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK-RIAHFDLK 135
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
PENI++ D ++ +P +K+ D
Sbjct: 136 PENIMLL--------------------------------DKNVPNP-------RIKLIDF 156
Query: 232 GNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289
G A I+ + F + T ++ + E++ G AD+WS + + L +G F +
Sbjct: 157 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 216
Query: 290 KE---------YSRDDDHLAHIVELVGPIPKEVLSQGKK 319
+E Y D+++ ++ EL + +L + K
Sbjct: 217 QETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPK 255
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 143/377 (37%), Gaps = 118/377 (31%)
Query: 19 PVQI--GDLFNFRYHVIRKLGWGHFSTVWLSWD-LQDKTFVALKIVKSDQVYADTARDEI 75
PV++ G ++++ Y ++ +LG G F V + + FVA I + T ++EI
Sbjct: 41 PVEVKQGSVYDY-YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEI 99
Query: 76 VLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIAR 134
++ N K+I L + F+ + + ++ E + G L IA
Sbjct: 100 SIM--------------NQLHHPKLINLHDAFE----DKYEMVLILEFLSGGELFDRIAA 141
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
DYK + V ++Q EGL ++H I+H DIKPENI MC + ++ +
Sbjct: 142 EDYK-MSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENI-MC----ETKKAS------ 188
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-----QTRQ 249
SVKI D G A ++ DEI T +
Sbjct: 189 ------------------------------SVKIIDFGLATKLN---PDEIVKVTTATAE 215
Query: 250 YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPI 309
+ + E++ G D+W+ + + L +G P AG +D L
Sbjct: 216 FAAPEIVDREPVGFYTDMWAIGVLGYVLLSG---LSPFAG------EDDL---------- 256
Query: 310 PKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHV 369
+TL+ N +R D ++ + + EA DF+ +L
Sbjct: 257 ---------ETLQ------NVKRCD-------WEFDEDAFSSVSPEAK---DFIKNLLQK 291
Query: 370 NQKLRASAADCLRHPWL 386
+ R + D L HPWL
Sbjct: 292 EPRKRLTVHDALEHPWL 308
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + R LG G F V+L+ + + VALK++ Q+ + + L + + ++++H
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ--LRREIEIQAHLHH 82
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
++RL N F Y R ++ + + G L + Q TI+
Sbjct: 83 P--------NILRLYNYF--YDRRRIYLILEYAPRGELYKELQKSCTFDE---QRTATIM 129
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPEN 174
+++ + L Y H + ++IH DIKPEN
Sbjct: 130 EELADALMYCHGK-KVIHRDIKPEN 153
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 52/175 (29%)
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V+ + Q+ L Y+H+ I H DIKP+N+
Sbjct: 124 VKLYMYQLFRSLAYIHS-FGICHRDIKPQNL----------------------------- 153
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-Y 261
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 154 ---------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 249
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 52/175 (29%)
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V+ + Q+ L Y+H+ I H DIKP+N+
Sbjct: 158 VKLYMYQLFRSLAYIHS-FGICHRDIKPQNL----------------------------- 187
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-Y 261
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 188 ---------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 234
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 235 TSSIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 283
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 44/139 (31%)
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
V++GL YL + +I+H D+KP NIL+ +
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRGE----------------------------- 162
Query: 212 FSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWST 270
+K+ D G + + D A+ + TR Y S E L G Y +DIWS
Sbjct: 163 --------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 208
Query: 271 ACMAFELATGDYLFDPKAG 289
E+A G Y +G
Sbjct: 209 GLSLVEMAVGRYPIGSGSG 227
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 159/401 (39%), Gaps = 89/401 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + +G G + V ++D +K VA+K K +V+ D ++ K + R+ +
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIK--KILRVFED-----LIDCKRILREIAI- 105
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRL---IARSDYKGIHIQ-- 143
N + V+++L+ I + +V ++ L + IA SD+K +
Sbjct: 106 ---LNRLNHDHVVKVLD-----------IVIPKDVEKFDELYVVLEIADSDFKKLFRTPV 151
Query: 144 -----NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD-KVRR--MARDATKHH 195
+++T++ +L G+ Y+H+ I+H D+KP N L+ D KV +AR
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHS-AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE 210
Query: 196 KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE- 254
+LP+S D +L V N + + TR YR+ E
Sbjct: 211 NGNSQLPIS--PREDDMNL-----------VTFPHTKN---LKRQLTGHVVTRWYRAPEL 254
Query: 255 VLIGAGYGPAADIWSTACMAFELAT-----------------GDYLF----DPKAGKEYS 293
+L+ Y A D+WS C+ EL G F D KAG ++
Sbjct: 255 ILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFK 314
Query: 294 ----RDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKY 349
+ D L I ++G +E + +K + +R + P L E++
Sbjct: 315 FHTRGNRDQLNVIFNILGTPSEEDIEALEKE--------DAKRYIRIFPKREGTDLAERF 366
Query: 350 HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390
S A+A L ML N R + +CL HP+ R
Sbjct: 367 PASSADA---IHLLKRMLVFNPNKRITINECLAHPFFKEVR 404
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 137/367 (37%), Gaps = 114/367 (31%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDK-TFVA--LKIVKSDQVYADTARDEIVLLKAVGRKS 85
+Y + LG G F V + K T++A +K+ +DQV + EI +L + R
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLV---KKEISILN-IARHR 61
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQN 144
N+ + ++ E+++ M+FE + G ++ I S ++ ++ +
Sbjct: 62 NILHLHESFESMEELV-----------------MIFEFISGLDIFERINTSAFE-LNERE 103
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
+ + + QV E L +LH+ I H DI+PENI+ + RR +
Sbjct: 104 IVSYVHQVCEALQFLHSH-NIGHFDIRPENIIY-----QTRRSS---------------- 141
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGYG 262
++KI + G A + D+F +Y + EV
Sbjct: 142 --------------------TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
A D+WS + + L +G + P
Sbjct: 182 TATDMWSLGTLVYVLLSG-------------------------INP-------------- 202
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
F + N + I+N+ Y E + EA DF D LL +K R +A++ L+
Sbjct: 203 -FLAETNQQIIENIMN-AEYTFDEEAFKEISIEAMDFVDRLLVK---ERKSRMTASEALQ 257
Query: 383 HPWLNPR 389
HPWL +
Sbjct: 258 HPWLKQK 264
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 35/132 (26%)
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ Q LEGL YLH++ RI+H D+K +N+L+ D +
Sbjct: 191 LGQALEGLEYLHSR-RILHGDVKADNVLLSSDGSH-----------------------AA 226
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF + + ++ LG + D+ T + + EV++G D+W
Sbjct: 227 LCDFG--------HAVCLQPDGLGKSLLTGDYIPG---TETHMAPEVVLGRSCDAKVDVW 275
Query: 269 STACMAFELATG 280
S+ CM + G
Sbjct: 276 SSCCMMLHMLNG 287
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 102/271 (37%), Gaps = 67/271 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY ++ +G G+F L D K VA+K ++ A DE V + + +S H
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER-----GAAIDENVQREIINHRSLRH 75
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRT 147
+ ++R FK TH+ ++ E G L I + R
Sbjct: 76 PN---------IVR----FKEVILTPTHLAIIMEYASGGELYERICNAGR--FSEDEARF 120
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q+L G++Y H+ +I H D+K EN L LD
Sbjct: 121 FFQQLLSGVSYCHSM-QICHRDLKLENTL----------------------------LDG 151
Query: 208 TMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GPA 264
+ PA +KI D G + + + T Y + EVL+ Y G
Sbjct: 152 S--------PAPR-----LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKI 198
Query: 265 ADIWSTACMAFELATGDYLF-DPKAGKEYSR 294
AD+WS + + G Y F DP+ ++Y +
Sbjct: 199 ADVWSCGVTLYVMLVGAYPFEDPEEPRDYRK 229
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 106
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 107 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 153
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 154 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 181
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 182 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 230
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 231 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 277
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKLDHCNIVRL 83
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 84 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 130
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 131 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 158
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 159 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 207
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 208 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 254
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 52/175 (29%)
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V+ + Q+ L Y+H+ I H DIKP+N+
Sbjct: 124 VKLYMYQLFRSLAYIHS-FGICHRDIKPQNL----------------------------- 153
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-Y 261
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 154 ---------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 249
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 112
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 113 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 159
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 160 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 187
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 188 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 236
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 237 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 283
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 52/175 (29%)
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V+ + Q+ L Y+H+ I H DIKP+N+
Sbjct: 124 VKLYMYQLFRSLAYIHS-FGICHRDIKPQNL----------------------------- 153
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-Y 261
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 154 ---------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 249
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 52/175 (29%)
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V+ + Q+ L Y+H+ I H DIKP+N+
Sbjct: 203 VKLYMYQLFRSLAYIHS-FGICHRDIKPQNL----------------------------- 232
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-Y 261
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 233 ---------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 279
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 280 TSSIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 328
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 97/256 (37%), Gaps = 68/256 (26%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F V + VA+KI+ R +I L VG+ + N
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILN---------RQKIRSLDVVGK---IRREIQNL- 70
Query: 96 ASEKVIRLLNDFKIYS--RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQV 152
K+ R + K+Y + I MV E V G L I ++ + + R + +Q+
Sbjct: 71 ---KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQI 125
Query: 153 LEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDF 212
L G++Y H ++H D+KPEN+L LD+ M
Sbjct: 126 LSGVDYCHRHM-VVHRDLKPENVL----------------------------LDAHM--- 153
Query: 213 SLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY-GPAADIWS 269
+ KIAD G + + D + Y + EV+ G Y GP DIWS
Sbjct: 154 ------------NAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWS 201
Query: 270 TACMAFELATGDYLFD 285
+ + + L G FD
Sbjct: 202 SGVILYALLCGTLPFD 217
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 114/291 (39%), Gaps = 61/291 (20%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84
LF Y + +G G FS V + + A+KIV + + L +
Sbjct: 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR----- 75
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNL-LRLIARSDYKGIHI 142
+S + ++ LL + YS +G + MVFE M G +L ++ R+D ++
Sbjct: 76 ---EASICHMLKHPHIVELL---ETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYS 128
Query: 143 QNVRT-IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ V + ++Q+LE L Y H IIH D+KP +L+ A+K + +KL
Sbjct: 129 EAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLL-------------ASKENSAPVKL 174
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
+ +++++ + G + T + + EV+ Y
Sbjct: 175 GG------------------FGVAIQLGESGLVA------GGRVGTPHFMAPEVVKREPY 210
Query: 262 GPAADIWSTACMAFELATG--------DYLFDPKAGKEYSRDDDHLAHIVE 304
G D+W + F L +G + LF+ +Y + +HI E
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISE 261
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 114/291 (39%), Gaps = 61/291 (20%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84
LF Y + +G G FS V + + A+KIV + + L +
Sbjct: 23 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR----- 77
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNL-LRLIARSDYKGIHI 142
+S + ++ LL + YS +G + MVFE M G +L ++ R+D ++
Sbjct: 78 ---EASICHMLKHPHIVELL---ETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYS 130
Query: 143 QNVRT-IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ V + ++Q+LE L Y H IIH D+KP +L+ A+K + +KL
Sbjct: 131 EAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLL-------------ASKENSAPVKL 176
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
+ +++++ + G + T + + EV+ Y
Sbjct: 177 GG------------------FGVAIQLGESGLVA------GGRVGTPHFMAPEVVKREPY 212
Query: 262 GPAADIWSTACMAFELATG--------DYLFDPKAGKEYSRDDDHLAHIVE 304
G D+W + F L +G + LF+ +Y + +HI E
Sbjct: 213 GKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISE 263
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 114
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 115 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 161
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 162 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 189
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 190 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 238
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 239 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 285
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 71/293 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G F V+ + VA+K V D+ + + E+ +++ + + V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 116
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKGIHIQNVR 146
+ + EK ++ ++ +V + + Y + R +R+ + + + V+
Sbjct: 117 RYFFYSSGEK------------KDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVK 163
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ Q+ L Y+H+ I H DIKP+N+
Sbjct: 164 LYMYQLFRSLAYIHS-FGICHRDIKPQNL------------------------------- 191
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAG-YGP 263
LLDP V +K+ D G+A + + I +R YR+ E++ GA Y
Sbjct: 192 -------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 240
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
+ D+WS C+ EL G +F +G D L I++++G +E + +
Sbjct: 241 SIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIRE 287
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 125/320 (39%), Gaps = 75/320 (23%)
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKI------------YSRNGTH-ICMVFEVMGYNL 128
GR N+ S ++ + + IRLLN F + H + +V E+M +L
Sbjct: 61 GRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDL 120
Query: 129 LRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
++I I Q+++ + +L GL+ LH + ++H D+ P NIL+ +
Sbjct: 121 AQVI-HDQRIVISPQHIQYFMYHILLGLHVLH-EAGVVHRDLHPGNILLADNN------- 171
Query: 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248
D T+ DF+L A E AD ++ R
Sbjct: 172 -----------------DITICDFNL---ARE------DTADANKTHYVTH--------R 197
Query: 249 QYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG 307
YR+ E+++ G+ D+WS C+ E +F+ KA S + L IVE+VG
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAE------MFNRKALFRGSTFYNQLNKIVEVVG 251
Query: 308 PIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPM 366
PK + + + +P D L+ L V + A A D + M
Sbjct: 252 -TPK-----IEDVVMFSSPSAR----DYLRN-SLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 367 LHVNQKLRASAADCLRHPWL 386
L N + R S LRHP+
Sbjct: 301 LEFNPQRRISTEQALRHPYF 320
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 47/186 (25%)
Query: 23 GDLFNFRYHVIR-KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------------- 67
GD + ++ ++G G + V L+++ D T+ A+K++ ++
Sbjct: 7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGT 66
Query: 68 -------------ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNG 114
+ EI +LK + + V K++ +L+D N
Sbjct: 67 RPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVV-----------KLVEVLDD-----PNE 110
Query: 115 THICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174
H+ MVFE++ N ++ K + R + +++G+ YLH Q +IIH DIKP N
Sbjct: 111 DHLYMVFELV--NQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSN 167
Query: 175 ILMCVD 180
+L+ D
Sbjct: 168 LLVGED 173
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 125/320 (39%), Gaps = 75/320 (23%)
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKI------------YSRNGTH-ICMVFEVMGYNL 128
GR N+ S ++ + + IRLLN F + H + +V E+M +L
Sbjct: 61 GRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDL 120
Query: 129 LRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
++I I Q+++ + +L GL+ LH + ++H D+ P NIL+ +
Sbjct: 121 AQVI-HDQRIVISPQHIQYFMYHILLGLHVLH-EAGVVHRDLHPGNILLADNN------- 171
Query: 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248
D T+ DF+L A E AD ++ R
Sbjct: 172 -----------------DITICDFNL---ARE------DTADANKTHYVTH--------R 197
Query: 249 QYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG 307
YR+ E+++ G+ D+WS C+ E +F+ KA S + L IVE+VG
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAE------MFNRKALFRGSTFYNQLNKIVEVVG 251
Query: 308 PIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPM 366
PK + + + +P D L+ L V + A A D + M
Sbjct: 252 -TPK-----IEDVVMFSSPSAR----DYLRN-SLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 367 LHVNQKLRASAADCLRHPWL 386
L N + R S LRHP+
Sbjct: 301 LEFNPQRRISTEQALRHPYF 320
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
N + ++ +LG G F V+ + + + A K++++ + D IV ++ + +
Sbjct: 10 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDH 67
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+ +++LL Y +G M+ G + ++ D +G+ ++
Sbjct: 68 PY-----------IVKLLG---AYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQ 112
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182
+ +Q+LE LN+LH++ RIIH D+K N+LM ++ D
Sbjct: 113 VVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGD 147
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
N + ++ +LG G F V+ + + + A K++++ + D IV ++ + +
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDH 75
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+ +++LL Y +G M+ G + ++ D +G+ ++
Sbjct: 76 PY-----------IVKLLG---AYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQ 120
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182
+ +Q+LE LN+LH++ RIIH D+K N+LM ++ D
Sbjct: 121 VVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGD 155
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 101/271 (37%), Gaps = 67/271 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY +++ +G G+F L D Q VA+K ++ + + + EI+ +++ R N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL-RHPN-- 76
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRT 147
++R FK TH+ +V E G L I + R
Sbjct: 77 -----------IVR----FKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARF 119
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+Q++ G++Y H ++ H D+K EN L LD
Sbjct: 120 FFQQLISGVSYCHAM-QVCHRDLKLENTL----------------------------LDG 150
Query: 208 TMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEIQTRQYRSVEVLIGAGY-GPA 264
+ PA +KI G + + + T Y + EVL+ Y G
Sbjct: 151 S--------PAPR-----LKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV 197
Query: 265 ADIWSTACMAFELATGDYLF-DPKAGKEYSR 294
AD+WS + + G Y F DP+ K + +
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 228
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 59/280 (21%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG+G TV Q + VA+K + D + D A EI LL +S+ H +
Sbjct: 41 LGYGSSGTVVFQGSFQGRP-VAVKRMLID--FCDIALMEIKLLT----ESDDHPNVIRYY 93
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ-----NVRTIIK 150
SE R L + E+ NL L+ + +++ N ++++
Sbjct: 94 CSETTDRFL-------------YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
Q+ G+ +LH+ +IIH D+KP+NIL+ + T + G + +L +S
Sbjct: 141 QIASGVAHLHS-LKIIHRDLKPQNILVST--------SSRFTADQQTGAE---NLRILIS 188
Query: 211 DFSL---LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQY-RSVEVLIGAGYGPAAD 266
DF L LD + ++ G + W +E R+ RS+ D
Sbjct: 189 DFGLCKKLDSGQXXFRXNLNNPS-GTSGWRAPELLEESTKRRLTRSI------------D 235
Query: 267 IWSTACMAFE-LATGDYLFDPKAGKEYSRDDDHLAHIVEL 305
I+S C+ + L+ G + F G +YSR+ + + I L
Sbjct: 236 IFSMGCVFYYILSKGKHPF----GDKYSRESNIIRGIFSL 271
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 72/268 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKG 139
SS ++ VIRLL+ F+ ++ E M +L I ++
Sbjct: 69 -------SSGFSG-----VIRLLDWFE----RPDSFVLILERMEPVQDLFDFI--TERGA 110
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ + R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 111 LQEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE---------------- 153
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIG 258
+K+ D G+ + D + D TR Y E +
Sbjct: 154 --------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 187
Query: 259 AGY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 100/267 (37%), Gaps = 62/267 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++R LG G F V L + + A+K++K ++ +V LK V +N
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK---------KEIVVRLKQV-EHTNDER 57
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
+ +IR+ F+ + I M+ + + G L L+ +S + +
Sbjct: 58 LMLSIVTHPFIIRMWGTFQ----DAQQIFMIMDYIEGGELFSLLRKSQRFPNPV--AKFY 111
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+V L YLH++ II+ D+KPENIL+ D H
Sbjct: 112 AAEVCLALEYLHSK-DIIYRDLKPENILL------------DKNGH-------------- 144
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+KI D G A ++ D T Y + EV+ Y + D W
Sbjct: 145 -----------------IKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWW 187
Query: 269 STACMAFELATG-DYLFDPKAGKEYSR 294
S + +E+ G +D K Y +
Sbjct: 188 SFGILIYEMLAGYTPFYDSNTMKTYEK 214
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 59/280 (21%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG+G TV Q + VA+K + D + D A EI LL +S+ H +
Sbjct: 41 LGYGSSGTVVFQGSFQGRP-VAVKRMLID--FCDIALMEIKLLT----ESDDHPNVIRYY 93
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ-----NVRTIIK 150
SE R L + E+ NL L+ + +++ N ++++
Sbjct: 94 CSETTDRFL-------------YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
Q+ G+ +LH+ +IIH D+KP+NIL+ + T + G + +L +S
Sbjct: 141 QIASGVAHLHS-LKIIHRDLKPQNILVST--------SSRFTADQQTGAE---NLRILIS 188
Query: 211 DFSL---LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQY-RSVEVLIGAGYGPAAD 266
DF L LD + ++ G + W +E R+ RS+ D
Sbjct: 189 DFGLCKKLDSGQXXFRXNLNNPS-GTSGWRAPELLEESTKRRLTRSI------------D 235
Query: 267 IWSTACMAFE-LATGDYLFDPKAGKEYSRDDDHLAHIVEL 305
I+S C+ + L+ G + F G +YSR+ + + I L
Sbjct: 236 IFSMGCVFYYILSKGKHPF----GDKYSRESNIIRGIFSL 271
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 29/172 (16%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKSN 86
Y +++++G G S V+ + + K A+K V ++D D+ R+EI L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL----- 111
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
Q S+K+IRL D++I + +I MV E +L + + K I +
Sbjct: 112 -------QQHSDKIIRLY-DYEITDQ---YIYMVMECGNIDLNSWLKKK--KSIDPWERK 158
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMC------VDYDKVRRMARDAT 192
+ K +LE ++ +H Q I+H+D+KP N L+ +D+ +M D T
Sbjct: 159 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 209
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 29/172 (16%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKSN 86
Y +++++G G S V+ + + K A+K V ++D D+ R+EI L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL----- 111
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
Q S+K+IRL D++I + +I MV E +L + + K I +
Sbjct: 112 -------QQHSDKIIRLY-DYEITDQ---YIYMVMECGNIDLNSWLKKK--KSIDPWERK 158
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMC------VDYDKVRRMARDAT 192
+ K +LE ++ +H Q I+H+D+KP N L+ +D+ +M D T
Sbjct: 159 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 106/266 (39%), Gaps = 69/266 (25%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
V +GD +Y K+G G TV+ + D+ VA++ + Q + E+++ +
Sbjct: 14 VSVGD-PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINE 68
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYK 138
+ + N + + ++ L+ + + G + +V E + G +L ++ +
Sbjct: 69 ILVMRENKNPN---------IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET--- 112
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + + ++ L+ L +LH+ ++IH +IK +NIL+ G
Sbjct: 113 CMDEGQIAAVCRECLQALEFLHSN-QVIHRNIKSDNILL--------------------G 151
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEV 255
M D SVK+ D G I + + T + + EV
Sbjct: 152 M-----------------------DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 188
Query: 256 LIGAGYGPAADIWSTACMAFELATGD 281
+ YGP DIWS MA E+ G+
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 94/256 (36%), Gaps = 68/256 (26%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F V + VA+KI+ R +I L VG+ + N
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILN---------RQKIRSLDVVGK---IKREIQNL- 65
Query: 96 ASEKVIRLLNDFKIYS--RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQV 152
K+ R + K+Y T MV E V G L I + + + R + +Q+
Sbjct: 66 ---KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEARRLFQQI 120
Query: 153 LEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDF 212
L ++Y H ++H D+KPEN+L LD+ M
Sbjct: 121 LSAVDYCHRHM-VVHRDLKPENVL----------------------------LDAHM--- 148
Query: 213 SLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY-GPAADIWS 269
+ KIAD G + + D D + Y + EV+ G Y GP DIWS
Sbjct: 149 ------------NAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWS 196
Query: 270 TACMAFELATGDYLFD 285
+ + L G FD
Sbjct: 197 CGVILYALLCGTLPFD 212
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 133/373 (35%), Gaps = 112/373 (30%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F Y + +LG G FS V + A I+ + ++ +ARD +K
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDH--------QKL 57
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQN 144
+ ++RL + S G H + V G L ++AR Y +
Sbjct: 58 EREARICRLLKHPNIVRLHDSI---SEEGHHYLIFDLVTGGELFEDIVAREYYSE---AD 111
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
I+Q+LE + + H Q ++H ++KPEN+L+
Sbjct: 112 ASHCIQQILEAVLHCH-QMGVVHRNLKPENLLL--------------------------- 143
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIG 258
A+++ +VK+AD G A ++ FA T Y S EVL
Sbjct: 144 -------------ASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG---TPGYLSPEVLRK 187
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
YG D+W+ + + L G + P + +D H L Q
Sbjct: 188 DPYGKPVDLWACGVILYILLVG---YPP-----FWDEDQHR--------------LYQQI 225
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA 378
K Y P + D + P EA D + ML +N R +AA
Sbjct: 226 KAGAYDFPSPEW---DTVTP----------------EAKDLIN---KMLTINPSKRITAA 263
Query: 379 DCLRHPWLNPRRS 391
+ L+HPW++ R +
Sbjct: 264 EALKHPWISHRST 276
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 95/262 (36%), Gaps = 68/262 (25%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F Y + +LG G FS V A KI+ + ++ +ARD +K
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL---SARDH--------QKL 77
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQN 144
+ ++RL + S G H + V G L ++AR Y +
Sbjct: 78 EREARICRLLKHPNIVRLHDSI---SEEGFHYLVFDLVTGGELFEDIVAREYYSE---AD 131
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
I Q+LE +N++H Q I+H D+KPEN+L+
Sbjct: 132 ASHCIHQILESVNHIH-QHDIVHRDLKPENLLL--------------------------- 163
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIG 258
A++ +VK+AD G A + FA T Y S EVL
Sbjct: 164 -------------ASKCKGAAVKLADFGLAIEVQGEQQAWFGFAG---TPGYLSPEVLRK 207
Query: 259 AGYGPAADIWSTACMAFELATG 280
YG DIW+ + + L G
Sbjct: 208 DPYGKPVDIWACGVILYILLVG 229
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 29/172 (16%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKSN 86
Y +++++G G S V+ + + K A+K V ++D D+ R+EI L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL----- 111
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
Q S+K+IRL + Y +I MV E +L + + K I +
Sbjct: 112 -------QQHSDKIIRLYD----YEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERK 158
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMC------VDYDKVRRMARDAT 192
+ K +LE ++ +H Q I+H+D+KP N L+ +D+ +M D T
Sbjct: 159 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 209
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 107/290 (36%), Gaps = 65/290 (22%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F+ + D K A KIV + R+ K ++ S + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE----------KMSMEISIHRSL 74
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLE 154
A + V+ F + + + +V E+ +LL L R K + R ++Q++
Sbjct: 75 AHQHVV----GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVL 128
Query: 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSL 214
G YLH R+IH D+K N+ +
Sbjct: 129 GCQYLHRN-RVIHRDLKLGNLFL------------------------------------- 150
Query: 215 LDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTA 271
NE D+ VKI D G A ++ + T Y + EVL G+ D+WS
Sbjct: 151 ----NE--DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG 204
Query: 272 CMAFELATGDYLFDPKAGKE-YSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
C+ + L G F+ KE Y R + I + + P+ ++ + +T
Sbjct: 205 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQT 254
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 101/283 (35%), Gaps = 91/283 (32%)
Query: 113 NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
+G H+ +V E+M G LL I R + + ++ + + + YLH+Q ++H D+K
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLHSQ-GVVHRDLK 148
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
P NIL VD R + DF + + L
Sbjct: 149 PSNILY-VDESGNPECLR-------------------ICDFGF------AKQLRAENGLL 182
Query: 232 GNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291
C+ + A E+ RQ GY DIWS + + + G + P A
Sbjct: 183 MTPCYTANFVAPEVLKRQ----------GYDEGCDIWSLGILLYTMLAG---YTPFAN-- 227
Query: 292 YSRDDDHLAHIVELVGP--IPKEVLSQ---GKKTLRYFTPQGNFRRIDNLKPWGLYQVLT 346
GP P+E+L++ GK TL GN+ +
Sbjct: 228 ---------------GPSDTPEEILTRIGSGKFTLS----GGNWNTV------------- 255
Query: 347 EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389
+ D + MLHV+ R +A L+HPW+ +
Sbjct: 256 ---------SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQK 289
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 35/132 (26%)
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ Q LEGL YLH++ RI+H D+K +N+L+ D +
Sbjct: 172 LGQALEGLEYLHSR-RILHGDVKADNVLLSSDGSH-----------------------AA 207
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+ DF + + ++ LG D+ T + + EV++G D+W
Sbjct: 208 LCDFG--------HAVCLQPDGLGKDLLTGDYIPG---TETHMAPEVVLGRSCDAKVDVW 256
Query: 269 STACMAFELATG 280
S+ CM + G
Sbjct: 257 SSCCMMLHMLNG 268
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 107/290 (36%), Gaps = 65/290 (22%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F+ + D K A KIV + R+ K ++ S + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE----------KMSMEISIHRSL 74
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLE 154
A + V+ F + + + +V E+ +LL L R K + R ++Q++
Sbjct: 75 AHQHVV----GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVL 128
Query: 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSL 214
G YLH R+IH D+K N+ +
Sbjct: 129 GCQYLHRN-RVIHRDLKLGNLFL------------------------------------- 150
Query: 215 LDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTA 271
NE D+ VKI D G A ++ + T Y + EVL G+ D+WS
Sbjct: 151 ----NE--DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG 204
Query: 272 CMAFELATGDYLFDPKAGKE-YSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
C+ + L G F+ KE Y R + I + + P+ ++ + +T
Sbjct: 205 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQT 254
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 41/149 (27%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
++V+ + ++ GL++LH+ II+ D+KPENIL+ D H K
Sbjct: 130 EDVKFYLAELALGLDHLHS-LGIIYRDLKPENILL------------DEEGHIK------ 170
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
++DF L + E D K C ++ A E+ RQ G+
Sbjct: 171 ------LTDFGL---SKEAIDHEKKAYSF---CGTVEYMAPEVVNRQ----------GHS 208
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKE 291
+AD WS + FE+ TG F K KE
Sbjct: 209 HSADWWSYGVLMFEMLTGSLPFQGKDRKE 237
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 107/290 (36%), Gaps = 65/290 (22%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F+ + D K A KIV + R+ K ++ S + +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE----------KMSMEISIHRSL 78
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLE 154
A + V+ F + + + +V E+ +LL L R K + R ++Q++
Sbjct: 79 AHQHVV----GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVL 132
Query: 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSL 214
G YLH R+IH D+K N+ +
Sbjct: 133 GCQYLHRN-RVIHRDLKLGNLFL------------------------------------- 154
Query: 215 LDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTA 271
NE D+ VKI D G A ++ + T Y + EVL G+ D+WS
Sbjct: 155 ----NE--DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG 208
Query: 272 CMAFELATGDYLFDPKAGKE-YSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
C+ + L G F+ KE Y R + I + + P+ ++ + +T
Sbjct: 209 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQT 258
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 22/161 (13%)
Query: 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIV 76
+ F Y + LG G F TV+ L D+ VA+K++ ++V + T E+
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 77 LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSD 136
LL VG VIRLL+ F+ ++ G + + + +L I
Sbjct: 87 LLWKVGAGGG----------HPGVIRLLDWFE--TQEGFMLVLERPLPAQDLFDYITEKG 134
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
G R QV+ + + H++ ++H DIK ENIL+
Sbjct: 135 PLGEGPS--RCFFGQVVAAIQHCHSR-GVVHRDIKDENILI 172
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 29/172 (16%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKSN 86
Y +++++G G S V+ + + K A+K V ++D D+ R+EI L +
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL----- 64
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
Q S+K+IRL D++I + +I MV E +L + + K I +
Sbjct: 65 -------QQHSDKIIRLY-DYEITDQ---YIYMVMECGNIDLNSWLKKK--KSIDPWERK 111
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMC------VDYDKVRRMARDAT 192
+ K +LE ++ +H Q I+H+D+KP N L+ +D+ +M D T
Sbjct: 112 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 162
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 101/283 (35%), Gaps = 91/283 (32%)
Query: 113 NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
+G H+ +V E+M G LL I R + + ++ + + + YLH+Q ++H D+K
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLHSQG-VVHRDLK 148
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
P NIL VD R + DF + + L
Sbjct: 149 PSNILY-VDESGNPECLR-------------------ICDFGF------AKQLRAENGLL 182
Query: 232 GNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291
C+ + A E+ RQ GY DIWS + + + G + P A
Sbjct: 183 MTPCYTANFVAPEVLKRQ----------GYDEGCDIWSLGILLYTMLAG---YTPFAN-- 227
Query: 292 YSRDDDHLAHIVELVGP--IPKEVLSQ---GKKTLRYFTPQGNFRRIDNLKPWGLYQVLT 346
GP P+E+L++ GK TL GN+ +
Sbjct: 228 ---------------GPSDTPEEILTRIGSGKFTLS----GGNWNTV------------- 255
Query: 347 EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389
+ D + MLHV+ R +A L+HPW+ +
Sbjct: 256 ---------SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQK 289
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 29/172 (16%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKSN 86
Y +++++G G S V+ + + K A+K V ++D D+ R+EI L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL----- 83
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
Q S+K+IRL + Y +I MV E +L + + K I +
Sbjct: 84 -------QQHSDKIIRLYD----YEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERK 130
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMC------VDYDKVRRMARDAT 192
+ K +LE ++ +H Q I+H+D+KP N L+ +D+ +M D T
Sbjct: 131 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 181
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
NFR V +K+G G+F + L +L +VA+K+ + + A E K +G
Sbjct: 31 NFR--VGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGSGDG 87
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+ Y + G + MV E++G +L L D + ++ V
Sbjct: 88 IPQVYY-----------------FGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVL 129
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187
I Q++ + Y+H++ +I+ D+KPEN L+ +K +++
Sbjct: 130 MIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQV 169
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
NFR V +K+G G+F + L +L +VA+K+ + + A E K +G
Sbjct: 10 NFR--VGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGSGDG 66
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+ Y + G + MV E++G +L L D + ++ V
Sbjct: 67 IPQVYY-----------------FGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVL 108
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187
I Q++ + Y+H++ +I+ D+KPEN L+ +K +++
Sbjct: 109 MIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQV 148
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 109/290 (37%), Gaps = 65/290 (22%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F+ + D K A KIV + R+ K ++ S + +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE----------KMSMEISIHRSL 72
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLE 154
A + V+ F + + + +V E+ +LL L R K + R ++Q++
Sbjct: 73 AHQHVV----GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVL 126
Query: 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSL 214
G YLH R+IH D+K N+ +
Sbjct: 127 GCQYLHRN-RVIHRDLKLGNLFL------------------------------------- 148
Query: 215 LDPANEVYDISVKIADLGNACWID-DHFADEI--QTRQYRSVEVLIGAGYGPAADIWSTA 271
NE D+ VKI D G A ++ D ++ T Y + EVL G+ D+WS
Sbjct: 149 ----NE--DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 202
Query: 272 CMAFELATGDYLFDPKAGKE-YSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
C+ + L G F+ KE Y R + I + + P+ ++ + +T
Sbjct: 203 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQT 252
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 118/282 (41%), Gaps = 59/282 (20%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG+G TV Q + VA+K + D + D A EI LL +S+ H +
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRMLID--FCDIALMEIKLLT----ESDDHPNVIRYY 75
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ-----NVRTIIK 150
SE R L + E+ NL L+ + +++ N ++++
Sbjct: 76 CSETTDRFL-------------YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
Q+ G+ +LH+ +IIH D+KP+NIL+ + T + G + +L +S
Sbjct: 123 QIASGVAHLHS-LKIIHRDLKPQNILVST--------SSRFTADQQTGAE---NLRILIS 170
Query: 211 DFSL---LDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEVLIGAGYGPA 264
DF L LD + ++ G + W +E +QT++ + +
Sbjct: 171 DFGLCKKLDSGQSSFRTNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSI--------- 220
Query: 265 ADIWSTACMAFE-LATGDYLFDPKAGKEYSRDDDHLAHIVEL 305
DI+S C+ + L+ G + F G +YSR+ + + I L
Sbjct: 221 -DIFSMGCVFYYILSKGKHPF----GDKYSRESNIIRGIFSL 257
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 118/282 (41%), Gaps = 59/282 (20%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG+G TV Q + VA+K + D + D A EI LL +S+ H +
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRMLID--FCDIALMEIKLLT----ESDDHPNVIRYY 75
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ-----NVRTIIK 150
SE R L + E+ NL L+ + +++ N ++++
Sbjct: 76 CSETTDRFL-------------YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
Q+ G+ +LH+ +IIH D+KP+NIL+ + T + G + +L +S
Sbjct: 123 QIASGVAHLHS-LKIIHRDLKPQNILVST--------SSRFTADQQTGAE---NLRILIS 170
Query: 211 DFSL---LDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEVLIGAGYGPA 264
DF L LD + ++ G + W +E +QT++ + +
Sbjct: 171 DFGLCKKLDSGQXXFRXNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSI--------- 220
Query: 265 ADIWSTACMAFE-LATGDYLFDPKAGKEYSRDDDHLAHIVEL 305
DI+S C+ + L+ G + F G +YSR+ + + I L
Sbjct: 221 -DIFSMGCVFYYILSKGKHPF----GDKYSRESNIIRGIFSL 257
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
NFR V +K+G G+F + L +L +VA+K+ + + A E K +G
Sbjct: 10 NFR--VGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGSGDG 66
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+ Y + G + MV E++G +L L D + ++ V
Sbjct: 67 IPQVYY-----------------FGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVL 108
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187
I Q++ + Y+H++ +I+ D+KPEN L+ +K +++
Sbjct: 109 MIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQV 148
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 26/153 (16%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKI--VKSDQVYADTARDEIVLLKAVGRK 84
NFR V +K+G G+F + L +L +VA+K+ +KS A E K +
Sbjct: 5 NFR--VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSR---APQLHLEYRFYKQLSAT 59
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
V Y + G + MV E++G +L L D + ++
Sbjct: 60 EGVPQVYY-----------------FGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKT 101
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
V I Q++ + Y+HT+ +I+ D+KPEN L+
Sbjct: 102 VLMIAIQLITRMEYVHTKS-LIYRDVKPENFLV 133
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 109/290 (37%), Gaps = 65/290 (22%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F+ + D K A KIV + R+ K ++ S + +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE----------KMSMEISIHRSL 98
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLE 154
A + V+ F + + + +V E+ +LL L R K + R ++Q++
Sbjct: 99 AHQHVV----GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVL 152
Query: 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSL 214
G YLH R+IH D+K N+ +
Sbjct: 153 GCQYLHRN-RVIHRDLKLGNLFL------------------------------------- 174
Query: 215 LDPANEVYDISVKIADLGNACWID-DHFADEI--QTRQYRSVEVLIGAGYGPAADIWSTA 271
NE D+ VKI D G A ++ D ++ T Y + EVL G+ D+WS
Sbjct: 175 ----NE--DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 228
Query: 272 CMAFELATGDYLFDPKAGKE-YSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
C+ + L G F+ KE Y R + I + + P+ ++ + +T
Sbjct: 229 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQT 278
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 29/172 (16%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKSN 86
Y +++++G G S V+ + + K A+K V ++D D+ R+EI L +
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL----- 67
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
Q S+K+IRL + Y +I MV E +L + + K I +
Sbjct: 68 -------QQHSDKIIRLYD----YEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERK 114
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMC------VDYDKVRRMARDAT 192
+ K +LE ++ +H Q I+H+D+KP N L+ +D+ +M D T
Sbjct: 115 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 165
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 97/263 (36%), Gaps = 70/263 (26%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR----DEIVLLKA 80
L NFR + +K+G G FS V+ + L D VALK V+ + AR EI LLK
Sbjct: 31 LANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 81 VGRKSNVHSSAYNTQASEKVIRL-LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + + A + +E I L L D SR H + +
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHF----------------KKQKRL 132
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + V Q+ L ++H++ R++H DIKP N+ + G+
Sbjct: 133 IPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITA-----------------TGV 174
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEVL 256
VK+ DLG + + T Y S E +
Sbjct: 175 --------------------------VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 257 IGAGYGPAADIWSTACMAFELAT 279
GY +DIWS C+ +E+A
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAA 231
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 109/290 (37%), Gaps = 65/290 (22%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F+ + D K A KIV + R+ K ++ S + +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE----------KMSMEISIHRSL 96
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLE 154
A + V+ F + + + +V E+ +LL L R K + R ++Q++
Sbjct: 97 AHQHVV----GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVL 150
Query: 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSL 214
G YLH R+IH D+K N+ +
Sbjct: 151 GCQYLHRN-RVIHRDLKLGNLFL------------------------------------- 172
Query: 215 LDPANEVYDISVKIADLGNACWID-DHFADEI--QTRQYRSVEVLIGAGYGPAADIWSTA 271
NE D+ VKI D G A ++ D ++ T Y + EVL G+ D+WS
Sbjct: 173 ----NE--DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 226
Query: 272 CMAFELATGDYLFDPKAGKE-YSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
C+ + L G F+ KE Y R + I + + P+ ++ + +T
Sbjct: 227 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQT 276
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 29/172 (16%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKSN 86
Y +++++G G S V+ + + K A+K V ++D D+ R+EI L +
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL----- 63
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
Q S+K+IRL + Y +I MV E +L + + K I +
Sbjct: 64 -------QQHSDKIIRLYD----YEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERK 110
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMC------VDYDKVRRMARDAT 192
+ K +LE ++ +H Q I+H+D+KP N L+ +D+ +M D T
Sbjct: 111 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 161
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 97/254 (38%), Gaps = 63/254 (24%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F+ V+ + + VA+K++ +Y + +++ V + +H +
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY------KAGMVQRVQNEVKIHCQLKHPS 72
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEG 155
++ L N F+ + ++ +V E+ + ++ K R + Q++ G
Sbjct: 73 ----ILELYNYFE----DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG 124
Query: 156 LNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLL 215
+ YLH+ I+H D+ N+L+
Sbjct: 125 MLYLHSHG-ILHRDLTLSNLLL-------------------------------------- 145
Query: 216 DPANEVYDISVKIADLGNACWI----DDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTA 271
++++KIAD G A + + H+ T Y S E+ + +G +D+WS
Sbjct: 146 -----TRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHGLESDVWSLG 199
Query: 272 CMAFELATGDYLFD 285
CM + L G FD
Sbjct: 200 CMFYTLLIGRPPFD 213
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 56/176 (31%)
Query: 121 FEVMGYNLLRLIARSDY----KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
F + ++L+R DY + + R+I++ +LE +++LH I+H D+KPENIL
Sbjct: 174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPENIL 232
Query: 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW 236
LD M ++++D G +C
Sbjct: 233 ----------------------------LDDNM---------------QIRLSDFGFSCH 249
Query: 237 ID--DHFADEIQTRQYRSVEVL------IGAGYGPAADIWSTACMAFELATGDYLF 284
++ + + T Y + E+L GYG D+W+ + F L G F
Sbjct: 250 LEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 126/361 (34%), Gaps = 112/361 (31%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR--DEIVLLKAVGRKSNV 87
Y + +G G F+ V L+ + VA+KI+ + + +D R EI LK + R ++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL-RHQHI 70
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVR 146
+ + + K+ MV E G L I D + + R
Sbjct: 71 CQLYHVLETANKIF-----------------MVLEYCPGGELFDYIISQDR--LSEEETR 111
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ +Q++ + Y+H+Q H D+KPEN+L ++HK+
Sbjct: 112 VVFRQIVSAVAYVHSQ-GYAHRDLKPENLLF--------------DEYHKL--------- 147
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY-GPAA 265
+ DF L GN D H + Y + E++ G Y G A
Sbjct: 148 -KLIDFGLCAKPK------------GNK---DYHLQTCCGSLAYAAPELIQGKSYLGSEA 191
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
D+WS + + L G FD DD+ V++ KK +R
Sbjct: 192 DVWSMGILLYVLMCGFLPFD---------DDN---------------VMALYKKIMR--- 224
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385
KY K + L ML V+ K R S + L HPW
Sbjct: 225 ---------------------GKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263
Query: 386 L 386
+
Sbjct: 264 I 264
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 70 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 112
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 113 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 154
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 155 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 104 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 146
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 147 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 188
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 189 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 223
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQVYADTARDEIVLLKAVGRKSNV 87
+ +I +LG G F V+ + + + A K++ KS++ D EI +L + +
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPN-- 95
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+++LL+ F Y N I + F G + + + + ++
Sbjct: 96 ------------IVKLLDAF--YYENNLWILIEFCAGG--AVDAVMLELERPLTESQIQV 139
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182
+ KQ L+ LNYLH +IIH D+K NIL +D D
Sbjct: 140 VCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGD 173
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQVYADTARDEIVLLKAVGRKSNV 87
+ +I +LG G F V+ + + + A K++ KS++ D EI +L + +
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPN-- 95
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+++LL+ F Y N I + F G + + + + ++
Sbjct: 96 ------------IVKLLDAF--YYENNLWILIEFCAGGA--VDAVMLELERPLTESQIQV 139
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182
+ KQ L+ LNYLH +IIH D+K NIL +D D
Sbjct: 140 VCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGD 173
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQVYADTARDEIVLLKAVGRKSNV 87
+ +I +LG G F V+ + + + A K++ KS++ D EI +L + +
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPN-- 95
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+++LL+ F Y N I + F G + + + + ++
Sbjct: 96 ------------IVKLLDAF--YYENNLWILIEFCAGG--AVDAVMLELERPLTESQIQV 139
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182
+ KQ L+ LNYLH +IIH D+K NIL +D D
Sbjct: 140 VCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGD 173
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 92 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 134
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 135 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 176
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 177 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 211
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 117 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 159
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 160 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 201
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 202 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 236
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 112 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 154
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 155 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 196
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 197 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 85 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 127
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 128 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 169
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 170 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 108/295 (36%), Gaps = 72/295 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI+K + + A+DE+ H+
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI---VAKDEVA-----------HT 57
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
N L K + +C V E G L ++R + R
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFY 115
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L+YLH++ +++ D+K EN+++ D H KI
Sbjct: 116 GAEIVSALDYLHSEKNVVYRDLKLENLML------------DKDGHIKI----------- 152
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L + A + C T +Y + EVL YG A D W
Sbjct: 153 -TDFGLCKEGIK------DGATMKXFCG----------TPEYLAPEVLEDNDYGRAVDWW 195
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL--------VGPIPKEVLS 315
+ +E+ G F Y++D + L ++ + +GP K +LS
Sbjct: 196 GLGVVMYEMMCGRLPF-------YNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 243
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 98 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 140
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 141 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 182
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 183 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 84 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 126
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 127 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 168
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 169 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 203
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 112 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 154
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 155 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 196
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 197 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 98 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 140
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 141 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 182
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 183 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 97 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 139
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 140 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 181
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 182 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 70 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 112
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 113 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 154
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 155 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 85 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 127
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 128 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 169
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 170 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 85 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 127
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 128 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 169
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 170 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 84 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 126
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 127 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 168
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 169 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 203
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 109/295 (36%), Gaps = 72/295 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI+K + + A+DE+ H+
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI---VAKDEVA-----------HT 198
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
N L K + +C V E G L ++R + R
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFY 256
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L+YLH++ +++ D+K EN+++ D H KI
Sbjct: 257 GAEIVSALDYLHSEKNVVYRDLKLENLML------------DKDGHIKI----------- 293
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L + D A + C T +Y + EVL YG A D W
Sbjct: 294 -TDFGLCKEG--IKD----GATMKTFC----------GTPEYLAPEVLEDNDYGRAVDWW 336
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL--------VGPIPKEVLS 315
+ +E+ G F Y++D + L ++ + +GP K +LS
Sbjct: 337 GLGVVMYEMMCGRLPF-------YNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 384
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 108/295 (36%), Gaps = 72/295 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI+K + + A+DE+ H+
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI---VAKDEVA-----------HT 55
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
N L K + +C V E G L ++R + R
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFY 113
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L+YLH++ +++ D+K EN+++ D H KI
Sbjct: 114 GAEIVSALDYLHSEKNVVYRDLKLENLML------------DKDGHIKI----------- 150
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L + A + C T +Y + EVL YG A D W
Sbjct: 151 -TDFGLCKEGIK------DGATMKXFCG----------TPEYLAPEVLEDNDYGRAVDWW 193
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL--------VGPIPKEVLS 315
+ +E+ G F Y++D + L ++ + +GP K +LS
Sbjct: 194 GLGVVMYEMMCGRLPF-------YNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 241
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 97 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 139
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 140 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 181
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 182 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 109/295 (36%), Gaps = 72/295 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI+K + + A+DE+ H+
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI---VAKDEVA-----------HT 195
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
N L K + +C V E G L ++R + R
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFY 253
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L+YLH++ +++ D+K EN+++ D H KI
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLML------------DKDGHIKI----------- 290
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L + D A + C T +Y + EVL YG A D W
Sbjct: 291 -TDFGLCKEG--IKD----GATMKTFC----------GTPEYLAPEVLEDNDYGRAVDWW 333
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL--------VGPIPKEVLS 315
+ +E+ G F Y++D + L ++ + +GP K +LS
Sbjct: 334 GLGVVMYEMMCGRLPF-------YNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 381
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 98 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 140
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 141 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 182
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 183 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 70 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 112
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 113 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 154
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 155 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 108/295 (36%), Gaps = 72/295 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI+K + + A+DE+ H+
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI---VAKDEVA-----------HT 56
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
N L K + +C V E G L ++R + R
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFY 114
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L+YLH++ +++ D+K EN+++ D H KI
Sbjct: 115 GAEIVSALDYLHSEKNVVYRDLKLENLML------------DKDGHIKI----------- 151
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L + A + C T +Y + EVL YG A D W
Sbjct: 152 -TDFGLCKEGIK------DGATMKXFCG----------TPEYLAPEVLEDNDYGRAVDWW 194
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL--------VGPIPKEVLS 315
+ +E+ G F Y++D + L ++ + +GP K +LS
Sbjct: 195 GLGVVMYEMMCGRLPF-------YNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 98 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 140
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 141 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 182
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 183 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 97 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 139
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 140 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 181
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 182 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 97 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 139
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 140 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 181
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 182 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 69 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 111
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 112 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 153
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 154 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 188
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 28/180 (15%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+I++LG G F VW+ +W+ T VA+K +K + ++ +E ++K +
Sbjct: 12 QLIKRLGNGQFGEVWMGTWN--GNTKVAIKTLKPGTMSPESFLEEAQIMKKL-------- 61
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
+K+++L + + S +I + G +LL + + + + + N+ +
Sbjct: 62 ------KHDKLVQL---YAVVSEEPIYIVTEYMNKG-SLLDFLKDGEGRALKLPNLVDMA 111
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENI-----LMCVDYD-KVRRMARDATKHHKIGMKLPM 203
QV G+ Y+ + IH D++ NI L+C D + R+ D + G K P+
Sbjct: 112 AQVAAGMAYIE-RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPI 170
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 48/179 (26%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
I ++ LN+L +IIH DIKP NIL L S +
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNIL------------------------LDRSGNI 165
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADI 267
+ DF + + ++ D K D G ++ D +RQ GY +D+
Sbjct: 166 KLCDFGI---SGQLVDSIAKTRDAGCRPYMAPERIDPSASRQ----------GYDVRSDV 212
Query: 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326
WS +ELATG + + PK + D L +V+ G P+ LS ++ R F+P
Sbjct: 213 WSLGITLYELATGRFPY-PKWNSVF----DQLTQVVK--GDPPQ--LSNSEE--REFSP 260
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-ADTARDEIVLLKAVGRKSNVHSSAYNT 94
LG G F V + +A KI+K+ + + ++EI S N
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI--------------SVMNQ 142
Query: 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLE 154
+I+L + F+ S+N + M + V G L I Y + + +KQ+ E
Sbjct: 143 LDHANLIQLYDAFE--SKNDIVLVMEY-VDGGELFDRIIDESYNLTELDTI-LFMKQICE 198
Query: 155 GLNYLHTQCRIIHTDIKPENILMCVDYD 182
G+ ++H Q I+H D+KPENIL CV+ D
Sbjct: 199 GIRHMH-QMYILHLDLKPENIL-CVNRD 224
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 361 DFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+F+ +L + R SA++ L+HPWL+ + H
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWLSDHKLH 352
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKSN 86
Y +++++G G S V+ + + K A+K V ++D D+ R+EI L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL----- 83
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
Q S+K+IRL + Y +I MV E +L + + K I +
Sbjct: 84 -------QQHSDKIIRLYD----YEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERK 130
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMC------VDYDKVRRMARD 190
+ K +LE ++ +H Q I+H+D+KP N L+ +D+ +M D
Sbjct: 131 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPD 179
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 27/179 (15%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
+++KLG G F VW+ + + T VA+K +K + +E L+K
Sbjct: 16 LVKKLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMK------------ 62
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG-IHIQNVRTIIK 150
T +K++RL + + ++ I ++ E M L +SD G + + +
Sbjct: 63 --TLQHDKLVRL---YAVVTKE-EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA 116
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENI-----LMCVDYD-KVRRMARDATKHHKIGMKLPM 203
Q+ EG+ Y+ + IH D++ N+ LMC D + R+ D + G K P+
Sbjct: 117 QIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 174
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 93/256 (36%), Gaps = 68/256 (26%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F V + VA+KI+ R +I L VG+ + N
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILN---------RQKIRSLDVVGK---IKREIQNL- 65
Query: 96 ASEKVIRLLNDFKIYS--RNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQV 152
K+ R + K+Y T MV E V G L I + + + R + +Q+
Sbjct: 66 ---KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEARRLFQQI 120
Query: 153 LEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDF 212
L ++Y H ++H D+KPEN+L LD+ M
Sbjct: 121 LSAVDYCHRHM-VVHRDLKPENVL----------------------------LDAHM--- 148
Query: 213 SLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY-GPAADIWS 269
+ KIAD G + + D + Y + EV+ G Y GP DIWS
Sbjct: 149 ------------NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWS 196
Query: 270 TACMAFELATGDYLFD 285
+ + L G FD
Sbjct: 197 CGVILYALLCGTLPFD 212
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 65 -------SSGFS-----GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 107
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 108 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 149
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 150 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 52/150 (34%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ R I++ +LE + LH + I+H D+KPENIL
Sbjct: 124 KETRKIMRALLEVICALH-KLNIVHRDLKPENIL-------------------------- 156
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGA- 259
LD D+++K+ D G +C +D + + T Y + E++ +
Sbjct: 157 --LDD---------------DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 199
Query: 260 -----GYGPAADIWSTACMAFELATGDYLF 284
GYG D+WST + + L G F
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 52/150 (34%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ R I++ +LE + LH + I+H D+KPENIL
Sbjct: 111 KETRKIMRALLEVICALH-KLNIVHRDLKPENIL-------------------------- 143
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGA- 259
LD D+++K+ D G +C +D + + T Y + E++ +
Sbjct: 144 --LDD---------------DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 186
Query: 260 -----GYGPAADIWSTACMAFELATGDYLF 284
GYG D+WST + + L G F
Sbjct: 187 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 65 -------SSGFS-----GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 107
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 108 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 149
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 150 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 31/190 (16%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + RK+G G F ++L D+ VA+K+ E V K + ++
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-------------ECV--KTKHPQLHIE 54
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
S Y I + + G + MV E++G +L L K ++ V +
Sbjct: 55 SKIYKMMQGGVGIPTI---RWCGAEGDYNVMVMELLGPSLEDLFNFCSRK-FSLKTVLLL 110
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILM----------CVDYDKVRRMARDATKHHKIG 198
Q++ + Y+H++ IH D+KP+N LM +D+ ++ RDA H I
Sbjct: 111 ADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY-RDARTHQHIP 168
Query: 199 MKLPMSLDST 208
+ +L T
Sbjct: 169 YRENKNLTGT 178
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 23/148 (15%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKI--VKSDQVYADTARDEIVLLKAVGRKSNVHS 89
V +K+G G+F + L +L +VA+K+ +KS A E K +G
Sbjct: 4 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSR---APQLHLEYRFYKQLGSAGEGLP 60
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
Y + G + MV E++G +L L D + ++ V I
Sbjct: 61 QVY----------------YFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIA 103
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q+L + Y+H++ +I+ D+KPEN L+
Sbjct: 104 IQLLSRMEYVHSK-NLIYRDVKPENFLI 130
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 68 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 110
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H C ++H DIK ENIL+ ++ +
Sbjct: 111 QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGE----------------- 152
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 153 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 187
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 43/196 (21%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ + RK+G G F ++L ++Q VA+K+ NV
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL------------------------ENVK 43
Query: 89 SSAYNTQASEKVIRLLN------DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ K+ R+L + + + G + +V +++G +L L K + +
Sbjct: 44 TKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK-LSL 102
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM----------CVDYDKVRRMARDAT 192
+ V + Q++ + ++H++ +H DIKP+N LM +D+ ++ RD +
Sbjct: 103 KTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY-RDTS 160
Query: 193 KHHKIGMKLPMSLDST 208
H I + +L T
Sbjct: 161 THQHIPYRENKNLTGT 176
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 31/190 (16%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + RK+G G F ++L D+ VA+K+ E V K + ++
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-------------ECV--KTKHPQLHIE 52
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
S Y I + + G + MV E++G +L L K ++ V +
Sbjct: 53 SKIYKMMQGGVGIPTI---RWCGAEGDYNVMVMELLGPSLEDLFNFCSRK-FSLKTVLLL 108
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILM----------CVDYDKVRRMARDATKHHKIG 198
Q++ + Y+H++ IH D+KP+N LM +D+ ++ RDA H I
Sbjct: 109 ADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY-RDARTHQHIP 166
Query: 199 MKLPMSLDST 208
+ +L T
Sbjct: 167 YRENKNLTGT 176
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 100/276 (36%), Gaps = 83/276 (30%)
Query: 113 NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
+G ++ +V E+ G LL I R + + ++ + + + YLH Q ++H D+K
Sbjct: 87 DGKYVYVVTELXKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHAQG-VVHRDLK 143
Query: 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231
P NIL + P S+ + DF + + L
Sbjct: 144 PSNILYVDESGN------------------PESI--RICDFGF------AKQLRAENGLL 177
Query: 232 GNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291
C+ + A E+ RQ GY A DIWS + + TG + P A
Sbjct: 178 XTPCYTANFVAPEVLERQ----------GYDAACDIWSLGVLLYTXLTG---YTPFA--- 221
Query: 292 YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHW 351
+ DD I+ +G GK F+ G + W
Sbjct: 222 -NGPDDTPEEILARIG--------SGK-----FSLSGGY--------------------W 247
Query: 352 SKAEASDFA-DFLLPMLHVNQKLRASAADCLRHPWL 386
+ SD A D + LHV+ R +AA LRHPW+
Sbjct: 248 N--SVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 133/369 (36%), Gaps = 112/369 (30%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + +G G FS V L A KI+ + ++ +ARD + + R++ +
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL---SARDH----QKLEREARICR 58
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQNVRTI 148
++ ++RL + S G H + V G L ++AR Y +
Sbjct: 59 LLKHSN----IVRLHDSI---SEEGFHYLVFDLVTGGELFEDIVAREYYSE---ADASHC 108
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
I+Q+LE + + H Q ++H D+KPEN+L+
Sbjct: 109 IQQILEAVLHCH-QMGVVHRDLKPENLLL------------------------------- 136
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIGAGYG 262
A++ +VK+AD G A + FA T Y S EVL YG
Sbjct: 137 ---------ASKCKGAAVKLADFGLAIEVQGDQQAWFGFAG---TPGYLSPEVLRKEAYG 184
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
DIW+ + + L G + P + +D H L Q K
Sbjct: 185 KPVDIWACGVILYILLVG---YPP-----FWDEDQH--------------KLYQQIKAGA 222
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
Y P + D + P EA + + ML +N R +A + L+
Sbjct: 223 YDFPSPEW---DTVTP----------------EAKNLIN---QMLTINPAKRITAHEALK 260
Query: 383 HPWLNPRRS 391
HPW+ R +
Sbjct: 261 HPWVCQRST 269
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 27/179 (15%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++++LG G F VW+ + + T VA+K +K + +E L+K
Sbjct: 17 LVKRLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMK------------ 63
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG-IHIQNVRTIIK 150
T +K++RL + + +R I ++ E M L +SD G + + +
Sbjct: 64 --TLQHDKLVRL---YAVVTRE-EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 117
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENI-----LMCVDYD-KVRRMARDATKHHKIGMKLPM 203
Q+ EG+ Y+ + IH D++ N+ LMC D + R+ D + G K P+
Sbjct: 118 QIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 175
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 52/150 (34%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ R I++ +LE + LH + I+H D+KPENIL
Sbjct: 124 KETRKIMRALLEVICALH-KLNIVHRDLKPENIL-------------------------- 156
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGA- 259
LD D+++K+ D G +C +D + T Y + E++ +
Sbjct: 157 --LDD---------------DMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSM 199
Query: 260 -----GYGPAADIWSTACMAFELATGDYLF 284
GYG D+WST + + L G F
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 98/258 (37%), Gaps = 61/258 (23%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F+ Y V +LG G FS V A KI+ + ++ +ARD + + R++
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARD----FQKLEREA 56
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQN 144
+ + ++RL + + H + V G L ++AR Y +
Sbjct: 57 RICRKLQHPN----IVRLHDSIQ---EESFHYLVFDLVTGGELFEDIVAREFYSE---AD 106
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
I+Q+LE + Y H+ I+H ++KPEN+L+
Sbjct: 107 ASHCIQQILESIAYCHSN-GIVHRNLKPENLLL--------------------------- 138
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQTRQYRSVEVLIGAGYG 262
A++ +VK+AD G A ++D A T Y S EVL Y
Sbjct: 139 -------------ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 263 PAADIWSTACMAFELATG 280
DIW+ + + L G
Sbjct: 186 KPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 98/258 (37%), Gaps = 61/258 (23%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F+ Y V +LG G FS V A KI+ + ++ +ARD + + R++
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARD----FQKLEREA 55
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQN 144
+ + ++RL + + H + V G L ++AR Y +
Sbjct: 56 RICRKLQHPN----IVRLHDSIQ---EESFHYLVFDLVTGGELFEDIVAREFYSE---AD 105
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
I+Q+LE + Y H+ I+H ++KPEN+L+
Sbjct: 106 ASHCIQQILESIAYCHSN-GIVHRNLKPENLLL--------------------------- 137
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQTRQYRSVEVLIGAGYG 262
A++ +VK+AD G A ++D A T Y S EVL Y
Sbjct: 138 -------------ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 184
Query: 263 PAADIWSTACMAFELATG 280
DIW+ + + L G
Sbjct: 185 KPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 98/258 (37%), Gaps = 61/258 (23%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F+ Y V +LG G FS V A KI+ + ++ +ARD + + R++
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARD----FQKLEREA 56
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQN 144
+ + ++RL + + H + V G L ++AR Y +
Sbjct: 57 RICRKLQHPN----IVRLHDSIQ---EESFHYLVFDLVTGGELFEDIVAREFYSE---AD 106
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
I+Q+LE + Y H+ I+H ++KPEN+L+
Sbjct: 107 ASHCIQQILESIAYCHSN-GIVHRNLKPENLLL--------------------------- 138
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQTRQYRSVEVLIGAGYG 262
A++ +VK+AD G A ++D A T Y S EVL Y
Sbjct: 139 -------------ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 263 PAADIWSTACMAFELATG 280
DIW+ + + L G
Sbjct: 186 KPVDIWACGVILYILLVG 203
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 133/370 (35%), Gaps = 112/370 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y + + LG G V L+++ + VA+KI+ + +AR+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE--------------A 56
Query: 89 SSAYNTQASEKVIRLLND---FKIYSR-NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQ 143
A N + ++++ LN KI + + +V E+M G L + + K +
Sbjct: 57 DPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEA 114
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ Q+L + YLH IIH D+KPEN+L+
Sbjct: 115 TCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLL-------------------------- 147
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG--- 258
+++ D +KI D G++ + + T Y + EVL+
Sbjct: 148 --------------SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
AGY A D WS + F +G Y +H + K+ ++ GK
Sbjct: 194 AGYNRAVDCWSLGVILFICLSG-----------YPPFSEHRTQVS------LKDQITSGK 236
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASA 377
F P+ W AE S+ A D + +L V+ K R +
Sbjct: 237 YN---FIPE----------VW--------------AEVSEKALDLVKKLLVVDPKARFTT 269
Query: 378 ADCLRHPWLN 387
+ LRHPWL
Sbjct: 270 EEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 133/370 (35%), Gaps = 112/370 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y + + LG G V L+++ + VA+KI+ + +AR+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE--------------A 56
Query: 89 SSAYNTQASEKVIRLLND---FKIYSR-NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQ 143
A N + ++++ LN KI + + +V E+M G L + + K +
Sbjct: 57 DPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEA 114
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ Q+L + YLH IIH D+KPEN+L+
Sbjct: 115 TCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLL-------------------------- 147
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG--- 258
+++ D +KI D G++ + + T Y + EVL+
Sbjct: 148 --------------SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
AGY A D WS + F +G Y +H + K+ ++ GK
Sbjct: 194 AGYNRAVDCWSLGVILFICLSG-----------YPPFSEHRTQVS------LKDQITSGK 236
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASA 377
F P+ W AE S+ A D + +L V+ K R +
Sbjct: 237 YN---FIPE----------------------VW--AEVSEKALDLVKKLLVVDPKARFTT 269
Query: 378 ADCLRHPWLN 387
+ LRHPWL
Sbjct: 270 EEALRHPWLQ 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 133/370 (35%), Gaps = 112/370 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y + + LG G V L+++ + VA+KI+ + +AR+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE--------------A 56
Query: 89 SSAYNTQASEKVIRLLND---FKIYSR-NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQ 143
A N + ++++ LN KI + + +V E+M G L + + K +
Sbjct: 57 DPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEA 114
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ Q+L + YLH IIH D+KPEN+L+
Sbjct: 115 TCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLL-------------------------- 147
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG--- 258
+++ D +KI D G++ + + T Y + EVL+
Sbjct: 148 --------------SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
AGY A D WS + F +G Y +H + K+ ++ GK
Sbjct: 194 AGYNRAVDCWSLGVILFICLSG-----------YPPFSEHRTQVS------LKDQITSGK 236
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASA 377
F P+ W AE S+ A D + +L V+ K R +
Sbjct: 237 YN---FIPE----------VW--------------AEVSEKALDLVKKLLVVDPKARFTT 269
Query: 378 ADCLRHPWLN 387
+ LRHPWL
Sbjct: 270 EEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 133/370 (35%), Gaps = 112/370 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y + + LG G V L+++ + VA+KI+ + +AR+
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE--------------A 62
Query: 89 SSAYNTQASEKVIRLLND---FKIYSR-NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQ 143
A N + ++++ LN KI + + +V E+M G L + + K +
Sbjct: 63 DPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEA 120
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ Q+L + YLH IIH D+KPEN+L+
Sbjct: 121 TCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLL-------------------------- 153
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG--- 258
+++ D +KI D G++ + + T Y + EVL+
Sbjct: 154 --------------SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 199
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
AGY A D WS + F +G Y +H + K+ ++ GK
Sbjct: 200 AGYNRAVDCWSLGVILFICLSG-----------YPPFSEHRTQVS------LKDQITSGK 242
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASA 377
F P+ W AE S+ A D + +L V+ K R +
Sbjct: 243 YN---FIPE----------VW--------------AEVSEKALDLVKKLLVVDPKARFTT 275
Query: 378 ADCLRHPWLN 387
+ LRHPWL
Sbjct: 276 EEALRHPWLQ 285
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 116 NLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 172
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +K+AD G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 173 LLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 278 ATG 280
A G
Sbjct: 233 AAG 235
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 133/370 (35%), Gaps = 112/370 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y + + LG G V L+++ + VA+KI+ + +AR+
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE--------------A 55
Query: 89 SSAYNTQASEKVIRLLND---FKIYSR-NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQ 143
A N + ++++ LN KI + + +V E+M G L + + K +
Sbjct: 56 DPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEA 113
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ Q+L + YLH IIH D+KPEN+L+
Sbjct: 114 TCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLL-------------------------- 146
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG--- 258
+++ D +KI D G++ + + T Y + EVL+
Sbjct: 147 --------------SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 192
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
AGY A D WS + F +G Y +H + K+ ++ GK
Sbjct: 193 AGYNRAVDCWSLGVILFICLSG-----------YPPFSEHRTQVS------LKDQITSGK 235
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASA 377
F P+ W AE S+ A D + +L V+ K R +
Sbjct: 236 YN---FIPE----------VW--------------AEVSEKALDLVKKLLVVDPKARFTT 268
Query: 378 ADCLRHPWLN 387
+ LRHPWL
Sbjct: 269 EEALRHPWLQ 278
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 98/258 (37%), Gaps = 61/258 (23%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F+ Y V +LG G FS V A KI+ + ++ +ARD + + R++
Sbjct: 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARD----FQKLEREA 79
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQN 144
+ + ++RL + + H + V G L ++AR Y +
Sbjct: 80 RICRKLQHPN----IVRLHDSIQ---EESFHYLVFDLVTGGELFEDIVAREFYSE---AD 129
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
I+Q+LE + Y H+ I+H ++KPEN+L+
Sbjct: 130 ASHCIQQILESIAYCHSNG-IVHRNLKPENLLL--------------------------- 161
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQTRQYRSVEVLIGAGYG 262
A++ +VK+AD G A ++D A T Y S EVL Y
Sbjct: 162 -------------ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 208
Query: 263 PAADIWSTACMAFELATG 280
DIW+ + + L G
Sbjct: 209 KPVDIWACGVILYILLVG 226
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 36/180 (20%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQVYADTARDEIVLLKAVGRKSNV 87
Y V R++G G F ++ +L + VA+K +SD A RDE K + + +
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGI 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ Y + + G H +V +++G +L L+ K ++ V
Sbjct: 68 PNVYY-----------------FGQEGLHNVLVIDLLGPSLEDLLDLCGRK-FSVKTVAM 109
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM------------CVDYDKVRRMARDATKHH 195
KQ+L + +H + +++ DIKP+N L+ VD+ V+ TK H
Sbjct: 110 AAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH 168
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 149/366 (40%), Gaps = 85/366 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y ++RKLG G +S V F A+ I +++V +
Sbjct: 45 YQLVRKLGRGKYSEV----------FEAINITNNERVVVKIL-----KPVKKKKIKREVK 89
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ----NV 145
N + +I+L++ K +VFE I +D+K ++ ++
Sbjct: 90 ILENLRGGTNIIKLIDTVK--DPVSKTPALVFEY--------INNTDFKQLYQILTDFDI 139
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
R + ++L+ L+Y H++ I+H D+KP N+++ H + ++L +
Sbjct: 140 RFYMYELLKALDYCHSKG-IMHRDVKPHNVMI---------------DHQQKKLRL---I 180
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
D +++F PA E +V++A +R ++ E+L+ Y +
Sbjct: 181 DWGLAEF--YHPAQEY---NVRVA-----------------SRYFKGPELLVDYQMYDYS 218
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVLSQGKKTLRY 323
D+WS CM LA+ + +P + +D+ D L I +++G +E+ KK
Sbjct: 219 LDMWSLGCM---LASMIFRREPFF---HGQDNYDQLVRIAKVLG--TEELYGYLKKYHID 270
Query: 324 FTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
P N + K W + + +E H EA D D LL H + R +A + +
Sbjct: 271 LDPHFNDILGQHSRKRWENF-IHSENRHLVSPEALDLLDKLLRYDH---QQRLTAKEAME 326
Query: 383 HPWLNP 388
HP+ P
Sbjct: 327 HPYFYP 332
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 36/180 (20%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQVYADTARDEIVLLKAVGRKSNV 87
Y V R++G G F ++ +L + VA+K +SD A RDE K + + +
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGI 68
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ Y + + G H +V +++G +L L+ K ++ V
Sbjct: 69 PNVYY-----------------FGQEGLHNVLVIDLLGPSLEDLLDLCGRK-FSVKTVAM 110
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM------------CVDYDKVRRMARDATKHH 195
KQ+L + +H + +++ DIKP+N L+ VD+ V+ TK H
Sbjct: 111 AAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH 169
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 148/362 (40%), Gaps = 77/362 (21%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y ++RKLG G +S V F A+ I +++V +
Sbjct: 40 YQLVRKLGRGKYSEV----------FEAINITNNERVVVKIL-----KPVKKKKIKREVK 84
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N + +I+L++ K +VFE + + + Y+ + ++R +
Sbjct: 85 ILENLRGGTNIIKLIDTVK--DPVSKTPALVFEYINNTDFKQL----YQILTDFDIRFYM 138
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H++ I+H D+KP N+++ H + ++L +D +
Sbjct: 139 YELLKALDYCHSKG-IMHRDVKPHNVMI---------------DHQQKKLRL---IDWGL 179
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F PA E +V++A +R ++ E+L+ Y + D+W
Sbjct: 180 AEF--YHPAQEY---NVRVA-----------------SRYFKGPELLVDYQMYDYSLDMW 217
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327
S CM LA+ + +P + +D+ D L I +++G +E+ KK P
Sbjct: 218 SLGCM---LASMIFRREPFF---HGQDNYDQLVRIAKVLG--TEELYGYLKKYHIDLDPH 269
Query: 328 GN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
N + K W + + +E H EA D D LL H + R +A + + HP+
Sbjct: 270 FNDILGQHSRKRWENF-IHSENRHLVSPEALDLLDKLLRYDH---QQRLTAKEAMEHPYF 325
Query: 387 NP 388
P
Sbjct: 326 YP 327
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 33 IRKLGWGHFSTV----WLSWDLQDKTFVALKIVKSDQVYADTAR--DEIVLLKAVGRKSN 86
++ LG G F TV W+ K VA+K+++ + DE ++ VG
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG---- 77
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
S V RLL + + +V ++M Y L R + + Q++
Sbjct: 78 ----------SPYVSRLLGICLT-----STVQLVTQLMPYGCLLDHVRENRGRLGSQDLL 122
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILM-------CVDYDKVRRMARDATKHHKIGM 199
Q+ +G++YL R++H D+ N+L+ D+ R + D T++H G
Sbjct: 123 NWCMQIAKGMSYLE-DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG 181
Query: 200 KLP---MSLDSTM 209
K+P M+L+S +
Sbjct: 182 KVPIKWMALESIL 194
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 98/261 (37%), Gaps = 77/261 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ I+ +G G F V L ++ A+KI+ + ++V LK + N
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILD---------KQKVVKLKQIEHTLN-- 90
Query: 89 SSAYNTQASEKVIRLLN-----DFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKG 139
+++++ +N + ++ +++ MV E M ++ LR I R
Sbjct: 91 --------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR----- 137
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ R Q++ YLH+ +I+ D+KPEN+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENL------------------------ 172
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
L+D +K+AD G A + T +Y + E+++
Sbjct: 173 --------------LIDQQG-----YIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 260 GYGPAADIWSTACMAFELATG 280
GY A D W+ + +E+A G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 98/261 (37%), Gaps = 77/261 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ I+ +G G F V L ++ A+KI+ + ++V LK + N
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILD---------KQKVVKLKQIEHTLN-- 90
Query: 89 SSAYNTQASEKVIRLLN-----DFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKG 139
+++++ +N + ++ +++ MV E M ++ LR I R
Sbjct: 91 --------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR----- 137
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ R Q++ YLH+ +I+ D+KPEN+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENL------------------------ 172
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
L+D +K+AD G A + T +Y + E+++
Sbjct: 173 --------------LIDQQG-----YIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 260 GYGPAADIWSTACMAFELATG 280
GY A D W+ + +E+A G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +K+AD G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 115 THICMVFEVMGYNLLRL-IARSDYKGIHIQNVRTII--KQVLEGLNYLHTQCRIIHTDIK 171
T +C+V +M +R I D Q R I Q++ GL +LH Q II+ D+K
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLK 316
Query: 172 PENILM 177
PEN+L+
Sbjct: 317 PENVLL 322
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 115 THICMVFEVMGYNLLRL-IARSDYKGIHIQNVRTII--KQVLEGLNYLHTQCRIIHTDIK 171
T +C+V +M +R I D Q R I Q++ GL +LH Q II+ D+K
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLK 316
Query: 172 PENILM 177
PEN+L+
Sbjct: 317 PENVLL 322
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 115 THICMVFEVMGYNLLRL-IARSDYKGIHIQNVRTII--KQVLEGLNYLHTQCRIIHTDIK 171
T +C+V +M +R I D Q R I Q++ GL +LH Q II+ D+K
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLK 316
Query: 172 PENILM 177
PEN+L+
Sbjct: 317 PENVLL 322
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 41/139 (29%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ + T+ + VL+ L YLH Q +IH DIK ++IL+ +D +V+
Sbjct: 141 EQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLD-GRVK----------------- 181
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
+SDF A D+ + +G W+ A E+ +R + EV
Sbjct: 182 ------LSDFGFC--AQISKDVPKRKXLVGTPYWM----APEVISRSLYATEV------- 222
Query: 263 PAADIWSTACMAFELATGD 281
DIWS M E+ G+
Sbjct: 223 ---DIWSLGIMVIEMVDGE 238
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 69/195 (35%), Gaps = 52/195 (26%)
Query: 105 NDFKIYSRNGTHICMVFE-VMGYNLLRLIARSD----YKGIHIQNVRTIIKQVLEGLNYL 159
N K+Y +C+V E G +L ++ ++ Y H + Q +G+ YL
Sbjct: 62 NIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAH---AMSWCLQCSQGVAYL 118
Query: 160 HTQC--RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDP 217
H+ +IH D+KP N+L+
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAG------------------------------------- 141
Query: 218 ANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+KI D G AC I H + + + + EV G+ Y D++S + +E+
Sbjct: 142 -----GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196
Query: 278 ATGDYLFDPKAGKEY 292
T FD G +
Sbjct: 197 ITRRKPFDEIGGPAF 211
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+Y + RK+G G F ++L ++ VA+K+ E V K + ++
Sbjct: 10 KYRLGRKIGSGSFGDIYLGANIASGEEVAIKL-------------ECV--KTKHPQLHIE 54
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
S Y I K G + MV E++G +L L K ++ V +
Sbjct: 55 SKFYKMMQGGVGI---PSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK-FSLKTVLLL 110
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILM----------CVDYDKVRRMARDATKHHKIG 198
Q++ + Y+H++ IH D+KP+N LM +D+ ++ RDA H I
Sbjct: 111 ADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY-RDARTHQHIP 168
Query: 199 MKLPMSLDST 208
+ +L T
Sbjct: 169 YRENKNLTGT 178
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 115 THICMVFEVMGYNLLRL-IARSDYKGIHIQNVRTII--KQVLEGLNYLHTQCRIIHTDIK 171
T +C+V +M +R I D Q R I Q++ GL +LH Q II+ D+K
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLK 316
Query: 172 PENILM 177
PEN+L+
Sbjct: 317 PENVLL 322
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 69/195 (35%), Gaps = 52/195 (26%)
Query: 105 NDFKIYSRNGTHICMVFE-VMGYNLLRLIARSD----YKGIHIQNVRTIIKQVLEGLNYL 159
N K+Y +C+V E G +L ++ ++ Y H + Q +G+ YL
Sbjct: 63 NIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAH---AMSWCLQCSQGVAYL 119
Query: 160 HTQC--RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDP 217
H+ +IH D+KP N+L+
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAG------------------------------------- 142
Query: 218 ANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+KI D G AC I H + + + + EV G+ Y D++S + +E+
Sbjct: 143 -----GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197
Query: 278 ATGDYLFDPKAGKEY 292
T FD G +
Sbjct: 198 ITRRKPFDEIGGPAF 212
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 150 KQVLEGLNY-LHTQCRIIHTDIKPENILMCVDY-------DKVRRMARDATKHHK----- 196
K++L+ +N+ T+ D N+ M ++Y +RR+ R + H +
Sbjct: 93 KRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 197 --IGMKLPMSLDSTMSDFSLLDPANEVYDIS--VKIADLGNACWIDDHFADEIQTRQYRS 252
+ + SLD D L P N + D +K+ D G A + T +Y +
Sbjct: 151 IVLTFEYLHSLDLIYRD---LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATG 280
E+++ GY A D W+ + +E+A G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 25 LFNFRYHVIRKLGWGHFSTV----WLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA 80
L + I+ LG G F TV W+ + K VA+K ++ + + A EI+
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEIL---- 67
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI 140
++ V +S N V RLL + + ++ ++M + L R I
Sbjct: 68 --DEAYVMASVDNPH----VCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNI 116
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM-------CVDYDKVRRMARDATK 193
Q + Q+ +G+NYL + R++H D+ N+L+ D+ + + + + +
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
Query: 194 HHKIGMKLP---MSLDSTM 209
+H G K+P M+L+S +
Sbjct: 176 YHAEGGKVPIKWMALESIL 194
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 150 KQVLEGLNY-LHTQCRIIHTDIKPENILMCVDY-------DKVRRMARDATKHHK----- 196
K++L+ +N+ T+ D N+ M ++Y +RR+ R + H +
Sbjct: 93 KRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 197 --IGMKLPMSLDSTMSDFSLLDPANEVYDIS--VKIADLGNACWIDDHFADEIQTRQYRS 252
+ + SLD D L P N + D +K+ D G A + T +Y +
Sbjct: 151 IVLTFEYLHSLDLIYRD---LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATG 280
E+++ GY A D W+ + +E+A G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 25 LFNFRYHVIRKLGWGHFSTV----WLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA 80
L + I+ LG G F TV W+ + K VA+K ++ + + A EI+
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEIL---- 67
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI 140
++ V +S N V RLL + + ++ ++M + L R I
Sbjct: 68 --DEAYVMASVDNPH----VCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNI 116
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM-------CVDYDKVRRMARDATK 193
Q + Q+ +G+NYL + R++H D+ N+L+ D+ + + + + +
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
Query: 194 HHKIGMKLP---MSLDSTM 209
+H G K+P M+L+S +
Sbjct: 176 YHAEGGKVPIKWMALESIL 194
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 25/150 (16%)
Query: 35 KLGWGHFSTVWLSWDLQDKTFVA------LKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++G G F TV+ D + VA K+ KS++ ++E LK + +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER---QRFKEEAEXLKGLQHPN--- 86
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
++R + ++ + I +V E+ L+ + +K I+ +R+
Sbjct: 87 -----------IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR-FKVXKIKVLRSW 134
Query: 149 IKQVLEGLNYLHTQC-RIIHTDIKPENILM 177
+Q+L+GL +LHT+ IIH D+K +NI +
Sbjct: 135 CRQILKGLQFLHTRTPPIIHRDLKCDNIFI 164
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 125/364 (34%), Gaps = 111/364 (30%)
Query: 30 YHVIRKLGWGHFSTVW-LSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y + +LG G F V ++ F A ++ + +T R EI + + +
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT--- 109
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRT 147
++ L + F+ + + M++E M G L +A K + V
Sbjct: 110 -----------LVNLHDAFE----DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE- 153
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++QV +GL ++H + +H D+KPENI+ S +
Sbjct: 154 YMRQVCKGLCHMH-ENNYVHLDLKPENIMFTTK----------------------RSNEL 190
Query: 208 TMSDFSL---LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
+ DF L LDP SVK+ T ++ + EV G G
Sbjct: 191 KLIDFGLTAHLDPKQ-----SVKVT---------------TGTAEFAAPEVAEGKPVGYY 230
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
D+WS +++ L +G P G+ DD+ L ++ K+ +
Sbjct: 231 TDMWSVGVLSYILLSG---LSPFGGE---NDDETLRNV----------------KSCDWN 268
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
F I + D DF+ +L + R + L HP
Sbjct: 269 MDDSAFSGI----------------------SEDGKDFIRKLLLADPNTRMTIHQALEHP 306
Query: 385 WLNP 388
WL P
Sbjct: 307 WLTP 310
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 101/268 (37%), Gaps = 68/268 (25%)
Query: 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAY 92
++++G G F V L + L +K VA+K +K + D +E ++ +
Sbjct: 32 VQEIGSGQFGLVHLGYWL-NKDKVAIKTIKEGSMSEDDFIEEAEVMMKL----------- 79
Query: 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQV 152
+ K+++L IC+VFE M + L R+ + + + V
Sbjct: 80 ---SHPKLVQLYG----VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 132
Query: 153 LEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDF 212
EG+ YL C +IH D+ N L+
Sbjct: 133 CEGMAYLEEAC-VIHRDLAARNCLV----------------------------------- 156
Query: 213 SLLDPANEVYDISVKIADLGNACWI-DDHFADEIQTR---QYRSVEVLIGAGYGPAADIW 268
N+V +K++D G ++ DD + T+ ++ S EV + Y +D+W
Sbjct: 157 ----GENQV----IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 269 STACMAFEL-ATGDYLFDPKAGKEYSRD 295
S + +E+ + G ++ ++ E D
Sbjct: 209 SFGVLMWEVFSEGKIPYENRSNSEVVED 236
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 133/368 (36%), Gaps = 112/368 (30%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + + LG G V L+++ + VA++I+ + +AR+
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSARE--------------AD 182
Query: 90 SAYNTQASEKVIRLLND---FKIYSR-NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQN 144
A N + ++++ LN KI + + +V E+M G L + + K +
Sbjct: 183 PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEAT 240
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
+ Q+L + YLH IIH D+KPEN+L+
Sbjct: 241 CKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLL--------------------------- 272
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG---A 259
+++ D +KI D G++ + + T Y + EVL+ A
Sbjct: 273 -------------SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 319
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
GY A D WS + F +G Y +H + K+ ++ GK
Sbjct: 320 GYNRAVDCWSLGVILFICLSG-----------YPPFSEHRTQVS------LKDQITSGK- 361
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAA 378
Y + E + AE S+ A D + +L V+ K R +
Sbjct: 362 ----------------------YNFIPEVW----AEVSEKALDLVKKLLVVDPKARFTTE 395
Query: 379 DCLRHPWL 386
+ LRHPWL
Sbjct: 396 EALRHPWL 403
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 215 LDPANEVYD--ISVKIADLGNACWI--DDHFADE-IQTRQYRSVEVLIGAGYGPAADIWS 269
L PAN D +VK+ D G A + D+ FA E + T Y S E + Y +DIWS
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 270 TACMAFELA 278
C+ +EL
Sbjct: 202 LGCLLYELC 210
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++R +G G ++ V L + A+K+VK + V D D + K V +++ H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
++ L + F+ SR + V E V G +L+ + R + + ++ R
Sbjct: 82 F---------LVGLHSCFQTESR----LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFY 126
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
++ LNYLH + II+ D+K +N+L+ D+ H K
Sbjct: 127 SAEISLALNYLHERG-IIYRDLKLDNVLL------------DSEGHIK------------ 161
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
++D+ + D + N Y + E+L G YG + D W
Sbjct: 162 LTDYGMCKEGLRPGDTTSXFCGTPN----------------YIAPEILRGEDYGFSVDWW 205
Query: 269 STACMAFELATGDYLFDPKAGKEY--SRDDDHLAHIV-ELVGPIPKEVLSQGKKTLRYFT 325
+ + FE+ G FD + +D+L ++ E IP+ + + L+ F
Sbjct: 206 ALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAASVLKSFL 265
Query: 326 PQGNFRRIDNLKPWGLYQV 344
+ R+ L G +
Sbjct: 266 NKDPKERLGCLPQTGFADI 284
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 30 YHVIRKLGWGHFSTV----WLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
+ I+ LG G F TV W+ + K VA+K ++ + + A EI+ ++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEIL------DEA 72
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
V +S N V RLL + + ++ ++M + L R I Q +
Sbjct: 73 YVMASVDNPH----VCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNIGSQYL 123
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILM-------CVDYDKVRRMARDATKHHKIG 198
Q+ +G+NYL + R++H D+ N+L+ D+ + + + + ++H G
Sbjct: 124 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 182
Query: 199 MKLP---MSLDSTM 209
K+P M+L+S +
Sbjct: 183 GKVPIKWMALESIL 196
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 41/149 (27%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
++V+ + ++ L++LH+ II+ D+KPENIL+ D H K
Sbjct: 126 EDVKFYLAELALALDHLHS-LGIIYRDLKPENILL------------DEEGHIK------ 166
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
++DF L + E D K C ++ A E+ R+ G+
Sbjct: 167 ------LTDFGL---SKESIDHEKKAYSF---CGTVEYMAPEVVNRR----------GHT 204
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKE 291
+AD WS + FE+ TG F K KE
Sbjct: 205 QSADWWSFGVLMFEMLTGTLPFQGKDRKE 233
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 112/309 (36%), Gaps = 67/309 (21%)
Query: 13 RPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR 72
RP ++I D F H + LG G F V+L+ + F A+K +K D V D
Sbjct: 8 RPSLQIKLKIED---FELH--KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV 62
Query: 73 DEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLI 132
+ ++ K V + H L + ++ V E + L
Sbjct: 63 ECTMVEKRVLSLAWEHP-------------FLTHMFCTFQTKENLFFVMEYLNGGDLMYH 109
Query: 133 ARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDAT 192
+S +K + +++ GL +LH++ I++ D+K +NIL+ D
Sbjct: 110 IQSCHK-FDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILL------------DKD 155
Query: 193 KHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRS 252
H KI M ++ + D A C D+ A EI
Sbjct: 156 GHIKIA-DFGMCKENMLGD-----------------AKTNEFCGTPDYIAPEI------- 190
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312
L+G Y + D WS + +E+ G F + +D++ L H + + P
Sbjct: 191 ---LLGQKYNHSVDWWSFGVLLYEMLIGQSPF-------HGQDEEELFHSIRMDNPFYPR 240
Query: 313 VLSQGKKTL 321
L + K L
Sbjct: 241 WLEKEAKDL 249
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 133/368 (36%), Gaps = 112/368 (30%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + + LG G V L+++ + VA++I+ + +AR+
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSARE--------------AD 196
Query: 90 SAYNTQASEKVIRLLND---FKIYSR-NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQN 144
A N + ++++ LN KI + + +V E+M G L + + K +
Sbjct: 197 PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEAT 254
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
+ Q+L + YLH IIH D+KPEN+L+
Sbjct: 255 CKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLL--------------------------- 286
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG---A 259
+++ D +KI D G++ + + T Y + EVL+ A
Sbjct: 287 -------------SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 333
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
GY A D WS + F +G Y +H + K+ ++ GK
Sbjct: 334 GYNRAVDCWSLGVILFICLSG-----------YPPFSEHRTQVS------LKDQITSGK- 375
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAA 378
Y + E + AE S+ A D + +L V+ K R +
Sbjct: 376 ----------------------YNFIPEVW----AEVSEKALDLVKKLLVVDPKARFTTE 409
Query: 379 DCLRHPWL 386
+ LRHPWL
Sbjct: 410 EALRHPWL 417
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 41/149 (27%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
++V+ + ++ L++LH+ II+ D+KPENIL+ D H K
Sbjct: 127 EDVKFYLAELALALDHLHS-LGIIYRDLKPENILL------------DEEGHIK------ 167
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
++DF L + E D K C ++ A E+ R+ G+
Sbjct: 168 ------LTDFGL---SKESIDHEKKAYSF---CGTVEYMAPEVVNRR----------GHT 205
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKE 291
+AD WS + FE+ TG F K KE
Sbjct: 206 QSADWWSFGVLMFEMLTGTLPFQGKDRKE 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 22/148 (14%)
Query: 150 KQVLEGLNY-LHTQCRIIHTDIKPENILMCVDY-------DKVRRMARDATKHHK----- 196
K++L+ +N+ T+ D N+ M ++Y +RR+ R H +
Sbjct: 93 KRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 197 --IGMKLPMSLDSTMSDFSLLDPANEVYDIS--VKIADLGNACWIDDHFADEIQTRQYRS 252
+ + SLD D L P N + D +K+ D G A + T +Y +
Sbjct: 151 IVLTFEYLHSLDLIYRD---LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLA 207
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATG 280
E+++ GY A D W+ + +E+A G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 125/364 (34%), Gaps = 111/364 (30%)
Query: 30 YHVIRKLGWGHFSTVW-LSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y + +LG G F V ++ F A ++ + +T R EI + + +
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT--- 215
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRT 147
++ L + F+ + + M++E M G L +A K + V
Sbjct: 216 -----------LVNLHDAFE----DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE- 259
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++QV +GL ++H + +H D+KPENI+ S +
Sbjct: 260 YMRQVCKGLCHMH-ENNYVHLDLKPENIMFTTK----------------------RSNEL 296
Query: 208 TMSDFSL---LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
+ DF L LDP SVK+ T ++ + EV G G
Sbjct: 297 KLIDFGLTAHLDPKQ-----SVKVT---------------TGTAEFAAPEVAEGKPVGYY 336
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
D+WS +++ L +G P G+ DD+ L ++ K+ +
Sbjct: 337 TDMWSVGVLSYILLSG---LSPFGGE---NDDETLRNV----------------KSCDWN 374
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
F I + D DF+ +L + R + L HP
Sbjct: 375 MDDSAFSGI----------------------SEDGKDFIRKLLLADPNTRMTIHQALEHP 412
Query: 385 WLNP 388
WL P
Sbjct: 413 WLTP 416
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 41/149 (27%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
++V+ + ++ L++LH+ II+ D+KPENIL+ D H K
Sbjct: 126 EDVKFYLAELALALDHLHS-LGIIYRDLKPENILL------------DEEGHIK------ 166
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
++DF L + E D K C ++ A E+ R+ G+
Sbjct: 167 ------LTDFGL---SKESIDHEKKAYSF---CGTVEYMAPEVVNRR----------GHT 204
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKE 291
+AD WS + FE+ TG F K KE
Sbjct: 205 QSADWWSFGVLMFEMLTGTLPFQGKDRKE 233
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 148/371 (39%), Gaps = 89/371 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V+RK+G G +S V+ ++ + + +I+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNN---------------EKCIIKILKPVKKKKIKREIK 77
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N +++LL+ + ++ ++FE + +++ Y + ++R I
Sbjct: 78 ILQNLMGGPNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI 131
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H+Q I+H D+KP N+++ + K+R +D +
Sbjct: 132 YELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLR------------------LIDWGL 172
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F P E +V++A +R ++ E+L+ Y + D+W
Sbjct: 173 AEF--YHPGKEY---NVRVA-----------------SRYFKGPELLVDLQDYDYSLDMW 210
Query: 269 STACM-AFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEV-LSQGKKTLRYFT 325
S CM A + + F Y D+ D L I +++G V L++ + L
Sbjct: 211 SLGCMFAGMIFRKEPFF-------YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL---D 260
Query: 326 PQ-----GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
PQ G R KPW L + + H EA DF D LL H + R +A +
Sbjct: 261 PQLEALVGRHSR----KPW-LKFMNADNQHLVSPEAIDFLDKLLRYDH---QERLTALEA 312
Query: 381 LRHPWLNPRRS 391
+ HP+ R+
Sbjct: 313 MTHPYFQQVRA 323
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E++I GY A D W+ + +E+
Sbjct: 172 LIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 148/371 (39%), Gaps = 89/371 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V+RK+G G +S V+ ++ + + +I+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNN---------------EKCIIKILKPVKKKKIKREIK 77
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N +++LL+ + ++ ++FE + +++ Y + ++R I
Sbjct: 78 ILQNLXGGPNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI 131
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H+Q I+H D+KP N+++ + K+R +D +
Sbjct: 132 YELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLR------------------LIDWGL 172
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F P E +V++A +R ++ E+L+ Y + D+W
Sbjct: 173 AEF--YHPGKEY---NVRVA-----------------SRYFKGPELLVDLQDYDYSLDMW 210
Query: 269 STACM-AFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEV-LSQGKKTLRYFT 325
S CM A + + F Y D+ D L I +++G V L++ + L
Sbjct: 211 SLGCMFAGMIFRKEPFF-------YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL---D 260
Query: 326 PQ-----GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
PQ G R KPW L + + H EA DF D LL H + R +A +
Sbjct: 261 PQLEALVGRHSR----KPW-LKFMNADNQHLVSPEAIDFLDKLLRYDH---QERLTALEA 312
Query: 381 LRHPWLNPRRS 391
+ HP+ R+
Sbjct: 313 MTHPYFQQVRA 323
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 57/257 (22%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++R +G G ++ V L + A+K+VK + V D D + K V +++ H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
++ L + F+ SR + V E V G +L+ + R + + ++ R
Sbjct: 71 F---------LVGLHSCFQTESR----LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFY 115
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
++ LNYLH + II+ D+K +N+L+ D+ H K
Sbjct: 116 SAEISLALNYLHERG-IIYRDLKLDNVLL------------DSEGHIK------------ 150
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
++D+ + D + T Y + E+L G YG + D W
Sbjct: 151 LTDYGMCKEGLRPGDTTSXFCG----------------TPNYIAPEILRGEDYGFSVDWW 194
Query: 269 STACMAFELATGDYLFD 285
+ + FE+ G FD
Sbjct: 195 ALGVLMFEMMAGRSPFD 211
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 148/371 (39%), Gaps = 89/371 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V+RK+G G +S V+ ++ + + +I+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNN---------------EKCIIKILKPVKKKKIKREIK 77
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N +++LL+ + ++ ++FE + +++ Y + ++R I
Sbjct: 78 ILQNLXGGPNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI 131
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H+Q I+H D+KP N+++ + K+R +D +
Sbjct: 132 YELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLR------------------LIDWGL 172
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F P E +V++A +R ++ E+L+ Y + D+W
Sbjct: 173 AEF--YHPGKEY---NVRVA-----------------SRYFKGPELLVDLQDYDYSLDMW 210
Query: 269 STACM-AFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEV-LSQGKKTLRYFT 325
S CM A + + F Y D+ D L I +++G V L++ + L
Sbjct: 211 SLGCMFAGMIFRKEPFF-------YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL---D 260
Query: 326 PQ-----GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
PQ G R KPW L + + H EA DF D LL H + R +A +
Sbjct: 261 PQLEALVGRHSR----KPW-LKFMNADNQHLVSPEAIDFLDKLLRYDH---QERLTALEA 312
Query: 381 LRHPWLNPRRS 391
+ HP+ R+
Sbjct: 313 MTHPYFQQVRA 323
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 25 LFNFRYHVIRKLGWGHFSTV----WLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA 80
L + I+ LG G F TV W+ + K VA+K ++ + + A EI+
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEIL---- 67
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI 140
++ V +S N V RLL + + ++ ++M + L R I
Sbjct: 68 --DEAYVMASVDNPH----VCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNI 116
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM-------CVDYDKVRRMARDATK 193
Q + Q+ +G+NYL + R++H D+ N+L+ D+ + + + + +
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
Query: 194 HHKIGMKLP---MSLDSTM 209
+H G K+P M+L+S +
Sbjct: 176 YHAEGGKVPIKWMALESIL 194
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 25 LFNFRYHVIRKLGWGHFSTV----WLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA 80
L + I+ LG G F TV W+ + K VA+K ++ + + A EI+
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEIL---- 72
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI 140
++ V +S N V RLL + + ++ ++M + L R I
Sbjct: 73 --DEAYVMASVDNPH----VCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNI 121
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM-------CVDYDKVRRMARDATK 193
Q + Q+ +G+NYL + R++H D+ N+L+ D+ + + + + +
Sbjct: 122 GSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 180
Query: 194 HHKIGMKLP---MSLDSTM 209
+H G K+P M+L+S +
Sbjct: 181 YHAEGGKVPIKWMALESIL 199
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 100 VIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYL 159
+++LL+ F Y N I + F G + + + + ++ + KQ L+ LNYL
Sbjct: 69 IVKLLDAF--YYENNLWILIEFCAGGA--VDAVMLELERPLTESQIQVVCKQTLDALNYL 124
Query: 160 HTQCRIIHTDIKPENILMCVDYD 182
H +IIH D+K NIL +D D
Sbjct: 125 HDN-KIIHRDLKAGNILFTLDGD 146
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 56/255 (21%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 172
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 173 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 203
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVL 314
+ Y + D+WS CM LA+ + +P + D+ D L I +++G +++
Sbjct: 204 VDYQMYDYSLDMWSLGCM---LASMIFRKEPFF---HGHDNYDQLVRIAKVLG--TEDLY 255
Query: 315 SQGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
K P+ N + K W + V +E H EA DF D LL H +
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QS 311
Query: 374 RASAADCLRHPWLNP 388
R +A + + HP+ P
Sbjct: 312 RLTAREAMEHPYFYP 326
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 148/371 (39%), Gaps = 89/371 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V+RK+G G +S V+ ++ + + +I+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNN---------------EKCIIKILKPVKKKKIKREIK 77
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N +++LL+ + ++ ++FE + +++ Y + ++R I
Sbjct: 78 ILQNLXGGPNIVKLLDIVR--DQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI 131
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H+Q I+H D+KP N+++ + K+R +D +
Sbjct: 132 YELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLR------------------LIDWGL 172
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F P E +V++A +R ++ E+L+ Y + D+W
Sbjct: 173 AEF--YHPGKEY---NVRVA-----------------SRYFKGPELLVDLQDYDYSLDMW 210
Query: 269 STACM-AFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEV-LSQGKKTLRYFT 325
S CM A + + F Y D+ D L I +++G V L++ + L
Sbjct: 211 SLGCMFAGMIFRKEPFF-------YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL---D 260
Query: 326 PQ-----GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
PQ G R KPW L + + H EA DF D LL H + R +A +
Sbjct: 261 PQLEALVGRHSR----KPW-LKFMNADNQHLVSPEAIDFLDKLLRYDH---QERLTALEA 312
Query: 381 LRHPWLNPRRS 391
+ HP+ R+
Sbjct: 313 MTHPYFQQVRA 323
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 25 LFNFRYHVIRKLGWGHFSTV----WLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA 80
L + I+ LG G F TV W+ + K VA+K ++ + + A EI+
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEIL---- 65
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI 140
++ V +S N V RLL + + ++ ++M + L R I
Sbjct: 66 --DEAYVMASVDNPH----VCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNI 114
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM-------CVDYDKVRRMARDATK 193
Q + Q+ +G+NYL + R++H D+ N+L+ D+ + + + + +
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 173
Query: 194 HHKIGMKLP---MSLDSTM 209
+H G K+P M+L+S +
Sbjct: 174 YHAEGGKVPIKWMALESIL 192
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 148/371 (39%), Gaps = 89/371 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V+RK+G G +S V+ ++ + + +I+ +
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNN---------------EKCIIKILKPVKKKKIKREIK 78
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N +++LL+ + ++ ++FE + +++ Y + ++R I
Sbjct: 79 ILQNLXGGPNIVKLLDIVR--DQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI 132
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H+Q I+H D+KP N+++ + K+R +D +
Sbjct: 133 YELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLR------------------LIDWGL 173
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F P E +V++A +R ++ E+L+ Y + D+W
Sbjct: 174 AEF--YHPGKEY---NVRVA-----------------SRYFKGPELLVDLQDYDYSLDMW 211
Query: 269 STACM-AFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEV-LSQGKKTLRYFT 325
S CM A + + F Y D+ D L I +++G V L++ + L
Sbjct: 212 SLGCMFAGMIFRKEPFF-------YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL---D 261
Query: 326 PQ-----GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
PQ G R KPW L + + H EA DF D LL H + R +A +
Sbjct: 262 PQLEALVGRHSR----KPW-LKFMNADNQHLVSPEAIDFLDKLLRYDH---QERLTALEA 313
Query: 381 LRHPWLNPRRS 391
+ HP+ R+
Sbjct: 314 MTHPYFQQVRA 324
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 106/287 (36%), Gaps = 87/287 (30%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-------KSDQVYADTARDEIVLLKAVG 82
Y V++ +G G F V L + A+K++ +SD + RD +
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 133
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIH 141
S V++L F+ + ++ MV E M G +L+ L++ D +
Sbjct: 134 --------------SPWVVQLFCAFQ----DDKYLYMVMEYMPGGDLVNLMSNYD---VP 172
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ + +V+ L+ +H+ +IH D+KP+N+L+ KH +
Sbjct: 173 EKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLL--------------DKHGHL---- 213
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLI 257
K+AD G +D+ H + T Y S EVL
Sbjct: 214 -------------------------KLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 258 GAG----YGPAADIWSTACMAFELATGDYLF--DPKAGKEYSRDDDH 298
G YG D WS FE+ GD F D G YS+ DH
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT-YSKIMDH 294
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +K+ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 57/257 (22%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++R +G G ++ V L + A+K+VK + V D D + K V +++ H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
++ L + F+ SR + V E V G +L+ + R + + ++ R
Sbjct: 67 F---------LVGLHSCFQTESR----LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFY 111
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
++ LNYLH + II+ D+K +N+L+ D+ H K
Sbjct: 112 SAEISLALNYLHERG-IIYRDLKLDNVLL------------DSEGHIK------------ 146
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
++D+ + D + T Y + E+L G YG + D W
Sbjct: 147 LTDYGMCKEGLRPGDTTSXFCG----------------TPNYIAPEILRGEDYGFSVDWW 190
Query: 269 STACMAFELATGDYLFD 285
+ + FE+ G FD
Sbjct: 191 ALGVLMFEMMAGRSPFD 207
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 172
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +K+ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 278 ATG 280
A G
Sbjct: 233 AAG 235
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
Query: 29 RYHVIRKLGWGHFSTV----WLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84
+ I+ LG G F TV W+ + K VA+K ++ + + A EI+ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEIL------DE 64
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
+ V +S N V RLL + + ++ ++M + L R I Q
Sbjct: 65 AYVMASVDNPH----VCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQY 115
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM-------CVDYDKVRRMARDATKHHKI 197
+ Q+ EG+NYL + R++H D+ N+L+ D+ + + + ++H
Sbjct: 116 LLNWCVQIAEGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
Query: 198 GMKLP---MSLDSTM 209
G K+P M+L+S +
Sbjct: 175 GGKVPIKWMALESIL 189
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R A H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDY-------DKVRRMARDATKHHK------ 196
K++L+ +N+ ++ ++ N+ M ++Y +RR+ R + H +
Sbjct: 92 KRILQAVNFPFL-VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 197 -IGMKLPMSLDSTMSDFSLLDPANEVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSV 253
+ + SLD D L P N + D +++ D G A + T +Y +
Sbjct: 151 VLTFEYLHSLDLIYRD---LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 254 EVLIGAGYGPAADIWSTACMAFELATG 280
E+++ GY A D W+ + +E+A G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDY-------DKVRRMARDATKHHK------ 196
K++L+ +N+ ++ ++ N+ M ++Y +RR+ R + H +
Sbjct: 92 KRILQAVNFPFL-VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 197 -IGMKLPMSLDSTMSDFSLLDPANEVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSV 253
+ + SLD D L P N + D +++ D G A + T +Y +
Sbjct: 151 VLTFEYLHSLDLIYRD---LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 254 EVLIGAGYGPAADIWSTACMAFELATG 280
E+++ GY A D W+ + +E+A G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDY-------DKVRRMARDATKHHK------ 196
K++L+ +N+ ++ ++ N+ M ++Y +RR+ R + H +
Sbjct: 92 KRILQAVNFPFL-VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 197 -IGMKLPMSLDSTMSDFSLLDPANEVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSV 253
+ + SLD D L P N + D +++ D G A + T +Y +
Sbjct: 151 VLTFEYLHSLDLIYRD---LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 254 EVLIGAGYGPAADIWSTACMAFELATG 280
E+++ GY A D W+ + +E+A G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +K+ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++++ M R G +G L +F ++R +G G ++ V L + A+++VK
Sbjct: 31 EEEKEAMNTRESGKASSSLG-LQDF--DLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKK 87
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE- 122
+ V D D + K V +++ H ++ L + F+ SR + V E
Sbjct: 88 ELVNDDEDIDWVQTEKHVFEQASNHPF---------LVGLHSCFQTESR----LFFVIEY 134
Query: 123 VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182
V G +L+ + R + + ++ R ++ LNYLH + II+ D+K +N+L+
Sbjct: 135 VNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLL----- 186
Query: 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA 242
D+ H K ++D+ + D +
Sbjct: 187 -------DSEGHIK------------LTDYGMCKEGLRPGDTTSTFCG------------ 215
Query: 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFD 285
T Y + E+L G YG + D W+ + FE+ G FD
Sbjct: 216 ----TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 215 LDPANEVYDIS--VKIADLGNAC-WIDDHFADEIQTRQYRSVEVL-IGAGYGPAADIWST 270
L PAN + D V+I+DLG AC + + T Y + EVL G Y +AD +S
Sbjct: 318 LKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 271 ACMAFELATGDYLFDP-KAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
CM F+L G F K ++ D L VEL E+ S
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 215 LDPANEVYDIS--VKIADLGNAC-WIDDHFADEIQTRQYRSVEVL-IGAGYGPAADIWST 270
L PAN + D V+I+DLG AC + + T Y + EVL G Y +AD +S
Sbjct: 318 LKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 271 ACMAFELATGDYLFDP-KAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
CM F+L G F K ++ D L VEL E+ S
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 70/267 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGI 140
SS ++ VIRLL+ F+ R + + ++ +L I ++ +
Sbjct: 65 -------SSGFSG-----VIRLLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGAL 107
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ R+ QVLE + + H ++H DIK ENIL+ ++ +
Sbjct: 108 QEELARSFFWQVLEAVRHCHNXG-VLHRDIKDENILIDLNRGE----------------- 149
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259
+K+ D G+ + D + D TR Y E +
Sbjct: 150 -------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 260 GY-GPAADIWSTACMAFELATGDYLFD 285
Y G +A +WS + +++ GD F+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 56/253 (22%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+L+ ++ K+R
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVLIDHEHRKLR----------- 172
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 173 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 203
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVL 314
+ Y + D+WS CM LA+ + +P + D+ D L I +++G +++
Sbjct: 204 VDYQMYDYSLDMWSLGCM---LASMIFRKEPFF---HGHDNYDQLVRIAKVLG--TEDLY 255
Query: 315 SQGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
K P+ N + K W + V +E H EA DF D LL H +
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QS 311
Query: 374 RASAADCLRHPWL 386
R +A + + HP+
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 215 LDPANEVYDIS--VKIADLGNAC-WIDDHFADEIQTRQYRSVEVL-IGAGYGPAADIWST 270
L PAN + D V+I+DLG AC + + T Y + EVL G Y +AD +S
Sbjct: 318 LKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 271 ACMAFELATGDYLFDP-KAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
CM F+L G F K ++ D L VEL E+ S
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 77/261 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ I+ LG G F V L ++ A+KI+ + ++V LK + N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD---------KQKVVKLKQIEHTLN-- 90
Query: 89 SSAYNTQASEKVIRLLN-------DFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKG 139
+++++ +N +F + ++ M + G ++ LR I R
Sbjct: 91 --------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----- 137
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ R Q++ YLH+ +I+ D+KPEN+++ D +
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLMI------------DQQGY----- 179
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
+K+ D G A + T +Y + E+++
Sbjct: 180 --------------------------IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 260 GYGPAADIWSTACMAFELATG 280
GY A D W+ + +E+A G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 215 LDPANEVYDIS--VKIADLGNAC-WIDDHFADEIQTRQYRSVEVL-IGAGYGPAADIWST 270
L PAN + D V+I+DLG AC + + T Y + EVL G Y +AD +S
Sbjct: 317 LKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 376
Query: 271 ACMAFELATGDYLFDP-KAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
CM F+L G F K ++ D L VEL E+ S
Sbjct: 377 GCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 422
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 77/261 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ I+ LG G F V L ++ A+KI+ + ++V LK + N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD---------KQKVVKLKQIEHTLN-- 90
Query: 89 SSAYNTQASEKVIRLLN-----DFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKG 139
+++++ +N + ++ +++ MV E + ++ LR I R
Sbjct: 91 --------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----- 137
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ R Q++ YLH+ +I+ D+KPEN+L+ D +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLI------------DQQGY----- 179
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
+++ D G A + T +Y + E+++
Sbjct: 180 --------------------------IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 260 GYGPAADIWSTACMAFELATG 280
GY A D W+ + +E+A G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 148/371 (39%), Gaps = 89/371 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V+RK+G G +S V+ ++ + + +I+ +
Sbjct: 35 YEVVRKVGRGKYSEVFEGINVNNN---------------EKCIIKILKPVKKKKIKREIK 79
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N +++LL+ + ++ ++FE + +++ Y + ++R I
Sbjct: 80 ILQNLCGGPNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI 133
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H+Q I+H D+KP N+++ + K+R +D +
Sbjct: 134 YELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLR------------------LIDWGL 174
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F P E +V++A +R ++ E+L+ Y + D+W
Sbjct: 175 AEF--YHPGKEY---NVRVA-----------------SRYFKGPELLVDLQDYDYSLDMW 212
Query: 269 STACM-AFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEV-LSQGKKTLRYFT 325
S CM A + + F Y D+ D L I +++G V L++ + L
Sbjct: 213 SLGCMFAGMIFRKEPFF-------YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL---D 262
Query: 326 PQ-----GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
PQ G R KPW L + + H EA DF D LL H + R +A +
Sbjct: 263 PQLEALVGRHSR----KPW-LKFMNADNQHLVSPEAIDFLDKLLRYDH---QERLTALEA 314
Query: 381 LRHPWLNPRRS 391
+ HP+ R+
Sbjct: 315 MTHPYFQQVRA 325
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 106/287 (36%), Gaps = 69/287 (24%)
Query: 5 QQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD 64
Q+ S+ ++R V GD ++ + I K+G G V ++ VA+K K D
Sbjct: 129 QRVSHEQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCIATVRSSGKLVAVK--KMD 185
Query: 65 QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM 124
R E++ + V + H E V+ + N + + G + +V E +
Sbjct: 186 --LRKQQRRELLFNEVVIMRDYQH---------ENVVEMYNSYLV----GDELWVVMEFL 230
Query: 125 GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
L I + ++ + + + VL+ L+ LH Q +IH DIK ++IL+
Sbjct: 231 EGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLT------ 281
Query: 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE 244
+D VK++D G +
Sbjct: 282 -------------------------------------HDGRVKLSDFGFCAQVSKEVPRR 304
Query: 245 ---IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGD--YLFDP 286
+ T + + E++ YGP DIWS M E+ G+ Y +P
Sbjct: 305 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 351
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 101 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 157
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 158 LLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 217
Query: 278 ATG 280
A G
Sbjct: 218 AAG 220
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 148/371 (39%), Gaps = 89/371 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V+RK+G G +S V+ ++ + + +I+ +
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNN---------------EKCIIKILKPVKKKKIKREIK 78
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N +++LL+ + ++ ++FE + +++ Y + ++R I
Sbjct: 79 ILQNLCGGPNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI 132
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H+Q I+H D+KP N+++ + K+R +D +
Sbjct: 133 YELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLR------------------LIDWGL 173
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F P E +V++A +R ++ E+L+ Y + D+W
Sbjct: 174 AEF--YHPGKEY---NVRVA-----------------SRYFKGPELLVDLQDYDYSLDMW 211
Query: 269 STACM-AFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEV-LSQGKKTLRYFT 325
S CM A + + F Y D+ D L I +++G V L++ + L
Sbjct: 212 SLGCMFAGMIFRKEPFF-------YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL---D 261
Query: 326 PQ-----GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
PQ G R KPW L + + H EA DF D LL H + R +A +
Sbjct: 262 PQLEALVGRHSR----KPW-LKFMNADNQHLVSPEAIDFLDKLLRYDH---QERLTALEA 313
Query: 381 LRHPWLNPRRS 391
+ HP+ R+
Sbjct: 314 MTHPYFQQVRA 324
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 26 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 84
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 85 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKL------------TINKLLDMAAQ 126
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 127 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 183
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 119 MVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178
+ E+ L + + D+ + ++ + T+++Q GL +LH+ I+H D+KP NIL+
Sbjct: 95 IAIELCAATLQEYVEQKDFAHLGLEPI-TLLQQTTSGLAHLHS-LNIVHRDLKPHNILIS 152
Query: 179 VD--YDKVRRMARD 190
+ + K++ M D
Sbjct: 153 MPNAHGKIKAMISD 166
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 106/287 (36%), Gaps = 69/287 (24%)
Query: 5 QQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD 64
Q+ S+ ++R V GD ++ + I K+G G V ++ VA+K K D
Sbjct: 52 QRVSHEQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCIATVRSSGKLVAVK--KMD 108
Query: 65 QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM 124
R E++ + V + H E V+ + N + + G + +V E +
Sbjct: 109 --LRKQQRRELLFNEVVIMRDYQH---------ENVVEMYNSYLV----GDELWVVMEFL 153
Query: 125 GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
L I + ++ + + + VL+ L+ LH Q +IH DIK ++IL+
Sbjct: 154 EGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLT------ 204
Query: 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE 244
+D VK++D G +
Sbjct: 205 -------------------------------------HDGRVKLSDFGFCAQVSKEVPRR 227
Query: 245 ---IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGD--YLFDP 286
+ T + + E++ YGP DIWS M E+ G+ Y +P
Sbjct: 228 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 274
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 98 EKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLN 157
+ VI+L++ +Y+ + MV E + ++ K + Q+++GL
Sbjct: 66 KNVIQLVD--VLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLE 123
Query: 158 YLHTQCRIIHTDIKPENILM 177
YLH+Q I+H DIKP N+L+
Sbjct: 124 YLHSQ-GIVHKDIKPGNLLL 142
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 148/371 (39%), Gaps = 89/371 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V+RK+G G +S V+ ++ + + +I+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNN---------------EKCIIKILKPVKKKKIKREIK 77
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N +++LL+ + ++ ++FE + +++ Y + ++R I
Sbjct: 78 ILQNLCGGPNIVKLLDIVR--DQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI 131
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H+Q I+H D+KP N+++ + K+R +D +
Sbjct: 132 YELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLR------------------LIDWGL 172
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F P E +V++A +R ++ E+L+ Y + D+W
Sbjct: 173 AEF--YHPGKEY---NVRVA-----------------SRYFKGPELLVDLQDYDYSLDMW 210
Query: 269 STACM-AFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEV-LSQGKKTLRYFT 325
S CM A + + F Y D+ D L I +++G V L++ + L
Sbjct: 211 SLGCMFAGMIFRKEPFF-------YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL---D 260
Query: 326 PQ-----GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
PQ G R KPW L + + H EA DF D LL H + R +A +
Sbjct: 261 PQLEALVGRHSR----KPW-LKFMNADNQHLVSPEAIDFLDKLLRYDH---QERLTALEA 312
Query: 381 LRHPWLNPRRS 391
+ HP+ R+
Sbjct: 313 MTHPYFQQVRA 323
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 25 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 83
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 84 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKLT------------INKLLDMAAQ 125
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 126 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 182
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 46/271 (16%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVG 82
+ +H + K+G G F +V+ D A+K K + V A E+ +G
Sbjct: 5 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 64
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ S+V ++ A + + + N++ I + +M Y +K +
Sbjct: 65 QHSHV-VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY----------FKEAEL 113
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
++ ++ QV GL Y+H+ ++H DIKP NI + + +
Sbjct: 114 KD---LLLQVGRGLRYIHSMS-LVHMDIKPSNIFIS-----------------RTSIPNA 152
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI-GAGY 261
S + D++ +N+V KI DLG+ I +E +R + + EVL +
Sbjct: 153 ASEEGDEDDWA----SNKVM---FKIGDLGHVTRISSPQVEEGDSR-FLANEVLQENYTH 204
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEY 292
P ADI++ A A + L P+ G ++
Sbjct: 205 LPKADIFALALTVVXAAGAEPL--PRNGDQW 233
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 147/371 (39%), Gaps = 89/371 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V+RK+G G +S V F + + +++ + +
Sbjct: 33 YEVVRKVGRGKYSEV----------FEGINVNNNEKCIIKILK-----PVKKKKIKREIK 77
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N +++LL+ + ++ ++FE + +++ Y + ++R I
Sbjct: 78 ILQNLCGGPNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI 131
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H+Q I+H D+KP N+++ + K+R +D +
Sbjct: 132 YELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLR------------------LIDWGL 172
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F P E +V++A +R ++ E+L+ Y + D+W
Sbjct: 173 AEF--YHPGKEY---NVRVA-----------------SRYFKGPELLVDLQDYDYSLDMW 210
Query: 269 STACM-AFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEV-LSQGKKTLRYFT 325
S CM A + + F Y D+ D L I +++G V L++ + L
Sbjct: 211 SLGCMFAGMIFRKEPFF-------YGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL---D 260
Query: 326 PQ-----GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
PQ G R KPW L + + H EA DF D LL H + R +A +
Sbjct: 261 PQLEALVGRHSR----KPW-LKFMNADNQHLVSPEAIDFLDKLLRYDH---QERLTALEA 312
Query: 381 LRHPWLNPRRS 391
+ HP+ R+
Sbjct: 313 MTHPYFQQVRA 323
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 146/371 (39%), Gaps = 89/371 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V+RK+G G +S V+ ++ + + +I+ +
Sbjct: 54 YEVVRKVGRGKYSEVFEGINVNNN---------------EKCIIKILKPVKKKKIKREIK 98
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N +++LL+ + ++ ++FE + +++ Y + ++R I
Sbjct: 99 ILQNLXGGPNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI 152
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++L+ L+Y H+Q I+H D+KP N+++ + K+R +D +
Sbjct: 153 YELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLR------------------LIDWGL 193
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIW 268
++F P E +V++A +R ++ E+L+ Y + D+W
Sbjct: 194 AEF--YHPGKEY---NVRVA-----------------SRYFKGPELLVDLQDYDYSLDMW 231
Query: 269 STACM-AFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVLSQGKKTLRY-FT 325
S CM A + + F Y D+ D L I +++G + L+ R
Sbjct: 232 SLGCMFAGMIFRKEPFF-------YGHDNHDQLVKIAKVLG---TDGLNAYLNKYRIELD 281
Query: 326 PQ-----GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
PQ G R KPW L + + H EA DF D LL H + R +A +
Sbjct: 282 PQLEALVGRHSR----KPW-LKFMNADNQHLVSPEAIDFLDKLLRYDH---QERLTALEA 333
Query: 381 LRHPWLNPRRS 391
+ HP+ R+
Sbjct: 334 MTHPYFQQVRA 344
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ +G G + V+ ++ A+K++ + + EI +LK N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI-- 83
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTI 148
+ Y +K ++D + +V E G ++ LI + + + + I
Sbjct: 84 ATYYGAFIKKNPPGMDD---------QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILM 177
+++L GL++LH Q ++IH DIK +N+L+
Sbjct: 135 CREILRGLSHLH-QHKVIHRDIKGQNVLL 162
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 102/267 (38%), Gaps = 65/267 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA---DTARDEIVLLKAVGRKS 85
+Y ++K+G G F L +D +K + ++ + + +R E+ +L
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL------- 77
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
A+ K ++ + + NG+ ++ G +L + I + KG+ Q
Sbjct: 78 ----------ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQED 125
Query: 146 RTI--IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ + Q+ L ++H + +I+H DIK +NI + +D T
Sbjct: 126 QILDWFVQICLALKHVHDR-KILHRDIKSQNIFL----------TKDGTVQ--------- 165
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP 263
+ DF + N +L AC I T Y S E+ Y
Sbjct: 166 -----LGDFGIARVLNST-------VELARAC---------IGTPYYLSPEICENKPYNN 204
Query: 264 AADIWSTACMAFELATGDYLFDPKAGK 290
+DIW+ C+ +EL T + F+ + K
Sbjct: 205 KSDIWALGCVLYELCTLKHAFEAGSMK 231
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 106/287 (36%), Gaps = 69/287 (24%)
Query: 5 QQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD 64
Q+ S+ ++R V GD ++ + I K+G G V ++ VA+K K D
Sbjct: 7 QRVSHEQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCIATVRSSGKLVAVK--KMD 63
Query: 65 QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM 124
R E++ + V + H E V+ + N + + G + +V E +
Sbjct: 64 --LRKQQRRELLFNEVVIMRDYQH---------ENVVEMYNSYLV----GDELWVVMEFL 108
Query: 125 GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
L I + ++ + + + VL+ L+ LH Q +IH DIK ++IL+
Sbjct: 109 EGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLT------ 159
Query: 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE 244
+D VK++D G +
Sbjct: 160 -------------------------------------HDGRVKLSDFGFCAQVSKEVPRR 182
Query: 245 ---IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGD--YLFDP 286
+ T + + E++ YGP DIWS M E+ G+ Y +P
Sbjct: 183 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 229
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 17 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 76 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKLT------------INKLLDMAAQ 117
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 118 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 106/287 (36%), Gaps = 69/287 (24%)
Query: 5 QQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD 64
Q+ S+ ++R V GD ++ + I K+G G V ++ VA+K K D
Sbjct: 9 QRVSHEQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCIATVRSSGKLVAVK--KMD 65
Query: 65 QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM 124
R E++ + V + H E V+ + N + + G + +V E +
Sbjct: 66 --LRKQQRRELLFNEVVIMRDYQH---------ENVVEMYNSYLV----GDELWVVMEFL 110
Query: 125 GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
L I + ++ + + + VL+ L+ LH Q +IH DIK ++IL+
Sbjct: 111 EGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLT------ 161
Query: 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE 244
+D VK++D G +
Sbjct: 162 -------------------------------------HDGRVKLSDFGFCAQVSKEVPRR 184
Query: 245 ---IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGD--YLFDP 286
+ T + + E++ YGP DIWS M E+ G+ Y +P
Sbjct: 185 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 231
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 23 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 82 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKLT------------INKLLDMAAQ 123
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 124 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 180
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 103/287 (35%), Gaps = 68/287 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD------EIVLLKAVG 82
+YH+ +G G + V ++ + Q + A+KI+ +++ +D E+ L+K +
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL- 85
Query: 83 RKSNVHSSAYNTQASEKVI----------RLLNDFKIYSRNGTHICM--VFEVMGYNLLR 130
N+ + Y E+ I LL+ ++ + T C V +
Sbjct: 86 HHPNI-ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPE 144
Query: 131 LIARSDYKGIH--------IQN---VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179
+ IH +Q + I++Q+ L+YLH Q I H DIKPEN L
Sbjct: 145 CNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ-GICHRDIKPENFLFST 203
Query: 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD 239
+ S + + DF L + E Y L N +
Sbjct: 204 N----------------------KSFEIKLVDFGL---SKEFY-------KLNNGEYYG- 230
Query: 240 HFADEIQTRQYRSVEVL--IGAGYGPAADIWSTACMAFELATGDYLF 284
+ T + + EVL YGP D WS + L G F
Sbjct: 231 -MTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 49/184 (26%)
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
IC+VFE M + L R+ + + + V EG+ YL C +IH D+ N L
Sbjct: 80 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCL 138
Query: 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW 236
+ N+V +K++D G +
Sbjct: 139 V---------------------------------------GENQV----IKVSDFGMTRF 155
Query: 237 I-DDHFADEIQTR---QYRSVEVLIGAGYGPAADIWSTACMAFEL-ATGDYLFDPKAGKE 291
+ DD + T+ ++ S EV + Y +D+WS + +E+ + G ++ ++ E
Sbjct: 156 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215
Query: 292 YSRD 295
D
Sbjct: 216 VVED 219
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 104/288 (36%), Gaps = 62/288 (21%)
Query: 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93
+ LG G F V+L+ + F A+K +K D V D + ++ K V + H
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP---- 78
Query: 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVL 153
L + ++ V E + L +S +K + +++
Sbjct: 79 ---------FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEII 128
Query: 154 EGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFS 213
GL +LH++ I++ D+K +NIL+ D H KI M ++ + D
Sbjct: 129 LGLQFLHSKG-IVYRDLKLDNILL------------DKDGHIKIA-DFGMCKENMLGD-- 172
Query: 214 LLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACM 273
A C D+ A EI L+G Y + D WS +
Sbjct: 173 ---------------AKTNXFCGTPDYIAPEI----------LLGQKYNHSVDWWSFGVL 207
Query: 274 AFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
+E+ G F + +D++ L H + + P L + K L
Sbjct: 208 LYEMLIGQSPF-------HGQDEEELFHSIRMDNPFYPRWLEKEAKDL 248
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 164
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 165 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 278 ATG 280
A G
Sbjct: 225 AAG 227
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 77/261 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ I+ LG G F V L ++ A+KI+ + ++V LK + N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD---------KQKVVKLKQIEHTLN-- 91
Query: 89 SSAYNTQASEKVIRLLN-----DFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKG 139
+++++ +N + ++ +++ MV E + ++ LR I R
Sbjct: 92 --------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----- 138
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ R Q++ YLH+ +I+ D+KPEN+L+ D +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLI------------DQQGY----- 180
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
+++ D G A + T +Y + E+++
Sbjct: 181 --------------------------IQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSK 214
Query: 260 GYGPAADIWSTACMAFELATG 280
GY A D W+ + +E+A G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 49/184 (26%)
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
IC+VFE M + L R+ + + + V EG+ YL C +IH D+ N L
Sbjct: 75 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCL 133
Query: 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW 236
+ N+V +K++D G +
Sbjct: 134 V---------------------------------------GENQV----IKVSDFGMTRF 150
Query: 237 I-DDHFADEIQTR---QYRSVEVLIGAGYGPAADIWSTACMAFEL-ATGDYLFDPKAGKE 291
+ DD + T+ ++ S EV + Y +D+WS + +E+ + G ++ ++ E
Sbjct: 151 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210
Query: 292 YSRD 295
D
Sbjct: 211 VVED 214
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDY-------DKVRRMARDATKHHK------ 196
K++L+ +N+ ++ + N+ M ++Y +RR+ R + H +
Sbjct: 92 KRILQAVNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 197 -IGMKLPMSLDSTMSDFSLLDPANEVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSV 253
+ + SLD D L P N + D +++ D G A + T +Y +
Sbjct: 151 VLTFEYLHSLDLIYRD---LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAP 207
Query: 254 EVLIGAGYGPAADIWSTACMAFELATG 280
E+++ GY A D W+ + +E+A G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 54/252 (21%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 172
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 173 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 203
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ Y + D+WS CM + +F + + D L I +++G +++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASM-----IFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYD 256
Query: 316 QGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
K P+ N + K W + V +E H EA DF D LL H + R
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QSR 312
Query: 375 ASAADCLRHPWL 386
+A + + HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 102 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 158
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 159 LLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 218
Query: 278 ATG 280
A G
Sbjct: 219 AAG 221
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 56/253 (22%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 172
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 173 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 203
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVL 314
+ Y + D+WS CM LA+ + +P + D+ D L I +++G +++
Sbjct: 204 VDYQMYDYSLDMWSLGCM---LASMIFRKEPFF---HGHDNYDQLVRIAKVLG--TEDLY 255
Query: 315 SQGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
K P+ N + K W + V +E H EA DF D LL H +
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QS 311
Query: 374 RASAADCLRHPWL 386
R +A + + HP+
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVG 82
+ +H + K+G G F +V+ D A+K K + V A E+ +G
Sbjct: 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 68
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ S+V ++ A + + + N++ I + +M Y +K +
Sbjct: 69 QHSHV-VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY----------FKEAEL 117
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
++ ++ QV GL Y+H+ ++H DIKP NI +
Sbjct: 118 KD---LLLQVGRGLRYIHSMS-LVHMDIKPSNIFI 148
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 49/184 (26%)
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
IC+VFE M + L R+ + + + V EG+ YL C +IH D+ N L
Sbjct: 77 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCL 135
Query: 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW 236
+ N+V +K++D G +
Sbjct: 136 V---------------------------------------GENQV----IKVSDFGMTRF 152
Query: 237 I-DDHFADEIQTR---QYRSVEVLIGAGYGPAADIWSTACMAFEL-ATGDYLFDPKAGKE 291
+ DD + T+ ++ S EV + Y +D+WS + +E+ + G ++ ++ E
Sbjct: 153 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
Query: 292 YSRD 295
D
Sbjct: 213 VVED 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDY-------DKVRRMARDATKHHK------ 196
K++L+ +N+ ++ + N+ M ++Y +RR+ R + H +
Sbjct: 92 KRILQAVNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 197 -IGMKLPMSLDSTMSDFSLLDPANEVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSV 253
+ + SLD D L P N + D +++ D G A + T +Y +
Sbjct: 151 VLTFEYLHSLDLIYRD---LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAP 207
Query: 254 EVLIGAGYGPAADIWSTACMAFELATG 280
E+++ GY A D W+ + +E+A G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 172
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 278 ATG 280
A G
Sbjct: 233 AAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 172
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 278 ATG 280
A G
Sbjct: 233 AAG 235
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 56/253 (22%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 172
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 173 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 203
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVL 314
+ Y + D+WS CM LA+ + +P + D+ D L I +++G +++
Sbjct: 204 VDYQMYDYSLDMWSLGCM---LASMIFRKEPFF---HGHDNYDQLVRIAKVLG--TEDLY 255
Query: 315 SQGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
K P+ N + K W + V +E H EA DF D LL H +
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QS 311
Query: 374 RASAADCLRHPWL 386
R +A + + HP+
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 172
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 278 ATG 280
A G
Sbjct: 233 AAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 172
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 278 ATG 280
A G
Sbjct: 233 AAG 235
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 19 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 77
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 78 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKL------------TINKLLDMAAQ 119
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 120 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 176
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 54/252 (21%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 171
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 172 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 202
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ Y + D+WS CM + +F + + D L I +++G +++
Sbjct: 203 VDYQMYDYSLDMWSLGCMLASM-----IFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYD 255
Query: 316 QGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
K P+ N + K W + V +E H EA DF D LL H + R
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QSR 311
Query: 375 ASAADCLRHPWL 386
+A + + HP+
Sbjct: 312 LTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 54/252 (21%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 172
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 173 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 203
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ Y + D+WS CM + +F + + D L I +++G +++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASM-----IFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYD 256
Query: 316 QGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
K P+ N + K W + V +E H EA DF D LL H + R
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QSR 312
Query: 375 ASAADCLRHPWL 386
+A + + HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 18 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 76
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 77 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKL------------TINKLLDMAAQ 118
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 119 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 175
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 54/252 (21%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 171
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 172 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 202
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ Y + D+WS CM + +F + + D L I +++G +++
Sbjct: 203 VDYQMYDYSLDMWSLGCMLASM-----IFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYD 255
Query: 316 QGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
K P+ N + K W + V +E H EA DF D LL H + R
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QSR 311
Query: 375 ASAADCLRHPWL 386
+A + + HP+
Sbjct: 312 LTAREAMEHPYF 323
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 43/146 (29%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ + T+ VL L+YLH Q +IH DIK ++IL+ D +++
Sbjct: 141 EQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSD-GRIK----------------- 181
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
+SDF A ++ + +G W+ + EV+ YG
Sbjct: 182 ------LSDFGFC--AQVSKEVPKRKXLVGTPYWM--------------APEVISRLPYG 219
Query: 263 PAADIWSTACMAFELATGD--YLFDP 286
DIWS M E+ G+ Y +P
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPYFNEP 245
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 17 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 76 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKL------------TINKLLDMAAQ 117
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 118 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 136 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 192
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 193 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 278 ATG 280
A G
Sbjct: 253 AAG 255
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 54/252 (21%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 123 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 170
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 171 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 201
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ Y + D+WS CM + +F + + D L I +++G +++
Sbjct: 202 VDYQMYDYSLDMWSLGCMLASM-----IFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYD 254
Query: 316 QGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
K P+ N + K W + V +E H EA DF D LL H + R
Sbjct: 255 YIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QSR 310
Query: 375 ASAADCLRHPWL 386
+A + + HP+
Sbjct: 311 LTAREAMEHPYF 322
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 54/252 (21%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 172
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 173 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 203
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ Y + D+WS CM + +F + + D L I +++G +++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASM-----IFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYD 256
Query: 316 QGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
K P+ N + K W + V +E H EA DF D LL H + R
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QSR 312
Query: 375 ASAADCLRHPWL 386
+A + + HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 56/253 (22%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 172
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 173 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 203
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVL 314
+ Y + D+WS CM LA+ + +P + D+ D L I +++G +++
Sbjct: 204 VDYQMYDYSLDMWSLGCM---LASMIFRKEPFF---HGHDNYDQLVRIAKVLG--TEDLY 255
Query: 315 SQGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
K P+ N + K W + V +E H EA DF D LL H +
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QS 311
Query: 374 RASAADCLRHPWL 386
R +A + + HP+
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVG 82
+ +H + K+G G F +V+ D A+K K + V A E+ +G
Sbjct: 7 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ S+V ++ A + + + N++ I + +M Y +K +
Sbjct: 67 QHSHV-VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY----------FKEAEL 115
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
++ ++ QV GL Y+H+ ++H DIKP NI +
Sbjct: 116 KD---LLLQVGRGLRYIHSMS-LVHMDIKPSNIFI 146
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVG 82
+ +H + K+G G F +V+ D A+K K + V A E+ +G
Sbjct: 7 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ S+V ++ A + + + N++ I + +M Y +K +
Sbjct: 67 QHSHV-VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY----------FKEAEL 115
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
++ ++ QV GL Y+H+ ++H DIKP NI +
Sbjct: 116 KD---LLLQVGRGLRYIHSMS-LVHMDIKPSNIFI 146
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 54/252 (21%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 130 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 177
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 178 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 208
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ Y + D+WS CM + +F + + D L I +++G +++
Sbjct: 209 VDYQMYDYSLDMWSLGCMLASM-----IFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYD 261
Query: 316 QGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
K P+ N + K W + V +E H EA DF D LL H + R
Sbjct: 262 YIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QSR 317
Query: 375 ASAADCLRHPWL 386
+A + + HP+
Sbjct: 318 LTAREAMEHPYF 329
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 116 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 172
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 278 ATG 280
A G
Sbjct: 233 AAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 54/252 (21%)
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
Y+ + ++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR----------- 172
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
+D +++F P E +V++A +R ++ E+L
Sbjct: 173 -------LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELL 203
Query: 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ Y + D+WS CM + +F + + D L I +++G +++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASM-----IFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYD 256
Query: 316 QGKKTLRYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
K P+ N + K W + V +E H EA DF D LL H + R
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QSR 312
Query: 375 ASAADCLRHPWL 386
+A + + HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 77/261 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ I+ LG G F V L ++ A+KI+ + ++V LK + N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD---------KQKVVKLKQIEHTLN-- 91
Query: 89 SSAYNTQASEKVIRLLN-----DFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKG 139
+++++ +N + ++ +++ MV E + ++ LR I R
Sbjct: 92 --------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----- 138
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ R Q++ YLH+ +I+ D+KPEN+L+ D +
Sbjct: 139 FXEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLI------------DQQGY----- 180
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
+++ D G A + T +Y + E+++
Sbjct: 181 --------------------------IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 260 GYGPAADIWSTACMAFELATG 280
GY A D W+ + +E+A G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 77/261 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ I+ LG G F V L ++ A+KI+ + ++V LK + N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD---------KQKVVKLKQIEHTLN-- 90
Query: 89 SSAYNTQASEKVIRLLN-----DFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKG 139
+++++ +N + ++ +++ MV E + ++ LR I R
Sbjct: 91 --------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----- 137
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ R Q++ YLH+ +I+ D+KPEN+L+ D +
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLI------------DQQGY----- 179
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
+++ D G A + T +Y + E+++
Sbjct: 180 --------------------------IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 260 GYGPAADIWSTACMAFELATG 280
GY A D W+ + +E+A G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 27 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 85
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 86 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKLT------------INKLLDMAAQ 127
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 128 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 184
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 103/256 (40%), Gaps = 62/256 (24%)
Query: 30 YHVIRKLGWGHFSTVW----LSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
+ ++R LG G + V+ ++ K F A+K++K + + K
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIF-AMKVLKKAMIVRNA-------------KD 64
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
H+ A E + D + G + ++ E + L + + +GI +++
Sbjct: 65 TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDT 122
Query: 146 RTI-IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
+ ++ L +LH Q II+ D+KPENI++ +H+ +KL
Sbjct: 123 ACFYLAEISMALGHLH-QKGIIYRDLKPENIML----------------NHQGHVKL--- 162
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
+DF L + ++D +V G T +Y + E+L+ +G+ A
Sbjct: 163 -----TDFGLCKES--IHDGTVTHTFCG--------------TIEYMAPEILMRSGHNRA 201
Query: 265 ADIWSTACMAFELATG 280
D WS + +++ TG
Sbjct: 202 VDWWSLGALMYDMLTG 217
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 77/261 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ I+ LG G F V L ++ A+KI+ + ++V LK + N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD---------KQKVVKLKQIEHTLN-- 90
Query: 89 SSAYNTQASEKVIRLLN-----DFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKG 139
+++++ +N + ++ +++ MV E + ++ LR I R
Sbjct: 91 --------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----- 137
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ R Q++ YLH+ +I+ D+KPEN+L+ D +
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLI------------DQQGY----- 179
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
+++ D G A + T +Y + E+++
Sbjct: 180 --------------------------IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 260 GYGPAADIWSTACMAFELATG 280
GY A D W+ + +E+A G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 56/246 (22%)
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++R + ++L+ L+Y H+ I+H D+KP N+++ ++ K+R
Sbjct: 132 DIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR------------------ 172
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYG 262
+D +++F P E +V++A +R ++ E+L+ Y
Sbjct: 173 LIDWGLAEF--YHPGQEY---NVRVA-----------------SRYFKGPELLVDYQMYD 210
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVLSQGKKTL 321
+ D+WS CM LA+ + +P + D+ D L I +++G +++ K
Sbjct: 211 YSLDMWSLGCM---LASMIFRKEPFF---HGHDNYDQLVRIAKVLG--TEDLYDYIDKYN 262
Query: 322 RYFTPQGN-FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
P+ N + K W + V +E H EA DF D LL H + R +A +
Sbjct: 263 IELDPRFNDILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDH---QSRLTAREA 318
Query: 381 LRHPWL 386
+ HP+
Sbjct: 319 MEHPYF 324
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 12 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 70
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 71 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKL------------TINKLLDMAAQ 112
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 113 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 169
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 45/207 (21%)
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGT-----HICMVFEVM-GYNLLRLIARSDYKG 139
++ + N + K+ +L I + G ++C+V E G L R+++ K
Sbjct: 45 DISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG---KR 101
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQC--RIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
I + Q+ G+NYLH + IIH D+K NIL + + + +KI
Sbjct: 102 IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL-------ILQKVENGDLSNKI 154
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257
++DF L A E + + K++ G W+ + EV+
Sbjct: 155 ---------LKITDFGL---ARE-WHRTTKMSAAGAYAWM--------------APEVIR 187
Query: 258 GAGYGPAADIWSTACMAFELATGDYLF 284
+ + +D+WS + +EL TG+ F
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 22 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 80
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 81 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKL------------TINKLLDMAAQ 122
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 123 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 179
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R H + + + SLD D L P N
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 164
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 165 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 278 ATG 280
A G
Sbjct: 225 AAG 227
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 23 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 82 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKL------------TINKLLDMAAQ 123
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 124 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 180
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 68/185 (36%), Gaps = 53/185 (28%)
Query: 100 VIRLLNDFKIYSRNGTHICMVFEVM--GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLN 157
+IRL F+ + T I +V E+ G R++ + ++ + I+K VL +
Sbjct: 85 IIRLYETFE----DNTDIYLVMELCTGGELFERVVHKRVFRE---SDAARIMKDVLSAVA 137
Query: 158 YLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDP 217
Y H + + H D+KPEN L D S DS +
Sbjct: 138 YCH-KLNVAHRDLKPENFLFLTD-----------------------SPDSPL-------- 165
Query: 218 ANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAF 275
K+ D G A ++ T Y S +VL G YGP D WS M +
Sbjct: 166 ---------KLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMY 215
Query: 276 ELATG 280
L G
Sbjct: 216 VLLCG 220
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R H + + + SLD D L P N
Sbjct: 110 NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 166
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 167 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 226
Query: 278 ATG 280
A G
Sbjct: 227 AAG 229
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 103/256 (40%), Gaps = 62/256 (24%)
Query: 30 YHVIRKLGWGHFSTVW----LSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
+ ++R LG G + V+ ++ K F A+K++K + + K
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIF-AMKVLKKAMIVRNA-------------KD 64
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
H+ A E + D + G + ++ E + L + + +GI +++
Sbjct: 65 TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDT 122
Query: 146 RTI-IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
+ ++ L +LH Q II+ D+KPENI++ +H+ +KL
Sbjct: 123 ACFYLAEISMALGHLH-QKGIIYRDLKPENIML----------------NHQGHVKL--- 162
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
+DF L + ++D +V G T +Y + E+L+ +G+ A
Sbjct: 163 -----TDFGLCKES--IHDGTVTHXFCG--------------TIEYMAPEILMRSGHNRA 201
Query: 265 ADIWSTACMAFELATG 280
D WS + +++ TG
Sbjct: 202 VDWWSLGALMYDMLTG 217
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 100/272 (36%), Gaps = 62/272 (22%)
Query: 119 MVFEVM-GYNLLRLIARSDYKGIHIQNVRT--IIKQVLEGLNYLHTQCRIIHTDIKPENI 175
+VFE M G ++L I +K H + +++ V L++LH + I H D+KPENI
Sbjct: 88 LVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENI 142
Query: 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNAC 235
L C ++V K G+ + L+ S S +L C
Sbjct: 143 L-CEHPNQV-----SPVKICDFGLGSGIKLNGDCSPIS--------------TPELLTPC 182
Query: 236 WIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRD 295
++ A E+ + Y D+WS + + L +G F + G + D
Sbjct: 183 GSAEYMAPEVVEAFSEEASI-----YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 296 DDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAE 355
P + +L + + +Y P K W H S A
Sbjct: 238 RGEAC-------PACQNMLFESIQEGKYEFPD---------KDWA---------HISCAA 272
Query: 356 ASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387
D + +L + K R SAA L+HPW+
Sbjct: 273 ----KDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 17 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 76 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKL------------TINKLLDMAAQ 117
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH D++ NIL+ C D + R+ D + G K P+
Sbjct: 118 IAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 174
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 52/143 (36%), Gaps = 49/143 (34%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ V+ I +++ L+YL Q RIIH D+KP+NIL+ D H
Sbjct: 115 ETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILL------------DEHGH-------- 153
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLI--- 257
V I D A + + T+ Y + E+
Sbjct: 154 -----------------------VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 258 GAGYGPAADIWSTACMAFELATG 280
GAGY A D WS A+EL G
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRG 213
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 192
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 193 LLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 278 ATG 280
A G
Sbjct: 253 AAG 255
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 95/279 (34%), Gaps = 98/279 (35%)
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQN--VRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174
ICM E+M +L + + KG I + I +++ L +LH++ +IH D+KP N
Sbjct: 127 ICM--ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 184
Query: 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA 234
+L+ + +G VK+ D G +
Sbjct: 185 VLI-----------------NALG--------------------------QVKMCDFGIS 201
Query: 235 CWIDDHFADEIQT--RQYRSVE----VLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
++ D A I + Y + E L GY +DIWS ELA + +D
Sbjct: 202 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD--- 258
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348
+ L +VE P Q+ +K
Sbjct: 259 --SWGTPFQQLKQVVEEPSP----------------------------------QLPADK 282
Query: 349 YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387
+ +++F DF L N K R + + ++HP+
Sbjct: 283 F------SAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 71/194 (36%), Gaps = 55/194 (28%)
Query: 98 EKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLN 157
E V+ + N + + G + +V E + L I + ++ + + + VL+ L+
Sbjct: 77 ENVVEMYNSYLV----GDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALS 130
Query: 158 YLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDP 217
LH Q +IH DIK ++IL+
Sbjct: 131 VLHAQG-VIHRDIKSDSILLT--------------------------------------- 150
Query: 218 ANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEVLIGAGYGPAADIWSTACMA 274
+D VK++D G + + T + + E++ YGP DIWS M
Sbjct: 151 ----HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 206
Query: 275 FELATGD--YLFDP 286
E+ G+ Y +P
Sbjct: 207 IEMVDGEPPYFNEP 220
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 71/194 (36%), Gaps = 55/194 (28%)
Query: 98 EKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLN 157
E V+ + N + + G + +V E + L I + ++ + + + VL+ L+
Sbjct: 81 ENVVEMYNSYLV----GDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALS 134
Query: 158 YLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDP 217
LH Q +IH DIK ++IL+
Sbjct: 135 VLHAQG-VIHRDIKSDSILLT--------------------------------------- 154
Query: 218 ANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEVLIGAGYGPAADIWSTACMA 274
+D VK++D G + + T + + E++ YGP DIWS M
Sbjct: 155 ----HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 210
Query: 275 FELATGD--YLFDP 286
E+ G+ Y +P
Sbjct: 211 IEMVDGEPPYFNEP 224
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 68/185 (36%), Gaps = 53/185 (28%)
Query: 100 VIRLLNDFKIYSRNGTHICMVFEVM--GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLN 157
+IRL F+ + T I +V E+ G R++ + ++ + I+K VL +
Sbjct: 68 IIRLYETFE----DNTDIYLVMELCTGGELFERVVHKRVFRE---SDAARIMKDVLSAVA 120
Query: 158 YLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDP 217
Y H + + H D+KPEN L D S DS +
Sbjct: 121 YCH-KLNVAHRDLKPENFLFLTD-----------------------SPDSPL-------- 148
Query: 218 ANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAF 275
K+ D G A ++ T Y S +VL G YGP D WS M +
Sbjct: 149 ---------KLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMY 198
Query: 276 ELATG 280
L G
Sbjct: 199 VLLCG 203
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 115/320 (35%), Gaps = 61/320 (19%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ IR LG G F V L+ + A+K++K D + D + + K + + H
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH- 83
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
+ TQ L F+ R M F V G +L+ I +S + R
Sbjct: 84 -PFLTQ-------LFCCFQTPDR--LFFVMEF-VNGGDLMFHIQKS--RRFDEARARFYA 130
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
+++ L +LH + II+ D+K +N+L+ D H K +
Sbjct: 131 AEIISALMFLHDK-GIIYRDLKLDNVLL------------DHEGHCK------------L 165
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWS 269
+DF + E V A C D+ A EI YGPA D W+
Sbjct: 166 ADFGM---CKEGICNGVTTATF---CGTPDYIAPEILQEML----------YGPAVDWWA 209
Query: 270 TACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329
+ +E+ G F E +DD I+ P + L+ F +
Sbjct: 210 MGVLLYEMLCGHAPF------EAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNP 263
Query: 330 FRRIDNLKPWGLYQVLTEKY 349
R+ +L G + +L +
Sbjct: 264 TMRLGSLTQGGEHAILRHPF 283
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 70/185 (37%), Gaps = 53/185 (28%)
Query: 109 IYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN--VRTIIKQVLEGLNYLHTQCRII 166
++ ICM E+M +L + + KG I + I +++ L +LH++ +I
Sbjct: 75 LFREGDVWICM--ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISV 226
H D+KP N+L+ + +G V
Sbjct: 133 HRDVKPSNVLI-----------------NALG--------------------------QV 149
Query: 227 KIADLGNACWIDDHFADEIQT--RQYRSVE----VLIGAGYGPAADIWSTACMAFELATG 280
K+ D G + ++ D A +I + Y + E L GY +DIWS ELA
Sbjct: 150 KMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAIL 209
Query: 281 DYLFD 285
+ +D
Sbjct: 210 RFPYD 214
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R H + + + SLD D L P N
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 192
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T +Y + E+++ GY A D W+ + +E+
Sbjct: 193 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 278 ATG 280
A G
Sbjct: 253 AAG 255
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 98/267 (36%), Gaps = 76/267 (28%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-------KSDQVYADTARDEIVLLKAVG 82
Y V++ +G G F V L + A+K++ +SD + RD +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 132
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIH 141
S V++L F+ + ++ MV E M G +L+ L++ D +
Sbjct: 133 --------------SPWVVQLFYAFQ----DDRYLYMVMEYMPGGDLVNLMSNYD---VP 171
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ R +V+ L+ +H+ IH D+KP+N+L+ D + H K
Sbjct: 172 EKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLL------------DKSGHLK----- 213
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG- 260
++DF N+ + A + T Y S EVL G
Sbjct: 214 -------LADFGTCMKMNKEGMVRCDTA---------------VGTPDYISPEVLKSQGG 251
Query: 261 ---YGPAADIWSTACMAFELATGDYLF 284
YG D WS +E+ GD F
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 98/267 (36%), Gaps = 76/267 (28%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-------KSDQVYADTARDEIVLLKAVG 82
Y V++ +G G F V L + A+K++ +SD + RD +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 127
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIH 141
S V++L F+ + ++ MV E M G +L+ L++ D +
Sbjct: 128 --------------SPWVVQLFYAFQ----DDRYLYMVMEYMPGGDLVNLMSNYD---VP 166
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ R +V+ L+ +H+ IH D+KP+N+L+ D + H K
Sbjct: 167 EKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLL------------DKSGHLK----- 208
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG- 260
++DF N+ + A + T Y S EVL G
Sbjct: 209 -------LADFGTCMKMNKEGMVRCDTA---------------VGTPDYISPEVLKSQGG 246
Query: 261 ---YGPAADIWSTACMAFELATGDYLF 284
YG D WS +E+ GD F
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 25/153 (16%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEI-----VLLKAVGRK 84
+H ++ +G G F V L+ ++ F A+K+++ + I VLLK V
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
V ++ Q ++K+ +L+ Y G + Y+L R + +
Sbjct: 100 FLV-GLHFSFQTADKLYFVLD----YINGGE--------LFYHLQRERCFLEPRA----- 141
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
R ++ L YLH+ I++ D+KPENIL+
Sbjct: 142 -RFYAAEIASALGYLHS-LNIVYRDLKPENILL 172
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 215 LDPANEVYD--ISVKIADLGNACWI--DDHFADE-IQTRQYRSVEVLIGAGYGPAADIWS 269
L PAN D +VK+ D G A + D FA + T Y S E + Y +DIWS
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 270 TACMAFELA 278
C+ +EL
Sbjct: 202 LGCLLYELC 210
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 215 LDPANEVYD--ISVKIADLGNACWI--DDHFADE-IQTRQYRSVEVLIGAGYGPAADIWS 269
L PAN D +VK+ D G A + D FA + T Y S E + Y +DIWS
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 270 TACMAFELA 278
C+ +EL
Sbjct: 202 LGCLLYELC 210
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 98/267 (36%), Gaps = 76/267 (28%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-------KSDQVYADTARDEIVLLKAVG 82
Y V++ +G G F V L + A+K++ +SD + RD +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 132
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIH 141
S V++L F+ + ++ MV E M G +L+ L++ D +
Sbjct: 133 --------------SPWVVQLFYAFQ----DDRYLYMVMEYMPGGDLVNLMSNYD---VP 171
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ R +V+ L+ +H+ IH D+KP+N+L+ D + H K
Sbjct: 172 EKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLL------------DKSGHLK----- 213
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG- 260
++DF N+ + A + T Y S EVL G
Sbjct: 214 -------LADFGTCMKMNKEGMVRCDTA---------------VGTPDYISPEVLKSQGG 251
Query: 261 ---YGPAADIWSTACMAFELATGDYLF 284
YG D WS +E+ GD F
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDY-------DKVRRMARDATKHHK------ 196
K++L+ +N+ ++ + N+ M ++Y +RR+ R + H +
Sbjct: 92 KRILQAVNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 197 -IGMKLPMSLDSTMSDFSLLDPANEVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSV 253
+ + SLD D L P N + D +++ D G A + T +Y +
Sbjct: 151 VLTFEYLHSLDLIYRD---LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 254 EVLIGAGYGPAADIWSTACMAFELATG 280
E+++ GY A D W+ + +++A G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 105/273 (38%), Gaps = 64/273 (23%)
Query: 119 MVFEVM-GYNLLRLIARSDYKGIHIQNVRT--IIKQVLEGLNYLHTQCRIIHTDIKPENI 175
+VFE M G ++L I +K H + +++ V L++LH + I H D+KPENI
Sbjct: 88 LVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENI 142
Query: 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLD-STMSDFSLLDPANEVYDISVKIADLGNA 234
L C ++V + +G + ++ D S +S LL P ++ ++ +
Sbjct: 143 L-CEHPNQVSPV---KICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA--- 195
Query: 235 CWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSR 294
F++E Y D+WS + + L +G F + G +
Sbjct: 196 ------FSEEASI-------------YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW 236
Query: 295 DDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKA 354
D P + +L + + +Y P K W H S A
Sbjct: 237 DRGEAC-------PACQNMLFESIQEGKYEFPD---------KDWA---------HISCA 271
Query: 355 EASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387
D + +L + K R SAA L+HPW+
Sbjct: 272 A----KDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 49/197 (24%)
Query: 117 ICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175
+C+V +M G +L I G ++ GL LH + RI++ D+KPENI
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENI 317
Query: 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNAC 235
L+ D H +I SD L E I ++ +G
Sbjct: 318 LL------------DDHGHIRI------------SDLGLAVHVPEGQTIKGRVGTVG--- 350
Query: 236 WIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRD 295
Y + EV+ Y + D W+ C+ +E+ G F + K+ R+
Sbjct: 351 --------------YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK-KKIKRE 395
Query: 296 DDHLAHIVELVGPIPKE 312
+ + LV +P+E
Sbjct: 396 E-----VERLVKEVPEE 407
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 49/197 (24%)
Query: 117 ICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175
+C+V +M G +L I G ++ GL LH + RI++ D+KPENI
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENI 317
Query: 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNAC 235
L+ D H +I SD L E I ++ +G
Sbjct: 318 LL------------DDHGHIRI------------SDLGLAVHVPEGQTIKGRVGTVG--- 350
Query: 236 WIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRD 295
Y + EV+ Y + D W+ C+ +E+ G F + K+ R+
Sbjct: 351 --------------YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK-KKIKRE 395
Query: 296 DDHLAHIVELVGPIPKE 312
+ + LV +P+E
Sbjct: 396 E-----VERLVKEVPEE 407
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 99 KVIRLLNDFKIYSRNGTHIC-MVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLN 157
++++ N + R+G + +V E +G L+ RS + + + + ++L L+
Sbjct: 140 SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK---RSKGQKLPVAEAIAYLLEILPALS 196
Query: 158 YLHTQCRIIHTDIKPENILMC 178
YLH+ +++ D+KPENI++
Sbjct: 197 YLHS-IGLVYNDLKPENIMLT 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 19 PVQIGDLFNFRY-HVIRKLGWGHFSTVWL-SWD-LQDKT--FVALKIVKSD--QVYADTA 71
P +F+ RY IR LG GHF V L +D D T VA+K +K+D +
Sbjct: 4 PASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGW 63
Query: 72 RDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRL 131
+ EI +L+ + + + EK ++L+ ++ + L
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY---------------------VPL 102
Query: 132 IARSDY---KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
+ DY I + + +Q+ EG+ YLH+Q IH ++ N+L+ D D++ ++
Sbjct: 103 GSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ-HYIHRNLAARNVLL--DNDRLVKIG 159
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++ +LG G F VW+ + T VA+K +K + D E L+K + + V A
Sbjct: 13 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 71
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
TQ +I Y NG+ + + G L I + + Q
Sbjct: 72 VVTQEPIYII------TEYMENGSLVDFLKTPSGIKL------------TINKLLDMAAQ 113
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILM-----CVDYD-KVRRMARDATKHHKIGMKLPM 203
+ EG+ ++ + IH +++ NIL+ C D + R+ D + G K P+
Sbjct: 114 IAEGMAFIEER-NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 170
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 48/130 (36%), Gaps = 29/130 (22%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
I Q+ E + +LH++ ++H D+KP NI +D D K G+ M D
Sbjct: 169 IFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMD---------DVVKVGDFGLVTAMDQDE 218
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADI 267
PA + ++ T+ Y S E + G Y DI
Sbjct: 219 EEQTVLTPMPAYATH-------------------XGQVGTKLYMSPEQIHGNNYSHKVDI 259
Query: 268 WSTACMAFEL 277
+S + FEL
Sbjct: 260 FSLGLILFEL 269
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 22/180 (12%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ +++ +G G F V +K+ +D+V+A ++ +LK
Sbjct: 76 FEILKVIGRGAFGEV-----------AVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
K I L+ + N ++ M + V G +LL L+++ + + + + R +
Sbjct: 125 RDVLVNGDSKWITTLH-YAFQDDNNLYLVMDYYVGG-DLLTLLSKFEDR-LPEEMARFYL 181
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILM-------CVDYDKVRRMARDATKHHKIGMKLP 202
+++ ++ +H Q +H DIKP+NILM D+ ++ D T + + P
Sbjct: 182 AEMVIAIDSVH-QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTP 240
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 48/130 (36%), Gaps = 29/130 (22%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
I Q+ E + +LH++ ++H D+KP NI +D D K G+ M D
Sbjct: 123 IFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMD---------DVVKVGDFGLVTAMDQDE 172
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADI 267
PA + ++ T+ Y S E + G Y DI
Sbjct: 173 EEQTVLTPMPAYARH-------------------TGQVGTKLYMSPEQIHGNSYSHKVDI 213
Query: 268 WSTACMAFEL 277
+S + FEL
Sbjct: 214 FSLGLILFEL 223
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 34/180 (18%)
Query: 19 PVQIGDLFNFRY-HVIRKLGWGHFSTVWL-SWD-LQDKT--FVALKIVKSD--QVYADTA 71
P +F+ RY IR LG GHF V L +D D T VA+K +K+D +
Sbjct: 4 PASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGW 63
Query: 72 RDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRL 131
+ EI +L+ + + + EK ++L+ ++ + L
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY---------------------VPL 102
Query: 132 IARSDY---KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
+ DY I + + +Q+ EG+ YLH Q IH ++ N+L+ D D++ ++
Sbjct: 103 GSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRNLAARNVLL--DNDRLVKIG 159
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 69/184 (37%), Gaps = 49/184 (26%)
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
IC+VFE M + L R+ + + + V EG+ YL + +IH D+ N L
Sbjct: 77 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-EASVIHRDLAARNCL 135
Query: 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW 236
+ N+V +K++D G +
Sbjct: 136 V---------------------------------------GENQV----IKVSDFGMTRF 152
Query: 237 I-DDHFADEIQTR---QYRSVEVLIGAGYGPAADIWSTACMAFEL-ATGDYLFDPKAGKE 291
+ DD + T+ ++ S EV + Y +D+WS + +E+ + G ++ ++ E
Sbjct: 153 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
Query: 292 YSRD 295
D
Sbjct: 213 VVED 216
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDY-------DKVRRMARDATKHHK------ 196
K++L+ +N+ ++ + N+ M ++Y +RR+ R + H +
Sbjct: 92 KRILQAVNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 197 -IGMKLPMSLDSTMSDFSLLDPANEVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSV 253
+ + SLD D L P N + D +++ D G A + T +Y +
Sbjct: 151 VLTFEYLHSLDLIYRD---LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 254 EVLIGAGYGPAADIWSTACMAFELATG 280
+++ GY A D W+ + +E+A G
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 66/255 (25%)
Query: 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93
+ LG G FS + A+KI+ S ++ A+T + EI LK N+
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKII-SKRMEANTQK-EITALKLCEGHPNI------ 68
Query: 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQV 152
++L F + H +V E++ G L I + K I++++
Sbjct: 69 -------VKLHEVF----HDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKL 115
Query: 153 LEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDF 212
+ ++++H ++H D+KPEN+L + D +L+ + DF
Sbjct: 116 VSAVSHMH-DVGVVHRDLKPENLLFTDEND---------------------NLEIKIIDF 153
Query: 213 S---LLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWS 269
L P N+ L C+ T Y + E+L GY + D+WS
Sbjct: 154 GFARLKPPDNQ---------PLKTPCF----------TLHYAAPELLNQNGYDESCDLWS 194
Query: 270 TACMAFELATGDYLF 284
+ + + +G F
Sbjct: 195 LGVILYTMLSGQVPF 209
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 22/180 (12%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ +++ +G G FS V +K+ ++ QVYA ++ +LK
Sbjct: 63 FEILKVIGRGAFSEV-----------AVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREE 111
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
+ I L+ F N ++ M + V G +LL L+++ + I + R +
Sbjct: 112 RDVLVNGDRRWITQLH-FAFQDENYLYLVMEYYVGG-DLLTLLSKFGER-IPAEMARFYL 168
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILM-------CVDYDKVRRMARDATKHHKIGMKLP 202
+++ ++ +H + +H DIKP+NIL+ D+ ++ D T + + P
Sbjct: 169 AEIVMAIDSVH-RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTP 227
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 29/38 (76%), Gaps = 2/38 (5%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185
+ +Q+ +G++Y+H++ ++IH D+KP NI + VD +V+
Sbjct: 141 LFEQITKGVDYIHSK-KLIHRDLKPSNIFL-VDTKQVK 176
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 49/184 (26%)
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
IC+V E M + L R+ + + + V EG+ YL C +IH D+ N L
Sbjct: 78 ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCL 136
Query: 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW 236
+ N+V +K++D G +
Sbjct: 137 V---------------------------------------GENQV----IKVSDFGMTRF 153
Query: 237 I-DDHFADEIQTR---QYRSVEVLIGAGYGPAADIWSTACMAFEL-ATGDYLFDPKAGKE 291
+ DD + T+ ++ S EV + Y +D+WS + +E+ + G ++ ++ E
Sbjct: 154 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213
Query: 292 YSRD 295
D
Sbjct: 214 VVED 217
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 104/265 (39%), Gaps = 86/265 (32%)
Query: 59 KIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV--IRLLNDFKIYSRNGT- 115
++VK Q++ R++ ++K +GR + + + +E++ +++LN +++ R T
Sbjct: 80 QLVKEMQLH----REDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 135
Query: 116 ----------------------------HICMVFEV-MGYNLLRLIARSDYKGIHIQNVR 146
H+ +V + +G +LL L+++ + K + R
Sbjct: 136 CFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMAR 194
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV-------DYDKVRRMARDATKHHKIGM 199
I +++ ++ +H Q +H DIKP+N+L+ V D+ +M D T + +
Sbjct: 195 FYIGEMVLAIDSIH-QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
P D+ + EI +++E +G
Sbjct: 254 GTP------------------------------------DYISPEI----LQAMEDGMGK 273
Query: 260 GYGPAADIWSTACMAFELATGDYLF 284
YGP D WS +E+ G+ F
Sbjct: 274 -YGPECDWWSLGVCMYEMLYGETPF 297
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 12/125 (9%)
Query: 115 THICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174
T + + E+MG +L R I + + + +++ L YL + +IH D+KP N
Sbjct: 97 TDVFIAMELMGTCAEKLKKRMQGP-IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSN 155
Query: 175 ILM-------CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVK 227
IL+ D+ R+ D K G M+ + DP YDI
Sbjct: 156 ILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPER----IDPPDPTKPDYDIRAD 211
Query: 228 IADLG 232
+ LG
Sbjct: 212 VWSLG 216
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 81/183 (44%), Gaps = 45/183 (24%)
Query: 59 KIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV--IRLLNDFKIYSRNGT- 115
++VK Q++ R++ ++K +GR + + + +E++ +++LN +++ R T
Sbjct: 64 QLVKEMQLH----REDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 119
Query: 116 ----------------------------HICMVFEV-MGYNLLRLIARSDYKGIHIQNVR 146
H+ +V + +G +LL L+++ + K + R
Sbjct: 120 CFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMAR 178
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV-------DYDKVRRMARDATKHHKIGM 199
I +++ ++ +H Q +H DIKP+N+L+ V D+ +M D T + +
Sbjct: 179 FYIGEMVLAIDSIH-QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 200 KLP 202
P
Sbjct: 238 GTP 240
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 226 VKIADLGNACWIDDHFADEIQTRQ------YRSVEVLIGAGYGPAADIWSTACMAFELAT 279
+KIAD G +H D + TR+ Y + E++ YG + D W+ + +E+
Sbjct: 159 IKIADFG---MCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA 215
Query: 280 GDYLFD 285
G FD
Sbjct: 216 GQPPFD 221
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 101/275 (36%), Gaps = 65/275 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI++ + + A+DE+ H+
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI---IAKDEVA-----------HT 55
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
+ L K + +C V E G L ++R + + R
Sbjct: 56 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFY 113
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L YLH++ +++ DIK EN+++ D H KI
Sbjct: 114 GAEIVSALEYLHSR-DVVYRDIKLENLML------------DKDGHIKI----------- 149
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L IS A + C T +Y + EVL YG A D W
Sbjct: 150 -TDFGLCKEG-----IS-DGATMKTFCG----------TPEYLAPEVLEDNDYGRAVDWW 192
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+ +E+ G F Y++D + L ++
Sbjct: 193 GLGVVMYEMMCGRLPF-------YNQDHERLFELI 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 101/275 (36%), Gaps = 65/275 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI++ + + A+DE+ H+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI---IAKDEVA-----------HT 52
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
+ L K + +C V E G L ++R + + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFY 110
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L YLH++ +++ DIK EN+++ D H KI
Sbjct: 111 GAEIVSALEYLHSR-DVVYRDIKLENLML------------DKDGHIKI----------- 146
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L IS A + C T +Y + EVL YG A D W
Sbjct: 147 -TDFGLCKEG-----IS-DGATMKTFCG----------TPEYLAPEVLEDNDYGRAVDWW 189
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+ +E+ G F Y++D + L ++
Sbjct: 190 GLGVVMYEMMCGRLPF-------YNQDHERLFELI 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 101/275 (36%), Gaps = 65/275 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI++ + + A+DE+ H+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI---IAKDEVA-----------HT 52
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
+ L K + +C V E G L ++R + + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFY 110
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L YLH++ +++ DIK EN+++ D H KI
Sbjct: 111 GAEIVSALEYLHSR-DVVYRDIKLENLML------------DKDGHIKI----------- 146
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L IS A + C T +Y + EVL YG A D W
Sbjct: 147 -TDFGLCKEG-----IS-DGATMKTFCG----------TPEYLAPEVLEDNDYGRAVDWW 189
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+ +E+ G F Y++D + L ++
Sbjct: 190 GLGVVMYEMMCGRLPF-------YNQDHERLFELI 217
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 96/246 (39%), Gaps = 70/246 (28%)
Query: 50 LQDKTFVALKIVKSDQVY-------ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102
+ D VA+K V+ D++ E+VLLK V SS ++ VIR
Sbjct: 73 VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV-------SSGFSG-----VIR 120
Query: 103 LLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT 161
LL+ F+ R + + ++ +L I ++ + + R+ QVLE + + H
Sbjct: 121 LLDWFE---RPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHN 175
Query: 162 QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEV 221
C ++H DIK ENIL+ ++ +
Sbjct: 176 -CGVLHRDIKDENILIDLNRGE-------------------------------------- 196
Query: 222 YDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGY-GPAADIWSTACMAFELAT 279
+K+ D G+ + D + D TR Y E + Y G +A +WS + +++
Sbjct: 197 ----LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252
Query: 280 GDYLFD 285
GD F+
Sbjct: 253 GDIPFE 258
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 101/275 (36%), Gaps = 65/275 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI++ + + A+DE+ H+
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI---IAKDEVA-----------HT 57
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
+ L K + +C V E G L ++R + + R
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFY 115
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L YLH++ +++ DIK EN+++ D H KI
Sbjct: 116 GAEIVSALEYLHSR-DVVYRDIKLENLML------------DKDGHIKI----------- 151
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L IS A + C T +Y + EVL YG A D W
Sbjct: 152 -TDFGLCKEG-----IS-DGATMKXFC----------GTPEYLAPEVLEDNDYGRAVDWW 194
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+ +E+ G F Y++D + L ++
Sbjct: 195 GLGVVMYEMMCGRLPF-------YNQDHERLFELI 222
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 155 GLNYLHTQC--RIIHTDIKPENILMCVDYDKV 184
GL YLH C +IIH D+K NIL+ +++ V
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 155 GLNYLHTQC--RIIHTDIKPENILMCVDYDKV 184
GL YLH C +IIH D+K NIL+ +++ V
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 182
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 19/123 (15%)
Query: 174 NILMCVDY-------DKVRRMARDATKHHK-------IGMKLPMSLDSTMSDFSLLDPAN 219
N+ M ++Y +RR+ R + H + + + SLD D L P N
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD---LKPEN 171
Query: 220 EVYDIS--VKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277
+ D +++ D G A + T + + E+++ GY A D W+ + +E+
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 278 ATG 280
A G
Sbjct: 232 AAG 234
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR-DEIVLL 78
V++G+L R V R L G F+ V+ + D+ ALK + S++ + A E+ +
Sbjct: 23 VELGEL---RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFM 79
Query: 79 KAVGRKSNV--HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSD 136
K + N+ SA + E ++ E+ L+ + + +
Sbjct: 80 KKLSGHPNIVQFCSAASIGKEES-----------DTGQAEFLLLTELCKGQLVEFLKKME 128
Query: 137 YKG-IHIQNVRTIIKQVLEGLNYLHTQ-CRIIHTDIKPENILM 177
+G + V I Q + ++H Q IIH D+K EN+L+
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL 171
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 101/275 (36%), Gaps = 65/275 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI++ + + A+DE+ H+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI---IAKDEVA-----------HT 52
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
+ L K + +C V E G L ++R + + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFY 110
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L YLH++ +++ DIK EN+++ D H KI
Sbjct: 111 GAEIVSALEYLHSR-DVVYRDIKLENLML------------DKDGHIKI----------- 146
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L IS A + C T +Y + EVL YG A D W
Sbjct: 147 -TDFGLCKEG-----IS-DGATMKXFCG----------TPEYLAPEVLEDNDYGRAVDWW 189
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+ +E+ G F Y++D + L ++
Sbjct: 190 GLGVVMYEMMCGRLPF-------YNQDHERLFELI 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 101/275 (36%), Gaps = 65/275 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI++ + + A+DE+ H+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI---IAKDEVA-----------HT 52
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
+ L K + +C V E G L ++R + + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFY 110
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L YLH++ +++ DIK EN+++ D H KI
Sbjct: 111 GAEIVSALEYLHSR-DVVYRDIKLENLML------------DKDGHIKI----------- 146
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L IS A + C T +Y + EVL YG A D W
Sbjct: 147 -TDFGLCKEG-----IS-DGATMKXFC----------GTPEYLAPEVLEDNDYGRAVDWW 189
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+ +E+ G F Y++D + L ++
Sbjct: 190 GLGVVMYEMMCGRLPF-------YNQDHERLFELI 217
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 49/144 (34%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
I +++ L +LH++ +IH D+KP N+L+ + +G
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLI-----------------NALGQ-------- 175
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQT--RQYRSVE----VLIGAGY 261
VK D G + ++ D A +I + Y + E L GY
Sbjct: 176 ------------------VKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 262 GPAADIWSTACMAFELATGDYLFD 285
+DIWS ELA + +D
Sbjct: 218 SVKSDIWSLGITXIELAILRFPYD 241
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 101/275 (36%), Gaps = 65/275 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI++ + + A+DE+ H+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI---IAKDEVA-----------HT 52
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
+ L K + +C V E G L ++R + + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFY 110
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ L YLH++ +++ DIK EN+++ D H KI
Sbjct: 111 GAEIVSALEYLHSR-DVVYRDIKLENLML------------DKDGHIKI----------- 146
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF L IS A + C T +Y + EVL YG A D W
Sbjct: 147 -TDFGLCKEG-----IS-DGATMKXFCG----------TPEYLAPEVLEDNDYGRAVDWW 189
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+ +E+ G F Y++D + L ++
Sbjct: 190 GLGVVMYEMMCGRLPF-------YNQDHERLFELI 217
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 34/174 (19%)
Query: 25 LFNFRY-HVIRKLGWGHFSTVWL-SWD-LQDKT--FVALKIVKSDQ--VYADTARDEIVL 77
+F+ RY IR LG GHF V L +D D T VA+K +K+D + + EI +
Sbjct: 27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDI 86
Query: 78 LKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
L+ + + + A ++L V E + LR DY
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQL----------------VMEYVPLGSLR-----DY 125
Query: 138 ---KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
I + + +Q+ EG+ YLH Q IH D+ N+L+ D D++ ++
Sbjct: 126 LPRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLL--DNDRLVKIG 176
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 34/150 (22%)
Query: 35 KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNT 94
++G G F TV+ D LK+V R+E+ +L+ + + Y T
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR-------T 147
+ + ++ T C S YK +H+Q +
Sbjct: 103 KDNLAIV-------------TQWCE-------------GSSLYKHLHVQETKFQMFQLID 136
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
I +Q +G++YLH + IIH D+K NI +
Sbjct: 137 IARQTAQGMDYLHAK-NIIHRDMKSNNIFL 165
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158
++R+++ ++ + +V E + G L I + + I+K + E + Y
Sbjct: 87 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 146
Query: 159 LHTQCRIIHTDIKPENIL 176
LH+ I H D+KPEN+L
Sbjct: 147 LHS-INIAHRDVKPENLL 163
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 26/176 (14%)
Query: 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93
+KLG G F VW++ T VA+K +K + + E ++K
Sbjct: 194 KKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVMK-------------- 238
Query: 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVL 153
T +K+++L + ++ +I F G +LL + + + + Q+
Sbjct: 239 TLQHDKLVKL---HAVVTKEPIYIITEFMAKG-SLLDFLKSDEGSKQPLPKLIDFSAQIA 294
Query: 154 EGLNYLHTQCRIIHTDIKPENI-----LMCVDYD-KVRRMARDATKHHKIGMKLPM 203
EG+ ++ Q IH D++ NI L+C D + R+ D + G K P+
Sbjct: 295 EGMAFIE-QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 349
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 20/146 (13%)
Query: 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93
+KLG G F VW++ T VA+K +K + + E ++K
Sbjct: 188 KKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVMK-------------- 232
Query: 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVL 153
T +K+++L + ++ +I F G +LL + + + + Q+
Sbjct: 233 TLQHDKLVKL---HAVVTKEPIYIITEFMAKG-SLLDFLKSDEGSKQPLPKLIDFSAQIA 288
Query: 154 EGLNYLHTQCRIIHTDIKPENILMCV 179
EG+ ++ Q IH D++ NIL+
Sbjct: 289 EGMAFIE-QRNYIHRDLRAANILVSA 313
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158
++R+++ ++ + +V E + G L I + + I+K + E + Y
Sbjct: 77 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 136
Query: 159 LHTQCRIIHTDIKPENIL 176
LH+ I H D+KPEN+L
Sbjct: 137 LHS-INIAHRDVKPENLL 153
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158
++R+++ ++ + +V E + G L I + + I+K + E + Y
Sbjct: 79 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 138
Query: 159 LHTQCRIIHTDIKPENIL 176
LH+ I H D+KPEN+L
Sbjct: 139 LHS-INIAHRDVKPENLL 155
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
I+K + E + YLH+ I H D+KPEN+L
Sbjct: 172 IMKSIGEAIQYLHS-INIAHRDVKPENLL 199
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158
++R+++ ++ + +V E + G L I + + I+K + E + Y
Sbjct: 73 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132
Query: 159 LHTQCRIIHTDIKPENIL 176
LH+ I H D+KPEN+L
Sbjct: 133 LHS-INIAHRDVKPENLL 149
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
I+K + E + YLH+ I H D+KPEN+L
Sbjct: 166 IMKSIGEAIQYLHS-INIAHRDVKPENLL 193
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158
++R+++ ++ + +V E + G L I + + I+K + E + Y
Sbjct: 78 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 137
Query: 159 LHTQCRIIHTDIKPENIL 176
LH+ I H D+KPEN+L
Sbjct: 138 LHS-INIAHRDVKPENLL 154
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 69 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 109
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 110 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 138
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158
++R+++ ++ + +V E + G L I + + I+K + E + Y
Sbjct: 71 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 130
Query: 159 LHTQCRIIHTDIKPENIL 176
LH+ I H D+KPEN+L
Sbjct: 131 LHS-INIAHRDVKPENLL 147
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158
++R+++ ++ + +V E + G L I + + I+K + E + Y
Sbjct: 73 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132
Query: 159 LHTQCRIIHTDIKPENIL 176
LH+ I H D+KPEN+L
Sbjct: 133 LHS-INIAHRDVKPENLL 149
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
I+K + E + YLH+ I H D+KPEN+L
Sbjct: 122 IMKSIGEAIQYLHS-INIAHRDVKPENLL 149
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
I+K + E + YLH+ I H D+KPEN+L
Sbjct: 121 IMKSIGEAIQYLHS-INIAHRDVKPENLL 148
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
I+K + E + YLH+ I H D+KPEN+L
Sbjct: 120 IMKSIGEAIQYLHS-INIAHRDVKPENLL 147
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 67 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 107
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 108 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 136
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 26/176 (14%)
Query: 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93
+KLG G F VW++ T VA+K +K + + E ++K
Sbjct: 21 KKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVMK-------------- 65
Query: 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVL 153
T +K+++L + ++ +I F G +LL + + + + Q+
Sbjct: 66 TLQHDKLVKL---HAVVTKEPIYIITEFMAKG-SLLDFLKSDEGSKQPLPKLIDFSAQIA 121
Query: 154 EGLNYLHTQCRIIHTDIKPENI-----LMCVDYD-KVRRMARDATKHHKIGMKLPM 203
EG+ ++ Q IH D++ NI L+C D + R+ D + G K P+
Sbjct: 122 EGMAFIE-QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 69 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 109
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 110 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 138
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 69 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 109
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 110 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 138
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 69 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 109
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 110 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 138
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 69 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 109
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 110 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 138
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 69 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 109
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 110 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 138
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 68
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 69 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 109
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 110 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 138
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNV 87
+ +++ LG G + V L+ + + VA+KIV + + + EI + K + ++ V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ + + + + F Y G +F+ + ++ G+ + +
Sbjct: 68 KFYGHRREGNIQYL-----FLEYCSGGE----LFDRIEPDI----------GMPEPDAQR 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ G+ YLH I H DIKPEN+L+
Sbjct: 109 FFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 36/175 (20%)
Query: 25 LFNFRY-HVIRKLGWGHFSTVWL-SWD-LQDKT--FVALKIVKSD---QVYADTARDEIV 76
+F+ RY IR LG GHF V L +D D T VA+K +K Q+ + R EI
Sbjct: 4 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR-EIE 62
Query: 77 LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSD 136
+L+ + + V EK ++L+ ++ + L + D
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY---------------------VPLGSLRD 101
Query: 137 YKGIHIQNVRTII---KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
Y H + ++ +Q+ EG+ YLH Q IH + N+L+ D D++ ++
Sbjct: 102 YLPRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLL--DNDRLVKIG 153
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 36/175 (20%)
Query: 25 LFNFRY-HVIRKLGWGHFSTVWL-SWD-LQDKT--FVALKIVKSD---QVYADTARDEIV 76
+F+ RY IR LG GHF V L +D D T VA+K +K Q+ + R EI
Sbjct: 5 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR-EIE 63
Query: 77 LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSD 136
+L+ + + V EK ++L+ ++ + L + D
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY---------------------VPLGSLRD 102
Query: 137 YKGIHIQNVRTII---KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
Y H + ++ +Q+ EG+ YLH Q IH + N+L+ D D++ ++
Sbjct: 103 YLPRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLL--DNDRLVKIG 154
>pdb|2IVN|A Chain A, Structure Of Up1 Protein
pdb|2IVO|A Chain A, Structure Of Up1 Protein
pdb|2IVO|B Chain B, Structure Of Up1 Protein
pdb|2IVO|C Chain C, Structure Of Up1 Protein
pdb|2IVO|D Chain D, Structure Of Up1 Protein
pdb|2IVP|A Chain A, Structure Of Up1 Protein
Length = 330
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 31 HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSS 90
IRK G + L++ Q+ F AL V +++ A T +DE+VL+ V + +
Sbjct: 205 EAIRKYRSGKYRVEDLAYSFQETAFAALVEV-TERAVAHTEKDEVVLVGGVAANNRLREM 263
Query: 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK-GIHIQNVRTII 149
+ + + + NG I Y LR+ YK GI + TI+
Sbjct: 264 LRIMTEDRGIKFFVPPYDLCRDNGAMIA-------YTGLRM-----YKAGISFRLEETIV 311
Query: 150 KQ 151
KQ
Sbjct: 312 KQ 313
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
I K + E + YLH+ I H D+KPEN+L
Sbjct: 166 IXKSIGEAIQYLHS-INIAHRDVKPENLL 193
>pdb|4HE8|H Chain H, Crystal Structure Of The Membrane Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|4HE8|C Chain C, Crystal Structure Of The Membrane Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|4HEA|H Chain H, Crystal Structure Of The Entire Respiratory Complex I From
Thermus Thermophilus
pdb|4HEA|Q Chain Q, Crystal Structure Of The Entire Respiratory Complex I From
Thermus Thermophilus
Length = 365
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAV 81
F RY + + GWG + L W L VAL + ++ +Y +A +VLL AV
Sbjct: 298 FRLRYDQLLRFGWGFLFPLALLWFLVTALVVALDLPRTYLLYL-SALSFLVLLGAV 352
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 103/268 (38%), Gaps = 57/268 (21%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALK-IVKSDQVYADTARDEIVLLKAVGRKS 85
N Y I+KLG G FS V L L D F ALK I+ +Q + A+ E + + +
Sbjct: 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPN 87
Query: 86 NVHSSAYNTQ---ASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ AY + A + LL FK GT L I R KG +
Sbjct: 88 ILRLVAYCLRERGAKHEAWLLLPFFK----RGT------------LWNEIERLKDKGNFL 131
Query: 143 Q--NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ ++ + GL +H + H D+KP NIL+ D+ + + D ++ +
Sbjct: 132 TEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLG---DEGQPVLMDLGSMNQACIH 187
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA---CWIDDHFADEIQTRQYRSVEVLI 257
++ + +L D A + IS + +L + C ID+
Sbjct: 188 ----VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDER----------------- 226
Query: 258 GAGYGPAADIWSTACMAFELATGDYLFD 285
D+WS C+ + + G+ +D
Sbjct: 227 -------TDVWSLGCVLYAMMFGEGPYD 247
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
G+ + + Q++ G+ YLH I H DIKPEN+L+
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLL 138
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
G+ + + Q++ G+ YLH I H DIKPEN+L+
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLL 137
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 155 GLNYLHTQCRIIHTDIKPENILM 177
GL+YLHT+ IIH D+K NIL+
Sbjct: 151 GLHYLHTRA-IIHRDVKSINILL 172
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 155 GLNYLHTQCRIIHTDIKPENILM 177
GL+YLHT+ IIH D+K NIL+
Sbjct: 151 GLHYLHTRA-IIHRDVKSINILL 172
>pdb|3GV0|A Chain A, Crystal Structure Of Laci Family Transcription Regulator
From Agrobacterium Tumefaciens
Length = 288
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 120 VFEVMGYNLLRLIARSDYKGIHI-QNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171
+ + G + + L+A + G+ I ++V + KQ E LN++ Q ++ DIK
Sbjct: 192 IVSISGSSTIALVAGFEAAGVKIGEDVDIVSKQSAEFLNWIKPQIHTVNEDIK 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,307,110
Number of Sequences: 62578
Number of extensions: 516014
Number of successful extensions: 3010
Number of sequences better than 100.0: 760
Number of HSP's better than 100.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 446
Number of HSP's that attempted gapping in prelim test: 1504
Number of HSP's gapped (non-prelim): 1421
length of query: 393
length of database: 14,973,337
effective HSP length: 101
effective length of query: 292
effective length of database: 8,652,959
effective search space: 2526664028
effective search space used: 2526664028
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)