Query psy12288
Match_columns 393
No_of_seqs 145 out of 1458
Neff 9.6
Searched_HMMs 46136
Date Fri Aug 16 23:29:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12288.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12288hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1290|consensus 100.0 7E-64 1.5E-68 457.6 29.8 380 4-389 53-556 (590)
2 KOG0667|consensus 100.0 3.3E-53 7.2E-58 402.8 23.2 311 18-388 176-507 (586)
3 KOG0615|consensus 100.0 6.6E-53 1.4E-57 378.9 16.8 257 25-389 169-443 (475)
4 KOG0593|consensus 100.0 1.6E-51 3.5E-56 356.5 17.0 281 28-388 2-289 (396)
5 KOG0661|consensus 100.0 8E-52 1.7E-56 378.0 12.4 284 26-389 8-297 (538)
6 KOG0575|consensus 100.0 6.6E-50 1.4E-54 376.5 22.9 255 22-388 8-274 (592)
7 KOG0663|consensus 100.0 8.4E-50 1.8E-54 350.1 18.1 284 28-388 76-366 (419)
8 KOG0659|consensus 100.0 1.3E-49 2.9E-54 338.9 18.6 278 28-388 2-286 (318)
9 KOG0581|consensus 100.0 6.9E-50 1.5E-54 356.8 16.9 256 29-390 80-342 (364)
10 KOG0600|consensus 100.0 2.5E-49 5.4E-54 364.2 16.9 280 27-387 116-404 (560)
11 KOG0671|consensus 100.0 1.3E-49 2.7E-54 355.0 12.8 330 18-391 79-414 (415)
12 KOG0598|consensus 100.0 1.2E-48 2.6E-53 348.7 18.8 251 27-389 24-287 (357)
13 KOG0660|consensus 100.0 9.3E-49 2E-53 348.1 17.2 286 26-390 20-317 (359)
14 KOG0592|consensus 100.0 9.9E-48 2.1E-52 356.4 18.8 252 28-390 73-345 (604)
15 KOG0616|consensus 100.0 4.6E-48 1E-52 334.2 14.2 252 27-390 43-304 (355)
16 KOG0605|consensus 100.0 2.8E-47 6E-52 353.5 19.5 253 27-390 140-452 (550)
17 KOG0583|consensus 100.0 1.1E-46 2.3E-51 354.7 22.1 253 25-388 14-280 (370)
18 PTZ00284 protein kinase; Provi 100.0 8.1E-46 1.8E-50 364.3 28.4 326 16-389 114-444 (467)
19 KOG0595|consensus 100.0 1.2E-46 2.7E-51 338.8 20.1 258 28-388 10-273 (429)
20 KOG0658|consensus 100.0 4.8E-47 1E-51 337.8 16.1 286 27-391 23-314 (364)
21 KOG0033|consensus 100.0 1.1E-48 2.4E-53 329.5 4.5 261 24-389 7-273 (355)
22 KOG0588|consensus 100.0 1.2E-46 2.5E-51 356.2 18.5 250 29-390 13-270 (786)
23 KOG0594|consensus 100.0 2.9E-46 6.2E-51 333.2 18.6 286 28-390 11-309 (323)
24 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.8E-44 4E-49 333.0 25.1 278 28-386 5-288 (288)
25 cd07848 STKc_CDKL5 Catalytic d 100.0 3.2E-44 7E-49 331.0 26.1 280 28-386 1-287 (287)
26 KOG0582|consensus 100.0 1.3E-44 2.8E-49 328.5 22.0 265 27-391 25-301 (516)
27 KOG0578|consensus 100.0 2.3E-45 5E-50 343.1 17.7 252 27-388 272-528 (550)
28 KOG0597|consensus 100.0 3.9E-45 8.4E-50 339.9 15.8 250 28-389 2-257 (808)
29 KOG0694|consensus 100.0 2.6E-44 5.7E-49 342.5 21.2 251 27-389 367-630 (694)
30 KOG0591|consensus 100.0 6.3E-46 1.4E-50 318.8 9.0 260 3-377 1-275 (375)
31 cd07874 STKc_JNK3 Catalytic do 100.0 6E-44 1.3E-48 339.3 23.7 303 16-389 2-317 (355)
32 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-43 4.4E-48 328.4 26.6 285 28-390 5-295 (303)
33 cd07876 STKc_JNK2 Catalytic do 100.0 6.7E-44 1.4E-48 339.5 22.7 303 15-388 5-320 (359)
34 PTZ00036 glycogen synthase kin 100.0 2E-43 4.4E-48 343.9 26.6 287 25-390 63-358 (440)
35 cd05612 STKc_PRKX_like Catalyt 100.0 7.6E-44 1.7E-48 329.4 22.2 250 28-389 1-260 (291)
36 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.3E-43 4.9E-48 333.0 23.7 284 29-391 1-298 (338)
37 cd07875 STKc_JNK1 Catalytic do 100.0 3.3E-43 7.1E-48 335.4 24.9 304 15-389 8-324 (364)
38 KOG0032|consensus 100.0 2.5E-43 5.4E-48 331.7 22.7 264 22-389 29-299 (382)
39 PTZ00263 protein kinase A cata 100.0 9E-44 1.9E-48 334.5 19.6 251 27-389 17-277 (329)
40 KOG0198|consensus 100.0 6E-44 1.3E-48 323.6 16.9 257 28-390 17-283 (313)
41 cd07862 STKc_CDK6 Catalytic do 100.0 7.6E-43 1.6E-47 322.4 24.6 282 28-386 1-290 (290)
42 PHA03212 serine/threonine kina 100.0 3.6E-43 7.7E-48 337.1 23.2 289 27-393 91-386 (391)
43 KOG0585|consensus 100.0 4.2E-44 9.2E-49 327.2 15.0 253 27-389 96-378 (576)
44 cd07863 STKc_CDK4 Catalytic do 100.0 1.7E-42 3.7E-47 319.6 25.8 281 29-386 1-288 (288)
45 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.2E-42 4.9E-47 322.3 24.7 282 28-390 6-293 (309)
46 PTZ00426 cAMP-dependent protei 100.0 7E-43 1.5E-47 329.5 21.5 260 18-389 20-290 (340)
47 cd05631 STKc_GRK4 Catalytic do 100.0 8.2E-43 1.8E-47 321.5 20.9 255 30-390 2-268 (285)
48 KOG0604|consensus 100.0 1.2E-43 2.6E-48 307.1 13.7 266 26-389 59-328 (400)
49 KOG0599|consensus 100.0 2.3E-44 4.9E-49 308.0 8.9 254 28-388 17-288 (411)
50 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6E-42 1.3E-46 318.2 25.3 285 28-393 6-296 (301)
51 cd07850 STKc_JNK Catalytic dom 100.0 2.8E-42 6.1E-47 327.6 23.4 303 16-388 1-316 (353)
52 cd07853 STKc_NLK Catalytic dom 100.0 2E-42 4.3E-47 331.0 21.9 286 29-390 1-295 (372)
53 KOG0662|consensus 100.0 4.5E-43 9.8E-48 282.9 14.5 280 29-390 3-290 (292)
54 KOG4717|consensus 100.0 7.8E-43 1.7E-47 321.3 17.7 257 25-391 15-278 (864)
55 KOG0610|consensus 100.0 7.1E-43 1.5E-47 314.7 16.7 287 27-390 76-399 (459)
56 cd05571 STKc_PKB Catalytic dom 100.0 1.5E-42 3.3E-47 325.4 19.4 244 34-389 1-257 (323)
57 KOG0670|consensus 100.0 4.5E-43 9.8E-48 323.1 15.4 312 16-388 420-751 (752)
58 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.8E-42 6E-47 325.1 20.7 258 28-389 1-263 (333)
59 cd07878 STKc_p38beta_MAPK11 Ca 100.0 7E-42 1.5E-46 323.7 23.5 286 26-390 13-305 (343)
60 cd05628 STKc_NDR1 Catalytic do 100.0 4.8E-42 1E-46 327.2 22.4 251 28-389 1-299 (363)
61 cd06649 PKc_MEK2 Catalytic dom 100.0 1.7E-41 3.6E-46 319.4 25.8 291 27-390 4-308 (331)
62 KOG0666|consensus 100.0 1.7E-43 3.7E-48 307.6 11.2 300 28-389 24-343 (438)
63 KOG0580|consensus 100.0 4.1E-43 8.8E-48 295.1 12.6 257 24-390 18-280 (281)
64 cd05599 STKc_NDR_like Catalyti 100.0 2.6E-42 5.6E-47 329.3 19.8 253 28-389 1-302 (364)
65 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.8E-42 8.3E-47 326.3 19.2 253 28-389 1-291 (350)
66 cd07868 STKc_CDK8 Catalytic do 100.0 5.7E-41 1.2E-45 313.9 25.8 293 33-386 6-317 (317)
67 KOG0192|consensus 100.0 1.5E-41 3.3E-46 317.0 21.3 246 28-382 41-298 (362)
68 cd05629 STKc_NDR_like_fungal C 100.0 8.1E-42 1.8E-46 327.3 19.7 251 28-389 1-311 (377)
69 cd05585 STKc_YPK1_like Catalyt 100.0 8E-42 1.7E-46 319.0 18.9 242 36-389 1-253 (312)
70 cd05589 STKc_PKN Catalytic dom 100.0 3.1E-41 6.6E-46 316.7 22.4 250 30-389 1-263 (324)
71 KOG0201|consensus 100.0 2.6E-43 5.7E-48 319.7 7.4 252 28-390 13-270 (467)
72 cd05626 STKc_LATS2 Catalytic d 100.0 2.5E-41 5.5E-46 324.2 21.5 253 29-389 2-311 (381)
73 cd05598 STKc_LATS Catalytic do 100.0 8.7E-42 1.9E-46 327.0 18.3 252 29-389 2-307 (376)
74 cd05625 STKc_LATS1 Catalytic d 100.0 1.8E-41 3.9E-46 325.5 20.1 252 29-389 2-311 (382)
75 cd05587 STKc_cPKC Catalytic do 100.0 4.9E-41 1.1E-45 315.4 21.9 250 29-389 1-263 (324)
76 PHA03207 serine/threonine kina 100.0 9.4E-41 2E-45 321.3 24.0 289 21-389 85-381 (392)
77 cd05593 STKc_PKB_gamma Catalyt 100.0 1.7E-41 3.8E-46 318.8 18.5 244 34-389 1-257 (328)
78 cd05614 STKc_MSK2_N N-terminal 100.0 3.4E-41 7.5E-46 317.5 20.5 254 29-389 1-273 (332)
79 cd05621 STKc_ROCK2 Catalytic d 100.0 3.4E-41 7.4E-46 321.5 20.4 257 24-389 39-310 (370)
80 cd05590 STKc_nPKC_eta Catalyti 100.0 5E-41 1.1E-45 314.6 21.1 245 34-389 1-259 (320)
81 cd05588 STKc_aPKC Catalytic do 100.0 6.6E-41 1.4E-45 315.1 21.9 252 34-389 1-268 (329)
82 cd05596 STKc_ROCK Catalytic do 100.0 3.6E-41 7.8E-46 321.6 20.3 252 27-389 42-310 (370)
83 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-40 3E-45 306.7 23.2 255 29-389 1-267 (285)
84 cd05595 STKc_PKB_beta Catalyti 100.0 4.5E-41 9.7E-46 315.4 20.0 244 34-389 1-257 (323)
85 cd07867 STKc_CDC2L6 Catalytic 100.0 3.5E-40 7.7E-45 308.5 25.5 293 33-386 6-317 (317)
86 cd05616 STKc_cPKC_beta Catalyt 100.0 1.1E-40 2.4E-45 312.9 22.1 250 29-389 1-263 (323)
87 cd05620 STKc_nPKC_delta Cataly 100.0 8.6E-41 1.9E-45 312.5 21.0 246 34-390 1-255 (316)
88 cd06650 PKc_MEK1 Catalytic dom 100.0 1.5E-40 3.3E-45 313.0 22.8 290 26-389 3-305 (333)
89 cd07861 STKc_CDK1_euk Catalyti 100.0 2.9E-40 6.3E-45 304.2 24.1 277 29-386 1-285 (285)
90 PHA03209 serine/threonine kina 100.0 1.1E-40 2.3E-45 317.0 21.7 285 27-389 65-357 (357)
91 cd07839 STKc_CDK5 Catalytic do 100.0 4.5E-40 9.7E-45 302.9 25.1 277 29-386 1-284 (284)
92 cd05601 STKc_CRIK Catalytic do 100.0 3E-41 6.5E-46 317.7 17.4 254 28-389 1-269 (330)
93 PHA03211 serine/threonine kina 100.0 2.7E-40 5.9E-45 321.3 24.5 296 15-388 155-460 (461)
94 cd05627 STKc_NDR2 Catalytic do 100.0 5.6E-41 1.2E-45 319.5 19.1 251 28-389 1-299 (360)
95 KOG0611|consensus 100.0 7.2E-42 1.6E-46 306.9 11.7 253 22-387 47-307 (668)
96 cd05618 STKc_aPKC_iota Catalyt 100.0 1.9E-40 4.1E-45 311.9 21.8 252 34-389 1-268 (329)
97 cd05591 STKc_nPKC_epsilon Cata 100.0 1.5E-40 3.2E-45 311.7 20.4 245 34-389 1-260 (321)
98 cd05608 STKc_GRK1 Catalytic do 100.0 1.5E-40 3.3E-45 305.6 20.0 248 36-389 1-263 (280)
99 cd05594 STKc_PKB_alpha Catalyt 100.0 7.4E-41 1.6E-45 314.3 18.2 244 34-389 1-258 (325)
100 cd05592 STKc_nPKC_theta_delta 100.0 2.3E-40 4.9E-45 309.7 21.3 245 34-389 1-254 (316)
101 KOG0197|consensus 100.0 2.7E-41 5.8E-46 315.0 14.6 243 29-381 207-455 (468)
102 cd05619 STKc_nPKC_theta Cataly 100.0 3.2E-40 6.8E-45 308.6 21.4 245 34-389 1-254 (316)
103 cd05584 STKc_p70S6K Catalytic 100.0 2.3E-40 5.1E-45 310.6 20.5 244 34-389 2-262 (323)
104 cd05570 STKc_PKC Catalytic dom 100.0 2.7E-40 5.8E-45 309.5 20.8 245 34-389 1-258 (318)
105 cd05630 STKc_GRK6 Catalytic do 100.0 5E-40 1.1E-44 302.9 21.6 255 29-389 1-267 (285)
106 cd05597 STKc_DMPK_like Catalyt 100.0 6.1E-40 1.3E-44 308.7 22.4 256 28-389 1-272 (331)
107 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.9E-40 1.5E-44 307.9 22.4 252 34-389 1-266 (327)
108 cd05615 STKc_cPKC_alpha Cataly 100.0 9.5E-40 2.1E-44 306.4 23.0 250 29-389 1-263 (323)
109 cd05622 STKc_ROCK1 Catalytic d 100.0 4.1E-40 8.9E-45 314.3 20.9 255 25-389 40-310 (371)
110 PHA03210 serine/threonine kina 100.0 1.3E-40 2.8E-45 328.9 17.9 298 17-389 137-460 (501)
111 PF00069 Pkinase: Protein kina 100.0 1.1E-39 2.5E-44 295.9 22.6 252 30-386 1-260 (260)
112 KOG0589|consensus 100.0 8E-41 1.7E-45 310.8 14.7 252 28-387 4-262 (426)
113 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-39 4.9E-44 302.1 24.6 282 28-388 7-295 (309)
114 PLN00034 mitogen-activated pro 100.0 2.8E-40 6.1E-45 313.9 18.7 251 28-390 74-335 (353)
115 cd07832 STKc_CCRK Catalytic do 100.0 2.1E-39 4.5E-44 298.6 23.4 278 29-387 1-286 (286)
116 cd07844 STKc_PCTAIRE_like Cata 100.0 3.7E-39 8E-44 297.9 25.0 281 28-386 5-291 (291)
117 cd07855 STKc_ERK5 Catalytic do 100.0 1E-39 2.2E-44 307.7 21.6 287 27-391 4-302 (334)
118 cd07841 STKc_CDK7 Catalytic do 100.0 4.4E-39 9.5E-44 298.4 25.4 279 29-390 1-289 (298)
119 KOG1989|consensus 100.0 7.8E-40 1.7E-44 320.9 21.0 247 28-383 37-307 (738)
120 cd05575 STKc_SGK Catalytic dom 100.0 2.6E-40 5.7E-45 310.3 16.9 244 34-389 1-257 (323)
121 cd05632 STKc_GRK5 Catalytic do 100.0 2.9E-39 6.3E-44 297.9 23.5 255 29-389 1-267 (285)
122 PLN00009 cyclin-dependent kina 100.0 3.7E-39 8E-44 298.4 24.2 283 28-390 2-291 (294)
123 cd07849 STKc_ERK1_2_like Catal 100.0 2.3E-39 4.9E-44 305.6 23.2 287 26-390 3-299 (336)
124 PTZ00283 serine/threonine prot 100.0 2.2E-39 4.8E-44 319.4 23.6 259 26-389 30-303 (496)
125 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.3E-38 2.9E-43 293.2 27.3 279 28-386 1-286 (286)
126 cd05607 STKc_GRK7 Catalytic do 100.0 2.1E-39 4.6E-44 297.6 21.6 249 36-389 1-260 (277)
127 PTZ00266 NIMA-related protein 100.0 2.8E-39 6.1E-44 329.6 24.3 281 21-390 6-302 (1021)
128 cd07860 STKc_CDK2_3 Catalytic 100.0 6.1E-39 1.3E-43 295.4 24.4 277 29-386 1-284 (284)
129 cd07837 STKc_CdkB_plant Cataly 100.0 9E-39 2E-43 295.8 25.6 283 28-387 1-295 (295)
130 cd05574 STKc_phototropin_like 100.0 5.7E-39 1.2E-43 300.2 24.5 254 28-389 1-295 (316)
131 cd05582 STKc_RSK_N N-terminal 100.0 3.7E-40 8.1E-45 308.6 16.4 244 34-389 2-260 (318)
132 cd07865 STKc_CDK9 Catalytic do 100.0 6.3E-39 1.4E-43 298.8 24.6 283 29-386 13-310 (310)
133 cd07842 STKc_CDK8_like Catalyt 100.0 1.1E-38 2.3E-43 298.2 26.0 297 29-386 1-316 (316)
134 cd08227 PK_STRAD_alpha Pseudok 100.0 9.8E-40 2.1E-44 306.9 18.7 288 32-390 2-314 (327)
135 KOG4279|consensus 100.0 2.8E-40 6E-45 313.6 14.9 259 24-389 566-838 (1226)
136 cd06619 PKc_MKK5 Catalytic dom 100.0 2.3E-39 5.1E-44 297.5 20.8 258 28-391 1-261 (279)
137 cd06637 STKc_TNIK Catalytic do 100.0 2.8E-39 6E-44 295.6 21.1 256 28-386 6-272 (272)
138 cd05623 STKc_MRCK_alpha Cataly 100.0 2.3E-39 4.9E-44 305.1 21.0 256 28-389 1-272 (332)
139 cd06655 STKc_PAK2 Catalytic do 100.0 6.8E-39 1.5E-43 297.0 23.8 255 28-392 19-278 (296)
140 cd06656 STKc_PAK3 Catalytic do 100.0 3.1E-39 6.8E-44 299.4 21.5 257 27-393 18-279 (297)
141 cd05580 STKc_PKA Catalytic dom 100.0 6.5E-39 1.4E-43 296.3 23.4 251 28-390 1-261 (290)
142 PTZ00267 NIMA-related protein 100.0 3.9E-39 8.6E-44 317.2 23.3 253 27-388 66-328 (478)
143 cd06644 STKc_STK10_LOK Catalyt 100.0 2.4E-39 5.1E-44 299.4 20.5 259 25-391 9-277 (292)
144 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.1E-38 2.4E-43 294.7 25.0 281 28-386 5-291 (291)
145 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.1E-39 1.1E-43 303.3 23.0 286 26-390 3-298 (337)
146 cd07833 STKc_CDKL Catalytic do 100.0 8.6E-39 1.9E-43 294.8 23.9 280 28-386 1-288 (288)
147 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.8E-39 8.3E-44 296.5 21.4 257 27-386 15-282 (282)
148 cd07843 STKc_CDC2L1 Catalytic 100.0 5.3E-39 1.2E-43 297.2 22.4 281 28-386 5-293 (293)
149 cd05624 STKc_MRCK_beta Catalyt 100.0 2.5E-39 5.4E-44 304.6 20.4 256 28-389 1-272 (331)
150 cd07880 STKc_p38gamma_MAPK12 C 100.0 7E-39 1.5E-43 303.0 23.4 287 26-390 13-305 (343)
151 cd06654 STKc_PAK1 Catalytic do 100.0 9E-39 2E-43 296.2 23.6 260 21-391 14-278 (296)
152 cd07851 STKc_p38 Catalytic dom 100.0 1.3E-38 2.9E-43 301.2 24.4 289 25-391 12-306 (343)
153 cd05604 STKc_SGK3 Catalytic do 100.0 6.9E-40 1.5E-44 307.7 15.5 244 34-389 1-257 (325)
154 cd06625 STKc_MEKK3_like Cataly 100.0 8E-39 1.7E-43 291.1 22.0 249 28-386 2-263 (263)
155 cd06615 PKc_MEK Catalytic doma 100.0 8.1E-39 1.8E-43 298.2 22.4 283 28-389 1-293 (308)
156 cd08223 STKc_Nek4 Catalytic do 100.0 2.7E-38 5.8E-43 286.6 25.1 250 29-386 1-257 (257)
157 cd08529 STKc_FA2-like Catalyti 100.0 2.1E-38 4.7E-43 287.0 24.1 249 29-386 1-256 (256)
158 cd05586 STKc_Sck1_like Catalyt 100.0 1.3E-39 2.8E-44 306.5 16.6 245 36-389 1-259 (330)
159 cd07831 STKc_MOK Catalytic dom 100.0 2E-38 4.2E-43 291.5 24.0 277 30-386 1-282 (282)
160 cd07879 STKc_p38delta_MAPK13 C 100.0 2.6E-38 5.5E-43 299.1 25.2 286 26-391 13-305 (342)
161 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.5E-39 1.4E-43 295.5 20.6 258 28-390 1-269 (286)
162 cd05602 STKc_SGK1 Catalytic do 100.0 4.4E-39 9.4E-44 302.3 19.7 244 34-389 1-257 (325)
163 cd07835 STKc_CDK1_like Catalyt 100.0 1.5E-38 3.3E-43 292.5 22.8 276 30-386 1-283 (283)
164 cd05603 STKc_SGK2 Catalytic do 100.0 3.8E-39 8.2E-44 302.2 19.0 244 34-389 1-257 (321)
165 cd05102 PTKc_VEGFR3 Catalytic 100.0 7.8E-39 1.7E-43 302.2 20.9 250 27-382 6-329 (338)
166 cd06609 STKc_MST3_like Catalyt 100.0 9.2E-39 2E-43 292.7 20.6 253 28-392 1-260 (274)
167 KOG0986|consensus 100.0 3.2E-40 7E-45 300.1 10.6 256 28-389 185-452 (591)
168 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.3E-38 5E-43 299.4 23.7 284 27-388 4-305 (342)
169 KOG2345|consensus 100.0 2.5E-39 5.5E-44 273.5 15.0 255 27-383 20-296 (302)
170 cd07834 STKc_MAPK Catalytic do 100.0 1.2E-38 2.5E-43 300.0 21.3 283 29-390 1-296 (330)
171 cd07836 STKc_Pho85 Catalytic d 100.0 4.6E-38 1E-42 289.4 24.8 277 29-386 1-284 (284)
172 cd07877 STKc_p38alpha_MAPK14 C 100.0 6.1E-38 1.3E-42 296.8 25.8 282 26-390 15-307 (345)
173 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.7E-38 5.8E-43 288.0 22.3 255 28-386 1-267 (267)
174 cd06608 STKc_myosinIII_like Ca 100.0 3.1E-38 6.7E-43 288.8 22.8 257 28-386 6-275 (275)
175 cd07866 STKc_BUR1 Catalytic do 100.0 7E-38 1.5E-42 291.9 25.5 283 27-386 7-311 (311)
176 cd06643 STKc_SLK Catalytic dom 100.0 1.7E-38 3.7E-43 292.2 20.9 255 29-391 6-270 (282)
177 KOG0574|consensus 100.0 1.9E-41 4.1E-46 293.7 1.1 253 28-389 33-289 (502)
178 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.3E-38 7.1E-43 290.7 22.7 279 28-386 1-286 (286)
179 KOG0669|consensus 100.0 1.1E-40 2.3E-45 282.4 5.4 289 28-388 17-320 (376)
180 PTZ00024 cyclin-dependent prot 100.0 2.7E-38 5.9E-43 298.1 22.4 280 26-389 6-319 (335)
181 cd06617 PKc_MKK3_6 Catalytic d 100.0 3E-38 6.5E-43 290.5 21.9 256 28-390 1-268 (283)
182 cd07857 STKc_MPK1 Catalytic do 100.0 4.6E-38 1E-42 296.2 23.6 285 29-390 1-299 (332)
183 cd07864 STKc_CDK12 Catalytic d 100.0 6E-38 1.3E-42 291.3 24.0 286 24-386 3-302 (302)
184 cd08218 STKc_Nek1 Catalytic do 100.0 5.3E-38 1.1E-42 284.6 23.1 249 29-386 1-256 (256)
185 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 8.5E-38 1.8E-42 293.7 25.2 282 26-390 8-295 (328)
186 cd06639 STKc_myosinIIIB Cataly 100.0 8.8E-38 1.9E-42 288.8 24.7 260 26-387 20-291 (291)
187 cd06611 STKc_SLK_like Catalyti 100.0 8.1E-39 1.8E-43 294.0 17.6 256 28-391 5-270 (280)
188 cd06631 STKc_YSK4 Catalytic do 100.0 5.2E-38 1.1E-42 286.2 22.4 248 29-386 1-265 (265)
189 cd08220 STKc_Nek8 Catalytic do 100.0 7.4E-38 1.6E-42 283.5 23.1 250 29-386 1-256 (256)
190 cd06638 STKc_myosinIIIA Cataly 100.0 6.1E-38 1.3E-42 289.0 22.9 258 27-386 17-286 (286)
191 KOG0607|consensus 100.0 5.4E-39 1.2E-43 280.5 14.8 270 26-391 75-369 (463)
192 KOG0612|consensus 100.0 1.1E-39 2.4E-44 324.4 11.4 252 27-389 74-344 (1317)
193 KOG0690|consensus 100.0 5.1E-40 1.1E-44 287.6 7.9 250 28-389 168-430 (516)
194 cd07840 STKc_CDK9_like Catalyt 100.0 8.8E-38 1.9E-42 287.7 23.2 279 30-386 1-287 (287)
195 PHA02988 hypothetical protein; 100.0 7.5E-38 1.6E-42 288.1 22.6 243 34-383 26-275 (283)
196 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.9E-38 1.3E-42 286.1 21.7 247 29-386 1-267 (267)
197 cd05118 STKc_CMGC Catalytic do 100.0 8.5E-38 1.8E-42 287.3 23.0 276 30-386 1-283 (283)
198 cd06630 STKc_MEKK1 Catalytic d 100.0 1E-37 2.2E-42 284.5 23.3 253 29-387 1-268 (268)
199 cd06612 STKc_MST1_2 Catalytic 100.0 4.3E-38 9.3E-43 285.0 20.5 250 28-386 3-256 (256)
200 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.3E-37 5E-42 285.4 25.7 268 28-391 1-274 (287)
201 cd07838 STKc_CDK4_6_like Catal 100.0 2.5E-37 5.4E-42 284.8 25.8 281 30-386 1-287 (287)
202 cd06613 STKc_MAP4K3_like Catal 100.0 1.7E-37 3.7E-42 282.0 24.1 253 27-385 2-262 (262)
203 cd07830 STKc_MAK_like Catalyti 100.0 8.3E-38 1.8E-42 287.6 21.9 277 30-386 1-283 (283)
204 cd08221 STKc_Nek9 Catalytic do 100.0 1.7E-37 3.6E-42 281.3 23.6 249 29-386 1-256 (256)
205 cd06658 STKc_PAK5 Catalytic do 100.0 2.8E-38 6E-43 292.4 18.7 253 27-389 21-278 (292)
206 cd06652 STKc_MEKK2 Catalytic d 100.0 2.5E-37 5.4E-42 281.8 24.4 251 28-387 2-265 (265)
207 KOG0579|consensus 100.0 1.2E-39 2.6E-44 306.6 9.2 258 27-391 31-297 (1187)
208 PHA03390 pk1 serine/threonine- 100.0 1E-37 2.2E-42 284.8 21.9 250 28-388 14-267 (267)
209 cd05609 STKc_MAST Catalytic do 100.0 1.8E-37 3.8E-42 288.8 23.0 254 28-390 1-280 (305)
210 cd06646 STKc_MAP4K5 Catalytic 100.0 4.9E-38 1.1E-42 286.7 18.9 252 27-385 8-267 (267)
211 cd06651 STKc_MEKK3 Catalytic d 100.0 1.5E-37 3.2E-42 283.5 21.9 250 29-387 3-265 (266)
212 cd07829 STKc_CDK_like Catalyti 100.0 2.5E-37 5.4E-42 284.1 23.5 275 30-386 1-282 (282)
213 cd06605 PKc_MAPKK Catalytic do 100.0 4.6E-38 9.9E-43 286.4 18.5 256 28-388 1-262 (265)
214 cd06645 STKc_MAP4K3 Catalytic 100.0 3.3E-38 7.1E-43 287.8 17.3 251 28-385 9-267 (267)
215 cd05578 STKc_Yank1 Catalytic d 100.0 1.4E-37 3.1E-42 282.2 21.4 249 29-386 1-258 (258)
216 cd08225 STKc_Nek5 Catalytic do 100.0 2.3E-37 5E-42 280.4 22.6 250 29-386 1-257 (257)
217 cd05577 STKc_GRK Catalytic dom 100.0 1.2E-37 2.6E-42 285.9 19.9 248 36-389 1-260 (277)
218 cd05633 STKc_GRK3 Catalytic do 100.0 3.5E-37 7.6E-42 283.1 22.7 249 35-389 1-261 (279)
219 cd05052 PTKc_Abl Catalytic dom 100.0 3.8E-37 8.2E-42 280.3 22.6 247 28-383 6-258 (263)
220 cd05096 PTKc_DDR1 Catalytic do 100.0 3E-37 6.5E-42 287.1 22.2 254 27-382 4-300 (304)
221 cd06640 STKc_MST4 Catalytic do 100.0 2.2E-37 4.7E-42 284.1 20.9 251 28-390 4-260 (277)
222 cd06616 PKc_MKK4 Catalytic dom 100.0 8.9E-38 1.9E-42 288.2 18.4 260 28-390 4-274 (288)
223 cd06647 STKc_PAK_I Catalytic d 100.0 1.4E-37 3.1E-42 287.7 19.8 258 22-390 14-276 (293)
224 cd08219 STKc_Nek3 Catalytic do 100.0 3.1E-37 6.8E-42 279.4 21.6 246 29-383 1-252 (255)
225 cd06648 STKc_PAK_II Catalytic 100.0 4E-37 8.7E-42 283.6 22.6 254 28-391 19-277 (285)
226 cd08217 STKc_Nek2 Catalytic do 100.0 5.3E-37 1.1E-41 278.9 23.1 251 29-386 1-265 (265)
227 cd05072 PTKc_Lyn Catalytic dom 100.0 2.7E-37 5.9E-42 280.8 21.1 245 28-382 6-256 (261)
228 cd08226 PK_STRAD_beta Pseudoki 100.0 5.9E-38 1.3E-42 295.0 17.2 288 34-390 4-315 (328)
229 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.8E-37 8.3E-42 281.6 22.0 252 29-386 2-272 (272)
230 cd06659 STKc_PAK6 Catalytic do 100.0 2.1E-37 4.5E-42 287.2 19.9 252 29-390 22-278 (297)
231 cd07852 STKc_MAPK15 Catalytic 100.0 1.4E-37 3E-42 293.5 19.1 289 24-391 3-303 (337)
232 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.4E-37 7.3E-42 281.2 21.0 245 28-382 5-260 (266)
233 KOG4236|consensus 100.0 8.5E-39 1.8E-43 295.3 10.2 256 28-388 562-824 (888)
234 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.1E-37 4.5E-42 285.3 19.4 260 28-388 5-271 (284)
235 KOG0586|consensus 100.0 8E-38 1.7E-42 295.1 16.5 251 28-390 56-313 (596)
236 cd06626 STKc_MEKK4 Catalytic d 100.0 1E-36 2.2E-41 277.3 23.3 250 29-386 1-264 (264)
237 cd05106 PTKc_CSF-1R Catalytic 100.0 2.5E-37 5.5E-42 295.4 20.2 250 27-383 37-368 (374)
238 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.9E-38 8.4E-43 289.1 13.9 252 28-391 4-261 (277)
239 cd05606 STKc_beta_ARK Catalyti 100.0 8.5E-37 1.9E-41 280.4 22.8 250 35-390 1-262 (278)
240 cd05581 STKc_PDK1 Catalytic do 100.0 6.1E-37 1.3E-41 281.1 21.6 248 28-386 1-280 (280)
241 cd06607 STKc_TAO Catalytic dom 100.0 4.7E-37 1E-41 286.2 20.9 256 25-390 12-274 (307)
242 cd06624 STKc_ASK Catalytic dom 100.0 9.8E-37 2.1E-41 278.3 22.4 248 32-386 12-268 (268)
243 cd08216 PK_STRAD Pseudokinase 100.0 1.2E-36 2.7E-41 284.2 23.2 276 40-391 12-303 (314)
244 cd05067 PTKc_Lck_Blk Catalytic 100.0 8.2E-37 1.8E-41 277.6 21.4 246 26-382 4-255 (260)
245 cd06632 STKc_MEKK1_plant Catal 100.0 1.2E-36 2.7E-41 275.7 22.4 248 29-386 1-258 (258)
246 KOG0596|consensus 100.0 1.2E-37 2.5E-42 289.7 15.5 253 27-388 360-632 (677)
247 KOG0577|consensus 100.0 5E-38 1.1E-42 293.7 13.1 250 29-388 27-283 (948)
248 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-36 2.9E-41 275.5 22.0 244 28-382 4-253 (256)
249 cd05572 STKc_cGK_PKG Catalytic 100.0 7.4E-37 1.6E-41 278.1 20.3 246 36-389 1-258 (262)
250 cd05104 PTKc_Kit Catalytic dom 100.0 8.1E-37 1.8E-41 292.1 21.4 250 27-383 34-370 (375)
251 cd08228 STKc_Nek6 Catalytic do 100.0 1.9E-36 4E-41 276.2 22.4 250 28-383 2-261 (267)
252 cd08215 STKc_Nek Catalytic dom 100.0 2E-36 4.4E-41 273.8 22.3 249 29-386 1-258 (258)
253 cd06623 PKc_MAPKK_plant_like C 100.0 1.4E-36 2.9E-41 276.3 21.3 255 28-390 1-263 (264)
254 cd05071 PTKc_Src Catalytic dom 100.0 1.9E-36 4.1E-41 275.7 22.0 245 27-382 5-255 (262)
255 cd06917 STKc_NAK1_like Catalyt 100.0 7.1E-37 1.5E-41 280.5 19.3 253 29-390 2-262 (277)
256 cd05061 PTKc_InsR Catalytic do 100.0 1.9E-36 4.2E-41 279.4 22.3 255 27-390 5-287 (288)
257 cd05611 STKc_Rim15_like Cataly 100.0 1.5E-36 3.2E-41 275.9 20.9 249 34-390 2-258 (260)
258 cd06641 STKc_MST3 Catalytic do 100.0 1.3E-36 2.9E-41 278.9 20.8 250 29-390 5-260 (277)
259 cd05048 PTKc_Ror Catalytic Dom 100.0 8.1E-37 1.8E-41 281.1 19.4 247 28-383 5-279 (283)
260 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-36 3.2E-41 278.6 20.9 250 28-383 6-274 (277)
261 KOG0603|consensus 100.0 2.1E-37 4.6E-42 293.7 15.7 246 25-386 319-566 (612)
262 cd05049 PTKc_Trk Catalytic dom 100.0 8.3E-37 1.8E-41 280.5 19.3 246 28-382 5-276 (280)
263 cd05068 PTKc_Frk_like Catalyti 100.0 2.3E-36 5.1E-41 274.7 21.8 246 27-382 5-256 (261)
264 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.3E-36 5E-41 274.1 21.6 245 28-383 4-254 (256)
265 cd05054 PTKc_VEGFR Catalytic d 100.0 8.5E-37 1.8E-41 287.9 19.2 251 27-383 6-329 (337)
266 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.2E-36 4.8E-41 274.8 21.3 246 26-382 4-255 (260)
267 cd06606 STKc_MAPKKK Catalytic 100.0 4.4E-36 9.6E-41 271.6 23.1 251 29-386 1-260 (260)
268 KOG1187|consensus 100.0 2.1E-36 4.5E-41 284.3 21.3 263 28-382 75-347 (361)
269 cd05069 PTKc_Yes Catalytic dom 100.0 4.8E-36 1E-40 272.6 23.1 245 27-382 5-255 (260)
270 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.1E-36 2.4E-41 276.7 18.6 245 28-382 6-256 (261)
271 cd05579 STKc_MAST_like Catalyt 100.0 1.8E-36 3.8E-41 275.5 19.9 242 36-389 1-263 (265)
272 cd05034 PTKc_Src_like Catalyti 100.0 5.3E-36 1.2E-40 272.3 22.6 247 26-382 4-256 (261)
273 cd05082 PTKc_Csk Catalytic dom 100.0 4.3E-36 9.3E-41 272.2 21.8 245 28-383 6-252 (256)
274 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.9E-36 1.5E-40 272.2 23.2 250 28-386 2-264 (264)
275 cd08222 STKc_Nek11 Catalytic d 100.0 4.2E-36 9.1E-41 272.9 21.7 247 29-386 1-260 (260)
276 cd05122 PKc_STE Catalytic doma 100.0 9.1E-36 2E-40 268.4 23.8 249 29-385 1-253 (253)
277 cd05039 PTKc_Csk_like Catalyti 100.0 4.8E-36 1E-40 271.8 21.5 245 28-383 6-252 (256)
278 cd05059 PTKc_Tec_like Catalyti 100.0 2.5E-36 5.4E-41 273.8 19.6 244 29-383 5-254 (256)
279 cd05062 PTKc_IGF-1R Catalytic 100.0 3.5E-36 7.5E-41 276.1 20.7 249 26-383 4-274 (277)
280 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.5E-35 3.3E-40 270.0 24.7 248 28-382 2-260 (267)
281 cd06633 STKc_TAO3 Catalytic do 100.0 7.9E-36 1.7E-40 278.7 23.3 252 29-390 22-280 (313)
282 cd06657 STKc_PAK4 Catalytic do 100.0 3.8E-36 8.2E-41 278.0 20.9 252 29-390 21-277 (292)
283 cd06618 PKc_MKK7 Catalytic dom 100.0 3.9E-36 8.6E-41 278.5 21.1 258 28-390 15-280 (296)
284 cd06627 STKc_Cdc7_like Catalyt 100.0 9E-36 1.9E-40 269.2 22.4 247 29-386 1-254 (254)
285 cd05055 PTKc_PDGFR Catalytic d 100.0 9.3E-36 2E-40 276.8 23.0 253 24-383 31-297 (302)
286 KOG0665|consensus 100.0 2.2E-37 4.7E-42 270.8 10.9 293 25-390 14-316 (369)
287 cd06614 STKc_PAK Catalytic dom 100.0 5E-36 1.1E-40 276.3 20.8 256 26-389 17-276 (286)
288 KOG0668|consensus 100.0 9.3E-38 2E-42 261.1 8.0 300 11-390 23-329 (338)
289 cd05093 PTKc_TrkB Catalytic do 100.0 5.6E-36 1.2E-40 276.3 20.8 246 28-382 5-274 (288)
290 cd05090 PTKc_Ror1 Catalytic do 100.0 6.6E-36 1.4E-40 275.1 21.1 247 28-383 5-279 (283)
291 PHA02882 putative serine/threo 100.0 1E-35 2.2E-40 275.4 22.5 272 21-382 5-291 (294)
292 KOG1026|consensus 100.0 4.2E-37 9E-42 300.5 13.7 244 29-381 487-756 (774)
293 cd06635 STKc_TAO1 Catalytic do 100.0 1.3E-35 2.9E-40 277.6 23.2 254 27-390 24-284 (317)
294 cd06634 STKc_TAO2 Catalytic do 100.0 5.6E-36 1.2E-40 279.0 20.3 255 27-391 14-275 (308)
295 cd08229 STKc_Nek7 Catalytic do 100.0 6.6E-36 1.4E-40 272.6 20.3 249 28-382 2-260 (267)
296 cd05613 STKc_MSK1_N N-terminal 100.0 1.2E-35 2.6E-40 274.4 22.0 255 29-390 1-275 (290)
297 PRK13184 pknD serine/threonine 100.0 7.2E-36 1.6E-40 303.5 22.3 199 28-288 2-235 (932)
298 cd05089 PTKc_Tie1 Catalytic do 100.0 8.2E-36 1.8E-40 276.5 20.9 248 28-383 2-271 (297)
299 cd05108 PTKc_EGFR Catalytic do 100.0 4.5E-36 9.8E-41 280.7 19.2 245 28-383 7-264 (316)
300 cd05088 PTKc_Tie2 Catalytic do 100.0 6.6E-36 1.4E-40 277.9 20.0 247 29-383 8-276 (303)
301 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.1E-35 2.4E-40 285.6 22.1 250 27-383 36-393 (400)
302 KOG0983|consensus 100.0 3.5E-37 7.6E-42 263.9 10.3 271 13-388 74-354 (391)
303 cd05032 PTKc_InsR_like Catalyt 100.0 1.2E-35 2.5E-40 272.4 21.1 248 27-383 5-274 (277)
304 cd00192 PTKc Catalytic domain 100.0 1.7E-35 3.8E-40 268.4 21.9 241 34-383 1-260 (262)
305 cd05073 PTKc_Hck Catalytic dom 100.0 1.8E-35 4E-40 268.8 21.9 246 26-382 4-255 (260)
306 cd08530 STKc_CNK2-like Catalyt 100.0 3.5E-35 7.7E-40 265.8 23.7 249 29-386 1-256 (256)
307 cd05033 PTKc_EphR Catalytic do 100.0 1.3E-35 2.7E-40 270.7 20.8 246 28-383 4-261 (266)
308 PF07714 Pkinase_Tyr: Protein 100.0 6.6E-36 1.4E-40 271.6 18.7 243 31-382 2-257 (259)
309 cd05583 STKc_MSK_N N-terminal 100.0 1.4E-35 3.1E-40 273.6 21.2 255 29-390 1-273 (288)
310 cd05084 PTKc_Fes Catalytic dom 100.0 7.8E-36 1.7E-40 269.8 19.0 239 34-382 1-248 (252)
311 cd05053 PTKc_FGFR Catalytic do 100.0 1.3E-35 2.8E-40 274.5 20.9 249 27-383 11-287 (293)
312 cd05094 PTKc_TrkC Catalytic do 100.0 2.4E-35 5.1E-40 272.6 21.4 247 28-383 5-278 (291)
313 cd05083 PTKc_Chk Catalytic dom 100.0 1.6E-35 3.6E-40 268.1 19.9 243 28-383 6-250 (254)
314 cd05109 PTKc_HER2 Catalytic do 100.0 2.1E-35 4.6E-40 271.2 20.8 246 27-383 6-264 (279)
315 cd05092 PTKc_TrkA Catalytic do 100.0 1.5E-35 3.3E-40 272.4 19.8 246 28-382 5-276 (280)
316 cd05576 STKc_RPK118_like Catal 100.0 9.1E-36 2E-40 267.1 17.8 228 39-386 4-237 (237)
317 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.3E-35 4.9E-40 274.9 21.1 249 27-383 17-295 (307)
318 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.8E-35 3.8E-40 272.3 20.0 260 27-382 2-276 (283)
319 cd05123 STKc_AGC Catalytic dom 100.0 4.1E-35 8.9E-40 264.5 21.9 239 36-386 1-250 (250)
320 cd05035 PTKc_Axl_like Catalyti 100.0 2.3E-35 5.1E-40 269.6 20.5 249 30-383 1-268 (273)
321 cd05610 STKc_MASTL Catalytic d 100.0 3.3E-35 7.1E-40 299.3 23.7 133 28-181 4-141 (669)
322 cd05075 PTKc_Axl Catalytic dom 100.0 1.8E-35 4E-40 270.4 19.7 248 31-383 2-267 (272)
323 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-35 3.1E-40 274.6 19.1 254 27-382 4-291 (295)
324 cd05116 PTKc_Syk Catalytic dom 100.0 2.9E-35 6.3E-40 267.0 20.8 237 35-383 2-251 (257)
325 cd05051 PTKc_DDR Catalytic dom 100.0 2.5E-35 5.5E-40 272.9 20.6 254 28-383 5-293 (296)
326 cd05112 PTKc_Itk Catalytic dom 100.0 4.4E-35 9.5E-40 265.5 21.6 245 28-383 4-254 (256)
327 smart00219 TyrKc Tyrosine kina 100.0 3.7E-35 8.1E-40 265.8 21.2 244 30-382 1-256 (258)
328 KOG4721|consensus 100.0 1E-36 2.3E-41 283.8 10.8 233 33-383 129-364 (904)
329 KOG4645|consensus 100.0 2.2E-37 4.7E-42 311.8 6.6 255 27-391 1234-1502(1509)
330 KOG0584|consensus 100.0 2.2E-36 4.8E-41 285.8 12.8 254 27-388 38-301 (632)
331 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.5E-35 1.2E-39 273.1 22.1 248 27-382 11-288 (314)
332 cd05091 PTKc_Ror2 Catalytic do 100.0 1.2E-35 2.6E-40 273.4 17.4 247 28-383 5-279 (283)
333 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.3E-35 7.3E-40 277.9 20.7 251 27-383 6-335 (343)
334 cd05095 PTKc_DDR2 Catalytic do 100.0 2.7E-35 5.9E-40 272.9 19.6 254 27-382 4-292 (296)
335 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.2E-35 9.1E-40 267.5 20.4 246 28-383 5-263 (268)
336 KOG1167|consensus 100.0 1.4E-36 3.1E-41 274.9 10.5 328 26-391 34-389 (418)
337 cd05060 PTKc_Syk_like Catalyti 100.0 4.6E-35 9.9E-40 265.6 20.5 238 34-383 1-251 (257)
338 cd05045 PTKc_RET Catalytic dom 100.0 4.3E-35 9.3E-40 270.7 20.3 246 29-383 1-282 (290)
339 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.8E-35 1.3E-39 280.5 21.8 250 27-383 36-395 (401)
340 cd05111 PTK_HER3 Pseudokinase 100.0 5.8E-35 1.3E-39 268.4 20.9 245 28-383 7-264 (279)
341 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.5E-35 1.4E-39 271.4 21.2 251 25-383 12-292 (304)
342 cd05065 PTKc_EphR_B Catalytic 100.0 6.1E-35 1.3E-39 266.6 20.3 245 29-383 5-264 (269)
343 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.9E-35 1.1E-39 266.4 19.3 244 34-383 1-260 (262)
344 PLN03225 Serine/threonine-prot 100.0 1.2E-34 2.7E-39 288.3 23.7 276 27-390 131-457 (566)
345 cd05040 PTKc_Ack_like Catalyti 100.0 1.2E-34 2.5E-39 262.8 21.5 240 34-382 1-253 (257)
346 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.6E-34 3.5E-39 266.0 22.7 261 28-383 4-279 (284)
347 cd05050 PTKc_Musk Catalytic do 100.0 7.7E-35 1.7E-39 268.7 20.6 246 28-382 5-284 (288)
348 cd05066 PTKc_EphR_A Catalytic 100.0 6.6E-35 1.4E-39 266.1 19.8 245 28-382 4-261 (267)
349 KOG0193|consensus 100.0 4.4E-36 9.5E-41 282.2 12.0 244 27-382 391-648 (678)
350 cd05056 PTKc_FAK Catalytic dom 100.0 9.9E-35 2.1E-39 265.4 20.8 246 27-383 5-261 (270)
351 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-34 2.5E-39 263.1 21.1 238 35-383 2-251 (257)
352 cd05100 PTKc_FGFR3 Catalytic d 100.0 9E-35 1.9E-39 274.1 21.1 249 27-383 11-289 (334)
353 KOG0664|consensus 100.0 3.7E-37 8E-42 263.9 4.1 287 33-393 58-353 (449)
354 KOG1035|consensus 100.0 7.1E-36 1.5E-40 299.5 13.8 255 28-387 479-875 (1351)
355 cd05043 PTK_Ryk Pseudokinase d 100.0 1.1E-34 2.3E-39 266.6 20.4 248 27-382 5-271 (280)
356 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 8.3E-35 1.8E-39 263.9 19.3 242 34-382 1-256 (259)
357 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.2E-34 2.5E-39 267.0 20.4 260 29-383 5-279 (284)
358 KOG1095|consensus 100.0 3.2E-35 6.9E-40 297.1 17.6 246 28-382 692-956 (1025)
359 KOG4250|consensus 100.0 1.4E-35 3.1E-40 283.7 14.2 275 28-375 13-296 (732)
360 KOG0696|consensus 100.0 1.4E-35 2.9E-40 267.1 13.0 252 27-389 348-612 (683)
361 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-34 3.4E-39 264.1 20.1 241 35-383 2-264 (270)
362 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.5E-35 1.8E-39 266.5 18.2 243 35-383 2-272 (274)
363 cd05085 PTKc_Fer Catalytic dom 100.0 2.9E-34 6.2E-39 259.2 21.4 239 34-383 1-247 (250)
364 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.8E-35 6.1E-40 267.3 14.6 245 34-383 1-256 (258)
365 KOG0587|consensus 100.0 7.8E-35 1.7E-39 283.7 18.5 260 27-388 18-287 (953)
366 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.5E-34 3.3E-39 265.8 19.6 261 28-383 4-279 (284)
367 cd05046 PTK_CCK4 Pseudokinase 100.0 2.4E-34 5.3E-39 263.5 20.6 248 28-383 5-272 (275)
368 cd05041 PTKc_Fes_like Catalyti 100.0 2.6E-34 5.7E-39 259.6 20.3 239 34-383 1-248 (251)
369 cd05057 PTKc_EGFR_like Catalyt 100.0 4.3E-34 9.2E-39 262.5 21.7 245 27-382 6-263 (279)
370 cd05044 PTKc_c-ros Catalytic d 100.0 2.1E-34 4.6E-39 262.9 19.0 244 35-382 2-265 (269)
371 KOG0608|consensus 100.0 8.6E-35 1.9E-39 273.9 15.2 260 22-390 623-935 (1034)
372 KOG0614|consensus 100.0 4.8E-36 1E-40 276.1 5.5 252 28-389 420-683 (732)
373 cd05110 PTKc_HER4 Catalytic do 100.0 6.7E-34 1.5E-38 264.4 20.0 245 28-383 7-264 (303)
374 cd08528 STKc_Nek10 Catalytic d 100.0 9.3E-34 2E-38 258.7 20.6 249 29-383 1-266 (269)
375 cd05042 PTKc_Aatyk Catalytic d 100.0 1.3E-33 2.8E-38 257.9 21.1 244 34-383 1-266 (269)
376 KOG0194|consensus 100.0 1.5E-34 3.3E-39 273.8 14.8 256 18-382 145-415 (474)
377 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.6E-33 3.4E-38 257.4 20.3 244 34-382 1-265 (269)
378 cd05058 PTKc_Met_Ron Catalytic 100.0 1.2E-33 2.7E-38 256.9 19.5 241 34-383 1-255 (262)
379 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.6E-33 3.5E-38 257.7 19.1 249 30-383 1-268 (273)
380 KOG4257|consensus 100.0 2.2E-34 4.7E-39 270.9 13.4 242 30-382 391-644 (974)
381 KOG4278|consensus 100.0 3.7E-34 8.1E-39 269.2 14.1 244 29-381 268-517 (1157)
382 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.5E-32 3.2E-37 250.9 21.1 243 35-382 2-264 (268)
383 KOG2052|consensus 100.0 5.6E-33 1.2E-37 252.7 16.9 266 14-380 197-496 (513)
384 KOG0199|consensus 100.0 9.4E-34 2E-38 269.6 12.3 246 28-383 110-368 (1039)
385 PLN03224 probable serine/threo 100.0 2.6E-32 5.7E-37 265.5 21.3 277 25-389 142-506 (507)
386 KOG0695|consensus 100.0 3.8E-33 8.3E-38 245.5 13.8 257 28-389 250-522 (593)
387 KOG0196|consensus 100.0 1.4E-33 3.1E-38 271.5 9.5 245 29-383 630-887 (996)
388 KOG1151|consensus 100.0 2.5E-34 5.3E-39 261.1 2.8 264 25-388 460-746 (775)
389 smart00220 S_TKc Serine/Threon 100.0 1.7E-31 3.8E-36 238.8 21.2 239 40-386 1-244 (244)
390 KOG1027|consensus 100.0 1.9E-33 4.2E-38 272.8 7.7 250 32-388 513-772 (903)
391 KOG1006|consensus 100.0 1.2E-33 2.6E-38 241.4 5.2 258 29-388 65-332 (361)
392 KOG1094|consensus 100.0 1.8E-32 3.9E-37 256.4 13.2 257 24-383 534-800 (807)
393 PLN00113 leucine-rich repeat r 100.0 4.5E-31 9.8E-36 281.8 20.1 253 29-383 691-947 (968)
394 KOG3653|consensus 100.0 6.8E-31 1.5E-35 240.8 15.8 197 28-286 210-426 (534)
395 KOG1345|consensus 100.0 2.9E-31 6.2E-36 227.5 6.1 256 26-386 22-290 (378)
396 KOG1152|consensus 100.0 1.7E-30 3.7E-35 242.9 11.6 196 29-285 562-770 (772)
397 KOG0200|consensus 100.0 2.4E-29 5.1E-34 252.8 19.5 248 28-382 296-574 (609)
398 KOG0984|consensus 100.0 5.7E-30 1.2E-34 211.4 9.6 201 28-288 46-256 (282)
399 KOG1025|consensus 100.0 9.5E-30 2.1E-34 246.3 11.6 266 7-383 673-953 (1177)
400 KOG0576|consensus 100.0 1.7E-30 3.7E-35 246.6 5.8 257 26-388 13-276 (829)
401 cd00180 PKc Catalytic domain o 100.0 1.1E-26 2.4E-31 202.7 21.2 207 36-384 1-215 (215)
402 KOG1024|consensus 100.0 4E-28 8.6E-33 217.8 11.0 248 27-382 283-550 (563)
403 PLN00181 protein SPA1-RELATED; 99.9 5.4E-28 1.2E-32 252.0 12.9 217 98-389 33-271 (793)
404 smart00221 STYKc Protein kinas 99.9 1.5E-25 3.3E-30 198.3 18.4 194 30-286 1-202 (225)
405 KOG1165|consensus 99.9 1.7E-25 3.7E-30 197.2 15.7 207 25-289 25-241 (449)
406 smart00750 KIND kinase non-cat 99.9 1.2E-25 2.6E-30 192.0 13.3 167 126-387 1-169 (176)
407 KOG1163|consensus 99.9 1.1E-24 2.5E-29 184.1 16.7 204 26-289 13-226 (341)
408 KOG1164|consensus 99.9 1.9E-23 4.1E-28 195.4 24.1 208 29-288 19-241 (322)
409 KOG0590|consensus 99.9 2.2E-25 4.7E-30 221.7 5.9 265 28-390 317-592 (601)
410 PF14531 Kinase-like: Kinase-l 99.9 1.1E-21 2.3E-26 176.2 15.9 245 29-374 13-288 (288)
411 KOG4158|consensus 99.9 3.4E-22 7.4E-27 180.4 10.8 258 28-378 157-505 (598)
412 COG0515 SPS1 Serine/threonine 99.9 2.4E-20 5.2E-25 173.7 23.2 259 30-389 2-281 (384)
413 PRK09188 serine/threonine prot 99.9 6.6E-22 1.4E-26 185.1 11.9 159 25-258 15-194 (365)
414 KOG0603|consensus 99.9 7.7E-23 1.7E-27 195.0 2.8 237 35-389 1-249 (612)
415 KOG0195|consensus 99.9 4.2E-22 9.1E-27 171.4 6.9 241 30-381 192-440 (448)
416 PRK10359 lipopolysaccharide co 99.8 2.5E-20 5.4E-25 162.6 10.7 176 24-279 27-217 (232)
417 KOG1240|consensus 99.8 8.5E-21 1.9E-25 190.0 8.7 243 29-383 24-291 (1431)
418 KOG0606|consensus 99.8 1.5E-20 3.3E-25 187.9 9.0 220 27-390 82-322 (1205)
419 cd05147 RIO1_euk RIO kinase fa 99.8 1.1E-19 2.4E-24 156.5 11.4 123 33-179 2-153 (190)
420 cd05145 RIO1_like RIO kinase f 99.8 2E-18 4.3E-23 149.1 13.3 124 33-181 2-154 (190)
421 KOG1166|consensus 99.8 6.1E-18 1.3E-22 172.3 15.6 201 25-282 695-901 (974)
422 PRK12274 serine/threonine prot 99.7 6.2E-17 1.3E-21 138.4 13.9 182 31-288 5-211 (218)
423 PRK10345 hypothetical protein; 99.7 8E-17 1.7E-21 140.1 14.0 129 33-180 7-141 (210)
424 KOG1033|consensus 99.7 5.9E-18 1.3E-22 158.8 7.1 175 115-386 329-515 (516)
425 smart00090 RIO RIO-like kinase 99.7 5.4E-17 1.2E-21 144.5 10.8 127 29-178 29-183 (237)
426 KOG1023|consensus 99.7 2.5E-16 5.3E-21 150.5 11.8 201 96-382 5-219 (484)
427 cd05144 RIO2_C RIO kinase fami 99.6 6.3E-16 1.4E-20 134.5 9.5 122 30-181 17-162 (198)
428 PRK14879 serine/threonine prot 99.6 6E-15 1.3E-19 129.6 12.6 118 34-178 2-129 (211)
429 TIGR03724 arch_bud32 Kae1-asso 99.6 1.9E-14 4.1E-19 125.2 13.3 114 35-178 1-124 (199)
430 KOG0590|consensus 99.6 2.1E-16 4.6E-21 157.6 -0.8 259 27-388 19-291 (601)
431 cd05119 RIO RIO kinase family, 99.6 1.9E-14 4.2E-19 123.9 11.4 122 33-181 2-151 (187)
432 PRK09605 bifunctional UGMP fam 99.5 3.2E-14 6.9E-19 142.2 12.2 121 27-178 332-462 (535)
433 PRK01723 3-deoxy-D-manno-octul 99.4 1.4E-12 3.1E-17 116.4 13.7 125 35-181 38-179 (239)
434 cd05120 APH_ChoK_like Aminogly 99.4 1E-12 2.2E-17 108.5 11.6 123 32-181 2-126 (155)
435 KOG0601|consensus 99.4 3.1E-13 6.7E-18 129.6 7.6 258 21-388 107-384 (524)
436 KOG1243|consensus 99.3 1.8E-11 3.8E-16 118.8 14.7 181 30-281 15-200 (690)
437 cd05146 RIO3_euk RIO kinase fa 99.2 6.2E-11 1.3E-15 101.4 11.3 124 34-180 3-161 (197)
438 KOG0601|consensus 99.2 1.7E-11 3.7E-16 117.7 6.9 254 25-391 262-522 (524)
439 KOG0606|consensus 99.2 6.1E-12 1.3E-16 127.1 2.5 281 28-389 804-1098(1205)
440 cd05151 ChoK Choline Kinase (C 99.2 1.6E-10 3.4E-15 97.7 9.4 115 33-178 3-122 (170)
441 PRK04750 ubiB putative ubiquin 99.1 6.6E-11 1.4E-15 116.3 7.2 137 29-181 121-297 (537)
442 KOG1266|consensus 99.1 1E-10 2.2E-15 104.3 6.4 200 96-390 125-338 (458)
443 TIGR01982 UbiB 2-polyprenylphe 99.1 4.8E-10 1E-14 108.8 10.9 136 34-181 123-294 (437)
444 KOG3087|consensus 99.0 5.2E-09 1.1E-13 86.5 11.7 130 32-182 11-151 (229)
445 PF01163 RIO1: RIO1 family; I 98.9 1.3E-08 2.7E-13 86.9 9.3 114 43-181 1-144 (188)
446 KOG3741|consensus 98.8 3.6E-07 7.9E-12 86.8 18.2 169 41-281 289-473 (655)
447 COG3642 Mn2+-dependent serine/ 98.8 3.5E-08 7.6E-13 82.0 10.1 118 34-181 2-129 (204)
448 KOG2137|consensus 98.8 1.7E-09 3.6E-14 105.7 1.6 152 151-389 107-271 (700)
449 cd05154 ACAD10_11_like Acyl-Co 98.7 9.8E-08 2.1E-12 84.1 11.4 111 34-161 4-117 (223)
450 COG1718 RIO1 Serine/threonine 98.7 2.8E-07 6.2E-12 80.4 11.2 126 33-180 53-203 (268)
451 PRK15123 lipopolysaccharide co 98.6 1.1E-06 2.3E-11 79.6 15.1 121 44-179 38-173 (268)
452 COG0478 RIO-like serine/threon 98.5 6.1E-07 1.3E-11 79.2 9.7 125 30-182 93-240 (304)
453 PRK09902 hypothetical protein; 98.5 4.6E-06 1E-10 71.8 14.3 130 37-181 27-165 (216)
454 COG4248 Uncharacterized protei 98.3 2.9E-06 6.4E-11 78.9 9.7 191 33-287 16-225 (637)
455 PF06293 Kdo: Lipopolysacchari 98.3 6.7E-06 1.5E-10 71.8 10.1 99 68-181 55-155 (206)
456 KOG0576|consensus 98.2 2.6E-07 5.7E-12 89.8 -0.9 258 14-391 229-492 (829)
457 PF06176 WaaY: Lipopolysacchar 98.0 4.1E-05 8.8E-10 66.3 9.3 133 25-181 28-172 (229)
458 COG0661 AarF Predicted unusual 98.0 1.3E-05 2.8E-10 78.7 6.9 137 34-181 131-302 (517)
459 TIGR02172 Fb_sc_TIGR02172 Fibr 97.7 0.00052 1.1E-08 60.7 11.7 72 34-126 7-78 (226)
460 COG2112 Predicted Ser/Thr prot 97.7 0.0002 4.4E-09 59.5 7.8 115 31-179 25-142 (201)
461 PF01636 APH: Phosphotransfera 97.6 0.00096 2.1E-08 58.9 11.7 78 33-126 2-79 (239)
462 PF13095 FTA2: Kinetochore Sim 97.6 0.0013 2.8E-08 56.4 11.5 122 27-176 36-196 (207)
463 KOG2270|consensus 97.5 0.00077 1.7E-08 62.5 10.0 127 32-180 148-301 (520)
464 cd05150 APH Aminoglycoside 3'- 97.4 0.0018 4E-08 57.9 11.7 71 35-126 5-76 (244)
465 KOG1035|consensus 97.4 0.00033 7.1E-09 73.3 6.2 162 126-388 271-439 (1351)
466 KOG1235|consensus 97.3 0.0021 4.5E-08 63.4 10.4 133 34-180 167-337 (538)
467 PF10707 YrbL-PhoP_reg: PhoP r 97.2 0.011 2.5E-07 50.9 13.6 125 34-182 7-156 (199)
468 PLN02876 acyl-CoA dehydrogenas 97.1 0.0081 1.8E-07 63.6 13.9 83 33-127 43-129 (822)
469 cd05155 APH_ChoK_like_1 Unchar 97.0 0.0073 1.6E-07 53.8 10.5 44 34-83 3-47 (235)
470 cd05157 ETNK_euk Ethanolamine 96.9 0.017 3.6E-07 51.3 12.5 52 33-84 3-55 (235)
471 PRK09550 mtnK methylthioribose 96.6 0.043 9.4E-07 52.6 12.9 76 33-125 31-114 (401)
472 TIGR02721 ycfN_thiK thiamine k 96.4 0.019 4.1E-07 51.8 8.9 46 36-83 4-50 (256)
473 PRK05231 homoserine kinase; Pr 96.2 0.16 3.4E-06 47.4 14.2 80 33-126 27-106 (319)
474 PF12260 PIP49_C: Protein-kina 96.1 0.018 4E-07 49.3 6.7 87 72-181 7-99 (188)
475 TIGR01767 MTRK 5-methylthiorib 96.0 0.084 1.8E-06 49.7 11.0 49 35-83 2-58 (370)
476 cd05156 ChoK_euk Choline Kinas 96.0 0.13 2.8E-06 47.6 12.3 53 33-85 3-61 (302)
477 KOG1093|consensus 95.9 0.019 4.1E-07 55.8 6.4 91 263-389 110-200 (725)
478 TIGR00938 thrB_alt homoserine 95.9 0.19 4.2E-06 46.6 13.3 81 33-126 27-107 (307)
479 cd05153 HomoserineK_II Homoser 95.8 0.096 2.1E-06 48.3 10.5 48 33-84 19-66 (296)
480 PLN02421 phosphotransferase, a 95.6 0.15 3.2E-06 48.0 11.4 53 33-85 19-74 (330)
481 PLN02236 choline kinase 95.6 0.16 3.4E-06 48.0 11.4 54 32-85 40-97 (344)
482 PRK12396 5-methylribose kinase 95.4 0.084 1.8E-06 50.3 8.8 51 33-83 34-91 (409)
483 KOG2268|consensus 95.2 0.0054 1.2E-07 56.1 0.0 123 29-181 93-239 (465)
484 PRK10593 hypothetical protein; 94.8 0.32 6.9E-06 44.9 10.7 109 32-162 18-127 (297)
485 PTZ00384 choline kinase; Provi 94.7 0.45 9.9E-06 45.6 11.7 52 33-84 55-112 (383)
486 cd05152 MPH2' Macrolide 2'-Pho 94.5 0.19 4E-06 46.0 8.2 46 37-84 20-65 (276)
487 COG5072 ALK1 Serine/threonine 94.3 0.11 2.4E-06 48.6 6.1 70 105-181 289-358 (488)
488 PRK11768 serine/threonine prot 94.1 1.3 2.8E-05 41.5 13.2 44 40-84 37-80 (325)
489 KOG1826|consensus 93.0 0.035 7.5E-07 60.6 0.7 129 113-284 1302-1440(2724)
490 PTZ00296 choline kinase; Provi 92.8 1.1 2.5E-05 43.8 10.8 53 32-84 109-169 (442)
491 KOG1236|consensus 92.5 0.54 1.2E-05 44.8 7.6 62 117-181 320-382 (565)
492 PF07387 Seadorna_VP7: Seadorn 89.7 2.2 4.7E-05 37.5 8.0 29 154-182 152-181 (308)
493 PHA03111 Ser/Thr kinase; Provi 89.6 1.2 2.5E-05 41.4 6.7 64 117-180 250-319 (444)
494 KOG2269|consensus 89.1 0.4 8.7E-06 44.2 3.4 61 117-180 358-420 (531)
495 TIGR02906 spore_CotS spore coa 88.9 0.85 1.8E-05 42.2 5.7 16 164-179 188-203 (313)
496 PF03881 Fructosamin_kin: Fruc 87.6 5.4 0.00012 36.6 9.8 74 32-124 21-94 (288)
497 PF05445 Pox_ser-thr_kin: Poxv 87.5 1.2 2.6E-05 41.5 5.4 65 117-181 246-316 (434)
498 PF03109 ABC1: ABC1 family; I 86.8 0.31 6.7E-06 38.3 1.1 45 34-81 17-61 (119)
499 PRK10271 thiK thiamine kinase; 86.8 0.59 1.3E-05 39.8 2.8 18 164-181 78-95 (188)
500 COG0510 ycfN Thiamine kinase a 84.5 1.7 3.6E-05 39.6 4.8 38 144-181 133-171 (269)
No 1
>KOG1290|consensus
Probab=100.00 E-value=7e-64 Score=457.65 Aligned_cols=380 Identities=53% Similarity=0.978 Sum_probs=330.0
Q ss_pred cccccccCCCCCCccccccCCeeC-CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhc
Q psy12288 4 DQQESYMEYRPGGYCPVQIGDLFN-FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVG 82 (393)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~ 82 (393)
+++|...+|++|||||++|||.|+ .||.+.++||+|.|+.||+|++..+.+.||+|+.+......+...+|+.+|+.+.
T Consensus 53 ~eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~ 132 (590)
T KOG1290|consen 53 EEQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVR 132 (590)
T ss_pred ccccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999998 9999999999999999999999999999999999988888899999999999998
Q ss_pred ccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 83 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
..+..+ ....+||++++.|...++++.|+|||+|++|.+|+.++......+++...++.|+.||+.||.|||..
T Consensus 133 ~~Dp~~------~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e 206 (590)
T KOG1290|consen 133 EGDPND------PGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE 206 (590)
T ss_pred hcCCCC------CCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 776332 26778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhc-cccc--------------------------------------------
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATK-HHKI-------------------------------------------- 197 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~-~~~~-------------------------------------------- 197 (393)
|||+|.||||+|||+..+.........+... ....
T Consensus 207 cgIIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~ 286 (590)
T KOG1290|consen 207 CGIIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEA 286 (590)
T ss_pred cCccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhh
Confidence 9999999999999997663222222222210 0000
Q ss_pred ------------------------CCcCCC---CCC-CC--CCC------------------------------------
Q psy12288 198 ------------------------GMKLPM---SLD-ST--MSD------------------------------------ 211 (393)
Q Consensus 198 ------------------------~~~~~~---~~~-~~--~~~------------------------------------ 211 (393)
+..... ... .. ++.
T Consensus 287 ~l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~ 366 (590)
T KOG1290|consen 287 SLAGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLS 366 (590)
T ss_pred hhcccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhccccccccccccc
Confidence 000000 000 00 000
Q ss_pred ------------CCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh
Q psy12288 212 ------------FSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT 279 (393)
Q Consensus 212 ------------~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~ 279 (393)
.-........+..++|+.|||.|++.....+..+.|..|+|||++.+++|++.+||||++|+.|||+|
T Consensus 367 s~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaT 446 (590)
T KOG1290|consen 367 SPSSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELAT 446 (590)
T ss_pred CcCCccccccccccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhc
Confidence 00001112445678999999999999988889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHH
Q psy12288 280 GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDF 359 (393)
Q Consensus 280 g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (393)
|-++|.+.+...+.++.++++.|++++|.+|..+...++-...||+..+..+.+..++.|....++.++++|+.+.+.+|
T Consensus 447 GDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~f 526 (590)
T KOG1290|consen 447 GDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQF 526 (590)
T ss_pred CceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 360 ADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 360 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+|+.-||.++|++||||.++|+|||++.+
T Consensus 527 sdFL~PmLef~PeKR~tA~~cl~hPwLn~~ 556 (590)
T KOG1290|consen 527 SDFLSPMLEFDPEKRPTAAQCLKHPWLNPV 556 (590)
T ss_pred HHHHHHHHhcCccccccHHHHhcCccccCC
Confidence 999999999999999999999999999964
No 2
>KOG0667|consensus
Probab=100.00 E-value=3.3e-53 Score=402.75 Aligned_cols=311 Identities=32% Similarity=0.556 Sum_probs=266.3
Q ss_pred cccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 18 CPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
..+-.+|.++.+|.|.+.||+|+||.|-+|++..|++.||||++++......+...|+.+|..+.....- +-
T Consensus 176 Y~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~--------~~ 247 (586)
T KOG0667|consen 176 YQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPD--------DK 247 (586)
T ss_pred eeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCC--------CC
Confidence 4566788999999999999999999999999999999999999999888888889999999999743322 55
Q ss_pred ccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
-|++++++.|. ..+|+|||+|.++.+|.++++.....+++...++.++.||+.||.+||+. ||+|+||||+|||+
T Consensus 248 ~n~Vrm~d~F~----fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l-~IIHcDLKPENILL 322 (586)
T KOG0667|consen 248 YNIVRMLDYFY----FRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL-GIIHCDLKPENILL 322 (586)
T ss_pred eeEEEeeeccc----cccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCChhheee
Confidence 68999999998 78899999999999999999998888999999999999999999999997 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~ 257 (393)
..... ..+|++|||+++.........+.+..|+|||++.
T Consensus 323 ~~~~r-----------------------------------------~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVIL 361 (586)
T KOG0667|consen 323 KDPKR-----------------------------------------SRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVIL 361 (586)
T ss_pred ccCCc-----------------------------------------CceeEEecccccccCCcceeeeeccccccchhhc
Confidence 65542 2599999999998887777889999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC-CCCee--ecc
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP-QGNFR--RID 334 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~ 334 (393)
+.+|+.+.||||||||+.||++|.+.|++.+ ..++++.|++++|.+|..++....+...+|+. .+..+ ...
T Consensus 362 GlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n------e~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~ 435 (586)
T KOG0667|consen 362 GLPYDTAIDMWSLGCILAELFTGEPLFPGDN------EYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVET 435 (586)
T ss_pred cCCCCCccceeehhhhHHhHhcCccccCCCC------HHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeee
Confidence 9999999999999999999999999999999 89999999999999999999999999999988 44332 111
Q ss_pred CCCc-------chhHHHHhhh--c---------cCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 335 NLKP-------WGLYQVLTEK--Y---------HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 335 ~~~~-------~~~~~~~~~~--~---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.... +......... . .+.......|+|||.+||.+||.+|+|+.|+|+||||..
T Consensus 436 ~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 436 SAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred cccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence 1110 0000000000 0 112245678899999999999999999999999999984
No 3
>KOG0615|consensus
Probab=100.00 E-value=6.6e-53 Score=378.93 Aligned_cols=257 Identities=30% Similarity=0.455 Sum_probs=215.5
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--------chhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--------ADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
.+++.|.+.+.||+|+||.|-+|..+.|++.||||++++.... ...+.+|+++|+.+ .
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL--------------~ 234 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL--------------S 234 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc--------------C
Confidence 4788999999999999999999999999999999999753221 23357999999999 9
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
||+|+++.+.|. ...+.||||||+ ||+|++.+.... .+.++..+-++.|++.|+.|||++ ||+||||||+||
T Consensus 235 HP~IV~~~d~f~----~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~-GI~HRDiKPeNI 307 (475)
T KOG0615|consen 235 HPNIVRIKDFFE----VPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQ-GIIHRDIKPENI 307 (475)
T ss_pred CCCEEEEeeeee----cCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHc-CcccccCCcceE
Confidence 999999999998 677889999999 999999998764 488888999999999999999999 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchh
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSV 253 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aP 253 (393)
|+..+.. +..+|++|||+|...+ +...+.+||+.|.||
T Consensus 308 Ll~~~~e----------------------------------------~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAP 347 (475)
T KOG0615|consen 308 LLSNDAE----------------------------------------DCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAP 347 (475)
T ss_pred EeccCCc----------------------------------------ceEEEecccchhhccccceehhhhcCCccccCh
Confidence 9977643 2259999999999774 456788999999999
Q ss_pred HHHhcCC---CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 254 EVLIGAG---YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 254 E~~~~~~---~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
|++.+.+ ++.++|+||+||++|-+++|.+||.+...... ...
T Consensus 348 EVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-----l~e------------------------------ 392 (475)
T KOG0615|consen 348 EVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-----LKE------------------------------ 392 (475)
T ss_pred hheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-----HHH------------------------------
Confidence 9999875 35588999999999999999999975543210 011
Q ss_pred eeccCCCcchhHHHHhhhc----cCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKY----HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
++.+.++ ..+...+.+.++||.+||..||++|||++|+|+||||+..
T Consensus 393 ------------QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~ 443 (475)
T KOG0615|consen 393 ------------QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA 443 (475)
T ss_pred ------------HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence 1111111 1236788999999999999999999999999999999964
No 4
>KOG0593|consensus
Probab=100.00 E-value=1.6e-51 Score=356.51 Aligned_cols=281 Identities=29% Similarity=0.472 Sum_probs=234.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|+.+.++|+|+||+||+|+++.||+.||||.+..++ ...+-..+|+.+|+.+ .|+|+|.++
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL--------------kH~NLVnLi 67 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL--------------KHENLVNLI 67 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc--------------ccchHHHHH
Confidence 47899999999999999999999999999999887543 3345568999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+|. ....+++|||||..++++.+.+.. .+++.+.+..++.|++.|+.|+|++ +++||||||+|||++.++
T Consensus 68 EVFr----rkrklhLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~-n~IHRDIKPENILit~~g--- 138 (396)
T KOG0593|consen 68 EVFR----RKRKLHLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKN-NCIHRDIKPENILITQNG--- 138 (396)
T ss_pred HHHH----hcceeEEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhc-CeecccCChhheEEecCC---
Confidence 9997 667799999999999999988765 5699999999999999999999999 999999999999999887
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhc-CC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIG-AG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~ 260 (393)
.+||||||+|+.+.. ..+..+.|.+|+|||.+.+ .+
T Consensus 139 ----------------------------------------vvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtq 178 (396)
T KOG0593|consen 139 ----------------------------------------VVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQ 178 (396)
T ss_pred ----------------------------------------cEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCc
Confidence 499999999997753 3455678999999999998 67
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|+.++||||+||++.||++|.+.|++.+ +.+++-.|...+|.+++.-.. .|..+.-+....-..+ .
T Consensus 179 YG~pVDiWAiGCv~aEl~~G~pL~PG~S------DiDQLy~I~ktLG~L~prhq~-------iF~~N~~F~Gv~lP~~-~ 244 (396)
T KOG0593|consen 179 YGKPVDIWAIGCVFAELLTGEPLWPGRS------DIDQLYLIRKTLGNLIPRHQS-------IFSSNPFFHGVRLPEP-E 244 (396)
T ss_pred CCCcccchhhhHHHHHHhcCCcCCCCcc------hHHHHHHHHHHHcccCHHHHH-------HhccCCceeeeecCCC-C
Confidence 9999999999999999999999999988 899999999999997764432 3333333322211111 1
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+-++.++ ...+..++||+++||..||.+|++.+|++.||||.+
T Consensus 245 ~~epLe~k~---p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 245 HPEPLERKY---PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred Cccchhhhc---ccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 111222222 244568889999999999999999999999999944
No 5
>KOG0661|consensus
Probab=100.00 E-value=8e-52 Score=378.02 Aligned_cols=284 Identities=29% Similarity=0.483 Sum_probs=232.7
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhh--HHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA--RDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~--~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+-++|+++++||.|+||.||+|....+++.||||.+++....-++. .+|+..|+++. .|+||+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln-------------~hpniikL 74 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-------------PHPNIIKL 74 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcC-------------CCCcchhh
Confidence 4579999999999999999999999999999999998654433333 57999999981 49999999
Q ss_pred cccceeecCCCe-EEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGT-HICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~-~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
..++. +++ .+++|||+|..+|..++..+ ...|++..++.||.||+.||+++|++ |+.|||+||+|||+..+.
T Consensus 75 ~Evi~----d~~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~-GfFHRDlKPENiLi~~~~- 147 (538)
T KOG0661|consen 75 KEVIR----DNDRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH-GFFHRDLKPENILISGND- 147 (538)
T ss_pred HHHhh----ccCceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc-CcccccCChhheEecccc-
Confidence 99887 333 89999999999999999888 56799999999999999999999998 999999999999997544
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~ 260 (393)
.+||+|||+|+... .+.+..+-|.+|+|||++....
T Consensus 148 ------------------------------------------~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~ 185 (538)
T KOG0661|consen 148 ------------------------------------------VIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSG 185 (538)
T ss_pred ------------------------------------------eeEecccccccccccCCCcchhhhcccccchHHhhhcc
Confidence 49999999999775 3466778899999999998765
Q ss_pred -CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 -YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 -~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
|+.+.|+|++||+++|+++-++.|++.+ +.+++..|-+++|......+..+.+.....+ -..+...+.
T Consensus 186 ~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s------E~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn-----f~~P~~~~~ 254 (538)
T KOG0661|consen 186 YYSSPVDMWAVGCIMAELYSLRPLFPGAS------EIDQIYKICEVLGTPDKDSWPEGYNLASAMN-----FRFPQVKPS 254 (538)
T ss_pred ccCCchHHHHHHHHHHHHHHhcccCCCCc------HHHHHHHHHHHhCCCccccchhHHHHHHHhc-----cCCCcCCCC
Confidence 7999999999999999999999999999 8999999999999876655544321111100 011111111
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+... + ...+.++.++|.+||.|||.+||||.|+|+||||...
T Consensus 255 ~l~~L------~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 255 PLKDL------L-PNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred ChHHh------C-cccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 11111 1 2367889999999999999999999999999999754
No 6
>KOG0575|consensus
Probab=100.00 E-value=6.6e-50 Score=376.45 Aligned_cols=255 Identities=26% Similarity=0.462 Sum_probs=222.9
Q ss_pred cCCeeC----CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec----ccccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 22 IGDLFN----FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS----DQVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 22 ~~~~~~----~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
+|+.|. .+|.+.+.||+|||+.||.+++..+|+.||+|++.+ .....+++.+|+++.+.+
T Consensus 8 ip~~i~D~~~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L------------ 75 (592)
T KOG0575|consen 8 IPEVIEDPRSKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL------------ 75 (592)
T ss_pred CCCeeecCCcceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc------------
Confidence 455554 489999999999999999999999999999999876 556678899999999999
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
.|+|||++++.|+ +..++|||.|+| .++|..++.++ ..+++.+++.++.||+.||.|||++ +|+|||||.
T Consensus 76 --~HpnIV~f~~~FE----Ds~nVYivLELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~-~IiHRDLKL 146 (592)
T KOG0575|consen 76 --KHPNIVQFYHFFE----DSNNVYIVLELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSL-GIIHRDLKL 146 (592)
T ss_pred --CCCcEEeeeeEee----cCCceEEEEEecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhc-Cceecccch
Confidence 8999999999998 788899999999 78888888755 4599999999999999999999998 999999999
Q ss_pred CceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCC
Q psy12288 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQ 249 (393)
Q Consensus 173 ~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~ 249 (393)
.|++++.+.+ +|++|||+|..+. ....+.+|||.
T Consensus 147 GNlfL~~~~~-------------------------------------------VKIgDFGLAt~le~~~Erk~TlCGTPN 183 (592)
T KOG0575|consen 147 GNLFLNENMN-------------------------------------------VKIGDFGLATQLEYDGERKKTLCGTPN 183 (592)
T ss_pred hheeecCcCc-------------------------------------------EEecccceeeeecCcccccceecCCCc
Confidence 9999998873 9999999998775 34567799999
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|.|||++...+++..+||||+||+||-|++|++||...+. .+.+.
T Consensus 184 YIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v------kety~----------------------------- 228 (592)
T KOG0575|consen 184 YIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV------KETYN----------------------------- 228 (592)
T ss_pred ccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH------HHHHH-----------------------------
Confidence 9999999999999999999999999999999999975542 22222
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.+....+.+|...+..+.+||++||..||.+|||++++|.|+||+.
T Consensus 229 -------------~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 229 -------------KIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred -------------HHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 2333445566677889999999999999999999999999999954
No 7
>KOG0663|consensus
Probab=100.00 E-value=8.4e-50 Score=350.09 Aligned_cols=284 Identities=25% Similarity=0.354 Sum_probs=235.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.|+.+.+|++|+||+||+|++..|++.||+|.++.+. ...-...+|+.+|..+ .|+||+.+-
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~--------------~H~NIV~vk 141 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKA--------------RHPNIVEVK 141 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhc--------------CCCCeeeeE
Confidence 57999999999999999999999999999999987543 3344558999999999 799999988
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+.. +.+-+.+|||||||..+|..++.... ++|...+++.++.|++.|++|||.+ .|+|||||++|+|++..+
T Consensus 142 EVVv--G~~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~-wilHRDLK~SNLLm~~~G--- 214 (419)
T KOG0663|consen 142 EVVV--GSNMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN-WILHRDLKTSNLLLSHKG--- 214 (419)
T ss_pred EEEe--ccccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc-eeEecccchhheeeccCC---
Confidence 7765 44566799999999999999987765 5799999999999999999999998 999999999999998777
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC-
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~- 260 (393)
.+|++|||+|+.++.+ .+..+-|.+|+|||++.+.+
T Consensus 215 ----------------------------------------~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~t 254 (419)
T KOG0663|consen 215 ----------------------------------------ILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKT 254 (419)
T ss_pred ----------------------------------------cEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcc
Confidence 4999999999998876 45556799999999999975
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|++++|+||+|||+.||+.+++.|++.+ +.+++..|..++|......|....+.- .++.......+.
T Consensus 255 yst~iDMWSvGCI~aE~l~~kPlf~G~s------E~dQl~~If~llGtPte~iwpg~~~lp-----~~k~~~f~~~py-- 321 (419)
T KOG0663|consen 255 YSTAVDMWSVGCIFAELLTQKPLFPGKS------EIDQLDKIFKLLGTPSEAIWPGYSELP-----AVKKMTFSEHPY-- 321 (419)
T ss_pred cCcchhhhhHHHHHHHHHhcCCCCCCCc------hHHHHHHHHHHhCCCccccCCCccccc-----hhhccccCCCCc--
Confidence 8999999999999999999999999988 889999999999998776654432211 011111111222
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+..+++... .+...++|+..+|.+||.+|.||+|.|+|+||+.
T Consensus 322 --n~lr~kF~~~~-lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 322 --NNLRKKFGALS-LSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred --hhhhhhccccc-cchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 22333333222 5678889999999999999999999999999987
No 8
>KOG0659|consensus
Probab=100.00 E-value=1.3e-49 Score=338.91 Aligned_cols=278 Identities=29% Similarity=0.470 Sum_probs=232.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|...+++|+|+||.||+|++..||+.||||.++.. ........+|+.+|+.+ .|+||+.++
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel--------------~h~nIi~Li 67 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL--------------KHPNIIELI 67 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHc--------------cCcchhhhh
Confidence 5799999999999999999999999999999998754 23356678999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
++|. ..+.+.+|+||+..+|...+.... -.++...+..++.++++|++|||.+ .|+||||||.|+|++.++
T Consensus 68 D~F~----~~~~l~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~-~IlHRDlKPnNLLis~~g--- 138 (318)
T KOG0659|consen 68 DVFP----HKSNLSLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSK-WILHRDLKPNNLLISSDG--- 138 (318)
T ss_pred hhcc----CCCceEEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhh-hhhcccCCccceEEcCCC---
Confidence 9998 677799999999999999887654 4588999999999999999999998 999999999999999888
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCC-
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~- 260 (393)
.+|++|||+++.++... ...+-|.+|+|||.+.|++
T Consensus 139 ----------------------------------------~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~ 178 (318)
T KOG0659|consen 139 ----------------------------------------QLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQ 178 (318)
T ss_pred ----------------------------------------cEEeecccchhccCCCCcccccceeeeeccChHHhccchh
Confidence 49999999999876543 2336799999999999975
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|+..+|+||.||++.||+.|.+.|++.+ +.+++..+...+|..-++.|......-.+-.-. ..+....
T Consensus 179 Yg~~VDmWavGCI~AELllr~P~fpG~s------DidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~----~~P~~~~-- 246 (318)
T KOG0659|consen 179 YGTGVDMWAVGCIFAELLLRVPFFPGDS------DIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ----QFPKPPL-- 246 (318)
T ss_pred cCCcchhhhHHHHHHHHHccCCCCCCCc------hHHHHHHHHHHcCCCCcccCccccccccHHHHh----cCCCCcc--
Confidence 8999999999999999999999999988 999999999999987777666544432221110 0000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+=..++.+++||+.+||.+||.+|+|++|+|+|+||+.
T Consensus 247 --------~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 247 --------NNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred --------ccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 0011345667799999999999999999999999999985
No 9
>KOG0581|consensus
Probab=100.00 E-value=6.9e-50 Score=356.76 Aligned_cols=256 Identities=27% Similarity=0.406 Sum_probs=214.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEe--cccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+.+.++.||+|+.|.||+|.|+.|++.+|+|++. .++....++.+|+++++.. .||+|+.+++.
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~--------------~spyIV~~yga 145 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC--------------QSPYIVGFYGA 145 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC--------------CCCCeeeEeEE
Confidence 6778899999999999999999999999999884 4455667789999999999 89999999999
Q ss_pred ceeecCCCe-EEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 107 FKIYSRNGT-HICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 107 ~~~~~~~~~-~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
|. .+. .+.|+|||| +|+|...+... +.+++....+++.++++||.|||+..+|+||||||+|||++..++
T Consensus 146 F~----~~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGe-- 217 (364)
T KOG0581|consen 146 FY----SNGEEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGE-- 217 (364)
T ss_pred EE----eCCceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCC--
Confidence 98 444 699999999 67777776654 559999999999999999999996339999999999999987774
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
+||||||.+..+..+ ....+||..|||||.+.+..|+.
T Consensus 218 -----------------------------------------VKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~ 256 (364)
T KOG0581|consen 218 -----------------------------------------VKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSV 256 (364)
T ss_pred -----------------------------------------EEeccccccHHhhhhhcccccccccccChhhhcCCcCCc
Confidence 999999999877544 46789999999999999999999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++||||||+.++|+++|++||..... . ..+.+..+.. +.++.|.
T Consensus 257 ~sDIWSLGLsllE~a~GrfP~~~~~~-~---~~~~~~Ll~~Iv~~ppP~------------------------------- 301 (364)
T KOG0581|consen 257 KSDIWSLGLSLLELAIGRFPYPPPNP-P---YLDIFELLCAIVDEPPPR------------------------------- 301 (364)
T ss_pred ccceecccHHHHHHhhCCCCCCCcCC-C---CCCHHHHHHHHhcCCCCC-------------------------------
Confidence 99999999999999999999976521 1 1122222222 2223222
Q ss_pred HHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 343 QVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 343 ~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
++.+ ++++|.+|+.+||..||.+||++.|+++|||+++..
T Consensus 302 --------lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 302 --------LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred --------CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 3444 788999999999999999999999999999998643
No 10
>KOG0600|consensus
Probab=100.00 E-value=2.5e-49 Score=364.16 Aligned_cols=280 Identities=29% Similarity=0.481 Sum_probs=232.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+.|+.+++||+|+||.||+|++..||+.||+|.+..+ ........+|+.+|+++ .|+||+++
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l--------------~HpNIikL 181 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL--------------DHPNIIKL 181 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc--------------CCCcccce
Confidence 46899999999999999999999999999999988643 34455568999999999 99999999
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+.... +....+|+|||||..+|.-++.... -.|++.++..+|.||+.||+|||.+ ||+|||||.+|||+|.++
T Consensus 182 ~eivt~--~~~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~-gvlHRDIK~SNiLidn~G-- 255 (560)
T KOG0600|consen 182 EEIVTS--KLSGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSR-GVLHRDIKGSNILIDNNG-- 255 (560)
T ss_pred eeEEEe--cCCceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhc-CeeeccccccceEEcCCC--
Confidence 998873 2456899999999999998886643 3499999999999999999999998 999999999999999887
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhHHHhcC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~ 259 (393)
.+||+|||+|+.+.. ..+..+-|++|+|||++.+.
T Consensus 256 -----------------------------------------~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~ 294 (560)
T KOG0600|consen 256 -----------------------------------------VLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGA 294 (560)
T ss_pred -----------------------------------------CEEeccccceeeccCCCCcccccceEEeeccChHHhcCC
Confidence 499999999996643 35566779999999999997
Q ss_pred -CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc-cccccCCCCCeeeccCCC
Q psy12288 260 -GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK-TLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 260 -~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 337 (393)
.|+.++|+||+||||.||+.|+++|++.+ +.+++..|+++.|.+..+.|...+. ....|.+....
T Consensus 295 t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t------EveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y------- 361 (560)
T KOG0600|consen 295 TSYGTAVDLWSVGCILAELFLGKPILQGRT------EVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPY------- 361 (560)
T ss_pred cccccceeehhhhHHHHHHHcCCCCcCCcc------HHHHHHHHHHHhCCCChhccccccCCcccccCCCCcc-------
Confidence 58999999999999999999999999888 8999999999999988877662211 11222221111
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
...+.+.+ ...+...++|+..||+.||.+|.||.++|+|+||.
T Consensus 362 ----~r~l~E~~---~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~ 404 (560)
T KOG0600|consen 362 ----KRRLRETF---KDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT 404 (560)
T ss_pred ----cchHHHHh---ccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence 11222322 24557788999999999999999999999999994
No 11
>KOG0671|consensus
Probab=100.00 E-value=1.3e-49 Score=354.96 Aligned_cols=330 Identities=28% Similarity=0.490 Sum_probs=258.0
Q ss_pred cccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 18 CPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
..-+.||++..+|.+++.+|+|+||.|-.+++..++..||||+++.-....+...-|+++|+.+...... +-
T Consensus 79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~--------g~ 150 (415)
T KOG0671|consen 79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPN--------GK 150 (415)
T ss_pred EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCC--------Cc
Confidence 3457899999999999999999999999999999999999999998777778888999999999655432 33
Q ss_pred ccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
..++.+.+.|. ..++.|||+|.+|.++++++......+++.+.++.+..|++++++|||+. +++|.||||+|||+
T Consensus 151 ~rcv~m~~wFd----yrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~-kl~HTDLKPENILf 225 (415)
T KOG0671|consen 151 FRCVQMRDWFD----YRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL-KLTHTDLKPENILF 225 (415)
T ss_pred eEEEeeehhhh----ccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc-ceeecCCChheEEE
Confidence 44677777776 67899999999999999999998888899999999999999999999998 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~ 257 (393)
....+... ...+ .. ...........++++|||.|.........-+.|..|+|||++.
T Consensus 226 vss~~~~~----------~~~k---------~~----~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViL 282 (415)
T KOG0671|consen 226 VSSEYFKT----------YNPK---------KK----VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVIL 282 (415)
T ss_pred eccceEEE----------eccC---------Cc----cceeccCCCcceEEEecCCcceeccCcceeeeccccCCchhee
Confidence 54432100 0000 00 0000111122489999999998877777888999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+.+++..+||||+|||++|+++|...|+..+ ..++++++..++|++|.....+.. ..++|... .....+...
T Consensus 283 gLGwS~pCDvWSiGCIL~ElytG~~LFqtHe------n~EHLaMMerIlGp~P~~mi~r~~-~~Kyf~~~-rldw~e~~~ 354 (415)
T KOG0671|consen 283 GLGWSQPCDVWSIGCILVELYTGETLFQTHE------NLEHLAMMERILGPIPSRMIKKTR-KEKYFRRG-RLDWPEVSS 354 (415)
T ss_pred ccCcCCccCceeeeeEEEEeeccceecccCC------cHHHHHHHHHhhCCCcHHHhhhhh-hHhhhhcc-cccCccccc
Confidence 9999999999999999999999999998777 889999999999999998887764 22222222 222111111
Q ss_pred cchhHHHHh------hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLT------EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
......+++ .-..-.+.+...++|||++||.+||.+|+|+.|+|.||||+....
T Consensus 355 ~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~~ 414 (415)
T KOG0671|consen 355 KGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLTP 414 (415)
T ss_pred cccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCCC
Confidence 111111110 001123567788999999999999999999999999999997654
No 12
>KOG0598|consensus
Probab=100.00 E-value=1.2e-48 Score=348.68 Aligned_cols=251 Identities=24% Similarity=0.391 Sum_probs=215.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-++|+++++||+|+||.||.++...|++.+|+|++++.. ........|..+|..+ .||.+++
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v--------------~hPFiv~ 89 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI--------------KHPFIVK 89 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC--------------CCCcEee
Confidence 368999999999999999999999999999999998643 2345678899999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+...|+ +...+|+|++|+ ||.|+..+.+. +.++++.++.++.+|+.||.|||+. ||+||||||+|||++.++
T Consensus 90 l~ysFQ----t~~kLylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~-gIiyRDlKPENILLd~~G 162 (357)
T KOG0598|consen 90 LIYSFQ----TEEKLYLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSK-GIIYRDLKPENILLDEQG 162 (357)
T ss_pred eEEecc----cCCeEEEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHeeecCCC
Confidence 999999 788899999999 88999998765 4599999999999999999999998 999999999999999988
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~ 258 (393)
. ++|+|||++... +......+||+.|||||++.+
T Consensus 163 H-------------------------------------------i~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~ 199 (357)
T KOG0598|consen 163 H-------------------------------------------IKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLG 199 (357)
T ss_pred c-------------------------------------------EEEeccccchhcccCCCccccccCCccccChHHHhc
Confidence 4 999999999843 234556799999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.+|+.++|+||||+++|+|++|.+||.+.+.. ...+.
T Consensus 200 ~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------~~~~~------------------------------------- 236 (357)
T KOG0598|consen 200 KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------KMYDK------------------------------------- 236 (357)
T ss_pred CCCCcccchHhHHHHHHHHhhCCCCCcCccHH------HHHHH-------------------------------------
Confidence 99999999999999999999999999876622 11122
Q ss_pred chhHHHHhhhc-cCChhhHHHHHHHHHhccccCCCCCc----CHHHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKY-HWSKAEASDFADFLLPMLHVNQKLRA----SAADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rp----t~~ell~hp~~~~~ 389 (393)
+.+.+. ..+.-.+....++++++|+.||++|. ++.++-+||||+++
T Consensus 237 -----I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 237 -----ILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred -----HhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 222221 12233677889999999999999996 68999999999976
No 13
>KOG0660|consensus
Probab=100.00 E-value=9.3e-49 Score=348.13 Aligned_cols=286 Identities=30% Similarity=0.494 Sum_probs=235.2
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEe---cccccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+..+|...+.||.|+||+|+.|.+..+|+.||||.+. .+....++..+|+.+|+.+ .|+||+.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~--------------~HeNIi~ 85 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL--------------RHENIIG 85 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh--------------cCCCcce
Confidence 3567777899999999999999999999999999776 3445578889999999999 7999999
Q ss_pred cccccee-ecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKI-YSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~-~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+++.. ...+-.-+|+|+|+|+.+|...+..+ ..++.+.+..++.|++.||+|+|+. +++||||||.|++++.|.
T Consensus 86 l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSA-nViHRDLKPsNll~n~~c 162 (359)
T KOG0660|consen 86 LLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLNADC 162 (359)
T ss_pred EEeecccccccccceeEEehhHHhhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcc-cccccccchhheeeccCC
Confidence 9998875 22244569999999999999998775 3489999999999999999999997 999999999999998887
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-----CCCCCCCCCCCCchhHHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-----DHFADEIQTRQYRSVEVL 256 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-----~~~~~~~~t~~y~aPE~~ 256 (393)
. +|++|||+|+... ...+..+-|.+|+|||++
T Consensus 163 ~-------------------------------------------lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPEll 199 (359)
T KOG0660|consen 163 D-------------------------------------------LKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELL 199 (359)
T ss_pred C-------------------------------------------EEeccccceeeccccCcccchhcceeeeeecCHHHH
Confidence 4 8999999999873 344667889999999998
Q ss_pred hcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc--cccccCCCCCeeec
Q psy12288 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK--TLRYFTPQGNFRRI 333 (393)
Q Consensus 257 ~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~ 333 (393)
... .|+.+.||||+||||.||++|++.|++.+ ...++..+..+.|.++.+.+..... ..++.. ..
T Consensus 200 l~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d------~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~------sl 267 (359)
T KOG0660|consen 200 LNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD------YVHQLQLILELLGTPSEEDLQKIRSEKARPYIK------SL 267 (359)
T ss_pred hccccccchhhhhhhhHHHHHHHcCCCCCCCCc------hHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHH------hC
Confidence 764 69999999999999999999999999888 8889999999999998887765431 111111 11
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
+..++.....++ ...++.+++|+.+||.+||.+|+|++|+|+||||....
T Consensus 268 p~~p~~~f~~~f-------p~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~h 317 (359)
T KOG0660|consen 268 PQIPKQPFSSIF-------PNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYH 317 (359)
T ss_pred CCCCCCCHHHHc-------CCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhc
Confidence 111111112222 24567888999999999999999999999999998654
No 14
>KOG0592|consensus
Probab=100.00 E-value=9.9e-48 Score=356.37 Aligned_cols=252 Identities=25% Similarity=0.398 Sum_probs=221.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+|.+++.||+|+|+.|++|+...+++.+|||++.+.- ...+.+..|-.+|..|. .||.|+++
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~-------------~hPgivkL 139 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS-------------GHPGIVKL 139 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh-------------CCCCeEEE
Confidence 58999999999999999999999999999999987532 33456778888999984 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+..|+ +...+|.|+||+ +|+|++++.+. +.|++..++.++.||+.||+|||.+ ||+||||||+|||++.|+
T Consensus 140 y~TFQ----D~~sLYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~-GIIHRDlKPENILLd~dm- 211 (604)
T KOG0592|consen 140 YFTFQ----DEESLYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSN-GIIHRDLKPENILLDKDG- 211 (604)
T ss_pred EEEee----cccceEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeEcCCC-
Confidence 99998 667799999999 99999999876 5699999999999999999999998 999999999999999998
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------CCCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------------FADEIQ 246 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------------~~~~~~ 246 (393)
+++|+|||.|..+... ....+|
T Consensus 212 ------------------------------------------hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVG 249 (604)
T KOG0592|consen 212 ------------------------------------------HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVG 249 (604)
T ss_pred ------------------------------------------cEEEeeccccccCChhhccccCccCcccccCcccceee
Confidence 4999999998766321 134689
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
|..|.+||++.....+..+|+|+|||++|.|+.|.+||.+.+ +...+++|+.+
T Consensus 250 TAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N------eyliFqkI~~l--------------------- 302 (604)
T KOG0592|consen 250 TAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN------EYLIFQKIQAL--------------------- 302 (604)
T ss_pred eecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc------HHHHHHHHHHh---------------------
Confidence 999999999999999999999999999999999999999877 44555555554
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.+.|+.+.++.+.+||+++|..||.+|+|++||-+||||.++.
T Consensus 303 ---------------------~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 303 ---------------------DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred ---------------------cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 4456667778999999999999999999999999999999863
No 15
>KOG0616|consensus
Probab=100.00 E-value=4.6e-48 Score=334.19 Aligned_cols=252 Identities=26% Similarity=0.426 Sum_probs=225.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-++|++++.||.|+||.|-+++++.+|..+|+|++.+... ..+...+|..+|+.+ .||.+++
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v--------------~~PFlv~ 108 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV--------------SHPFLVK 108 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc--------------cCceeEE
Confidence 3579999999999999999999999999999999986432 246668899999999 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. +..++++||||+ ||.++.++.+. +++++..++.++.||+.||+|||+. +|++|||||+|||+|.++
T Consensus 109 l~~t~~----d~~~lymvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~-~iiYRDLKPENiLlD~~G 181 (355)
T KOG0616|consen 109 LYGTFK----DNSNLYMVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSL-DIIYRDLKPENLLLDQNG 181 (355)
T ss_pred EEEeec----cCCeEEEEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhc-CeeeccCChHHeeeccCC
Confidence 999998 788999999999 88999998776 4599999999999999999999998 999999999999999988
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
. +|++|||.|........+.+|||.|+|||++...++
T Consensus 182 ~-------------------------------------------iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~y 218 (355)
T KOG0616|consen 182 H-------------------------------------------IKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGY 218 (355)
T ss_pred c-------------------------------------------EEEEeccceEEecCcEEEecCCccccChHHhhcCCC
Confidence 5 999999999988877778899999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|.|||||++|||+.|++||.+.++.. . .
T Consensus 219 nkavDWWalGVLIYEMlaG~pPF~~~~~~~------i------------------------------------------Y 250 (355)
T KOG0616|consen 219 NKAVDWWALGVLIYEMLAGYPPFYDDNPIQ------I------------------------------------------Y 250 (355)
T ss_pred CcchhHHHHHHHHHHHHcCCCCCcCCChHH------H------------------------------------------H
Confidence 999999999999999999999998766321 1 2
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~~ 390 (393)
.+++..+..||.-.+.++.+|++++|+.|-.+|. ..+++..||||+++.
T Consensus 251 ~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 251 EKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred HHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 3566677788889999999999999999999994 578999999999863
No 16
>KOG0605|consensus
Probab=100.00 E-value=2.8e-47 Score=353.48 Aligned_cols=253 Identities=24% Similarity=0.436 Sum_probs=210.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|+++++||+|+||.||+|+.+.||..+|+|+++++... ...+..|-.+|... .++.+|+
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~--------------ds~~vVK 205 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV--------------DSPWVVK 205 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc--------------CCCcEEE
Confidence 36899999999999999999999999999999999876433 45567788888876 8899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++..|+ +..++|+||||+ ||+.-.++.+. ..++++.++.++.+++.|+..||+. |++||||||+|+|+|..|
T Consensus 206 LyYsFQ----D~~~LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~-gyIHRDIKPdNlLiD~~G 278 (550)
T KOG0605|consen 206 LYYSFQ----DKEYLYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQL-GYIHRDIKPDNLLIDAKG 278 (550)
T ss_pred EEEEec----CCCeeEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHc-CcccccCChhheeecCCC
Confidence 999999 888999999999 88888888776 4599999999999999999999998 999999999999999888
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----------------------
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---------------------- 239 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---------------------- 239 (393)
. +||+|||++..+..
T Consensus 279 H-------------------------------------------iKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~ 315 (550)
T KOG0605|consen 279 H-------------------------------------------IKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKP 315 (550)
T ss_pred C-------------------------------------------EeeccccccchhhhhhhhhhhcchhhhhhhhccCCC
Confidence 4 88888887632210
Q ss_pred ---C-------------------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC
Q psy12288 240 ---H-------------------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291 (393)
Q Consensus 240 ---~-------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~ 291 (393)
. ....+|||.|+|||++.+.+|+..+|+||||||+|||+.|.+||.+.++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~- 394 (550)
T KOG0605|consen 316 SDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQ- 394 (550)
T ss_pred ccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 0 01127899999999999999999999999999999999999999988733
Q ss_pred CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhcccc
Q psy12288 292 YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHV 369 (393)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~ 369 (393)
+....++...- . ..+| ...+.++.|||.+||+
T Consensus 395 -----~T~rkI~nwr~------------~----------------------------l~fP~~~~~s~eA~DLI~rll~- 428 (550)
T KOG0605|consen 395 -----ETYRKIVNWRE------------T----------------------------LKFPEEVDLSDEAKDLITRLLC- 428 (550)
T ss_pred -----HHHHHHHHHhh------------h----------------------------ccCCCcCcccHHHHHHHHHHhc-
Confidence 33333333211 1 1111 2345788999999999
Q ss_pred CCCCCcC---HHHHhcCCCCCCCC
Q psy12288 370 NQKLRAS---AADCLRHPWLNPRR 390 (393)
Q Consensus 370 dP~~Rpt---~~ell~hp~~~~~~ 390 (393)
||++|.. ++||-.||||+++.
T Consensus 429 d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 429 DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred CHHHhcCcccHHHHhcCCccccCC
Confidence 9999995 89999999999873
No 17
>KOG0583|consensus
Probab=100.00 E-value=1.1e-46 Score=354.70 Aligned_cols=253 Identities=27% Similarity=0.449 Sum_probs=215.6
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-----c-ccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-----Q-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
....+|.+.+.||+|+||.|+.|++..++..||+|++... . ...+.+.+|+.+++.+. .||
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~-------------~Hp 80 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLR-------------SHP 80 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhc-------------cCC
Confidence 3456899999999999999999999999999999977653 1 23456678999999992 399
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
||+++.+++. ....+++||||+ +|+|++.+... +.+.+++++.+++|++.|++|||.+ ||+||||||+|||+
T Consensus 81 nI~~l~ev~~----t~~~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~-gi~HRDLK~ENill 153 (370)
T KOG0583|consen 81 NIIRLLEVFA----TPTKIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSR-GIVHRDLKPENILL 153 (370)
T ss_pred CEeEEEEEEe----cCCeEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEe
Confidence 9999999998 566699999999 78999999883 5599999999999999999999998 99999999999999
Q ss_pred eec-hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchh
Q psy12288 178 CVD-YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSV 253 (393)
Q Consensus 178 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aP 253 (393)
+.+ + .+||+|||++... .......+||+.|+||
T Consensus 154 d~~~~-------------------------------------------~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aP 190 (370)
T KOG0583|consen 154 DGNEG-------------------------------------------NLKLSDFGLSAISPGEDGLLKTFCGSPAYAAP 190 (370)
T ss_pred cCCCC-------------------------------------------CEEEeccccccccCCCCCcccCCCCCcccCCH
Confidence 887 5 4999999999866 3456678999999999
Q ss_pred HHHhcCC-C-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 254 EVLIGAG-Y-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 254 E~~~~~~-~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|++.+.. | +.++||||+||++|.|++|+.||.+.+.. ...
T Consensus 191 Evl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~------~l~-------------------------------- 232 (370)
T KOG0583|consen 191 EVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP------NLY-------------------------------- 232 (370)
T ss_pred HHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH------HHH--------------------------------
Confidence 9999987 8 68999999999999999999999864421 111
Q ss_pred eccCCCcchhHHHHhhhccCChhh-HHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAE-ASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+....+.++.-. +..+.+|+++||..||.+|+|+.++++||||+.
T Consensus 233 ----------~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 233 ----------RKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ----------HHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 12333344455555 889999999999999999999999999999996
No 18
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.1e-46 Score=364.27 Aligned_cols=326 Identities=27% Similarity=0.460 Sum_probs=235.7
Q ss_pred CccccccCCee---CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccc
Q psy12288 16 GYCPVQIGDLF---NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAY 92 (393)
Q Consensus 16 ~~~~~~~~~~~---~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~ 92 (393)
+..++.+|+.+ .++|++.++||+|+||.||+|.+..+++.||||+++...........|+.+++.+.+.+..
T Consensus 114 ~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~----- 188 (467)
T PTZ00284 114 GHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPA----- 188 (467)
T ss_pred CceeEecCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcc-----
Confidence 34445555544 4789999999999999999999999999999999975444445667899999998655432
Q ss_pred cCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
.+.+++++.+.|. ....++++||++++++|.+.+... ..+++..+..++.||+.||+|||.++||+||||||
T Consensus 189 ---~~~~i~~i~~~~~---~~~~~~~iv~~~~g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP 260 (467)
T PTZ00284 189 ---DRFPLMKIQRYFQ---NETGHMCIVMPKYGPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKP 260 (467)
T ss_pred ---cCcceeeeEEEEE---cCCceEEEEEeccCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCH
Confidence 4566777777665 244679999999999999988765 34889999999999999999999744999999999
Q ss_pred CceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCch
Q psy12288 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRS 252 (393)
Q Consensus 173 ~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~a 252 (393)
+|||++.++..... .... ... .....+||+|||.+..........+||+.|+|
T Consensus 261 ~NILl~~~~~~~~~---------------------~~~~--~~~----~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~A 313 (467)
T PTZ00284 261 ENILMETSDTVVDP---------------------VTNR--ALP----PDPCRVRICDLGGCCDERHSRTAIVSTRHYRS 313 (467)
T ss_pred HHEEEecCCccccc---------------------cccc--ccC----CCCceEEECCCCccccCccccccccCCccccC
Confidence 99999765421000 0000 000 01125999999988765555556788999999
Q ss_pred hHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc--cccccCCCCCe
Q psy12288 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK--TLRYFTPQGNF 330 (393)
Q Consensus 253 PE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~--~~~~~~~~~~~ 330 (393)
||++.+..++.++|||||||++|||++|+.||...+ ..+++..+....|.+|..+...... ...+++..+..
T Consensus 314 PE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~------~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (467)
T PTZ00284 314 PEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD------NLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQL 387 (467)
T ss_pred cHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccc
Confidence 999999999999999999999999999999997655 6678888889999999877653211 11122221111
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.... .+....................+.+||.+||++||.+|||++|+|+||||...
T Consensus 388 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 388 RPCT--DPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY 444 (467)
T ss_pred cccC--CHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence 1000 00000000000000001234678899999999999999999999999999873
No 19
>KOG0595|consensus
Probab=100.00 E-value=1.2e-46 Score=338.81 Aligned_cols=258 Identities=27% Similarity=0.415 Sum_probs=211.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.+|.+.++||+|+||+||+|+++.++..||||.+.+. ....+.+..|+.+|+.+ .|+||+.++
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel--------------~H~nIV~l~ 75 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL--------------KHPNIVRLL 75 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc--------------CCcceeeEE
Confidence 4799999999999999999999999999999987643 33456678999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++.. .++++|+||||| ||+|..++.... +++++.++.++.||+.||++||++ +|+||||||+|||++.+...
T Consensus 76 d~~~----~~~~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~-~IiHRDLKPQNiLLs~~~~~ 148 (429)
T KOG0595|consen 76 DCIE----DDDFIYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHEN-NIIHRDLKPQNILLSTTARN 148 (429)
T ss_pred EEEe----cCCeEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCcceEEeccCCCC
Confidence 9998 778999999999 899999998763 599999999999999999999999 99999999999999765210
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~ 261 (393)
...+.+|++|||+|+.+... ..+.+|++.|||||++....|
T Consensus 149 -------------------------------------~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~Y 191 (429)
T KOG0595|consen 149 -------------------------------------DTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQY 191 (429)
T ss_pred -------------------------------------CCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccc
Confidence 00136999999999987543 456789999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||+|+++|+|++|+.||...+..+ .+..+.+-...+
T Consensus 192 dAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e------L~~~~~k~~~~~-------------------------------- 233 (429)
T KOG0595|consen 192 DAKADLWSIGTILYQCLTGKPPFDAETPKE------LLLYIKKGNEIV-------------------------------- 233 (429)
T ss_pred cchhhHHHHHHHHHHHHhCCCCccccCHHH------HHHHHhcccccc--------------------------------
Confidence 999999999999999999999998776332 111111110000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..++...++...+++...|..+|.+|.+..+-+.|+++..
T Consensus 234 -------~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 234 -------PVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAA 273 (429)
T ss_pred -------CchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence 0122445556668888999999999999999999988754
No 20
>KOG0658|consensus
Probab=100.00 E-value=4.8e-47 Score=337.83 Aligned_cols=286 Identities=28% Similarity=0.454 Sum_probs=234.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.-.|.-.+++|.|+||.||.|....+++.||||..-.+. ..-.+|+.+|+.+ .|+||+++.-.
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~---r~knrEl~im~~l--------------~HpNIV~L~~~ 85 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK---RYKNRELQIMRKL--------------DHPNIVRLLYF 85 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC---CcCcHHHHHHHhc--------------CCcCeeeEEEE
Confidence 347999999999999999999999999999999876543 3446899999988 99999999999
Q ss_pred ceeecCC-CeEEEEEEeeccccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 107 FKIYSRN-GTHICMVFEVMGYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 107 ~~~~~~~-~~~~~iv~e~~~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
|...... ..+..+||||++.+|.+.+... ....++.-.++-++.||+.||+|||+. |||||||||.|+|+|.+.
T Consensus 86 f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~-~IcHRDIKPqNlLvD~~t-- 162 (364)
T KOG0658|consen 86 FSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH-GICHRDIKPQNLLVDPDT-- 162 (364)
T ss_pred EEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc-CcccCCCChheEEEcCCC--
Confidence 9876555 3477799999999999998742 234578888999999999999999997 999999999999998763
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCC-
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~- 260 (393)
+.+||||||+|+.+. .+......|..|+|||.+.++.
T Consensus 163 ----------------------------------------g~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~ 202 (364)
T KOG0658|consen 163 ----------------------------------------GVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 202 (364)
T ss_pred ----------------------------------------CeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccc
Confidence 269999999998764 3445667799999999999974
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|+.+.||||.||++.||+-|++.|++.+ ..+++..|.+++|.+..+......-.+..+.- ..+.... |.
T Consensus 203 Yt~~IDiWSaGCV~aELl~g~plFpG~s------~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~----p~ik~~~-~~ 271 (364)
T KOG0658|consen 203 YTTSIDIWSAGCVMAELLKGQPLFPGDS------SVDQLVEIIKVLGTPTREDIKSMNPNYTEFKF----PQIKAHP-WH 271 (364)
T ss_pred cCceeEEhhhhHHHHHHhcCCcccCCCC------HHHHHHHHHHHhCCCCHHHHhhcCcccccccC----ccccccc-ce
Confidence 8999999999999999999999999988 88999999999999988887765544321111 1111000 00
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
+ .+....+++.++|+.++|.++|.+|.++.|++.||||...+.
T Consensus 272 --~------~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 272 --K------VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred --e------ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 0 133456788899999999999999999999999999987653
No 21
>KOG0033|consensus
Probab=100.00 E-value=1.1e-48 Score=329.53 Aligned_cols=261 Identities=26% Similarity=0.382 Sum_probs=218.9
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec---ccccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..|.+.|++.++||+|.|+.|+++.+..||+.+|+|++.. +....+.+.+|+++.+.+ .||||
T Consensus 7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L--------------qHP~I 72 (355)
T KOG0033|consen 7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL--------------QHPNI 72 (355)
T ss_pred cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhc--------------CCCcE
Confidence 3567899999999999999999999999999999998753 234567889999999999 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+... +..+.++|+|.+ |+++...+..+. -+++..+-.+++||+.||.|+|.+ +|+|||+||+|+++..
T Consensus 73 vrL~~ti~----~~~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n-~IvHRDvkP~nllLAS 145 (355)
T KOG0033|consen 73 VRLHDSIQ----EESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSN-GIVHRDLKPENLLLAS 145 (355)
T ss_pred eehhhhhc----ccceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeeee
Confidence 99999997 778899999999 888887776552 378888999999999999999999 9999999999999965
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~ 257 (393)
... ...+||+|||++...+. .....+|||.|||||++.
T Consensus 146 K~~----------------------------------------~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvr 185 (355)
T KOG0033|consen 146 KAK----------------------------------------GAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLK 185 (355)
T ss_pred ccC----------------------------------------CCceeecccceEEEeCCccccccccCCCcccCHHHhh
Confidence 443 22499999999987652 345678999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..+|+..+|||+.||++|-|+.|++||.+.+ ..+..++|+.-.-.+|..
T Consensus 186 kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~------~~rlye~I~~g~yd~~~~------------------------- 234 (355)
T KOG0033|consen 186 KDPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYEQIKAGAYDYPSP------------------------- 234 (355)
T ss_pred cCCCCCcchhhhhhHHHHHHHhCCCCCCCcc------HHHHHHHHhccccCCCCc-------------------------
Confidence 9999999999999999999999999998766 333444444322222221
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.++..++.+.+|+++||..||.+|+|+.|+|+|||+++.
T Consensus 235 -------------~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 235 -------------EWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred -------------ccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 125677889999999999999999999999999999875
No 22
>KOG0588|consensus
Probab=100.00 E-value=1.2e-46 Score=356.23 Aligned_cols=250 Identities=28% Similarity=0.478 Sum_probs=221.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
-|++.+.||.|+.|.|-+|.+..||+.+|||++.+. ......+.+|+.+|+.+ .|+|++.++
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi--------------~HpnVl~Ly 78 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI--------------EHPNVLRLY 78 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh--------------cCCCeeeee
Confidence 589999999999999999999999999999998643 34457788999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+++. +..++|+|.||+ +|.|++++.+. +++++.++.+++.||+.|+.|+|.. +||||||||+|+|++..+
T Consensus 79 dVwe----~~~~lylvlEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~-~icHRDLKpENlLLd~~~-- 149 (786)
T KOG0588|consen 79 DVWE----NKQHLYLVLEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAF-NICHRDLKPENLLLDVKN-- 149 (786)
T ss_pred eeec----cCceEEEEEEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhh-cceeccCCchhhhhhccc--
Confidence 9998 888999999999 99999999887 4599999999999999999999987 999999999999998877
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc--cCCCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+|++|||.|..- +.-..+.+|++.|.|||++.+.+|
T Consensus 150 -----------------------------------------nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pY 188 (786)
T KOG0588|consen 150 -----------------------------------------NIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPY 188 (786)
T ss_pred -----------------------------------------CEeeeccceeecccCCccccccCCCcccCCchhhcCCCC
Confidence 3999999988643 334567899999999999999998
Q ss_pred -CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 -GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 -~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++||||+|||||.|++|+.||.+.+.. ..
T Consensus 189 dG~~sDVWSCGVILfALLtG~LPFdDdNir------~L------------------------------------------ 220 (786)
T KOG0588|consen 189 DGRPSDVWSCGVILFALLTGKLPFDDDNIR------VL------------------------------------------ 220 (786)
T ss_pred CCCccccchhHHHHHHHHhCCCCCCCccHH------HH------------------------------------------
Confidence 89999999999999999999999865511 11
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..++.++.++.|...+.++.+||++||..||++|+|.+||++|||+.+..
T Consensus 221 LlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 221 LLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred HHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 22445566777888999999999999999999999999999999998764
No 23
>KOG0594|consensus
Probab=100.00 E-value=2.9e-46 Score=333.23 Aligned_cols=286 Identities=28% Similarity=0.463 Sum_probs=230.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccc-ceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK-VIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~-i~~~ 103 (393)
..|+.+++||+|+||.||+|+...+|+.||+|.+..+. .......+|+.+|+.+ .|+| ++++
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L--------------~~~~~iv~L 76 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRL--------------SHANHIVRL 76 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHh--------------CCCcceEEE
Confidence 46888899999999999999999999999999887543 3566779999999999 5666 8999
Q ss_pred cccceeecC--CCeEEEEEEeeccccHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 104 LNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDY--KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 104 ~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~--~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
.+++..... ....+++|||++..+|..++..... .+++...++.+|.||+.||+|||++ +|+||||||.||+++.
T Consensus 77 ~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~-~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 77 HDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH-GILHRDLKPQNLLISS 155 (323)
T ss_pred EeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCcceEEECC
Confidence 988874321 2347899999999999999987653 3577789999999999999999998 9999999999999988
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~ 256 (393)
++ .+||+|||+|+...-+ ..+.+.|.+|+|||++
T Consensus 156 ~G-------------------------------------------~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvL 192 (323)
T KOG0594|consen 156 SG-------------------------------------------VLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVL 192 (323)
T ss_pred CC-------------------------------------------cEeeeccchHHHhcCCcccccccEEEeeccCHHHh
Confidence 76 4999999999866532 4567889999999999
Q ss_pred hcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+. .|++..||||+|||+.||+++++.|++.+ +.+++..|.+++|......|......-++-.. ...
T Consensus 193 lGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s------e~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~------f~~ 260 (323)
T KOG0594|consen 193 LGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS------EIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAP------FPK 260 (323)
T ss_pred cCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc------HHHHHHHHHHHcCCCCccCCCCcccccccccc------CcC
Confidence 998 58999999999999999999999999988 68999999999999877666554432222110 000
Q ss_pred CC-cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LK-PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.. +....... ...+....+++.+||+++|.+|.||+.+|+||||....
T Consensus 261 ~~~~~~l~~~~-------~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 261 WPGPKDLSSIL-------PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred CCCccchHHhc-------cccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 00 00000111 12225788999999999999999999999999998764
No 24
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.8e-44 Score=333.00 Aligned_cols=278 Identities=27% Similarity=0.436 Sum_probs=218.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||.|+||.||+|++..++..||+|.++... .....+.+|+.+++.+ .|+|++++++
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~~~ 70 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL--------------KHANIVTLHD 70 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhC--------------CCCCEeeEEE
Confidence 47999999999999999999999999999999886432 2334667899999999 8999999998
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++|||++.+++.+.+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~---- 140 (288)
T cd07871 71 IIH----TERCLTLVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKR-KILHRDLKPQNLLINEKG---- 140 (288)
T ss_pred EEc----CCCeEEEEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCC----
Confidence 876 566799999999889988876543 3478899999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhc-CCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIG-AGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~ 261 (393)
.+||+|||++..... ......+++.|+|||++.+ ..+
T Consensus 141 ---------------------------------------~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 181 (288)
T cd07871 141 ---------------------------------------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEY 181 (288)
T ss_pred ---------------------------------------CEEECcCcceeeccCCCccccCceecccccChHHhcCCccc
Confidence 499999999875432 2234567899999999876 457
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++||||+||++|+|++|++||.+.+ ..+.+..+....+..+.+.+........+.... .+....
T Consensus 182 ~~~~DiwslG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--- 247 (288)
T cd07871 182 STPIDMWGVGCILYEMATGRPMFPGST------VKEELHLIFRLLGTPTEETWPGITSNEEFRSYL-----FPQYRA--- 247 (288)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChHHhhccccchhhhccc-----cCccCC---
Confidence 999999999999999999999997655 566777888888887776665433222111100 000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..........+..+.+||++||+.||.+|||++|+++||||
T Consensus 248 ----~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 248 ----QPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ----CchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 00011112345678899999999999999999999999998
No 25
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.2e-44 Score=331.05 Aligned_cols=280 Identities=28% Similarity=0.499 Sum_probs=219.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|++..+++.||+|++.... ...+.+.+|+.+++.+ .|+|++++.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 66 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL--------------KQENIVELK 66 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhC--------------CCccccchh
Confidence 37999999999999999999999999999999987532 2345677899999998 889999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+...++||||+.+++++.+.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nill~~~~--- 137 (287)
T cd07848 67 EAFR----RRGKLYLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLISHND--- 137 (287)
T ss_pred hhEe----cCCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCC---
Confidence 8887 567899999999777777665543 4588999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++...... .....+|+.|+|||++.+..
T Consensus 138 ----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 177 (287)
T cd07848 138 ----------------------------------------VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP 177 (287)
T ss_pred ----------------------------------------cEEEeeccCcccccccccccccccccccccCCcHHHcCCC
Confidence 4999999998765322 22346789999999999888
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+|||||++|+|++|++||.+.+ ..+.+..+....++.|............+... ..+......
T Consensus 178 ~~~~~DiwslGvil~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 246 (287)
T cd07848 178 YGKAVDMWSVGCILGELSDGQPLFPGES------EIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL-----RFPAVNHPQ 246 (287)
T ss_pred CCCchhHHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhhCCCCHHHHHhhhccchhccc-----ccCcccCcc
Confidence 9999999999999999999999998655 45566677778888887665432211111000 000000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.....+....+..+.+||++||+.||++|||++|+++||||
T Consensus 247 -----~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 247 -----SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred -----cHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00001123456789999999999999999999999999998
No 26
>KOG0582|consensus
Probab=100.00 E-value=1.3e-44 Score=328.50 Aligned_cols=265 Identities=27% Similarity=0.402 Sum_probs=218.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.+.|++.++||.|..+.||+|+...+++.||||++..+. ...+.+++|+..+..+ .||||++.+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~--------------~HPNIv~~~ 90 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI--------------DHPNIVTYH 90 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc--------------CCCCcceEE
Confidence 357999999999999999999999999999999987432 3357789999999999 999999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+|. .+..+|+||++| +|++++.+...-..++++..+..|.+++++||.|||.+ |.+|||||+.|||++.|+
T Consensus 91 ~sFv----v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~-G~IHRdvKAgnILi~~dG-- 163 (516)
T KOG0582|consen 91 CSFV----VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN-GHIHRDVKAGNILIDSDG-- 163 (516)
T ss_pred EEEE----ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc-CceecccccccEEEcCCC--
Confidence 9998 677899999999 89999999887777799999999999999999999998 999999999999999998
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHH
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVL 256 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~ 256 (393)
.++|+|||.+..+..+ ....+||+.|||||++
T Consensus 164 -----------------------------------------~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl 202 (516)
T KOG0582|consen 164 -----------------------------------------TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVL 202 (516)
T ss_pred -----------------------------------------cEEEcCceeeeeecccCceeeEeeccccCcccccChHHh
Confidence 4999999976554221 1455899999999996
Q ss_pred hc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 257 IG--AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 257 ~~--~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.. .+|+.++||||||++..||++|..||....+.. ..++++-+.+|...... ....
T Consensus 203 ~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk--------vLl~tLqn~pp~~~t~~-~~~d------------- 260 (516)
T KOG0582|consen 203 MQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK--------VLLLTLQNDPPTLLTSG-LDKD------------- 260 (516)
T ss_pred hhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH--------HHHHHhcCCCCCccccc-CChH-------------
Confidence 54 369999999999999999999999997655321 12344555555322110 0000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
+ ....+..|..++..||..||.+||||+++|+|+||+..+.
T Consensus 261 ------------~----~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 261 ------------E----DKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred ------------H----hhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 0 0233458999999999999999999999999999998764
No 27
>KOG0578|consensus
Probab=100.00 E-value=2.3e-45 Score=343.13 Aligned_cols=252 Identities=28% Similarity=0.473 Sum_probs=213.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
...|+...+||+|+.|.||.|....+++.||||.+..... ..+-+.+|+.+|+.. .|+|++.+++
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~--------------~H~NiVnfl~ 337 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDL--------------HHPNIVNFLD 337 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhc--------------cchHHHHHHH
Confidence 3589999999999999999999999999999999875443 345578999999999 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.|. .++.+|+||||+ +|+|.+.+... .+++.++..|+++++.||+|||.+ ||+|||||.+|||+..++
T Consensus 338 Syl----v~deLWVVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~-gIiHrDIKSDnILL~~~g--- 406 (550)
T KOG0578|consen 338 SYL----VGDELWVVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHAR-GIIHRDIKSDNILLTMDG--- 406 (550)
T ss_pred Hhc----ccceeEEEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhc-ceeeeccccceeEeccCC---
Confidence 998 557899999999 78877777553 389999999999999999999999 999999999999998888
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||++..+.. .....+||++|||||+.....|
T Consensus 407 ----------------------------------------~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~Y 446 (550)
T KOG0578|consen 407 ----------------------------------------SVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPY 446 (550)
T ss_pred ----------------------------------------cEEEeeeeeeeccccccCccccccCCCCccchhhhhhccc
Confidence 499999999887643 4566799999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
++++||||||++.+||+-|++||--.+ ...++..|.. .|.
T Consensus 447 G~KVDIWSLGIMaIEMveGEPPYlnE~------PlrAlyLIa~-ng~--------------------------------- 486 (550)
T KOG0578|consen 447 GPKVDIWSLGIMAIEMVEGEPPYLNEN------PLRALYLIAT-NGT--------------------------------- 486 (550)
T ss_pred CccccchhhhhHHHHHhcCCCCccCCC------hHHHHHHHhh-cCC---------------------------------
Confidence 999999999999999999999996433 2222222221 121
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+.+..+...+..|.+|+.+||+.|+++|++|.|||+||||+.
T Consensus 487 -----P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 487 -----PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred -----CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 122234667899999999999999999999999999999964
No 28
>KOG0597|consensus
Probab=100.00 E-value=3.9e-45 Score=339.86 Aligned_cols=250 Identities=25% Similarity=0.456 Sum_probs=214.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|.+.+.||+|+||.||+|+.+.|.+.||+|.+.+.. .....+.+|+++++.+ .|+||+.++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l--------------kHpniv~m~ 67 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL--------------KHPNIVEML 67 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc--------------CCcchhhHH
Confidence 47999999999999999999999999999999886432 3345688999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.|. +..++|+|+||+.|+|...+... +.++++.++.++.+++.||.|||++ +|+|||+||.|||++.++
T Consensus 68 esfE----t~~~~~vVte~a~g~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~-rilhrd~kPqniLl~~~~--- 137 (808)
T KOG0597|consen 68 ESFE----TSAHLWVVTEYAVGDLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSN-RILHRDMKPQNILLEKGG--- 137 (808)
T ss_pred Hhhc----ccceEEEEehhhhhhHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceeeecCCC---
Confidence 9998 78899999999988999888665 4499999999999999999999998 999999999999998877
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+|+||||+++-.+... ....|||.|||||+..+.+|
T Consensus 138 ----------------------------------------~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~py 177 (808)
T KOG0597|consen 138 ----------------------------------------TLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPY 177 (808)
T ss_pred ----------------------------------------ceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCc
Confidence 49999999998765432 23468999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+..+|+|||||++||+++|++||...+ +....+
T Consensus 178 d~~sDlWslGcilYE~~~G~PPF~a~s----------i~~Lv~------------------------------------- 210 (808)
T KOG0597|consen 178 DHTSDLWSLGCILYELYVGQPPFYARS----------ITQLVK------------------------------------- 210 (808)
T ss_pred cchhhHHHHHHHHHHHhcCCCCchHHH----------HHHHHH-------------------------------------
Confidence 999999999999999999999996433 111111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+......++...+..|..|+..+|..||.+|+|+.+++.|||.++.
T Consensus 211 -~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 211 -SILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred -HHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 22223334556788999999999999999999999999999998763
No 29
>KOG0694|consensus
Probab=100.00 E-value=2.6e-44 Score=342.47 Aligned_cols=251 Identities=22% Similarity=0.351 Sum_probs=215.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|.++++||+|+||.|++|..+.+++.+|||++++.... .+....|-+++.... .||.++.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-------------~HPFL~~ 433 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-------------RHPFLVN 433 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-------------cCCeEee
Confidence 46899999999999999999999999999999999976433 355677888888872 6999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++.+|+ ...+++.||||+ ||+ .-.+.. ...|++..++.++..|+.||.|||++ ||++||||.+|||+|.++
T Consensus 434 L~~~fQ----T~~~l~fvmey~~Ggd-m~~~~~--~~~F~e~rarfyaAev~l~L~fLH~~-~IIYRDlKLdNiLLD~eG 505 (694)
T KOG0694|consen 434 LFSCFQ----TKEHLFFVMEYVAGGD-LMHHIH--TDVFSEPRARFYAAEVVLGLQFLHEN-GIIYRDLKLDNLLLDTEG 505 (694)
T ss_pred cccccc----cCCeEEEEEEecCCCc-EEEEEe--cccccHHHHHHHHHHHHHHHHHHHhc-CceeeecchhheEEcccC
Confidence 999999 888999999999 666 323322 24599999999999999999999999 999999999999999988
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~ 258 (393)
. +||+|||+++.. +....+.+||+.|+|||++.+
T Consensus 506 h-------------------------------------------~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e 542 (694)
T KOG0694|consen 506 H-------------------------------------------VKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTE 542 (694)
T ss_pred c-------------------------------------------EEecccccccccCCCCCccccccCChhhcChhhhcc
Confidence 4 999999999753 455677899999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..|+.++|.|||||++|||+.|+.||++.+ +.+....|.-
T Consensus 543 ~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd------Eee~FdsI~~---------------------------------- 582 (694)
T KOG0694|consen 543 QSYTRAVDWWGLGVLLYEMLVGESPFPGDD------EEEVFDSIVN---------------------------------- 582 (694)
T ss_pred CcccchhhHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHhc----------------------------------
Confidence 999999999999999999999999999877 4445444432
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....+|...+.+++++|+++|+.||++|+. +.+|..||||+.+
T Consensus 583 --------d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 583 --------DEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred --------CCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 223355667889999999999999999995 6899999999976
No 30
>KOG0591|consensus
Probab=100.00 E-value=6.3e-46 Score=318.76 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=211.0
Q ss_pred ccccccccCCCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec---ccccchhhHHHHHHHH
Q psy12288 3 FDQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLK 79 (393)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~ 79 (393)
++.++..+.+.+.++.|+. +|++.++||+|.||.||++.+..+|..||.|.++. +....+....|+.+|+
T Consensus 1 M~~~~~~~~~~~~~~~~l~-------~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLk 73 (375)
T KOG0591|consen 1 MDKQSSAMMDFSPPQKTLA-------DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLK 73 (375)
T ss_pred CCcccccccCCCCCcccHH-------HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHH
Confidence 3566777777776555544 59999999999999999999999999999998763 3344577789999999
Q ss_pred HhcccCCCCcccccCcccccceeccc-cceeecCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHH
Q psy12288 80 AVGRKSNVHSSAYNTQASEKVIRLLN-DFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEG 155 (393)
Q Consensus 80 ~l~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~ 155 (393)
.+ .||||++.++ .|. +++.-+.||||+| .|+|...+...+ ...+++..+++++.|++.|
T Consensus 74 QL--------------~HpNIVqYy~~~f~---~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~A 136 (375)
T KOG0591|consen 74 QL--------------NHPNIVQYYAHSFI---EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRA 136 (375)
T ss_pred hc--------------CCchHHHHHHHhhh---ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHH
Confidence 99 9999999998 554 2333488999999 889988886533 3458999999999999999
Q ss_pred HHHhhh--cCC--eeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeec
Q psy12288 156 LNYLHT--QCR--IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231 (393)
Q Consensus 156 l~~lH~--~~~--i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~df 231 (393)
|..+|. . + |+||||||.||+++.++ .+||+||
T Consensus 137 L~~cH~~~~-r~~VmHRDIKPaNIFl~~~g-------------------------------------------vvKLGDf 172 (375)
T KOG0591|consen 137 LYHCHSKIP-RGTVMHRDIKPANIFLTANG-------------------------------------------VVKLGDF 172 (375)
T ss_pred HHHHhcccc-ccceeeccCcchheEEcCCC-------------------------------------------ceeeccc
Confidence 999998 3 4 99999999999998877 4999999
Q ss_pred CccccccCC---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCC
Q psy12288 232 GNACWIDDH---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGP 308 (393)
Q Consensus 232 g~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~ 308 (393)
|+++.+.+. ....+|||.||+||.+...+|++++||||+||++|||+.-.+||.+.+ ...+...+.-...
T Consensus 173 GL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-------~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 173 GLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-------LLSLCKKIEQGDY 245 (375)
T ss_pred hhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc-------HHHHHHHHHcCCC
Confidence 999987654 345789999999999999999999999999999999999999998764 1122222221111
Q ss_pred CChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC-hhhHHHHHHHHHhccccCCCCCcCH
Q psy12288 309 IPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS-KAEASDFADFLLPMLHVNQKLRASA 377 (393)
Q Consensus 309 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~ 377 (393)
| ++| .-.|..+..+|.-|++.||+.||+.
T Consensus 246 -~---------------------------------------~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 246 -P---------------------------------------PLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred -C---------------------------------------CCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 0 123 4578899999999999999999985
No 31
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=6e-44 Score=339.35 Aligned_cols=303 Identities=29% Similarity=0.446 Sum_probs=225.5
Q ss_pred CccccccCC---eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCc
Q psy12288 16 GYCPVQIGD---LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 16 ~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
+++++.+|+ .+.++|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------- 73 (355)
T cd07874 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------- 73 (355)
T ss_pred cceeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh--------
Confidence 456788887 35789999999999999999999999999999999886432 2235567899999998
Q ss_pred ccccCcccccceeccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
.|+|++++++.+..... .....++||||+++++...+.. .++...+..++.|++.||+|||++ |++|
T Consensus 74 ------~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~-givH 142 (355)
T cd07874 74 ------NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA-GIIH 142 (355)
T ss_pred ------CCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC-Cccc
Confidence 88999999988763221 2346899999998888887754 278899999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEI 245 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~ 245 (393)
|||||+||+++.++ .++|+|||+++..... .....
T Consensus 143 rDikp~Nill~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~ 179 (355)
T cd07874 143 RDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTAGTSFMMTPYV 179 (355)
T ss_pred CCCChHHEEECCCC-------------------------------------------CEEEeeCcccccCCCccccCCcc
Confidence 99999999998776 4999999998765433 23457
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.. .......+....+....+...........+.
T Consensus 180 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (355)
T cd07874 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD------YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253 (355)
T ss_pred ccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhcHHHHHHH
Confidence 8999999999999889999999999999999999999997654 4555666666666555444433222111110
Q ss_pred -CCCCee--eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 326 -PQGNFR--RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 326 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...... ..+...+. .........+...+..+.+||.+||..||++|||+.|+++||||...
T Consensus 254 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 254 ENRPKYAGLTFPKLFPD---SLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred hcCCccccccchhhccc---cccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 000000 00000000 00000011122345678899999999999999999999999999754
No 32
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-43 Score=328.42 Aligned_cols=285 Identities=26% Similarity=0.418 Sum_probs=215.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||+|++.... .......+|+.+++.+ .|+|++++.+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~~~ 70 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL--------------KHANIVLLHD 70 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhC--------------CCCCcCeEEE
Confidence 68999999999999999999999999999999987432 2234567899999998 8899999998
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++||||+++++.+.+.... ..++.+.++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~---- 140 (303)
T cd07869 71 IIH----TKETLTLVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQR-YILHRDLKPQNLLISDTG---- 140 (303)
T ss_pred EEe----cCCeEEEEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC----
Confidence 887 567899999999999988886543 4588999999999999999999998 999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++..... ......+|+.|+|||++.+. .+
T Consensus 141 ---------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 181 (303)
T cd07869 141 ---------------------------------------ELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEY 181 (303)
T ss_pred ---------------------------------------CEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCC
Confidence 499999998865432 22345678999999998764 47
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|..||.+.. .....+..+....+......+...... ..+.+.. .....+...
T Consensus 182 ~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~ 251 (303)
T cd07869 182 STCLDMWGVGCIFVEMIQGVAAFPGMK-----DIQDQLERIFLVLGTPNEDTWPGVHSL-PHFKPER----FTLYSPKNL 251 (303)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCc-----cHHHHHHHHHHHhCCCChhhccchhhc-ccccccc----ccccCCccH
Confidence 889999999999999999999997643 144566666666665443332221111 0011100 000001111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...... ...+..+.+|+.+||+.||++|||+.|+++||||+++.
T Consensus 252 ~~~~~~-----~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 252 RQAWNK-----LSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred HHHhhc-----cCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 111110 11345778999999999999999999999999999864
No 33
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.7e-44 Score=339.53 Aligned_cols=303 Identities=29% Similarity=0.441 Sum_probs=226.1
Q ss_pred CCccccccCC---eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCC
Q psy12288 15 GGYCPVQIGD---LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVH 88 (393)
Q Consensus 15 ~~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~ 88 (393)
+.++++..++ .+.++|++.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------- 77 (359)
T cd07876 5 SQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV------- 77 (359)
T ss_pred CCcceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC-------
Confidence 5567777777 5678999999999999999999999999999999998643 22345567899999988
Q ss_pred cccccCcccccceeccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 89 SSAYNTQASEKVIRLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
.|+|++++++.+..... ....+++||||+++++...+.. .++...+..++.|++.||+|||++ |++
T Consensus 78 -------~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~-~iv 145 (359)
T cd07876 78 -------NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA-GII 145 (359)
T ss_pred -------CCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC-Ccc
Confidence 89999999988763221 2245899999998888877643 378899999999999999999998 999
Q ss_pred eccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCC
Q psy12288 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADE 244 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~ 244 (393)
||||||+||+++.++ .++|+|||++...... ....
T Consensus 146 HrDlkp~NIl~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~ 182 (359)
T cd07876 146 HRDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTACTNFMMTPY 182 (359)
T ss_pred cCCCCHHHEEECCCC-------------------------------------------CEEEecCCCccccccCccCCCC
Confidence 999999999998776 4999999998754322 3345
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
.+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+ ..+....+....+..+.............+
T Consensus 183 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (359)
T cd07876 183 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD------HIDQWNKVIEQLGTPSAEFMNRLQPTVRNY 256 (359)
T ss_pred cccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 78999999999999889999999999999999999999998654 455666677777766655443322111110
Q ss_pred CCC---CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 325 TPQ---GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 325 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
... ..........+.. ............+..+.+||.+||..||++|||+.|+++||||..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 257 VENRPQYPGISFEELFPDW---IFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HhhCCCCCCcchhhhcccc---ccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 000 0000000000000 000000111234567889999999999999999999999999975
No 34
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2e-43 Score=343.87 Aligned_cols=287 Identities=22% Similarity=0.385 Sum_probs=220.3
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
....+|++.++||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.+ .|+|++++.
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l--------------~h~niv~l~ 125 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNL--------------NHINIIFLK 125 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhc--------------CCCCCccee
Confidence 34568999999999999999999999999999999876432 3456799999998 889999988
Q ss_pred ccceeec----CCCeEEEEEEeeccccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 105 NDFKIYS----RNGTHICMVFEVMGYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 105 ~~~~~~~----~~~~~~~iv~e~~~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
+.+.... ....++++||||+++++.+.+.. .....+++..++.++.||+.||+|||+. ||+||||||+|||++
T Consensus 126 ~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~-~IiHrDLKp~NILl~ 204 (440)
T PTZ00036 126 DYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK-FICHRDLKPQNLLID 204 (440)
T ss_pred eeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCcCHHHEEEc
Confidence 7764321 22346789999998888777653 2234588999999999999999999998 999999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVL 256 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~ 256 (393)
.++. .+||+|||+++.... ......+|+.|+|||++
T Consensus 205 ~~~~------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~ 242 (440)
T PTZ00036 205 PNTH------------------------------------------TLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELM 242 (440)
T ss_pred CCCC------------------------------------------ceeeeccccchhccCCCCcccCCCCcCccCHHHh
Confidence 5542 489999999976532 23345789999999998
Q ss_pred hcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+. .++.++|||||||++|+|++|.+||.+.+ ..+++..+....|..+.+........+.. ...+.
T Consensus 243 ~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~------~~~~~~~i~~~~~~p~~~~~~~~~~~~~~-------~~~~~ 309 (440)
T PTZ00036 243 LGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS------SVDQLVRIIQVLGTPTEDQLKEMNPNYAD-------IKFPD 309 (440)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhchhhhc-------ccCCc
Confidence 765 58999999999999999999999998766 56678888888887666554322111100 00011
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
........ .++...+..+.+||.+||..||.+|||+.|+++||||.+.+
T Consensus 310 ~~~~~l~~------~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 310 VKPKDLKK------VFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred cCchhHHH------HhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 11111111 12344567899999999999999999999999999998764
No 35
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.6e-44 Score=329.36 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=208.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~~ 66 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV--------------SHPFIIRL 66 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC--------------CCCcHhhh
Confidence 47999999999999999999999999999999986432 2235577899999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. ++..+++||||+ +++|.+++... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~NIli~~~~- 138 (291)
T cd05612 67 FWTEH----DQRFLYMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSK-EIVYRDLKPENILLDKEG- 138 (291)
T ss_pred Hhhhc----cCCeEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCC-
Confidence 88876 667899999999 78888888665 3488999999999999999999998 999999999999997766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...........||+.|+|||++.+..++
T Consensus 139 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 176 (291)
T cd05612 139 ------------------------------------------HIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHN 176 (291)
T ss_pred ------------------------------------------CEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCC
Confidence 49999999988765555556789999999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|+.||...+ .......+.
T Consensus 177 ~~~DiwSlG~il~~l~~g~~pf~~~~------~~~~~~~i~--------------------------------------- 211 (291)
T cd05612 177 KAVDWWALGILIYEMLVGYPPFFDDN------PFGIYEKIL--------------------------------------- 211 (291)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHH---------------------------------------
Confidence 99999999999999999999997544 111111111
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
.....++...+..+.++|++||..||.+||+ ++++++||||+..
T Consensus 212 ---~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 212 ---AGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred ---hCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 1112233445678889999999999999995 9999999999864
No 36
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.3e-43 Score=333.04 Aligned_cols=284 Identities=28% Similarity=0.424 Sum_probs=217.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.++||+|+||.||+|.+..+++.||||.+.... .....+.+|+.+++.+ .|+|++++.+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~~~~ 66 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL--------------RHPDIVEIKH 66 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC--------------CCCCEeeecc
Confidence 6999999999999999999999999999999886421 2234567899999998 8999999988
Q ss_pred cceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
++..... ....+++||||++++|.+.+... ..+++..+..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~--- 140 (338)
T cd07859 67 IMLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNILANADC--- 140 (338)
T ss_pred eEeccCCCCCceEEEEEecCCCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCC---
Confidence 7753322 22468999999999999888654 3489999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++...... .....+|+.|+|||++.+
T Consensus 141 ----------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 180 (338)
T cd07859 141 ----------------------------------------KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 180 (338)
T ss_pred ----------------------------------------cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhc
Confidence 4999999998754211 123468999999999876
Q ss_pred --CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc--cccCCCCCeeecc
Q psy12288 259 --AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL--RYFTPQGNFRRID 334 (393)
Q Consensus 259 --~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~ 334 (393)
..++.++|||||||++|+|++|++||.+.+ ...++..+....|..+........... .++. ...
T Consensus 181 ~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~ 248 (338)
T cd07859 181 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN------VVHQLDLITDLLGTPSPETISRVRNEKARRYLS------SMR 248 (338)
T ss_pred cccccCchhHHHHHHHHHHHHHcCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHH------hhc
Confidence 568999999999999999999999997655 455666777777776665544322110 0000 000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
...+... ... + ...+..+.++|.+||..||++|||++|+++||||++...
T Consensus 249 ~~~~~~~----~~~--~-~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 249 KKQPVPF----SQK--F-PNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred ccCCCch----HHh--c-CCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0000000 000 0 124567789999999999999999999999999987643
No 37
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.3e-43 Score=335.39 Aligned_cols=304 Identities=30% Similarity=0.459 Sum_probs=224.1
Q ss_pred CCccccccCC---eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCC
Q psy12288 15 GGYCPVQIGD---LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVH 88 (393)
Q Consensus 15 ~~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~ 88 (393)
+...++..++ .+.++|++.+.||+|+||.||+|.+..+++.||||.+... ......+.+|+.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l------- 80 (364)
T cd07875 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV------- 80 (364)
T ss_pred ccceeeecCcchhchhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-------
Confidence 3445555555 2467999999999999999999999999999999988643 22345567899999988
Q ss_pred cccccCcccccceeccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 89 SSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
.|+|++++++.+.... .....+++||||+++++...+.. .++...+..++.|++.||+|||++ |++
T Consensus 81 -------~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~-~iv 148 (364)
T cd07875 81 -------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA-GII 148 (364)
T ss_pred -------CCCCccccceeecccccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC-Cee
Confidence 7899999888775322 13346899999998888887753 278889999999999999999998 999
Q ss_pred eccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCC
Q psy12288 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADE 244 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~ 244 (393)
||||||+||+++.++ .++|+|||+++..... ....
T Consensus 149 H~Dlkp~NIll~~~~-------------------------------------------~~kL~DfG~a~~~~~~~~~~~~ 185 (364)
T cd07875 149 HRDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTAGTSFMMTPY 185 (364)
T ss_pred cCCCCHHHEEECCCC-------------------------------------------cEEEEeCCCccccCCCCcccCC
Confidence 999999999998766 4999999999765433 2345
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
.+|..|+|||++.+..++.++|||||||++|+|++|+.||.+.+ .......+....+..+.++..........+
T Consensus 186 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (364)
T cd07875 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD------HIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259 (364)
T ss_pred cccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHhhhHHHHHH
Confidence 78999999999999989999999999999999999999997655 455666666666665554443322211111
Q ss_pred CCCCC-ee--eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 325 TPQGN-FR--RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 325 ~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..+.. .. ......+.. ............+..+.+||.+||..||.+|||+.|+|+||||...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 260 VENRPKYAGYSFEKLFPDV---LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred HhhCCCcCCCChHhhCccc---cccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 00000 00 000000000 0000011112235678899999999999999999999999999753
No 38
>KOG0032|consensus
Probab=100.00 E-value=2.5e-43 Score=331.69 Aligned_cols=264 Identities=25% Similarity=0.442 Sum_probs=221.4
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
....+...|++.+.||+|.||.||+|.+..||+.+|+|++.+... ..+.+.+|+.+|+.+. .|
T Consensus 29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~-------------~h 95 (382)
T KOG0032|consen 29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS-------------GH 95 (382)
T ss_pred ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc-------------CC
Confidence 556677899999999999999999999999999999999875433 2357899999999993 49
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+|++.+.+.|. ....+++|||++ ||.|++.+... .+++..+..++.|++.|+.|||+. |++||||||+|+|
T Consensus 96 pniv~l~~~~e----~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~-gvvHrDlKpEN~L 167 (382)
T KOG0032|consen 96 PNIVQLKDAFE----DPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL-GVVHRDLKPENLL 167 (382)
T ss_pred CCEEEEEEEEE----cCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCHHHee
Confidence 99999999998 667899999999 89999999887 299999999999999999999997 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhH
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVE 254 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE 254 (393)
+...... .+.++++|||++..... .....+||+.|+|||
T Consensus 168 ~~~~~~~---------------------------------------~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APE 208 (382)
T KOG0032|consen 168 LASKDEG---------------------------------------SGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPE 208 (382)
T ss_pred eccccCC---------------------------------------CCcEEEeeCCCceEccCCceEeeecCCccccCch
Confidence 9655310 12599999999987655 345678999999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++...+|+..+||||+||++|.|++|.+||.+.+.. .....+....-.++
T Consensus 209 vl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~------~~~~~i~~~~~~f~------------------------ 258 (382)
T KOG0032|consen 209 VLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF------EIFLAILRGDFDFT------------------------ 258 (382)
T ss_pred hhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh------HHHHHHHcCCCCCC------------------------
Confidence 999999999999999999999999999999877632 22222211111111
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+.+...+..+.+||++||..||.+|+|+.++|+|||+++.
T Consensus 259 --------------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 259 --------------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred --------------CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 11235678899999999999999999999999999999875
No 39
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=9e-44 Score=334.53 Aligned_cols=251 Identities=20% Similarity=0.330 Sum_probs=208.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|+|+++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~ 82 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL--------------SHPFIVN 82 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC--------------CCCCCCc
Confidence 368999999999999999999999999999999987532 2235577899999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. .+...++||||+ +++|.+.+... ..++++.+..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 83 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~ 155 (329)
T PTZ00263 83 MMCSFQ----DENRVYFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSK-DIIYRDLKPENLLLDNKG 155 (329)
T ss_pred EEEEEE----cCCEEEEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEECCCC
Confidence 998887 667899999999 78888888764 3488999999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...........||+.|+|||++.+..+
T Consensus 156 -------------------------------------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 192 (329)
T PTZ00263 156 -------------------------------------------HVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGH 192 (329)
T ss_pred -------------------------------------------CEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCC
Confidence 4999999999876655556678999999999999889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|..||.+.+. ......+.
T Consensus 193 ~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~-------------------------------------- 228 (329)
T PTZ00263 193 GKAVDWWTMGVLLYEFIAGYPPFFDDTP------FRIYEKIL-------------------------------------- 228 (329)
T ss_pred CCcceeechHHHHHHHHcCCCCCCCCCH------HHHHHHHh--------------------------------------
Confidence 9999999999999999999999965431 11111111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||++||..||.+||+ ++++++||||++.
T Consensus 229 ----~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 229 ----AGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred ----cCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 1111223345567889999999999999997 7999999999874
No 40
>KOG0198|consensus
Probab=100.00 E-value=6e-44 Score=323.59 Aligned_cols=257 Identities=25% Similarity=0.363 Sum_probs=206.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++...+.||+|+||.||++.+..+|+..|||.+..... ..+.+.+|+.+|..+ .|++||+.++.
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l--------------~~p~IV~~~G~ 82 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRL--------------NHPNIVQYYGS 82 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhC--------------CCCCEEeeCCc
Confidence 468889999999999999999999999999998775421 145689999999999 79999999997
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee-chhHH
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV-DYDKV 184 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~-~~~~~ 184 (393)
..... +..+.+.|||+ +|+|.+++.+... .+++..++.+..|+++||+|||++ |++|+||||+|||++. ++
T Consensus 83 ~~~~~--~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~-g~vH~DiK~~NiLl~~~~~--- 155 (313)
T KOG0198|consen 83 SSSRE--NDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK-GIVHCDIKPANILLDPSNG--- 155 (313)
T ss_pred ccccc--CeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC-CEeccCcccceEEEeCCCC---
Confidence 54222 14789999999 8899999988764 699999999999999999999998 9999999999999987 45
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------CCCCCCCCCCCchhHHHhc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------HFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------~~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||++..... ......||+.|||||++..
T Consensus 156 ----------------------------------------~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~ 195 (313)
T KOG0198|consen 156 ----------------------------------------DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRN 195 (313)
T ss_pred ----------------------------------------eEEeccCccccccccccccccccccccCCccccCchhhcC
Confidence 499999998886652 1335689999999999996
Q ss_pred CC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+. ..+++|||||||++.||+||+.||... ......+......
T Consensus 196 g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--------~~~~~~~~~ig~~----------------------------- 238 (313)
T KOG0198|consen 196 GEVARRESDIWSLGCTVVEMLTGKPPWSEF--------FEEAEALLLIGRE----------------------------- 238 (313)
T ss_pred CCcCCccchhhhcCCEEEeccCCCCcchhh--------cchHHHHHHHhcc-----------------------------
Confidence 32 235999999999999999999999642 0111111111100
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+++...+..+.+|+.+|+..||++||||+++|+|||.++..
T Consensus 239 --------~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 239 --------DSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred --------CCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 001134566788899999999999999999999999999997643
No 41
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=7.6e-43 Score=322.40 Aligned_cols=282 Identities=26% Similarity=0.442 Sum_probs=214.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-CCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+.. ++..||+|.+..... ......+|+.+++.+... .|+|++++
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~-----------~hpniv~~ 69 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF-----------EHPNVVRL 69 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhccc-----------CCCCcceE
Confidence 479999999999999999999865 468899998864322 223456788887776321 68999999
Q ss_pred cccceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+.... .....+++|||++++++.+++.......+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 70 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~iiH~dlkp~Nil~~~~~- 147 (290)
T cd07862 70 FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSG- 147 (290)
T ss_pred EEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEcCCC-
Confidence 98875332 234578999999998999988765555688999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++...... .....+|+.|+|||.+.+..
T Consensus 148 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 185 (290)
T cd07862 148 ------------------------------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 185 (290)
T ss_pred ------------------------------------------CEEEccccceEeccCCcccccccccccccChHHHhCCC
Confidence 4999999998755332 23446799999999999888
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc-ccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT-LRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|||||||++|+|++|.+||.+.+ ..+.+..+....+..+...+...... ...+. .....
T Consensus 186 ~~~~~DiwslG~il~el~~g~~~f~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 250 (290)
T cd07862 186 YATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALPRQAFH---------SKSAQ 250 (290)
T ss_pred CCCccchHHHHHHHHHHHcCCCCcCCCC------HHHHHHHHHHHhCCCChhhchhhhcccchhcc---------CCCCC
Confidence 9999999999999999999999998765 55667777776665443322111110 00000 00000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
... .+....+..+.+++.+||+.||++|||+.|+++||||
T Consensus 251 ~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 251 PIE-------KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred CHH-------HHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 000 0112356778899999999999999999999999998
No 42
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-43 Score=337.07 Aligned_cols=289 Identities=25% Similarity=0.360 Sum_probs=218.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+|++.++||+|+||.||+|.+..+++.||+|... ...+.+|+.+++.+ .|+||+++++.
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l--------------~HpnIv~~~~~ 151 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAI--------------NHPSIIQLKGT 151 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhC--------------CCCCCCCEeEE
Confidence 358999999999999999999999999999999754 24567899999999 89999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
|. .+...++++|++++++...+... ..++..+++.++.|++.||+|||++ ||+||||||+||+++.++
T Consensus 152 ~~----~~~~~~lv~e~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~-~IvHrDiKP~NIll~~~~----- 219 (391)
T PHA03212 152 FT----YNKFTCLILPRYKTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFINHPG----- 219 (391)
T ss_pred EE----ECCeeEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHhEEEcCCC-----
Confidence 87 56679999999998998888664 3488999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++..... ......||+.|+|||++.+..++
T Consensus 220 --------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 261 (391)
T PHA03212 220 --------------------------------------DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYG 261 (391)
T ss_pred --------------------------------------CEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCC
Confidence 499999999864321 22235789999999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCC-CCCCcHHHHHHHHHHhCCCChHHHhcCccccc-cc-CCCCCeeeccCCCcc
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGK-EYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR-YF-TPQGNFRRIDNLKPW 339 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 339 (393)
.++|||||||++|+|++|..||...... .......++..+....|..|.+.......... .+ .........+...+
T Consensus 262 ~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 340 (391)
T PHA03212 262 PAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRP- 340 (391)
T ss_pred cHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCC-
Confidence 9999999999999999999887544322 12234567778888888766543211100000 00 00000000000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSHY 393 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~ 393 (393)
.... ....+..+.+||.+||++||++|||++|+|+||||......|
T Consensus 341 -~~~~-------~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~ 386 (391)
T PHA03212 341 -LWTN-------LYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPY 386 (391)
T ss_pred -CHHH-------HhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCC
Confidence 0000 012456788999999999999999999999999999876544
No 43
>KOG0585|consensus
Probab=100.00 E-value=4.2e-44 Score=327.16 Aligned_cols=253 Identities=26% Similarity=0.440 Sum_probs=204.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---------------ccchhhHHHHHHHHHhcccCCCCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---------------VYADTARDEIVLLKAVGRKSNVHSSA 91 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~E~~~l~~l~~~~~~~~~~ 91 (393)
-+.|++.+.||+|.||.|-+|++..+++.||||++.+.. ...++.++|+.+|+++
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl---------- 165 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL---------- 165 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc----------
Confidence 458999999999999999999999999999999986421 1125789999999999
Q ss_pred ccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 92 ~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
.|+|||+++.+.. ++..+.+|||+||| .|.+.. ... ....+++.++++++++++.||+|||.+ ||+||||
T Consensus 166 ----~H~nVV~LiEvLD--DP~s~~~YlVley~s~G~v~w-~p~-d~~els~~~Ar~ylrDvv~GLEYLH~Q-giiHRDI 236 (576)
T KOG0585|consen 166 ----HHPNVVKLIEVLD--DPESDKLYLVLEYCSKGEVKW-CPP-DKPELSEQQARKYLRDVVLGLEYLHYQ-GIIHRDI 236 (576)
T ss_pred ----CCcCeeEEEEeec--CcccCceEEEEEeccCCcccc-CCC-CcccccHHHHHHHHHHHHHHHHHHHhc-Ceecccc
Confidence 8999999999887 44677899999999 444332 211 112288999999999999999999999 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--------CCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--------HFA 242 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--------~~~ 242 (393)
||+|+|++.++ ++|++|||.+..... ...
T Consensus 237 KPsNLLl~~~g-------------------------------------------~VKIsDFGVs~~~~~~~~~~~d~~L~ 273 (576)
T KOG0585|consen 237 KPSNLLLSSDG-------------------------------------------TVKISDFGVSNEFPQGSDEGSDDQLS 273 (576)
T ss_pred chhheEEcCCC-------------------------------------------cEEeeccceeeecccCCccccHHHHh
Confidence 99999999887 599999998875421 123
Q ss_pred CCCCCCCCchhHHHhcCC----CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 243 DEIQTRQYRSVEVLIGAG----YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~----~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
..+|||.|+|||.+.+.. .+.+.||||+||++|+|+.|+.||.+.. ..+....|+
T Consensus 274 ~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~------~~~l~~KIv--------------- 332 (576)
T KOG0585|consen 274 RTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF------ELELFDKIV--------------- 332 (576)
T ss_pred hcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch------HHHHHHHHh---------------
Confidence 458999999999998832 3789999999999999999999997655 223333332
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhhccCCh--hhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSK--AEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...+.|+. +....+.|||.+||+.||++|++..++..|||...-
T Consensus 333 ---------------------------n~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 333 ---------------------------NDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred ---------------------------cCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 22223332 357788999999999999999999999999998643
No 44
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.7e-42 Score=319.64 Aligned_cols=281 Identities=28% Similarity=0.461 Sum_probs=215.8
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|+||.||+|++..+++.||+|.++... .......+|+.+++.+... .|+|++++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~-----------~h~ni~~~~~ 69 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAF-----------DHPNIVRLMD 69 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhc-----------CCCCeeeeee
Confidence 5899999999999999999999999999999887432 1223456788888777321 6899999998
Q ss_pred cceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+.... ......+++||++.+++..++.......++++.++.++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 70 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~--- 145 (288)
T cd07863 70 VCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGG--- 145 (288)
T ss_pred eeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCC---
Confidence 876432 235678999999988998888765555689999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...... .....+|..|+|||++.+..++
T Consensus 146 ----------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 185 (288)
T cd07863 146 ----------------------------------------QVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYA 185 (288)
T ss_pred ----------------------------------------CEEECccCccccccCcccCCCccccccccCchHhhCCCCC
Confidence 4999999998765432 2345678999999999988899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc-ccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT-LRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|||||||++|+|++|.+||...+ ..+.+..+....+..+...+...... ...+.. .....
T Consensus 186 ~~~DiwslG~~l~~l~~g~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~- 249 (288)
T cd07863 186 TPVDMWSVGCIFAEMFRRKPLFCGNS------EADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSP---------RGPRP- 249 (288)
T ss_pred CcchhhhHHHHHHHHHhCCcCcCCCC------HHHHHHHHHHHhCCCChhhCcccccccccccCC---------CCCCc-
Confidence 99999999999999999999997654 55667777776665444332211110 000000 00000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...+....+..+.++|.+||+.||++|||+.|++.||||
T Consensus 250 ------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 250 ------VQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ------hHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 001112455678899999999999999999999999998
No 45
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.2e-42 Score=322.31 Aligned_cols=282 Identities=27% Similarity=0.445 Sum_probs=219.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|++..+++.||+|.++... .....+.+|+.+++.+ .|+|++++++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 71 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDL--------------KHANIVTLHD 71 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhC--------------CCCCcceEEE
Confidence 57999999999999999999999999999999887432 2234567899999998 7899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .+...++||||+++++...+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 72 ~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~dlkp~Nill~~~~---- 141 (309)
T cd07872 72 IVH----TDKSLTLVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLINERG---- 141 (309)
T ss_pred EEe----eCCeEEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC----
Confidence 887 566799999999889988876543 3478899999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++...... .....+|+.|+|||.+.+. .+
T Consensus 142 ---------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 182 (309)
T cd07872 142 ---------------------------------------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEY 182 (309)
T ss_pred ---------------------------------------CEEECccccceecCCCccccccccccccccCCHHHhCCCCC
Confidence 4999999998754322 2334678999999998764 57
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|+.||.+.+ ..+.+..+....+..+...+........+.+. .. +...+..
T Consensus 183 ~~~~DiwslG~il~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~- 250 (309)
T cd07872 183 STQIDMWGVGCIFFEMASGRPLFPGST------VEDELHLIFRLLGTPTEETWPGISSNDEFKNY--NF---PKYKPQP- 250 (309)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh--hc---CccCCCc-
Confidence 899999999999999999999997665 45667777888887766555432221111100 00 0000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
........+..+.++|++||..||.+|||+.|+++||||+...
T Consensus 251 ------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 251 ------LINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred ------hhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 0001123466788999999999999999999999999999754
No 46
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7e-43 Score=329.46 Aligned_cols=260 Identities=23% Similarity=0.329 Sum_probs=211.2
Q ss_pred cccccCCeeCCeEEEEEEecccCceEEEEEEeCCCC-ceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccc
Q psy12288 18 CPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDK-TFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAY 92 (393)
Q Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~ 92 (393)
.|......-.++|++.+.||+|+||.||+|.+..++ ..||+|.+.... ...+.+.+|+.+++.+
T Consensus 20 ~~~~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l----------- 88 (340)
T PTZ00426 20 EPKRKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI----------- 88 (340)
T ss_pred ccccCCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----------
Confidence 344455555678999999999999999999876654 689999886432 2234567899999998
Q ss_pred cCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCC
Q psy12288 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171 (393)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlk 171 (393)
.|+|++++++.+. .+...++||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. |++|||||
T Consensus 89 ---~hp~Iv~~~~~~~----~~~~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLk 158 (340)
T PTZ00426 89 ---NHPFCVNLYGSFK----DESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSL-NIVYRDLK 158 (340)
T ss_pred ---CCCCCcceEEEEE----eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCC
Confidence 8999999999887 667899999999 78888888665 3488999999999999999999998 99999999
Q ss_pred CCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCc
Q psy12288 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYR 251 (393)
Q Consensus 172 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~ 251 (393)
|+|||++.++ .++|+|||++...........||+.|+
T Consensus 159 p~NILl~~~~-------------------------------------------~ikL~DFG~a~~~~~~~~~~~gt~~y~ 195 (340)
T PTZ00426 159 PENLLLDKDG-------------------------------------------FIKMTDFGFAKVVDTRTYTLCGTPEYI 195 (340)
T ss_pred HHHEEECCCC-------------------------------------------CEEEecCCCCeecCCCcceecCChhhc
Confidence 9999998766 499999999887655555667899999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||++.+..++.++|+|||||++|+|++|..||...+ .......+..
T Consensus 196 aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~i~~--------------------------- 242 (340)
T PTZ00426 196 APEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE------PLLIYQKILE--------------------------- 242 (340)
T ss_pred CHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC------HHHHHHHHhc---------------------------
Confidence 9999999889999999999999999999999997544 1111121111
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
....++...+..+.++|++||..||++|+ +++++++||||++.
T Consensus 243 ---------------~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 243 ---------------GIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred ---------------CCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 11112234456778999999999999995 89999999999875
No 47
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=8.2e-43 Score=321.51 Aligned_cols=255 Identities=25% Similarity=0.340 Sum_probs=204.0
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
|++.+.||+|+||.||+|.+..+++.||+|.+..... ....+.+|+.+++.+ .|++++++.+
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~~~~iv~~~~ 67 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV--------------NSRFVVSLAY 67 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc--------------CCCcEEEEEE
Confidence 8889999999999999999999999999998864321 123456899999998 7889999888
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|...+.......+++..+..++.|++.||+|||+. |++||||||+||+++.++
T Consensus 68 ~~~----~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nill~~~~--- 139 (285)
T cd05631 68 AYE----TKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-RIVYRDLKPENILLDDRG--- 139 (285)
T ss_pred EEc----cCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCC---
Confidence 876 567899999999 67887776554434588999999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++..... ......||..|+|||++.+..++
T Consensus 140 ----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~ 179 (285)
T cd05631 140 ----------------------------------------HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYT 179 (285)
T ss_pred ----------------------------------------CEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCC
Confidence 499999999876532 22345689999999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|+.||....... ....+....
T Consensus 180 ~~~DvwslGvil~el~~g~~pf~~~~~~~------~~~~~~~~~------------------------------------ 217 (285)
T cd05631 180 FSPDWWGLGCLIYEMIQGQSPFRKRKERV------KREEVDRRV------------------------------------ 217 (285)
T ss_pred cccCchhHHHHHHHHHhCCCCCCCCCcch------hHHHHHHHh------------------------------------
Confidence 99999999999999999999997544211 001111100
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPRR 390 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~~ 390 (393)
......++...+..+.+||++||+.||.+||+ ++++++||||.+..
T Consensus 218 --~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 218 --KEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred --hcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 00111223455678899999999999999997 89999999999864
No 48
>KOG0604|consensus
Probab=100.00 E-value=1.2e-43 Score=307.13 Aligned_cols=266 Identities=22% Similarity=0.311 Sum_probs=219.3
Q ss_pred eCCeEEEEE-EecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 26 FNFRYHVIR-KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 26 ~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.++|++.. +||-|-.|.|-.|.++.|++.+|+|++.. .++.++|+++.-..+ .|+|||.++
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D----s~KARrEVeLHw~~s-------------~h~~iV~Ii 121 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD----SPKARREVELHWMAS-------------GHPHIVSII 121 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc----CHHHHhHhhhhhhhc-------------CCCceEEee
Confidence 556888765 88999999999999999999999998874 467788888766653 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++|.........+.+|||.+ ||.|+..+..+....+++.++..|+.||..|+.|||+. +|.||||||+|+|....+.
T Consensus 122 dVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~-nIAHRDlKpENLLyt~t~~- 199 (400)
T KOG0604|consen 122 DVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM-NIAHRDLKPENLLYTTTSP- 199 (400)
T ss_pred hhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc-chhhccCChhheeeecCCC-
Confidence 99997766777899999999 99999999998878899999999999999999999998 9999999999999976553
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
+..+||+|||+|+.-. ......+-|+.|.|||++....|
T Consensus 200 ---------------------------------------na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKy 240 (400)
T KOG0604|consen 200 ---------------------------------------NAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKY 240 (400)
T ss_pred ---------------------------------------CcceEecccccccccCCCccccCCcccccccCHHHhCchhc
Confidence 2259999999998654 33445677999999999998899
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
...+|+||+||++|-|++|++||.+........ .--.+|..---.+|.+-
T Consensus 241 dkscdmwSlgVimYIlLCGyPPFYS~hg~aisp--gMk~rI~~gqy~FP~pE---------------------------- 290 (400)
T KOG0604|consen 241 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKRRIRTGQYEFPEPE---------------------------- 290 (400)
T ss_pred CCCCCccchhHHHHHhhcCCCcccccCCccCCh--hHHhHhhccCccCCChh----------------------------
Confidence 999999999999999999999998776543211 11111111001122221
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
++.+|....|+|+++|..+|++|+|+.|+++|||++.-
T Consensus 291 ----------Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 291 ----------WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred ----------HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 15789999999999999999999999999999999763
No 49
>KOG0599|consensus
Probab=100.00 E-value=2.3e-44 Score=307.96 Aligned_cols=254 Identities=26% Similarity=0.456 Sum_probs=209.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---------ccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
.+|.-.+.||.|..+.|-++.+..|+..+|+|++.... ...+.-.+|+.+|+++. +||
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~-------------GHP 83 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM-------------GHP 83 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc-------------CCC
Confidence 47888899999999999999999999999999875321 11244467999999994 899
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
+|+.+.+.+. .+.++++|++.| .|.|++++.+. -++++.+.++||+|++.|++|||.+ .||||||||+|||+
T Consensus 84 ~II~l~D~ye----s~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~-~IVHRDLKpENILl 156 (411)
T KOG0599|consen 84 YIIDLQDVYE----SDAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHAR-NIVHRDLKPENILL 156 (411)
T ss_pred cEEEeeeecc----CcchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHh-hhhhcccChhheee
Confidence 9999999998 788899999999 89999999765 3589999999999999999999998 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEV 255 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~ 255 (393)
+++. +++++|||+++.+. ......+|||.|.|||.
T Consensus 157 ddn~-------------------------------------------~i~isDFGFa~~l~~GekLrelCGTPgYLAPEt 193 (411)
T KOG0599|consen 157 DDNM-------------------------------------------NIKISDFGFACQLEPGEKLRELCGTPGYLAPET 193 (411)
T ss_pred cccc-------------------------------------------ceEEeccceeeccCCchhHHHhcCCCcccChhh
Confidence 9887 49999999998764 34556799999999999
Q ss_pred Hhc------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 256 LIG------AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 256 ~~~------~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
+.. .+|+..+|+|++||+||-|+.|.+||.... ....+..|+. |. +.+-+++
T Consensus 194 ikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk------QmlMLR~Ime--Gk------------yqF~spe-- 251 (411)
T KOG0599|consen 194 IKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK------QMLMLRMIME--GK------------YQFRSPE-- 251 (411)
T ss_pred eeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH------HHHHHHHHHh--cc------------cccCCcc--
Confidence 864 358999999999999999999999997432 2222222222 11 1111111
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+.+.+....+||++||..||.+|+|++|+|.||||..
T Consensus 252 ----------------------Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 252 ----------------------WADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred ----------------------hhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 2567788899999999999999999999999999943
No 50
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=6e-42 Score=318.20 Aligned_cols=285 Identities=26% Similarity=0.450 Sum_probs=219.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~nI~~~~~ 71 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL--------------KHANIVTLHD 71 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc--------------CCCCcceEEE
Confidence 57999999999999999999999999999999886432 2234567899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++||||+++++...+.... ..++...+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 72 ~~~----~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~-~i~H~dlkp~Nil~~~~~---- 141 (301)
T cd07873 72 IIH----TEKSLTLVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDLKPQNLLINERG---- 141 (301)
T ss_pred EEe----cCCeEEEEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHHHEEECCCC----
Confidence 887 567799999999889888876543 3588999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++...... .....+++.|+|||.+.+. .+
T Consensus 142 ---------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 182 (301)
T cd07873 142 ---------------------------------------ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDY 182 (301)
T ss_pred ---------------------------------------cEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCC
Confidence 4999999988754322 2234568899999998764 47
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|++||...+ ....+..+....+..+...+........+... .......
T Consensus 183 ~~~~Dv~slG~~l~el~tg~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--- 248 (301)
T cd07873 183 STQIDMWGVGCIFYEMSTGRPLFPGST------VEEQLHFIFRILGTPTEETWPGILSNEEFKSY-----NYPKYRA--- 248 (301)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCChhhchhhhcccccccc-----ccCcccc---
Confidence 889999999999999999999997654 44566666777666555444322111110000 0000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSHY 393 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~ 393 (393)
.... ......+..+.+||.+||+.||.+|||++|+++||||.+..+.|
T Consensus 249 -~~~~---~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~ 296 (301)
T cd07873 249 -DCLH---NHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERI 296 (301)
T ss_pred -ccHH---hhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchh
Confidence 0000 11123456788999999999999999999999999999887654
No 51
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.8e-42 Score=327.60 Aligned_cols=303 Identities=31% Similarity=0.470 Sum_probs=229.7
Q ss_pred CccccccCC---eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCc
Q psy12288 16 GYCPVQIGD---LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 16 ~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
+|+|+.+|+ .+.++|++.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------- 72 (353)
T cd07850 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-------- 72 (353)
T ss_pred CceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc--------
Confidence 689999999 5689999999999999999999999999999999988642 22234566899999998
Q ss_pred ccccCcccccceeccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
.|+|++++++.+.... .+....++||||+++++.+.+... ++...+..++.|++.||++||++ |++|
T Consensus 73 ------~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~-gi~H 141 (353)
T cd07850 73 ------NHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA-GIIH 141 (353)
T ss_pred ------CCCCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC-Ceee
Confidence 7899999988775322 123468999999988988887543 78899999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEI 245 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~ 245 (393)
+||||+||+++.++ .++|+|||++....... ....
T Consensus 142 ~dlkp~Nil~~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~ 178 (353)
T cd07850 142 RDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTAGTSFMMTPYV 178 (353)
T ss_pred CCCCHHHEEECCCC-------------------------------------------CEEEccCccceeCCCCCCCCCCc
Confidence 99999999998766 49999999988654332 2345
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
++..|+|||.+.+..++.++|||||||++|+|++|+.||...+ .......+....|..+.++..........+.
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (353)
T cd07850 179 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTD------HIDQWNKIIEQLGTPSDEFMSRLQPTVRNYV 252 (353)
T ss_pred ccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHhhhhhhHHh
Confidence 7889999999999999999999999999999999999997654 4556777777777777665544332222211
Q ss_pred CCCCeee---ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 326 PQGNFRR---IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 326 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....... .....+...+. ......+...+..+.++|.+||..||++|||+.|+|+||||+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 253 ENRPKYAGYSFEELFPDVLFP--PDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred hcCCCCCCcchhhhCcccccC--cccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 1110000 00000000000 0000012245677889999999999999999999999999974
No 52
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2e-42 Score=330.95 Aligned_cols=286 Identities=30% Similarity=0.459 Sum_probs=218.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.++||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~~~ 66 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF--------------KHDNVLSALD 66 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC--------------CCCCcCCHhh
Confidence 4788999999999999999999999999999886421 2235677899999998 8899999999
Q ss_pred cceeecCC-CeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRN-GTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~-~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+...... ....++||||+++++...+... ..++...++.++.||+.||+|||+. |++||||||+||+++.++
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nili~~~~--- 140 (372)
T cd07853 67 ILQPPHIDPFEEIYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNC--- 140 (372)
T ss_pred eecCCCccccceEEEEeeccccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHHEEECCCC---
Confidence 88632211 1278999999988888887654 3589999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++...... .....+|+.|+|||.+.+..
T Consensus 141 ----------------------------------------~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 180 (372)
T cd07853 141 ----------------------------------------VLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSR 180 (372)
T ss_pred ----------------------------------------CEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCC
Confidence 4999999998754321 22346788999999998754
Q ss_pred -CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 -YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 -~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|||||||++|+|++|+.||.+.+ ...++..+....|..+.+................ ....+
T Consensus 181 ~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 248 (372)
T cd07853 181 HYTSAVDIWSVGCIFAELLGRRILFQAQS------PIQQLDLITDLLGTPSLEAMRSACEGARAHILRG-----PHKPP- 248 (372)
T ss_pred CCCcHHHHHhHHHHHHHHHcCCCCCCCCC------HHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhC-----CCCCC-
Confidence 7899999999999999999999998765 5667888888888766654432211100000000 00000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.......+....+..+.+||.+||..||.+|||+.|+++||||++.+
T Consensus 249 ----~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 249 ----SLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred ----chHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 01111123344567889999999999999999999999999998854
No 53
>KOG0662|consensus
Probab=100.00 E-value=4.5e-43 Score=282.90 Aligned_cols=280 Identities=29% Similarity=0.458 Sum_probs=231.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|+-.++||+|+||.||+|+++.+++.||+|.+..+ ........+|+-+|+.+ .|.||+++++
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkel--------------khknivrl~d 68 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL--------------KHKNIVRLHD 68 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh--------------hhcceeehhh
Confidence 577789999999999999999999999999998743 34456778999999999 8899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
... ++..+.+|+|+|..+|..++.+.+ +.+..+.++.+|.|++.||.|+|++ ++.|||+||.|.+++.++.
T Consensus 69 vlh----sdkkltlvfe~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchsh-nvlhrdlkpqnllin~nge--- 139 (292)
T KOG0662|consen 69 VLH----SDKKLTLVFEFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSH-NVLHRDLKPQNLLINRNGE--- 139 (292)
T ss_pred hhc----cCceeEEeHHHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcceEEeccCCc---
Confidence 987 677899999999999999998765 4589999999999999999999998 9999999999999998884
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCC-C
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAG-Y 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~-~ 261 (393)
+||.|||+++-++.+. +..+-|.+|++|.++.+.. |
T Consensus 140 ----------------------------------------lkladfglarafgipvrcysaevvtlwyrppdvlfgakly 179 (292)
T KOG0662|consen 140 ----------------------------------------LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179 (292)
T ss_pred ----------------------------------------EEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehh
Confidence 9999999999887664 3456799999999999986 7
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+++.|+||.||++.|+.. |.+.|++.. -.+++.+|.+++|....+.|....+..++- ..+......
T Consensus 180 ~tsidmwsagcifaelanagrplfpg~d------vddqlkrif~~lg~p~ed~wps~t~lpdyk-------~yp~ypatt 246 (292)
T KOG0662|consen 180 STSIDMWSAGCIFAELANAGRPLFPGND------VDDQLKRIFRLLGTPTEDQWPSMTKLPDYK-------PYPIYPATT 246 (292)
T ss_pred ccchHhhhcchHHHHHhhcCCCCCCCCc------HHHHHHHHHHHhCCCccccCCccccCCCCc-------ccCCccccc
Confidence 999999999999999988 888898877 789999999999988776665544332221 111111111
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+. ...+..-.|++.++|.-+|..|++++.+++||||.+..
T Consensus 247 swsqiv------p~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 247 SWSQIV------PKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred hHHHHh------hhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 111111 22334567999999999999999999999999999865
No 54
>KOG4717|consensus
Probab=100.00 E-value=7.8e-43 Score=321.27 Aligned_cols=257 Identities=24% Similarity=0.437 Sum_probs=224.5
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
-|+.-|++.+.||+|.|++|-+|++..||+.||||++.++ ......+.+|+++|+.+ .||||+
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV--------------QHpNiV 80 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV--------------QHPNIV 80 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh--------------cCcCee
Confidence 3556799999999999999999999999999999998754 34456788999999999 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++.+.. ....+|+|+|+- +|+|++++.+.. .+++++.+.+++.||+.|+.|+|+- .+|||||||+|+.+...
T Consensus 81 RLYEViD----TQTKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqL-HVVHRDLKPENVVFFEK 154 (864)
T KOG4717|consen 81 RLYEVID----TQTKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQL-HVVHRDLKPENVVFFEK 154 (864)
T ss_pred eeeehhc----ccceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhh-hhhcccCCcceeEEeee
Confidence 9999887 667899999999 789999998876 4599999999999999999999986 99999999999988654
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc--cCCCCCCCCCCCCchhHHHhc
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~--~~~~~~~~~t~~y~aPE~~~~ 258 (393)
.. -+||+|||++..+ +......+|++.|.|||++.+
T Consensus 155 lG------------------------------------------lVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLG 192 (864)
T KOG4717|consen 155 LG------------------------------------------LVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLG 192 (864)
T ss_pred cC------------------------------------------ceEeeeccccccCCCcchhhcccchhhccCchhhhc
Confidence 32 4999999998765 455677899999999999999
Q ss_pred CCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
-.| .+++||||||||+|.|++|++||..++ +.+.+.+|+++--.
T Consensus 193 DsYDAPAVDiWSLGVILyMLVCGq~PFqeAN------DSETLTmImDCKYt----------------------------- 237 (864)
T KOG4717|consen 193 DSYDAPAVDIWSLGVILYMLVCGQPPFQEAN------DSETLTMIMDCKYT----------------------------- 237 (864)
T ss_pred CccCCcchhhhHHHHHHHHHHhCCCcccccc------chhhhhhhhccccc-----------------------------
Confidence 988 689999999999999999999999888 55666666665444
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.|+.++.+..+||..||..||.+|.+.++|..|+|+..+..
T Consensus 238 -------------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 238 -------------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred -------------CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 45567788999999999999999999999999999998753
No 55
>KOG0610|consensus
Probab=100.00 E-value=7.1e-43 Score=314.69 Aligned_cols=287 Identities=23% Similarity=0.316 Sum_probs=216.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-+.|++++.||.|.-|.||+|+...++..+|+|++.+... ...+.+.|-++|..+ +||.++.
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l--------------DHPFlPT 141 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL--------------DHPFLPT 141 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc--------------CCCccch
Confidence 3689999999999999999999999999999999976532 235567788999999 9999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++..|. ...+.|++|||| ||+|..+..++....++++.++.++.+++.||+|||.. |||+|||||+|||+.+|+
T Consensus 142 LYa~fe----t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml-GivYRDLKPENILvredG 216 (459)
T KOG0610|consen 142 LYASFE----TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML-GIVYRDLKPENILVREDG 216 (459)
T ss_pred hhheee----ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh-ceeeccCCcceeEEecCC
Confidence 999998 888999999999 99999999999888999999999999999999999987 999999999999998887
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCC--CCcccccceEEE----------------eecCcc--------c
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLD--PANEVYDISVKI----------------ADLGNA--------C 235 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~kl----------------~dfg~~--------~ 235 (393)
. .-...+..+..++..++....+... .....+.. +.. .|.+.. .
T Consensus 217 H---------IMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~-~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~ae 286 (459)
T KOG0610|consen 217 H---------IMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRS-RQPSCFSPRCLSSSKKRKKKDESASRSLPELVAE 286 (459)
T ss_pred c---------EEeeeccccccCCCCCeeeccCCCCCCCCCccccc-ccccccccchhccccccccccccccccchhhhcC
Confidence 5 1112222222222212211111000 00000000 000 122211 0
Q ss_pred cccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHh
Q psy12288 236 WIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315 (393)
Q Consensus 236 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 315 (393)
..+......+||-.|.|||++.+.+.+.++|+|+||+++|||+.|.-||.+.+..+ .+..+
T Consensus 287 p~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~------Tl~NI------------- 347 (459)
T KOG0610|consen 287 PTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE------TLRNI------------- 347 (459)
T ss_pred CCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh------hHHHH-------------
Confidence 01111234589999999999999999999999999999999999999999887433 33322
Q ss_pred cCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCCCcC----HHHHhcCCCCCCC
Q psy12288 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKLRAS----AADCLRHPWLNPR 389 (393)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~~ 389 (393)
+.+...|+ ...+..+.|||+++|..||++|+. |.||-+||||+++
T Consensus 348 -----------------------------v~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 348 -----------------------------VGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred -----------------------------hcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence 22222222 256788999999999999999998 9999999999987
Q ss_pred C
Q psy12288 390 R 390 (393)
Q Consensus 390 ~ 390 (393)
.
T Consensus 399 n 399 (459)
T KOG0610|consen 399 N 399 (459)
T ss_pred C
Confidence 3
No 56
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.5e-42 Score=325.35 Aligned_cols=244 Identities=23% Similarity=0.349 Sum_probs=198.5
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|+++... .....+.+|+.+++.+ .|++++++.+.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~hp~i~~~~~~~~- 65 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT--------------RHPFLTALKYSFQ- 65 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC--------------CCCCCCCEEEEEE-
Confidence 36899999999999999999999999987532 2234556788889888 7899999988887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+...++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+||+++.++
T Consensus 66 ---~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-~ivHrDlkp~NIll~~~~------- 132 (323)
T cd05571 66 ---THDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSC-DVVYRDLKLENLMLDKDG------- 132 (323)
T ss_pred ---cCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCC-------
Confidence 667899999999 77887777654 3488999999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 133 ------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 176 (323)
T cd05571 133 ------------------------------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 176 (323)
T ss_pred ------------------------------------CEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccc
Confidence 49999999987532 223345689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|..||...+. ......+ .
T Consensus 177 DiwSlG~il~elltg~~Pf~~~~~------~~~~~~~------------------------------------------~ 208 (323)
T cd05571 177 DWWGLGVVMYEMMCGRLPFYNQDH------EKLFELI------------------------------------------L 208 (323)
T ss_pred cCcccchhhhhhhcCCCCCCCCCH------HHHHHHH------------------------------------------H
Confidence 999999999999999999965431 1111111 0
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||++||..||++|| ++.++++||||.+.
T Consensus 209 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 209 MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred cCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 111123345567889999999999999999 89999999999875
No 57
>KOG0670|consensus
Probab=100.00 E-value=4.5e-43 Score=323.09 Aligned_cols=312 Identities=31% Similarity=0.540 Sum_probs=259.5
Q ss_pred CccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
||+-+++|+++..+|.|....|+|=|+.|-+|.+...+..||||++.++......-..|+++|+.|.....-
T Consensus 420 GYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~E-------- 491 (752)
T KOG0670|consen 420 GYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPE-------- 491 (752)
T ss_pred ceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCch--------
Confidence 788889999999999999999999999999999999999999999998887778889999999999766543
Q ss_pred ccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSD-YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
...|+++++..|. ..+++|+|||-+.-+|.+++.... .-++....++.++.|++.||..|-. |||+|.||||+|
T Consensus 492 dk~Hclrl~r~F~----hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDN 566 (752)
T KOG0670|consen 492 DKFHCLRLFRHFK----HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDN 566 (752)
T ss_pred hhhHHHHHHHHhh----hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccc
Confidence 4567888888887 788999999999999999987643 3358889999999999999999985 699999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-CCCCCCCCCchh
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-ADEIQTRQYRSV 253 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~t~~y~aP 253 (393)
|||+...+ .+||||||.|...+.+. .++.-+..|+||
T Consensus 567 iLVNE~k~------------------------------------------iLKLCDfGSA~~~~eneitPYLVSRFYRaP 604 (752)
T KOG0670|consen 567 ILVNESKN------------------------------------------ILKLCDFGSASFASENEITPYLVSRFYRAP 604 (752)
T ss_pred eEeccCcc------------------------------------------eeeeccCccccccccccccHHHHHHhccCc
Confidence 99976543 69999999998765543 344446779999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+.+|....|+||+||++|||+||+..|++.+ ....+...+++-|++|..++..+....+-|+.+=++-.+
T Consensus 605 EIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~T------NN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~ 678 (752)
T KOG0670|consen 605 EIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRT------NNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYI 678 (752)
T ss_pred ceeecCcccCCccceeeceeeEEeeccceecCCCC------cHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEE
Confidence 99999999999999999999999999999999988 777888999999999999999988777777776555332
Q ss_pred cC--------------CCc-chhHHHHhhhccCChh---hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 334 DN--------------LKP-WGLYQVLTEKYHWSKA---EASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 334 ~~--------------~~~-~~~~~~~~~~~~~~~~---~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.. .++ .-+...+.....++.+ .-.+|.+|+.+||.+||++|.|+.|+|.||||..
T Consensus 679 e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 679 EVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred eccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 22 222 1111222221123333 3478889999999999999999999999999964
No 58
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.8e-42 Score=325.07 Aligned_cols=258 Identities=22% Similarity=0.331 Sum_probs=207.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+|++.++||+|+||.||+|.+..+++.||+|+++... .....+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~iv~~ 66 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT--------------KSEWLVKL 66 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC--------------CCCCCccE
Confidence 36999999999999999999999999999999987542 2234567788888888 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.+.++||||+ +++|.+.+... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~- 138 (333)
T cd05600 67 LYAFQ----DDEYLYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHEL-GYIHRDLKPENFLIDASG- 138 (333)
T ss_pred EEEEE----cCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCC-
Confidence 98887 677899999999 78888888654 3488999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...........||+.|+|||++.+..++
T Consensus 139 ------------------------------------------~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 176 (333)
T cd05600 139 ------------------------------------------HIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYD 176 (333)
T ss_pred ------------------------------------------CEEEEeCcCCcccccccCCcccCccccChhHhcCCCCC
Confidence 49999999988765555566789999999999998999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|..||...+ ..+....+........ .+..
T Consensus 177 ~~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~--------------~~~~-------------- 222 (333)
T cd05600 177 FTVDYWSLGCMLYEFLCGFPPFSGST------PNETWENLKYWKETLQ--------------RPVY-------------- 222 (333)
T ss_pred CccceecchHHHhhhhhCCCCCCCCC------HHHHHHHHHhcccccc--------------CCCC--------------
Confidence 99999999999999999999997544 2222222211100000 0000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.......+..+.++|.+||..+|.+||+++++++||||++.
T Consensus 223 ------~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 223 ------DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred ------CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 00001345678899999999999999999999999999975
No 59
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=7e-42 Score=323.67 Aligned_cols=286 Identities=29% Similarity=0.461 Sum_probs=219.7
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~ 78 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM--------------KHENVIG 78 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc--------------CCCchhh
Confidence 4568999999999999999999999999999999886432 2234567899999998 7899999
Q ss_pred ccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++++.... ......+++++++++++...+.. ..+++..+..++.|++.||+|||++ |++||||||+||+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrdikp~Nil~~~~ 154 (343)
T cd07878 79 LLDVFTPATSIENFNEVYLVTNLMGADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA-GIIHRDLKPSNVAVNED 154 (343)
T ss_pred hhhhhcccccccccCcEEEEeecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCChhhEEECCC
Confidence 998875322 12345799999999998877654 3489999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-C
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-A 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~ 259 (393)
+ .++|+|||++...........+|+.|+|||++.+ .
T Consensus 155 ~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 191 (343)
T cd07878 155 C-------------------------------------------ELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWM 191 (343)
T ss_pred C-------------------------------------------CEEEcCCccceecCCCcCCccccccccCchHhcCCc
Confidence 6 4999999999877666666678999999999987 4
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc-cccCCCCCeeeccCCCc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL-RYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 338 (393)
.++.++|||||||++|+|++|+.||...+ ....+..+....+..+........... +.+. ...+....
T Consensus 192 ~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 260 (343)
T cd07878 192 HYNQTVDIWSVGCIMAELLKGKALFPGND------YIDQLKRIMEVVGTPSPEVLKKISSEHARKYI-----QSLPHMPQ 260 (343)
T ss_pred cCCchhhhHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhcchhhHHHHh-----hccccccc
Confidence 57899999999999999999999997654 456667777777766655543221110 0000 00000000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
. .+.. .....+..+.+||.+||..||.+|||+.|+++||||....
T Consensus 261 ~----~~~~---~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~ 305 (343)
T cd07878 261 Q----DLKK---IFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305 (343)
T ss_pred h----hHHH---hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence 0 0000 0112345678999999999999999999999999998754
No 60
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.8e-42 Score=327.17 Aligned_cols=251 Identities=18% Similarity=0.347 Sum_probs=199.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+ .|++++++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~--------------~~~~iv~~ 66 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA--------------DSLWVVKM 66 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC--------------CCCCcceE
Confidence 47999999999999999999999999999999987532 2234567888888888 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. ....+++||||+ +++|.+.+... ..+++..++.++.|++.||+|||++ ||+||||||+|||++.++
T Consensus 67 ~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~-givHrDlKp~NILi~~~~- 138 (363)
T cd05628 67 FYSFQ----DKLNLYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQL-GFIHRDIKPDNLLLDSKG- 138 (363)
T ss_pred EEEEe----cCCeEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCC-
Confidence 98887 667899999999 78888888664 3589999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------------- 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------------- 240 (393)
.++|+|||++......
T Consensus 139 ------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (363)
T cd05628 139 ------------------------------------------HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNM 176 (363)
T ss_pred ------------------------------------------CEEEeeccCccccccccccccccccccccccccccccc
Confidence 4999999988643211
Q ss_pred ----------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH
Q psy12288 241 ----------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304 (393)
Q Consensus 241 ----------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 304 (393)
....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+ .......+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~------~~~~~~~i~~ 250 (363)
T cd05628 177 NSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET------PQETYKKVMN 250 (363)
T ss_pred ccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHc
Confidence 113468999999999999999999999999999999999999997654 2222222221
Q ss_pred HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCC---CcCHHH
Q psy12288 305 LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKL---RASAAD 379 (393)
Q Consensus 305 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~---Rpt~~e 379 (393)
....+ .++ ...+..+.++|.+|++ +|.+ ||+++|
T Consensus 251 ~~~~~----------------------------------------~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~e 289 (363)
T cd05628 251 WKETL----------------------------------------IFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEE 289 (363)
T ss_pred CcCcc----------------------------------------cCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHH
Confidence 10100 011 1245677899998776 4554 589999
Q ss_pred HhcCCCCCCC
Q psy12288 380 CLRHPWLNPR 389 (393)
Q Consensus 380 ll~hp~~~~~ 389 (393)
+++||||+++
T Consensus 290 i~~hp~f~~~ 299 (363)
T cd05628 290 IKTNPFFEGV 299 (363)
T ss_pred HhCCCCCCCC
Confidence 9999999876
No 61
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-41 Score=319.42 Aligned_cols=291 Identities=23% Similarity=0.322 Sum_probs=209.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.++|++.+.||+|+||.||+|.+..++..+|+|++.... .....+.+|+.+++.+ .|+|+++++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 69 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC--------------NSPYIVGFY 69 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC--------------CCCCCCeEE
Confidence 478999999999999999999999999999999887532 2345688999999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .++..++||||+ +++|.+++.... .+++..+..++.|++.||+|||+..+++||||||+||+++.++
T Consensus 70 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~-- 141 (331)
T cd06649 70 GAFY----SDGEISICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG-- 141 (331)
T ss_pred EEEE----ECCEEEEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC--
Confidence 9887 566799999999 678888876643 4889999999999999999999864699999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...... .....+|..|+|||++.+..++
T Consensus 142 -----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~ 180 (331)
T cd06649 142 -----------------------------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 180 (331)
T ss_pred -----------------------------------------cEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCC
Confidence 4999999998755332 3345689999999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc-ccccccCCCCC--eeeccCCCcc
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK-KTLRYFTPQGN--FRRIDNLKPW 339 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~ 339 (393)
.++|||||||++|+|++|+.||...... . +....+........... .......+... ........+.
T Consensus 181 ~~~DiwslG~il~el~tg~~p~~~~~~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (331)
T cd06649 181 VQSDIWSMGLSLVELAIGRYPIPPPDAK-------E---LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPA 250 (331)
T ss_pred chHhHHHHHHHHHHHHhCCCCCCCCCHH-------H---HHHHhcccccccccCCccccCcccccccccccccccccccc
Confidence 9999999999999999999999654311 1 11122211000000000 00000000000 0000000000
Q ss_pred -hhHHHHh----hh-ccC-ChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 -GLYQVLT----EK-YHW-SKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 -~~~~~~~----~~-~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....... +. ... ....+..+.+||.+||..||++|||++|+++||||+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 251 MAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred hhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0011111 00 011 123567899999999999999999999999999998653
No 62
>KOG0666|consensus
Probab=100.00 E-value=1.7e-43 Score=307.56 Aligned_cols=300 Identities=30% Similarity=0.437 Sum_probs=230.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..|+++.+||+|+||.||+|....++. .+|||.++.+ +......-+|+.+++.+ .|+|+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl--------------~h~nv 89 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL--------------KHPNV 89 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh--------------cCCcc
Confidence 479999999999999999997666533 6899988754 34567778999999999 89999
Q ss_pred eeccccceeecCCCeEEEEEEeeccccHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARS---DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~---~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
+.+..+|.. .+..++++++|...+|+..+... ....++...++.|+.||+.|+.|||++ -|+||||||.|||+
T Consensus 90 i~Lv~Vfl~---~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N-WvlHRDLKPaNIlv 165 (438)
T KOG0666|consen 90 ISLVKVFLS---HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN-WVLHRDLKPANILV 165 (438)
T ss_pred hhHHHHHhc---cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh-heeeccCCcceEEE
Confidence 999998873 26789999999999999988532 123478889999999999999999998 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCC------CCCCCCCc
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFAD------EIQTRQYR 251 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~------~~~t~~y~ 251 (393)
..|+. .++++|++|+|+++.+..+..+ .+-|.+|+
T Consensus 166 mgdgp---------------------------------------erG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYR 206 (438)
T KOG0666|consen 166 MGDGP---------------------------------------ERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYR 206 (438)
T ss_pred eccCC---------------------------------------ccCeeEeecccHHHHhhccccccccCCceEEEEEec
Confidence 88863 1457999999999987655333 24588999
Q ss_pred hhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCC---CCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 252 SVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEY---SRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 252 aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
|||++.++. ||.+.|+|+.|||+.||++-++.|.+...+.. .-..+++.+|+.++|......|...++.-.+.+.-
T Consensus 207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~l 286 (438)
T KOG0666|consen 207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLL 286 (438)
T ss_pred ChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHH
Confidence 999999986 79999999999999999999999976543221 22578999999999998776666554433221111
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..++... ..+ ..+...+......++..++|+.+||+.||-+|+|++|+++|+||...
T Consensus 287 s~f~~~~-~~n----~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d 343 (438)
T KOG0666|consen 287 SDFRRHY-YDN----VSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED 343 (438)
T ss_pred HHhHHhh-cCc----chHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence 1110000 000 00111122222334558899999999999999999999999999875
No 63
>KOG0580|consensus
Probab=100.00 E-value=4.1e-43 Score=295.14 Aligned_cols=257 Identities=25% Similarity=0.394 Sum_probs=220.3
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
++--++|++.+.||+|.||.||+|+...++..||+|++.++. .....+++|+++...+ .|||
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L--------------~hpn 83 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL--------------RHPN 83 (281)
T ss_pred ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc--------------CCcc
Confidence 344578999999999999999999999999999999987643 2235566777776666 8999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
|+++++.|. +...+|+++||. +|.++..+..+....+++.....++.|++.|+.|+|.. +++||||||+|+|++
T Consensus 84 ilrlY~~fh----d~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k-~VIhRdiKpenlLlg 158 (281)
T KOG0580|consen 84 ILRLYGYFH----DSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK-RVIHRDIKPENLLLG 158 (281)
T ss_pred HHhhhhhee----ccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC-CcccCCCCHHHhccC
Confidence 999999998 777899999999 89999999977777799999999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-CCCCCCCCCCCCchhHHHh
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-DHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~t~~y~aPE~~~ 257 (393)
.++. +|++|||.+.... ......+||..|.+||...
T Consensus 159 ~~~~-------------------------------------------lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~ 195 (281)
T KOG0580|consen 159 SAGE-------------------------------------------LKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVE 195 (281)
T ss_pred CCCC-------------------------------------------eeccCCCceeecCCCCceeeecccccCCHhhcC
Confidence 7773 9999999887543 3345678999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++..+|+|++|++-||++.|.+||.+.+ ..+..++|.++.-
T Consensus 196 ~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~------~~etYkrI~k~~~------------------------------ 239 (281)
T KOG0580|consen 196 GRGHDKFVDLWSLGVLCYEFLVGLPPFESQS------HSETYKRIRKVDL------------------------------ 239 (281)
T ss_pred CCCccchhhHHHHHHHHHHHHhcCCchhhhh------hHHHHHHHHHccc------------------------------
Confidence 9999999999999999999999999998766 4444555544333
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.++...+..+.|+|.+||..+|.+|.+..|+++|||+...+
T Consensus 240 ------------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~~ 280 (281)
T KOG0580|consen 240 ------------KFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVANG 280 (281)
T ss_pred ------------cCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhcC
Confidence 34456677889999999999999999999999999998654
No 64
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.6e-42 Score=329.28 Aligned_cols=253 Identities=19% Similarity=0.354 Sum_probs=202.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|++..+++.||||++.... .....+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~h~~iv~~ 66 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA--------------DNPWVVKL 66 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCCCcce
Confidence 47999999999999999999999999999999987532 2234567899999998 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.++++||||+ +++|.+.+... ..+++..++.++.|++.||+|||++ |++||||||+|||++.++
T Consensus 67 ~~~~~----~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~- 138 (364)
T cd05599 67 YYSFQ----DENYLYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKL-GYIHRDIKPDNLLLDAKG- 138 (364)
T ss_pred EEEEE----cCCeEEEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCC-
Confidence 98887 677899999999 77888887664 3489999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------------- 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------------- 240 (393)
.++|+|||++......
T Consensus 139 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (364)
T cd05599 139 ------------------------------------------HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFIS 176 (364)
T ss_pred ------------------------------------------CEEEeecccceecccccccccccccccccccccccccc
Confidence 4999999987643211
Q ss_pred -------------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHH
Q psy12288 241 -------------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAH 301 (393)
Q Consensus 241 -------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 301 (393)
....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+. ......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~------~~~~~~ 250 (364)
T cd05599 177 KPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNP------QETYRK 250 (364)
T ss_pred ccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCH------HHHHHH
Confidence 0123589999999999998899999999999999999999999975541 112111
Q ss_pred HHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC---HH
Q psy12288 302 IVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS---AA 378 (393)
Q Consensus 302 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~ 378 (393)
+....... . .+-....+..+.++|++||. +|.+|++ ++
T Consensus 251 i~~~~~~~------------~--------------------------~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~ 291 (364)
T cd05599 251 IINWKETL------------Q--------------------------FPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVN 291 (364)
T ss_pred HHcCCCcc------------C--------------------------CCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence 11100000 0 00001235678899999997 9999998 99
Q ss_pred HHhcCCCCCCC
Q psy12288 379 DCLRHPWLNPR 389 (393)
Q Consensus 379 ell~hp~~~~~ 389 (393)
|+++||||++.
T Consensus 292 ~ll~h~~~~~~ 302 (364)
T cd05599 292 EIKSHPFFKGV 302 (364)
T ss_pred HHhcCCCcCCC
Confidence 99999999875
No 65
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.8e-42 Score=326.30 Aligned_cols=253 Identities=25% Similarity=0.420 Sum_probs=205.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||||++.... .....+..|+.+++.+ .|++++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~ 66 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA--------------DSPWIVKL 66 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc--------------CCCCccch
Confidence 47999999999999999999999999999999987532 2335567888999988 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.+.++||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-giiH~Dlkp~NIll~~~~- 138 (350)
T cd05573 67 YYSFQ----DEEHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL-GFIHRDIKPDNILIDADG- 138 (350)
T ss_pred hhhee----cCCeEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCC-
Confidence 98887 677899999999 78888888765 4589999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--------------------- 241 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--------------------- 241 (393)
.++|+|||++.......
T Consensus 139 ------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (350)
T cd05573 139 ------------------------------------------HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVR 176 (350)
T ss_pred ------------------------------------------CEEeecCCCCccCcccCccccccccccccccccccccc
Confidence 49999999987653322
Q ss_pred -----------CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCC
Q psy12288 242 -----------ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP 310 (393)
Q Consensus 242 -----------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p 310 (393)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+ .......+.......
T Consensus 177 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~- 249 (350)
T cd05573 177 RRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT------LQETYNKIINWKESL- 249 (350)
T ss_pred ccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC------HHHHHHHHhccCCcc-
Confidence 23468999999999999999999999999999999999999997544 111222221100000
Q ss_pred hHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-HHHHhcCCCCCCC
Q psy12288 311 KEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-AADCLRHPWLNPR 389 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~ell~hp~~~~~ 389 (393)
..+.....+..+.+||.+||. ||.+||+ ++++++||||+++
T Consensus 250 -------------------------------------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 250 -------------------------------------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred -------------------------------------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 000011246788899999998 9999999 9999999999875
No 66
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5.7e-41 Score=313.92 Aligned_cols=293 Identities=25% Similarity=0.363 Sum_probs=209.1
Q ss_pred EEEecccCceEEEEEEeCC--CCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
..+||+|+||.||+|.+.. +++.||+|.+.... ......+|+.+++.+ .|+|++++.+.+...
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l--------------~h~niv~~~~~~~~~ 70 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLREL--------------KHPNVISLQKVFLSH 70 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhc--------------CCCCCcceeeeEecC
Confidence 4689999999999998664 57889999887543 345578899999999 899999998887532
Q ss_pred cCCCeEEEEEEeeccccHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 111 SRNGTHICMVFEVMGYNLLRLIARSD-------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 111 ~~~~~~~~iv~e~~~~~l~~~~~~~~-------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+..++++||++++++...+.... ...++...++.++.|++.||.|||++ |++||||||+|||++.+..
T Consensus 71 --~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivHrDlkp~Nil~~~~~~- 146 (317)
T cd07868 71 --ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGP- 146 (317)
T ss_pred --CCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEecCCC-
Confidence 456789999999989888775321 22478899999999999999999998 9999999999999954321
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHh
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~ 257 (393)
....+||+|||+++..... .....+|+.|+|||++.
T Consensus 147 --------------------------------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 188 (317)
T cd07868 147 --------------------------------------ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 188 (317)
T ss_pred --------------------------------------CcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHc
Confidence 0125999999998765432 22456799999999998
Q ss_pred cC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC---CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 258 GA-GYGPAADIWSTACMAFELATGDYLFDPKAGKE---YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 258 ~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+. .++.++||||+||++|+|++|++||....... ......++..+....|..+...+....+..............
T Consensus 189 ~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (317)
T cd07868 189 GARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN 268 (317)
T ss_pred CCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhcc
Confidence 75 47999999999999999999999997554321 122346677788888876665554432211000000000000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
... .......+... ....+..+.+||++||+.||.+|||++|+++||||
T Consensus 269 ~~~-~~~~~~~~~~~---~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 269 TYT-NCSLIKYMEKH---KVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred ccC-cccccchHHhc---CCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 000 00000000000 01224567899999999999999999999999998
No 67
>KOG0192|consensus
Probab=100.00 E-value=1.5e-41 Score=317.01 Aligned_cols=246 Identities=25% Similarity=0.332 Sum_probs=200.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCce-EEEEEEeccccc---chhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTF-VALKIVKSDQVY---ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~-vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
....+.+.||+|+||.||+|.+. |+. ||||++...... ...+.+|+.+|.++ .||||+++
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l--------------~HpNIV~f 104 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRL--------------RHPNIVQF 104 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhC--------------CCCCeeeE
Confidence 34566677999999999999776 444 999998754322 45899999999999 89999999
Q ss_pred cccceeecCCCe-EEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC-eeeccCCCCceEEeec
Q psy12288 104 LNDFKIYSRNGT-HICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR-IIHTDIKPENILMCVD 180 (393)
Q Consensus 104 ~~~~~~~~~~~~-~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~-i~H~dlkp~NIl~~~~ 180 (393)
++.+. ... ..++||||+ +|+|.+++.......++...+..++.||+.|+.|||++ + |+|||||++|||++.+
T Consensus 105 ~G~~~----~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~iIHrDLK~~NiLv~~~ 179 (362)
T KOG0192|consen 105 YGACT----SPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-GPIIHRDLKSDNILVDLK 179 (362)
T ss_pred EEEEc----CCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCeeecccChhhEEEcCC
Confidence 99887 333 689999999 88888888764345699999999999999999999998 9 9999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~ 257 (393)
+. ++||+|||+++... .......||+.|||||++.
T Consensus 180 ~~------------------------------------------~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~ 217 (362)
T KOG0192|consen 180 GK------------------------------------------TLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLR 217 (362)
T ss_pred CC------------------------------------------EEEECCCccceeeccccccccCCCCCccccChhhhc
Confidence 51 59999999998665 3344568999999999999
Q ss_pred --cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 258 --GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 258 --~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
...++.++||||||+++|||++|+.||.... . .++...+...+..|.
T Consensus 218 ~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~------~-~~~~~~v~~~~~Rp~------------------------ 266 (362)
T KOG0192|consen 218 GEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA------P-VQVASAVVVGGLRPP------------------------ 266 (362)
T ss_pred CCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC------H-HHHHHHHHhcCCCCC------------------------
Confidence 5689999999999999999999999998666 2 222323222222222
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
++..++..+..+|.+||..||.+||++.+++.
T Consensus 267 ---------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 267 ---------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred ---------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 33456788899999999999999999998764
No 68
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.1e-42 Score=327.29 Aligned_cols=251 Identities=20% Similarity=0.348 Sum_probs=200.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~hp~iv~~ 66 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES--------------DSPWVVSL 66 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC--------------CCCCcceE
Confidence 37999999999999999999999999999999886432 2234567788888887 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. ++.++++||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. |++||||||+|||++.++
T Consensus 67 ~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NIll~~~~- 138 (377)
T cd05629 67 YYSFQ----DAQYLYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKL-GFIHRDIKPDNILIDRGG- 138 (377)
T ss_pred EEEEE----cCCeeEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCC-
Confidence 99887 677899999999 78888888654 4588999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------------- 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------------- 240 (393)
.++|+|||++......
T Consensus 139 ------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (377)
T cd05629 139 ------------------------------------------HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNR 176 (377)
T ss_pred ------------------------------------------CEEEeecccccccccccccccccccccccccccccccc
Confidence 4899999987532100
Q ss_pred ----------------------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCC
Q psy12288 241 ----------------------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292 (393)
Q Consensus 241 ----------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~ 292 (393)
....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~---- 252 (377)
T cd05629 177 NSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSEN---- 252 (377)
T ss_pred cccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCC----
Confidence 002368999999999998889999999999999999999999997544
Q ss_pred CCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccC
Q psy12288 293 SRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVN 370 (393)
Q Consensus 293 ~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~d 370 (393)
.......+...... ..++ ...+..+.+||.+||. +
T Consensus 253 --~~~~~~~i~~~~~~----------------------------------------~~~p~~~~~s~~~~dli~~lL~-~ 289 (377)
T cd05629 253 --SHETYRKIINWRET----------------------------------------LYFPDDIHLSVEAEDLIRRLIT-N 289 (377)
T ss_pred --HHHHHHHHHccCCc----------------------------------------cCCCCCCCCCHHHHHHHHHHhc-C
Confidence 12222222111000 0011 1245678899999998 7
Q ss_pred CCCC---cCHHHHhcCCCCCCC
Q psy12288 371 QKLR---ASAADCLRHPWLNPR 389 (393)
Q Consensus 371 P~~R---pt~~ell~hp~~~~~ 389 (393)
|.+| +++.|+++||||+++
T Consensus 290 ~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 290 AENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred HhhcCCCCCHHHHhcCCCcCCC
Confidence 7776 599999999999875
No 69
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8e-42 Score=318.99 Aligned_cols=242 Identities=23% Similarity=0.357 Sum_probs=197.5
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||+|++..+++.||+|++... ......+.+|+.+++.+ .|+|++++.+.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~~~~--- 63 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV--------------NCPFIVPLKFSFQ--- 63 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCcEeceeeEEe---
Confidence 69999999999999999999999998743 22234567788899888 8999999988886
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.....++||||+ +++|.+.+... ..+++..+..++.|++.||.|||++ |++||||||+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~HrDlkp~Nili~~~~--------- 130 (312)
T cd05585 64 -SPEKLYLVLAFINGGELFHHLQRE--GRFDLSRARFYTAELLCALENLHKF-NVIYRDLKPENILLDYQG--------- 130 (312)
T ss_pred -cCCeEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHeEECCCC---------
Confidence 567899999999 78888888654 3488999999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCCCchhhH
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGYGPAADI 267 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di 267 (393)
.++|+|||++..... ......||+.|+|||++.+..++.++||
T Consensus 131 ----------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv 176 (312)
T cd05585 131 ----------------------------------HIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDW 176 (312)
T ss_pred ----------------------------------cEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccce
Confidence 499999999875321 1233468999999999999889999999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
|||||++|+|++|..||.+.+. ...... +...
T Consensus 177 wslGvil~el~tg~~pf~~~~~------~~~~~~------------------------------------------~~~~ 208 (312)
T cd05585 177 WTLGVLLYEMLTGLPPFYDENV------NEMYRK------------------------------------------ILQE 208 (312)
T ss_pred echhHHHHHHHhCCCCcCCCCH------HHHHHH------------------------------------------HHcC
Confidence 9999999999999999975431 111111 1111
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCc---CHHHHhcCCCCCCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRA---SAADCLRHPWLNPR 389 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~ell~hp~~~~~ 389 (393)
...++...+..+.++|.+||..||.+|| ++.|++.||||++.
T Consensus 209 ~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 209 PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 2223445667889999999999999997 58999999999975
No 70
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.1e-41 Score=316.74 Aligned_cols=250 Identities=23% Similarity=0.361 Sum_probs=199.7
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
|++.+.||+|+||.||+|.+..+++.||||+++... ...+.+.+|..++..+.. ..|+|++++++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~-----------l~hp~i~~~~~ 69 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS-----------ERHPFLVNLFA 69 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc-----------cCCCChhceee
Confidence 788999999999999999999999999999987532 223445666666655421 27999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+.+.++||||+ +++|...+.. ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 70 ~~~----~~~~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrdlkp~Nill~~~~--- 138 (324)
T cd05589 70 CFQ----TEDHVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN-KIVYRDLKLDNLLLDTEG--- 138 (324)
T ss_pred EEE----cCCEEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCC---
Confidence 887 667899999999 6777766643 3489999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||++.... .......|++.|+|||.+.+..+
T Consensus 139 ----------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 178 (324)
T cd05589 139 ----------------------------------------FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSY 178 (324)
T ss_pred ----------------------------------------cEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCC
Confidence 49999999876432 22334568999999999999889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+|||||++|+|++|+.||.+.+ .......+..
T Consensus 179 ~~~~DiwslG~il~el~~G~~pf~~~~------~~~~~~~i~~------------------------------------- 215 (324)
T cd05589 179 TRAVDWWGLGVLIYEMLVGESPFPGDD------EEEVFDSIVN------------------------------------- 215 (324)
T ss_pred CcccchhhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh-------------------------------------
Confidence 999999999999999999999997544 1222221111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
....++...+..+.++|.+||..||.+|| ++.++++||||++.
T Consensus 216 -----~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 216 -----DEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 11112234566788999999999999999 79999999999875
No 71
>KOG0201|consensus
Probab=100.00 E-value=2.6e-43 Score=319.71 Aligned_cols=252 Identities=28% Similarity=0.451 Sum_probs=211.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..|+..+.||+|+||.||+|.+..+++.||||++.... ...+.+++|+.+|..+ .+++|.+.++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~--------------~~~~it~yyg 78 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC--------------DSPNITEYYG 78 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhc--------------CcchHHhhhh
Confidence 46888899999999999999999999999999987543 3346788999999999 7899999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+..+|++|||| +|++.+++..+. .+.+.++.-++++++.|+.|||.+ +.+|||||+.||++..++
T Consensus 79 syl----~g~~LwiiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~-~kiHrDIKaanil~s~~g--- 148 (467)
T KOG0201|consen 79 SYL----KGTKLWIIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSE-KKIHRDIKAANILLSESG--- 148 (467)
T ss_pred hee----ecccHHHHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhc-ceecccccccceeEeccC---
Confidence 998 778899999999 888888887654 247888888999999999999999 999999999999998886
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||.+..+... ....+||+.|||||++....|
T Consensus 149 ----------------------------------------~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y 188 (467)
T KOG0201|consen 149 ----------------------------------------DVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGY 188 (467)
T ss_pred ----------------------------------------cEEEEecceeeeeechhhccccccccccccchhhhccccc
Confidence 3999999998765432 356789999999999998899
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++||||||++.+||++|.+|+....++. ++-.+|...
T Consensus 189 ~~KADIWSLGITaiEla~GePP~s~~hPmr-------------vlflIpk~~---------------------------- 227 (467)
T KOG0201|consen 189 DTKADIWSLGITAIELAKGEPPHSKLHPMR-------------VLFLIPKSA---------------------------- 227 (467)
T ss_pred cchhhhhhhhHHHHHHhcCCCCCcccCcce-------------EEEeccCCC----------------------------
Confidence 999999999999999999999997666422 111111100
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+....+..|.+|+..||+.||+.||+|.+||+|+|++.-+
T Consensus 228 ------PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 228 ------PPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred ------CCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 0012346678899999999999999999999999999998744
No 72
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.5e-41 Score=324.16 Aligned_cols=253 Identities=22% Similarity=0.351 Sum_probs=198.6
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|+++++||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+++++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l--------------~h~~iv~l~ 67 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA--------------DNEWVVKLY 67 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc--------------CCCCeeeeE
Confidence 5899999999999999999999999999999987532 2234577899999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. ...++++||||+ +++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+|||++.++
T Consensus 68 ~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDlKp~Nili~~~~-- 138 (381)
T cd05626 68 YSFQ----DKDNLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKM-GFIHRDIKPDNILIDLDG-- 138 (381)
T ss_pred EEEe----cCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCcHHHEEECCCC--
Confidence 9887 667899999999 77888887664 3488999999999999999999998 999999999999997665
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------------------------
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------------------------ 239 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------------------------ 239 (393)
+++|+|||++.....
T Consensus 139 -----------------------------------------~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (381)
T cd05626 139 -----------------------------------------HIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLW 177 (381)
T ss_pred -----------------------------------------CEEEeeCcCCcccccccccccccccccccccccCccccc
Confidence 489999998643210
Q ss_pred --------------------------CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCC
Q psy12288 240 --------------------------HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYS 293 (393)
Q Consensus 240 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~ 293 (393)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~---- 253 (381)
T cd05626 178 DDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTP---- 253 (381)
T ss_pred ccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCH----
Confidence 00124689999999999988899999999999999999999999975441
Q ss_pred CcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhcccc--CC
Q psy12288 294 RDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHV--NQ 371 (393)
Q Consensus 294 ~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~--dP 371 (393)
......+....... ..+.....+.++.+||.+|++. +|
T Consensus 254 --~~~~~~i~~~~~~~--------------------------------------~~~~~~~~s~~~~dli~~ll~~~~~~ 293 (381)
T cd05626 254 --TETQLKVINWENTL--------------------------------------HIPPQVKLSPEAVDLITKLCCSAEER 293 (381)
T ss_pred --HHHHHHHHcccccc--------------------------------------CCCCCCCCCHHHHHHHHHHccCcccc
Confidence 11111111100000 0000123456788999986654 45
Q ss_pred CCCcCHHHHhcCCCCCCC
Q psy12288 372 KLRASAADCLRHPWLNPR 389 (393)
Q Consensus 372 ~~Rpt~~ell~hp~~~~~ 389 (393)
..|++++++++||||.++
T Consensus 294 ~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 294 LGRNGADDIKAHPFFSEV 311 (381)
T ss_pred cCCCCHHHHhcCcccCCC
Confidence 559999999999999874
No 73
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=8.7e-42 Score=327.00 Aligned_cols=252 Identities=21% Similarity=0.352 Sum_probs=200.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++++.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ .|+++++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~h~~iv~~~ 67 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA--------------DNEWVVKLY 67 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC--------------CCCCcceEE
Confidence 6999999999999999999999999999999986432 2235577899999998 889999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .++.+++||||+ +++|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 68 ~~~~----~~~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~-- 138 (376)
T cd05598 68 YSFQ----DKDNLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDG-- 138 (376)
T ss_pred EEEE----cCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHEEECCCC--
Confidence 8887 677899999999 78888888664 3488999999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------------------------
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------------------------ 239 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------------------------ 239 (393)
.++|+|||++..+..
T Consensus 139 -----------------------------------------~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (376)
T cd05598 139 -----------------------------------------HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEW 177 (376)
T ss_pred -----------------------------------------CEEEEeCCCCccccccccccccccccccccccccccccc
Confidence 499999998642210
Q ss_pred ----------------------CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHH
Q psy12288 240 ----------------------HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDD 297 (393)
Q Consensus 240 ----------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~ 297 (393)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+. ..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~ 251 (376)
T cd05598 178 SEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTP------AE 251 (376)
T ss_pred cccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCH------HH
Confidence 00123689999999999998899999999999999999999999976542 11
Q ss_pred HHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc--
Q psy12288 298 HLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-- 375 (393)
Q Consensus 298 ~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-- 375 (393)
....+....... ..+.....+..+.++|.+|+ .+|.+|+
T Consensus 252 ~~~~i~~~~~~~--------------------------------------~~~~~~~~s~~~~~li~~l~-~~p~~R~~~ 292 (376)
T cd05598 252 TQLKVINWETTL--------------------------------------HIPSQAKLSREASDLILRLC-CGAEDRLGK 292 (376)
T ss_pred HHHHHhccCccc--------------------------------------cCCCCCCCCHHHHHHHHHHh-cCHhhcCCC
Confidence 111111000000 00011234567788999976 5999999
Q ss_pred -CHHHHhcCCCCCCC
Q psy12288 376 -SAADCLRHPWLNPR 389 (393)
Q Consensus 376 -t~~ell~hp~~~~~ 389 (393)
++.|+++||||+++
T Consensus 293 ~t~~ell~h~~~~~~ 307 (376)
T cd05598 293 NGADEIKAHPFFKGI 307 (376)
T ss_pred CCHHHHhCCCCcCCC
Confidence 99999999999875
No 74
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.8e-41 Score=325.47 Aligned_cols=252 Identities=22% Similarity=0.353 Sum_probs=199.9
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|+++++||+|+||.||+|++..+++.||+|.+.... .....+.+|+.+++.+ .|+++++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~--------------~h~~iv~~~ 67 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA--------------DNEWVVRLY 67 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC--------------CCCcCCeEE
Confidence 6999999999999999999999999999999987532 2235677899999998 889999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .+..+++||||+ +++|.+.+.+. ..+++..++.++.||+.||+|||+. ||+||||||+|||++.++
T Consensus 68 ~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~-~ivHrDlKp~NILl~~~g-- 138 (382)
T cd05625 68 YSFQ----DKDNLYFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKM-GFIHRDIKPDNILIDRDG-- 138 (382)
T ss_pred EEEE----eCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCC--
Confidence 9887 667899999999 77888887664 3488999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------------------------
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------------------------ 239 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------------------------ 239 (393)
.++|+|||++.....
T Consensus 139 -----------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (382)
T cd05625 139 -----------------------------------------HIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEW 177 (382)
T ss_pred -----------------------------------------CEEEeECCCCccccccccccccccccccccccccccccc
Confidence 499999998642210
Q ss_pred --------------------------CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCC
Q psy12288 240 --------------------------HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYS 293 (393)
Q Consensus 240 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~ 293 (393)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---- 253 (382)
T cd05625 178 GDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTP---- 253 (382)
T ss_pred cccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCH----
Confidence 00123689999999999998999999999999999999999999975441
Q ss_pred CcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC
Q psy12288 294 RDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373 (393)
Q Consensus 294 ~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 373 (393)
......+....... ..+.....++.+.++|.+|+ .+|.+
T Consensus 254 --~~~~~~i~~~~~~~--------------------------------------~~p~~~~~s~~~~~li~~l~-~~p~~ 292 (382)
T cd05625 254 --LETQMKVINWQTSL--------------------------------------HIPPQAKLSPEASDLIIKLC-RGPED 292 (382)
T ss_pred --HHHHHHHHccCCCc--------------------------------------CCCCcccCCHHHHHHHHHHc-cCHhH
Confidence 11111111100000 00001234567889999876 59999
Q ss_pred CcC---HHHHhcCCCCCCC
Q psy12288 374 RAS---AADCLRHPWLNPR 389 (393)
Q Consensus 374 Rpt---~~ell~hp~~~~~ 389 (393)
|++ ++++++||||+.+
T Consensus 293 R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 293 RLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred cCCCCCHHHHhcCCCcCCc
Confidence 997 9999999999875
No 75
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.9e-41 Score=315.35 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=198.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+..|..+++.+. .+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-------------~~~~i~~~~ 67 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG-------------KPPFLTQLH 67 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcC-------------CCCceeeeE
Confidence 4899999999999999999999999999999987532 22344567777777762 234567777
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. ....+++||||+ +++|...+... ..+++..+..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 68 ~~~~----~~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~-- 138 (324)
T cd05587 68 SCFQ----TMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDAEG-- 138 (324)
T ss_pred EEEE----cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEEcCCC--
Confidence 7776 566799999999 78888877654 3488999999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++.... .......||+.|+|||++.+..
T Consensus 139 -----------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 177 (324)
T cd05587 139 -----------------------------------------HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQP 177 (324)
T ss_pred -----------------------------------------CEEEeecCcceecCCCCCceeeecCCccccChhhhcCCC
Confidence 49999999876432 1223346899999999999988
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+|||||++|+|++|+.||.+.+ .......+..
T Consensus 178 ~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~~------------------------------------ 215 (324)
T cd05587 178 YGKSVDWWAFGVLLYEMLAGQPPFDGED------EDELFQSIME------------------------------------ 215 (324)
T ss_pred CCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHc------------------------------------
Confidence 9999999999999999999999996543 2222222211
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH-----HHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA-----ADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~ 389 (393)
....++...+..+.+++++||..||.+|+++ +++++||||+..
T Consensus 216 ------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 216 ------HNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred ------CCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 1111233456678899999999999999986 899999999875
No 76
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.4e-41 Score=321.28 Aligned_cols=289 Identities=26% Similarity=0.401 Sum_probs=217.8
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCC--CCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
..+..+..+|++++.||+|+||.||+|.... ++..|++|.+... ....+|+.+++.+ .|+
T Consensus 85 ~~~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l--------------~h~ 146 (392)
T PHA03207 85 DPASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTI--------------SHR 146 (392)
T ss_pred CcchhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhc--------------CCC
Confidence 3445566789999999999999999997643 4678999987643 3456899999999 899
Q ss_pred cceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
|++++++.+. .....+++||++++++..++... ..+++.++..++.||+.||+|||++ ||+||||||+|||++
T Consensus 147 ~iv~~~~~~~----~~~~~~lv~e~~~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~-givHrDlkp~Nill~ 219 (392)
T PHA03207 147 AIINLIHAYR----WKSTVCMVMPKYKCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGR-GIIHRDVKTENIFLD 219 (392)
T ss_pred CccceeeeEe----eCCEEEEEehhcCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEc
Confidence 9999998886 56679999999999999988443 4589999999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchh
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSV 253 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aP 253 (393)
.++ .++|+|||++...... .....||+.|+||
T Consensus 220 ~~~-------------------------------------------~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aP 256 (392)
T PHA03207 220 EPE-------------------------------------------NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSP 256 (392)
T ss_pred CCC-------------------------------------------CEEEccCccccccCcccccccccccccccCccCH
Confidence 766 4999999998765432 1234689999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc-cccCCCCCeee
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL-RYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~ 332 (393)
|++.+..++.++|||||||++|+|++|+.||.+..... ...++..+.+..+..|.+......... ..+.. ...
T Consensus 257 E~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 330 (392)
T PHA03207 257 ELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS---SSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQ---YAI 330 (392)
T ss_pred hHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC---cHHHHHHHHHHhccCccccCCccchhHHHHHHh---hcc
Confidence 99999889999999999999999999999997765543 566777777777765543321110000 00000 000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....+......+. ....+..+.++|++||..||.+|||+.|+|.||||+..
T Consensus 331 -~~~~~~~~~~~~~-----~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 331 -VLRPPYTIPPVIR-----KYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred -cccCCccccchhh-----ccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 0000000000000 01234577899999999999999999999999999864
No 77
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.7e-41 Score=318.80 Aligned_cols=244 Identities=24% Similarity=0.366 Sum_probs=197.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ .|++++++.+.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~~~~~~~- 65 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT--------------RHPFLTSLKYSFQ- 65 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCCCcceEEEEE-
Confidence 36899999999999999999999999987532 2234566788888888 8899999988877
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+...++||||+ +++|...+... ..+++.+++.++.||+.||+|||++ |++||||||+|||++.++
T Consensus 66 ---~~~~~~lv~Ey~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~NIll~~~~------- 132 (328)
T cd05593 66 ---TKDRLCFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSG-KIVYRDLKLENLMLDKDG------- 132 (328)
T ss_pred ---cCCEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeEECCCC-------
Confidence 677899999999 77887777554 3488999999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.+||+|||++..... ......||+.|+|||++.+..++.++
T Consensus 133 ------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 176 (328)
T cd05593 133 ------------------------------------HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAV 176 (328)
T ss_pred ------------------------------------cEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccC
Confidence 499999999875322 22345689999999999988899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|+.||...+. ......+ .
T Consensus 177 DiwslGvil~elltG~~Pf~~~~~------~~~~~~~------------------------------------------~ 208 (328)
T cd05593 177 DWWGLGVVMYEMMCGRLPFYNQDH------EKLFELI------------------------------------------L 208 (328)
T ss_pred CccccchHHHHHhhCCCCCCCCCH------HHHHHHh------------------------------------------c
Confidence 999999999999999999965431 1111111 0
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||++||..||.+|+ ++.|+++||||.+.
T Consensus 209 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 209 MEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred cCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 011123345567888999999999999997 89999999999874
No 78
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.4e-41 Score=317.49 Aligned_cols=254 Identities=22% Similarity=0.353 Sum_probs=199.4
Q ss_pred eEEEEEEecccCceEEEEEEeC---CCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+|++.++||+|+||.||+|++. .+++.||+|++.... ...+.+..|+.+++.+. .|+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-------------~~~~i 67 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR-------------QSPFL 67 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc-------------CCCCc
Confidence 4899999999999999999874 468899999987432 22345677888888873 57888
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+.+. .....++||||+ +++|.+.+... ..++++++..++.||+.||+|||++ |++||||||+|||++.
T Consensus 68 ~~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nili~~ 140 (332)
T cd05614 68 VTLHYAFQ----TEAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKL-GIVYRDIKLENILLDS 140 (332)
T ss_pred ccEEEEEe----cCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHeEECC
Confidence 88887776 667799999999 78888888664 3488999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEV 255 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~ 255 (393)
++ .++|+|||++...... .....||+.|+|||+
T Consensus 141 ~~-------------------------------------------~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~ 177 (332)
T cd05614 141 EG-------------------------------------------HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEI 177 (332)
T ss_pred CC-------------------------------------------CEEEeeCcCCccccccCCCccccccCCccccCHHH
Confidence 76 4999999998754221 223468999999999
Q ss_pred HhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+. .++.++|||||||++|+|++|+.||....... ....+...
T Consensus 178 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~~~~~~~-------------------------------- 222 (332)
T cd05614 178 IRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN---TQSEVSRR-------------------------------- 222 (332)
T ss_pred hcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC---CHHHHHHH--------------------------------
Confidence 9875 47889999999999999999999996543221 11111110
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
+......++...+..+.+++.+||..||.+|| +++++++||||++.
T Consensus 223 ---------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 223 ---------ILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred ---------HhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 00111122344567788999999999999999 88999999999875
No 79
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.4e-41 Score=321.52 Aligned_cols=257 Identities=23% Similarity=0.373 Sum_probs=202.8
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
....++|++.++||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+ .|++
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~--------------~hp~ 104 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--------------NSPW 104 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC--------------CCCC
Confidence 334578999999999999999999999999999999986422 1234467888888888 8999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
++++++.+. .+.++++||||+ +++|.+++... .+++..+..++.||+.||+|||++ ||+||||||+|||++
T Consensus 105 iv~~~~~~~----~~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~-~IvHrDLKp~NILl~ 176 (370)
T cd05621 105 VVQLFCAFQ----DDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM-GLIHRDVKPDNMLLD 176 (370)
T ss_pred EeeEEEEEE----cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEC
Confidence 999998887 677899999999 78888887553 378899999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVE 254 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE 254 (393)
.++ .+||+|||++...... .....||+.|+|||
T Consensus 177 ~~~-------------------------------------------~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE 213 (370)
T cd05621 177 KHG-------------------------------------------HLKLADFGTCMKMDETGMVRCDTAVGTPDYISPE 213 (370)
T ss_pred CCC-------------------------------------------CEEEEecccceecccCCceecccCCCCcccCCHH
Confidence 766 4999999998765432 22456899999999
Q ss_pred HHhcCC----CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 255 VLIGAG----YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 255 ~~~~~~----~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
++.+.+ ++.++|+|||||++|+|++|+.||.+.+ .......+........
T Consensus 214 ~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~-------------------- 267 (370)
T cd05621 214 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS------LVGTYSKIMDHKNSLN-------------------- 267 (370)
T ss_pred HHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCcccC--------------------
Confidence 998653 6889999999999999999999997554 2222222222111000
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
.+-....+..+.+++.+||..++.+ |+++.|+++||||++.
T Consensus 268 ------------------~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 268 ------------------FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred ------------------CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 0001234667889999999855543 8899999999999864
No 80
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5e-41 Score=314.63 Aligned_cols=245 Identities=24% Similarity=0.364 Sum_probs=195.9
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|++.... ........|..++..+. .|++++++++.+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-------------~h~~iv~~~~~~~- 66 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-------------NHPFLTQLYCCFQ- 66 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc-------------CCCchhceeeEEE-
Confidence 36899999999999999999999999987532 22234456777766652 6899999999887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
....+++||||+ +++|...+... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~iv~Ey~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~-~ivH~dlkp~NIli~~~~------- 133 (320)
T cd05590 67 ---TPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDK-GIIYRDLKLDNVLLDHEG------- 133 (320)
T ss_pred ---cCCEEEEEEcCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCC-------
Confidence 667899999999 67888777654 3488999999999999999999998 999999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (320)
T cd05590 134 ------------------------------------HCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSV 177 (320)
T ss_pred ------------------------------------cEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCcc
Confidence 49999999876432 223345689999999999988899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|+|||||++|+|++|+.||...+ .......+..
T Consensus 178 DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~----------------------------------------- 210 (320)
T cd05590 178 DWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAILN----------------------------------------- 210 (320)
T ss_pred chhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHhc-----------------------------------------
Confidence 99999999999999999997544 1222221111
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCH------HHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASA------ADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~ell~hp~~~~~ 389 (393)
....++...+..+.++|++||+.||.+||++ +++++||||++.
T Consensus 211 -~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 211 -DEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred -CCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 1111223345678899999999999999998 999999999875
No 81
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.6e-41 Score=315.05 Aligned_cols=252 Identities=22% Similarity=0.336 Sum_probs=198.5
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
++||+|+||.||+|.+..+++.||+|+++... .....+..|..+++.+. .|++++++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~-------------~hp~Iv~~~~~~~- 66 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS-------------NHPFLVGLHSCFQ- 66 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-------------CCCCCCceEEEEE-
Confidence 36899999999999999999999999987532 22344667888887773 6899999998887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
....+++||||+ +++|...+... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~e~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nili~~~~------- 133 (329)
T cd05588 67 ---TESRLFFVIEFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHER-GIIYRDLKLDNVLLDAEG------- 133 (329)
T ss_pred ---cCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCC-------
Confidence 667899999999 77888777654 3589999999999999999999998 999999999999997766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++... ........||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (329)
T cd05588 134 ------------------------------------HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 177 (329)
T ss_pred ------------------------------------CEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCcc
Confidence 4999999988642 1223345789999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCC--cHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSR--DDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
|+|||||++|+|++|+.||.......... ....+. ..
T Consensus 178 DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~-----------------------------------------~~ 216 (329)
T cd05588 178 DWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLF-----------------------------------------QV 216 (329)
T ss_pred ceechHHHHHHHHHCCCCcccccccccccccchHHHH-----------------------------------------HH
Confidence 99999999999999999996433221100 000000 11
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcC------HHHHhcCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS------AADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~ell~hp~~~~~ 389 (393)
+......++...+..+.++|++||+.||.+||+ ++++++||||+++
T Consensus 217 ~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 217 ILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred HHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 111222234456678899999999999999997 7899999999864
No 82
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.6e-41 Score=321.60 Aligned_cols=252 Identities=24% Similarity=0.368 Sum_probs=202.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+++++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~--------------~h~~iv~ 107 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA--------------NSEWIVQ 107 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC--------------CCCCcce
Confidence 358999999999999999999999999999999986432 2234467888999888 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. .+.++++||||+ +++|.+.+... .+++..+..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 108 ~~~~~~----~~~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~ 179 (370)
T cd05596 108 LHYAFQ----DDKYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSG 179 (370)
T ss_pred EEEEEe----cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEcCCC
Confidence 998887 677899999999 78888877543 378899999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHh
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~ 257 (393)
.++|+|||++...... .....||+.|+|||++.
T Consensus 180 -------------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 216 (370)
T cd05596 180 -------------------------------------------HLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLK 216 (370)
T ss_pred -------------------------------------------CEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhc
Confidence 4999999998765322 23456899999999997
Q ss_pred cC----CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 258 GA----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 258 ~~----~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+. .++.++|+|||||++|+|++|+.||.+.+. ......+......
T Consensus 217 ~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~------------------------- 265 (370)
T cd05596 217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMDHKNS------------------------- 265 (370)
T ss_pred cCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH------HHHHHHHHcCCCc-------------------------
Confidence 64 378899999999999999999999976541 1222222110000
Q ss_pred cCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
..++ ...+..+.+||++||..+|.+ |++++|+++||||++.
T Consensus 266 ---------------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 266 ---------------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred ---------------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 0011 135678889999999999988 9999999999999874
No 83
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.4e-40 Score=306.66 Aligned_cols=255 Identities=24% Similarity=0.344 Sum_probs=203.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|++.++||+|+||.||++.+..+++.||+|.+..... ....+.+|+.+++.+ .|++++++.
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 66 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV--------------NSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc--------------CCCCEeeee
Confidence 48999999999999999999999999999998864321 123456799999998 789999998
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .+.+.++||||+ +++|...+.......+++..+..++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~-- 139 (285)
T cd05605 67 YAYE----TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDDYG-- 139 (285)
T ss_pred eeec----CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHEEECCCC--
Confidence 8876 567899999999 67887776554444589999999999999999999998 999999999999997665
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....+++.|+|||++.+..+
T Consensus 140 -----------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 178 (285)
T cd05605 140 -----------------------------------------HIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERY 178 (285)
T ss_pred -----------------------------------------CEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCC
Confidence 4999999998765322 223468899999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||+||++|+|++|+.||.+.... .....+.....
T Consensus 179 ~~~~Diws~G~~l~el~~g~~pf~~~~~~------~~~~~~~~~~~---------------------------------- 218 (285)
T cd05605 179 TFSPDWWGLGCLIYEMIEGKSPFRQRKEK------VKREEVERRVK---------------------------------- 218 (285)
T ss_pred CccccchhHHHHHHHHHHCCCCCCCCchh------hHHHHHHHHhh----------------------------------
Confidence 99999999999999999999999754321 11111111000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||.+||..||.+|| +++++++||||+..
T Consensus 219 ----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 219 ----EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred ----hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 001112234567788999999999999999 89999999999864
No 84
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.5e-41 Score=315.38 Aligned_cols=244 Identities=23% Similarity=0.350 Sum_probs=197.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..++..||+|++.... .....+.+|+.+++.+ .|+|++++.+.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~i~~~~~~~~- 65 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--------------RHPFLTALKYAFQ- 65 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC--------------CCCCCcceeeEEe-
Confidence 36899999999999999999999999987532 1234456788888888 8899999988887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+...++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+|||++.++
T Consensus 66 ---~~~~~~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~------- 132 (323)
T cd05595 66 ---THDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDG------- 132 (323)
T ss_pred ---cCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEcCCC-------
Confidence 567899999999 77887776554 3488999999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++..... ......||+.|+|||++.+..++.++
T Consensus 133 ------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 176 (323)
T cd05595 133 ------------------------------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 176 (323)
T ss_pred ------------------------------------CEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchh
Confidence 499999998765321 12335689999999999988899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|+.||...+. ......+.
T Consensus 177 DiwSlGvil~ell~g~~Pf~~~~~------~~~~~~~~------------------------------------------ 208 (323)
T cd05595 177 DWWGLGVVMYEMMCGRLPFYNQDH------ERLFELIL------------------------------------------ 208 (323)
T ss_pred chhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHh------------------------------------------
Confidence 999999999999999999965431 11111111
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.++|.+||..||.+|| ++.++++||||.+.
T Consensus 209 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 209 MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred cCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 111123345567888999999999999998 89999999999874
No 85
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.5e-40 Score=308.46 Aligned_cols=293 Identities=26% Similarity=0.372 Sum_probs=210.9
Q ss_pred EEEecccCceEEEEEEeCC--CCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
..+||+|+||.||+|.... ++..||+|.+.... ....+.+|+.+++.+ .|+|++++.+.+...
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l--------------~h~niv~~~~~~~~~ 70 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLREL--------------KHPNVIALQKVFLSH 70 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhC--------------CCCCeeeEEEEEecc
Confidence 4689999999999998664 56789999887543 335678899999999 899999998887532
Q ss_pred cCCCeEEEEEEeeccccHHHHHHhc-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 111 SRNGTHICMVFEVMGYNLLRLIARS-------DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 111 ~~~~~~~~iv~e~~~~~l~~~~~~~-------~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+...+++|||+++++.+.+... ....+++..+..++.|++.||+|||+. +++||||||+||++..+..
T Consensus 71 --~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivH~Dlkp~Nil~~~~~~- 146 (317)
T cd07867 71 --SDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGP- 146 (317)
T ss_pred --CCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEccCCC-
Confidence 45678999999998988877432 112478888999999999999999998 9999999999999954321
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHh
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~ 257 (393)
....++|+|||+++..... .....+|+.|+|||++.
T Consensus 147 --------------------------------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 188 (317)
T cd07867 147 --------------------------------------ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 188 (317)
T ss_pred --------------------------------------CCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhc
Confidence 0125999999998765432 22346789999999998
Q ss_pred cC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC---CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 258 GA-GYGPAADIWSTACMAFELATGDYLFDPKAGKE---YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 258 ~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+. .++.++|||||||++|+|++|++||....... ......++..+....|......+....+...+..........
T Consensus 189 ~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (317)
T cd07867 189 GARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRT 268 (317)
T ss_pred CCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhccc
Confidence 75 47899999999999999999999997544321 112345667777777776665555443332222221111111
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... ............+..+.+||.+||..||.+|||+.|+++||||
T Consensus 269 ~~~~~~----~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 269 TYANSS----LIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred ccCCch----hhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 100000 0001111122345678899999999999999999999999998
No 86
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.1e-40 Score=312.86 Aligned_cols=250 Identities=21% Similarity=0.310 Sum_probs=199.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++.+.||+|+||.||+|++..+++.||+|++...... ......|..++..+. .|++++++.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-------------~~~~i~~~~ 67 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG-------------KPPFLTQLH 67 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-------------CCCeEeeEE
Confidence 488999999999999999999999999999998754221 123345556665552 567888888
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+++. .....++||||+ +++|...+... ..+++.++..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 68 ~~~~----~~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~-- 138 (323)
T cd05616 68 SCFQ----TMDRLYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEG-- 138 (323)
T ss_pred EEEe----cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEecCCCHHHeEECCCC--
Confidence 8876 567899999999 78888887654 3488999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++.... .......||+.|+|||++.+..
T Consensus 139 -----------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 177 (323)
T cd05616 139 -----------------------------------------HIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQP 177 (323)
T ss_pred -----------------------------------------cEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCC
Confidence 49999999987432 1223456899999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+|||||++|+|++|+.||...+ .......+..
T Consensus 178 ~~~~~DiwSlGvil~elltg~~Pf~~~~------~~~~~~~i~~------------------------------------ 215 (323)
T cd05616 178 YGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIME------------------------------------ 215 (323)
T ss_pred CCCccchhchhHHHHHHHhCCCCCCCCC------HHHHHHHHHh------------------------------------
Confidence 9999999999999999999999997544 2222222221
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH-----HHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA-----ADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~ 389 (393)
....++...+..+.+++.+||..||.+|+++ .++++||||+..
T Consensus 216 ------~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 216 ------HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred ------CCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 1112234456778899999999999999984 899999999865
No 87
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=8.6e-41 Score=312.50 Aligned_cols=246 Identities=22% Similarity=0.317 Sum_probs=194.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
++||+|+||.||+|++..+++.||+|.++... ........|..++.... .|++++++++.+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-------------~~~~i~~~~~~~~- 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAW-------------ENPFLTHLYCTFQ- 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhcc-------------CCCCccCeeEEEE-
Confidence 46999999999999999999999999987542 12234455666665441 6889999998887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
..+++++||||+ +++|...+... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nil~~~~~------- 133 (316)
T cd05620 67 ---TKEHLFFVMEFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSK-GIIYRDLKLDNVMLDRDG------- 133 (316)
T ss_pred ---eCCEEEEEECCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCC-------
Confidence 667899999999 77888877654 3488999999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (316)
T cd05620 134 ------------------------------------HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSV 177 (316)
T ss_pred ------------------------------------CEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCccc
Confidence 49999999876431 223345689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|..||.+.+ .......+...
T Consensus 178 DiwslGvil~el~~g~~Pf~~~~------~~~~~~~~~~~---------------------------------------- 211 (316)
T cd05620 178 DWWSFGVLLYEMLIGQSPFHGDD------EDELFESIRVD---------------------------------------- 211 (316)
T ss_pred chhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhC----------------------------------------
Confidence 99999999999999999997544 11111111110
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCH-HHHhcCCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASA-ADCLRHPWLNPRR 390 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell~hp~~~~~~ 390 (393)
...++...+..+.++|++||..||.+||++ +++++||||++..
T Consensus 212 --~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 212 --TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred --CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 001122345678899999999999999997 5899999998763
No 88
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.5e-40 Score=313.05 Aligned_cols=290 Identities=23% Similarity=0.340 Sum_probs=208.7
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
..++|++.++||+|+||.||+|.+..++..+|+|.+.... .....+.+|+.+++.+ .|+|++++
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~ 68 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC--------------NSPYIVGF 68 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC--------------CCCcccce
Confidence 3468999999999999999999999999999999877532 2235678999999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.+.++||||+ +++|.+++... ..++...+..++.|++.||+|||+..+++|+||||+||+++.++
T Consensus 69 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~- 141 (333)
T cd06650 69 YGAFY----SDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG- 141 (333)
T ss_pred eEEEE----ECCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC-
Confidence 99887 566899999999 77888888654 34888999999999999999999754799999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|+|||++.+..+
T Consensus 142 ------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 179 (333)
T cd06650 142 ------------------------------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 179 (333)
T ss_pred ------------------------------------------CEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCC
Confidence 4999999998754332 234468999999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe--eeccCCCc-
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF--RRIDNLKP- 338 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 338 (393)
+.++|+|||||++|+|++|+.||...... .+....+.......... .........+.. ...+...+
T Consensus 180 ~~~~DvwslG~il~~l~~g~~p~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (333)
T cd06650 180 SVQSDIWSMGLSLVEMAIGRYPIPPPDAK----------ELELMFGCPVEGDPAES-ETSPRPRPPGRPLSSYGPDSRPP 248 (333)
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCcchh----------HHHHHhcCcccCCcccc-ccCcccCCccchhhhhccccccc
Confidence 99999999999999999999999654321 11111111000000000 000000000000 00000000
Q ss_pred chhHHHH----hhh-ccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 339 WGLYQVL----TEK-YHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~----~~~-~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....... ... ..++ ...+.++.+||.+||..||++|||+.|+++||||+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 249 MAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred ccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 0011111 100 0111 1246778999999999999999999999999999875
No 89
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.9e-40 Score=304.20 Aligned_cols=277 Identities=27% Similarity=0.417 Sum_probs=208.6
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..++..||+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 66 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL--------------QHPNIVCLQD 66 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc--------------CCCCEeeeEE
Confidence 4899999999999999999999999999999886432 2235678899999999 7999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+.+++.+.+..... ..++...+..++.|++.||+|||+. +++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~--- 138 (285)
T cd07861 67 VLM----QESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLIDNKG--- 138 (285)
T ss_pred EEe----eCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEEcCCC---
Confidence 887 5678999999998888888765332 4588999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-C
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~ 260 (393)
.++|+|||++...... .....+++.|+|||.+.+. .
T Consensus 139 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 178 (285)
T cd07861 139 ----------------------------------------VIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPR 178 (285)
T ss_pred ----------------------------------------cEEECcccceeecCCCcccccCCcccccccChHHhcCCCC
Confidence 4999999998755432 2234568899999998764 4
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|+.||.+.. ....+..+....+..+...+........+ .. ... ...
T Consensus 179 ~~~~~Dv~slG~il~~l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~-~~~-- 243 (285)
T cd07861 179 YSTPVDIWSIGTIFAEMATKKPLFHGDS------EIDQLFRIFRILGTPTEDVWPGVTSLPDY-KN-----TFP-KWK-- 243 (285)
T ss_pred cCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHHhCCCChhhhhcchhhHHH-Hh-----hcc-ccC--
Confidence 6889999999999999999999997654 33444444444444333332211100000 00 000 000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... .....+.++.++|++||..||.+|||+.++++||||
T Consensus 244 -~~~~~~---~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 244 -KGSLRS---AVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred -cchhHH---hcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 000000 112356788899999999999999999999999998
No 90
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-40 Score=316.98 Aligned_cols=285 Identities=28% Similarity=0.366 Sum_probs=207.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+|++.+.||+|+||.||+|.+..+++.||+|+... .....|+.+++.+ .|+|++++++.
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-----~~~~~E~~~l~~l--------------~h~~iv~~~~~ 125 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-----GTTLIEAMLLQNV--------------NHPSVIRMKDT 125 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc-----cccHHHHHHHHhC--------------CCCCCcChhhe
Confidence 3579999999999999999999999999999997543 2345789999988 89999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+. .+...++|||++.+++..++.... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 126 ~~----~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~----- 194 (357)
T PHA03209 126 LV----SGAITCMVLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFINDVD----- 194 (357)
T ss_pred EE----eCCeeEEEEEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC-----
Confidence 87 566789999999889998886543 4589999999999999999999998 999999999999997766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||..|+|||++.+..++.+
T Consensus 195 --------------------------------------~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 236 (357)
T PHA03209 195 --------------------------------------QVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSK 236 (357)
T ss_pred --------------------------------------CEEEecCccccccccCcccccccccccccCCeecCCCCCCch
Confidence 49999999987432 22334568999999999999889999
Q ss_pred hhHHhHHHHHHHHHhCC-CCCCCCCCC---CCCCcHHHHHHHHHHhCCCChHHHhcCc--ccccccCCCCCeeeccCCCc
Q psy12288 265 ADIWSTACMAFELATGD-YLFDPKAGK---EYSRDDDHLAHIVELVGPIPKEVLSQGK--KTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~-~pf~~~~~~---~~~~~~~~~~~~~~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 338 (393)
+|||||||++|+|+++. .+|...... .......++..+....+..|..+..... ....+....... ..+
T Consensus 237 ~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 311 (357)
T PHA03209 237 ADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLE-----RQP 311 (357)
T ss_pred hhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccC-----CCc
Confidence 99999999999999854 444332211 0111233445555555554443321100 000000000000 000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
......... ...+..+.+||.+||+.||.+|||+.|+|+||||+++
T Consensus 312 ~~~~~~~~~-----~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 312 YTRYPCFQR-----VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred ccccHHHhc-----cCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 000111111 1234566789999999999999999999999999864
No 91
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.5e-40 Score=302.90 Aligned_cols=277 Identities=29% Similarity=0.458 Sum_probs=211.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+|+.||+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l--------------~h~~i~~~~~ 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL--------------KHKNIVRLYD 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc--------------CCCCeeeHHH
Confidence 5899999999999999999999999999999886432 2234567899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++++||+++++.+.+.... ..+++..++.++.||+.||.|||+. +++|+||||+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dl~~~nil~~~~~---- 136 (284)
T cd07839 67 VLH----SDKKLTLVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLINKNG---- 136 (284)
T ss_pred Hhc----cCCceEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEcCCC----
Confidence 987 566899999999889988876543 4589999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC-C
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG-Y 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~-~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+.. +
T Consensus 137 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 177 (284)
T cd07839 137 ---------------------------------------ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 177 (284)
T ss_pred ---------------------------------------cEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCccc
Confidence 4999999998765432 23346688999999987754 6
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|..||..... ....+..+.+..+..+...+......... .........
T Consensus 178 ~~~~DiwslG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-- 243 (284)
T cd07839 178 STSIDMWSAGCIFAELANAGRPLFPGND-----VDDQLKRIFRLLGTPTEESWPGVSKLPDY-------KPYPMYPAT-- 243 (284)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCcCCCC-----HHHHHHHHHHHhCCCChHHhHHhhhcccc-------cccCCCCCc--
Confidence 8999999999999999999888643321 34566667776666554433221111100 000000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.... ......+..+.++|++||..||.+|||++|+++||||
T Consensus 244 -~~~~---~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 244 -TSLV---NVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred -chhh---hhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0000 1112356788899999999999999999999999998
No 92
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3e-41 Score=317.66 Aligned_cols=254 Identities=24% Similarity=0.375 Sum_probs=201.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||+|+++.... ....+.+|+.+++.+ .|++++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~--------------~~~~i~~~ 66 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS--------------NSPWIPQL 66 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCCCcce
Confidence 379999999999999999999999999999999875432 334567788888877 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. .....++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~-~i~H~Dlkp~NIll~~~~- 139 (330)
T cd05601 67 QYAFQ----DKDNLYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQM-GYVHRDIKPENVLIDRTG- 139 (330)
T ss_pred eeEEe----cCCeEEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeEcccCchHheEECCCC-
Confidence 88876 567899999999 788888876642 3589999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHh-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLI- 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~- 257 (393)
.++|+|||++....... ....+|+.|+|||++.
T Consensus 140 ------------------------------------------~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (330)
T cd05601 140 ------------------------------------------HIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTT 177 (330)
T ss_pred ------------------------------------------CEEeccCCCCeECCCCCceeeecccCCccccCHHHhcc
Confidence 49999999987654321 2246899999999987
Q ss_pred -----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 258 -----GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 258 -----~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
...++.++|||||||++|+|++|+.||...+ .......+..... ...
T Consensus 178 ~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~~~~------------~~~---------- 229 (330)
T cd05601 178 MNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT------SAKTYNNIMNFQR------------FLK---------- 229 (330)
T ss_pred ccccccCCCCCcceeecccceeeeeccCCCCCCCCC------HHHHHHHHHcCCC------------ccC----------
Confidence 3457899999999999999999999997544 1122222211000 000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+.....+..+.+||.+||. ||.+|||++++++||||...
T Consensus 230 ----------------~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 230 ----------------FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 00012345678899999998 99999999999999999864
No 93
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-40 Score=321.34 Aligned_cols=296 Identities=23% Similarity=0.323 Sum_probs=211.3
Q ss_pred CCccccccCC-eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 15 GGYCPVQIGD-LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 15 ~~~~~~~~~~-~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
|...|...+. ..+.+|.+.+.||+|+||.||+|.+..+++.||||... .....+|+.+++.+
T Consensus 155 g~~~~~~~~~~~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L------------ 217 (461)
T PHA03211 155 GCKPPSEVAKVVAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRL------------ 217 (461)
T ss_pred CCCCccchhcccccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHC------------
Confidence 3344444443 33568999999999999999999999999999999643 23467899999999
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
.|+||+++++.+. .+...++|||++.++|...+.... ..+++..++.++.|++.||+|||++ ||+||||||+
T Consensus 218 --~HpnIv~l~~~~~----~~~~~~lv~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDLKP~ 289 (461)
T PHA03211 218 --SHPAVLALLDVRV----VGGLTCLVLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGE-GIIHRDIKTE 289 (461)
T ss_pred --CCCCCCcEEEEEE----ECCEEEEEEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEEECcCCHH
Confidence 8999999998876 566789999999889998886543 3589999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCC
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTR 248 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~ 248 (393)
|||++.++ .++|+|||+++..... .....||.
T Consensus 290 NILl~~~~-------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~~GT~ 326 (461)
T PHA03211 290 NVLVNGPE-------------------------------------------DICLGDFGAACFARGSWSTPFHYGIAGTV 326 (461)
T ss_pred HEEECCCC-------------------------------------------CEEEcccCCceecccccccccccccCCCc
Confidence 99997665 4999999998755322 11345899
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCC-CCCCCCcHHHHHHHHHHhCCCChHHHhcC--cccccccC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA-GKEYSRDDDHLAHIVELVGPIPKEVLSQG--KKTLRYFT 325 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~-~~~~~~~~~~~~~~~~~~g~~p~~~~~~~--~~~~~~~~ 325 (393)
.|+|||++.+..++.++|||||||++|||++|..++.... .........++..++...+.....+.... +....+..
T Consensus 327 ~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 406 (461)
T PHA03211 327 DTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRH 406 (461)
T ss_pred CCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHh
Confidence 9999999999989999999999999999999876554332 22222334445555544332111110000 00000000
Q ss_pred CCC-CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 326 PQG-NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 326 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
... ..........|. . + ...+..+.+||.+||+.||.+|||+.|+|+||||++
T Consensus 407 ~~~~~~~~~~~~~~~~------~---~-~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 407 RAARNRRPAYTRPAWT------R---Y-YKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred hhhcccCCccCCcchh------h---h-ccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 000 000000000000 0 0 123456789999999999999999999999999975
No 94
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5.6e-41 Score=319.48 Aligned_cols=251 Identities=19% Similarity=0.363 Sum_probs=200.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+..|+.++..+ .|++++++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~iv~~ 66 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA--------------DGAWVVKM 66 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC--------------CCCCEeeE
Confidence 47999999999999999999999999999999987432 2235567788888888 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.++++||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~-givHrDLkp~NIli~~~~- 138 (360)
T cd05627 67 FYSFQ----DKRNLYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQL-GFIHRDIKPDNLLLDAKG- 138 (360)
T ss_pred EEEEE----cCCEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCC-
Confidence 98887 677899999999 78888887654 3488999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------------- 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------------- 240 (393)
.++|+|||++......
T Consensus 139 ------------------------------------------~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (360)
T cd05627 139 ------------------------------------------HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNM 176 (360)
T ss_pred ------------------------------------------CEEEeeccCCcccccccccccccccccCCccccccccc
Confidence 4999999987643210
Q ss_pred ----------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH
Q psy12288 241 ----------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304 (393)
Q Consensus 241 ----------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 304 (393)
....+||+.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+. ......+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~------~~~~~~i~~ 250 (360)
T cd05627 177 NSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP------QETYRKVMN 250 (360)
T ss_pred ccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCH------HHHHHHHHc
Confidence 1124689999999999999999999999999999999999999975542 122221111
Q ss_pred HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCCCc---CHHH
Q psy12288 305 LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKLRA---SAAD 379 (393)
Q Consensus 305 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rp---t~~e 379 (393)
.... ..++ ...+..+.++|.+|+ .||.+|+ ++++
T Consensus 251 ~~~~----------------------------------------~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~e 289 (360)
T cd05627 251 WKET----------------------------------------LVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEE 289 (360)
T ss_pred CCCc----------------------------------------eecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHH
Confidence 0000 0011 124567889999977 4999999 4899
Q ss_pred HhcCCCCCCC
Q psy12288 380 CLRHPWLNPR 389 (393)
Q Consensus 380 ll~hp~~~~~ 389 (393)
+++||||.++
T Consensus 290 i~~hp~f~~~ 299 (360)
T cd05627 290 IKSHPFFEGV 299 (360)
T ss_pred HhcCCCCCCC
Confidence 9999999975
No 95
>KOG0611|consensus
Probab=100.00 E-value=7.2e-42 Score=306.88 Aligned_cols=253 Identities=28% Similarity=0.477 Sum_probs=213.5
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
---.+..+|++.+.||.|+||.|-+|+....|+.||||.++++. ...-.+++|+++|..+ +|
T Consensus 47 hkhnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL--------------NH 112 (668)
T KOG0611|consen 47 HKHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL--------------NH 112 (668)
T ss_pred cccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc--------------CC
Confidence 33345679999999999999999999999999999999887543 2334568999999999 99
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
|||+.++.+|. +.+.++|||||. +|.|.+++.++ +.+++.+++.+++||..|+.|+|++ +++|||||.+|||
T Consensus 113 PhII~IyEVFE----NkdKIvivMEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHkn-rVvHRDLKLENIL 185 (668)
T KOG0611|consen 113 PHIIQIYEVFE----NKDKIVIVMEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKN-RVVHRDLKLENIL 185 (668)
T ss_pred Cceeehhhhhc----CCceEEEEEEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhc-cceecccchhhee
Confidence 99999999998 788899999999 99999999887 4599999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhH
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVE 254 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE 254 (393)
+|.|++ +|++|||++..+... ..+.+|++-|.+||
T Consensus 186 LD~N~N-------------------------------------------iKIADFGLSNly~~~kfLqTFCGSPLYASPE 222 (668)
T KOG0611|consen 186 LDQNNN-------------------------------------------IKIADFGLSNLYADKKFLQTFCGSPLYASPE 222 (668)
T ss_pred ecCCCC-------------------------------------------eeeeccchhhhhccccHHHHhcCCcccCCcc
Confidence 999884 999999998766433 45779999999999
Q ss_pred HHhcCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+..+.+| ++.+|.|||||++|-|+.|..||.+.+. ...+..|.. | + +
T Consensus 223 IvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh------k~lvrQIs~--G------------a--Y---------- 270 (668)
T KOG0611|consen 223 IVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH------KRLVRQISR--G------------A--Y---------- 270 (668)
T ss_pred ccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH------HHHHHHhhc--c------------c--c----------
Confidence 9999998 7899999999999999999999986552 111111111 0 0 0
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
+..+.+..+.-||++||..||++|.|+.++-.|=|++
T Consensus 271 -----------------rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 271 -----------------REPETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred -----------------cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 0123345566899999999999999999999998875
No 96
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.9e-40 Score=311.88 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=197.4
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|++..+++.||+|+++... .....+..|..++..+. .|+|++++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-------------~hp~iv~~~~~~~- 66 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-------------NHPFLVGLHSCFQ- 66 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC-------------CCCcCCceeeEEE-
Confidence 36899999999999999999999999987532 12234567777776652 6899999999887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.....++||||+ +++|...+... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~E~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dikp~Nili~~~~------- 133 (329)
T cd05618 67 ---TESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEG------- 133 (329)
T ss_pred ---eCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCC-------
Confidence 567899999999 67887776554 3589999999999999999999998 999999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (329)
T cd05618 134 ------------------------------------HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 177 (329)
T ss_pred ------------------------------------CEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCcc
Confidence 49999999886432 223345689999999999999899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCC--cHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSR--DDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
|+|||||++|+|++|+.||.......... ....+. ..
T Consensus 178 DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~-----------------------------------------~~ 216 (329)
T cd05618 178 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF-----------------------------------------QV 216 (329)
T ss_pred ceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHH-----------------------------------------HH
Confidence 99999999999999999996432211100 000000 11
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcC------HHHHhcCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS------AADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~ell~hp~~~~~ 389 (393)
+......++...+..+.++|++||..||.+||+ +.++++||||++.
T Consensus 217 i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 217 ILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred HhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 112222344556778889999999999999998 4799999999875
No 97
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.5e-40 Score=311.73 Aligned_cols=245 Identities=23% Similarity=0.319 Sum_probs=195.8
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
++||+|+||.||+|.+..+++.||+|++.... .....+..|..+++.+. .|++++++++.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-------------~hp~i~~~~~~~~- 66 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA-------------KHPFLTALHCCFQ- 66 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc-------------CCCCccceeeEEE-
Confidence 36899999999999999999999999987532 12234556777776552 6899999999887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+..+++||||+ +++|...+... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~Nill~~~~------- 133 (321)
T cd05591 67 ---TKDRLFFVMEYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRH-GVIYRDLKLDNILLDAEG------- 133 (321)
T ss_pred ---cCCeEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCC-------
Confidence 667899999999 77887777654 3488999999999999999999998 999999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (321)
T cd05591 134 ------------------------------------HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSV 177 (321)
T ss_pred ------------------------------------CEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCcc
Confidence 49999999886532 123344689999999999988899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|+.||...+ ....+..+..
T Consensus 178 DvwslG~il~el~tg~~Pf~~~~------~~~~~~~i~~----------------------------------------- 210 (321)
T cd05591 178 DWWALGVLMYEMMAGQPPFEADN------EDDLFESILH----------------------------------------- 210 (321)
T ss_pred ceechhHHHHHHhcCCCCCCCCC------HHHHHHHHHc-----------------------------------------
Confidence 99999999999999999997554 2222222211
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCc-------CHHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRA-------SAADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-------t~~ell~hp~~~~~ 389 (393)
....++...+..+.++|.+||..||.+|| +++++++||||.+.
T Consensus 211 -~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 211 -DDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred -CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 11112233456788999999999999999 99999999999874
No 98
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.5e-40 Score=305.58 Aligned_cols=248 Identities=24% Similarity=0.316 Sum_probs=195.2
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||+|.+..+++.||+|.+..... ..+.+..|+.+++.+ .|++++++.+.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~~~~i~~~~~~~~--- 63 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV--------------HSRFIVSLAYAFQ--- 63 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC--------------CCCcEeeeeEEEc---
Confidence 6999999999999999999999998864321 124456789999998 7899999988776
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+...++||||+ +++|...+... ....+++..+..++.|++.||+|||++ +++||||||+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~------- 134 (280)
T cd05608 64 -TKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDG------- 134 (280)
T ss_pred -CCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC-------
Confidence 567799999999 67777665331 224588999999999999999999998 999999999999997665
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++...... .....+|+.|+|||++.+..++.++
T Consensus 135 ------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~ 178 (280)
T cd05608 135 ------------------------------------NVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSV 178 (280)
T ss_pred ------------------------------------CEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccc
Confidence 4999999998755322 2234688999999999999899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|+||||+++|+|++|+.||....... ........ +.
T Consensus 179 DvwslG~il~el~~g~~pf~~~~~~~------~~~~~~~~--------------------------------------~~ 214 (280)
T cd05608 179 DYFALGVTLYEMIAARGPFRARGEKV------ENKELKQR--------------------------------------IL 214 (280)
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCcch------hHHHHHHh--------------------------------------hc
Confidence 99999999999999999997543211 00000000 00
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+++.+||+.||++|| |++++++||||++.
T Consensus 215 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 215 NDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred ccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 011112344667888999999999999999 88999999999875
No 99
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.4e-41 Score=314.27 Aligned_cols=244 Identities=23% Similarity=0.347 Sum_probs=195.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+ .|++++++.+.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~hp~i~~~~~~~~- 65 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS--------------RHPFLTALKYSFQ- 65 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCCCCceEEEEE-
Confidence 36899999999999999999999999987532 1223456677788877 7899999988876
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCeeeccCCCCceEEeechhHHhHh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.+...++||||+ +++|...+... ..+++..+..++.||+.||+|||+ . |++||||||+||+++.++
T Consensus 66 ---~~~~~~lv~E~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~-~ivHrDikp~NIll~~~~------ 133 (325)
T cd05594 66 ---THDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDG------ 133 (325)
T ss_pred ---cCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCCeEEECCCC------
Confidence 667899999999 67787776554 348899999999999999999997 6 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||+.|+|||++.+..++.+
T Consensus 134 -------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 176 (325)
T cd05594 134 -------------------------------------HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA 176 (325)
T ss_pred -------------------------------------CEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCc
Confidence 49999999886432 12234568999999999999889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|+|++|..||...+. ......+.
T Consensus 177 ~DiwslG~il~el~tG~~Pf~~~~~------~~~~~~i~----------------------------------------- 209 (325)
T cd05594 177 VDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELIL----------------------------------------- 209 (325)
T ss_pred cccccccceeeeeccCCCCCCCCCH------HHHHHHHh-----------------------------------------
Confidence 9999999999999999999965431 11111110
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.++|++||..||.+|+ ++.++++||||.+.
T Consensus 210 -~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 210 -MEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred -cCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 011112344567788999999999999997 89999999999875
No 100
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.3e-40 Score=309.68 Aligned_cols=245 Identities=25% Similarity=0.364 Sum_probs=192.6
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
++||+|+||.||+|.+..+++.||+|+++.... ..+....|..++... ..|++++++++.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-------------~~hp~i~~~~~~~~- 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA-------------WEHPFLTHLFCTFQ- 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc-------------cCCCCccceeeEEE-
Confidence 369999999999999999999999999875321 123334455555443 27899999998886
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+.+.++||||+ +++|...+... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~e~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dlkp~Nill~~~~------- 133 (316)
T cd05592 67 ---TKEHLFFVMEYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKK-GIIYRDLKLDNVLLDKDG------- 133 (316)
T ss_pred ---cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHeEECCCC-------
Confidence 567899999999 77888777654 3489999999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (316)
T cd05592 134 ------------------------------------HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESV 177 (316)
T ss_pred ------------------------------------CEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcc
Confidence 49999999987542 122345689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|+.||.+.+ .......+.. .
T Consensus 178 DvwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~---~------------------------------------- 211 (316)
T cd05592 178 DWWSFGVLLYEMLIGQSPFHGED------EDELFDSILN---D------------------------------------- 211 (316)
T ss_pred cchhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHc---C-------------------------------------
Confidence 99999999999999999997544 1122221111 0
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCH-HHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASA-ADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell~hp~~~~~ 389 (393)
...++...+..+.++|.+||..||.+||++ .++++||||+..
T Consensus 212 --~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 212 --RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred --CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 011223345677899999999999999986 589999999875
No 101
>KOG0197|consensus
Probab=100.00 E-value=2.7e-41 Score=315.00 Aligned_cols=243 Identities=24% Similarity=0.344 Sum_probs=203.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
.+++++.||+|.||.||.|.... ...||+|.++......+.+.+|+.+|+.+ .|++++++++++.
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L--------------~H~~lV~l~gV~~ 271 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKL--------------RHEKLVKLYGVCT 271 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhC--------------cccCeEEEEEEEe
Confidence 45678899999999999997753 34699999998777788999999999999 8999999999997
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
....++|||||+ .|+|++++.......++..+...++.||++|++||.++ ++|||||-++||||+.+.
T Consensus 272 ----~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~-~~IHRDLAARNiLV~~~~------ 340 (468)
T KOG0197|consen 272 ----KQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK-NYIHRDLAARNILVDEDL------ 340 (468)
T ss_pred ----cCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC-CccchhhhhhheeeccCc------
Confidence 444699999999 89999999886667799999999999999999999999 999999999999998876
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-CC---CCCCCCchhHHHhcCCCCc
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-DE---IQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-~~---~~t~~y~aPE~~~~~~~~~ 263 (393)
.+|++|||+++....... .. --+.-|.|||.+..+.++.
T Consensus 341 -------------------------------------~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~ 383 (468)
T KOG0197|consen 341 -------------------------------------VVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSS 383 (468)
T ss_pred -------------------------------------eEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCccc
Confidence 599999999995443321 11 2256799999999999999
Q ss_pred hhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
+||||||||+||||+| |+.|+...+. .+. +....+.+++
T Consensus 384 kSDVWSFGVlL~E~fT~G~~py~~msn------~ev---------------~~~le~GyRl------------------- 423 (468)
T KOG0197|consen 384 KSDVWSFGVLLWELFTYGRVPYPGMSN------EEV---------------LELLERGYRL------------------- 423 (468)
T ss_pred ccceeehhhhHHHHhccCCCCCCCCCH------HHH---------------HHHHhccCcC-------------------
Confidence 9999999999999999 9999976652 222 2222222222
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 381 (393)
+-|..+++.+.++|..||..+|++|||++.+.
T Consensus 424 -------p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 424 -------PRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred -------CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 23477889999999999999999999998664
No 102
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.2e-40 Score=308.64 Aligned_cols=245 Identities=22% Similarity=0.340 Sum_probs=193.6
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|++..+++.||+|+++... ........|..++... ..|++++++++.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-------------~~hp~iv~~~~~~~- 66 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-------------WEHPFLTHLYCTFQ- 66 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-------------cCCCcCcceEEEEE-
Confidence 46899999999999999999999999987542 1223345566666543 17899999998887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
....+++||||+ +++|...+... ..++..++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~-~ivHrdikp~Nil~~~~~------- 133 (316)
T cd05619 67 ---TKENLFFVMEYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK-GIVYRDLKLDNILLDTDG------- 133 (316)
T ss_pred ---eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCC-------
Confidence 567899999999 78888887654 3488899999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||..|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (316)
T cd05619 134 ------------------------------------HIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSV 177 (316)
T ss_pred ------------------------------------CEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchh
Confidence 49999999886432 122345689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|+||+||++|+|++|..||.+.+ .......+.. ..
T Consensus 178 DvwslG~il~el~~G~~pf~~~~------~~~~~~~i~~-~~-------------------------------------- 212 (316)
T cd05619 178 DWWSFGVLLYEMLIGQSPFHGHD------EEELFQSIRM-DN-------------------------------------- 212 (316)
T ss_pred hhhhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh-CC--------------------------------------
Confidence 99999999999999999997543 1111111110 00
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHH-HHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAA-DCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-ell~hp~~~~~ 389 (393)
..++...+..+.++|.+||..||.+||++. ++++||||+.+
T Consensus 213 ---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 213 ---PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred ---CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 001223456778999999999999999996 99999999875
No 103
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.3e-40 Score=310.57 Aligned_cols=244 Identities=24% Similarity=0.366 Sum_probs=196.3
Q ss_pred EEecccCceEEEEEEeC---CCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 34 RKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.||+|+||.||+|++. .+++.||+|+++... .....+.+|+.+++.+ .|+||+++++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l--------------~hp~iv~~~~ 67 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV--------------KHPFIVDLIY 67 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC--------------CCCchhceee
Confidence 68999999999999864 468899999987532 2234567899999998 8999999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .++..++||||+ +++|...+... ..+.+..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 68 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~--- 137 (323)
T cd05584 68 AFQ----TGGKLYLILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQ-GIIYRDLKPENILLDAQG--- 137 (323)
T ss_pred EEe----cCCeEEEEEeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCC---
Confidence 887 567899999999 77888877654 3478889999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++..... ......||+.|+|||++.+..+
T Consensus 138 ----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 177 (323)
T cd05584 138 ----------------------------------------HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGH 177 (323)
T ss_pred ----------------------------------------CEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCC
Confidence 499999999864321 1223468999999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|+.||...+ ....+..+.
T Consensus 178 ~~~~DiwslG~il~ell~G~~pf~~~~------~~~~~~~~~-------------------------------------- 213 (323)
T cd05584 178 GKAVDWWSLGALMYDMLTGAPPFTAEN------RKKTIDKIL-------------------------------------- 213 (323)
T ss_pred CCcceecccHHHHHHHhcCCCCCCCCC------HHHHHHHHH--------------------------------------
Confidence 999999999999999999999997544 111111111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.++|++||..||++|| +++++++||||+..
T Consensus 214 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 214 ----KGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred ----cCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 111223344567788999999999999999 89999999999764
No 104
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.7e-40 Score=309.49 Aligned_cols=245 Identities=25% Similarity=0.361 Sum_probs=196.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|+++... ........|..+++.+. .|++++++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-------------~h~~i~~~~~~~~- 66 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-------------KHPFLTQLHSCFQ- 66 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc-------------CCCCccceeeEEE-
Confidence 36999999999999999999999999987542 22344556777777662 6899999999887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
....+++||||+ +++|...+... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~------- 133 (318)
T cd05570 67 ---TKDRLFFVMEYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHER-GIIYRDLKLDNVLLDSEG------- 133 (318)
T ss_pred ---cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEccCCCHHHeEECCCC-------
Confidence 567899999999 77888777654 3589999999999999999999998 999999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......+|+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~ 177 (318)
T cd05570 134 ------------------------------------HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAV 177 (318)
T ss_pred ------------------------------------cEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcch
Confidence 49999999886421 122334689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|+|||||++|+|++|+.||...+ .......+..
T Consensus 178 DiwslGvil~~l~~G~~pf~~~~------~~~~~~~i~~----------------------------------------- 210 (318)
T cd05570 178 DWWALGVLLYEMLAGQSPFEGDD------EDELFQSILE----------------------------------------- 210 (318)
T ss_pred hhhhHHHHHHHHhhCCCCCCCCC------HHHHHHHHHc-----------------------------------------
Confidence 99999999999999999996543 1111111110
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCH-----HHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASA-----ADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~ 389 (393)
....++...+..+.+||++||..||.+||++ .++++||||++.
T Consensus 211 -~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 211 -DEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred -CCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 0111223455678899999999999999999 999999999875
No 105
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5e-40 Score=302.94 Aligned_cols=255 Identities=24% Similarity=0.367 Sum_probs=201.6
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|++.+.||+|+||.||+|.+..+++.||+|.+...... ...+.+|+.+++.+ .|++++++.
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~~~~i~~~~ 66 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV--------------NSRFVVSLA 66 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC--------------CCCCeeeee
Confidence 378889999999999999999999999999988643221 23456799999998 788899988
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .+...++||||+ +++|.+.+.......+++.++..++.|++.||.|||+. +++|+||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nil~~~~~-- 139 (285)
T cd05630 67 YAYE----TKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDDHG-- 139 (285)
T ss_pred EEEe----cCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCC--
Confidence 8876 567899999999 77887777554444588999999999999999999998 999999999999997665
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++..... ......|+..|+|||++.+..+
T Consensus 140 -----------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 178 (285)
T cd05630 140 -----------------------------------------HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 178 (285)
T ss_pred -----------------------------------------CEEEeeccceeecCCCccccCCCCCccccChHHHcCCCC
Confidence 499999998875432 2233468999999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||+|+++|+|++|+.||....... .......... ..+
T Consensus 179 ~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~---~~~~~~~~~~---~~~------------------------------- 221 (285)
T cd05630 179 TFSPDWWALGCLLYEMIAGQSPFQQRKKKI---KREEVERLVK---EVQ------------------------------- 221 (285)
T ss_pred CCccccHHHHHHHHHHHhCCCCCCCCCccc---hHHHHHhhhh---hhh-------------------------------
Confidence 999999999999999999999997543211 0011111100 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
..++...+..+.+|+++||+.||++||| ++|+++||||+..
T Consensus 222 -------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 222 -------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred -------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 0112345567889999999999999999 9999999999864
No 106
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=6.1e-40 Score=308.73 Aligned_cols=256 Identities=19% Similarity=0.304 Sum_probs=198.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|..+++.+ .|++++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~ 66 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG--------------DRRWITNL 66 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC--------------CCCCCCce
Confidence 47999999999999999999999999999999987422 2234567788888887 78899999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. .+.++++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+|||++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~- 139 (331)
T cd05597 67 HYAFQ----DENNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQL-GYVHRDIKPDNVLLDKNG- 139 (331)
T ss_pred EEEEe----cCCeEEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeEECCCCHHHEEECCCC-
Confidence 88887 667899999999 888888886532 4588999999999999999999998 999999999999997766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++....... ....||+.|+|||++..
T Consensus 140 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (331)
T cd05597 140 ------------------------------------------HIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQA 177 (331)
T ss_pred ------------------------------------------CEEEEECCceeecCCCCCccccceeccccccCHHHHhh
Confidence 49999999986543221 12358999999999974
Q ss_pred -----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 259 -----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 259 -----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
..++.++|||||||++|+|++|+.||.+.+. ......+.......+
T Consensus 178 ~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~------~~~~~~i~~~~~~~~----------------------- 228 (331)
T cd05597 178 MEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKEHFQ----------------------- 228 (331)
T ss_pred ccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH------HHHHHHHHcCCCccc-----------------------
Confidence 3468899999999999999999999975441 122221111000000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
........+..+.++|++||+.++.+ |++++++++||||++.
T Consensus 229 --------------~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 229 --------------FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred --------------CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 00001224667889999998765544 7899999999999875
No 107
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6.9e-40 Score=307.86 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=199.1
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|+++... ...+.+.+|..+++.+. .|++++++.+++.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~-------------~~~~i~~~~~~~~- 66 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS-------------SNPFLVGLHSCFQ- 66 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc-------------CCCCEeeEEEEEE-
Confidence 36999999999999999999999999987542 22344667888887773 5889999998887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nili~~~~------- 133 (327)
T cd05617 67 ---TTSRLFLVIEYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLLDADG------- 133 (327)
T ss_pred ---eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEeCCC-------
Confidence 567899999999 77887777654 3489999999999999999999998 999999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (327)
T cd05617 134 ------------------------------------HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177 (327)
T ss_pred ------------------------------------CEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchh
Confidence 49999999886432 223345689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|..||..............+.... .
T Consensus 178 DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~-----------------------------------------~ 216 (327)
T cd05617 178 DWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI-----------------------------------------L 216 (327)
T ss_pred eeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH-----------------------------------------H
Confidence 99999999999999999996543322111111111111 1
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcC------HHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRAS------AADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~ell~hp~~~~~ 389 (393)
.....++...+..+.++|.+||..||.+|++ ++++++||||+.+
T Consensus 217 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 217 EKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred hCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 1112233445677889999999999999998 4799999999875
No 108
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=9.5e-40 Score=306.39 Aligned_cols=250 Identities=21% Similarity=0.293 Sum_probs=198.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ........|..+++.+. .|++++++.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-------------~~~~i~~~~ 67 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD-------------KPPFLTQLH 67 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-------------CCCchhhee
Confidence 4788999999999999999999999999999987532 12234566777777662 456677777
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. ....+++||||+ +++|...+... ..+++.++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 68 ~~~~----~~~~~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~-~ivHrDikp~Nill~~~~-- 138 (323)
T cd05615 68 SCFQ----TVDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRR-GIIYRDLKLDNVMLDSEG-- 138 (323)
T ss_pred eEEe----cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCC--
Confidence 7776 566799999999 78888877654 3489999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++..... ......||+.|+|||++.+..
T Consensus 139 -----------------------------------------~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 177 (323)
T cd05615 139 -----------------------------------------HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQP 177 (323)
T ss_pred -----------------------------------------CEEEeccccccccCCCCccccCccCCccccCHHHHcCCC
Confidence 499999998875321 122346899999999999888
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+|||||++|+|++|..||.+.+ .......+..
T Consensus 178 ~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~~------------------------------------ 215 (323)
T cd05615 178 YGKSVDWWAYGVLLYEMLAGQPPFDGED------EDELFQSIME------------------------------------ 215 (323)
T ss_pred CCCccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHh------------------------------------
Confidence 9999999999999999999999997544 1222222211
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....++...+..+.+++.+||..||.+|++ .+++++||||+..
T Consensus 216 ------~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 216 ------HNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred ------CCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 111123345567889999999999999997 5799999999975
No 109
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.1e-40 Score=314.32 Aligned_cols=255 Identities=22% Similarity=0.379 Sum_probs=200.8
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.-.++|++.+.||+|+||.||+|++..+++.+|+|++.... .....+.+|..+++.+ .|+++
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~--------------~hp~i 105 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--------------NSPWV 105 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC--------------CCCCC
Confidence 33479999999999999999999999999999999986422 1234466788888887 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .+.+.++||||+ +++|.+++... .+++..++.++.||+.||+|||++ ||+||||||+||+++.
T Consensus 106 v~~~~~~~----~~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NIll~~ 177 (371)
T cd05622 106 VQLFYAFQ----DDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDK 177 (371)
T ss_pred CeEEEEEE----cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHEEECC
Confidence 99998887 677899999999 77888877553 388899999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEV 255 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~ 255 (393)
++ .++|+|||++...... .....||+.|+|||+
T Consensus 178 ~~-------------------------------------------~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~ 214 (371)
T cd05622 178 SG-------------------------------------------HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 214 (371)
T ss_pred CC-------------------------------------------CEEEEeCCceeEcCcCCcccccCcccCccccCHHH
Confidence 66 4999999998765432 224568999999999
Q ss_pred HhcCC----CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 256 LIGAG----YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 256 ~~~~~----~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
+.+.. ++.++|||||||++|+|++|..||.+.+ .......+.......+
T Consensus 215 l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~--------------------- 267 (371)
T cd05622 215 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMNHKNSLT--------------------- 267 (371)
T ss_pred HhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCccc---------------------
Confidence 97643 7889999999999999999999997544 2222222221111000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC---CcCHHHHhcCCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL---RASAADCLRHPWLNPR 389 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~---Rpt~~ell~hp~~~~~ 389 (393)
.+-....+..+.++|.+||. +|.+ |++++|+++||||++.
T Consensus 268 -----------------~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 268 -----------------FPDDNDISKEAKNLICAFLT-DREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred -----------------CCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhcCcccCCC
Confidence 00012456778899999998 5444 7799999999999874
No 110
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-40 Score=328.93 Aligned_cols=298 Identities=22% Similarity=0.341 Sum_probs=206.1
Q ss_pred ccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCC-ceEEE------------------EEEecccccchhhHHHHHH
Q psy12288 17 YCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDK-TFVAL------------------KIVKSDQVYADTARDEIVL 77 (393)
Q Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vai------------------K~~~~~~~~~~~~~~E~~~ 77 (393)
...+..++.+.++|+++++||+|+||.||+|...... ..+++ |.+.........+.+|+.+
T Consensus 137 ~~~~~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~i 216 (501)
T PHA03210 137 QAKLKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILA 216 (501)
T ss_pred chhcccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHH
Confidence 3345666778889999999999999999998764332 11222 2122222233556789999
Q ss_pred HHHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCC---CCCCHHHHHHHHHHHHH
Q psy12288 78 LKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY---KGIHIQNVRTIIKQVLE 154 (393)
Q Consensus 78 l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~---~~l~~~~~~~i~~ql~~ 154 (393)
++.+ .|+||+++++.+. .....+++++++++++..++..... .......++.++.||+.
T Consensus 217 l~~l--------------~HpnIv~l~~~~~----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~ 278 (501)
T PHA03210 217 LGRL--------------NHENILKIEEILR----SEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLC 278 (501)
T ss_pred HHhC--------------CCCCcCcEeEEEE----ECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHH
Confidence 9998 8999999999887 5567899999998898887754321 12345678889999999
Q ss_pred HHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcc
Q psy12288 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA 234 (393)
Q Consensus 155 ~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~ 234 (393)
||+|||++ ||+||||||+|||++.++ .+||+|||++
T Consensus 279 aL~yLH~~-gIiHrDLKP~NILl~~~~-------------------------------------------~vkL~DFGla 314 (501)
T PHA03210 279 AVEYIHDK-KLIHRDIKLENIFLNCDG-------------------------------------------KIVLGDFGTA 314 (501)
T ss_pred HHHHHHhC-CeecCCCCHHHEEECCCC-------------------------------------------CEEEEeCCCc
Confidence 99999998 999999999999998766 4999999999
Q ss_pred ccccCC----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCC
Q psy12288 235 CWIDDH----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP 310 (393)
Q Consensus 235 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p 310 (393)
...... .....||..|+|||++.+..++.++|||||||++|+|++|..++...... ....++..+....+..+
T Consensus 315 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~ 391 (501)
T PHA03210 315 MPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG---KPGKQLLKIIDSLSVCD 391 (501)
T ss_pred eecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC---CHHHHHHHHHHhcccCh
Confidence 765432 22346899999999999999999999999999999999987654333221 13344555554444322
Q ss_pred hHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 311 KEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.++.....+...+..... .. ..+......+.. ...+..+.++|.+||.+||.+|||+.|+|.||||.+.
T Consensus 392 ~~~p~~~~~~~~~i~~~~-~~----~~~~~~~~~~~~-----~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 392 EEFPDPPCKLFDYIDSAE-ID----HAGHSVPPLIRN-----LGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred hhcCCcHHHHHHHhhhhh-cc----cCccchhhHHHh-----cCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 222111111111110000 00 000001111111 1234567899999999999999999999999999864
No 111
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.1e-39 Score=295.89 Aligned_cols=252 Identities=30% Similarity=0.537 Sum_probs=201.4
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchh---hHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADT---ARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~---~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++++.||+|+||.||+|.+..+++.+|+|.+......... ..+|+.+++.+ .|++++++++.
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l--------------~~~~i~~~~~~ 66 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL--------------RHPNIVQILDV 66 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH--------------TBTTBCHEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc--------------ccccccccccc
Confidence 89999999999999999999999999999999865433332 24589999999 78999999888
Q ss_pred ceeecCCCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....+++||++. ++|.+.+... ..++..++..++.|++.||++||++ +++|+||||+||+++.++
T Consensus 67 ~~----~~~~~~~v~~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~-~i~H~dikp~NIl~~~~~---- 135 (260)
T PF00069_consen 67 FQ----DDNYLYIVMEYCPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSK-GIVHRDIKPENILLDENG---- 135 (260)
T ss_dssp EE----ESSEEEEEEEEETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHT-TEEESSBSGGGEEESTTS----
T ss_pred cc----cccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccccc----
Confidence 87 4777899999995 4888888733 3489999999999999999999998 999999999999998666
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHh-cCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLI-GAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~-~~~~ 261 (393)
.++|+|||.+... ........++..|+|||++. +...
T Consensus 136 ---------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 176 (260)
T PF00069_consen 136 ---------------------------------------EVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKY 176 (260)
T ss_dssp ---------------------------------------EEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSB
T ss_pred ---------------------------------------ccccccccccccccccccccccccccccccccccccccccc
Confidence 4899999998642 33344567899999999998 7778
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||.... .......+.........
T Consensus 177 ~~~~Di~slG~il~~l~~~~~p~~~~~------~~~~~~~~~~~~~~~~~------------------------------ 220 (260)
T PF00069_consen 177 TRKSDIWSLGIILYELLTGKLPFEESN------SDDQLEIIEKILKRPLP------------------------------ 220 (260)
T ss_dssp STHHHHHHHHHHHHHHHHSSSSSTTSS------HHHHHHHHHHHHHTHHH------------------------------
T ss_pred ccccccccccccccccccccccccccc------chhhhhhhhhccccccc------------------------------
Confidence 999999999999999999999997552 22222222222211000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
............+.++|.+||+.||++||++.++++||||
T Consensus 221 -----~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 221 -----SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp -----HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred -----ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 0000001223788999999999999999999999999997
No 112
>KOG0589|consensus
Probab=100.00 E-value=8e-41 Score=310.77 Aligned_cols=252 Identities=26% Similarity=0.407 Sum_probs=217.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|.+++++|+|+||.+++++++..+..+++|.+... ........+|+.++..+ .||||+.+.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~--------------~hP~iv~y~ 69 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL--------------LHPNIVEYK 69 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhc--------------cCCCeeeec
Confidence 5799999999999999999999999999999987643 23345678899999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++|.. ++..++|+|+|| ||++.+.+.+.+..-++++.+..++.|++.|+.|||++ +|+|||||+.||+++.++
T Consensus 70 ds~~~---~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~-~iLHRDlK~~Nifltk~~-- 143 (426)
T KOG0589|consen 70 DSFEE---DGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN-RVLHRDLKCANIFLTKDK-- 143 (426)
T ss_pred cchhc---CCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhhccccC--
Confidence 99982 344599999999 89999999888766799999999999999999999988 999999999999998887
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||+|+.+... ....+||+.|++||.+.+.+
T Consensus 144 -----------------------------------------~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~p 182 (426)
T KOG0589|consen 144 -----------------------------------------KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIP 182 (426)
T ss_pred -----------------------------------------ceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCC
Confidence 3899999999988654 34568999999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|..++|||||||++|||++-+.+|.+.+ ....+..+....
T Consensus 183 Yn~KSDiWsLGC~~yEm~~lk~aF~a~~------m~~Li~ki~~~~---------------------------------- 222 (426)
T KOG0589|consen 183 YNEKSDIWSLGCCLYEMCTLKPAFKASN------MSELILKINRGL---------------------------------- 222 (426)
T ss_pred CCccCcchhhcchHHHHHhcccccCccc------hHHHHHHHhhcc----------------------------------
Confidence 9999999999999999999999998766 333333333322
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
..+.+..++.++..+|+.||..+|+.||++.++|.+|.+.
T Consensus 223 -------~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 223 -------YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred -------CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 1235567889999999999999999999999999998765
No 113
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-39 Score=302.06 Aligned_cols=282 Identities=26% Similarity=0.376 Sum_probs=211.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ......+|+.+++.+ .|++++++.
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~ 72 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL--------------RHPNIVELK 72 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC--------------CCCCCcceE
Confidence 589999999999999999999999999999998864322 123456799999998 788999988
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+.. ......++||||+++++.+++.... ..+++.++..++.|++.||+|||+. |++|+||+|+||+++.++
T Consensus 73 ~~~~~--~~~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~--- 145 (309)
T cd07845 73 EVVVG--KHLDSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHEN-FIIHRDLKVSNLLLTDKG--- 145 (309)
T ss_pred EEEec--CCCCeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCC---
Confidence 88752 2335689999999888888876543 4589999999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-C
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~ 260 (393)
.++|+|||.+...... .....++..|+|||.+.+. .
T Consensus 146 ----------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 185 (309)
T cd07845 146 ----------------------------------------CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTT 185 (309)
T ss_pred ----------------------------------------CEEECccceeeecCCccCCCCcccccccccChhhhcCCCC
Confidence 4999999998765432 2233457789999998764 5
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|++||...+ ..+.+..+....+..+...+......... ..... .....
T Consensus 186 ~~~~~DvwslG~il~el~~g~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~- 252 (309)
T cd07845 186 YTTAIDMWAVGCILAELLAHKPLLPGKS------EIEQLDLIIQLLGTPNESIWPGFSDLPLV----GKFTL--PKQPY- 252 (309)
T ss_pred cCchHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCChhhchhhhccccc----ccccc--cCCCC-
Confidence 7899999999999999999999997655 55666667666665544433221111000 00000 00000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....... ...+..+.++|.+||..||++|||++|+++||||++
T Consensus 253 --~~~~~~~---~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 253 --NNLKHKF---PWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred --CchHHhc---cccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 0000000 123567789999999999999999999999999985
No 114
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.8e-40 Score=313.86 Aligned_cols=251 Identities=25% Similarity=0.345 Sum_probs=195.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ .|+||+++++
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 139 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDV--------------NHPNVVKCHD 139 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC--------------CCCCcceeee
Confidence 57899999999999999999999999999999986432 2245678899999998 8999999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+..+++||||+ +++|... ....+..+..++.||+.||+|||++ |++||||||+|||++.++
T Consensus 140 ~~~----~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~--- 205 (353)
T PLN00034 140 MFD----HNGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRR-HIVHRDIKPSNLLINSAK--- 205 (353)
T ss_pred Eec----cCCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCC---
Confidence 886 567799999999 5555432 2256778889999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC--
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-- 259 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-- 259 (393)
.++|+|||++...... .....||..|+|||.+...
T Consensus 206 ----------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 245 (353)
T PLN00034 206 ----------------------------------------NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLN 245 (353)
T ss_pred ----------------------------------------CEEEcccccceecccccccccccccCccccCccccccccc
Confidence 4999999998765432 2345789999999987532
Q ss_pred ---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 260 ---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 260 ---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
..+.++|||||||++|+|++|+.||......+ ...+..... .+
T Consensus 246 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~----~~~~~~~~~-~~----------------------------- 291 (353)
T PLN00034 246 HGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD----WASLMCAIC-MS----------------------------- 291 (353)
T ss_pred cCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc----HHHHHHHHh-cc-----------------------------
Confidence 23568999999999999999999997322111 000000000 00
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....+...+..+.+||.+||..||++|||+.|+++||||.+..
T Consensus 292 ----------~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 292 ----------QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred ----------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 00112234567889999999999999999999999999998863
No 115
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.1e-39 Score=298.62 Aligned_cols=278 Identities=30% Similarity=0.500 Sum_probs=214.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.|++|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~ 66 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC--------------QHPYVVKLLD 66 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC--------------CCCCCcceee
Confidence 5899999999999999999999999999999987532 2345678899999988 7899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .+...++|||+++++|.+.+.... ..+++..++.++.|++.||+|||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~~~~~~---- 136 (286)
T cd07832 67 VFP----HGSGFVLVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN-GIMHRDLKPANLLISADG---- 136 (286)
T ss_pred EEe----cCCeeEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCHHHEEEcCCC----
Confidence 887 577899999999999988876543 4589999999999999999999998 999999999999998765
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCC-
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~- 260 (393)
.++|+|||.+...... .....++..|+|||.+.+..
T Consensus 137 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 177 (286)
T cd07832 137 ---------------------------------------VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARK 177 (286)
T ss_pred ---------------------------------------cEEEeeeeecccccCCCCCccccccCcccccCceeeecccc
Confidence 4999999988765432 23456788999999987654
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++||||+|+++|+|++|.+||.+.. ....+..+....+......+......... ............
T Consensus 178 ~~~~~Di~slG~~l~~l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 246 (286)
T cd07832 178 YDPGVDLWAVGCIFAELLNGSPLFPGEN------DIEQLAIVFRTLGTPNEETWPGLTSLPDY-----NKITFPESKPIP 246 (286)
T ss_pred CCchhHHHHHHHHHHHHHcCCcCcCCCC------HHHHHHHHHHHcCCCChHHHhhccCcchh-----hcccCCCCCcch
Confidence 5899999999999999999988887654 44556666666665544433322111110 000000000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
+.. ...+.+..+.++|.+||..||++|||++++++||||.
T Consensus 247 ----~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 247 ----LEE---IFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ----HHH---hCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 111 1123457889999999999999999999999999984
No 116
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.7e-39 Score=297.90 Aligned_cols=281 Identities=28% Similarity=0.462 Sum_probs=211.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.+..... ....+.+|+.+++.+ .|+|++++.+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 70 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL--------------KHANIVTLHD 70 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC--------------CCcceeeEEE
Confidence 589999999999999999999999999999998864322 234456899999999 8899999998
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .+...++||||++++|.+.+.... ..++...++.++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~dl~p~nil~~~~~---- 140 (291)
T cd07844 71 IIH----TKKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLLISERG---- 140 (291)
T ss_pred EEe----cCCeEEEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCHHHEEEcCCC----
Confidence 876 667899999999889988876543 3588999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc-CCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG-AGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~-~~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+ ..+
T Consensus 141 ---------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 181 (291)
T cd07844 141 ---------------------------------------ELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEY 181 (291)
T ss_pred ---------------------------------------CEEECccccccccCCCCccccccccccccCCcHHhhcCccc
Confidence 4999999988654321 122346788999999876 457
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++||||+|+++|+|++|+.||..... ..+.+..+.+..+......+........+....... .....
T Consensus 182 ~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 250 (291)
T cd07844 182 STSLDMWGVGCIFYEMATGRPLFPGSTD-----VEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPF-----YPPRP- 250 (291)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCcc-----HHHHHHHHHHhcCCCChhhhhhhhhccccccccccc-----cCChh-
Confidence 8999999999999999999999965431 345566666666665544433322211111110000 00000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... .......+.+++.+||+.||.+|||+.++++||||
T Consensus 251 ---~~~~~~-~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 251 ---LINHAP-RLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ---HHHhCc-CCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000000 00112577899999999999999999999999998
No 117
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1e-39 Score=307.74 Aligned_cols=287 Identities=25% Similarity=0.454 Sum_probs=221.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+++|++.+.||+|++|.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~ 69 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF--------------KHDNIIAI 69 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhc--------------CCCCccCH
Confidence 468999999999999999999999999999999887532 2345567899999998 78999999
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+.+..........++||||+++++...+... ..+++..+..++.|++.||+|||++ +++|+||||+||+++.++
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~-- 144 (334)
T cd07855 70 RDILRPPGADFKDVYVVMDLMESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLVNEDC-- 144 (334)
T ss_pred HHhccccCCCCceEEEEEehhhhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCC--
Confidence 98887554456689999999988888887654 3489999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHH
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVL 256 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~ 256 (393)
.++|+|||.+...... .....++..|+|||.+
T Consensus 145 -----------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~ 183 (334)
T cd07855 145 -----------------------------------------ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELL 183 (334)
T ss_pred -----------------------------------------cEEecccccceeecccCcCCCcccccccccccccChHHh
Confidence 4999999988654321 1234678899999998
Q ss_pred hc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc-ccccCCCCCeeecc
Q psy12288 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT-LRYFTPQGNFRRID 334 (393)
Q Consensus 257 ~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~ 334 (393)
.+ ..++.++|+||||+++|+|++|+.||.+.+ ....+..+....|..|.......... ...... ......
T Consensus 184 ~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~ 255 (334)
T cd07855 184 LSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN------YVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQ--NLPRKQ 255 (334)
T ss_pred cCCcccccccchHHHHHHHHHHHcCCCccCCCC------hHHHHHHHHHHhCCChhHhhhhhchhhHHHHHh--hcccCC
Confidence 76 357899999999999999999999997655 45667777788887777665432211 000000 000000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
. .++ ..+....+..+.++|++||..||.+|||+++++.||||.....
T Consensus 256 ~-~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 256 P-VPW---------SKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred C-CCH---------HHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence 0 000 0011234678999999999999999999999999999987653
No 118
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.4e-39 Score=298.44 Aligned_cols=279 Identities=30% Similarity=0.461 Sum_probs=211.6
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc------chhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY------ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+|++.+.||+|++|.||+|.+..+++.|++|.+...... ...+..|+.+++.+ .|+|+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~ 66 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL--------------KHPNIIG 66 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc--------------CCCCChh
Confidence 589999999999999999999999999999998754322 23456788888888 7999999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++.+. .....++||||++++|.+.+.... ..+++..+..++.||++||+|||++ |++|+||+|+||+++.++
T Consensus 67 ~~~~~~----~~~~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nill~~~~- 139 (298)
T cd07841 67 LLDVFG----HKSNINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN-WILHRDLKPNNLLIASDG- 139 (298)
T ss_pred hhheee----cCCEEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCChhhEEEcCCC-
Confidence 999887 567899999999888888886643 3589999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~- 258 (393)
.++|+|||++...... .....++..|+|||.+.+
T Consensus 140 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 177 (298)
T cd07841 140 ------------------------------------------VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGA 177 (298)
T ss_pred ------------------------------------------CEEEccceeeeeccCCCccccccccceeeeCHHHHhCC
Confidence 4999999998765432 223356788999999865
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|+|||||++|+|++|.+||...+ ..+.+..+....+......+............ .....
T Consensus 178 ~~~~~~~Dv~slG~il~e~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 244 (298)
T cd07841 178 RHYGVGVDMWSVGCIFAELLLRVPFLPGDS------DIDQLGKIFEALGTPTEENWPGVTSLPDYVEF-------KPFPP 244 (298)
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCccccCCc------cHHHHHHHHHHcCCCchhhhhhcccccccccc-------cccCC
Confidence 357899999999999999999988887554 33445555555554433333221111100000 00000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
... .......+..+.++|.+||..||.+|||+.|+++||||++.-
T Consensus 245 ~~~-------~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 245 TPL-------KQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred cch-------hhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 000 001123467888999999999999999999999999999853
No 119
>KOG1989|consensus
Probab=100.00 E-value=7.8e-40 Score=320.90 Aligned_cols=247 Identities=24% Similarity=0.366 Sum_probs=203.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEe-cccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK-SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.+++|.++|.+|||+.||+|++...+..||+|++- .+......+.+|+++|+.|+ +|+|||.+++.
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~-------------gh~nIV~yids 103 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS-------------GHKNIVSYIDS 103 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc-------------CCCceeeEecc
Confidence 59999999999999999999999888999999764 45555677899999999994 79999999995
Q ss_pred ceeec--CC-CeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCceEEeec
Q psy12288 107 FKIYS--RN-GTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENILMCVD 180 (393)
Q Consensus 107 ~~~~~--~~-~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NIl~~~~ 180 (393)
..... .+ .-.+.|.|||| +++|.+++..+...+|++.++++|+.|++.|+++||.. . |+|||||.+|||++.+
T Consensus 104 s~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~ 182 (738)
T KOG1989|consen 104 SAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSAD 182 (738)
T ss_pred ccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCC
Confidence 44332 22 24688999999 58999999877767799999999999999999999975 7 9999999999999888
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------------CCCCCCCC
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------------FADEIQTR 248 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------------~~~~~~t~ 248 (393)
+ ..||||||.+...... ......|+
T Consensus 183 g-------------------------------------------~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp 219 (738)
T KOG1989|consen 183 G-------------------------------------------NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTP 219 (738)
T ss_pred C-------------------------------------------CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCc
Confidence 7 4999999988643211 12235699
Q ss_pred CCchhHHHh---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 249 QYRSVEVLI---GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 249 ~y~aPE~~~---~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
.|++||.+. +.+.+.++|||+|||+||.|+....||.....-
T Consensus 220 ~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----------------------------------- 264 (738)
T KOG1989|consen 220 QYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----------------------------------- 264 (738)
T ss_pred cccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-----------------------------------
Confidence 999999975 567899999999999999999999999643211
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.|+..++.+| ..++..+.+||+.||..||.+||++-|++.+
T Consensus 265 -----------------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 265 -----------------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred -----------------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 2223333344 3688999999999999999999999988764
No 120
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.6e-40 Score=310.26 Aligned_cols=244 Identities=22% Similarity=0.311 Sum_probs=191.7
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHH-HHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIV-LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+.||+|+||.||+|.+..+++.||+|++..... ....+..|.. +++.+ .|+|++++++.+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l--------------~hp~iv~~~~~~~ 66 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV--------------KHPFLVGLHYSFQ 66 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC--------------CCCCCCCeeEEEE
Confidence 368999999999999999999999999875321 1122333433 34455 7999999988886
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.....++||||+ +++|...+... ..+++..+..++.||+.||+|||++ |++||||||+|||++.++
T Consensus 67 ----~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-givH~dikp~NIll~~~~------ 133 (323)
T cd05575 67 ----TADKLYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSL-NIIYRDLKPENILLDSQG------ 133 (323)
T ss_pred ----eCCEEEEEEcCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCC------
Confidence 567899999999 77888877654 3488999999999999999999998 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||+.|+|||++.+..++.+
T Consensus 134 -------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 176 (323)
T cd05575 134 -------------------------------------HVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRT 176 (323)
T ss_pred -------------------------------------cEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCcc
Confidence 49999999886432 12234468999999999999889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|+|++|..||...+. ......+..
T Consensus 177 ~DvwslG~il~ell~g~~pf~~~~~------~~~~~~i~~---------------------------------------- 210 (323)
T cd05575 177 VDWWCLGAVLYEMLYGLPPFYSRDT------AEMYDNILN---------------------------------------- 210 (323)
T ss_pred ccccccchhhhhhhcCCCCCCCCCH------HHHHHHHHc----------------------------------------
Confidence 9999999999999999999975431 111111110
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWLNPR 389 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~~~~ 389 (393)
....++...+..+.++|++||..||.+||++ .++++||||++.
T Consensus 211 --~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 211 --KPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred --CCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 1111223446778899999999999999987 699999999874
No 121
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.9e-39 Score=297.87 Aligned_cols=255 Identities=24% Similarity=0.340 Sum_probs=201.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|++.+.||+|+||.||+|.+..+++.+|+|.+..... ....+.+|+.+++.+ .|++++++.
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~~~~i~~~~ 66 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV--------------NSQFVVNLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc--------------CCcCceeEE
Confidence 37888999999999999999999999999998865321 123457799999998 788888888
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .++..+++|||+ ++++...+.......+++..+..++.|++.||.|||+. |++||||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~iiH~dikp~Nili~~~~-- 139 (285)
T cd05632 67 YAYE----TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-NTVYRDLKPENILLDDYG-- 139 (285)
T ss_pred EEEe----cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEECCCC--
Confidence 7776 567899999999 67777776554434589999999999999999999998 999999999999997665
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++..... ......++..|+|||.+.+..+
T Consensus 140 -----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~ 178 (285)
T cd05632 140 -----------------------------------------HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRY 178 (285)
T ss_pred -----------------------------------------CEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCC
Confidence 499999998865432 2234568999999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||..... ......+.....
T Consensus 179 ~~~~Di~slG~~l~~l~~g~~P~~~~~~------~~~~~~~~~~~~---------------------------------- 218 (285)
T cd05632 179 TLSPDYWGLGCLIYEMIEGQSPFRGRKE------KVKREEVDRRVL---------------------------------- 218 (285)
T ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHhhh----------------------------------
Confidence 9999999999999999999999975431 111111111000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
.....++...+..+.+|+.+||..||++||+ +.++++||||+..
T Consensus 219 ----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 219 ----ETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred ----ccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 0001122344567789999999999999999 8999999999875
No 122
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.7e-39 Score=298.40 Aligned_cols=283 Identities=27% Similarity=0.401 Sum_probs=214.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|+++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM--------------QHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc--------------cCCCEeeEE
Confidence 47999999999999999999999999999999876432 2235677899999998 889999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+.+.++||||+++++.+.+.......++...+..++.||+.||+|||++ +++|+||+|+||+++.++.
T Consensus 68 ~~~~----~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dl~p~nill~~~~~-- 140 (294)
T PLN00009 68 DVVH----SEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTN-- 140 (294)
T ss_pred EEEe----cCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCcceEEEECCCC--
Confidence 9887 66789999999988998888765544467888889999999999999998 9999999999999975432
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-C
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~ 260 (393)
.++++|||++...... .....+++.|+|||.+.+. .
T Consensus 141 ----------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 180 (294)
T PLN00009 141 ----------------------------------------ALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 180 (294)
T ss_pred ----------------------------------------EEEEcccccccccCCCccccccCceeecccCHHHHhCCCC
Confidence 4899999998754322 2234567899999998764 4
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|..||.... ..+.+..+....+..+...+........+... .......
T Consensus 181 ~~~~~Dv~slG~i~~~l~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 247 (294)
T PLN00009 181 YSTPVDIWSVGCIFAEMVNQKPLFPGDS------EIDELFKIFRILGTPNEETWPGVTSLPDYKSA-------FPKWPPK 247 (294)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhccccccchhhhhh-------cccCCCC
Confidence 7899999999999999999999997654 34455555565555444333211111000000 0000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
. . .......+..+.+++.+||+.||++||++.++++||||++..
T Consensus 248 ~---~---~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 248 D---L---ATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred C---H---HHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 0 0 001123466788999999999999999999999999998764
No 123
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.3e-39 Score=305.63 Aligned_cols=287 Identities=25% Similarity=0.384 Sum_probs=213.9
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++++|++.++||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+ .|+|++++
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~ 68 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF--------------KHENIIGI 68 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhC--------------CCCCcCch
Confidence 456999999999999999999999999999999988632 22335567799999998 78889898
Q ss_pred cccceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+..... .....++++|++++++...+... .+++..+..++.|++.||++||++ |++||||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~-~ivH~dlkp~Nill~~~~- 143 (336)
T cd07849 69 LDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTNC- 143 (336)
T ss_pred hheeecccccccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCC-
Confidence 887653221 33468999999988888877543 489999999999999999999998 999999999999997766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHH
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVL 256 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~ 256 (393)
.++|+|||++...... .....+|..|+|||.+
T Consensus 144 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 181 (336)
T cd07849 144 ------------------------------------------DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIM 181 (336)
T ss_pred ------------------------------------------CEEECcccceeeccccccccCCcCCcCcCCCccChHHh
Confidence 4999999988754321 1234678899999997
Q ss_pred hc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+ ..++.++|+|||||++|+|++|+.||.... .......+....+..+.+........... +.....+.
T Consensus 182 ~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 251 (336)
T cd07849 182 LNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD------YLHQLNLILGVLGTPSQEDLNCIISLRAR----NYIKSLPF 251 (336)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCCHHHHHHhhchhhh----hHHhhcCc
Confidence 65 457899999999999999999999997544 44556666666666555443321110000 00000000
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..... ........+..+.++|.+||+.||++|||+.|+++||||+...
T Consensus 252 ~~~~~-------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 252 KPKVP-------WNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred CCccc-------HHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 00000 0000123467789999999999999999999999999998765
No 124
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.2e-39 Score=319.37 Aligned_cols=259 Identities=22% Similarity=0.278 Sum_probs=203.4
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
...+|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+|+.++..+ .|+++++
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~--------------~h~~iv~ 95 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC--------------DFFSIVK 95 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC--------------CCCcEEE
Confidence 35799999999999999999999999999999999865422 234456788888777 7888888
Q ss_pred ccccceeecC----CCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 103 LLNDFKIYSR----NGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 103 ~~~~~~~~~~----~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
+...+..... ....+++||||+ +++|.+.+... ....+++..+..++.|++.||.|||++ +++||||||+||
T Consensus 96 ~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~-~IiHrDLKP~NI 174 (496)
T PTZ00283 96 CHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK-HMIHRDIKSANI 174 (496)
T ss_pred eecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHE
Confidence 8776653322 122578999999 78998887543 224588999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQY 250 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y 250 (393)
+++.++ .++|+|||+++..... .....||+.|
T Consensus 175 Ll~~~~-------------------------------------------~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y 211 (496)
T PTZ00283 175 LLCSNG-------------------------------------------LVKLGDFGFSKMYAATVSDDVGRTFCGTPYY 211 (496)
T ss_pred EEeCCC-------------------------------------------CEEEEecccCeeccccccccccccccCCcce
Confidence 998766 4999999998755322 2345689999
Q ss_pred chhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 251 RSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 251 ~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
+|||++.+..++.++|||||||++|+|++|+.||...+ ....+..+.. +.
T Consensus 212 ~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~------~~~~~~~~~~--~~---------------------- 261 (496)
T PTZ00283 212 VAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN------MEEVMHKTLA--GR---------------------- 261 (496)
T ss_pred eCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHhc--CC----------------------
Confidence 99999999889999999999999999999999996543 1111111110 10
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..+++...+..+.+++.+||..||.+||++.++++|||++..
T Consensus 262 -----------------~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 262 -----------------YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred -----------------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 001234456788999999999999999999999999998753
No 125
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.3e-38 Score=293.21 Aligned_cols=279 Identities=28% Similarity=0.456 Sum_probs=206.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|+++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~~ 66 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL--------------KHPNLVNLI 66 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC--------------CCCCEeeee
Confidence 47999999999999999999999999999999886432 2234567899999998 789999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+...++||||+.+++++.+.... ..+++..+..++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 67 ~~~~----~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~-~i~H~dl~p~nil~~~~~--- 137 (286)
T cd07847 67 EVFR----RKRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKH-NCIHRDVKPENILITKQG--- 137 (286)
T ss_pred eEEe----eCCEEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCChhhEEEcCCC---
Confidence 9887 566799999999776666665433 3589999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhc-CC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIG-AG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~-~~ 260 (393)
.++|+|||++....... ....++..|+|||.+.+ ..
T Consensus 138 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 177 (286)
T cd07847 138 ----------------------------------------QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQ 177 (286)
T ss_pred ----------------------------------------cEEECccccceecCCCcccccCcccccccCCHHHHhCCCC
Confidence 49999999987654322 23457889999999876 44
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|++||.+.+ ..+.+..+....+......... +.............+..
T Consensus 178 ~~~~~Di~slG~i~~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 244 (286)
T cd07847 178 YGPPVDVWAIGCVFAELLTGQPLWPGKS------DVDQLYLIRKTLGDLIPRHQQI-------FSTNQFFKGLSIPEPET 244 (286)
T ss_pred cCchhhhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChHHhhh-------cccccccccccCCCccc
Confidence 7889999999999999999999997655 3344444444444432211110 00000000000000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
... ... .....+..+.+|+.+||..||++|||+.|++.||||
T Consensus 245 ~~~-~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 245 REP-LES---KFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccC-HHH---HhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 000 000 012346788899999999999999999999999998
No 126
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.1e-39 Score=297.55 Aligned_cols=249 Identities=22% Similarity=0.311 Sum_probs=194.2
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||+++...+++.+|+|.+..+.. .......|+.+++.+ .|+|++++.+.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l--------------~hp~i~~~~~~~~--- 63 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV--------------NSPFIVNLAYAFE--- 63 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc--------------CCCcEEEEEEEEe---
Confidence 6999999999999999999999998864321 123345688999988 8899999988886
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.+.+.++||||+ +++|...+.......++...+..++.|++.||+|||+. |++||||||+||+++.++
T Consensus 64 -~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~--------- 132 (277)
T cd05607 64 -SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKPENVLLDDQG--------- 132 (277)
T ss_pred -cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEEEccCChHhEEEcCCC---------
Confidence 677899999999 77887777655445588899999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||++...... .....++..|+|||++.+..++.++|+|
T Consensus 133 ----------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 178 (277)
T cd05607 133 ----------------------------------NCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWF 178 (277)
T ss_pred ----------------------------------CEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHH
Confidence 4899999988765432 2234678999999999988899999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhh
Q psy12288 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348 (393)
Q Consensus 269 SlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (393)
||||++|+|++|+.||........ ......... .+.++
T Consensus 179 slGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~--~~~~~-------------------------------------- 216 (277)
T cd05607 179 AMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTL--EDEVK-------------------------------------- 216 (277)
T ss_pred HHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhh--ccccc--------------------------------------
Confidence 999999999999999965432110 000000000 00000
Q ss_pred ccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCCCCC
Q psy12288 349 YHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWLNPR 389 (393)
Q Consensus 349 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~~~~ 389 (393)
......+..+.++|.+||..||++||++ ++++.||||+.+
T Consensus 217 -~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 217 -FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred -cccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 0012345678899999999999999999 778899999875
No 127
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-39 Score=329.62 Aligned_cols=281 Identities=22% Similarity=0.364 Sum_probs=209.3
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
..|+.+.++|+++++||+|+||.||+|.+..++..||+|.+.... .....+..|+.+++.+ .|
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L--------------~H 71 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL--------------KH 71 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc--------------CC
Confidence 346677789999999999999999999999999999999887432 2345678899999999 89
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcC------Ceeec
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQC------RIIHT 168 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~------~i~H~ 168 (393)
+||+++++.|... ....+++||||+ +++|.+++... ....+++..++.|+.||+.||+|||... +|+|+
T Consensus 72 PNIVrl~d~f~de--~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHR 149 (1021)
T PTZ00266 72 KNIVRYIDRFLNK--ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHR 149 (1021)
T ss_pred CCcCeEEEEEEec--CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceec
Confidence 9999999887532 456799999999 77888887642 1245899999999999999999999841 49999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQ 246 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~ 246 (393)
||||+|||++.+......+ .....+......++|+|||++...... .....+
T Consensus 150 DLKPeNILL~s~~~~lg~i--------------------------~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vG 203 (1021)
T PTZ00266 150 DLKPQNIFLSTGIRHIGKI--------------------------TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVG 203 (1021)
T ss_pred cCcHHHeEeecCccccccc--------------------------cccccccCCCCceEEccCCccccccccccccccCC
Confidence 9999999997543100000 000000111235899999998765422 234468
Q ss_pred CCCCchhHHHhcC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 247 TRQYRSVEVLIGA--GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 247 t~~y~aPE~~~~~--~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
|+.|+|||++.+. .++.++|||||||++|+|++|..||.... ....+.........+|
T Consensus 204 Tp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~------~~~qli~~lk~~p~lp-------------- 263 (1021)
T PTZ00266 204 TPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN------NFSQLISELKRGPDLP-------------- 263 (1021)
T ss_pred CccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC------cHHHHHHHHhcCCCCC--------------
Confidence 9999999999653 47899999999999999999999996443 1111111111000000
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+..+.+||.+||..+|.+||++.|+|.||||+...
T Consensus 264 ---------------------------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 264 ---------------------------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred ---------------------------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 023456788999999999999999999999999998664
No 128
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=6.1e-39 Score=295.35 Aligned_cols=277 Identities=29% Similarity=0.491 Sum_probs=211.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||.|++|.||+|.+..+++.||||.+..+. .....+.+|+.+++.+ .|+|++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 66 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--------------NHPNIVKLLD 66 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc--------------CCCCCcchhh
Confidence 4899999999999999999999999999999886432 1234678899999999 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. ++...++||||+.+++...+.......+++..+..++.|++.||+|||+. +++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~H~~l~p~nill~~~~---- 137 (284)
T cd07860 67 VIH----TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG---- 137 (284)
T ss_pred hcc----cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC----
Confidence 886 66789999999988888888765556689999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC-C
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG-Y 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~-~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+.. +
T Consensus 138 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 178 (284)
T cd07860 138 ---------------------------------------AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 178 (284)
T ss_pred ---------------------------------------CEEEeeccchhhcccCccccccccccccccCCeEEecCCCC
Confidence 4999999988755432 22345678899999887654 5
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|+.||...+ ....+..+....+..+...+........... . ...+.
T Consensus 179 ~~~~Dv~slG~il~~l~tg~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~- 242 (284)
T cd07860 179 STAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP------S---FPKWA- 242 (284)
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHHhCCCChhhhhhhhHHHHHHh------h---ccccc-
Confidence 889999999999999999999997654 4455556666666554433221110000000 0 00000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... .....+..+.++|.+||..||.+|||++++++||||
T Consensus 243 ~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 243 RQDFSK---VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred ccCHHH---HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000000 112345677899999999999999999999999998
No 129
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=9e-39 Score=295.84 Aligned_cols=283 Identities=28% Similarity=0.438 Sum_probs=208.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+. .|+|+++++
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~-------------~~~~i~~~~ 67 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS-------------ESIYIVRLL 67 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc-------------CCCCcccee
Confidence 47999999999999999999999999999999876432 22356778999999983 468899999
Q ss_pred ccceeecC-CCeEEEEEEeeccccHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee-
Q psy12288 105 NDFKIYSR-NGTHICMVFEVMGYNLLRLIARSD---YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV- 179 (393)
Q Consensus 105 ~~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~---~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~- 179 (393)
+.+..... .....+++|||+.+++.+++.... ...+++..++.++.||+.||.|||++ |++|+||+|+||+++.
T Consensus 68 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~~~nil~~~~ 146 (295)
T cd07837 68 DVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLLVDKQ 146 (295)
T ss_pred eeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEecC
Confidence 88875443 233589999999888888876532 23578999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~ 256 (393)
++ .++|+|||.+...... .....+++.|+|||.+
T Consensus 147 ~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~ 183 (295)
T cd07837 147 KG-------------------------------------------LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVL 183 (295)
T ss_pred CC-------------------------------------------eEEEeecccceecCCCccccCCcccccCCCChHHh
Confidence 33 5999999988754322 2233567889999998
Q ss_pred hcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+. .++.++|+||||+++|+|++|..||.+.+ ....+..+....+..+...+........... .
T Consensus 184 ~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-- 248 (295)
T cd07837 184 LGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDS------ELQQLLHIFKLLGTPTEQVWPGVSKLRDWHE-------F-- 248 (295)
T ss_pred hCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHHHhCCCChhhCcchhhccchhh-------c--
Confidence 764 46899999999999999999999997654 3444445555444433322211111000000 0
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
..+. ..... ......+..+.+||.+||..||.+||++.|++.||||+
T Consensus 249 -~~~~-~~~~~---~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 249 -PQWK-PQDLS---RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred -Cccc-chhHH---HhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 0000 00000 01123567788999999999999999999999999995
No 130
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.7e-39 Score=300.25 Aligned_cols=254 Identities=25% Similarity=0.362 Sum_probs=203.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|++|.||+|.+..+++.+|+|.+..... ....+..|+.+++.+ .|++++++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~ 66 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL--------------DHPFLPTL 66 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC--------------CCCCchhh
Confidence 479999999999999999999999999999998875432 234567889999988 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+...++|||++ +++|.+.+.......+++..+..++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~- 140 (316)
T cd05574 67 YASFQ----TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLHESG- 140 (316)
T ss_pred eeeee----cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChHHeEEcCCC-
Confidence 88876 667899999999 77888887765445689999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------------- 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------------- 240 (393)
.++|+|||++......
T Consensus 141 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (316)
T cd05574 141 ------------------------------------------HIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPS 178 (316)
T ss_pred ------------------------------------------CEEEeecchhhcccccccccccccccccccccccccch
Confidence 4899999987543211
Q ss_pred ----------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCC
Q psy12288 241 ----------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP 310 (393)
Q Consensus 241 ----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p 310 (393)
.....||..|+|||++.+..++.++||||||+++|+|++|+.||...+. ...+..+.......
T Consensus 179 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~- 251 (316)
T cd05574 179 ETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR------DETFSNILKKEVTF- 251 (316)
T ss_pred hhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch------HHHHHHHhcCCccC-
Confidence 1123578889999999988899999999999999999999999975442 11111111100000
Q ss_pred hHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC----HHHHhcCCCC
Q psy12288 311 KEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS----AADCLRHPWL 386 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~ 386 (393)
......+..+.++|.+||..||++||| ++|+++||||
T Consensus 252 ---------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~ 292 (316)
T cd05574 252 ---------------------------------------PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292 (316)
T ss_pred ---------------------------------------CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchh
Confidence 001124678899999999999999999 9999999999
Q ss_pred CCC
Q psy12288 387 NPR 389 (393)
Q Consensus 387 ~~~ 389 (393)
++.
T Consensus 293 ~~~ 295 (316)
T cd05574 293 RGV 295 (316)
T ss_pred hcC
Confidence 875
No 131
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.7e-40 Score=308.58 Aligned_cols=244 Identities=23% Similarity=0.366 Sum_probs=196.7
Q ss_pred EEecccCceEEEEEEeC---CCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 34 RKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
+.||+|+||.||++++. .+++.||+|++.... ........|+.+++.+ .|+||+++++.+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~~~~~ 67 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV--------------NHPFIVKLHYAF 67 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC--------------CCCCcccEEEEE
Confidence 67999999999999764 568899999987532 1234456788899888 899999999888
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+...++||||+ +++|.+.+... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++
T Consensus 68 ~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~----- 135 (318)
T cd05582 68 Q----TEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEG----- 135 (318)
T ss_pred E----cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHeEECCCC-----
Confidence 7 567899999999 78888887654 3489999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....||+.|+|||.+.+..++.
T Consensus 136 --------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~ 177 (318)
T cd05582 136 --------------------------------------HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 177 (318)
T ss_pred --------------------------------------cEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCC
Confidence 4999999998754322 23446899999999999888899
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|||||||++|+|++|+.||...+ .......+..
T Consensus 178 ~~DiwslG~il~el~tg~~p~~~~~------~~~~~~~i~~--------------------------------------- 212 (318)
T cd05582 178 SADWWSFGVLMFEMLTGSLPFQGKD------RKETMTMILK--------------------------------------- 212 (318)
T ss_pred ccceeccceEeeeeccCCCCCCCCC------HHHHHHHHHc---------------------------------------
Confidence 9999999999999999999997543 1222222111
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....++...+..+.++|++||+.||++||+ +.+++.||||...
T Consensus 213 ---~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 213 ---AKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred ---CCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 111223345677889999999999999999 7789999999864
No 132
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=6.3e-39 Score=298.82 Aligned_cols=283 Identities=27% Similarity=0.447 Sum_probs=211.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.++||+|+||.||+|.+..+++.||+|.+.... .......+|+.+++.+ .|++++++++
T Consensus 13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~ 78 (310)
T cd07865 13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL--------------KHENVVNLIE 78 (310)
T ss_pred heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC--------------CCCCccceEE
Confidence 7999999999999999999999999999999876432 1223456799999998 7888888888
Q ss_pred cceeec----CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 106 DFKIYS----RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 106 ~~~~~~----~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
.+.... ......++||||+++++.+.+.... ..+++.++..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~ 156 (310)
T cd07865 79 ICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANILITKDG 156 (310)
T ss_pred EEecccccccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEECCCC
Confidence 765332 1245679999999888888876543 3589999999999999999999998 999999999999997766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-------CCCCCCCCCchhH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-------ADEIQTRQYRSVE 254 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-------~~~~~t~~y~aPE 254 (393)
.++|+|||++....... ....++..|+|||
T Consensus 157 -------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 193 (310)
T cd07865 157 -------------------------------------------ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPE 193 (310)
T ss_pred -------------------------------------------cEEECcCCCcccccCCcccCCCCccCcccCccccCcH
Confidence 49999999987553221 2235678899999
Q ss_pred HHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+.+.. ++.++|+||||+++|+|++|..||...+ ....+..+....|.+|.......... ..+... ..
T Consensus 194 ~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~ 262 (310)
T cd07865 194 LLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT------EQHQLTLISQLCGSITPEVWPGVDKL-ELFKKM----EL 262 (310)
T ss_pred HhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhcccccch-hhhhhc----cC
Confidence 987654 6889999999999999999999997655 45566677777787777654433211 111000 00
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..... ....... .+...+..+.++|.+||..||.+|||++|+++||||
T Consensus 263 ~~~~~----~~~~~~l-~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 263 PQGQK----RKVKERL-KPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred CCccc----hhhHHhc-ccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 00000 0000000 001134567899999999999999999999999998
No 133
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.1e-38 Score=298.23 Aligned_cols=297 Identities=28% Similarity=0.413 Sum_probs=213.8
Q ss_pred eEEEEEEecccCceEEEEEEeCC--CCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+|++.++||+|++|.||+|.+.. ++..||+|.+.... ...+...+|+.+++.+ .|+|+++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 66 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL--------------KHENVVS 66 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc--------------CCCCccc
Confidence 58999999999999999999988 78999999987532 2345667899999998 8899999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSD---YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~---~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+.+.+.. ..+..+++|||++++++...+.... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.
T Consensus 67 ~~~~~~~--~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~h~dlkp~Nil~~~ 143 (316)
T cd07842 67 LVEVFLE--HADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN-WVLHRDLKPANILVMG 143 (316)
T ss_pred eEEEEeC--CCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEEcC
Confidence 9998872 2336899999999888887764322 22578999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSV 253 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aP 253 (393)
++. ....++|+|||++....... ....++..|+||
T Consensus 144 ~~~---------------------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 184 (316)
T cd07842 144 EGP---------------------------------------ERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAP 184 (316)
T ss_pred CCC---------------------------------------ccceEEECCCccccccCCCcccccccCCccccccccCH
Confidence 321 01259999999887653321 223568889999
Q ss_pred HHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC---CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 254 EVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKE---YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 254 E~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|.+.+. .++.++|+||||+++++|++|+.||....... .......+..+...++..+...+........+......
T Consensus 185 E~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 264 (316)
T cd07842 185 ELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKD 264 (316)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhh
Confidence 998774 47899999999999999999999997655432 11123455566666665544433322222111110000
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
... . ..+. .......+.....+..+.+++.+||..||++|||+.|+++||||
T Consensus 265 ~~~-~-~~~~---~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 265 FKT-K-TYPS---NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred ccC-C-CCCC---ccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000 0 0000 00111111112456788999999999999999999999999998
No 134
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=9.8e-40 Score=306.94 Aligned_cols=288 Identities=20% Similarity=0.270 Sum_probs=199.2
Q ss_pred EEEEeccc--CceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 32 VIRKLGWG--HFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 32 ~~~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+.++||+| +|+.||++.+..+++.||+|.+.... .....+.+|+.+++.+ .|+||+++++.
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~hpniv~~~~~ 67 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF--------------NHPNIVPYRAT 67 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc--------------CCCCeeeEEEE
Confidence 56789999 67899999999999999999987532 2234567899999998 89999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .++..++||||+ ++++.+++.......+++..++.++.|++.||+|||++ +++||||||+||+++.++
T Consensus 68 ~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiH~dlkp~Nil~~~~~---- 138 (327)
T cd08227 68 FI----ADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDG---- 138 (327)
T ss_pred EE----ECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCChhhEEEecCC----
Confidence 87 566799999999 67888887654444588999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----------CCCCCCCCCCCchhHH
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----------HFADEIQTRQYRSVEV 255 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----------~~~~~~~t~~y~aPE~ 255 (393)
.++++||+.+..... ......++..|+|||+
T Consensus 139 ---------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 179 (327)
T cd08227 139 ---------------------------------------KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEV 179 (327)
T ss_pred ---------------------------------------cEEEcccchhhccccccccccccccccccccceecccChHH
Confidence 377888875432211 1112345778999999
Q ss_pred Hhc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc-------CcccccccCC
Q psy12288 256 LIG--AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ-------GKKTLRYFTP 326 (393)
Q Consensus 256 ~~~--~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~-------~~~~~~~~~~ 326 (393)
+.+ ..++.++|||||||++|+|++|+.||...... .. ......+..|...... .....+....
T Consensus 180 ~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (327)
T cd08227 180 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT------QM--LLEKLNGTVPCLLDTTTIPAEELTMKPSRSGAN 251 (327)
T ss_pred hhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh------HH--HHHHhcCCccccccccchhhhhcccCCcccCCc
Confidence 986 35889999999999999999999999754321 11 1111222222110000 0000000000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.+ ....................+.....+..+.+||++||..||++|||++|+++||||+.++
T Consensus 252 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 252 SG-LGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred CC-CCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00 0000000000000000011112334567899999999999999999999999999998865
No 135
>KOG4279|consensus
Probab=100.00 E-value=2.8e-40 Score=313.59 Aligned_cols=259 Identities=27% Similarity=0.426 Sum_probs=210.9
Q ss_pred CeeCCeEEE-----EEEecccCceEEEEEEeCCCCceEEEEEEe-cccccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 24 DLFNFRYHV-----IRKLGWGHFSTVWLSWDLQDKTFVALKIVK-SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 24 ~~~~~~y~~-----~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
+.+..+|+. .-+||+|+||.||.|++..|+..+|||-+. +.....+-++.|+.+.+.+ .|
T Consensus 566 e~iefeYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L--------------rH 631 (1226)
T KOG4279|consen 566 EKIEFEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTL--------------RH 631 (1226)
T ss_pred cceEEEeeecCCCceEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHH--------------hh
Confidence 345555553 348999999999999999999999999775 4455567789999999999 88
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGI--HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l--~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
.||++.++++. .++++-|.||.. ||+|.+++ +..|+++ ++.++..+..||++||.|||++ .|||||||-+|
T Consensus 632 kNIVrYLGs~s----enGf~kIFMEqVPGGSLSsLL-rskWGPlKDNEstm~fYtkQILeGLkYLHen-~IVHRDIKGDN 705 (1226)
T KOG4279|consen 632 KNIVRYLGSVS----ENGFFKIFMEQVPGGSLSSLL-RSKWGPLKDNESTMNFYTKQILEGLKYLHEN-KIVHRDIKGDN 705 (1226)
T ss_pred HhHHHHhhccC----CCCeEEEEeecCCCCcHHHHH-HhccCCCccchhHHHHHHHHHHHHhhhhhhc-ceeeccccCCc
Confidence 99999999986 777899999998 66666655 5567778 8889999999999999999999 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCc
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYR 251 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~ 251 (393)
+|++.-+ +.+|++|||.++++. .-..+..||..||
T Consensus 706 VLvNTyS------------------------------------------GvlKISDFGTsKRLAginP~TETFTGTLQYM 743 (1226)
T KOG4279|consen 706 VLVNTYS------------------------------------------GVLKISDFGTSKRLAGINPCTETFTGTLQYM 743 (1226)
T ss_pred EEEeecc------------------------------------------ceEEecccccchhhccCCccccccccchhhh
Confidence 9996443 369999999988763 2345678999999
Q ss_pred hhHHHhcC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 252 SVEVLIGA--GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 252 aPE~~~~~--~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|||++..+ +|+.++|||||||++.||.||++||....... ++..-.+++++
T Consensus 744 APEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---AAMFkVGmyKv------------------------ 796 (1226)
T KOG4279|consen 744 APEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---AAMFKVGMYKV------------------------ 796 (1226)
T ss_pred ChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---Hhhhhhcceec------------------------
Confidence 99999876 48999999999999999999999997554321 11111222222
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..+.|.+.++++..||.+|+..||-+||+|.++|++||+..-
T Consensus 797 ------------------HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 797 ------------------HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred ------------------CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 233456778889999999999999999999999999999754
No 136
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.3e-39 Score=297.53 Aligned_cols=258 Identities=23% Similarity=0.334 Sum_probs=198.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||+|.+..+. .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 66 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC--------------DSPYIIGFYG 66 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC--------------CCCCeeeEEE
Confidence 36889999999999999999999999999999886532 2234577899999988 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++||||+.+..++.. ..+++..+..++.|++.||.|||+. |++|+||||+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nill~~~~---- 132 (279)
T cd06619 67 AFF----VENRISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRG---- 132 (279)
T ss_pred EEE----ECCEEEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCCHHHEEECCCC----
Confidence 887 45678899999944433332 2377888999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCCch
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++...... .....+|..|+|||.+.+..++.+
T Consensus 133 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 173 (279)
T cd06619 133 ---------------------------------------QVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIH 173 (279)
T ss_pred ---------------------------------------CEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCc
Confidence 4999999998765432 334578999999999998889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|+||||+++|+|++|+.||............... ........+.
T Consensus 174 ~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~--------------------------------- 218 (279)
T cd06619 174 SDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL--LQCIVDEDPP--------------------------------- 218 (279)
T ss_pred chHHHHHHHHHHHHhCCCCchhhcccccccchHHH--HHHHhccCCC---------------------------------
Confidence 99999999999999999999653321110000000 0000000000
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.......+..+.++|.+||..||.+||+++|+++||||+....
T Consensus 219 ----~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~ 261 (279)
T cd06619 219 ----VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYND 261 (279)
T ss_pred ----CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccC
Confidence 0001234567889999999999999999999999999987643
No 137
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.8e-39 Score=295.64 Aligned_cols=256 Identities=21% Similarity=0.338 Sum_probs=201.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
..|++.+.||+|+||.||+|.+..+++.||+|.+.........+..|+.+++.+. .|+|++++.+.+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~-------------~h~~i~~~~~~~ 72 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-------------HHRNIATYYGAF 72 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc-------------CCCCeeeEeeEE
Confidence 4789999999999999999999999999999998766555567788999888873 589999999988
Q ss_pred eeecCC--CeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 108 KIYSRN--GTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 108 ~~~~~~--~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
...... ....+++|||+ +++|.+.+.......+++..+..++.|++.|++|||++ +++|+||+|+||+++.++
T Consensus 73 ~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivh~dl~~~nili~~~~--- 148 (272)
T cd06637 73 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENA--- 148 (272)
T ss_pred eecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHEEECCCC---
Confidence 754322 35789999999 67888877664445588999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc---
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG--- 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~--- 258 (393)
.++|+|||++...... .....++..|+|||++.+
T Consensus 149 ----------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 188 (272)
T cd06637 149 ----------------------------------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 188 (272)
T ss_pred ----------------------------------------CEEEccCCCceecccccccCCcccccccccCHhHhccccC
Confidence 4999999998754322 233467889999999863
Q ss_pred --CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 259 --AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 259 --~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
..++.++|+||+||++|+|++|..||...... .. ....... +.
T Consensus 189 ~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~------~~---~~~~~~~-~~------------------------- 233 (272)
T cd06637 189 PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RA---LFLIPRN-PA------------------------- 233 (272)
T ss_pred cCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH------HH---HHHHhcC-CC-------------------------
Confidence 35788999999999999999999999643311 00 0000000 00
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
........+..+.+||.+||..||.+|||+.++++||||
T Consensus 234 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 234 -----------PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred -----------CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 000012334578899999999999999999999999998
No 138
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.3e-39 Score=305.07 Aligned_cols=256 Identities=20% Similarity=0.334 Sum_probs=197.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||++.+..+++.+|+|++.... .....+.+|+.++..+ .|++++++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~ 66 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG--------------DNQWITTL 66 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC--------------CCCCEeeE
Confidence 47999999999999999999999999999999986421 2223466777777776 78899999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. ....+++||||+ +++|.+++.... ..+++..++.++.|++.||.|||+. |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~-~iiHrDlkp~Nili~~~~- 139 (332)
T cd05623 67 HYAFQ----DENNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNG- 139 (332)
T ss_pred EEEEe----cCCEEEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCC-
Confidence 88887 667899999999 789988886533 3488999999999999999999998 999999999999998666
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++...... .....||+.|+|||++..
T Consensus 140 ------------------------------------------~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (332)
T cd05623 140 ------------------------------------------HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 177 (332)
T ss_pred ------------------------------------------CEEEeecchheecccCCcceecccccCccccCHHHHhc
Confidence 4999999988654221 123468999999999873
Q ss_pred -----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 259 -----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 259 -----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
..++.++|||||||++|+|++|+.||...+ .......+.......+
T Consensus 178 ~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~~----------------------- 228 (332)
T cd05623 178 MEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKERFQ----------------------- 228 (332)
T ss_pred cccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC------HHHHHHHHhCCCcccc-----------------------
Confidence 357889999999999999999999997544 1122221111000000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
........+..+.+||++||+.++.+ |++++|+++||||.++
T Consensus 229 --------------~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 229 --------------FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred --------------CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 00001235678889999999765554 6899999999999875
No 139
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.8e-39 Score=297.02 Aligned_cols=255 Identities=26% Similarity=0.446 Sum_probs=204.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.+|++.+.||.|++|.||+|.+..+++.|++|.+.... ...+.+.+|+.+++.+ .|+|++++++.
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~ 84 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL--------------KNPNIVNFLDS 84 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhc--------------CCCceeeeeee
Confidence 47999999999999999999999999999999886432 2345677899999988 88999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+...++|+||+ +++|...+... .+++.++..++.|++.|+++||++ |++|+||+|+||+++.++
T Consensus 85 ~~----~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~-~i~H~dL~p~Nili~~~~---- 152 (296)
T cd06655 85 FL----VGDELFVVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGMDG---- 152 (296)
T ss_pred Ee----cCceEEEEEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC----
Confidence 87 567899999999 67777766542 488999999999999999999998 999999999999997766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...... .....++..|+|||.+.+..++
T Consensus 153 ---------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 193 (296)
T cd06655 153 ---------------------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 193 (296)
T ss_pred ---------------------------------------CEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCC
Confidence 4999999987755332 2234678899999999988889
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+|||||++|+|++|+.||...+. ......+.. ...+.
T Consensus 194 ~~~Dv~slGvil~~lltg~~pf~~~~~------~~~~~~~~~--~~~~~------------------------------- 234 (296)
T cd06655 194 PKVDIWSLGIMAIEMVEGEPPYLNENP------LRALYLIAT--NGTPE------------------------------- 234 (296)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh--cCCcc-------------------------------
Confidence 999999999999999999999965441 111111111 00000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 392 (393)
...+...+..+.++|++||..||.+|||+.+++.||||+.++..
T Consensus 235 ------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~ 278 (296)
T cd06655 235 ------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPL 278 (296)
T ss_pred ------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcccc
Confidence 01123345678899999999999999999999999999987754
No 140
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.1e-39 Score=299.41 Aligned_cols=257 Identities=26% Similarity=0.448 Sum_probs=205.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..+|++.+.||+|++|.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|++++++
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~~~ 83 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN--------------KNPNIVNYLD 83 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC--------------CCCCEeeEEE
Confidence 368999999999999999999999999999999886432 2335567888999888 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+.+.++||||+ ++++.+.+.+. .++...+..++.|++.||.+||+. |++|+||||+||+++.++
T Consensus 84 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~-~i~H~dL~p~Nili~~~~--- 152 (297)
T cd06656 84 SYL----VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILLGMDG--- 152 (297)
T ss_pred EEe----cCCEEEEeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC---
Confidence 887 567899999999 77888777543 378899999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||++...... .....+++.|++||.+.+..+
T Consensus 153 ----------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 192 (297)
T cd06656 153 ----------------------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 192 (297)
T ss_pred ----------------------------------------CEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCC
Confidence 4999999988754332 223467889999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+|||||++|++++|..||...+... .+..+ ...+. |
T Consensus 193 ~~~~Di~slGvil~~l~tg~~pf~~~~~~~------~~~~~-~~~~~-~------------------------------- 233 (297)
T cd06656 193 GPKVDIWSLGIMAIEMVEGEPPYLNENPLR------ALYLI-ATNGT-P------------------------------- 233 (297)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCCcch------heeee-ccCCC-C-------------------------------
Confidence 999999999999999999999996543211 00000 00000 0
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSHY 393 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~ 393 (393)
....+...+..+.+++.+||..||.+||+++++++||||+..+..+
T Consensus 234 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (297)
T cd06656 234 ------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLS 279 (297)
T ss_pred ------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccccc
Confidence 0001233456678999999999999999999999999999887654
No 141
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.5e-39 Score=296.27 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=208.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 66 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI--------------RHPFLVNL 66 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCCccce
Confidence 47999999999999999999999999999999987532 2345677899999998 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+..+++||||+ +++|.+.+... ..++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~~~----~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~-~i~H~dl~p~nili~~~~- 138 (290)
T cd05580 67 YGSFQ----DDSNLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL-DIVYRDLKPENLLLDSDG- 138 (290)
T ss_pred eeEEE----cCCeEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCC-
Confidence 99887 667899999999 88998888665 4589999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...........+++.|+|||.+.+...+
T Consensus 139 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 176 (290)
T cd05580 139 ------------------------------------------YIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYG 176 (290)
T ss_pred ------------------------------------------CEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCC
Confidence 49999999988765555556788999999999888889
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|..||...+ .......+.
T Consensus 177 ~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~--------------------------------------- 211 (290)
T cd05580 177 KAVDWWALGILIYEMLAGYPPFFDDN------PIQIYEKIL--------------------------------------- 211 (290)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHh---------------------------------------
Confidence 99999999999999999999996544 111111111
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPRR 390 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~~ 390 (393)
.....++...+..+.++|.+||..||.+|+ +++|+++||||+.+.
T Consensus 212 ---~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 212 ---EGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred ---cCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 011112334467888999999999999999 999999999998753
No 142
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.9e-39 Score=317.18 Aligned_cols=253 Identities=22% Similarity=0.313 Sum_probs=203.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-CceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-KTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
...|.+.+.||+|++|.||+|.+..+ ++.||+|.+.... .....+.+|+.+++.+ .|+||++++
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l--------------~Hpniv~~~ 131 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC--------------DHFGIVKHF 131 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC--------------CCCCEeEEE
Confidence 45699999999999999999998888 7889999765432 2234567899999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+. .++..++||||+ +++|.+.+... ....+++.++..++.|++.||.|||++ +|+||||||+|||++.++
T Consensus 132 ~~~~----~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~~~~ 206 (478)
T PTZ00267 132 DDFK----SDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDLKSANIFLMPTG 206 (478)
T ss_pred EEEE----ECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCcCHHhEEECCCC
Confidence 9887 567899999999 78888776432 223588899999999999999999998 999999999999998766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVL 256 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~ 256 (393)
.++|+|||++...... ....+||+.|+|||++
T Consensus 207 -------------------------------------------~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 243 (478)
T PTZ00267 207 -------------------------------------------IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELW 243 (478)
T ss_pred -------------------------------------------cEEEEeCcCceecCCccccccccccCCCccccCHhHh
Confidence 4999999998865432 2234689999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+..++.++|||||||++|+|++|+.||...+ ....+..+.. +..
T Consensus 244 ~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~------~~~~~~~~~~--~~~--------------------------- 288 (478)
T PTZ00267 244 ERKRYSKKADMWSLGVILYELLTLHRPFKGPS------QREIMQQVLY--GKY--------------------------- 288 (478)
T ss_pred CCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh--CCC---------------------------
Confidence 99889999999999999999999999996543 1111111111 110
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.+++...+..+.++|.+||..||.+||++.+++.|||++.
T Consensus 289 ------------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 289 ------------DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred ------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 0122345567889999999999999999999999999864
No 143
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.4e-39 Score=299.45 Aligned_cols=259 Identities=25% Similarity=0.353 Sum_probs=201.5
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
..++.|+++++||+|+||.||+|.+..+++.+++|.+.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 74 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC--------------NHPYIVKL 74 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC--------------CCCcEeee
Confidence 44678999999999999999999999999999999987542 2345677899999988 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. .+...++||||+ ++++...+... ...++...+..++.|++.|+.+||++ +++|+||+|+||+++.++
T Consensus 75 ~~~~~----~~~~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nili~~~~- 147 (292)
T cd06644 75 LGAFY----WDGKLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLLTLDG- 147 (292)
T ss_pred EEEEE----eCCeEEEEEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcC-CeeecCCCcceEEEcCCC-
Confidence 99887 456899999999 55555554432 24589999999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~- 258 (393)
.++|+|||.+...... .....++..|+|||.+.+
T Consensus 148 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 185 (292)
T cd06644 148 ------------------------------------------DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCE 185 (292)
T ss_pred ------------------------------------------CEEEccCccceeccccccccceecCCccccCceeeccc
Confidence 4999999987654322 223457889999999853
Q ss_pred ----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 259 ----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 259 ----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
..++.++|+|||||++|+|++|..||...+. ......+ ....+.
T Consensus 186 ~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~---~~~~~~----------------------- 233 (292)
T cd06644 186 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKI---AKSEPP----------------------- 233 (292)
T ss_pred cccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH------HHHHHHH---hcCCCc-----------------------
Confidence 3468899999999999999999999965431 1111111 111000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....+...+..+.++|++||..||++||+++++++||||+.+..
T Consensus 234 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 277 (292)
T cd06644 234 -------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS 277 (292)
T ss_pred -------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 00112344567889999999999999999999999999987653
No 144
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.1e-38 Score=294.73 Aligned_cols=281 Identities=30% Similarity=0.440 Sum_probs=210.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+|++.+.||+|+||.||+|.+..++..||+|.+...... ...+.+|+.+++.+ .|+|++++.+
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ni~~~~~ 70 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL--------------KHANIVLLHD 70 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc--------------CCCCEeEEEE
Confidence 5899999999999999999999999999999998654322 23567899999998 8899999988
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .+...++||||+++++.+.+.... ..++...+..++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nil~~~~~---- 140 (291)
T cd07870 71 IIH----TKETLTFVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ-HILHRDLKPQNLLISYLG---- 140 (291)
T ss_pred EEe----cCCeEEEEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEEcCCC----
Confidence 876 566899999999888888776543 3478888999999999999999998 999999999999997666
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+. .+
T Consensus 141 ---------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 181 (291)
T cd07870 141 ---------------------------------------ELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDY 181 (291)
T ss_pred ---------------------------------------cEEEeccccccccCCCCCCCCCccccccccCCceeecCCCC
Confidence 4999999988654321 2334568899999998764 47
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||...+. ..+++..+....|..+............+ .... .....+...
T Consensus 182 ~~~~Dv~slG~~l~~l~~g~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~ 251 (291)
T cd07870 182 SSALDIWGAGCIFIEMLQGQPAFPGVSD-----VFEQLEKIWTVLGVPTEDTWPGVSKLPNY-KPEW----FLPCKPQQL 251 (291)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCchh-----HHHHHHHHHHHcCCCChhhhhhhhhcccc-cchh----ccccCCcch
Confidence 8899999999999999999999975442 34566666666665544433222111100 0000 000000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..... . ...+..+.+++.+||..||.+|||+.|++.||||
T Consensus 252 ~~~~~-~----~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 252 RVVWK-R----LSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhcc-c----cCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00000 0 1124677899999999999999999999999998
No 145
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.1e-39 Score=303.33 Aligned_cols=286 Identities=27% Similarity=0.425 Sum_probs=217.4
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++.+|++.+.||+|+||.||+|.+..+++.||||.+... ........+|+.+++.+ .|+|+++
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~ni~~ 68 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL--------------DHENVIA 68 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhc--------------CCCCccc
Confidence 456899999999999999999999999999999987642 22234566799999988 7899999
Q ss_pred ccccceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+..... .....++++||++++|.+.+... ..+++..+..++.|++.||.|||++ +++|+||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dlkp~Nil~~~~~ 145 (337)
T cd07858 69 IKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNANC 145 (337)
T ss_pred hHHheecccccccCcEEEEEeCCCCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCC
Confidence 9987763321 22468999999998998887654 4589999999999999999999998 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++...... .....++..|+|||.+..
T Consensus 146 -------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 182 (337)
T cd07858 146 -------------------------------------------DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLN 182 (337)
T ss_pred -------------------------------------------CEEECcCccccccCCCcccccccccccCccChHHHhc
Confidence 4999999998765332 223457889999999875
Q ss_pred -CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc--ccccCCCCCeeeccC
Q psy12288 259 -AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT--LRYFTPQGNFRRIDN 335 (393)
Q Consensus 259 -~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~ 335 (393)
..++.++|+|||||++|+|++|+.||...+ .......+..+.|..+.+.+...... ..+. .....
T Consensus 183 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 250 (337)
T cd07858 183 CSEYTTAIDVWSVGCIFAELLGRKPLFPGKD------YVHQLKLITELLGSPSEEDLGFIRNEKARRYI------RSLPY 250 (337)
T ss_pred CCCCCCcccHHHHHHHHHHHHcCCCCCCCCC------hHHHHHHHHHHhCCCChHHhhhcCchhhhHHH------HhcCc
Confidence 457899999999999999999999997654 45566677777777665544211100 0000 00000
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
. ... .........+..+.++|++||+.||++|||++|+++||||+...
T Consensus 251 ~-~~~------~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 251 T-PRQ------SFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred c-ccc------CHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 0 000 00011124567889999999999999999999999999998754
No 146
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=8.6e-39 Score=294.77 Aligned_cols=280 Identities=30% Similarity=0.488 Sum_probs=216.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|++|.||+|.+..+++.|++|.++.. ....+.+.+|+.+++.+ .|+|+++++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~ 66 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL--------------RHENIVNLK 66 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc--------------CCCCeeehh
Confidence 3799999999999999999999999999999988643 22346678999999999 789999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+...+++|||++++++..+.... ..++..++..++.|++.||+|||++ +++|+||+|+||+++.++
T Consensus 67 ~~~~----~~~~~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~ni~~~~~~--- 137 (288)
T cd07833 67 EAFR----RKGRLYLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENILVSESG--- 137 (288)
T ss_pred heEE----ECCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCC---
Confidence 9987 466799999999777777665543 4488999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcC-
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGA- 259 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~- 259 (393)
.++|+|||++...... .....++..|+|||++.+.
T Consensus 138 ----------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~ 177 (288)
T cd07833 138 ----------------------------------------VLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDT 177 (288)
T ss_pred ----------------------------------------CEEEEeeecccccCCCccccccCcccccCCcCCchhcCCC
Confidence 4999999998765432 2234678899999999888
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+||||+++|+|++|..||...+ ..+.+..+....+..+............+. . ........
T Consensus 178 ~~~~~~Dv~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~- 245 (288)
T cd07833 178 NYGKPVDVWAIGCIMAELLDGEPLFPGDS------DIDQLYLIQKCLGPLPPSHQELFSSNPRFA-G----VAFPEPSQ- 245 (288)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHhhhcccCcccc-c----cccCCCCC-
Confidence 78999999999999999999999997654 345566666666766654433221111000 0 00000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... .++...+..+.+||++||..+|.+|||++++++||||
T Consensus 246 --~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 246 --PESLER--RYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred --cHHHHH--hcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 001111 1223457889999999999999999999999999998
No 147
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.8e-39 Score=296.46 Aligned_cols=257 Identities=24% Similarity=0.335 Sum_probs=202.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
...|++.+.||+|+||.||+|.+..+++.+|+|++.........+..|+.+++.+. .|+|++++.+.
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~-------------~h~~i~~~~~~ 81 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS-------------HHRNIATYYGA 81 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc-------------CCCcEEEEeee
Confidence 45899999999999999999999999999999998765544566788888888873 68999999998
Q ss_pred ceeec--CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 107 FKIYS--RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 107 ~~~~~--~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.... ..+.+++++|||+ ++++.+++.......+++..+..++.|++.|++|||++ +++|+||+|+||+++.++
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dl~~~nili~~~~-- 158 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-KVIHRDIKGQNVLLTENA-- 158 (282)
T ss_pred hhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC--
Confidence 86432 2356899999999 56888887665445588888999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc--
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG-- 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~-- 258 (393)
.++|+|||++...... .....++..|+|||.+..
T Consensus 159 -----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~ 197 (282)
T cd06636 159 -----------------------------------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 197 (282)
T ss_pred -----------------------------------------CEEEeeCcchhhhhccccCCCcccccccccCHhhcCccc
Confidence 4999999988754322 233467889999999863
Q ss_pred ---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 259 ---AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 259 ---~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
..++.++|+|||||++|+|++|..||...... .....+. ...+.
T Consensus 198 ~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~------~~~~~~~---~~~~~------------------------ 244 (282)
T cd06636 198 NPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM------RALFLIP---RNPPP------------------------ 244 (282)
T ss_pred CcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH------hhhhhHh---hCCCC------------------------
Confidence 45788999999999999999999999643311 1111000 00000
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.......+..+.+||++||..||.+|||+.|+++||||
T Consensus 245 -------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 245 -------------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred -------------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 00012345688999999999999999999999999997
No 148
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=5.3e-39 Score=297.21 Aligned_cols=281 Identities=26% Similarity=0.364 Sum_probs=213.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|++|.||+|.+..+++.+++|.++.... ....+.+|+.+++.+ .|+|++++.
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ni~~~~ 70 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL--------------QHPNIVTVK 70 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc--------------CCCCEEEEE
Confidence 479999999999999999999999999999998874322 223456799999998 789999998
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+.. ......++||||++++|.+.+.... ..+++..++.++.|++.||+|||++ |++|+||+|+||+++.++
T Consensus 71 ~~~~~--~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~--- 143 (293)
T cd07843 71 EVVVG--SNLDKIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLLNNRG--- 143 (293)
T ss_pred EEEEe--cCCCcEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCC---
Confidence 87762 2237899999999888888876543 3589999999999999999999998 999999999999998765
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC-
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~- 260 (393)
.++|+|||++...... .....+++.|+|||.+.+..
T Consensus 144 ----------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 183 (293)
T cd07843 144 ----------------------------------------ILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKE 183 (293)
T ss_pred ----------------------------------------cEEEeecCceeeccCCccccccccccccccCchhhcCCcc
Confidence 4999999988765433 22345688899999987654
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|..||...+ .......+....+..+...+.............. ...
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 248 (293)
T cd07843 184 YSTAIDMWSVGCIFAELLTKKPLFPGKS------EIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTF---------TKY 248 (293)
T ss_pred ccchhhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCchHHHHHhhccchhccccc---------ccc
Confidence 5899999999999999999999997655 4455666666666555544433221110000000 000
Q ss_pred hHHHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 341 LYQVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....+ ...++.. .+..+.++|++||+.||++|||+.|+++||||
T Consensus 249 ~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 249 PYNQL--RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cchhh--hccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00001 1112222 46778899999999999999999999999998
No 149
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.5e-39 Score=304.59 Aligned_cols=256 Identities=19% Similarity=0.327 Sum_probs=198.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||++++..+++.||+|++.... .....+.+|..+++.+ .|++++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~l 66 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG--------------DCQWITTL 66 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC--------------CCCCEeeE
Confidence 47999999999999999999999999999999986421 2234466778888777 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. ..++.++||||+ +++|..++.... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~-~iiHrDlkp~Nill~~~~- 139 (331)
T cd05624 67 HYAFQ----DENYLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQL-HYVHRDIKPDNVLLDMNG- 139 (331)
T ss_pred EEEEE----cCCEEEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCchHHEEEcCCC-
Confidence 88887 677899999999 888888886532 3588999999999999999999998 999999999999998666
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++....... ....||+.|+|||++.+
T Consensus 140 ------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (331)
T cd05624 140 ------------------------------------------HIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQA 177 (331)
T ss_pred ------------------------------------------CEEEEeccceeeccCCCceeeccccCCcccCCHHHHhc
Confidence 49999999987654321 22468999999999876
Q ss_pred -----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 259 -----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 259 -----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
..++.++|+|||||++|+|++|+.||...+ .......+.......+
T Consensus 178 ~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~~----------------------- 228 (331)
T cd05624 178 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHEERFQ----------------------- 228 (331)
T ss_pred cccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC------HHHHHHHHHcCCCccc-----------------------
Confidence 457889999999999999999999997544 1122222211100000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
........+..+.++|.+||+.++.+ |++++++++||||.+.
T Consensus 229 --------------~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 229 --------------FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred --------------CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 00001234677889999999976654 5689999999999874
No 150
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=7e-39 Score=303.04 Aligned_cols=287 Identities=28% Similarity=0.418 Sum_probs=218.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|++.+.||+|+||.||+|.+..++..||+|.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~ 78 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM--------------KHENVIG 78 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc--------------CCCCccc
Confidence 5679999999999999999999999999999999886432 2234577899999999 7899999
Q ss_pred ccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+.+.+..... .....++|||++++++...+.. ..+++..++.++.|++.||++||+. |++||||||+||+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~-gi~H~dlkp~Nill~~~ 154 (343)
T cd07880 79 LLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA-GIIHRDLKPGNLAVNED 154 (343)
T ss_pred eeeeecCCccccccceEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCC
Confidence 9888763221 1235789999998888877754 3488999999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcC-
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA- 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~- 259 (393)
+ .++|+|||.+...........+++.|++||.+.+.
T Consensus 155 ~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 191 (343)
T cd07880 155 C-------------------------------------------ELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWM 191 (343)
T ss_pred C-------------------------------------------CEEEeecccccccccCccccccCCcccCHHHHhCCC
Confidence 5 49999999988766555556678999999999763
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+||||+++|++++|..||.+.+ .......+....+..|..+.......... .........
T Consensus 192 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 258 (343)
T cd07880 192 HYTQTVDIWSVGCIMAEMLTGKPLFKGHD------HLDQLMEIMKVTGTPSKEFVQKLQSEDAK-------NYVKKLPRF 258 (343)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHhhcchhHH-------HHHHhcccc
Confidence 57899999999999999999999997554 34556666666666666554432211000 000000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+ ..+....+..+.++|.+||+.||.+|||+.+++.||||+...
T Consensus 259 -~~~~~---~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 259 -RKKDF---RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred -CcchH---HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence 00000 011234566789999999999999999999999999998764
No 151
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9e-39 Score=296.19 Aligned_cols=260 Identities=26% Similarity=0.445 Sum_probs=206.2
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
..|+.. .+|++.+.||+|++|.||+|.+..++..|++|.+.... ...+.+.+|+.+++.+ .|+|
T Consensus 14 ~~~~~~-~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~ 78 (296)
T cd06654 14 SVGDPK-KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN--------------KNPN 78 (296)
T ss_pred ccCCcc-cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC--------------CCCC
Confidence 344443 59999999999999999999999999999999887432 2345677899999988 8999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
++++.+.+. .+.+.++||||+ +++|.+.+... .++..++..++.|++.||+|||+. |++|+||||+||+++
T Consensus 79 v~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~-gi~H~dLkp~Nill~ 150 (296)
T cd06654 79 IVNYLDSYL----VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 150 (296)
T ss_pred EeeEEEEEE----eCCEEEEeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEc
Confidence 999999887 466899999999 77888877542 378899999999999999999998 999999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEV 255 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~ 255 (393)
.++ .++|+|||++...... .....+++.|+|||.
T Consensus 151 ~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~ 187 (296)
T cd06654 151 MDG-------------------------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187 (296)
T ss_pred CCC-------------------------------------------CEEECccccchhccccccccCcccCCccccCHHH
Confidence 766 4999999987754322 223467889999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
+.+..++.++|+|||||++|+|++|+.||...... .....+.. .+. +
T Consensus 188 ~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~------~~~~~~~~-~~~-~------------------------- 234 (296)
T cd06654 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIAT-NGT-P------------------------- 234 (296)
T ss_pred HcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH------HhHHHHhc-CCC-C-------------------------
Confidence 99888899999999999999999999999654421 11111100 000 0
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....+...+..+.++|.+||..||++|||+.++++||||...+.
T Consensus 235 ------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 235 ------------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred ------------CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 00012234567889999999999999999999999999987654
No 152
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.3e-38 Score=301.16 Aligned_cols=289 Identities=30% Similarity=0.455 Sum_probs=219.4
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+.++|++.+.||+|++|.||+|.+..+++.||+|.+... ......+.+|+.+++.+ .|+|++
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv 77 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM--------------DHENVI 77 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc--------------cCCCHH
Confidence 3567999999999999999999999999999999987642 22234566799999998 789999
Q ss_pred eccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 102 RLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 102 ~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
++.+.+..... .....++|+|+++++|.+.+.. ..+++..+..++.|++.||++||+. |++|+||+|+||+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nill~~ 153 (343)
T cd07851 78 GLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNE 153 (343)
T ss_pred HHHHHhhccccccccccEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECC
Confidence 98887753221 2335899999999999888765 3489999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcC
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~ 259 (393)
++ .++|+|||++...........++..|+|||.+.+.
T Consensus 154 ~~-------------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~ 190 (343)
T cd07851 154 DC-------------------------------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 190 (343)
T ss_pred CC-------------------------------------------CEEEccccccccccccccCCcccccccCHHHHhCC
Confidence 66 49999999988765555556778899999998763
Q ss_pred -CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 260 -GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 -~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.++.++|+||||+++|++++|+.||.... ....+..+....+..++.++.+...... ... ......
T Consensus 191 ~~~~~~~DvwslGv~l~elltg~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~ 257 (343)
T cd07851 191 MHYNQTVDIWSVGCIMAELLTGKTLFPGSD------HIDQLKRIMNLVGTPDEELLQKISSESA-----RNY--IQSLPQ 257 (343)
T ss_pred CCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHhcCCCCHHHHhhccchhH-----HHH--HHhccc
Confidence 57899999999999999999999997654 4456667777777666655443221000 000 000000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
. ....+.. .....+..+.++|++||..||.+|||+.++++||||.....
T Consensus 258 ~-~~~~~~~---~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~ 306 (343)
T cd07851 258 M-PKKDFKE---VFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD 306 (343)
T ss_pred c-CCCCHHH---HhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence 0 0000000 01134678899999999999999999999999999987543
No 153
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=6.9e-40 Score=307.69 Aligned_cols=244 Identities=22% Similarity=0.298 Sum_probs=191.0
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHH-HHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIV-LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+.||+|+||.||+|.+..+++.||+|++..... ....+..|.. +++.+ .|+|++++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~--------------~hp~iv~~~~~~~ 66 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV--------------KHPFLVGLHYSFQ 66 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC--------------CCCCCccEEEEEe
Confidence 368999999999999999999999999875321 1223334443 34445 7999999988886
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.++..++||||+ +++|...+... ..+++..+..++.||+.||+|||+. |++||||||+||+++.++
T Consensus 67 ----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~-givH~Dlkp~NIll~~~~------ 133 (325)
T cd05604 67 ----TTEKLYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQG------ 133 (325)
T ss_pred ----cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCC------
Confidence 567899999999 77887777554 3588999999999999999999998 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||+.|+|||++.+..++.+
T Consensus 134 -------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 176 (325)
T cd05604 134 -------------------------------------HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNT 176 (325)
T ss_pred -------------------------------------CEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCc
Confidence 49999999986432 12234568999999999999889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|+|++|..||...+. ......+..
T Consensus 177 ~DvwslG~il~el~~G~~pf~~~~~------~~~~~~~~~---------------------------------------- 210 (325)
T cd05604 177 VDWWCLGAVLYEMLYGLPPFYCRDV------AEMYDNILH---------------------------------------- 210 (325)
T ss_pred CccccccceehhhhcCCCCCCCCCH------HHHHHHHHc----------------------------------------
Confidence 9999999999999999999975441 111111111
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWLNPR 389 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~~~~ 389 (393)
....+....+..+.++|++||..||.+||++ .++++||||+..
T Consensus 211 --~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 211 --KPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred --CCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 0111123355678899999999999999976 599999999875
No 154
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=8e-39 Score=291.06 Aligned_cols=249 Identities=27% Similarity=0.395 Sum_probs=199.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc------cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+.|++.+.||+|++|.||.|.+..+++.||+|.+..... ....+.+|+.+++.+ .|+|++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~ 67 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL--------------QHERIV 67 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC--------------CCCCee
Confidence 469999999999999999999999999999998764321 124567788999988 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. .....++++|++ ++++.+.+... ..++...+..++.|++.||++||+. |++|+||+|+||+++.+
T Consensus 68 ~~~~~~~----~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nilv~~~ 140 (263)
T cd06625 68 QYYGCLR----DDETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSN-MIVHRDIKGANILRDSA 140 (263)
T ss_pred eeEEEEc----cCCeEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCC
Confidence 9999887 556899999999 67888877654 3488899999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE 254 (393)
+ .++|+|||++....... ....++..|+|||
T Consensus 141 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 177 (263)
T cd06625 141 G-------------------------------------------NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPE 177 (263)
T ss_pred C-------------------------------------------CEEEeecccceeccccccccccccCCCcCccccCcc
Confidence 6 49999999986543211 2235678999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+.+..++.++|+||||+++|+|++|+.||...+. ..........
T Consensus 178 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~----------------------------- 222 (263)
T cd06625 178 VISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA------MAAIFKIATQ----------------------------- 222 (263)
T ss_pred eeccCCCCchhhhHHHHHHHHHHHhCCCCccccch------HHHHHHHhcc-----------------------------
Confidence 99998899999999999999999999999964331 1111111000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.....++...+..+.++|++||..+|.+|||+.|+++||||
T Consensus 223 -----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 223 -----------PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred -----------CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 00111234456778899999999999999999999999998
No 155
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=8.1e-39 Score=298.19 Aligned_cols=283 Identities=25% Similarity=0.356 Sum_probs=205.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||++.+..++..+|+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 66 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC--------------NSPYIVGFYG 66 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC--------------CCCCCCeEEE
Confidence 36999999999999999999999999999999886432 2234577899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .++.++++|||+ +++|.+++... ..+++..+..++.|++.||+|||+..+++|+||||+||+++.++
T Consensus 67 ~~~----~~~~~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~--- 137 (308)
T cd06615 67 AFY----SDGEISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG--- 137 (308)
T ss_pred EEe----eCCEEEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC---
Confidence 887 567899999999 67888887654 44889999999999999999999744899999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....++..|+|||.+.+..++.
T Consensus 138 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 177 (308)
T cd06615 138 ----------------------------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTV 177 (308)
T ss_pred ----------------------------------------cEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCc
Confidence 4999999988654322 23456789999999998888899
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+||||+++|+|++|..||...+... .....+..+.......... .. ...............
T Consensus 178 ~~DiwslG~~l~~l~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~ 241 (308)
T cd06615 178 QSDIWSLGLSLVEMAIGRYPIPPPDAKE----------LEAMFGRPVSEGEAKESHR-PV-----SGHPPDSPRPMAIFE 241 (308)
T ss_pred cchHHHHHHHHHHHHhCCCCCCCcchhh----------HHHhhcCccccccccCCcc-cc-----cCCCCCccchhhHHH
Confidence 9999999999999999999996443111 1111111111000000000 00 000000000000111
Q ss_pred HHhh-----hccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 344 VLTE-----KYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~-----~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.... ....+ ...+..+.+||.+||..||.+|||+.|+++||||.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 242 LLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 1110 00111 1256678999999999999999999999999999874
No 156
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.7e-38 Score=286.62 Aligned_cols=250 Identities=23% Similarity=0.385 Sum_probs=199.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||.|++|.||++.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|++++++.+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL--------------KHPNIVAYRE 66 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC--------------CCCCeeeeee
Confidence 5899999999999999999999999999999886432 2234567888888888 7888988887
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ..+..++++||++ ++++.+.+.......+++.++..++.|++.|+++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~---~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~i~H~di~p~nil~~~~~--- 139 (257)
T cd08223 67 SWE---GEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK-HILHRDLKTQNVFLTRTN--- 139 (257)
T ss_pred eec---CCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCchhEEEecCC---
Confidence 664 2345689999999 67888887665445689999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....+++.|+|||++.+..+
T Consensus 140 ----------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 179 (257)
T cd08223 140 ----------------------------------------IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPY 179 (257)
T ss_pred ----------------------------------------cEEEecccceEEecccCCccccccCCcCccChhHhcCCCC
Confidence 4999999988654321 223457889999999999888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++++|++|+.||...+ .......+. .+..|
T Consensus 180 ~~~~Dv~slG~il~~l~~g~~~~~~~~------~~~~~~~~~--~~~~~------------------------------- 220 (257)
T cd08223 180 NYKSDVWALGCCVYEMATLKHAFNAKD------MNSLVYRII--EGKLP------------------------------- 220 (257)
T ss_pred CchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHH--hcCCC-------------------------------
Confidence 999999999999999999999996433 111111111 11111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..+...+..+.+++.+||+.||.+|||+.++++||||
T Consensus 221 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 221 --------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred --------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1123456788899999999999999999999999997
No 157
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.1e-38 Score=286.98 Aligned_cols=249 Identities=26% Similarity=0.394 Sum_probs=202.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.|++|.+... ......+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 66 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL--------------DSSYIIRYYE 66 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc--------------CCCCeehhee
Confidence 488999999999999999999999999999988643 23345677888888888 8999999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|.+.+.......++...+..++.|++.||.|||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~h~dl~~~nili~~~~--- 138 (256)
T cd08529 67 SFL----DKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAYD--- 138 (256)
T ss_pred eec----cCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEeCCC---
Confidence 887 567899999999 78888888765445688999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....+++.|+|||++.+..+
T Consensus 139 ----------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 178 (256)
T cd08529 139 ----------------------------------------NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPY 178 (256)
T ss_pred ----------------------------------------CEEEcccccceeccCccchhhccccCccccCHHHhcCCCC
Confidence 4999999988765432 223357889999999999889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++++|++|+.||...+ .......+.. +..+
T Consensus 179 ~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~------------------------------- 219 (256)
T cd08529 179 NEKSDVWALGVVLYECCTGKHPFDANN------QGALILKIIR--GVFP------------------------------- 219 (256)
T ss_pred CCccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHc--CCCC-------------------------------
Confidence 999999999999999999999996544 1111111111 1110
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..+...+..+.+++++||+.+|++||++.++++|||+
T Consensus 220 --------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 220 --------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred --------CCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 1122455678999999999999999999999999996
No 158
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.3e-39 Score=306.48 Aligned_cols=245 Identities=21% Similarity=0.326 Sum_probs=188.2
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||+|++..+++.||+|++...... ......|..++.... ...|++++++.+.+.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----------~~~~p~i~~~~~~~~--- 66 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL-----------LDESPFIVGLKFSFQ--- 66 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc-----------cCCCCcCcceEEEEe---
Confidence 79999999999999999999999998643211 122233444544431 126899999988887
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+|||++.++
T Consensus 67 -~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~-~ivHrDlkp~Nili~~~~--------- 133 (330)
T cd05586 67 -TDSDLYLVTDYMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKY-DIVYRDLKPENILLDATG--------- 133 (330)
T ss_pred -cCCeEEEEEcCCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCC---------
Confidence 667899999999 77888777654 4589999999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcC-CCCchhh
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA-GYGPAAD 266 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~D 266 (393)
.++|+|||++..... ......||+.|+|||++.+. .++.++|
T Consensus 134 ----------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D 179 (330)
T cd05586 134 ----------------------------------HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVD 179 (330)
T ss_pred ----------------------------------CEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccc
Confidence 499999999865322 22345689999999999765 4789999
Q ss_pred HHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHh
Q psy12288 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLT 346 (393)
Q Consensus 267 iwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (393)
||||||++|+|++|..||...+. ......+.. +.
T Consensus 180 vwslGvil~elltG~~Pf~~~~~------~~~~~~i~~--~~-------------------------------------- 213 (330)
T cd05586 180 FWSLGVLVFEMCCGWSPFYAEDT------QQMYRNIAF--GK-------------------------------------- 213 (330)
T ss_pred eeccccEEEEeccCCCCCCCCCH------HHHHHHHHc--CC--------------------------------------
Confidence 99999999999999999965431 111111110 00
Q ss_pred hhccCC-hhhHHHHHHHHHhccccCCCCCc----CHHHHhcCCCCCCC
Q psy12288 347 EKYHWS-KAEASDFADFLLPMLHVNQKLRA----SAADCLRHPWLNPR 389 (393)
Q Consensus 347 ~~~~~~-~~~~~~~~~li~~~L~~dP~~Rp----t~~ell~hp~~~~~ 389 (393)
..++ ...+..+.++|++||..||.+|| ++.++++||||++.
T Consensus 214 --~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 214 --VRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred --CCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 0011 12356778999999999999998 79999999999864
No 159
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2e-38 Score=291.50 Aligned_cols=277 Identities=30% Similarity=0.462 Sum_probs=209.5
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
|++.++||+|+||.||+|.+..+++.||+|.++..... .....+|+.+++.+. .|+|++++.+.+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-------------~h~~i~~~~~~~ 67 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS-------------PHPNILRLIEVL 67 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC-------------CCCCccceEEEE
Confidence 67899999999999999999999999999988753221 223346777777762 589999999887
Q ss_pred eeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 108 KIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.. ...+..++||||+++++.+.+.... ..+++.++..++.|++.||++||+. |++|+||+|+||+++. +
T Consensus 68 ~~--~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~p~ni~l~~-~------ 136 (282)
T cd07831 68 FD--RKTGRLALVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN-GIFHRDIKPENILIKD-D------ 136 (282)
T ss_pred ec--CCCCcEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEcC-C------
Confidence 62 2236789999999889998886643 3589999999999999999999998 9999999999999976 4
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcC-CCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA-GYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~ 264 (393)
.++|+|||++...... .....++..|+|||.+... .++.+
T Consensus 137 -------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 179 (282)
T cd07831 137 -------------------------------------ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPK 179 (282)
T ss_pred -------------------------------------CeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcc
Confidence 4999999998765322 2234578899999987654 46889
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|+|||||++|+|++|..||.+.+ ..+.+..+....+..+..+......... . .. ..+.......
T Consensus 180 ~Di~slGv~l~el~~~~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~---~~~~~~~~~~--- 244 (282)
T cd07831 180 MDIWAVGCVFFEILSLFPLFPGTN------ELDQIAKIHDVLGTPDAEVLKKFRKSRH-M--NY---NFPSKKGTGL--- 244 (282)
T ss_pred hhHHHHHHHHHHHHcCCcCCCCCC------HHHHHHHHHHHcCCCCHHHHHhhccccc-c--cc---cCcccccccH---
Confidence 999999999999999999997765 4556677777777777665322111100 0 00 0000000000
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
. .+....+..+.++|.+||..||++|||++++++||||
T Consensus 245 -~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 245 -R---KLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred -H---HHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0 0112457889999999999999999999999999998
No 160
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.6e-38 Score=299.12 Aligned_cols=286 Identities=27% Similarity=0.449 Sum_probs=215.4
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|.+.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+ .|+|+++
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~niv~ 78 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM--------------QHENVIG 78 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc--------------CCCCccc
Confidence 356999999999999999999999999999999988643 22234567899999998 7899999
Q ss_pred ccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+.+.+..... .....++|+|++..++..... ..++.+.+..++.|++.||+|||+. +++||||||+||+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dlkp~NIll~~~ 153 (342)
T cd07879 79 LLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA-GIIHRDLKPGNLAVNED 153 (342)
T ss_pred hhheecccccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCC
Confidence 9988763321 224579999999877766542 2488999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-C
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-A 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~ 259 (393)
+ .++|+|||++...........++..|+|||.+.+ .
T Consensus 154 ~-------------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 190 (342)
T cd07879 154 C-------------------------------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWM 190 (342)
T ss_pred C-------------------------------------------CEEEeeCCCCcCCCCCCCCceeeecccChhhhcCcc
Confidence 6 4999999998766554445567889999999876 4
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc-cccCCCCCeeeccCCCc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL-RYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 338 (393)
.++.++|+|||||++|+|++|+.||.+.+ ....+..+....|..+..+........ ..+. ...+....
T Consensus 191 ~~~~~~Dv~slGvil~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 259 (342)
T cd07879 191 HYNQTVDIWSVGCIMAEMLTGKTLFKGKD------YLDQLTQILKVTGVPGPEFVQKLEDKAAKSYI-----KSLPKYPR 259 (342)
T ss_pred ccCchHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHhcccchHHHH-----hhcCCccc
Confidence 57899999999999999999999997644 455666667766665554433221110 0000 00000000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
. .........+..+.+||++||+.||.+||++++++.||||...+.
T Consensus 260 ~-------~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 260 K-------DFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred c-------hHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0 000001134567889999999999999999999999999998764
No 161
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.5e-39 Score=295.52 Aligned_cols=258 Identities=25% Similarity=0.383 Sum_probs=202.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++++.||+|+||.||+|.+..++..||+|.+... ......+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~ 66 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKA--------------VSPYIVDFYG 66 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc--------------CCCcHHhhhh
Confidence 4789999999999999999999999999999988643 22235677899999988 8899999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+. .++..++||||+ ++++..++.... ...+++..+..++.|++.||.|||++.+++|+||||+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-- 140 (286)
T cd06622 67 AFF----IEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG-- 140 (286)
T ss_pred hee----cCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--
Confidence 887 567899999999 667766665421 235899999999999999999999744999999999999997765
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCC--
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAG-- 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~-- 260 (393)
.++|+|||.+...... .....++..|+|||.+.+..
T Consensus 141 -----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 179 (286)
T cd06622 141 -----------------------------------------QVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPN 179 (286)
T ss_pred -----------------------------------------CEEEeecCCcccccCCccccCCCccCccCcchhcCCCCC
Confidence 4999999988755332 23345788999999986543
Q ss_pred ----CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 261 ----YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 261 ----~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
++.++|+|||||++|+|++|+.||..... ......+.......+
T Consensus 180 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~-------------------------- 227 (286)
T cd06622 180 QNPTYTVQSDVWSLGLSILEMALGRYPYPPETY------ANIFAQLSAIVDGDP-------------------------- 227 (286)
T ss_pred ccCCCCcccchHhHHHHHHHHHhCCCCCCCcch------hhHHHHHHHHhhcCC--------------------------
Confidence 47899999999999999999999965431 111111111111111
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..++...+..+.++|.+||..+|.+||+++++++||||....
T Consensus 228 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 228 ------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred ------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 112344667888999999999999999999999999997654
No 162
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4.4e-39 Score=302.26 Aligned_cols=244 Identities=21% Similarity=0.330 Sum_probs=190.8
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHH-HHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIV-LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+.||+|+||.||+|++..+++.||+|++...... ...+..|.. +++.+ .|+|++++++.+.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~--------------~h~~Iv~~~~~~~ 66 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV--------------KHPFLVGLHFSFQ 66 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC--------------CCCCCCceeEEEE
Confidence 3699999999999999999999999998753211 122233332 34445 7899999988887
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.....++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+||+++.++
T Consensus 67 ----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-giiHrDlkp~Nili~~~~------ 133 (325)
T cd05602 67 ----TADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQG------ 133 (325)
T ss_pred ----cCCeEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCC------
Confidence 667899999999 77888777654 3488899999999999999999998 999999999999998766
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||+.|+|||++.+..++.+
T Consensus 134 -------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 176 (325)
T cd05602 134 -------------------------------------HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRT 176 (325)
T ss_pred -------------------------------------CEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCc
Confidence 49999999986432 12334568999999999999889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|+|++|..||...+ .......+..
T Consensus 177 ~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~---------------------------------------- 210 (325)
T cd05602 177 VDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILN---------------------------------------- 210 (325)
T ss_pred cccccccHHHHHHhcCCCCCCCCC------HHHHHHHHHh----------------------------------------
Confidence 999999999999999999997544 1122121111
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHH----HHhcCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA----DCLRHPWLNPR 389 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~----ell~hp~~~~~ 389 (393)
....+....+..+.++|.+||..||.+||++. ++++|+||...
T Consensus 211 --~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 211 --KPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred --CCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 01112234566788999999999999999875 89999999764
No 163
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.5e-38 Score=292.51 Aligned_cols=276 Identities=28% Similarity=0.470 Sum_probs=210.1
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++.++||.|++|.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|++++++++.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l--------------~~~~iv~~~~~ 66 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL--------------NHPNIVRLLDV 66 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc--------------CCCCccCHhhe
Confidence 678899999999999999999999999999887542 2234577899999998 78999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+. .+...+++|||+++++.+.+.......+++..+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 67 ~~----~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~-~~~H~dl~p~nil~~~~~----- 136 (283)
T cd07835 67 VH----SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLIDREG----- 136 (283)
T ss_pred ec----cCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCC-----
Confidence 86 56789999999988998888765534589999999999999999999998 999999999999998765
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~ 262 (393)
.++|+|||.+...... .....++..|+|||++.+. .++
T Consensus 137 --------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 178 (283)
T cd07835 137 --------------------------------------ALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYS 178 (283)
T ss_pred --------------------------------------cEEEeecccccccCCCccccCccccccCCCCCceeecCcccC
Confidence 4999999998755322 2233567889999988764 468
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|++||...+ ....+..+.+..+......+........+... . .....
T Consensus 179 ~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~---- 242 (283)
T cd07835 179 TPVDIWSIGCIFAEMVNRRPLFPGDS------EIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT---F---PKWAR---- 242 (283)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChHHhhhhhhchhhhhh---c---ccccc----
Confidence 89999999999999999999997654 44445555555555544433221111000000 0 00000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
. .........+..+.++|.+||+.||.+|||++|+++||||
T Consensus 243 ~---~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 243 Q---DLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred c---chhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0 0001113445678899999999999999999999999998
No 164
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.8e-39 Score=302.16 Aligned_cols=244 Identities=24% Similarity=0.349 Sum_probs=191.1
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHH-HHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIV-LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++||+|+||.||+|++..+++.||+|++..... ....+..|.. +++.+ .|+|++++.+.+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~--------------~h~~iv~~~~~~~ 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL--------------KHPFLVGLHYSFQ 66 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC--------------CCCCccceeeEEE
Confidence 369999999999999999999999999875321 1222333433 45555 7999999988876
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.....++||||+ +++|...+... ..+++..+..++.||+.||+|||+. |++||||||+||+++.++
T Consensus 67 ----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~------ 133 (321)
T cd05603 67 ----TAEKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSL-NIIYRDLKPENILLDSQG------ 133 (321)
T ss_pred ----cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCC------
Confidence 567899999999 67887776554 3488999999999999999999998 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||+.|+|||++.+..++.+
T Consensus 134 -------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 176 (321)
T cd05603 134 -------------------------------------HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRT 176 (321)
T ss_pred -------------------------------------CEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCc
Confidence 49999999886432 12233468999999999998889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|+|++|..||...+ .......+
T Consensus 177 ~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i------------------------------------------ 208 (321)
T cd05603 177 VDWWCLGAVLYEMLYGLPPFYSRD------VSQMYDNI------------------------------------------ 208 (321)
T ss_pred CcccccchhhhhhhcCCCCCCCCC------HHHHHHHH------------------------------------------
Confidence 999999999999999999997543 11111111
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWLNPR 389 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~~~~ 389 (393)
......++...+..+.++|.+||..||.+||++ .++++||||...
T Consensus 209 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 209 LHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred hcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 111112334556778899999999999999975 599999999864
No 165
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7.8e-39 Score=302.21 Aligned_cols=250 Identities=19% Similarity=0.275 Sum_probs=191.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.++||+|+||.||+|.+. .++..||+|+++... .....+.+|+.+++.+. .|+|
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~n 72 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG-------------NHLN 72 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc-------------cCcc
Confidence 368999999999999999999753 345679999987432 22345788999999884 6899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
|+++++.+. ..+..++++|||+ +|+|.+++....
T Consensus 73 iv~~~~~~~---~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T cd05102 73 VVNLLGACT---KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRF 149 (338)
T ss_pred eeeEEeEec---CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcccccc
Confidence 999998765 2345689999999 788888776421
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccC
Q psy12288 137 ------------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198 (393)
Q Consensus 137 ------------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
...++..++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDiKp~Nil~~~~~----------------- 211 (338)
T cd05102 150 QPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLSENN----------------- 211 (338)
T ss_pred ccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCccceEEEcCCC-----------------
Confidence 12367788899999999999999998 999999999999998766
Q ss_pred CcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHH
Q psy12288 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACM 273 (393)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~ 273 (393)
.++|+|||+++..... .....++..|+|||++.+..++.++|||||||+
T Consensus 212 --------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~i 265 (338)
T cd05102 212 --------------------------VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVL 265 (338)
T ss_pred --------------------------cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHH
Confidence 4999999998754321 112345678999999999889999999999999
Q ss_pred HHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC
Q psy12288 274 AFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS 352 (393)
Q Consensus 274 l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (393)
+|+|++ |..||.+.... ..+..... .+.. ...+
T Consensus 266 l~el~~~g~~pf~~~~~~------~~~~~~~~-~~~~---------------------------------------~~~~ 299 (338)
T cd05102 266 LWEIFSLGASPYPGVQIN------EEFCQRLK-DGTR---------------------------------------MRAP 299 (338)
T ss_pred HHHHHhCCCCCCCCCCcc------HHHHHHHh-cCCC---------------------------------------CCCC
Confidence 999997 99999754321 11111110 0000 0012
Q ss_pred hhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 353 KAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 353 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+..+.+++.+||..||.+|||+.|+++
T Consensus 300 ~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 300 ENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 344567889999999999999999999976
No 166
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=9.2e-39 Score=292.69 Aligned_cols=253 Identities=26% Similarity=0.407 Sum_probs=204.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||.|++|.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 66 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC--------------RSPYITKYYG 66 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHc--------------CCCCeeeeeE
Confidence 47899999999999999999999999999999887542 2234577899999998 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++|+|++ +++|.+.+... .++...+..++.|++.|+.+||++ +++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~--- 135 (274)
T cd06609 67 SFL----KGSKLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILLSEEG--- 135 (274)
T ss_pred EEE----ECCeEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCC---
Confidence 876 557899999999 67888877654 488999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+..+
T Consensus 136 ----------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 175 (274)
T cd06609 136 ----------------------------------------DVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGY 175 (274)
T ss_pred ----------------------------------------CEEEcccccceeecccccccccccCCccccChhhhccCCC
Confidence 4999999998765432 234467888999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||...+. ......+.. +. +.
T Consensus 176 ~~~sDv~slG~il~~l~tg~~p~~~~~~------~~~~~~~~~--~~-~~------------------------------ 216 (274)
T cd06609 176 DEKADIWSLGITAIELAKGEPPLSDLHP------MRVLFLIPK--NN-PP------------------------------ 216 (274)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcccCch------HHHHHHhhh--cC-CC------------------------------
Confidence 9999999999999999999999964431 111111100 00 00
Q ss_pred HHHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392 (393)
Q Consensus 342 ~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 392 (393)
..... .+..+.+++.+||..||.+|||++++++||||++.+++
T Consensus 217 --------~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 217 --------SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred --------CCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 00111 45678899999999999999999999999999988764
No 167
>KOG0986|consensus
Probab=100.00 E-value=3.2e-40 Score=300.06 Aligned_cols=256 Identities=25% Similarity=0.356 Sum_probs=213.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+.|..-++||+|+||.|+-|+...||+.+|.|.+.+.... ..-..+|-.+|..+ ..+.||.+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV--------------~s~FiVsl 250 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV--------------SSPFIVSL 250 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh--------------ccCcEEEE
Confidence 5688999999999999999999999999999977543211 23346788899998 66678888
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.-.|. ..+.+|+|+..| ||+|.-.+......+|++..++.++.+|+.||+.||.. +||+|||||+|||+|+.++
T Consensus 251 aYAfe----Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~-~iVYRDLKPeNILLDd~Gh 325 (591)
T KOG0986|consen 251 AYAFE----TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR-RIVYRDLKPENILLDDHGH 325 (591)
T ss_pred eeeec----CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc-ceeeccCChhheeeccCCC
Confidence 87787 778899999999 78887777666666799999999999999999999998 9999999999999999884
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~ 260 (393)
++++|+|+|..+. .+....+||..|||||++.+..
T Consensus 326 -------------------------------------------vRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~ 362 (591)
T KOG0986|consen 326 -------------------------------------------VRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEV 362 (591)
T ss_pred -------------------------------------------eEeeccceEEecCCCCccccccCcccccCHHHHcCCc
Confidence 9999999998763 4566679999999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|+.+.|.|||||++|+|+.|+.||.....+.- -.++
T Consensus 363 Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk------~eEv-------------------------------------- 398 (591)
T KOG0986|consen 363 YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK------REEV-------------------------------------- 398 (591)
T ss_pred ccCCccHHHHHhHHHHHHcccCchhhhhhhhh------HHHH--------------------------------------
Confidence 99999999999999999999999975543221 0011
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
-+.++....+++...++++.++.+.+|+.||++|+. ++++-+||||+++
T Consensus 399 drr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 399 DRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 112333444567788999999999999999999985 6799999999985
No 168
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.3e-38 Score=299.42 Aligned_cols=284 Identities=24% Similarity=0.384 Sum_probs=202.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.+|++.+.||.|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l--------------~h~~i~~~~~ 69 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL--------------DHDNIVKVYE 69 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc--------------CCCcchhhHh
Confidence 469999999999999999999999999999999876433 2335577899999999 7888888887
Q ss_pred cceeecC----------CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 106 DFKIYSR----------NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 106 ~~~~~~~----------~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
.+..... .....++||||+++++.+.+... .+++..++.++.|++.||.|||+. |++||||||+||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~-givH~dikp~Ni 145 (342)
T cd07854 70 VLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANV 145 (342)
T ss_pred hhcccccccccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHE
Confidence 7653221 12368999999988888777543 488999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQ 249 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~ 249 (393)
+++.++. .++++|||.+...... .....++..
T Consensus 146 li~~~~~------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 183 (342)
T cd07854 146 FINTEDL------------------------------------------VLKIGDFGLARIVDPHYSHKGYLSEGLVTKW 183 (342)
T ss_pred EEcCCCc------------------------------------------eEEECCcccceecCCcccccccccccccccc
Confidence 9974432 4899999998754321 122356888
Q ss_pred CchhHHHhc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 250 YRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 250 y~aPE~~~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|+|||.+.. ..++.++|||||||++|+|++|+.||.... .......+......................
T Consensus 184 y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 253 (342)
T cd07854 184 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAH------ELEQMQLILESVPVVREEDRNELLNVIPSF---- 253 (342)
T ss_pred ccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCChHHhhhhhhhhhhh----
Confidence 999998765 457889999999999999999999997554 222222222221111111110000000000
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
........... ...+....+..+.+||++||+.||.+|||+.|++.||||+.
T Consensus 254 -~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 254 -VRNDGGEPRRP-------LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred -hhhcccccCCC-------HHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 00000000000 00011235567889999999999999999999999999974
No 169
>KOG2345|consensus
Probab=100.00 E-value=2.5e-39 Score=273.53 Aligned_cols=255 Identities=25% Similarity=0.281 Sum_probs=199.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.||++.+.||+|||+.||++.+..++..+|+|.+.... ...+...+|++..+.+ .|||++++++
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf--------------~s~~vl~l~d 85 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKF--------------NSPNVLRLVD 85 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhh--------------CCcchHHHHH
Confidence 479999999999999999999999999999999876443 4567788999999999 8899999888
Q ss_pred cceeecC-CCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCceEEee
Q psy12288 106 DFKIYSR-NGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENILMCV 179 (393)
Q Consensus 106 ~~~~~~~-~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NIl~~~ 179 (393)
.-..... .....|++++|. .|++++.+.... +..+++.++..++.++++||++||+. . ++||||||.|||+..
T Consensus 86 h~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~ 164 (302)
T KOG2345|consen 86 HQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSD 164 (302)
T ss_pred HHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecC
Confidence 7654433 345689999998 899999886644 23489999999999999999999998 7 999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------------CCCCCCC
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------------FADEIQT 247 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------------~~~~~~t 247 (393)
++ .+++.|||.+...... ......|
T Consensus 165 ~~-------------------------------------------~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct 201 (302)
T KOG2345|consen 165 SG-------------------------------------------LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCT 201 (302)
T ss_pred CC-------------------------------------------ceEEEeccCccccceEeechHHHHHHHHHHHHhCC
Confidence 65 3899999998765322 1223558
Q ss_pred CCCchhHHHhcC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 248 RQYRSVEVLIGA---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 248 ~~y~aPE~~~~~---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
..|+|||.+.-. ..+.++|||||||++|.|+.|..||...-. -.|.+.- ...
T Consensus 202 ~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---------------~GgSlaL----------Av~ 256 (302)
T KOG2345|consen 202 IPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---------------QGGSLAL----------AVQ 256 (302)
T ss_pred CcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---------------cCCeEEE----------eee
Confidence 999999998753 468999999999999999999999953221 1111110 000
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+..- ..+-.+..+..+.++|+.||..||.+||++.+++.+
T Consensus 257 n~q~-------------------s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 257 NAQI-------------------SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred cccc-------------------ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 0000 001113478899999999999999999999999865
No 170
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.2e-38 Score=300.00 Aligned_cols=283 Identities=30% Similarity=0.459 Sum_probs=219.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.||||.+... ....+.+.+|+.+++.+ .|++++++.+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL--------------RHENIIGLLD 66 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc--------------CCcchhhhhh
Confidence 699999999999999999999999999999988753 23346788899999998 7899999999
Q ss_pred cceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+.... ......+++|+|+++++.+.+.... .+++..+..++.|++.||++||+. |++|+||||+||+++.++
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~-gi~H~dlkp~nili~~~~--- 140 (330)
T cd07834 67 ILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA-NVIHRDLKPSNILVNSNC--- 140 (330)
T ss_pred hhcccCcccccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCC---
Confidence 887432 1224789999999888888876543 589999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||.+...... .....++..|+|||.+.+
T Consensus 141 ----------------------------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 180 (330)
T cd07834 141 ----------------------------------------DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLS 180 (330)
T ss_pred ----------------------------------------CEEEcccCceEeecccccccccccccccccCcCCceeeec
Confidence 4999999988765432 233467889999999988
Q ss_pred C-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc--ccccccCCCCCeeeccC
Q psy12288 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK--KTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 259 ~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 335 (393)
. .++.++|+||||+++|+|++|.+||.+.+ .......+....+..+...+.... ....+... ...
T Consensus 181 ~~~~~~~sDi~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 248 (330)
T cd07834 181 SSRYTKAIDIWSVGCIFAELLTRKPLFPGRD------YIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKS------LPK 248 (330)
T ss_pred ccCCCcchhHHHHHHHHHHHHcCCCCcCCCC------HHHHHHHHHHhcCCCChhHhhhccccchhhHHhh------ccc
Confidence 7 78999999999999999999999998766 455667777777776665443211 00000000 000
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..... .. ......+..+.++|++||..||.+|||+++++.||||++..
T Consensus 249 ~~~~~----~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 249 KPKKP----LS---KLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred CCcch----hH---HhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 00000 00 01123567889999999999999999999999999998765
No 171
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.6e-38 Score=289.43 Aligned_cols=277 Identities=29% Similarity=0.488 Sum_probs=209.8
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+|++.++||.|++|.||+|.+..+++.||||.+.... .....+.+|+.+++.+ .|+|++++++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~~ 66 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL--------------KHENIVRLHDV 66 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh--------------cCCCEeeeeee
Confidence 5899999999999999999999999999999887542 2235567899999998 78999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSD-YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. ..+..++||||+.+++.+++.... ...+++..+..++.|++.||+|||+. |++|+||+|+||+++.++
T Consensus 67 ~~----~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~h~dl~p~ni~~~~~~---- 137 (284)
T cd07836 67 IH----TENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-RVLHRDLKPQNLLINKRG---- 137 (284)
T ss_pred Ee----eCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCC----
Confidence 87 556789999999888888876533 23488999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++...... .....++..|++||.+.+. .+
T Consensus 138 ---------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 178 (284)
T cd07836 138 ---------------------------------------ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTY 178 (284)
T ss_pred ---------------------------------------cEEEeecchhhhhcCCccccccccccccccChHHhcCCCCC
Confidence 4999999988754332 2234568889999998764 46
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|+.||.+.+ ..+....+....+......+........+ . ...+...
T Consensus 179 ~~~~Dv~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~---- 242 (284)
T cd07836 179 STSIDIWSVGCIMAEMITGRPLFPGTN------NEDQLLKIFRIMGTPTESTWPGISQLPEY-K-----PTFPRYP---- 242 (284)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCChhhHHHHhcCchh-c-----ccccCCC----
Confidence 889999999999999999999997655 34455555555444333332222111000 0 0000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... +....+..+.+++.+||..||.+||++.|+++||||
T Consensus 243 ~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 243 PQDLQQ---LFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hHHHHH---HhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 011111 112346778899999999999999999999999998
No 172
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=6.1e-38 Score=296.83 Aligned_cols=282 Identities=30% Similarity=0.436 Sum_probs=216.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|++.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|+++
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l--------------~h~~iv~ 80 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM--------------KHENVIG 80 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc--------------CCCcccc
Confidence 4579999999999999999999999999999999886432 1235567899999998 8899999
Q ss_pred ccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+.+.+.... ......+++++++++++.+.+... .+++..+..++.|++.||+|||+. |++|+||||+||+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 81 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNED 156 (345)
T ss_pred eeeeeeecccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEcCC
Confidence 988775322 123457899999998988776543 488999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-C
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-A 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~ 259 (393)
+ .++|+|||++...........++..|+|||.+.+ .
T Consensus 157 ~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 193 (345)
T cd07877 157 C-------------------------------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 193 (345)
T ss_pred C-------------------------------------------CEEEecccccccccccccccccCCCccCHHHHhCcc
Confidence 6 4999999998876555555677899999999877 4
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+|||||++|+|++|+.||.... ....+..+....+..+............ +
T Consensus 194 ~~~~~~DvwslG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 251 (345)
T cd07877 194 HYNQTVDIWSVGCIMAELLTGRTLFPGTD------HIDQLKLILRLVGTPGAELLKKISSESA----------------R 251 (345)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHhhcccHhH----------------H
Confidence 57889999999999999999999997544 4455666666666666655433211100 0
Q ss_pred hhHHHHhhh--c---cCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEK--Y---HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~--~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....+... . ......+..+.++|.+||..||.+||++.++++||||++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~ 307 (345)
T cd07877 252 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 307 (345)
T ss_pred HHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcC
Confidence 000000000 0 00012456788999999999999999999999999998654
No 173
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.7e-38 Score=288.04 Aligned_cols=255 Identities=28% Similarity=0.391 Sum_probs=200.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||.|++|.||+|....++..+++|++.... ...+.+.+|+.+++.+ .|++++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC--------------NHPNVVKYYT 66 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc--------------CCCCEEEEEE
Confidence 47999999999999999999999899999999986432 2346678899999888 7899999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+. .+...+++||++ ++++.+.+..... ..+++..+..++.|++.||++||++ |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-~i~h~~l~p~ni~~~~~~-- 139 (267)
T cd06610 67 SFV----VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-GQIHRDIKAGNILLGEDG-- 139 (267)
T ss_pred EEe----eCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCC--
Confidence 776 566799999999 7788888765432 4588999999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-------CCCCCCCCCchhHHH
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-------ADEIQTRQYRSVEVL 256 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-------~~~~~t~~y~aPE~~ 256 (393)
.++|+|||++....... ....++..|++||.+
T Consensus 140 -----------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~ 178 (267)
T cd06610 140 -----------------------------------------SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM 178 (267)
T ss_pred -----------------------------------------CEEEcccchHHHhccCccccccccccccCChhhcChHHH
Confidence 49999999886554321 223578899999999
Q ss_pred hcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
... .++.++|+||||+++|+|++|+.||...+... .+. ......+... ..
T Consensus 179 ~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~---~~~~~~~~~~-----------~~--------- 229 (267)
T cd06610 179 EQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK------VLM---LTLQNDPPSL-----------ET--------- 229 (267)
T ss_pred ccccCcCcccchHhHhHHHHHHHhCCCCccccChhh------hHH---HHhcCCCCCc-----------CC---------
Confidence 877 68999999999999999999999997554221 111 1111100000 00
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.......+..+.+++.+||..||++|||+.++++||||
T Consensus 230 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 230 -------------GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred -------------ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 00012456788899999999999999999999999998
No 174
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.1e-38 Score=288.75 Aligned_cols=257 Identities=24% Similarity=0.377 Sum_probs=202.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|++|.||+|.+..+++.+++|++.......+.+.+|+.+++.+. .|+|++++++.+
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~-------------~h~~i~~~~~~~ 72 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS-------------NHPNIATFYGAF 72 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc-------------CCCChheEEEEE
Confidence 5899999999999999999999989999999998876555677889999999873 689999999988
Q ss_pred eeec--CCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 108 KIYS--RNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 108 ~~~~--~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.... ..+..++++|||+ +++|.+.+.... ...++...+..++.|++.||+|||++ +++|+||+|+||+++.++
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~~l~p~ni~~~~~~- 150 (275)
T cd06608 73 IKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN-KVIHRDIKGQNILLTKNA- 150 (275)
T ss_pred EecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEEccCC-
Confidence 7544 2466799999999 567777765432 34588999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||.+...... .....++..|+|||.+...
T Consensus 151 ------------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 188 (275)
T cd06608 151 ------------------------------------------EVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACD 188 (275)
T ss_pred ------------------------------------------eEEECCCccceecccchhhhcCccccccccCHhHhccc
Confidence 4999999987654322 2334578899999998643
Q ss_pred -----CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 260 -----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 260 -----~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.++.++||||||+++|+|++|+.||..... ...+..+.. +..+
T Consensus 189 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~--~~~~------------------------ 236 (275)
T cd06608 189 EQPDASYDARSDVWSLGITAIELADGKPPLCDMHP------MRALFKIPR--NPPP------------------------ 236 (275)
T ss_pred ccccCCccccccHHHhHHHHHHHHhCCCCccccch------HHHHHHhhc--cCCC------------------------
Confidence 367889999999999999999999964331 111111110 0000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....+...+..+.++|.+||..||++|||+.|+++|||+
T Consensus 237 -------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 -------------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred -------------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 000112345678899999999999999999999999996
No 175
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=7e-38 Score=291.90 Aligned_cols=283 Identities=29% Similarity=0.398 Sum_probs=209.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.++|++.++||+|++|.||+|.+..+++.+|+|.+.... .......+|+.+++.+ .|+|++++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 72 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL--------------KHPNVVPL 72 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc--------------CCCCccch
Confidence 568999999999999999999999999999999876432 1234567899999998 78899998
Q ss_pred cccceeecC----CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 104 LNDFKIYSR----NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 104 ~~~~~~~~~----~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
++.+..... ....+++|+||+++++...+.... ..+++..+..++.|++.||+|||++ |++|+||||+||+++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~-~i~H~dl~p~nil~~~ 150 (311)
T cd07866 73 IDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILIDN 150 (311)
T ss_pred hhheecccccccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECC
Confidence 887754321 245689999999888887776532 4589999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--------------CCCC
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--------------ADEI 245 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--------------~~~~ 245 (393)
++ .++|+|||++....... ....
T Consensus 151 ~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (311)
T cd07866 151 QG-------------------------------------------ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLV 187 (311)
T ss_pred CC-------------------------------------------CEEECcCccchhccCCCcccccCCcccccccccce
Confidence 76 49999999887543211 1124
Q ss_pred CCCCCchhHHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 246 QTRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 246 ~t~~y~aPE~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
+++.|+|||.+.+. .++.++||||||+++|+|++|++||.+.+ .......+....+..+...+..........
T Consensus 188 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (311)
T cd07866 188 VTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS------DIDQLHLIFKLCGTPTEETWPGWRSLPGCE 261 (311)
T ss_pred eccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhchhhhhccccc
Confidence 57789999998764 47899999999999999999999997655 445556666666654443322111110000
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
. . ......+.. ..... ...+..+.++|++||..||.+|||+.|++.||||
T Consensus 262 ~----~-~~~~~~~~~----~~~~~---~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 262 G----V-HSFTNYPRT----LEERF---GKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred c----c-ccCCCCCcc----HHHHc---ccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 0 0 000000000 00000 1233678899999999999999999999999998
No 176
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.7e-38 Score=292.21 Aligned_cols=255 Identities=25% Similarity=0.365 Sum_probs=199.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
-|++.++||+|+||.||+|.+..++..+++|.+.... ...+.+.+|+.+++.+ .|+|++++++.+
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~ii~~~~~~ 71 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC--------------DHPNIVKLLDAF 71 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC--------------CCCCeeeEEEEE
Confidence 4788899999999999999999999999999886432 2345677899999998 899999999888
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+...++|+||+ ++++...+... ...+++..+..++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 72 ~----~~~~~~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~-~i~H~dlkp~nili~~~~----- 140 (282)
T cd06643 72 Y----YENNLWILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILFTLDG----- 140 (282)
T ss_pred e----eCCEEEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEccCC-----
Confidence 6 556799999999 55665555432 24588999999999999999999998 999999999999997766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh-----c
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI-----G 258 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~-----~ 258 (393)
.++++|||++...... .....++..|+|||++. +
T Consensus 141 --------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 182 (282)
T cd06643 141 --------------------------------------DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 182 (282)
T ss_pred --------------------------------------CEEEccccccccccccccccccccccccccCHhhccccCCCC
Confidence 4999999988654322 23346788999999984 3
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|+||+||++|+|++|..||...+. ......+.....+
T Consensus 183 ~~~~~~~Dv~slGvil~el~~g~~p~~~~~~------~~~~~~~~~~~~~------------------------------ 226 (282)
T cd06643 183 RPYDYKADVWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSEPP------------------------------ 226 (282)
T ss_pred CCCCccchhhhHHHHHHHHccCCCCccccCH------HHHHHHHhhcCCC------------------------------
Confidence 3467899999999999999999999965441 1111111111000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....+...+..+.++|++||..||.+||++.++++||||+....
T Consensus 227 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 227 ---------TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred ---------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence 00112234567889999999999999999999999999987654
No 177
>KOG0574|consensus
Probab=100.00 E-value=1.9e-41 Score=293.68 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=209.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
+-|+++++||+|+||.||+|.++.+|..+|||.+..+. ..+.+.+|+.+++.+ ..+.++++++.+
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQEIIKEISIMQQC--------------~S~yVVKYYGSY 97 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-DLQEIIKEISIMQQC--------------KSKYVVKYYGSY 97 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-hHHHHHHHHHHHHHc--------------CCchhhhhhhhh
Confidence 35889999999999999999999999999999887543 568889999999999 889999999999
Q ss_pred eeecCCCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+.-+|||||||| |++.+.+.. ...+++++++..+++.-++||+|||.. .-+|||||..|||++.++
T Consensus 98 F----K~sDLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT~G----- 166 (502)
T KOG0574|consen 98 F----KHSDLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNTDG----- 166 (502)
T ss_pred c----cCCceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEcccc-----
Confidence 8 6667999999995 566655544 446799999999999999999999987 999999999999998887
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
..||.|||.+..+... ....+||+.|||||++..-+|..
T Consensus 167 --------------------------------------~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~ 208 (502)
T KOG0574|consen 167 --------------------------------------IAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDT 208 (502)
T ss_pred --------------------------------------hhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccch
Confidence 4899999999877543 34567999999999999999999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++||||||++..||..|++||.+.-++.. +.-+....|+
T Consensus 209 ~ADIWSLGITaIEMAEG~PPYsDIHPMRA---------IFMIPT~PPP-------------------------------- 247 (502)
T KOG0574|consen 209 KADIWSLGITAIEMAEGRPPYSDIHPMRA---------IFMIPTKPPP-------------------------------- 247 (502)
T ss_pred hhhHhhhcchhhhhhcCCCCcccccccce---------eEeccCCCCC--------------------------------
Confidence 99999999999999999999965543210 1000011111
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+.-+..-+.+|.||+++||..+|++|-||-++++|||+++-
T Consensus 248 ----TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 248 ----TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred ----CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 111123456789999999999999999999999999999874
No 178
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.3e-38 Score=290.69 Aligned_cols=279 Identities=28% Similarity=0.446 Sum_probs=206.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.++||+|+||.||+|.+..+++.||+|.+..... ..+.+.+|+.+++.+ .|+|+++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~ 66 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL--------------RHENLVNLI 66 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc--------------CCcchhhHH
Confidence 479999999999999999999999999999998764322 234567899999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+...++||||+.++++..+.... ..++..++..++.|++.||+|||+. +++|+||+|+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~h~~l~p~ni~~~~~~--- 137 (286)
T cd07846 67 EVFR----RKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILVSQSG--- 137 (286)
T ss_pred Hhcc----cCCeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCC---
Confidence 9886 667899999999666555554433 3488999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-C
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~ 260 (393)
.++|+|||++...... .....++..|+|||.+.+. .
T Consensus 138 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 177 (286)
T cd07846 138 ----------------------------------------VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTK 177 (286)
T ss_pred ----------------------------------------cEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccc
Confidence 4999999988754322 2234578899999998764 4
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++||||||+++|+|++|++||...+ ..+....+....+..+.......... ..... ...+.....
T Consensus 178 ~~~~~Dv~slG~~l~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~- 245 (286)
T cd07846 178 YGRAVDIWAVGCLVTEMLTGEPLFPGDS------DIDQLYHIIKCLGNLIPRHQEIFQKN-PLFAG----MRLPEVKEI- 245 (286)
T ss_pred cCchHhHHHHHHHHHHHHcCCCCCCCCc------hHHHHHHHHHHhCCCchhhHHHhccc-hHhhc----cccccccCc-
Confidence 6889999999999999999999997554 34455555555555433211100000 00000 000000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..........+..+.+++.+||..||.+||++.++++||||
T Consensus 246 -----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 246 -----EPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred -----chHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 00000112456788999999999999999999999999998
No 179
>KOG0669|consensus
Probab=100.00 E-value=1.1e-40 Score=282.45 Aligned_cols=289 Identities=25% Similarity=0.432 Sum_probs=228.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEe---cccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
..|.-..+||+|+||.||+|+...+++.||+|..- ..........+|+.+|..+ .|+|++.++
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~l--------------kHenv~nli 82 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLL--------------KHENVVNLI 82 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHh--------------cchhHHHHH
Confidence 47888999999999999999999999999988543 2455667788999999999 677777776
Q ss_pred ccceeecC----CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 105 NDFKIYSR----NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 105 ~~~~~~~~----~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
..+..... ....+++||.+|..+|.-++.... ..++..++.++|.+++.||.|+|.+ .|+|||+|++|+|++.|
T Consensus 83 Eic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~-kilHRDmKaaNvLIt~d 160 (376)
T KOG0669|consen 83 EICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRN-KILHRDMKAANVLITKD 160 (376)
T ss_pred HHHhhccCCcccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHh-hHHhhcccHhhEEEcCC
Confidence 66654322 334589999999999998887654 4589999999999999999999988 99999999999999988
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSV 253 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aP 253 (393)
+ .++|+|||+++.+..+ ..+++-|.+|++|
T Consensus 161 g-------------------------------------------ilklADFGlar~fs~~~n~~kprytnrvvTLwYrpp 197 (376)
T KOG0669|consen 161 G-------------------------------------------ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPP 197 (376)
T ss_pred c-------------------------------------------eEEeeccccccceecccccCCCCcccceeeeecCCH
Confidence 8 5999999999766432 2334558999999
Q ss_pred HHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|.+.+- .++++.|||..||++.+|+++.+.+.+.+ ...++.-|..+.|.+..++|....+..-+ ..-.
T Consensus 198 EllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnt------eqqql~~Is~LcGs~tkevWP~~d~lpL~-----~sie 266 (376)
T KOG0669|consen 198 ELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNT------EQQQLHLISQLCGSITKEVWPNVDNLPLY-----QSIE 266 (376)
T ss_pred HHhhcccccCCcchhHhHHHHHHHHHccCccccCCh------HHHHHHHHHHHhccCCcccCCCcccchHH-----Hhcc
Confidence 999985 58999999999999999999999999888 77889999999999988887765443211 1111
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.++....+.+.+-....++. ..+...+|+.++|..||.+|++++++++|.||..
T Consensus 267 ~ePl~~~~~rkv~n~~kp~~--kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 267 LEPLPKGQKRKVKNRLKPYV--KDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CCCCCcchhhhhhhhccccc--CChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 12222222222222222222 2457789999999999999999999999999975
No 180
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.7e-38 Score=298.12 Aligned_cols=280 Identities=30% Similarity=0.452 Sum_probs=211.9
Q ss_pred eCCeEEE-EEEecccCceEEEEEEeCCCCceEEEEEEecccccc---------------hhhHHHHHHHHHhcccCCCCc
Q psy12288 26 FNFRYHV-IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA---------------DTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 26 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------~~~~~E~~~l~~l~~~~~~~~ 89 (393)
+.++|.. .+.||+|+||.||+|.+..+++.||+|.+....... ..+.+|+.+++.+
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------- 77 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-------- 77 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC--------
Confidence 4568875 567999999999999999999999999886432221 1356899999998
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
.|+|++++++.+. .+.+.+++||++.+++.+.+... ..++...+..++.|++.||++||+. |++|+|
T Consensus 78 ------~h~~iv~~~~~~~----~~~~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~-~i~H~d 144 (335)
T PTZ00024 78 ------KHENIMGLVDVYV----EGDFINLVMDIMASDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKW-YFMHRD 144 (335)
T ss_pred ------CCcceeeeeEEEe----cCCcEEEEEeccccCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-Ceeccc
Confidence 8899999999886 56789999999988999888654 3488999999999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----------
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---------- 239 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---------- 239 (393)
|+|+||+++.++ .++|+|||.+.....
T Consensus 145 l~~~nill~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~ 181 (335)
T PTZ00024 145 LSPANIFINSKG-------------------------------------------ICKIADFGLARRYGYPPYSDTLSKD 181 (335)
T ss_pred ccHHHeEECCCC-------------------------------------------CEEECCccceeeccccccccccccc
Confidence 999999997766 499999998865441
Q ss_pred -------CCCCCCCCCCCchhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh
Q psy12288 240 -------HFADEIQTRQYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311 (393)
Q Consensus 240 -------~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~ 311 (393)
......++..|+|||.+.+.. ++.++|+|||||++|+|++|..||.+.+ ..+.+..+....+..+.
T Consensus 182 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~------~~~~~~~i~~~~~~~~~ 255 (335)
T PTZ00024 182 ETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN------EIDQLGRIFELLGTPNE 255 (335)
T ss_pred ccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCch
Confidence 111234577899999987653 6899999999999999999999997665 45666777776665544
Q ss_pred HHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 312 EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..+....... .+.+ .....+..... .....+..+.++|.+||..||++|||++|++.||||+..
T Consensus 256 ~~~~~~~~~~-~~~~------~~~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 256 DNWPQAKKLP-LYTE------FTPRKPKDLKT-------IFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred hhCcchhhcc-cccc------cCcCCcccHHH-------hCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 3222111100 0000 00000000000 112345678899999999999999999999999999864
No 181
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3e-38 Score=290.52 Aligned_cols=256 Identities=23% Similarity=0.385 Sum_probs=197.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHH-HHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVL-LKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~-l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .......|+.. ++.+ .|+|+++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~--------------~~~~iv~~~ 66 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSV--------------DCPYTVTFY 66 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHc--------------CCCCeeeee
Confidence 479999999999999999999999999999998875422 12334445554 3433 789999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+. .+...+++|||+++++.+++... ....+++..+..++.|++.||+|||++++++||||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~- 141 (283)
T cd06617 67 GALF----REGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG- 141 (283)
T ss_pred EEEe----cCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC-
Confidence 9886 55679999999988887776542 2245889999999999999999999866899999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCCCCCCCchhHHHhc--
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYRSVEVLIG-- 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~t~~y~aPE~~~~-- 258 (393)
.++|+|||++....... ....++..|+|||.+.+
T Consensus 142 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 179 (283)
T cd06617 142 ------------------------------------------QVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPEL 179 (283)
T ss_pred ------------------------------------------CEEEeecccccccccccccccccCCccccChhhcCCcc
Confidence 49999999987653322 23467889999999865
Q ss_pred --CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 259 --AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 259 --~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
..++.++|+|||||++|+|++|+.||..... ....+..... +..+.
T Consensus 180 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~--~~~~~------------------------- 227 (283)
T cd06617 180 NQKGYDVKSDVWSLGITMIELATGRFPYDSWKT-----PFQQLKQVVE--EPSPQ------------------------- 227 (283)
T ss_pred cccccCccccchhhHHHHHHHHhCCCCCCcccc-----CHHHHHHHHh--cCCCC-------------------------
Confidence 3468899999999999999999999954221 1112211111 11000
Q ss_pred CcchhHHHHhhhccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
++ ...+..+.++|.+||..+|.+||+++++++||||....
T Consensus 228 --------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 228 --------------LPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred --------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 00 22456788999999999999999999999999998765
No 182
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.6e-38 Score=296.20 Aligned_cols=285 Identities=25% Similarity=0.407 Sum_probs=215.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCC--CceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQD--KTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+|++.+.||+|+||.||+|.+..+ +..||+|.+.... ...+.+.+|+.+++.+. .|+|++++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~~iv~~ 67 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR-------------GHKNITCL 67 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc-------------CCCChhee
Confidence 589999999999999999999888 8899999876422 12345677888888872 58899999
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++...........+++++++++++|...+... ..+++..++.++.|++.||++||++ |++|+||||+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-givH~dlkp~Nili~~~~-- 142 (332)
T cd07857 68 YDMDIVFPGNFNELYLYEELMEADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSA-NVLHRDLKPGNLLVNADC-- 142 (332)
T ss_pred eeeeeeccccCCcEEEEEecccCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHeEEcCCC--
Confidence 88765443344568899999998998888654 3588999999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHH
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVL 256 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~ 256 (393)
.++|+|||++...... .....+|..|+|||++
T Consensus 143 -----------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~ 181 (332)
T cd07857 143 -----------------------------------------ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIM 181 (332)
T ss_pred -----------------------------------------CEEeCcCCCceecccccccccccccCcccCccccCcHHH
Confidence 4999999998754321 1224678899999998
Q ss_pred hc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc-ccCCCCCeeecc
Q psy12288 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR-YFTPQGNFRRID 334 (393)
Q Consensus 257 ~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~ 334 (393)
.+ ..++.++|+||+|+++|+|++|++||...+ ....+..+....|..+.+.......... .+.. ...
T Consensus 182 ~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 250 (332)
T cd07857 182 LSFQSYTKAIDVWSVGCILAELLGRKPVFKGKD------YVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR-----SLP 250 (332)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHH-----hcc
Confidence 76 467999999999999999999999997655 5567778888888766544332211100 0000 000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...... ........+..+.+++.+||+.||.+|||+.|++.||||+..+
T Consensus 251 ~~~~~~-------~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 251 NIPKKP-------FESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred ccCCcc-------hHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 000000 0001122457888999999999999999999999999998665
No 183
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=6e-38 Score=291.29 Aligned_cols=286 Identities=28% Similarity=0.422 Sum_probs=211.5
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
....++|++.++||+|++|.||+|.+..+++.||+|.++... .....+.+|+.+++.+ .|+|+
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~~i 68 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL--------------NHRNI 68 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC--------------CCCCe
Confidence 344578999999999999999999999999999999987432 2234567899999998 78999
Q ss_pred eeccccceeec------CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 101 IRLLNDFKIYS------RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 101 ~~~~~~~~~~~------~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
+++.+.+.... ..+..+++++||+++++...+... ...++...+..++.|++.||+|||+. |++|+||+|+|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~n 146 (302)
T cd07864 69 VNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSN 146 (302)
T ss_pred eeeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHH
Confidence 99888775322 123479999999988888877654 24589999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCC
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQY 250 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y 250 (393)
|+++.++ .++|+|||.+....... ....++..|
T Consensus 147 ili~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y 183 (302)
T cd07864 147 ILLNNKG-------------------------------------------QIKLADFGLARLYNSEESRPYTNKVITLWY 183 (302)
T ss_pred EEECCCC-------------------------------------------cEEeCcccccccccCCcccccccceeccCc
Confidence 9998766 49999999887553221 223457789
Q ss_pred chhHHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 251 RSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 251 ~aPE~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
+|||.+.+. .++.++|||||||++|+|++|++||...+ ....+..+.+..+..+...+........+......
T Consensus 184 ~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T cd07864 184 RPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ------ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPK 257 (302)
T ss_pred cChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChhhcccccccccccccccc
Confidence 999998754 46889999999999999999999997654 45566666666555444332211111100000000
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
. . ..+ ..... ....+..+.+++.+||..||.+|||+.++++||||
T Consensus 258 ~-~----~~~---~~~~~----~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 258 K-Q----YRR---RLREE----FSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred c-c----ccc---chhhh----cCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 0 0 000 00000 11235678899999999999999999999999997
No 184
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=5.3e-38 Score=284.61 Aligned_cols=249 Identities=21% Similarity=0.364 Sum_probs=201.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|+||.||++.+..+++.|++|.+... ......+.+|+.+++.+ .|+|++++.+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM--------------KHPNIVQYQE 66 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC--------------CCCCeeeeEe
Confidence 599999999999999999999999999999988643 22335678899999998 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ..++.++||||+ ++++.+.+.......++...+..++.|++.|+++||++ +++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~l~~~nil~~~~~--- 138 (256)
T cd08218 67 SFE----ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDG--- 138 (256)
T ss_pred eec----CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCC---
Confidence 886 667899999999 77888888665444578899999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||++....... ....+++.|+|||++.+..+
T Consensus 139 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~ 178 (256)
T cd08218 139 ----------------------------------------TIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPY 178 (256)
T ss_pred ----------------------------------------CEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCC
Confidence 49999999887553321 22357888999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++++|++|+.||.... ..+.+..+ ..+..+
T Consensus 179 ~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~--~~~~~~------------------------------- 219 (256)
T cd08218 179 NNKSDIWALGCVLYEMCTLKHAFEAGN------MKNLVLKI--IRGSYP------------------------------- 219 (256)
T ss_pred CCccchhHHHHHHHHHHcCCCCccCCC------HHHHHHHH--hcCCCC-------------------------------
Confidence 999999999999999999999996432 11111111 111111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..+...+..+.++|.+||..+|.+||++.++++||||
T Consensus 220 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 220 --------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred --------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 1123456678899999999999999999999999998
No 185
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=8.5e-38 Score=293.74 Aligned_cols=282 Identities=30% Similarity=0.482 Sum_probs=218.6
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++++|++.+.||.|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+ .|+|+++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~ 73 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL--------------RHENIIS 73 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc--------------CCCCeee
Confidence 467999999999999999999999999999999987532 22345677899999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+.+.. .+...++++|++++++...+.. ..++...+..++.|++.||++||+. +++|+||+|+||+++.++
T Consensus 74 ~~~~~~~---~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~-~iiH~dl~p~Nili~~~~- 145 (328)
T cd07856 74 LSDIFIS---PLEDIYFVTELLGTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILINENC- 145 (328)
T ss_pred EeeeEec---CCCcEEEEeehhccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEeECCCC-
Confidence 9988752 3456889999998888777654 2378888899999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-CCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGY 261 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~ 261 (393)
.++|+|||.+...........++..|+|||.+.+ ..+
T Consensus 146 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 183 (328)
T cd07856 146 ------------------------------------------DLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKY 183 (328)
T ss_pred ------------------------------------------CEEeCccccccccCCCcCCCcccccccCceeeeccCCc
Confidence 4999999998766554445567889999998766 467
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc--ccccCCCCCeeeccCCCcc
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT--LRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 339 (393)
+.++|+||||+++|+|++|+.||.... .......+.+..|..|.++....... .+++.. .....+.
T Consensus 184 ~~~~Dv~slG~il~el~tg~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 251 (328)
T cd07856 184 DVEVDIWSAGCIFAEMLEGKPLFPGKD------HVNQFSIITDLLGTPPDDVINTICSENTLRFVQS------LPKREPV 251 (328)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhh------ccccCCC
Confidence 999999999999999999999997554 45566677788888887775532211 000000 0000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
... ......+..+.++|++||+.+|++|||+++++.||||...+
T Consensus 252 ~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~ 295 (328)
T cd07856 252 PFS-------EKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYH 295 (328)
T ss_pred cHH-------HHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccccc
Confidence 000 00123457889999999999999999999999999997654
No 186
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=8.8e-38 Score=288.77 Aligned_cols=260 Identities=23% Similarity=0.353 Sum_probs=201.1
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.+.||+|+||.||+|.+..+++.+|+|++.........+.+|+.+++.+. .|+|++++++
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~-------------~h~ni~~~~~ 86 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP-------------NHPNVVKFYG 86 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc-------------CCCCeEEEEE
Confidence 457899999999999999999999999999999998765444566778888888873 6899999999
Q ss_pred cceeecC-CCeEEEEEEeec-cccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 106 DFKIYSR-NGTHICMVFEVM-GYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 106 ~~~~~~~-~~~~~~iv~e~~-~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
.+..... .+...++||||+ +++|.+++.. .....+++..++.++.|++.||++||+. +++|+||||+||+++.++
T Consensus 87 ~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCC
Confidence 8875432 345789999999 6788776643 1224588999999999999999999998 999999999999997766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++...... .....++..|+|||.+..
T Consensus 166 -------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 202 (291)
T cd06639 166 -------------------------------------------GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIAC 202 (291)
T ss_pred -------------------------------------------CEEEeecccchhcccccccccCccCCccccChhhhcC
Confidence 4999999988754321 223467889999999865
Q ss_pred C-----CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 259 A-----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 259 ~-----~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
. .++.++|+|||||++|+|++|+.||..... ...+..+.. +..+.
T Consensus 203 ~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~------~~~~~~~~~--~~~~~---------------------- 252 (291)
T cd06639 203 EQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP------VKTLFKIPR--NPPPT---------------------- 252 (291)
T ss_pred CCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH------HHHHHHHhc--CCCCC----------------------
Confidence 3 257899999999999999999999964331 111111110 11000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
...+...+..+.++|.+||..||++||++.|+++||||+
T Consensus 253 ---------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 253 ---------------LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred ---------------CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 001123345688999999999999999999999999995
No 187
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=8.1e-39 Score=293.96 Aligned_cols=256 Identities=26% Similarity=0.377 Sum_probs=201.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
++|++.++||.|++|.||+|.+..++..+|+|.+.... ...+.+..|+.+++.+ .|++++++++.
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~ 70 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC--------------KHPNIVGLYEA 70 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC--------------CCCceeEEEEE
Confidence 57999999999999999999999899999999886432 2345677899999998 79999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+...++||||+ ++++.+.+.... ..+++..++.++.|++.||.|||++ +++|+||+|+||+++.++
T Consensus 71 ~~----~~~~~~lv~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~nili~~~~---- 140 (280)
T cd06611 71 YF----YENKLWILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDG---- 140 (280)
T ss_pred Ee----cCCeEEEEeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEECCCC----
Confidence 87 567899999999 667776665432 4589999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc----
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG---- 258 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~---- 258 (393)
.++|+|||++...... .....++..|++||.+..
T Consensus 141 ---------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 181 (280)
T cd06611 141 ---------------------------------------DVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFK 181 (280)
T ss_pred ---------------------------------------CEEEccCccchhhcccccccceeecchhhcCHHHHhhcccC
Confidence 4999999987654322 223457889999999863
Q ss_pred -CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 -AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 -~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.+++.++|+||||+++|+|++|+.||...+. ...+..+. .+..|
T Consensus 182 ~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~------~~~~~~~~--~~~~~--------------------------- 226 (280)
T cd06611 182 DNPYDYKADIWSLGITLIELAQMEPPHHELNP------MRVLLKIL--KSEPP--------------------------- 226 (280)
T ss_pred CCCCCccccHHHHHHHHHHHHhCCCCcccCCH------HHHHHHHh--cCCCC---------------------------
Confidence 3467899999999999999999999965431 11111110 01100
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....+...+..+.++|.+||..||.+||++.++++||||++..+
T Consensus 227 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (280)
T cd06611 227 ----------TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSD 270 (280)
T ss_pred ----------CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccch
Confidence 00112334567889999999999999999999999999998654
No 188
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.2e-38 Score=286.23 Aligned_cols=248 Identities=26% Similarity=0.402 Sum_probs=195.9
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+|++.+.||+|+||.||+|.. .+++.+|+|.+..... ....+.+|+.+++.+ .|+|++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~ 65 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL--------------KHVNIV 65 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc--------------CCCCEe
Confidence 488899999999999999976 4788899998764321 124577899999998 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+.+. .....++++||+ +++|.+++.+. ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.+
T Consensus 66 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~ 138 (265)
T cd06631 66 QYLGTCL----DDNTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNN-CVVHRDIKGNNVMLMPN 138 (265)
T ss_pred eEeeEee----cCCeEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHhEEECCC
Confidence 9999887 567899999999 77888777654 3478999999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---------CCCCCCCCCCCc
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---------HFADEIQTRQYR 251 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---------~~~~~~~t~~y~ 251 (393)
+ .++|+|||.+..... ......++..|+
T Consensus 139 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (265)
T cd06631 139 G-------------------------------------------IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWM 175 (265)
T ss_pred C-------------------------------------------eEEeccchhhHhhhhccccccccccccccCCCcccc
Confidence 5 499999998765421 112345788999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||.+.+..++.++|+||||+++|+|++|..||...+. ......+....+..|
T Consensus 176 ~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~--------------------- 228 (265)
T cd06631 176 APEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR------LAAMFYIGAHRGLMP--------------------- 228 (265)
T ss_pred ChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh------HHHHHHhhhccCCCC---------------------
Confidence 99999988889999999999999999999999964321 111111111111111
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.++...+..+.++|++||..+|.+||++.|+++||||
T Consensus 229 ------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 229 ------------------RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ------------------CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 1224456778899999999999999999999999997
No 189
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=7.4e-38 Score=283.47 Aligned_cols=250 Identities=25% Similarity=0.377 Sum_probs=201.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.+|+|.+.... .....+.+|+.+++.+ .|++++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~ 66 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL--------------SHPNIIEYYE 66 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC--------------CCCchhheee
Confidence 5899999999999999999999999999999886432 2245677899999998 7899999888
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++|||++ +++|.+.+.......+++..+..++.|++.|+++||++ |++|+||+|+||+++.++.
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~-- 139 (256)
T cd08220 67 NFL----EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK-LILHRDLKTQNILLDKHKM-- 139 (256)
T ss_pred eEe----cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCC--
Confidence 776 567899999999 77888888765445588999999999999999999998 9999999999999975542
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+...... .....++..|+|||.+.+..++
T Consensus 140 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 179 (256)
T cd08220 140 ----------------------------------------VVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYN 179 (256)
T ss_pred ----------------------------------------EEEEccCCCceecCCCccccccccCCcccCchhccCCCCC
Confidence 4899999998765432 2234678899999999988889
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|+.||...+.. .....+.. +.
T Consensus 180 ~~~Dv~slG~~l~~l~~~~~~~~~~~~~------~~~~~~~~--~~---------------------------------- 217 (256)
T cd08220 180 QKSDIWALGCVLYELASLKRAFEAANLP------ALVLKIMS--GT---------------------------------- 217 (256)
T ss_pred cccchHHHHHHHHHHHhCCCCcccCchH------HHHHHHHh--cC----------------------------------
Confidence 9999999999999999999999654421 11111110 00
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...++...+..+.+++.+||..||.+|||+.|+++||||
T Consensus 218 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 218 -----FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -----CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 001223456678899999999999999999999999997
No 190
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.1e-38 Score=288.96 Aligned_cols=258 Identities=22% Similarity=0.375 Sum_probs=199.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.+.||+|+||.||+|.+..+++.+|+|++.........+.+|+.+++.+. .|+|++++++.
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~-------------~h~~i~~~~~~ 83 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS-------------DHPNVVKFYGM 83 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh-------------cCCCeeeeeee
Confidence 46899999999999999999999999999999988754444466788999888883 58999999987
Q ss_pred ceeec-CCCeEEEEEEeec-cccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 107 FKIYS-RNGTHICMVFEVM-GYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 107 ~~~~~-~~~~~~~iv~e~~-~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.... ..+...++||||+ +++|.+.+.. .....+++..+..++.|++.||.|||+. +++||||||+||+++.++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~- 161 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN-KTIHRDVKGNNILLTTEG- 161 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC-CccccCCCHHhEEECCCC-
Confidence 75332 2456799999999 7788776642 1223478889999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~- 258 (393)
.++|+|||++...... .....++..|+|||++..
T Consensus 162 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 199 (286)
T cd06638 162 ------------------------------------------GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACE 199 (286)
T ss_pred ------------------------------------------CEEEccCCceeecccCCCccccccCCCcccChhhhchh
Confidence 3999999998765322 223468899999999853
Q ss_pred ----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 259 ----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 259 ----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
..++.++|+||+||++|+|++|+.||...... .. ........+.
T Consensus 200 ~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~------~~---~~~~~~~~~~----------------------- 247 (286)
T cd06638 200 QQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM------RA---LFKIPRNPPP----------------------- 247 (286)
T ss_pred hhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh------HH---HhhccccCCC-----------------------
Confidence 34788999999999999999999999654311 11 1010000000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....+...+..+.++|.+||..||.+|||+.|+++|+||
T Consensus 248 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 248 -------------TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred -------------cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 000112234578899999999999999999999999997
No 191
>KOG0607|consensus
Probab=100.00 E-value=5.4e-39 Score=280.46 Aligned_cols=270 Identities=24% Similarity=0.374 Sum_probs=212.9
Q ss_pred eCCeEEEE-EEecccCceEEEEEEeCCCCceEEEEEEeccccc-chhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVI-RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
|.+-|++. +.||+|+|+.|-.|....++..+|||++.+.+.. +.++.+|++++... ++|+||+.+
T Consensus 75 F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C-------------qgh~nilqL 141 (463)
T KOG0607|consen 75 FEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC-------------QGHKNILQL 141 (463)
T ss_pred HHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh-------------cCCccHHHH
Confidence 34456654 4789999999999999999999999999766543 56788999999988 499999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.|. ++..+|+|||-+ ||.++..+.... .|++.++.++..+|+.||.|||.+ ||.||||||+|||-.....
T Consensus 142 iefFE----dd~~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~k-gIAHRDlKPENiLC~~pn~ 214 (463)
T KOG0607|consen 142 IEFFE----DDTRFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTK-GIAHRDLKPENILCESPNK 214 (463)
T ss_pred HHHhc----ccceEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhc-CcccccCCccceeecCCCC
Confidence 99998 778899999999 899999998774 499999999999999999999999 9999999999999754331
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc--c--------CCCCCCCCCCCCch
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--D--------DHFADEIQTRQYRS 252 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~--~--------~~~~~~~~t~~y~a 252 (393)
-..+|+|||.+..-. + ....+.+|+..|||
T Consensus 215 ----------------------------------------vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMA 254 (463)
T KOG0607|consen 215 ----------------------------------------VSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMA 254 (463)
T ss_pred ----------------------------------------cCceeeeccccccccccCCCCCCCCCccccCcccchhhcc
Confidence 013899999765432 1 12334578889999
Q ss_pred hHHHhc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 253 VEVLIG-----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 253 PE~~~~-----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
||+..- ..|..++|.|||||++|-|++|++||.+.-..+..=
T Consensus 255 PEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW--------------------------------- 301 (463)
T KOG0607|consen 255 PEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW--------------------------------- 301 (463)
T ss_pred hhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc---------------------------------
Confidence 999753 247899999999999999999999997665432210
Q ss_pred CCeeeccCCC---cchhHHHHhhhccCCh----hhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 328 GNFRRIDNLK---PWGLYQVLTEKYHWSK----AEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 328 ~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.+...+. ..-+..+...+++||. ..+.+..|+++.+|..||.+|.++.++++|||+..+..
T Consensus 302 ---drGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 302 ---DRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP 369 (463)
T ss_pred ---cCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence 0000000 1112234456666664 46889999999999999999999999999999987753
No 192
>KOG0612|consensus
Probab=100.00 E-value=1.1e-39 Score=324.44 Aligned_cols=252 Identities=23% Similarity=0.396 Sum_probs=212.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec----ccccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS----DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|.++++||+|+||.|.+++++.|++.+|.|++++ ......-|+.|-.+|..- +.+=|+.
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~--------------ns~Wiv~ 139 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG--------------NSEWIVQ 139 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC--------------CcHHHHH
Confidence 4789999999999999999999999999999999875 234456678888888776 6777888
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.-.|+ +..++|+||+|+ ||+|..++.+.. .++++.++++...|+.||.-||+- |+|||||||+|||+|..|
T Consensus 140 LhyAFQ----D~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~~G 212 (1317)
T KOG0612|consen 140 LHYAFQ----DERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDKSG 212 (1317)
T ss_pred HHHHhc----CccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEecccC
Confidence 888888 788999999999 999999998875 599999999999999999999987 999999999999999888
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHh
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~ 257 (393)
. ++|+|||.+..+... ....+|||.|.+||++.
T Consensus 213 H-------------------------------------------ikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLq 249 (1317)
T KOG0612|consen 213 H-------------------------------------------IKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQ 249 (1317)
T ss_pred c-------------------------------------------EeeccchhHHhcCCCCcEEeccccCCCCccCHHHHH
Confidence 4 999999998776532 34568999999999997
Q ss_pred c-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 258 G-----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 258 ~-----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
. +.|++.+|+||+||++|||+.|..||...+. -+....|+..
T Consensus 250 s~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl------veTY~KIm~h--------------------------- 296 (1317)
T KOG0612|consen 250 SQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL------VETYGKIMNH--------------------------- 296 (1317)
T ss_pred hhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH------HHHHHHHhch---------------------------
Confidence 4 4589999999999999999999999976652 2233333322
Q ss_pred ccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCCCcC---HHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKLRAS---AADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt---~~ell~hp~~~~~ 389 (393)
++.+.|| ..+|.++.+||+++++ +|+.|.. ++++-.||||.++
T Consensus 297 -------------k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 297 -------------KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred -------------hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence 1223344 4578899999999988 8999998 9999999999986
No 193
>KOG0690|consensus
Probab=100.00 E-value=5.1e-40 Score=287.55 Aligned_cols=250 Identities=24% Similarity=0.378 Sum_probs=213.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccc----hhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA----DTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|+.+++||+|+||.|-+|+.+.+++.+|||++++.-... ..-..|.++|+.. .||.+..+
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~--------------~HPFLt~L 233 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC--------------RHPFLTSL 233 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc--------------cCcHHHHh
Confidence 57889999999999999999999999999999998754332 2234577888887 88888888
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
--+|+ ..+.+|.||||. ||.|+-.+.+. ..++++..+.+...|+.||.|||++ +||.||||.+|.|+|.|+.
T Consensus 234 KYsFQ----t~drlCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~-~ivYRDlKLENLlLDkDGH 306 (516)
T KOG0690|consen 234 KYSFQ----TQDRLCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSR-NIVYRDLKLENLLLDKDGH 306 (516)
T ss_pred hhhhc----cCceEEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhC-CeeeeechhhhheeccCCc
Confidence 88888 778899999999 88888777665 3499999999999999999999998 9999999999999999984
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~~ 259 (393)
+|++|||++..- +......+|||.|.|||++...
T Consensus 307 -------------------------------------------IKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDn 343 (516)
T KOG0690|consen 307 -------------------------------------------IKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDN 343 (516)
T ss_pred -------------------------------------------eEeeecccchhcccccceeccccCChhhcCchhhccc
Confidence 999999998743 4556788999999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.|++++|.|.+||++|||++|+.||....... .
T Consensus 344 DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k------L----------------------------------------- 376 (516)
T KOG0690|consen 344 DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK------L----------------------------------------- 376 (516)
T ss_pred cccceeehhhhhHHHHHHHhccCcccccchhH------H-----------------------------------------
Confidence 99999999999999999999999997544211 1
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
..-++-+...||...++++..|+..+|..||.+|+. |.|+.+|+||+++
T Consensus 377 -FeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 377 -FELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred -HHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 112334455677888899999999999999999984 8999999999876
No 194
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=8.8e-38 Score=287.69 Aligned_cols=279 Identities=30% Similarity=0.476 Sum_probs=210.4
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++.+.||+|++|.||+|.+..+++.+|+|.+.... .....+.+|+.+++.+ .|+|++++.+.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~ 66 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL--------------RHPNIVRLKEI 66 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc--------------cCCCeeeheee
Confidence 688999999999999999999999999999987542 2334577899999998 78999999988
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+... .....++|+||+++++...+.... ..+++..+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~~--~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~-~~~h~dl~p~nil~~~~~----- 137 (287)
T cd07840 67 VTSK--GKGSIYMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILINNDG----- 137 (287)
T ss_pred EecC--CCCcEEEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEEcCCC-----
Confidence 8621 136899999999888888876543 3588999999999999999999998 999999999999998776
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcC-CC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++++|||.+...... .....++..|+|||.+.+. .+
T Consensus 138 --------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 179 (287)
T cd07840 138 --------------------------------------VLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRY 179 (287)
T ss_pred --------------------------------------CEEEccccceeeccCCCcccccccccccccCCceeeEccccC
Confidence 4999999998765433 2334567889999987654 57
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++||||||+++|+|++|+.||...+ ....+..+....+..+...+...... .. ...... ....
T Consensus 180 ~~~~Dv~slG~~l~el~t~~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~--~~~~ 244 (287)
T cd07840 180 GPEVDMWSVGCILAELFLGKPIFQGST------ELEQLEKIFELCGSPTDENWPGVSKL-PW------FENLKP--KKPY 244 (287)
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCchhhccccccc-hh------hhhccc--cccc
Confidence 899999999999999999999997655 44555666665555444332221111 00 000000 0000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...+.... ...++..+.+++++||..||.+||+++++++||||
T Consensus 245 ~~~~~~~~--~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 245 KRRLREFF--KHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhHHHHHh--cccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 11111111 12246789999999999999999999999999997
No 195
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.5e-38 Score=288.09 Aligned_cols=243 Identities=13% Similarity=0.145 Sum_probs=193.6
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
..||+|++|.||+|.. +++.||||.++..... .+.+.+|+.+|+.+ .|+|++++++.+..
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~nIv~~~g~~~~ 89 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI--------------DSNNILKIYGFIID 89 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc--------------CCCCEEEEeeeEEe
Confidence 5789999999999976 6889999998754332 35567999999999 89999999998864
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
........++||||+ +|+|.+.+... ..++......++.|++.|+++||+..+++||||||+||+++.++
T Consensus 90 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~------- 160 (283)
T PHA02988 90 IVDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY------- 160 (283)
T ss_pred cccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC-------
Confidence 333456789999999 77888887654 34888899999999999999999744899999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc--CCCCchhh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG--AGYGPAAD 266 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~D 266 (393)
.+|++|||++...........++..|+|||++.+ ..++.++|
T Consensus 161 ------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~D 204 (283)
T PHA02988 161 ------------------------------------KLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDD 204 (283)
T ss_pred ------------------------------------cEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhh
Confidence 4999999998866555556678999999999976 57899999
Q ss_pred HHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHh
Q psy12288 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLT 346 (393)
Q Consensus 267 iwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (393)
||||||++|+|++|+.||...+ .......+.....
T Consensus 205 i~SlGvil~el~~g~~Pf~~~~------~~~~~~~i~~~~~--------------------------------------- 239 (283)
T PHA02988 205 IYSLGVVLWEIFTGKIPFENLT------TKEIYDLIINKNN--------------------------------------- 239 (283)
T ss_pred hhHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcCC---------------------------------------
Confidence 9999999999999999997543 1122111111000
Q ss_pred hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 347 EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 347 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...++...+..+.+||.+||+.||.+|||++++++.
T Consensus 240 -~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 240 -SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred -CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 011223456788999999999999999999999864
No 196
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.9e-38 Score=286.10 Aligned_cols=247 Identities=28% Similarity=0.431 Sum_probs=197.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----------chhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----------ADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
+|.+...||+|++|.||+|.+..+++.+|+|.+...... .+.+.+|+.+++.+ .|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ 66 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL--------------QHE 66 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc--------------CCC
Confidence 478889999999999999999989999999987643221 14567888999998 899
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
+++++++.+. ...+.+++|||+ +++|.+.+... ..++...+..++.|++.||++||+. |++|+||+|+||++
T Consensus 67 ~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~-~ivH~di~p~nil~ 139 (267)
T cd06628 67 NIVQYLGSSL----DADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILV 139 (267)
T ss_pred CeeeEEEEEE----eCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc-CcccccCCHHHEEE
Confidence 9999998876 566889999999 67888877654 3488899999999999999999998 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---------CCCCCCCC
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------FADEIQTR 248 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------~~~~~~t~ 248 (393)
+.++ .++|+|||.+...... .....++.
T Consensus 140 ~~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (267)
T cd06628 140 DNKG-------------------------------------------GIKISDFGISKKLEANSLSTKTNGARPSLQGSV 176 (267)
T ss_pred cCCC-------------------------------------------CEEecccCCCcccccccccCCccccccccCCCc
Confidence 7666 4999999988765421 11234678
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
.|+|||.+.+..++.++|+||||+++|+|++|+.||...+. . ..+.......
T Consensus 177 ~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~---~~~~~~~~~~------------------- 228 (267)
T cd06628 177 FWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ------L---QAIFKIGENA------------------- 228 (267)
T ss_pred CccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH------H---HHHHHHhccC-------------------
Confidence 89999999988889999999999999999999999975431 1 1111111100
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...++...+..+.++|++||+.||.+||++.|+++||||
T Consensus 229 -------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 229 -------------------SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred -------------------CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 001223456788899999999999999999999999997
No 197
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=8.5e-38 Score=287.31 Aligned_cols=276 Identities=30% Similarity=0.494 Sum_probs=210.7
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++.+.||+|++|.||+|.+..+++.+++|.+..... ....+.+|+.+++.+ .|++++++++.
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~ 66 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL--------------NHPNIIKLLDV 66 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh--------------cCCCcchHHHh
Confidence 6778999999999999999998999999998864322 245677899999998 78999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+. .+...++++||+++++...+.... ..++...+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 67 ~~----~~~~~~~v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~----- 135 (283)
T cd05118 67 FR----HKGDLYLVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH-GILHRDLKPENLLINTEG----- 135 (283)
T ss_pred hc----cCCCEEEEEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC-CeeecCcCHHHEEECCCC-----
Confidence 87 567899999999889888876643 4589999999999999999999998 999999999999998765
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~ 262 (393)
.++++|||.+...... .....++..|+|||.+.+. .++
T Consensus 136 --------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~ 177 (283)
T cd05118 136 --------------------------------------VLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYS 177 (283)
T ss_pred --------------------------------------cEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCC
Confidence 4999999988765432 2234577889999999876 679
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|+.||...+ ..+.+..+....+......+........... ...........
T Consensus 178 ~~~Di~slG~~l~~l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~- 245 (283)
T cd05118 178 TPVDIWSVGCIFAELLSRRPLFPGKS------EIDQLFKIFRTLGTPDPEVWPKFTSLARNYK-----FSFPKKAGMPL- 245 (283)
T ss_pred chhHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCchHhcccchhhhhhhh-----hhhccccccCH-
Confidence 99999999999999999999997655 3444555555444433333222211100000 00000000000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.......+..+.++|.+||..||.+||++++++.||||
T Consensus 246 ------~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 246 ------PKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred ------HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 01123457889999999999999999999999999997
No 198
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1e-37 Score=284.54 Aligned_cols=253 Identities=26% Similarity=0.438 Sum_probs=200.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+|+..+.||+|++|.||+|.+..+++.||+|.+..... ..+.+.+|+.+++.+ .|+|++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv 66 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL--------------NHPHII 66 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc--------------CCCcee
Confidence 47888999999999999999999999999998864321 235678899999998 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. .+...++||||+ +++|.+.+... ..+++..+..++.|++.||++||++ |++|+||+|+||+++.+
T Consensus 67 ~~~~~~~----~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~-~i~H~~i~~~nil~~~~ 139 (268)
T cd06630 67 RMLGATC----EDSHFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDST 139 (268)
T ss_pred hhhceec----cCCeEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCC
Confidence 9999887 667899999999 67887777654 3488999999999999999999998 99999999999999755
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSV 253 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aP 253 (393)
+. .++|+|||.+...... .....++..|+||
T Consensus 140 ~~------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~P 177 (268)
T cd06630 140 GQ------------------------------------------RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAP 177 (268)
T ss_pred CC------------------------------------------EEEEcccccccccccccccCCccccccccccceeCH
Confidence 42 4899999988765432 1123568899999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|.+.+..++.++|+||+|+++++|++|..||....... ....+......
T Consensus 178 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~------------------------- 226 (268)
T cd06630 178 EVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN------HLALIFKIASA------------------------- 226 (268)
T ss_pred hHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc------hHHHHHHHhcc-------------------------
Confidence 99988888999999999999999999999996433211 11111110000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
.....++...+..+.+++.+||..+|.+|||+.++++||||+
T Consensus 227 ------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 227 ------------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ------------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 001123345667888999999999999999999999999985
No 199
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.3e-38 Score=285.02 Aligned_cols=250 Identities=26% Similarity=0.420 Sum_probs=201.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.++||+|++|.||+|.+..++..+++|.+..... .+.+.+|+.+++.+ .|+|++++.+.+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l--------------~~~~i~~~~~~~ 67 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC--------------DSPYIVKYYGSY 67 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC--------------CCCcEeeeeeee
Confidence 579999999999999999999998899999999876543 57788999999998 899999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+.+.++++|++ +++|.+.+.... ..+++..+..++.|++.|+++||+. +++|+||+|+||+++.++
T Consensus 68 ~----~~~~~~l~~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~ni~~~~~~----- 136 (256)
T cd06612 68 F----KNTDLWIVMEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEG----- 136 (256)
T ss_pred e----cCCcEEEEEecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEECCCC-----
Confidence 7 567899999999 567777765432 4588999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++....... ....++..|+|||.+.+..++.
T Consensus 137 --------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~ 178 (256)
T cd06612 137 --------------------------------------QAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNN 178 (256)
T ss_pred --------------------------------------cEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCc
Confidence 49999999987654322 2234688999999999888999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++||||||+++|+|++|+.||....... . ........+
T Consensus 179 ~~Di~s~G~il~~l~~g~~p~~~~~~~~------~---~~~~~~~~~--------------------------------- 216 (256)
T cd06612 179 KADIWSLGITAIEMAEGKPPYSDIHPMR------A---IFMIPNKPP--------------------------------- 216 (256)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCcchhh------h---hhhhccCCC---------------------------------
Confidence 9999999999999999999996433110 0 000000000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.....+...+..+.++|.+||..||.+|||+.|+++||||
T Consensus 217 ---~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 217 ---PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ---CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 0001122345678899999999999999999999999997
No 200
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.3e-37 Score=285.44 Aligned_cols=268 Identities=24% Similarity=0.327 Sum_probs=204.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|+..++||.|++|.||+|.+..+++.+|+|.+..... ....+.+|+++++.+ .|+|++++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~ 66 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC--------------KSPYIVKYYG 66 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC--------------CCCCeeeeee
Confidence 479999999999999999999999999999998875422 345678899999998 8999999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+... ....+++||||+ +++|.+.+.. .....++...+..++.|++.||+|||+. |++|+||+|+||+++.++
T Consensus 67 ~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~i~H~dl~~~nil~~~~~- 142 (287)
T cd06621 67 AFLDE--SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR-KIIHRDIKPSNILLTRKG- 142 (287)
T ss_pred EEEcc--CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecCC-
Confidence 87532 345689999999 6788776543 2234478899999999999999999998 999999999999997765
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|++||.+.+..+
T Consensus 143 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~ 180 (287)
T cd06621 143 ------------------------------------------QVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPY 180 (287)
T ss_pred ------------------------------------------eEEEeeccccccccccccccccCCccccCHHHhcCCCC
Confidence 4999999998654332 223456888999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||....... ........ ......+....
T Consensus 181 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~---~~~~~~~~~~~--------------------------- 229 (287)
T cd06621 181 SITSDVWSLGLTLLEVAQNRFPFPPEGEPP-LGPIELLS---YIVNMPNPELK--------------------------- 229 (287)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCcccCCC-CChHHHHH---HHhcCCchhhc---------------------------
Confidence 999999999999999999999997553211 11111111 11110000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.........+..+.++|.+||..||.+|||+.|+++||||++...
T Consensus 230 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 230 -----DEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred -----cCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 000000123567889999999999999999999999999987754
No 201
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.5e-37 Score=284.78 Aligned_cols=281 Identities=29% Similarity=0.470 Sum_probs=208.6
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++.+.||+|+||.||+|.+..+++.||+|.+..... ....+.+|+.+++.+.. ..|++++++.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~-----------~~h~~i~~~~~~ 69 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES-----------FEHPNIVRLLDV 69 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhc-----------cCCCCcceEEEE
Confidence 7889999999999999999998899999999874322 22345678888877732 158999999999
Q ss_pred ceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+..... .....+++||++++++.+.+.......+++..+..++.|++.||++||+. +++|+||+|+||+++.++
T Consensus 70 ~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~h~~l~~~nili~~~~---- 144 (287)
T cd07838 70 CHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNILVTSDG---- 144 (287)
T ss_pred EeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhEEEccCC----
Confidence 874332 22358999999988888888765444689999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||.+...... .....++..|+|||.+.+..++.
T Consensus 145 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~ 185 (287)
T cd07838 145 ---------------------------------------QVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYAT 185 (287)
T ss_pred ---------------------------------------CEEEeccCcceeccCCcccccccccccccChHHhccCCCCC
Confidence 4999999988765332 22345688899999999888999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+||||+++|+|++|.+||...+ ..+.+..+....+......+........ .........
T Consensus 186 ~~Di~s~G~~l~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~---- 247 (287)
T cd07838 186 PVDMWSVGCIFAELFRRRPLFRGTS------EADQLDKIFDVIGLPSEEEWPRNVSLPR--------SSFPSYTPR---- 247 (287)
T ss_pred cchhhhHHHHHHHHHhCCCcccCCC------hHHHHHHHHHHcCCCChHhcCCCcccch--------hhccccccc----
Confidence 9999999999999999999997655 3445555555443322111100000000 000000000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.........+..+.++|.+||..||.+||+++|++.||||
T Consensus 248 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 248 ---SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ---chhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0011113456788899999999999999999999999998
No 202
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.7e-37 Score=282.03 Aligned_cols=253 Identities=26% Similarity=0.363 Sum_probs=200.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.++|++.+.||.|++|.||+|.+..+++.+++|.+.... ...+.+.+|+.+++.+ .|++++++++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~~~ 67 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC--------------RHPNIVAYFG 67 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC--------------CCCChhceEE
Confidence 358999999999999999999999999999999887542 2346778899999998 8999999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+..++++|||+ ++++.+.+... ...+++..+..++.|++.||+|||++ +++|+||+|+||+++.++
T Consensus 68 ~~~----~~~~~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~--- 138 (262)
T cd06613 68 SYL----RRDKLWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET-GKIHRDIKGANILLTEDG--- 138 (262)
T ss_pred EEE----eCCEEEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCChhhEEECCCC---
Confidence 876 567799999999 55666666543 24589999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC--
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-- 259 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-- 259 (393)
.++|+|||.+...... .....++..|+|||.+.+.
T Consensus 139 ----------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~ 178 (262)
T cd06613 139 ----------------------------------------DVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERK 178 (262)
T ss_pred ----------------------------------------CEEECccccchhhhhhhhccccccCCccccCchhhccccc
Confidence 4999999988765432 2334678889999999876
Q ss_pred -CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 260 -GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 -~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.++.++|+||||+++|+|++|+.||...+. ......... .+..+.
T Consensus 179 ~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~------~~~~~~~~~-~~~~~~--------------------------- 224 (262)
T cd06613 179 GGYDGKCDIWALGITAIELAELQPPMFDLHP------MRALFLISK-SNFPPP--------------------------- 224 (262)
T ss_pred CCcCchhhhHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-ccCCCc---------------------------
Confidence 788999999999999999999999975441 111111100 000000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
........+..+.++|++||..||.+|||+++++.|||
T Consensus 225 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 225 ---------KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ---------cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 00011344567889999999999999999999999998
No 203
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=8.3e-38 Score=287.58 Aligned_cols=277 Identities=30% Similarity=0.479 Sum_probs=211.5
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcc-cccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQA-SEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~-~~~i~~~~~~ 106 (393)
|++.+.||+|++|.||+|....+++.|+||.+...... .....+|+..++.+ . |++++++++.
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~--------------~~h~~i~~~~~~ 66 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKL--------------NEHPNIVKLKEV 66 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhc--------------cCCCCchhHHHH
Confidence 67889999999999999999989999999988654321 22334677778777 5 8999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+. .+...++|||++++++.+.+.......++...+..++.|++.||.|||++ |++|+||+|+||+++.++
T Consensus 67 ~~----~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~dl~~~ni~i~~~~----- 136 (283)
T cd07830 67 FR----ENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-GFFHRDLKPENLLVSGPE----- 136 (283)
T ss_pred hh----cCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCC-----
Confidence 87 57789999999999999888776544589999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhc-CCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG-AGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~-~~~~~ 263 (393)
.++|+|||.+...... .....++..|+|||.+.+ ..++.
T Consensus 137 --------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 178 (283)
T cd07830 137 --------------------------------------VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSS 178 (283)
T ss_pred --------------------------------------CEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCC
Confidence 4999999998765432 234467889999998854 44789
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+||||+++++|++|++||+..+ ..+.+..+....+..+...+............ ........
T Consensus 179 ~~Di~s~G~~l~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---- 243 (283)
T cd07830 179 PVDIWALGCIMAELYTLRPLFPGSS------EIDQLYKICSVLGTPTKQDWPEGYKLASKLGF-----RFPQFAPT---- 243 (283)
T ss_pred ccchhhHHHHHHHHHhCCCccCCCC------hHHHHHHHHHhcCCCChhhhhhHhhhhccccc-----cccccccc----
Confidence 9999999999999999999997765 45566677777777655443332211111100 00000000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.+... ....+..+.++|++||..||++|||++|++.||||
T Consensus 244 ~~~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 244 SLHQL---IPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cHHHH---cccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00110 11225778899999999999999999999999997
No 204
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.7e-37 Score=281.33 Aligned_cols=249 Identities=26% Similarity=0.386 Sum_probs=203.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||.|+||.||.+.+..+++.+++|.+... ......+.+|+.+++.+ .|+|++++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~~~ 66 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL--------------QHPNIIAYYN 66 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC--------------CCCCeeEEEe
Confidence 599999999999999999999999999999987643 23345677899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .....+++|||+ +++|.+.+.......++...+..++.|++.|+++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~ni~~~~~~--- 138 (256)
T cd08221 67 HFM----DDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA-GILHRDIKTLNIFLTKAG--- 138 (256)
T ss_pred EEe----cCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChHhEEEeCCC---
Confidence 987 567899999999 78998888765445588999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||++....... ....+++.|+|||.+.+..+
T Consensus 139 ----------------------------------------~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~ 178 (256)
T cd08221 139 ----------------------------------------LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKY 178 (256)
T ss_pred ----------------------------------------CEEECcCcceEEcccccccccccCCCccccCHhhcCCCCC
Confidence 49999999887553322 34567899999999988888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||.... .......+.. +..+.
T Consensus 179 ~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~~--~~~~~------------------------------ 220 (256)
T cd08221 179 NFKSDIWALGCVLYELLTLKRTFDATN------PLNLVVKIVQ--GNYTP------------------------------ 220 (256)
T ss_pred CCcchhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHc--CCCCC------------------------------
Confidence 999999999999999999999996543 1222222211 11100
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.+...+..+.++|.+||..+|.+||++.++++|||+
T Consensus 221 ---------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 221 ---------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred ---------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 112345678899999999999999999999999996
No 205
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.8e-38 Score=292.35 Aligned_cols=253 Identities=25% Similarity=0.386 Sum_probs=199.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+.|.....||+|+||.||++.+..++..||||.+.... ...+.+.+|+.+++.+ .|+|++++++
T Consensus 21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~ii~~~~ 86 (292)
T cd06658 21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY--------------HHENVVDMYN 86 (292)
T ss_pred HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC--------------CCCcHHHHHH
Confidence 456777889999999999999999999999999886432 2345577899999888 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+++.++||||+ ++++.+.+.. ..++++++..++.|++.||+|||++ +++||||||+||+++.++
T Consensus 87 ~~~----~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~--- 155 (292)
T cd06658 87 SYL----VGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDG--- 155 (292)
T ss_pred hee----cCCeEEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCC---
Confidence 887 567899999999 5566665533 3488999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+..+
T Consensus 156 ----------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 195 (292)
T cd06658 156 ----------------------------------------RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPY 195 (292)
T ss_pred ----------------------------------------CEEEccCcchhhcccccccCceeecCccccCHHHHccCCC
Confidence 4999999988654322 223457889999999988889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|+.||...+ ....+..+... .+.
T Consensus 196 ~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~~---~~~------------------------------ 236 (292)
T cd06658 196 GTEVDIWSLGIMVIEMIDGEPPYFNEP------PLQAMRRIRDN---LPP------------------------------ 236 (292)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhc---CCC------------------------------
Confidence 999999999999999999999997543 11111111111 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
........+..+.+++.+||..||.+|||++|+++||||+..
T Consensus 237 ------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~ 278 (292)
T cd06658 237 ------RVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLA 278 (292)
T ss_pred ------ccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence 000112345678899999999999999999999999999864
No 206
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.5e-37 Score=281.76 Aligned_cols=251 Identities=27% Similarity=0.409 Sum_probs=196.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc------cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|++.+.||+|+||.||.|.+..++..||+|.+..... ....+.+|+.+++.+ .|++++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~ 67 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL--------------LHERIV 67 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc--------------CCCCee
Confidence 379999999999999999999999999999998753221 124567799999998 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+.+.. .....++++|||+ +++|.+.+... ..++...+..++.|++.||++||++ +++|+||+|+||+++.+
T Consensus 68 ~~~~~~~~--~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~ 142 (265)
T cd06652 68 QYYGCLRD--PMERTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSN-MIVHRDIKGANILRDSV 142 (265)
T ss_pred eEEeEecc--CCCceEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEecCC
Confidence 99887652 1245688999999 67888877654 3478889999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------CCCCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------HFADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------~~~~~~~t~~y~aPE 254 (393)
+ .++|+|||.+..... ......++..|+|||
T Consensus 143 ~-------------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 179 (265)
T cd06652 143 G-------------------------------------------NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPE 179 (265)
T ss_pred C-------------------------------------------CEEECcCccccccccccccccccccCCCCccccChh
Confidence 5 499999998875432 122345788999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+.+..++.++|+||||+++|+|++|+.||.... . ...+........
T Consensus 180 ~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~------~---~~~~~~~~~~~~------------------------ 226 (265)
T cd06652 180 VISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE------A---MAAIFKIATQPT------------------------ 226 (265)
T ss_pred hhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc------h---HHHHHHHhcCCC------------------------
Confidence 9988888999999999999999999999996432 1 111111111100
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
....+...+..+.++|++|+. +|.+||+++|+++|||++
T Consensus 227 -------------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 227 -------------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred -------------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 001234456678899999995 999999999999999985
No 207
>KOG0579|consensus
Probab=100.00 E-value=1.2e-39 Score=306.55 Aligned_cols=258 Identities=25% Similarity=0.359 Sum_probs=211.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec-ccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS-DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+-|.|+..||.|+||.||+|.++.++-..|.|++.. +....+.+.-|+.+|..+ .||+|+++++
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C--------------dHP~ivkLl~ 96 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC--------------DHPVIVKLLS 96 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC--------------CChHHHHHHH
Confidence 3468899999999999999999999998899998763 344567788899999999 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.|. ..+.+||..|+|+|+-.+.+.-.-...+.++++..++.|++.||.|||++ +|+|||||..|||+..|+.
T Consensus 97 ayy----~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~-~iIHRDLKAGNiL~TldGd--- 168 (1187)
T KOG0579|consen 97 AYY----FENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ-NIIHRDLKAGNILLTLDGD--- 168 (1187)
T ss_pred HHh----ccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc-chhhhhccccceEEEecCc---
Confidence 998 56679999999966555555444446699999999999999999999999 9999999999999999985
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhc----
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIG---- 258 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~---- 258 (393)
++|+|||.+.... ......+|||+|||||+...
T Consensus 169 ----------------------------------------irLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~K 208 (1187)
T KOG0579|consen 169 ----------------------------------------IRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFK 208 (1187)
T ss_pred ----------------------------------------EeeecccccccchhHHhhhccccCCcccccchheeecccc
Confidence 9999999876442 23456789999999999753
Q ss_pred -CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 -AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 -~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.+|..++||||||+++.+|..+.+|-...+++ ..+.++.-.-|+.+
T Consensus 209 D~PYDykaDiWSlGITLIEMAqiEPPHhelnpM---------RVllKiaKSePPTL------------------------ 255 (1187)
T KOG0579|consen 209 DQPYDYKADIWSLGITLIEMAQIEPPHHELNPM---------RVLLKIAKSEPPTL------------------------ 255 (1187)
T ss_pred CCCchhhhhHHhhhhHHHHHhccCCCccccchH---------HHHHHHhhcCCCcc------------------------
Confidence 57899999999999999999999998766632 22222222222211
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
-.|+.-+..|.||+.+||..||..||++.|+++||||.+.-+
T Consensus 256 ------------lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 256 ------------LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred ------------cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 123455678899999999999999999999999999987654
No 208
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1e-37 Score=284.78 Aligned_cols=250 Identities=24% Similarity=0.368 Sum_probs=194.4
Q ss_pred CeEEEEEEe--cccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKL--GWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~l--g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.+ |+|+||.||++.+..++..+|+|.+...... ..|+.....+ ..|+|++++++
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~~~~~-------------~~h~~iv~~~~ 76 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMVHQLM-------------KDNPNFIKLYY 76 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHHHHHh-------------hcCCCEEEEEE
Confidence 467777776 9999999999999999999999998753211 1233333322 16899999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .++..++||||+ +++|.+++.... .++++++..++.|++.||++||+. |++|+||+|+||+++.++.
T Consensus 77 ~~~----~~~~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~-- 147 (267)
T PHA03390 77 SVT----TLKGHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH-NIIHNDIKLENVLYDRAKD-- 147 (267)
T ss_pred EEe----cCCeeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEeCCCC--
Confidence 887 556899999999 789998887653 589999999999999999999998 9999999999999976652
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++++|||.+...... ....++..|+|||++.+..++.+
T Consensus 148 ----------------------------------------~~~l~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~ 186 (267)
T PHA03390 148 ----------------------------------------RIYLCDYGLCKIIGTP-SCYDGTLDYFSPEKIKGHNYDVS 186 (267)
T ss_pred ----------------------------------------eEEEecCccceecCCC-ccCCCCCcccChhhhcCCCCCch
Confidence 4899999988765433 23457889999999998889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|+||+|+++|+|++|+.||........ .... .....
T Consensus 187 ~DvwslG~il~~l~~g~~p~~~~~~~~~--~~~~---~~~~~-------------------------------------- 223 (267)
T PHA03390 187 FDWWAVGVLTYELLTGKHPFKEDEDEEL--DLES---LLKRQ-------------------------------------- 223 (267)
T ss_pred hhHHHHHHHHHHHHHCCCCCCCCCcchh--hHHH---HHHhh--------------------------------------
Confidence 9999999999999999999974432211 0000 00000
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcC-HHHHhcCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-AADCLRHPWLNP 388 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~ell~hp~~~~ 388 (393)
..........+..+.+||.+||+.||.+||+ ++|+++||||++
T Consensus 224 -~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 224 -QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred -cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 0111122356678899999999999999996 699999999985
No 209
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.8e-37 Score=288.77 Aligned_cols=254 Identities=21% Similarity=0.327 Sum_probs=199.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||++.+..+++.|++|.+.... .....+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~ 66 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA--------------ENPFVVSM 66 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC--------------CCCCeeee
Confidence 36999999999999999999999999999999887542 1234566888888887 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.++++|||++ +++|.+.+... ..+++..+..++.|++.|++|||++ +++|+||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~NIll~~~~- 138 (305)
T cd05609 67 FCSFE----TKRHLCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDNLLITSMG- 138 (305)
T ss_pred EEEEe----cCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHEEECCCC-
Confidence 98886 667899999999 67888777654 3488999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------------------CCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------------------FADE 244 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------------------~~~~ 244 (393)
.++|+|||.+...... ....
T Consensus 139 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (305)
T cd05609 139 ------------------------------------------HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQV 176 (305)
T ss_pred ------------------------------------------CEEEeeCCCccccCcCccccccccccccchhhccccCC
Confidence 4999999987531100 0112
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
.++..|+|||.+....++.++|+||||+++|+|++|..||.+.+. ...+..+.......|.
T Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~~------------- 237 (305)
T cd05609 177 CGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP------EELFGQVISDDIEWPE------------- 237 (305)
T ss_pred ccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcccCCCC-------------
Confidence 467789999999888899999999999999999999999965431 1111111110000000
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC---HHHHhcCCCCCCCC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS---AADCLRHPWLNPRR 390 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~ell~hp~~~~~~ 390 (393)
.....+..+.++|.+||..||++||+ +.++++||||....
T Consensus 238 --------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 238 --------------------------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred --------------------------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 01134567889999999999999998 79999999997653
No 210
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.9e-38 Score=286.68 Aligned_cols=252 Identities=25% Similarity=0.338 Sum_probs=195.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|++++++++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~ii~~~~ 73 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC--------------KHCNIVAYFG 73 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc--------------CCCCeeeeeE
Confidence 458999999999999999999999999999999987432 2234567899999988 8899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|.+.+... ..+++..+..++.|++.|+.|||+. |++|+||+|+||+++.++
T Consensus 74 ~~~----~~~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nill~~~~--- 143 (267)
T cd06646 74 SYL----SREKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSK-GKMHRDIKGANILLTDNG--- 143 (267)
T ss_pred EEE----eCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCC---
Confidence 886 556789999999 56777777544 3488999999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc---
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG--- 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~--- 258 (393)
.++|+|||++...... .....++..|+|||.+..
T Consensus 144 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 183 (267)
T cd06646 144 ----------------------------------------DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKN 183 (267)
T ss_pred ----------------------------------------CEEECcCccceeecccccccCccccCccccCHhHcccccC
Confidence 4999999998765322 223467889999999853
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|+||+||++|+|++|+.||........ ...+... ...+
T Consensus 184 ~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~------~~~~~~~-~~~~---------------------------- 228 (267)
T cd06646 184 GGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA------LFLMSKS-NFQP---------------------------- 228 (267)
T ss_pred CCCcchhhHHHHHHHHHHHHhCCCCccccchhhh------heeeecC-CCCC----------------------------
Confidence 3478899999999999999999999854331110 0000000 0000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
.........+..+.++|++||..||++|||++++++|+|
T Consensus 229 --------~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 229 --------PKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred --------CCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 000011234568889999999999999999999999987
No 211
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.5e-37 Score=283.48 Aligned_cols=250 Identities=28% Similarity=0.424 Sum_probs=195.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc------ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+|++.+.||+|+||.||+|.+..++..|++|.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 68 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL--------------QHERIVQ 68 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc--------------CCCCeee
Confidence 6899999999999999999999999999999876432 1224567899999998 7899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+.. ..+...++++|++ +++|.+.+.... .++...+..++.|++.||++||+. +++|+||+|+||+++.++
T Consensus 69 ~~~~~~~--~~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~-~i~H~~l~p~nil~~~~~ 143 (266)
T cd06651 69 YYGCLRD--RAEKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSN-MIVHRDIKGANILRDSAG 143 (266)
T ss_pred EEEEEEc--CCCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCC
Confidence 8887752 2346789999999 678888876543 488899999999999999999987 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~ 255 (393)
.++|+|||++...... .....++..|+|||.
T Consensus 144 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 180 (266)
T cd06651 144 -------------------------------------------NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEV 180 (266)
T ss_pred -------------------------------------------CEEEccCCCccccccccccCCccccCCccccccCHHH
Confidence 4999999988754321 122357888999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
+.+..++.++|+||+||++|+|++|+.||..... ...+.......
T Consensus 181 ~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---------~~~~~~~~~~~-------------------------- 225 (266)
T cd06651 181 ISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---------MAAIFKIATQP-------------------------- 225 (266)
T ss_pred hCCCCCCchhhhHHHHHHHHHHHHCCCCccccch---------HHHHHHHhcCC--------------------------
Confidence 9988889999999999999999999999964321 11111111100
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
....++...+..+.+++ +||..+|.+||+++|+++||||+
T Consensus 226 -----------~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 226 -----------TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred -----------CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 00112233455677788 57778999999999999999996
No 212
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.5e-37 Score=284.06 Aligned_cols=275 Identities=32% Similarity=0.520 Sum_probs=212.5
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++.+.||+|++|.||+|.+..+++.||+|.+... ....+.+..|+.+++.+ .|++++++.+.
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~~ 66 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL--------------KHPNIVKLLDV 66 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc--------------CCCCHHHHHhh
Confidence 67789999999999999999999999999998764 23345667899999988 78999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+. .....++|||+++++|.+.+.... ..++...+..++.|++.||++||++ |++|+||+|+||+++.++
T Consensus 67 ~~----~~~~~~~v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~~l~~~ni~~~~~~----- 135 (282)
T cd07829 67 IH----TERKLYLVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILINRDG----- 135 (282)
T ss_pred hh----cCCceEEEecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChheEEEcCCC-----
Confidence 87 557899999999889998887653 3489999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~ 262 (393)
.++|+|||.+...... .....++..|+|||.+.+. .++
T Consensus 136 --------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 177 (282)
T cd07829 136 --------------------------------------VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYS 177 (282)
T ss_pred --------------------------------------CEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCC
Confidence 4999999988765332 2234457789999999876 689
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|++++|.+||...+ ....+..+....+......+....... .+.. .... ....
T Consensus 178 ~~~Dv~slG~~l~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~---~~~~--- 242 (282)
T cd07829 178 TAVDIWSVGCIFAEMITGKPLFPGDS------EIDQLFKIFQILGTPTEESWPGVTKLP-DYKP--TFPK---FPPK--- 242 (282)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHHHhCCCcHHHHHhhcccc-cccc--cccc---cCcc---
Confidence 99999999999999999999997655 455566666666665554443322211 0000 0000 0000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.... .+ ...+..+.++|++||..||++||++++++.||||
T Consensus 243 -~~~~--~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 243 -DLEK--VL-PRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred -chHH--hc-ccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 0000 01 1236678999999999999999999999999998
No 213
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.6e-38 Score=286.40 Aligned_cols=256 Identities=25% Similarity=0.391 Sum_probs=202.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||+|++|.||+|.+..+++.+++|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~ 66 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC--------------NSPYIVGFYG 66 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC--------------CCCchhhhhe
Confidence 36888999999999999999999999999999887542 2335567889899888 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCeeeccCCCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+. .....++++|++ +++|.+++.... ..+++..+..++.|++.|+++||+ . |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~-~i~H~dl~~~ni~~~~~~-- 138 (265)
T cd06605 67 AFY----NNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH-KIIHRDVKPSNILVNSRG-- 138 (265)
T ss_pred eee----cCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC-CeecCCCCHHHEEECCCC--
Confidence 887 567899999999 478888776543 458899999999999999999999 7 999999999999998765
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+...... .....++..|+|||.+.+..++
T Consensus 139 -----------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 177 (265)
T cd06605 139 -----------------------------------------QIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYS 177 (265)
T ss_pred -----------------------------------------CEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCC
Confidence 4999999988655322 1225678899999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|..||....... ......+.......+.
T Consensus 178 ~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~------------------------------- 222 (265)
T cd06605 178 VKSDIWSLGLSLIELATGRFPYPPENDPP----DGIFELLQYIVNEPPP------------------------------- 222 (265)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCcccccc----ccHHHHHHHHhcCCCC-------------------------------
Confidence 99999999999999999999997543210 0111111111111000
Q ss_pred HHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 343 QVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 343 ~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+.. .+..+.++|.+||..||.+|||+.+++.||||+.
T Consensus 223 -------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 223 -------RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred -------CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 01112 5667889999999999999999999999999975
No 214
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.3e-38 Score=287.85 Aligned_cols=251 Identities=23% Similarity=0.355 Sum_probs=196.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
++|++.++||+|+||.||+|.+..+++.||+|.++.... ....+.+|+.+++.+ .|+|++++++.
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l--------------~h~~ii~~~~~ 74 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC--------------KHSNIVAYFGS 74 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC--------------CCCCeeeEEEE
Confidence 478999999999999999999999999999999875432 234567889999988 89999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....+++|||+ +++|.+++... ..+++.++..++.|++.|+.|||+. |++|+||||+||+++.++
T Consensus 75 ~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~---- 143 (267)
T cd06645 75 YL----RRDKLWICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILLTDNG---- 143 (267)
T ss_pred EE----eCCEEEEEEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC----
Confidence 86 567899999999 67888777554 3589999999999999999999998 999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh---cC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI---GA 259 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~---~~ 259 (393)
.++|+|||++...... .....++..|+|||++. ..
T Consensus 144 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 184 (267)
T cd06645 144 ---------------------------------------HVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKG 184 (267)
T ss_pred ---------------------------------------CEEECcceeeeEccCcccccccccCcccccChhhhccccCC
Confidence 4999999998655322 23346889999999985 34
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+|||||++|+|++|..||...... ..+..... ....+...
T Consensus 185 ~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~------~~~~~~~~-~~~~~~~~-------------------------- 231 (267)
T cd06645 185 GYNQLCDIWAVGITAIELAELQPPMFDLHPM------RALFLMTK-SNFQPPKL-------------------------- 231 (267)
T ss_pred CCCchhhhHHHHHHHHHHhcCCCCcccccch------hhHHhhhc-cCCCCCcc--------------------------
Confidence 5788999999999999999999998644311 11110000 00000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
. .....+..+.++|++||..||++|||++++++|||
T Consensus 232 ------~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 232 ------K----DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ------c----ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 0 00123456789999999999999999999999998
No 215
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.4e-37 Score=282.20 Aligned_cols=249 Identities=23% Similarity=0.368 Sum_probs=202.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++.+.||.|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~ 66 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL--------------NHPFLVNLW 66 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC--------------CCCChHHHH
Confidence 4899999999999999999999999999999887432 2345678899999988 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .+...++|+||+ +++|.+.+... ..+++..+..++.|++.||.|||++ +++|+||+|+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~-- 137 (258)
T cd05578 67 YSFQ----DEENMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK-GIIHRDIKPDNILLDEQG-- 137 (258)
T ss_pred Hhhc----CCCeEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEEcCCC--
Confidence 8887 677899999999 77888777654 3588999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||.+...... .....++..|+|||.+.+..+
T Consensus 138 -----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 176 (258)
T cd05578 138 -----------------------------------------HVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGY 176 (258)
T ss_pred -----------------------------------------CEEEeecccccccCCCccccccCCChhhcCHHHHcccCC
Confidence 4899999988765432 234457888999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||...+.. ..+.+......
T Consensus 177 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~------------------------------------ 216 (258)
T cd05578 177 SVAVDWWSLGVTAYECLRGKRPYRGHSRT----IRDQIRAKQET------------------------------------ 216 (258)
T ss_pred CCcccchhhHHHHHHHHhCCCCCCCCCcc----HHHHHHHHhcc------------------------------------
Confidence 99999999999999999999999755421 11111111110
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH--HHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA--ADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~--~ell~hp~~ 386 (393)
....++...+..+.++|.+||..||.+||++ +|+++||||
T Consensus 217 -----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 -----ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred -----ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 0011223345788899999999999999999 999999998
No 216
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.3e-37 Score=280.41 Aligned_cols=250 Identities=24% Similarity=0.417 Sum_probs=201.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|+||.||+|....++..+|+|.+.... ...+.+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~--------------~h~~i~~~~~ 66 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM--------------KHPNIVTFFA 66 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC--------------CCCChhhhhh
Confidence 5899999999999999999999999999999886432 2345677899999998 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++++||+ +++|.+.+.......+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~nil~~~~~~-- 139 (257)
T cd08225 67 SFQ----ENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLSKNGM-- 139 (257)
T ss_pred eec----cCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEcCCCC--
Confidence 876 667899999999 77888888765544578999999999999999999998 9999999999999976642
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||.+....... ....+++.|+|||.+.+..+
T Consensus 140 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~ 179 (257)
T cd08225 140 ----------------------------------------VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPY 179 (257)
T ss_pred ----------------------------------------eEEecccccchhccCCcccccccCCCccccCHHHHcCCCC
Confidence 47999999887654322 22357889999999988889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||++++++++|..||...+. ......+ ..+..+
T Consensus 180 ~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~--~~~~~~------------------------------- 220 (257)
T cd08225 180 NNKTDIWSLGCVLYELCTLKHPFEGNNL------HQLVLKI--CQGYFA------------------------------- 220 (257)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHH--hcccCC-------------------------------
Confidence 9999999999999999999999964331 1111110 001000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
......+..+.++|.+||..+|++|||+.+++.||||
T Consensus 221 --------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 221 --------PISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred --------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 0112345678899999999999999999999999997
No 217
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.2e-37 Score=285.85 Aligned_cols=248 Identities=25% Similarity=0.353 Sum_probs=196.2
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|++++++.+.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~~--- 63 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV--------------SSRFIVSLAYAFE--- 63 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC--------------CCCCEeeeeeEEe---
Confidence 689999999999999999999999886432 2234456789999988 7899999988886
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.....++||||+ +++|.+.+.......+++..+..++.|++.||.+||+. |++|+||+|+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~Nil~~~~~--------- 132 (277)
T cd05577 64 -TKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDDHG--------- 132 (277)
T ss_pred -cCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCC---------
Confidence 567899999999 67888887665444689999999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||.+..... ......++..|++||.+.+..++.++|+|
T Consensus 133 ----------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~ 178 (277)
T cd05577 133 ----------------------------------NVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWF 178 (277)
T ss_pred ----------------------------------CEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhH
Confidence 499999998865432 22234567889999999888889999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhh
Q psy12288 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348 (393)
Q Consensus 269 SlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (393)
|||+++|+|++|+.||....... ....+... .....
T Consensus 179 slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~-----------------------------------------~~~~~ 214 (277)
T cd05577 179 ALGCTLYEMIAGRSPFRQRKEKV---EKEELKRR-----------------------------------------TLEMA 214 (277)
T ss_pred HHHHHHHHHhhCCCCCCCCcccc---cHHHHHhc-----------------------------------------ccccc
Confidence 99999999999999997544211 01110000 00011
Q ss_pred ccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 349 YHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 349 ~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
...+...+..+.++|++||..||.+|| ++.++++||||+..
T Consensus 215 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 215 VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 112334567888999999999999999 89999999999764
No 218
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.5e-37 Score=283.11 Aligned_cols=249 Identities=22% Similarity=0.371 Sum_probs=189.8
Q ss_pred EecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 35 KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
.||+|+||.||++.+..+++.+|+|.+...... .....+|..+++.+.. ..|++++.+.+.+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~-- 67 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-----------GDCPFIVCMTYAFH-- 67 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh-----------CCCCcEeEEEEEEe--
Confidence 489999999999999999999999988654221 1223344444444421 26888988888776
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhh
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~ 189 (393)
.++..++||||+ +++|...+... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 68 --~~~~~~lv~e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dikp~Nil~~~~~-------- 134 (279)
T cd05633 68 --TPDKLCFILDLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNR-FVVYRDLKPANILLDEHG-------- 134 (279)
T ss_pred --cCCeEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcCCCCCCHHHEEECCCC--------
Confidence 566799999999 67887776554 3489999999999999999999998 999999999999997665
Q ss_pred hhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhc-CCCCchhhH
Q psy12288 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIG-AGYGPAADI 267 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~-~~~~~~~Di 267 (393)
.++|+|||++...... .....++..|+|||.+.+ ..++.++|+
T Consensus 135 -----------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 179 (279)
T cd05633 135 -----------------------------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADW 179 (279)
T ss_pred -----------------------------------CEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhh
Confidence 4999999998755332 223468999999999874 457899999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
||+||++|+|++|..||....... ...+..... ..
T Consensus 180 ~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~-----------------------------------------~~ 214 (279)
T cd05633 180 FSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTL-----------------------------------------TV 214 (279)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCcC----HHHHHHHhh-----------------------------------------cC
Confidence 999999999999999997543211 111111100 00
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
...++...+..+.++|.+||..||.+|| +++++++||||++.
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence 1112344567888999999999999999 69999999999985
No 219
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.8e-37 Score=280.34 Aligned_cols=247 Identities=18% Similarity=0.244 Sum_probs=197.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.+|++.++||+|++|.||+|....+++.||+|.+..+......+.+|+.+++.+ .|++++++++.+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~ 71 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI--------------KHPNLVQLLGVC 71 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhC--------------CCCChhheEEEE
Confidence 469999999999999999999999999999999886554456788899999998 789999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. ....++++|||+ +++|.+.+.......++...+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 72 ~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~nil~~~~~----- 141 (263)
T cd05052 72 T----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENH----- 141 (263)
T ss_pred c----CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCC-----
Confidence 6 556789999999 78888888665445588899999999999999999998 999999999999997665
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----CCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----DEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++........ ...++..|+|||.+.+..++
T Consensus 142 --------------------------------------~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 183 (263)
T cd05052 142 --------------------------------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 183 (263)
T ss_pred --------------------------------------cEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCC
Confidence 499999999876543211 12235679999999988899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|||||||++|+|++ |..||.+... ......+.. +.
T Consensus 184 ~~~Dv~slG~il~el~t~g~~p~~~~~~------~~~~~~~~~--~~--------------------------------- 222 (263)
T cd05052 184 IKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVYELLEK--GY--------------------------------- 222 (263)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHC--CC---------------------------------
Confidence 99999999999999998 9999965431 111111100 00
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..||.+|||+.++++.
T Consensus 223 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 223 ------RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 011223456788999999999999999999999864
No 220
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3e-37 Score=287.05 Aligned_cols=254 Identities=19% Similarity=0.294 Sum_probs=189.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC----------------CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCC
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ----------------DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVH 88 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~ 88 (393)
.++|++.++||+|+||.||+|.+.. ++..||+|.+.... .....+.+|+.+++.+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------- 76 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL------- 76 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-------
Confidence 4689999999999999999997532 34479999887532 2234678899999998
Q ss_pred cccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC-----------------CCCCCHHHHHHHHH
Q psy12288 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-----------------YKGIHIQNVRTIIK 150 (393)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----------------~~~l~~~~~~~i~~ 150 (393)
.|+|++++++.+. .....++||||+ +++|.+++.... ...++...+..++.
T Consensus 77 -------~h~niv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 145 (304)
T cd05096 77 -------KDPNIIRLLGVCV----DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVAL 145 (304)
T ss_pred -------CCCCeeEEEEEEe----cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHH
Confidence 8899999999887 456789999999 778888775421 12356778899999
Q ss_pred HHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEee
Q psy12288 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230 (393)
Q Consensus 151 ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~d 230 (393)
|++.||+|||+. |++||||||+||+++.++ .++|+|
T Consensus 146 ~i~~al~~lH~~-~ivH~dlkp~Nill~~~~-------------------------------------------~~kl~D 181 (304)
T cd05096 146 QIASGMKYLSSL-NFVHRDLATRNCLVGENL-------------------------------------------TIKIAD 181 (304)
T ss_pred HHHHHHHHHHHC-CccccCcchhheEEcCCc-------------------------------------------cEEECC
Confidence 999999999998 999999999999998766 499999
Q ss_pred cCccccccCC-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCCCCCCCcHHHHHHHH
Q psy12288 231 LGNACWIDDH-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT--GDYLFDPKAGKEYSRDDDHLAHIV 303 (393)
Q Consensus 231 fg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~--g~~pf~~~~~~~~~~~~~~~~~~~ 303 (393)
||++...... .....++..|+|||++.+..++.++||||||+++|+|++ +..||...+. ...+..+.
T Consensus 182 fG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~------~~~~~~~~ 255 (304)
T cd05096 182 FGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTD------EQVIENAG 255 (304)
T ss_pred CccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCH------HHHHHHHH
Confidence 9998754322 112334778999999998889999999999999999986 5677765431 11111111
Q ss_pred HHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 304 ELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 304 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....... .. .....+..++..+.++|.+||..||++|||+.++.+
T Consensus 256 ~~~~~~~--------~~--------------------------~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 256 EFFRDQG--------RQ--------------------------VYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred HHhhhcc--------cc--------------------------ccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 1100000 00 000012345568899999999999999999999954
No 221
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.2e-37 Score=284.14 Aligned_cols=251 Identities=26% Similarity=0.408 Sum_probs=202.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..|+..+.||.|+||.||.|.+..++..||+|.+.... .....+.+|+.+++.+ .|++++++++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 69 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC--------------DSPYVTKYYG 69 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC--------------CCCCEeeEEE
Confidence 36888999999999999999999999999999887432 2345677888888888 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|.+.+... .++...+..++.|++.|+++||+. +++|+||+|+||+++.++
T Consensus 70 ~~~----~~~~~~lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~-~ivH~dl~p~Nil~~~~~--- 138 (277)
T cd06640 70 SYL----KGTKLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSE-KKIHRDIKAANVLLSEQG--- 138 (277)
T ss_pred EEE----ECCEEEEEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-CccCcCCChhhEEEcCCC---
Confidence 887 567899999999 67888777543 478899999999999999999998 999999999999998765
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||++....... ....++..|+|||.+.+..+
T Consensus 139 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~ 178 (277)
T cd06640 139 ----------------------------------------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAY 178 (277)
T ss_pred ----------------------------------------CEEEcccccceeccCCccccccccCcccccCHhHhccCCC
Confidence 49999999986553321 22356788999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||....... ....+ . .+.
T Consensus 179 ~~~~Dv~slG~il~el~tg~~p~~~~~~~~------~~~~~-~-~~~--------------------------------- 217 (277)
T cd06640 179 DSKADIWSLGITAIELAKGEPPNSDMHPMR------VLFLI-P-KNN--------------------------------- 217 (277)
T ss_pred ccHHHHHHHHHHHHHHHHCCCCCCCcChHh------Hhhhh-h-cCC---------------------------------
Confidence 999999999999999999999996543211 00000 0 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+....+..+.+++.+||..+|.+||++.+++.||||....
T Consensus 218 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 218 ------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred ------CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 0012245667888999999999999999999999999998754
No 222
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=8.9e-38 Score=288.24 Aligned_cols=260 Identities=20% Similarity=0.315 Sum_probs=197.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|+..++||+|+||.||++.+..+++.||+|.+.... .....+.+|+.++..+. .|+|++++++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~-------------~~~~iv~~~~ 70 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS-------------DCPYIVKFYG 70 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc-------------CCCCEeeeee
Confidence 35677789999999999999999999999999886432 22345677888888772 4899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHH---HhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLI---ARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~---~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+. .....+++||+++.++.++. .......+++..+..++.|++.||+|||+..+++||||||+||+++.++
T Consensus 71 ~~~----~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~- 145 (288)
T cd06616 71 ALF----REGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG- 145 (288)
T ss_pred EEe----cCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC-
Confidence 876 45668899999976655433 2222345899999999999999999999755999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcC-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA- 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~- 259 (393)
.++|+|||++...... .....++..|+|||.+.+.
T Consensus 146 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 183 (288)
T cd06616 146 ------------------------------------------NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 183 (288)
T ss_pred ------------------------------------------cEEEeecchhHHhccCCccccccCccCccCHHHhcccc
Confidence 4999999998754332 2334678899999999876
Q ss_pred --CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHh-CCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 260 --GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV-GPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 260 --~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.++.++|+||||+++|+|++|+.||.... .....+.... +..|. ..
T Consensus 184 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~~~~-~~---------------------- 232 (288)
T cd06616 184 RDGYDVRSDVWSLGITLYEVATGKFPYPKWN--------SVFDQLTQVVKGDPPI-LS---------------------- 232 (288)
T ss_pred ccCCcchhhhhHHHHHHHHHHhCCCCchhcc--------hHHHHHhhhcCCCCCc-CC----------------------
Confidence 57899999999999999999999996432 1111111111 11111 00
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+...+..+.+||.+||..||++|||++++++||||+...
T Consensus 233 ------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 233 ------------NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred ------------CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 001123567889999999999999999999999999998643
No 223
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.4e-37 Score=287.71 Aligned_cols=258 Identities=27% Similarity=0.455 Sum_probs=203.7
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+|+. .++|++.+.||+|+||.||++.+..++..|++|.+... ....+.+.+|+.+++.+ .|+|+
T Consensus 14 ~~~~-~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~hp~i 78 (293)
T cd06647 14 VGDP-KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN--------------KHPNI 78 (293)
T ss_pred ccCc-hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc--------------CCCCe
Confidence 3444 36999999999999999999999989999999987643 22345677888888888 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+.+. .....++|+||+ ++++.+.+... .++..++..++.|++.|+++||++ |++|+||+|+||+++.
T Consensus 79 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~-gi~H~dL~p~Nili~~ 150 (293)
T cd06647 79 VNYLDSYL----VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGM 150 (293)
T ss_pred eehhheee----eCCcEEEEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC-CEeeccCCHHHEEEcC
Confidence 99999887 456789999999 77888777543 378889999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~ 256 (393)
++ .++|+|||++...... .....+++.|++||.+
T Consensus 151 ~~-------------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~ 187 (293)
T cd06647 151 DG-------------------------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187 (293)
T ss_pred CC-------------------------------------------CEEEccCcceecccccccccccccCChhhcCchhh
Confidence 65 4999999987654322 2234578889999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
....++.++|+||||+++|++++|+.||...+... .+..+.. +..|
T Consensus 188 ~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~------~~~~~~~--~~~~-------------------------- 233 (293)
T cd06647 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR------ALYLIAT--NGTP-------------------------- 233 (293)
T ss_pred ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh------heeehhc--CCCC--------------------------
Confidence 88888999999999999999999999997544211 0000000 0000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+...+..+.++|++||..+|++||++.+++.||||+..+
T Consensus 234 -----------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 234 -----------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred -----------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 0001123456788999999999999999999999999999876
No 224
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.1e-37 Score=279.45 Aligned_cols=246 Identities=23% Similarity=0.378 Sum_probs=197.9
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+|++.++||+|+||.||++.+..++..+|+|.+... ....+.+.+|+.+++.+ .|+|++++.+.
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~ 66 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM--------------KHPNIVAFKES 66 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC--------------CCCCcceEEEE
Confidence 589999999999999999999999999999988642 23346677888899888 78999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+..++++|||+ ++++.+.+.......++.+.+..++.|++.||.+||++ |++|+||||+||+++.++
T Consensus 67 ~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dl~p~nili~~~~---- 137 (255)
T cd08219 67 FE----ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK-RVLHRDIKSKNIFLTQNG---- 137 (255)
T ss_pred EE----ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEECCCC----
Confidence 87 667899999999 77888887655445588999999999999999999998 999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++++|||.+...... .....+++.|+|||++.+..++
T Consensus 138 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 178 (255)
T cd08219 138 ---------------------------------------KVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYN 178 (255)
T ss_pred ---------------------------------------cEEEcccCcceeecccccccccccCCccccCHHHHccCCcC
Confidence 4999999998755332 2234678899999999988899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|..||...+. ......+. .+..
T Consensus 179 ~~~Dv~slG~i~~~l~~g~~p~~~~~~------~~~~~~~~--~~~~--------------------------------- 217 (255)
T cd08219 179 NKSDIWSLGCILYELCTLKHPFQANSW------KNLILKVC--QGSY--------------------------------- 217 (255)
T ss_pred chhhhhhhchhheehhhccCCCCCCCH------HHHHHHHh--cCCC---------------------------------
Confidence 999999999999999999999965431 11111110 0100
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||..||.+|||+.+++.-
T Consensus 218 ------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 ------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00123345678899999999999999999999864
No 225
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=4e-37 Score=283.59 Aligned_cols=254 Identities=24% Similarity=0.382 Sum_probs=201.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..|+...+||+|++|.||++.+..+++.+++|.+.... ...+.+.+|+.+++.+ .|+|++++++.
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~vv~~~~~ 84 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY--------------QHPNIVEMYSS 84 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc--------------CCCChheEEEE
Confidence 35666789999999999999999999999999876432 2234567899999988 78999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+.+.++++||+ +++|.+.+.. ..++.+.+..++.|++.||++||++ |++||||+|+||+++.++
T Consensus 85 ~~----~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~dl~p~Nil~~~~~---- 152 (285)
T cd06648 85 YL----VGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILLTSDG---- 152 (285)
T ss_pred EE----cCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChhhEEEcCCC----
Confidence 76 567799999999 7788877765 3488999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+...... .....++..|+|||.+.+..++
T Consensus 153 ---------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 193 (285)
T cd06648 153 ---------------------------------------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYG 193 (285)
T ss_pred ---------------------------------------cEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCC
Confidence 4999999987644322 2234578899999999888899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||+|+++|+|++|+.||...+. ......+.. ..+.
T Consensus 194 ~~~Dv~slGv~l~ell~g~~p~~~~~~------~~~~~~~~~---~~~~------------------------------- 233 (285)
T cd06648 194 TEVDIWSLGIMVIEMVDGEPPYFNEPP------LQAMKRIRD---NLPP------------------------------- 233 (285)
T ss_pred CcccHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHh---cCCC-------------------------------
Confidence 999999999999999999999965331 111111111 0000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
........+..+.++|++||..+|.+|||+.++++||||++...
T Consensus 234 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 234 -----KLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred -----CCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 00001224567899999999999999999999999999988764
No 226
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.3e-37 Score=278.93 Aligned_cols=251 Identities=25% Similarity=0.385 Sum_probs=200.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||.|+||.||+|.+..++..||+|.+..+. ...+.+.+|+.+++.+ .|+|++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL--------------KHPNIVRYYD 66 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc--------------CCCccceeee
Confidence 5899999999999999999999999999999886432 2234567789999998 7899999888
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhh-----hcCCeeeccCCCCceEE
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLH-----TQCRIIHTDIKPENILM 177 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH-----~~~~i~H~dlkp~NIl~ 177 (393)
.+.. ..+...+++|||+ +++|.+.+... ....+++..+..++.|++.||++|| +. +++|+||+|+||++
T Consensus 67 ~~~~--~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~-~i~h~dl~p~nili 143 (265)
T cd08217 67 RIID--RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN-TVLHRDLKPANIFL 143 (265)
T ss_pred eeec--CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC-cceecCCCHHHEEE
Confidence 7652 2456789999999 67888777543 2345889999999999999999999 87 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVE 254 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE 254 (393)
+.++ .++|+|||.+...... .....++..|+|||
T Consensus 144 ~~~~-------------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE 180 (265)
T cd08217 144 DANN-------------------------------------------NVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPE 180 (265)
T ss_pred ecCC-------------------------------------------CEEEecccccccccCCcccccccccCCCccChh
Confidence 8766 4999999998765432 22346789999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+.+..++.++|+||||+++|+|++|..||.... .......+.. +..
T Consensus 181 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~------------------------- 227 (265)
T cd08217 181 QLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN------QLQLASKIKE--GKF------------------------- 227 (265)
T ss_pred hhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC------HHHHHHHHhc--CCC-------------------------
Confidence 9998888999999999999999999999996543 1111111100 000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..++...+..+.+++.+||..+|.+|||+.++++|||+
T Consensus 228 --------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 228 --------------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred --------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 01223455788899999999999999999999999996
No 227
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.7e-37 Score=280.83 Aligned_cols=245 Identities=20% Similarity=0.334 Sum_probs=194.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.++||+|++|.||+|... ++..||+|.+.......+.+.+|+.+++.+ .|+|++++.+.+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~ 70 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTL--------------QHDKLVRLYAVV 70 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhC--------------CCCCeeeEEEEE
Confidence 58999999999999999999864 556799998876555567788999999998 789999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....+++||++ +++|.+++.......++...+..++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 71 ~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nili~~~~----- 140 (261)
T cd05072 71 T----KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLVSESL----- 140 (261)
T ss_pred c----CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEecCCC-----
Confidence 6 566789999999 78998888765545688899999999999999999998 999999999999998765
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++....... ....++..|+|||.+.+..++
T Consensus 141 --------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 182 (261)
T cd05072 141 --------------------------------------MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 182 (261)
T ss_pred --------------------------------------cEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCC
Confidence 48999999987654321 122346679999999888889
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |..||..... ......+.. ..+
T Consensus 183 ~~~Di~slG~~l~~l~t~g~~p~~~~~~------~~~~~~~~~---~~~------------------------------- 222 (261)
T cd05072 183 IKSDVWSFGILLYEIVTYGKIPYPGMSN------SDVMSALQR---GYR------------------------------- 222 (261)
T ss_pred hhhhhhhhHHHHHHHHccCCCCCCCCCH------HHHHHHHHc---CCC-------------------------------
Confidence 99999999999999998 9999965431 111111110 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.....+..+.+++.+||..+|++||+++++++
T Consensus 223 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 223 -------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0011234567889999999999999999999875
No 228
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.9e-38 Score=294.96 Aligned_cols=288 Identities=21% Similarity=0.248 Sum_probs=194.7
Q ss_pred EEeccc--CceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWG--HFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
..||.| +||.||+|.+..+++.||+|++..... ..+.+.+|+.+++.+ .|+|++++++.|.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~niv~~~~~~~ 69 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF--------------RHPNIMTSWTVFT 69 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCCCcceEeeeEe
Confidence 456666 999999999999999999999874322 235567888888877 8999999999987
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.+...+++||++ ++++.+++.......+++..+..++.|++.||+|||+. |++||||||+||+++.++
T Consensus 70 ----~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivHrDlkp~Nill~~~~------ 138 (328)
T cd08226 70 ----TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN-GYIHRNIKASHILISGDG------ 138 (328)
T ss_pred ----cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEeCCC------
Confidence 567799999999 67888877665444588999999999999999999998 999999999999998766
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhHHHh
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE~~~ 257 (393)
.++++||+.+...... .....++..|++||++.
T Consensus 139 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 181 (328)
T cd08226 139 -------------------------------------LVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLR 181 (328)
T ss_pred -------------------------------------cEEEechHHHhhhhccCccccccccccccccCccCccChhhhc
Confidence 3888888754322110 01122456799999997
Q ss_pred cC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee---
Q psy12288 258 GA--GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR--- 332 (393)
Q Consensus 258 ~~--~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 332 (393)
+. .++.++|+|||||++|+|++|+.||..... ...+..........|......................
T Consensus 182 ~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (328)
T cd08226 182 QDLYGYNVKSDIYSVGITACELATGRVPFQDMLR------TQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIG 255 (328)
T ss_pred CCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcCh------HHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccc
Confidence 64 478999999999999999999999975431 1122222111111111000000000000000000000
Q ss_pred -ccCCCcchhHHHH--hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 333 -IDNLKPWGLYQVL--TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 333 -~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
......+. .... ......+..++..+.+||++||+.||++|||++|+++||||++..
T Consensus 256 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 256 ESVVAAGMT-QTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred cchhccccc-cccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 00000000 0000 000112245678899999999999999999999999999998654
No 229
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.8e-37 Score=281.59 Aligned_cols=252 Identities=25% Similarity=0.347 Sum_probs=195.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc-----------chhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-----------ADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
+|.+.+.||+|++|.||+|.+..+++.+|+|.++..... .+.+.+|+.+++.+ .|
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h 67 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL--------------DH 67 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc--------------CC
Confidence 689999999999999999999989999999987532111 13466788888888 78
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
++++++++.+. .....++||||+ +++|.+.+... ..++...+..++.|++.||.+||++ +++|+||+|+||+
T Consensus 68 ~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~~~nil 140 (272)
T cd06629 68 LNIVQYLGFET----TEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLL 140 (272)
T ss_pred CCcceEEEEec----cCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC-CeeecCCChhhEE
Confidence 99999988776 566789999999 77888877664 4588999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCc
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYR 251 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~ 251 (393)
++.++ .++++|||++...... .....++..|+
T Consensus 141 ~~~~~-------------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~ 177 (272)
T cd06629 141 VDADG-------------------------------------------ICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177 (272)
T ss_pred EcCCC-------------------------------------------eEEEeeccccccccccccccccccccCCcccc
Confidence 98665 4999999988754321 12235688999
Q ss_pred hhHHHhcCC--CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 252 SVEVLIGAG--YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 252 aPE~~~~~~--~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|||.+.... ++.++|+||||+++|++++|..||..... . .......... .....
T Consensus 178 ~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~---~~~~~~~~~~---------~~~~~------ 233 (272)
T cd06629 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA------I---AAMFKLGNKR---------SAPPI------ 233 (272)
T ss_pred CHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch------H---HHHHHhhccc---------cCCcC------
Confidence 999988754 78999999999999999999999953321 1 1111110000 00000
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
........+..+.++|.+||..||.+|||++++++||||
T Consensus 234 ------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 234 ------------------PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ------------------CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 000112346788899999999999999999999999997
No 230
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.1e-37 Score=287.20 Aligned_cols=252 Identities=24% Similarity=0.405 Sum_probs=198.8
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.|+....||+|+||.||+|.+..+++.||+|.+... ....+.+.+|+.+++.+ .|+|++++++.+
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~hp~i~~~~~~~ 87 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY--------------QHQNVVEMYKSY 87 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC--------------CCCchhhhhhhe
Confidence 455667899999999999999999999999988643 22345677888888888 899999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+...++++||+ ++++...+.. ..+++..+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 88 ~----~~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dl~p~Nill~~~~----- 154 (297)
T cd06659 88 L----VGEELWVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILLTLDG----- 154 (297)
T ss_pred e----eCCeEEEEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHeEEccCC-----
Confidence 7 567799999999 5677665543 3488999999999999999999998 999999999999998776
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....++..|+|||++.+..++.
T Consensus 155 --------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 196 (297)
T cd06659 155 --------------------------------------RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGT 196 (297)
T ss_pred --------------------------------------cEEEeechhHhhcccccccccceecCccccCHHHHccCCCCc
Confidence 4999999988654322 22346789999999999888999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+|||||++|+|++|+.||.... ....+..+ .+..+..
T Consensus 197 ~~Dv~slG~il~el~~g~~p~~~~~------~~~~~~~~---~~~~~~~------------------------------- 236 (297)
T cd06659 197 EVDIWSLGIMVIEMVDGEPPYFSDS------PVQAMKRL---RDSPPPK------------------------------- 236 (297)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH---hccCCCC-------------------------------
Confidence 9999999999999999999996433 11221111 1110000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.......+..+.++|++||..+|.+||+++++++||||.+..
T Consensus 237 -----~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~ 278 (297)
T cd06659 237 -----LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTG 278 (297)
T ss_pred -----ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCC
Confidence 000122345678999999999999999999999999998764
No 231
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.4e-37 Score=293.55 Aligned_cols=289 Identities=30% Similarity=0.486 Sum_probs=215.0
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..+.++|++.+.||+|+||.||+|.+..+++.+|+|.+... ......+.+|+.+++.+. .|+|+
T Consensus 3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~ni 69 (337)
T cd07852 3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG-------------DHPNI 69 (337)
T ss_pred chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc-------------CCCCc
Confidence 34667999999999999999999999989999999987532 222345667899888883 68899
Q ss_pred eeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++++.+.. .++...++|||+++++|...+... .+++..+..++.|++.||++||+. |++|+||+|+||+++.+
T Consensus 70 ~~~~~~~~~--~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~-~i~H~dl~p~nill~~~ 143 (337)
T cd07852 70 VKLLNVIKA--ENDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG-NVIHRDLKPSNILLNSD 143 (337)
T ss_pred cceeeeecc--CCCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCC
Confidence 999987752 234568999999988988887654 478888899999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--------CCCCCCCCCCch
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--------FADEIQTRQYRS 252 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--------~~~~~~t~~y~a 252 (393)
+ .++|+|||.+...... .....++..|+|
T Consensus 144 ~-------------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~a 180 (337)
T cd07852 144 C-------------------------------------------RVKLADFGLARSLSELEENPENPVLTDYVATRWYRA 180 (337)
T ss_pred C-------------------------------------------cEEEeeccchhccccccccccCcchhcccccccccC
Confidence 6 4999999988754321 123457889999
Q ss_pred hHHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 253 VEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 253 PE~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
||.+.+. .++.++|+||||+++|+|++|+.||.+.. .......+....+..+...+......... ....
T Consensus 181 PE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 250 (337)
T cd07852 181 PEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTS------TLNQLEKIIEVIGPPSAEDIESIKSPFAA----TMLD 250 (337)
T ss_pred ceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHHHhhhHH----Hhhh
Confidence 9988654 47889999999999999999999997654 44556666666666555443322110000 0000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
......... . .......+..+.++|.+||..||.+|||+.++++||||+++..
T Consensus 251 ~~~~~~~~~----~---~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 251 SLPSRPRKP----L---DELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred hcccccccc----h---hhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence 000000000 0 0011225678899999999999999999999999999988754
No 232
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.4e-37 Score=281.20 Aligned_cols=245 Identities=15% Similarity=0.214 Sum_probs=189.0
Q ss_pred CeEEEEEEecccCceEEEEEEeC---CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.+|++.+.||+|+||.||+|.+. ..+..||+|.++.... ....+.+|+..++.+ .|+|+++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~ 70 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF--------------DHSNIVR 70 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC--------------CCCCcCe
Confidence 57999999999999999999765 3456899999875432 224567788888887 7999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. .+.+.++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 71 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~-~iiH~dikp~nili~~~~ 144 (266)
T cd05064 71 LEGVIT----RGNTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLVNSDL 144 (266)
T ss_pred EEEEEe----cCCCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeeccccHhhEEEcCCC
Confidence 998876 567799999999 556666665432 4588999999999999999999998 999999999999997765
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHh
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~ 257 (393)
.++++|||.+...... .....++..|+|||.+.
T Consensus 145 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 181 (266)
T cd05064 145 -------------------------------------------VCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQ 181 (266)
T ss_pred -------------------------------------------cEEECCCcccccccccchhcccCCCCceeecCHHHHh
Confidence 4899999976543221 11223457899999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
+..++.++|||||||++|++++ |..||...+. .+.+..+.. +.
T Consensus 182 ~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~------~~~~~~~~~--~~---------------------------- 225 (266)
T cd05064 182 YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG------QDVIKAVED--GF---------------------------- 225 (266)
T ss_pred hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH------HHHHHHHHC--CC----------------------------
Confidence 9889999999999999999775 9999975441 111111111 00
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.+++.+||..+|.+||+++++++
T Consensus 226 -----------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 226 -----------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -----------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 00112345567889999999999999999999875
No 233
>KOG4236|consensus
Probab=100.00 E-value=8.5e-39 Score=295.35 Aligned_cols=256 Identities=25% Similarity=0.422 Sum_probs=213.2
Q ss_pred CeEEEE--EEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVI--RKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.-|++. ++||+|.||.||-|.++.+|+.||||++.+. ......+++|+.+|+.+ .||.|+.
T Consensus 562 tvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l--------------~HPGiV~ 627 (888)
T KOG4236|consen 562 TVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL--------------HHPGIVN 627 (888)
T ss_pred HHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc--------------CCCCeeE
Confidence 346654 5899999999999999999999999988642 23346789999999999 8899999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+...|+ ....+++|||-+.|+.++.+.....+.+++.....++.||+.||.|||.+ +|+|+||||+|||+.....
T Consensus 628 le~M~E----T~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k-nIvHCDLKPENVLLas~~~ 702 (888)
T KOG4236|consen 628 LECMFE----TPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK-NIVHCDLKPENVLLASASP 702 (888)
T ss_pred EEEeec----CCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc-ceeeccCCchheeeccCCC
Confidence 888887 66779999999999999999888888899999999999999999999998 9999999999999975542
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~ 260 (393)
-..+||||||+|+.++.. ....+||+.|.|||++...+
T Consensus 703 ----------------------------------------FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkG 742 (888)
T KOG4236|consen 703 ----------------------------------------FPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKG 742 (888)
T ss_pred ----------------------------------------CCceeeccccceeecchhhhhhhhcCCccccCHHHHhhcc
Confidence 125999999999988754 44568999999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|.++.|+||+|||+|.-++|..||..... -.++++... -+=...+
T Consensus 743 yNrSLDMWSVGVIiYVsLSGTFPFNEdEd-----IndQIQNAa----------------------------FMyPp~P-- 787 (888)
T KOG4236|consen 743 YNRSLDMWSVGVIIYVSLSGTFPFNEDED-----INDQIQNAA----------------------------FMYPPNP-- 787 (888)
T ss_pred ccccccceeeeEEEEEEecccccCCCccc-----hhHHhhccc----------------------------cccCCCc--
Confidence 99999999999999999999999964321 111111100 0001111
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+.+.+..++|||..+|+..=++|.+++..+.|||+.+
T Consensus 788 -----------W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 788 -----------WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred -----------hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 2678889999999999999999999999999999976
No 234
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.1e-37 Score=285.27 Aligned_cols=260 Identities=24% Similarity=0.308 Sum_probs=201.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+|++++++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 70 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC--------------RSPYIVSFYG 70 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc--------------CCCCcceEee
Confidence 57999999999999999999999999999999876432 2345678899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ....+++||||+ +++|...+... +.++...+..++.+++.||.|||+..+++|+||+|+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--- 141 (284)
T cd06620 71 AFL----NENNICMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG--- 141 (284)
T ss_pred eEe----cCCEEEEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC---
Confidence 987 557899999999 66777666553 34889999999999999999999744899999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....++..|+|||++.+..++.
T Consensus 142 ----------------------------------------~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 181 (284)
T cd06620 142 ----------------------------------------QIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTV 181 (284)
T ss_pred ----------------------------------------cEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCc
Confidence 4999999987654322 22346789999999998888899
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCC--cHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSR--DDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
++|+|||||++|++++|..||.......... ...............
T Consensus 182 ~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 229 (284)
T cd06620 182 KSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-------------------------------- 229 (284)
T ss_pred cchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc--------------------------------
Confidence 9999999999999999999997654321100 000000000000000
Q ss_pred HHHHhhhccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
...++ ...+..+.+|+.+||..||.+|||+.|+++||||..
T Consensus 230 ------~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 230 ------PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred ------CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 00011 124567889999999999999999999999998854
No 235
>KOG0586|consensus
Probab=100.00 E-value=8e-38 Score=295.15 Aligned_cols=251 Identities=26% Similarity=0.468 Sum_probs=216.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc---chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
..|.+.++||.|.|+.|.+|.+..++..||||++.++... .+.+.+|+.+|+.+ .||||++++
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l--------------~HPnIvkl~ 121 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL--------------NHPNIVKLF 121 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc--------------CCcceeeee
Confidence 4799999999999999999999999999999998765433 45678999999999 999999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+.. ....+++||||+ ++.+++++.+.. .+.+.+++.++.|+..|++|||++ +|||||||++|||++.+.+
T Consensus 122 ~v~~----t~~~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k-~ivHrdLk~eNilL~~~mn- 193 (596)
T KOG0586|consen 122 SVIE----TEATLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSK-NIVHRDLKAENILLDENMN- 193 (596)
T ss_pred eeee----ecceeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhc-ceeccccchhhcccccccc-
Confidence 9887 567799999999 999999998763 477799999999999999999999 9999999999999998874
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
+|++|||++..+. ......+|++.|.|||++.+..|
T Consensus 194 ------------------------------------------ikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y 231 (596)
T KOG0586|consen 194 ------------------------------------------IKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKY 231 (596)
T ss_pred ------------------------------------------eeeeccccceeecccccccccCCCCCccChHhhcCccc
Confidence 9999999987654 44567889999999999999887
Q ss_pred -CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 -GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 -~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.+|+||+|+++|.|++|..||.+.+.++...
T Consensus 232 ~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~---------------------------------------------- 265 (596)
T KOG0586|consen 232 DGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRP---------------------------------------------- 265 (596)
T ss_pred CCcceehhhhhhhheeeeecccccCCcccccccc----------------------------------------------
Confidence 889999999999999999999998776544311
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+..++..+-..+.+..++|+++|..+|.+|++.+++..|.|++...
T Consensus 266 --rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~ 313 (596)
T KOG0586|consen 266 --RVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLL 313 (596)
T ss_pred --hheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhh
Confidence 222333444455667778999999999999999999999999987643
No 236
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1e-36 Score=277.29 Aligned_cols=250 Identities=27% Similarity=0.429 Sum_probs=198.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.|++|.++.... ....+.+|+.+++.+ .|++++++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l--------------~~~~i~~~~~ 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL--------------KHPNLVKYYG 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC--------------CCCChhheee
Confidence 68999999999999999999999999999999876543 346678899999998 7889999888
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ....+++|+||+ +++|.+.+... ..++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~~~nil~~~~~--- 136 (264)
T cd06626 67 VEV----HREKVYIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSH-GIVHRDIKPANIFLDHNG--- 136 (264)
T ss_pred eEe----cCCEEEEEEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC---
Confidence 765 567899999999 67888877654 3378889999999999999999998 999999999999998765
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-------CCCCCCCCCchhHHHh
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-------ADEIQTRQYRSVEVLI 257 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-------~~~~~t~~y~aPE~~~ 257 (393)
.++|+|||++....... ....++..|++||++.
T Consensus 137 ----------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~ 176 (264)
T cd06626 137 ----------------------------------------VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVIT 176 (264)
T ss_pred ----------------------------------------CEEEcccccccccCCCCCcccccccCCcCCcCccChhhcc
Confidence 49999999887653221 1235678999999998
Q ss_pred cCC---CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 258 GAG---YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 258 ~~~---~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.. .+.++|+||||+++|++++|..||..... .......... +..+.
T Consensus 177 ~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~------~~~~~~~~~~-~~~~~----------------------- 226 (264)
T cd06626 177 GGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN------EFQIMFHVGA-GHKPP----------------------- 226 (264)
T ss_pred CCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc------hHHHHHHHhc-CCCCC-----------------------
Confidence 766 78999999999999999999999965431 1111111000 11000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.+.....+..+.++|.+||..||.+|||+.|++.|||+
T Consensus 227 --------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 227 --------------IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred --------------CCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00011235677899999999999999999999999996
No 237
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.5e-37 Score=295.42 Aligned_cols=250 Identities=17% Similarity=0.260 Sum_probs=191.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|.+..+ +..||+|.++... ...+.+.+|+.+++.+. .|+|
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~-------------~h~n 103 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG-------------QHKN 103 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc-------------cCCc
Confidence 56899999999999999999986544 3579999987532 22345678999998883 6899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
|+++++.+. .....++||||+ +++|.+++....
T Consensus 104 Iv~~~~~~~----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (374)
T cd05106 104 IVNLLGACT----HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSD 179 (374)
T ss_pred eeeEeeEec----CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccc
Confidence 999999886 566799999999 788888774321
Q ss_pred --------------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 137 --------------------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 137 --------------------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
...++...+..++.|++.||+|||++ |++||||||+||+++.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-giiHrDLkp~Nil~~~~~--------- 249 (374)
T cd05106 180 TYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-NCIHRDVAARNVLLTDGR--------- 249 (374)
T ss_pred cccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CEEeccCchheEEEeCCC---------
Confidence 12367788999999999999999998 999999999999998665
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhHHHhcCCCCchh
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++........ ...++..|+|||++.+..++.++
T Consensus 250 ----------------------------------~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 295 (374)
T cd05106 250 ----------------------------------VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQS 295 (374)
T ss_pred ----------------------------------eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccc
Confidence 599999999875432211 12245679999999988899999
Q ss_pred hHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 266 DIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 266 DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
|||||||++|+|++ |+.||...... ......... +.
T Consensus 296 DvwSlGvil~ellt~G~~Pf~~~~~~------~~~~~~~~~-~~------------------------------------ 332 (374)
T cd05106 296 DVWSYGILLWEIFSLGKSPYPGILVN------SKFYKMVKR-GY------------------------------------ 332 (374)
T ss_pred cHHHHHHHHHHHHhCCCCCCcccccc------HHHHHHHHc-cc------------------------------------
Confidence 99999999999997 99999754311 111111110 00
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||+.++++.
T Consensus 333 ---~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 333 ---QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred ---CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000112235678899999999999999999998763
No 238
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.9e-38 Score=289.06 Aligned_cols=252 Identities=26% Similarity=0.409 Sum_probs=200.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.|+..+.||+|+||.||+|.+..++..||+|.+.... ...+.+.+|+.+++.+ .|+|++++.+
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 69 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC--------------DSPYITRYYG 69 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC--------------CCCccHhhhc
Confidence 35777888999999999999999999999999886432 2335678899999988 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ ++++.+.+.. ..+++..+..++.|++.|+.|||++ +++|+||+|+||+++.++
T Consensus 70 ~~~----~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~-~ivH~dl~p~ni~i~~~~--- 138 (277)
T cd06642 70 SYL----KGTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQG--- 138 (277)
T ss_pred ccc----cCCceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC-CeeccCCChheEEEeCCC---
Confidence 887 567799999999 6677776643 3488999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||++....... ....++..|+|||.+.+..+
T Consensus 139 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 178 (277)
T cd06642 139 ----------------------------------------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 178 (277)
T ss_pred ----------------------------------------CEEEccccccccccCcchhhhcccCcccccCHHHhCcCCC
Confidence 49999999987554321 22356888999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||....... .... .....
T Consensus 179 ~~~~Dv~slG~il~el~tg~~p~~~~~~~~------~~~~---~~~~~-------------------------------- 217 (277)
T cd06642 179 DFKADIWSLGITAIELAKGEPPNSDLHPMR------VLFL---IPKNS-------------------------------- 217 (277)
T ss_pred chhhhHHHHHHHHHHHHhCCCCCcccchhh------HHhh---hhcCC--------------------------------
Confidence 999999999999999999999986433111 0000 00000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
...+....+..+.+++.+||..+|.+||++.++++||||+....
T Consensus 218 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06642 218 ------PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTK 261 (277)
T ss_pred ------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhh
Confidence 00012334567889999999999999999999999999986544
No 239
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=8.5e-37 Score=280.39 Aligned_cols=250 Identities=22% Similarity=0.369 Sum_probs=191.5
Q ss_pred EecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 35 KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
.||+|+||.||+|.+..+++.||+|.+...... ......|..+++.+.. ..|++++++.+.+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~-- 67 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-----------GDCPFIVCMSYAFH-- 67 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh-----------CCCCcEeeeeeeee--
Confidence 489999999999999999999999988653211 1123444444444422 26889999888887
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhh
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~ 189 (393)
.....++||||+ +++|...+... ..+++..++.++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 68 --~~~~~~~v~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~nili~~~~-------- 134 (278)
T cd05606 68 --TPDKLSFILDLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHG-------- 134 (278)
T ss_pred --cCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCCCCHHHEEECCCC--------
Confidence 567899999999 77777766543 3589999999999999999999998 999999999999998766
Q ss_pred hhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcC-CCCchhhH
Q psy12288 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA-GYGPAADI 267 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~-~~~~~~Di 267 (393)
.++|+|||++...... .....++..|+|||.+.+. .++.++|+
T Consensus 135 -----------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 179 (278)
T cd05606 135 -----------------------------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 179 (278)
T ss_pred -----------------------------------CEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccch
Confidence 4999999998755322 2234689999999999754 57899999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
||+|+++|+|++|+.||........ ....... ...
T Consensus 180 ~s~G~~l~~l~~g~~p~~~~~~~~~----~~~~~~~-----------------------------------------~~~ 214 (278)
T cd05606 180 FSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMT-----------------------------------------LTM 214 (278)
T ss_pred HhHHHHHHHHHhCCCCCCCCCccch----HHHHHHh-----------------------------------------hcc
Confidence 9999999999999999975432110 0000000 001
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPRR 390 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~~ 390 (393)
...++...+..+.+++.+||..||.+|| ++.++++||||+...
T Consensus 215 ~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 215 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 1123344567889999999999999999 999999999998763
No 240
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6.1e-37 Score=281.05 Aligned_cols=248 Identities=26% Similarity=0.419 Sum_probs=200.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|++|.||+|....+++.|++|++..+. .....+.+|..+++.+. .|+|++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~-------------~~~~i~~~ 67 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN-------------GHPGIIKL 67 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc-------------cCCCchhH
Confidence 47999999999999999999999999999999987532 22345677888888871 38999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+...+++||++ +++|.+.+... ..++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 68 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~-~~~H~dl~~~ni~i~~~~- 139 (280)
T cd05581 68 YYTFQ----DEENLYFVLEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSK-GIIHRDLKPENILLDKDM- 139 (280)
T ss_pred HHHhc----CCceEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCC-
Confidence 99886 667899999999 88998888765 3589999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--------------------- 241 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--------------------- 241 (393)
.++++|||++.......
T Consensus 140 ------------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (280)
T cd05581 140 ------------------------------------------HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR 177 (280)
T ss_pred ------------------------------------------CEEecCCccccccCCccccccCCCCCcccccccccccc
Confidence 49999999887553221
Q ss_pred --CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc
Q psy12288 242 --ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 242 --~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
....++..|++||......++.++|+||||++++++++|..||...+ ....+..+..
T Consensus 178 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~--------------- 236 (280)
T cd05581 178 RFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN------EYLTFQKILK--------------- 236 (280)
T ss_pred ccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHh---------------
Confidence 12346788999999988888999999999999999999999997544 1111111111
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWL 386 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~ 386 (393)
....++...+..+.++|.+||+.||.+||++ +++++||||
T Consensus 237 ---------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 237 ---------------------------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred ---------------------------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 1112233446778899999999999999999 999999998
No 241
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.7e-37 Score=286.15 Aligned_cols=256 Identities=23% Similarity=0.316 Sum_probs=201.6
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
....+|++.++||+|+||.||+|.+..+++.||+|.+..... ..+.+.+|+.+++.+ .|+|+
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l--------------~h~ni 77 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL--------------RHPNT 77 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC--------------CCCCE
Confidence 344679999999999999999999999999999998864321 224567899999998 89999
Q ss_pred eeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++.+.+. .+...++||||+.+++.+.+.... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.+
T Consensus 78 v~~~~~~~----~~~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~-~i~H~dl~p~nIl~~~~ 151 (307)
T cd06607 78 IEYKGCYL----REHTAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSH-ERIHRDIKAGNILLTEP 151 (307)
T ss_pred EEEEEEEE----eCCeEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEECCC
Confidence 99999887 566789999999888888775433 3589999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh---
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI--- 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~--- 257 (393)
+ .++|+|||++..... .....++..|+|||++.
T Consensus 152 ~-------------------------------------------~~kL~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~ 187 (307)
T cd06607 152 G-------------------------------------------TVKLADFGSASLVSP-ANSFVGTPYWMAPEVILAMD 187 (307)
T ss_pred C-------------------------------------------CEEEeecCcceecCC-CCCccCCccccCceeeeccC
Confidence 6 499999998865432 23446788999999875
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
...++.++||||||+++|+|++|+.||...+. ......+.. +..|.
T Consensus 188 ~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~------~~~~~~~~~--~~~~~-------------------------- 233 (307)
T cd06607 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQ--NDSPT-------------------------- 233 (307)
T ss_pred CCCCCcccchHHHHHHHHHHHcCCCCCCCccH------HHHHHHHhc--CCCCC--------------------------
Confidence 34578899999999999999999999964431 111111100 00000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
......+..+.++|.+||..||.+||++.+++.||||....
T Consensus 234 ------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 234 ------------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred ------------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 00122456788999999999999999999999999998654
No 242
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=9.8e-37 Score=278.34 Aligned_cols=248 Identities=27% Similarity=0.402 Sum_probs=192.1
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
....||+|+||.||+|.+..++..|++|.+.... ...+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~~-- 75 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYL--------------KHRNIVQYLGSDS-- 75 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhc--------------CCCCeeeeeeeec--
Confidence 3468999999999999999999999999876442 2345678899999988 8899999998876
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSDYKGI--HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l--~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.+...++++|++ +++|.+.+.... ..+ +...+..++.|++.||+|||++ |++|+||||+||+++.+..
T Consensus 76 --~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~h~dl~p~nil~~~~~~----- 146 (268)
T cd06624 76 --ENGFFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNVLVNTYSG----- 146 (268)
T ss_pred --cCCEEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCC-----
Confidence 567899999999 678888776532 234 7788889999999999999998 9999999999999975432
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC--CC
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG--YG 262 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~--~~ 262 (393)
.++|+|||.+...... .....++..|+|||.+.+.. ++
T Consensus 147 -------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 189 (268)
T cd06624 147 -------------------------------------VVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYG 189 (268)
T ss_pred -------------------------------------eEEEecchhheecccCCCccccCCCCccccChhhhccccccCC
Confidence 4999999988654321 22345788999999987653 78
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||+|+++|+|++|..||....... ...... .
T Consensus 190 ~~~Dv~slGvvl~~l~~g~~p~~~~~~~~-----~~~~~~-~-------------------------------------- 225 (268)
T cd06624 190 APADIWSLGCTIVEMATGKPPFIELGEPQ-----AAMFKV-G-------------------------------------- 225 (268)
T ss_pred chhhhHHHHHHHHHHHhCCCCCccccChh-----hhHhhh-h--------------------------------------
Confidence 89999999999999999999995432110 000000 0
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.......++...+..+.+++++||..+|.+|||+.|++.||||
T Consensus 226 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 226 -MFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -hhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 0000111234456778899999999999999999999999997
No 243
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.2e-36 Score=284.18 Aligned_cols=276 Identities=20% Similarity=0.276 Sum_probs=193.9
Q ss_pred CceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeE
Q psy12288 40 HFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTH 116 (393)
Q Consensus 40 ~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 116 (393)
++|.||.+++..+++.||+|.+... ......+.+|+.+++.+ .|+|++++++.+. ....
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l--------------~h~~i~~~~~~~~----~~~~ 73 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL--------------QHPNILPYVTSFI----VDSE 73 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc--------------CCcchhhhhheee----cCCe
Confidence 4456677767779999999998753 23345778999999998 7899999999887 5677
Q ss_pred EEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhccc
Q psy12288 117 ICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHH 195 (393)
Q Consensus 117 ~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~ 195 (393)
.+++|||+ ++++.+++.......+++..+..++.|++.||+|||++ +++|+||||+||+++.++
T Consensus 74 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~ivH~dlk~~Nili~~~~-------------- 138 (314)
T cd08216 74 LYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK-GFIHRSVKASHILLSGDG-------------- 138 (314)
T ss_pred EEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCcceEEEecCC--------------
Confidence 99999999 67787777665445588999999999999999999998 999999999999998766
Q ss_pred ccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhHHHhcC--CCCc
Q psy12288 196 KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVEVLIGA--GYGP 263 (393)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE~~~~~--~~~~ 263 (393)
.++++|||.+...... .....++..|+|||++... .++.
T Consensus 139 -----------------------------~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 189 (314)
T cd08216 139 -----------------------------KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNE 189 (314)
T ss_pred -----------------------------ceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCc
Confidence 4899999987644211 1223457789999999764 4789
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+||+||++|+|++|+.||...... . .......+..+......... ...+........... ...
T Consensus 190 ~~Diws~G~il~el~~g~~pf~~~~~~------~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~ 255 (314)
T cd08216 190 KSDIYSVGITACELANGHVPFKDMPAT------Q--MLLEKVRGTVPCLLDKSTYP-----LYEDSMSQSRSSNEH-PNN 255 (314)
T ss_pred chhHHHHHHHHHHHHhCCCCCCCCCHH------H--HHHHHHhccCccccccCchh-----hhcCCcCcccccccc-cch
Confidence 999999999999999999999754321 1 11112222222111000000 000000000000000 000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
............+..+.+|+++||..||++|||++|+++||||+.+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~ 303 (314)
T cd08216 256 RDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKR 303 (314)
T ss_pred hhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcc
Confidence 111111223456778999999999999999999999999999998864
No 244
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=8.2e-37 Score=277.59 Aligned_cols=246 Identities=20% Similarity=0.318 Sum_probs=195.4
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.++||+|+||.||+|... +++.||+|.+.........+.+|+.+++.+ .|+|++++.+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 68 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQL--------------QHPRLVRLYA 68 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhc--------------CCcCeeeEEE
Confidence 4578999999999999999999754 567899999886665567788999999998 7889999887
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ....+++||++ +++|.+.+.......++..++..++.|++.||++||+. |++|+||||+||+++.++
T Consensus 69 ~~~-----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~--- 139 (260)
T cd05067 69 VVT-----QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK-NYIHRDLRAANILVSETL--- 139 (260)
T ss_pred EEc-----cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHHhEEEcCCC---
Confidence 653 34589999999 78898887665555688999999999999999999997 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++....... ....++..|+|||.+.+..
T Consensus 140 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~ 179 (260)
T cd05067 140 ----------------------------------------CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 179 (260)
T ss_pred ----------------------------------------CEEEccCcceeecCCCCcccccCCcccccccCHHHhccCC
Confidence 49999999987554211 1223467899999999888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|++++ |+.||.+.+. ......+.. +.
T Consensus 180 ~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~--~~------------------------------- 220 (260)
T cd05067 180 FTIKSDVWSFGILLTEIVTYGRIPYPGMTN------PEVIQNLER--GY------------------------------- 220 (260)
T ss_pred cCcccchHHHHHHHHHHHhCCCCCCCCCCh------HHHHHHHHc--CC-------------------------------
Confidence 8999999999999999998 9999975441 111111111 00
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.+++.+||..+|++|||++++++
T Consensus 221 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 221 --------RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred --------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00112334567899999999999999999999875
No 245
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.2e-36 Score=275.68 Aligned_cols=248 Identities=29% Similarity=0.439 Sum_probs=197.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc------ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+|+..+.||+|++|.||+|....++..|++|.+.... .....+.+|+.+++.+ .|+++++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~ 66 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL--------------QHPNIVQ 66 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc--------------CCCCchh
Confidence 5788899999999999999999899999999876432 1235577899999988 8899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. .+...++++||+ +++|.+++... ..++...+..++.|++.|+++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~~~ni~~~~~~ 139 (258)
T cd06632 67 YLGTER----EEDNLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILVDTNG 139 (258)
T ss_pred eeeeEe----cCCeEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC
Confidence 988776 567899999999 67888877654 3478899999999999999999998 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||.+...... .....++..|++||.+...
T Consensus 140 -------------------------------------------~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~ 176 (258)
T cd06632 140 -------------------------------------------VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQ 176 (258)
T ss_pred -------------------------------------------CEEEccCccceeccccccccccCCCcceeCHHHhcCC
Confidence 4999999988754332 2344578899999999876
Q ss_pred C-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 ~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
. ++.++|+||||+++|+|++|..||..... ......+... +.
T Consensus 177 ~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~-~~------------------------------ 219 (258)
T cd06632 177 GGYGLAADIWSLGCTVLEMATGKPPWSQLEG------VAAVFKIGRS-KE------------------------------ 219 (258)
T ss_pred CCCCchhhhHHHHHHHHHHHhCCCCcccCcH------HHHHHHHHhc-cc------------------------------
Confidence 6 88999999999999999999999964331 1111111000 00
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...++...+..+.+++++||..+|.+||++.+++.|||+
T Consensus 220 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 220 ---------LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ---------CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 011223456778899999999999999999999999997
No 246
>KOG0596|consensus
Probab=100.00 E-value=1.2e-37 Score=289.69 Aligned_cols=253 Identities=25% Similarity=0.371 Sum_probs=195.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEe---cccccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+..|+++++||+||.+.||++.....+- +|+|.+. .+......+.+|+.+|..+. +|..|+.+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~i-yalkkv~~~~~D~qtl~gy~nEI~lL~KLk-------------g~~~IIqL 425 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQI-YALKKVVLLEADNQTLDGYRNEIALLNKLK-------------GHDKIIQL 425 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcc-hhhhHHHHhhcCHHHHHHHHHHHHHHHHhc-------------CCceEEEE
Confidence 6789999999999999999996654444 5555433 33445677899999999994 77888898
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++.=. .++++|||||+-..+|...+..... -.+.-.++.+..|++.|+.++|++ ||||.||||.|+|+-.
T Consensus 426 ~DYEv----~d~~lYmvmE~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~-gIVHSDLKPANFLlVk---- 495 (677)
T KOG0596|consen 426 YDYEV----TDGYLYMVMECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQH-GIVHSDLKPANFLLVK---- 495 (677)
T ss_pred eeeec----cCceEEEEeecccccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHh-ceeecCCCcccEEEEe----
Confidence 88665 6889999999999999888866542 244348899999999999999998 9999999999999842
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~ 258 (393)
+++||+|||.|.-.... ....+||+.||+||.+..
T Consensus 496 ----------------------------------------G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~ 535 (677)
T KOG0596|consen 496 ----------------------------------------GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTD 535 (677)
T ss_pred ----------------------------------------eeEEeeeechhcccCccccceeeccccCcccccCHHHHhh
Confidence 26999999998766433 335689999999999964
Q ss_pred C-----------CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 259 A-----------GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 259 ~-----------~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
. ..++++||||||||+|+|+-|+.||.. .....+.+..+..+--
T Consensus 536 ~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~--------~~n~~aKl~aI~~P~~----------------- 590 (677)
T KOG0596|consen 536 MSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ--------IINQIAKLHAITDPNH----------------- 590 (677)
T ss_pred ccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH--------HHHHHHHHHhhcCCCc-----------------
Confidence 3 257899999999999999999999952 2223333333322210
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.++|+.- ...+++++|+.||.+||.+||++.+||+|||+..
T Consensus 591 --------------------~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 591 --------------------EIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred --------------------cccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 0112211 1223889999999999999999999999999875
No 247
>KOG0577|consensus
Probab=100.00 E-value=5e-38 Score=293.71 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=206.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|.-++.||.|+||.||-|++..+.+.||||.+..+... =+.+..|+.+|+.+ .|||.+.+-
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l--------------~HPntieYk 92 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL--------------RHPNTIEYK 92 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc--------------cCCCccccc
Confidence 577788999999999999999999999999998754322 24567799999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
++|- .....|+|||||-|+-.+.+.-.. .++.+.++..|+.+.+.||+|||+. +.+|||||..|||+++++
T Consensus 93 gCyL----re~TaWLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~-~~IHRDiKAGNILLse~g--- 163 (948)
T KOG0577|consen 93 GCYL----REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NRIHRDIKAGNILLSEPG--- 163 (948)
T ss_pred ceee----ccchHHHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHh-hHHhhhccccceEecCCC---
Confidence 9987 566789999999777666665443 4588999999999999999999998 999999999999998887
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc---CCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG---AGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~ 261 (393)
.+||+|||.+... .+....+|||+|||||++.. +.|
T Consensus 164 ----------------------------------------~VKLaDFGSAsi~-~PAnsFvGTPywMAPEVILAMDEGqY 202 (948)
T KOG0577|consen 164 ----------------------------------------LVKLADFGSASIM-APANSFVGTPYWMAPEVILAMDEGQY 202 (948)
T ss_pred ----------------------------------------eeeeccccchhhc-CchhcccCCccccchhHheecccccc
Confidence 5999999987643 44567899999999999975 468
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+-++||||||++-.||...++|+...+ ...++..|.....+.-
T Consensus 203 dgkvDvWSLGITCIELAERkPPlFnMN------AMSALYHIAQNesPtL------------------------------- 245 (948)
T KOG0577|consen 203 DGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESPTL------------------------------- 245 (948)
T ss_pred CCccceeeccchhhhhhhcCCCccCch------HHHHHHHHHhcCCCCC-------------------------------
Confidence 999999999999999999999987555 3344444433322210
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
-+++-+..|..|+..||..-|.+|||.+++|.|+|+.-
T Consensus 246 ---------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 246 ---------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred ---------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 01345678999999999999999999999999999854
No 248
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.3e-36 Score=275.53 Aligned_cols=244 Identities=21% Similarity=0.319 Sum_probs=192.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||+|... .+..+|+|.+.........+.+|+.+++.+ .|+|++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~ 68 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKL--------------SHPKLVQLYGVC 68 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHC--------------CCCCceeEEEEE
Confidence 46899999999999999999775 455799998876555556788899999998 889999999887
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....+++|||+ +++|.+.+.... ..++...+..++.|++.||+|||++ |++|+||+|+||+++.++
T Consensus 69 ~----~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~----- 137 (256)
T cd05114 69 T----QQKPLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN-SFIHRDLAARNCLVSSTG----- 137 (256)
T ss_pred c----cCCCEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcceEEEcCCC-----
Confidence 6 566799999999 788888776533 3478899999999999999999998 999999999999997665
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++++|||.+...... .....++..|+|||.+.+..++
T Consensus 138 --------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 179 (256)
T cd05114 138 --------------------------------------VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYS 179 (256)
T ss_pred --------------------------------------eEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccc
Confidence 4999999988754321 1122345679999999888899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |+.||...+ ....+..+.. +..
T Consensus 180 ~~~Di~s~G~~l~el~~~g~~p~~~~~------~~~~~~~i~~--~~~-------------------------------- 219 (256)
T cd05114 180 SKSDVWSFGVLMWEVFTEGKMPFEKKS------NYEVVEMISR--GFR-------------------------------- 219 (256)
T ss_pred hhhhhHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHC--CCC--------------------------------
Confidence 99999999999999999 899996544 1122222211 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+++.+||..||.+||+++++++
T Consensus 220 -------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 220 -------LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0011223457889999999999999999999986
No 249
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=7.4e-37 Score=278.12 Aligned_cols=246 Identities=26% Similarity=0.350 Sum_probs=197.5
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||.|++|.||+|.+..+++.+++|.+.... ...+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~~--- 63 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC--------------NHPFIVKLYRTFK--- 63 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC--------------CCCCEeeeeeeEE---
Confidence 699999999999999999999999987533 2335678899999988 8999999999876
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.+...++++||+ +++|.+.+... ..++...+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~-~~~h~dl~~~nilv~~~~--------- 130 (262)
T cd05572 64 -DKKYIYMLMEYCLGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNR-GIIYRDLKPENLLLDSNG--------- 130 (262)
T ss_pred -cCCccEEEEecCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEEcCCC---------
Confidence 667799999998 78888888664 3388999999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||++...... .....++..|++||.+.+..++.++|+|
T Consensus 131 ----------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~ 176 (262)
T cd05572 131 ----------------------------------YVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYW 176 (262)
T ss_pred ----------------------------------CEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhh
Confidence 4999999998765432 2234678899999999888889999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhh
Q psy12288 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348 (393)
Q Consensus 269 SlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (393)
|+|+++|+|++|..||...... .......+.. +. ..
T Consensus 177 slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~--~~--------------------------------------~~ 212 (262)
T cd05572 177 SLGILLYELLTGRPPFGEDDED----PMEIYNDILK--GN--------------------------------------GK 212 (262)
T ss_pred hhHHHHHHHHhCCCCcCCCCCC----HHHHHHHHhc--cC--------------------------------------CC
Confidence 9999999999999999754421 1111111110 00 11
Q ss_pred ccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 349 YHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 349 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
..++...+..+.++|.+||..||.+||+ ++|+++||||++.
T Consensus 213 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 213 LEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred CCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 1123334678899999999999999999 9999999999874
No 250
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.1e-37 Score=292.12 Aligned_cols=250 Identities=19% Similarity=0.275 Sum_probs=191.2
Q ss_pred CCeEEEEEEecccCceEEEEEEe-----CCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWD-----LQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.++||+|+||.||+|.+ ..++..||+|+++... ...+.+.+|+.+++.++ .|+|
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~-------------~Hpn 100 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-------------NHIN 100 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc-------------CCcc
Confidence 35899999999999999999964 3456789999987432 22355778999999883 6899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
|+++++.+. .+...++||||+ +|+|.+++....
T Consensus 101 Iv~l~~~~~----~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (375)
T cd05104 101 IVNLLGACT----VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVS 176 (375)
T ss_pred eeeeeeeec----cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcc
Confidence 999999886 566789999999 888888875421
Q ss_pred -------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 137 -------------------------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 137 -------------------------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
...++.+.+..++.|++.||+|||++ |++||||||+||+++.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nill~~~~---- 251 (375)
T cd05104 177 YVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-NCIHRDLAARNILLTHGR---- 251 (375)
T ss_pred cccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCchhhEEEECCC----
Confidence 11367788899999999999999998 999999999999998665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchhHHHhcCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++....... ....++..|+|||++.+..
T Consensus 252 ---------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 292 (375)
T cd05104 252 ---------------------------------------ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCV 292 (375)
T ss_pred ---------------------------------------cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCC
Confidence 48999999987553221 1123456799999999988
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|||||||++|+|++ |..||...... ......... +.
T Consensus 293 ~~~~sDi~slG~~l~ellt~g~~p~~~~~~~------~~~~~~~~~-~~------------------------------- 334 (375)
T cd05104 293 YTFESDVWSYGILLWEIFSLGSSPYPGMPVD------SKFYKMIKE-GY------------------------------- 334 (375)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCCCCCch------HHHHHHHHh-Cc-------------------------------
Confidence 9999999999999999998 88999654311 111111100 00
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+||.+||..||++|||+.|+++.
T Consensus 335 --------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 335 --------RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred --------cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 000112234678899999999999999999999864
No 251
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.9e-36 Score=276.19 Aligned_cols=250 Identities=24% Similarity=0.332 Sum_probs=195.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||+|.+..+++.||||.+.... .....+.+|+.+++.+ .|++++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 67 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL--------------NHPNVIKY 67 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC--------------CCcceeee
Confidence 47999999999999999999999999999999875321 2234567899999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+. ..+..++++||+ +++|.+.+... ....+++..+..++.|++.||+|||++ +++|+||+|+||+++.+
T Consensus 68 ~~~~~----~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~nil~~~~ 142 (267)
T cd08228 68 LDSFI----EDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFITAT 142 (267)
T ss_pred eeeEE----ECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCCHHHEEEcCC
Confidence 99887 456789999999 56777766432 223478889999999999999999998 99999999999999776
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~ 257 (393)
+ .++|+|||.+...... .....+++.|+|||.+.
T Consensus 143 ~-------------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 179 (267)
T cd08228 143 G-------------------------------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179 (267)
T ss_pred C-------------------------------------------CEEECccccceeccchhHHHhcCCCCccccChhhhc
Confidence 6 4999999988765432 12345788999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++|+||+|+++|+|++|..||...... ...+.......+..|.
T Consensus 180 ~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~-------------------------- 228 (267)
T cd08228 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----LFSLCQKIEQCDYPPL-------------------------- 228 (267)
T ss_pred cCCCCchhhHHHHHHHHHHHhcCCCCCcccccc-----HHHHHHHHhcCCCCCC--------------------------
Confidence 888899999999999999999999999643311 1111111111111100
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+..+.++|.+||..+|.+||++.++++.
T Consensus 229 -------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 229 -------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred -------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 012345678899999999999999999999874
No 252
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2e-36 Score=273.84 Aligned_cols=249 Identities=25% Similarity=0.429 Sum_probs=200.8
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||.|++|.||++.+..++..|++|.+.... .....+.+|+++++.+ .|+|++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~~~~~~~ 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL--------------NHPNIIKYYE 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc--------------CCCChhheEE
Confidence 5899999999999999999999999999999987542 2345678899999998 7899999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+. .+...++++|++ +++|.+.+.... ...++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~~~H~dl~~~nil~~~~~- 140 (258)
T cd08215 67 SFE----EKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFLTSNG- 140 (258)
T ss_pred EEe----cCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHHeEEcCCC-
Confidence 876 557899999999 568888776542 35589999999999999999999998 999999999999998665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||.+...... .....+++.|+|||.+.+.
T Consensus 141 ------------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~ 178 (258)
T cd08215 141 ------------------------------------------LVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNK 178 (258)
T ss_pred ------------------------------------------cEEECCccceeecccCcceecceeeeecccChhHhccC
Confidence 4999999988765432 1234578889999999888
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+||+|+++++|++|+.||...+. ......... +.
T Consensus 179 ~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~--~~------------------------------- 219 (258)
T cd08215 179 PYNYKSDIWSLGCVLYELCTLKHPFEGENL------LELALKILK--GQ------------------------------- 219 (258)
T ss_pred CCCccccHHHHHHHHHHHHcCCCCCCCCcH------HHHHHHHhc--CC-------------------------------
Confidence 889999999999999999999999964331 111111100 00
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....+...+..+.+++++||..+|.+|||+.++++||||
T Consensus 220 --------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 220 --------YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 001123455678899999999999999999999999997
No 253
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.4e-36 Score=276.35 Aligned_cols=255 Identities=30% Similarity=0.427 Sum_probs=205.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||+|++|.||+|.+..+++.|++|.+.... .....+.+|+..+..+ .|++++++.+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC--------------ESPYVVKCYG 66 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc--------------CCCCeeeEEE
Confidence 36899999999999999999999999999999887543 2356678899999988 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCeeeccCCCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+. .....+++|||+ +++|.+.+... ..++...+..++.|++.|+++||+ . +++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~~~-- 137 (264)
T cd06623 67 AFY----KEGEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINSKG-- 137 (264)
T ss_pred EEc----cCCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECCCC--
Confidence 887 567899999999 58888887654 458999999999999999999999 8 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC---CCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA---DEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||.+........ ...++..|+|||.+.+..
T Consensus 138 -----------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~ 176 (264)
T cd06623 138 -----------------------------------------EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGES 176 (264)
T ss_pred -----------------------------------------CEEEccCccceecccCCCcccceeecccccCHhhhCCCC
Confidence 499999998876543222 335688999999999888
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|..||....... .......+ .....
T Consensus 177 ~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~---~~~~~------------------------------ 220 (264)
T cd06623 177 YSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELMQAI---CDGPP------------------------------ 220 (264)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHHHHH---hcCCC------------------------------
Confidence 8999999999999999999999997654210 11111111 11000
Q ss_pred hHHHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..++.. .+..+.++|.+||..+|.+||++.|+++||||+...
T Consensus 221 --------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 221 --------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred --------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 011122 567889999999999999999999999999997653
No 254
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.9e-36 Score=275.67 Aligned_cols=245 Identities=20% Similarity=0.277 Sum_probs=191.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+|++.++||+|+||.||+|.+..++ .||+|.+.........+.+|+.+++.+ .|++++++++.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l--------------~~~~i~~~~~~ 69 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKL--------------RHEKLVQLYAV 69 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhC--------------CCCCcceEEEE
Confidence 357999999999999999999876554 599999886554456788999999998 78888888776
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. ....+++|||+ ++++.+++.......++.+.+..++.|++.||++||+. +++|+||||+||+++.++
T Consensus 70 ~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~Nill~~~~---- 139 (262)
T cd05071 70 VS-----EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENL---- 139 (262)
T ss_pred EC-----CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcccEEEcCCC----
Confidence 53 34578999999 67888888764434578899999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----CCCCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----DEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||.+........ ...++..|+|||...+..+
T Consensus 140 ---------------------------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 180 (262)
T cd05071 140 ---------------------------------------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 180 (262)
T ss_pred ---------------------------------------cEEeccCCceeeccccccccccCCcccceecCHhHhccCCC
Confidence 489999999875543221 2234667999999988889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|+||||+++|+|++ |..||..... ......+.. ..
T Consensus 181 ~~~~DvwslG~~l~ellt~g~~p~~~~~~------~~~~~~~~~---~~------------------------------- 220 (262)
T cd05071 181 TIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVER---GY------------------------------- 220 (262)
T ss_pred CchhhHHHHHHHHHHHHcCCCCCCCCCCh------HHHHHHHhc---CC-------------------------------
Confidence 999999999999999999 8888865431 111111110 00
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.+++.+||..||++||++.++++
T Consensus 221 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 221 -------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 00112345567889999999999999999999875
No 255
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.1e-37 Score=280.54 Aligned_cols=253 Identities=24% Similarity=0.409 Sum_probs=199.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.|++.++||+|+||.||+|.+..+++.||+|.+..+ ......+.+|+.+++.+.+ ..|++++++.+.
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~-----------~~~~~vi~~~~~ 70 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ-----------SQPPNITKYYGS 70 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc-----------CCCCCeeeEeee
Confidence 588899999999999999999999999999988643 2234567889999999843 158999999988
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+...+++|||+ +++|.+++... .+++..+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 71 ~~----~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~p~ni~i~~~~---- 138 (277)
T cd06917 71 YL----KGPRLWIIMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV-GVIHRDIKAANILVTNTG---- 138 (277)
T ss_pred ee----eCCEEEEEEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHHEEEcCCC----
Confidence 76 567899999999 67887776543 488999999999999999999998 999999999999998765
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+. .+
T Consensus 139 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 179 (277)
T cd06917 139 ---------------------------------------NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYY 179 (277)
T ss_pred ---------------------------------------CEEEccCCceeecCCCccccccccCCcceeCHHHhccCCcc
Confidence 4999999988765432 2334678899999998754 46
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||....... .+.......+.
T Consensus 180 ~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~---------~~~~~~~~~~~------------------------------ 220 (277)
T cd06917 180 DTKADIWSLGITIYEMATGNPPYSDVDAFR---------AMMLIPKSKPP------------------------------ 220 (277)
T ss_pred ccchhHHHHHHHHHHHHhCCCCCCCCChhh---------hhhccccCCCC------------------------------
Confidence 889999999999999999999996443111 00000000000
Q ss_pred HHHHhhhccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.++ ...+..+.+++.+||..||.+||++.+++.||||+...
T Consensus 221 --------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 221 --------RLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred --------CCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 001 12456788999999999999999999999999998754
No 256
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.9e-36 Score=279.43 Aligned_cols=255 Identities=20% Similarity=0.326 Sum_probs=195.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.++||+|+||.||+|.... .+..||+|.+..... ....+.+|+.+++.+ .|++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~ 70 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF--------------TCHH 70 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC--------------CCCC
Confidence 4689999999999999999997553 245799998764332 223467788889888 7899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
++++++.+. .+...++||||+ +++|.+.+.... ...++...+..++.|++.||+|||++ +++||||
T Consensus 71 i~~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~di 145 (288)
T cd05061 71 VVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDL 145 (288)
T ss_pred eeeEEEEEc----CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCC
Confidence 999998876 556789999999 789988886432 12245667889999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEI 245 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~ 245 (393)
||+||+++.++ .++|+|||+++..... .....
T Consensus 146 kp~nili~~~~-------------------------------------------~~~L~Dfg~~~~~~~~~~~~~~~~~~ 182 (288)
T cd05061 146 AARNCMVAHDF-------------------------------------------TVKIGDFGMTRDIYETDYYRKGGKGL 182 (288)
T ss_pred ChheEEEcCCC-------------------------------------------cEEECcCCccccccccccccccCCCc
Confidence 99999998765 4999999988754321 11223
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+... .+....+. .+..
T Consensus 183 ~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~------~~~~~~~~--~~~~--------------- 239 (288)
T cd05061 183 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN------EQVLKFVM--DGGY--------------- 239 (288)
T ss_pred ccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHH--cCCC---------------
Confidence 4677999999998889999999999999999998 7889865431 11111110 0100
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc------CCCCCCCC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR------HPWLNPRR 390 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~~~~~~ 390 (393)
...+...+..+.+++.+||+.||.+|||+.++++ ||||+++.
T Consensus 240 ------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 287 (288)
T cd05061 240 ------------------------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 287 (288)
T ss_pred ------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence 0112234567889999999999999999999987 99999864
No 257
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.5e-36 Score=275.87 Aligned_cols=249 Identities=24% Similarity=0.374 Sum_probs=189.1
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccc----hhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA----DTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|++....... .....|..++... ..|+|++++++.+.
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~-------------~~~~~i~~~~~~~~- 67 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQ-------------GESPYVAKLYYSFQ- 67 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhc-------------CCCCCeeeeeeeEE-
Confidence 57899999999999999999999999986532211 1223333333222 17899999999887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+..+++|+||+ +++|..++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++
T Consensus 68 ---~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~-~i~H~dl~p~nil~~~~~------- 134 (260)
T cd05611 68 ---SKDYLYLVMEYLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLLIDQTG------- 134 (260)
T ss_pred ---cCCeEEEEEeccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCC-------
Confidence 667899999999 77888877654 3488999999999999999999998 999999999999997665
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||++..... .....++..|++||.+.+..++.++|+|
T Consensus 135 ------------------------------------~~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~ 177 (260)
T cd05611 135 ------------------------------------HLKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWW 177 (260)
T ss_pred ------------------------------------cEEEeecccceeccc-cccCCCCcCccChhhhcCCCCcchhhhH
Confidence 499999998765432 2334578899999999988889999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhh
Q psy12288 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348 (393)
Q Consensus 269 SlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (393)
|||+++|+|++|..||...+. ......+.......+.
T Consensus 178 slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~------------------------------------- 214 (260)
T cd05611 178 SLGCVIFEFLFGYPPFHAETP------DAVFDNILSRRINWPE------------------------------------- 214 (260)
T ss_pred HHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcccCCCC-------------------------------------
Confidence 999999999999999965431 1111111100000000
Q ss_pred ccCChhhHHHHHHHHHhccccCCCCCcCH---HHHhcCCCCCCCC
Q psy12288 349 YHWSKAEASDFADFLLPMLHVNQKLRASA---ADCLRHPWLNPRR 390 (393)
Q Consensus 349 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~ell~hp~~~~~~ 390 (393)
......+..+.++|.+||..||.+||++ +|++.||||++.+
T Consensus 215 -~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 215 -EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258 (260)
T ss_pred -cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence 0112345778899999999999999954 7999999998764
No 258
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.3e-36 Score=278.91 Aligned_cols=250 Identities=26% Similarity=0.398 Sum_probs=198.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
-|++.+.||.|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++++.
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~ 70 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC--------------DSPYVTKYYGS 70 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc--------------CCCCEeEEEEE
Confidence 4788999999999999999999899999999876432 2235677888888888 88999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+...++||||+ ++++...+.. ..++...+..++.|++.|+.+||+. |++|+||+|+||+++.++
T Consensus 71 ~~----~~~~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~Ni~i~~~~---- 138 (277)
T cd06641 71 YL----KDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHG---- 138 (277)
T ss_pred EE----eCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC-CeecCCCCHHhEEECCCC----
Confidence 87 567899999999 6677777654 2488999999999999999999998 999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++++|||++...... .....++..|+|||.+.+..++
T Consensus 139 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 179 (277)
T cd06641 139 ---------------------------------------EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 179 (277)
T ss_pred ---------------------------------------CEEEeecccceecccchhhhccccCCccccChhhhccCCCC
Confidence 4999999988654332 1223578889999999888889
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||+||++|+|++|..||..... ......+.. +..
T Consensus 180 ~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~--~~~--------------------------------- 218 (277)
T cd06641 180 SKADIWSLGITAIELAKGEPPHSELHP------MKVLFLIPK--NNP--------------------------------- 218 (277)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCccch------HHHHHHHhc--CCC---------------------------------
Confidence 999999999999999999999964331 111111000 000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+....+..+.+++.+||..+|.+||++.++++||||+...
T Consensus 219 ------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 219 ------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred ------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 001234456788999999999999999999999999998643
No 259
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=8.1e-37 Score=281.06 Aligned_cols=247 Identities=19% Similarity=0.283 Sum_probs=194.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCC-----ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDK-----TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.+|++.+.||+|+||.||+|.....+ ..|++|.+.... .....+.+|+.+++.+ .|+++
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l--------------~h~~i 70 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL--------------QHPNI 70 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc--------------CCccc
Confidence 36999999999999999999876655 679999886432 2235578899999988 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY--------------KGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
+++++.+. .....+++|||+ +++|.+++..... ..++..++..++.|++.||+|||++ |+
T Consensus 71 ~~~~~~~~----~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-~i 145 (283)
T cd05048 71 VCLLGVCT----KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-HF 145 (283)
T ss_pred ceEEEEEc----CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-Ce
Confidence 99988876 556789999999 7888888865321 3477888999999999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----- 240 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----- 240 (393)
+|+||||+||+++.++ .++|+|||++......
T Consensus 146 ~H~dlkp~Nil~~~~~-------------------------------------------~~~L~dfg~~~~~~~~~~~~~ 182 (283)
T cd05048 146 VHRDLAARNCLVGEGL-------------------------------------------TVKISDFGLSRDIYSADYYRV 182 (283)
T ss_pred eccccccceEEEcCCC-------------------------------------------cEEECCCcceeeccccccccc
Confidence 9999999999998766 4999999998754321
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
.....+++.|+|||.+.+..++.++|+|||||++|+|++ |..||.+.+. .+....+.. +..
T Consensus 183 ~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~------~~~~~~i~~--~~~---------- 244 (283)
T cd05048 183 QSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN------QEVIEMIRS--RQL---------- 244 (283)
T ss_pred cCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHc--CCc----------
Confidence 123345788999999998889999999999999999998 9999975442 111111110 100
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+|+.+||+.||.+||++.|++++
T Consensus 245 -----------------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 245 -----------------------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred -----------------------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 01224566789999999999999999999999876
No 260
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-36 Score=278.65 Aligned_cols=250 Identities=18% Similarity=0.256 Sum_probs=193.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|++.+.||+|++|.||+|.+.. ++..|++|.+..... ....+.+|+.+++.+ .|+|+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i 71 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF--------------NHQNI 71 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC--------------CCCCE
Confidence 579999999999999999999987 677899998764321 234577889999988 88999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-----KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-----~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
+++++.+. .....+++|||+ +++|.+++..... ..+++..+..++.|++.||+|||++ +++|+||||+|
T Consensus 72 ~~~~~~~~----~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~n 146 (277)
T cd05036 72 VRLIGVSF----ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARN 146 (277)
T ss_pred eeEEEEEc----cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhe
Confidence 99998776 455678999999 7888888765431 2478899999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCC
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQ 249 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~ 249 (393)
|+++.++. ...++|+|||+++...... .....+..
T Consensus 147 il~~~~~~----------------------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 186 (277)
T cd05036 147 CLLTCKGP----------------------------------------GRVAKIADFGMARDIYRASYYRKGGRAMLPIK 186 (277)
T ss_pred EEEeccCC----------------------------------------CcceEeccCccccccCCccceecCCCCCccHh
Confidence 99976542 1148999999987653211 12233567
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|+|||++.+..++.++|||||||++|+|++ |..||...+.. .....+ . +.
T Consensus 187 y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~------~~~~~~-~--~~-------------------- 237 (277)
T cd05036 187 WMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ------EVMEFV-T--GG-------------------- 237 (277)
T ss_pred hCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHH-H--cC--------------------
Confidence 999999998889999999999999999997 99999754421 111111 0 00
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+...+..+.+++.+||..+|.+||++.++++|
T Consensus 238 ------------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 238 ------------------GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred ------------------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0011223445678899999999999999999999987
No 261
>KOG0603|consensus
Probab=100.00 E-value=2.1e-37 Score=293.74 Aligned_cols=246 Identities=27% Similarity=0.414 Sum_probs=204.8
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.+.+.|.+...+|.|+|+.|-.+.+..+++..++|++... .....+|+.++.... .|+|++++.
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~-------------~h~niv~~~ 382 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVR-------------DHPNIVKSH 382 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhc-------------CCCcceeec
Confidence 3457899999999999999999999999999999998765 345567776666663 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe-echh
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC-VDYD 182 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~-~~~~ 182 (393)
+.+. .+.+.++|||.+ ++-+++.+..... +. .++..++++|+.|+.|||++ |++||||||+|||++ .++
T Consensus 383 ~v~~----~~~~~~~v~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~-gvvhRDLkp~NIL~~~~~g- 453 (612)
T KOG0603|consen 383 DVYE----DGKEIYLVMELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQ-GVVHRDLKPGNILLDGSAG- 453 (612)
T ss_pred ceec----CCceeeeeehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhc-CeeecCCChhheeecCCCC-
Confidence 9887 788999999999 6666666655432 33 77788999999999999998 999999999999995 444
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
+++|+|||.++.........+-|..|.|||++...+|+
T Consensus 454 ------------------------------------------~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt 491 (612)
T KOG0603|consen 454 ------------------------------------------HLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYT 491 (612)
T ss_pred ------------------------------------------cEEEEEechhhhCchhhcccchhhcccChhhhccCCCC
Confidence 59999999998777666666779999999999999999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|+.||...... ..+...++.
T Consensus 492 ~acD~WSLGvlLy~ML~G~tp~~~~P~~---------~ei~~~i~~---------------------------------- 528 (612)
T KOG0603|consen 492 EACDWWSLGVLLYEMLTGRTLFAAHPAG---------IEIHTRIQM---------------------------------- 528 (612)
T ss_pred cchhhHHHHHHHHHHHhCCCccccCCch---------HHHHHhhcC----------------------------------
Confidence 9999999999999999999999765522 122222221
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..++..+|..+.+|+++||++||.+||++.+++.||||
T Consensus 529 ------~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 529 ------PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ------CccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 12335678899999999999999999999999999999
No 262
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8.3e-37 Score=280.49 Aligned_cols=246 Identities=22% Similarity=0.328 Sum_probs=193.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|.+.+.||+|+||.||+|.+.. ++..||+|.++..... .+.+.+|+.+++.+ .|+|+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i 70 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF--------------QHENI 70 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc--------------CCCCc
Confidence 468999999999999999998753 3578999998754322 46778999999998 78899
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
+++++.+. .+...+++|||+ +++|.+++.... ...+++..+..++.|++.|+++||++ |++|
T Consensus 71 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~h 145 (280)
T cd05049 71 VKFYGVCT----EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ-HFVH 145 (280)
T ss_pred hheeeEEe----cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-Ceec
Confidence 99998887 557799999999 788888875432 23477888999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FA 242 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~ 242 (393)
+||||+||+++.++ .++|+|||++...... ..
T Consensus 146 ~dlkp~nili~~~~-------------------------------------------~~kl~d~g~~~~~~~~~~~~~~~ 182 (280)
T cd05049 146 RDLATRNCLVGYDL-------------------------------------------VVKIGDFGMSRDVYTTDYYRVGG 182 (280)
T ss_pred cccccceEEEcCCC-------------------------------------------eEEECCcccceecccCcceecCC
Confidence 99999999998776 5999999998754221 12
Q ss_pred CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
...+++.|+|||++.+..++.++||||||+++|+|++ |..||...+. ......+. .+..
T Consensus 183 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~------~~~~~~~~--~~~~------------ 242 (280)
T cd05049 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN------EEVIECIT--QGRL------------ 242 (280)
T ss_pred CCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHH--cCCc------------
Confidence 2344678999999999889999999999999999998 9999965442 11111111 0100
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+++++||..||.+|||+.|+++
T Consensus 243 ---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 243 ---------------------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred ---------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0012345577889999999999999999999986
No 263
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.3e-36 Score=274.74 Aligned_cols=246 Identities=21% Similarity=0.290 Sum_probs=195.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.+.||+|++|.||+|.+. +++.||+|.++......+.+.+|+.+++.+ .|+|++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~ 69 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKL--------------RHPKLIQLYAV 69 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHC--------------CCCCccceeEE
Confidence 357999999999999999999865 456799999886555556788999999998 78999998887
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....+++||++ +++|.+.+.......++...+..++.|++.|+.+||+. |++|+||||+||+++.++
T Consensus 70 ~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~---- 140 (261)
T cd05068 70 CT----LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGENN---- 140 (261)
T ss_pred Ee----cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCcceEEEcCCC----
Confidence 76 556789999999 88999888765444588999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-CC---CCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-DE---IQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-~~---~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++........ .. ..+..|+|||.+.+..+
T Consensus 141 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 181 (261)
T cd05068 141 ---------------------------------------ICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRF 181 (261)
T ss_pred ---------------------------------------CEEECCcceEEEccCCcccccCCCcCceeccCccccccCCC
Confidence 499999999876543211 11 22357999999988889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|+||||+++|+|++ |+.||.+.. .......+... ..
T Consensus 182 ~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~-~~-------------------------------- 222 (261)
T cd05068 182 SIKSDVWSFGILLTEIVTYGRMPYPGMT------NAEVLQQVDQG-YR-------------------------------- 222 (261)
T ss_pred CchhhHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHcC-CC--------------------------------
Confidence 999999999999999999 999997543 11111111110 00
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+++.+||+.+|.+||+++++++
T Consensus 223 --------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 223 --------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred --------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 0112334567889999999999999999999875
No 264
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.3e-36 Score=274.12 Aligned_cols=245 Identities=20% Similarity=0.308 Sum_probs=191.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.+|++.+.||+|+||.||.|.... +..+|+|.+.......+.+.+|+.+++.+ .|+|++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~ 68 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKL--------------SHEKLVQLYGVC 68 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcC--------------CCCCeeeEEEEE
Confidence 469999999999999999997654 44599998876554456788999999988 899999999887
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....+++|||+ +++|.+.+.... ..+++..+..++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 69 ~----~~~~~~lv~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~nili~~~~----- 137 (256)
T cd05113 69 T----KQRPIYIVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQG----- 137 (256)
T ss_pred c----cCCCcEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCC-----
Confidence 6 455689999999 678888776533 3588999999999999999999998 999999999999997665
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+....... ....++..|++||.+.+..++
T Consensus 138 --------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~ 179 (256)
T cd05113 138 --------------------------------------CVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFS 179 (256)
T ss_pred --------------------------------------CEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCccc
Confidence 49999999876543221 112345679999999988899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |..||...+. ......+.. +..
T Consensus 180 ~~~Di~slG~~l~~l~~~g~~p~~~~~~------~~~~~~~~~--~~~-------------------------------- 219 (256)
T cd05113 180 SKSDVWAFGVLMWEVYSLGKMPYERFNN------SETVEKVSQ--GLR-------------------------------- 219 (256)
T ss_pred chhHHHHHHHHHHHHhcCCCCCcCcCCH------HHHHHHHhc--CCC--------------------------------
Confidence 99999999999999998 9999964431 111111111 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..||.+|||+.+++.+
T Consensus 220 -------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 220 -------LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 00112345688899999999999999999999875
No 265
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=8.5e-37 Score=287.91 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=190.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|.... +++.||+|++..... ..+.+.+|+.+++.+. .|+|
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~-------------~h~n 72 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG-------------HHLN 72 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc-------------cCcc
Confidence 4589999999999999999997543 357899998874322 2245667888888873 5889
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
++++++.+.. .+..++++|||+ +++|.+.+....
T Consensus 73 iv~~~~~~~~---~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
T cd05054 73 VVNLLGACTK---PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIE 149 (337)
T ss_pred hhheeeeEec---CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCcccccccccccc
Confidence 9999887752 345688999999 778877775421
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCC
Q psy12288 137 -----------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199 (393)
Q Consensus 137 -----------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
...++.+.+..++.|++.||+|||++ ||+||||||+||+++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivHrDikp~Nill~~~~------------------ 210 (337)
T cd05054 150 DKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASR-KCIHRDLAARNILLSENN------------------ 210 (337)
T ss_pred CcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEeCCC------------------
Confidence 12478888999999999999999998 999999999999998766
Q ss_pred cCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHH
Q psy12288 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMA 274 (393)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l 274 (393)
.++|+|||++...... .....++..|+|||++.+..++.++|||||||++
T Consensus 211 -------------------------~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l 265 (337)
T cd05054 211 -------------------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLL 265 (337)
T ss_pred -------------------------cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHH
Confidence 4999999998765321 1123446789999999999999999999999999
Q ss_pred HHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCCh
Q psy12288 275 FELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSK 353 (393)
Q Consensus 275 ~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (393)
|+|++ |..||.+.... +.+...... +.. ...+.
T Consensus 266 ~el~t~g~~p~~~~~~~------~~~~~~~~~-~~~---------------------------------------~~~~~ 299 (337)
T cd05054 266 WEIFSLGASPYPGVQID------EEFCRRLKE-GTR---------------------------------------MRAPE 299 (337)
T ss_pred HHHHHcCCCCCCCCCcc------HHHHHHHhc-cCC---------------------------------------CCCCc
Confidence 99998 99999653311 111111110 000 00112
Q ss_pred hhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 354 AEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 354 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+..+.+++.+||+.+|++||++.|+++|
T Consensus 300 ~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 300 YATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 345678899999999999999999999986
No 266
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.2e-36 Score=274.75 Aligned_cols=246 Identities=22% Similarity=0.334 Sum_probs=193.8
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.++||+|+||.||+|... ++..+|+|.+.......+.+.+|+.+++.+ .|++++++++
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l--------------~~~~i~~~~~ 68 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKL--------------RHDKLVQLYA 68 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhc--------------CCCceEEEEe
Confidence 3568999999999999999999765 556799999886555567788999999999 7888988887
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ....+++|||+ +++|.+.+.......+++..++.++.|++.||+|||++ +++|+||+|+||+++.++
T Consensus 69 ~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~Nili~~~~--- 139 (260)
T cd05070 69 VVS-----EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDLRSANILVGDGL--- 139 (260)
T ss_pred EEC-----CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEEeCCc---
Confidence 653 23478999999 67888888665445588999999999999999999998 999999999999998765
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||.+....... ....++..|+|||.+.+..
T Consensus 140 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 179 (260)
T cd05070 140 ----------------------------------------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 179 (260)
T ss_pred ----------------------------------------eEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCC
Confidence 48999999987653321 1223456799999998888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|+|++ |..||.+.+ ..+....+.. +.
T Consensus 180 ~~~~~Di~slG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~--~~------------------------------- 220 (260)
T cd05070 180 FTIKSDVWSFGILLTELVTKGRVPYPGMN------NREVLEQVER--GY------------------------------- 220 (260)
T ss_pred CcchhhhHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc--CC-------------------------------
Confidence 9999999999999999999 899996543 1122221111 00
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.+++.+||..||.+|||+.++++
T Consensus 221 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 221 --------RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred --------CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 00122345677899999999999999999999874
No 267
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.4e-36 Score=271.60 Aligned_cols=251 Identities=29% Similarity=0.435 Sum_probs=202.9
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.|++|++.... ...+.+.+|+.+++.+ .|++++++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL--------------QHPNIVRYYG 66 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc--------------CCCCEeeEEE
Confidence 4888999999999999999999999999999987554 2356778899999998 7899999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+... .....++++|++ +++|.+.+.... .+++..+..++.|++.||++||+. +++|+||+|+||+++.++
T Consensus 67 ~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~-~~~h~dl~p~ni~i~~~~--- 138 (260)
T cd06606 67 SERDE--EKNTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN-GIVHRDIKGANILVDSDG--- 138 (260)
T ss_pred EEecC--CCCeEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCC---
Confidence 88721 126799999999 788888876653 589999999999999999999998 999999999999998765
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||.+...... .....++..|++||.+.+.
T Consensus 139 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~ 178 (260)
T cd06606 139 ----------------------------------------VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGE 178 (260)
T ss_pred ----------------------------------------CEEEcccccEEecccccccccccCCCCCccccCHhhhcCC
Confidence 4999999988765443 2345678899999999888
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
..+.++|+||||+++++|++|..||.... ............
T Consensus 179 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~------------------------------- 219 (260)
T cd06606 179 EYGRAADIWSLGCTVIEMATGKPPWSELG--------NPMAALYKIGSS------------------------------- 219 (260)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCC--------chHHHHHhcccc-------------------------------
Confidence 88999999999999999999999996544 111111111000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
......+...+..+.++|.+||..||.+||++.|++.||||
T Consensus 220 ------~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 220 ------GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred ------CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 00111233446788999999999999999999999999997
No 268
>KOG1187|consensus
Probab=100.00 E-value=2.1e-36 Score=284.31 Aligned_cols=263 Identities=24% Similarity=0.312 Sum_probs=198.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc-chhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
++|.-...||+|+||.||+|....+ ..||||.+...... ...+.+|+.++..+ .|+|+++++++
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l--------------~H~Nlv~LlGy 139 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRL--------------RHPNLVKLLGY 139 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcC--------------CCcCcccEEEE
Confidence 5788888999999999999966644 88999988765543 45699999999999 89999999999
Q ss_pred ceeecCCCe-EEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCceEEeechh
Q psy12288 107 FKIYSRNGT-HICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENILMCVDYD 182 (393)
Q Consensus 107 ~~~~~~~~~-~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NIl~~~~~~ 182 (393)
+. +.. +.++|+||+ .|+|.+.+.......+++....+|+.+++.||+|||+.+. |+|||||++|||+|.+..
T Consensus 140 C~----e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 140 CL----EGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred Ee----cCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 98 445 699999999 7899888876543268999999999999999999999764 999999999999998884
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-CCC--CC-CCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-HFA--DE-IQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-~~~--~~-~~t~~y~aPE~~~~ 258 (393)
+||+|||+++.... ... .. .||..|++||+...
T Consensus 216 -------------------------------------------aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~ 252 (361)
T KOG1187|consen 216 -------------------------------------------AKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAST 252 (361)
T ss_pred -------------------------------------------EEccCccCcccCCccccceeeecCCCCccCChhhhcc
Confidence 99999999975543 222 22 78999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
+..+.++|||||||+++|+++|+.+........... ...-...... .. +...+.++. -
T Consensus 253 g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~---l~~w~~~~~~--------~~-~~~eiiD~~----------l 310 (361)
T KOG1187|consen 253 GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELS---LVEWAKPLLE--------EG-KLREIVDPR----------L 310 (361)
T ss_pred CCcCcccccccchHHHHHHHhCCcccCCCCCccccc---HHHHHHHHHH--------Cc-chhheeCCC----------c
Confidence 889999999999999999999998776433111111 1110001000 00 111111110 0
Q ss_pred chhHHHHhhhccCCh-hhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 339 WGLYQVLTEKYHWSK-AEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+ ...+. ..-..+..+..+|+..+|.+||++.|+++
T Consensus 311 -------~~-~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 311 -------KE-GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred -------cC-CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 00 11222 34556889999999999999999999754
No 269
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.8e-36 Score=272.57 Aligned_cols=245 Identities=21% Similarity=0.299 Sum_probs=192.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.+.||+|++|.||+|.+..++ .+|+|.+..+....+.+.+|+.+++.+ .|++++++++.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~~ 69 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKL--------------RHDKLVPLYAV 69 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhC--------------CCCCeeeEEEE
Confidence 357999999999999999999876554 589998876555556788899999998 78888888776
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. ....+++|||+ +++|.+.+.......++...+..++.|++.||+|||+. |++|+||+|+||+++.++
T Consensus 70 ~~-----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dl~~~Nill~~~~---- 139 (260)
T cd05069 70 VS-----EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM-NYIHRDLRAANILVGDNL---- 139 (260)
T ss_pred Ec-----CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCC----
Confidence 53 34578999999 67898888765444578899999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++....... ....++..|+|||...+..+
T Consensus 140 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~ 180 (260)
T cd05069 140 ---------------------------------------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 180 (260)
T ss_pred ---------------------------------------eEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCc
Confidence 49999999987553221 12234667999999998889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|+||||+++|+|++ |..||.+.. .......+.. +..
T Consensus 181 ~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~--~~~------------------------------- 221 (260)
T cd05069 181 TIKSDVWSFGILLTELVTKGRVPYPGMV------NREVLEQVER--GYR------------------------------- 221 (260)
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CCC-------------------------------
Confidence 999999999999999999 999997544 1111111111 000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+++++||..||.+||+++++++
T Consensus 222 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 222 --------MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred --------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0112344567889999999999999999999875
No 270
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.1e-36 Score=276.74 Aligned_cols=245 Identities=24% Similarity=0.363 Sum_probs=197.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.+|++.++||.|+||.||+|.+.. +..+++|.+..... ....+.+|+.+++.+ .|++++++++.
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~ 70 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRL--------------RHKHLISLFAV 70 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcC--------------CCcchhheeee
Confidence 469999999999999999999887 88899999875543 456778899999988 78999999887
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....+++|||+ +++|.+++.......++...+..++.|++.||.|||++ |++|+||+|+||+++.++
T Consensus 71 ~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~h~dl~~~nilv~~~~---- 141 (261)
T cd05148 71 CS----VGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGEDL---- 141 (261)
T ss_pred Ee----cCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccCcceEEEcCCc----
Confidence 76 566789999999 77999988765555688999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+....... ....++..|++||.+....++
T Consensus 142 ---------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~ 182 (261)
T cd05148 142 ---------------------------------------VCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFS 182 (261)
T ss_pred ---------------------------------------eEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCC
Confidence 49999999887553221 122346779999999988899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |+.||...+ ....+..+.. +.
T Consensus 183 ~~~DiwslG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~--~~--------------------------------- 221 (261)
T cd05148 183 TKSDVWSFGILLYEMFTYGQVPYPGMN------NHEVYDQITA--GY--------------------------------- 221 (261)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHHHh--CC---------------------------------
Confidence 99999999999999998 899996544 1112221111 00
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.++|.+||..||.+|||+.++++
T Consensus 222 ------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 222 ------RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 00122345678889999999999999999999875
No 271
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.8e-36 Score=275.49 Aligned_cols=242 Identities=24% Similarity=0.429 Sum_probs=194.4
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||.|+||.||+|.+..+++.+++|.+..... ....+.+|+.+++.+ .|+|++++.+.+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~~~~~~--- 63 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA--------------QSPYVVKLYYSFQ--- 63 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC--------------CCcchhHHHHhee---
Confidence 6899999999999999999999999875432 345677888889888 7899999988876
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.+...++++|++ +++|.+.+.+.. .+++..+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~di~~~nil~~~~~--------- 130 (265)
T cd05579 64 -GKKNLYLVMEYLPGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSN-GIIHRDLKPDNILIDSNG--------- 130 (265)
T ss_pred -cCcEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc-CeecCCCCHHHeEEcCCC---------
Confidence 677899999999 678888776643 589999999999999999999998 999999999999998776
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----------CCCCCCCCCCchhHHHhcC
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----------FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||++...... .....++..|++||.....
T Consensus 131 ----------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~ 176 (265)
T cd05579 131 ----------------------------------HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ 176 (265)
T ss_pred ----------------------------------CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCC
Confidence 4999999987654221 1233567889999999888
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
..+.++|+||||+++|++++|..||.... .......+.. +.
T Consensus 177 ~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~--~~------------------------------- 217 (265)
T cd05579 177 GHSKTVDWWSLGCILYEFLVGIPPFHGET------PEEIFQNILN--GK------------------------------- 217 (265)
T ss_pred CCCcchhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhc--CC-------------------------------
Confidence 88999999999999999999999996443 1111111111 00
Q ss_pred hhHHHHhhhccCChh--hHHHHHHHHHhccccCCCCCcCH---HHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKA--EASDFADFLLPMLHVNQKLRASA---ADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~---~ell~hp~~~~~ 389 (393)
..++.. .+..+.+++++||+.+|.+|||+ .++++||||+++
T Consensus 218 ---------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 218 ---------IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred ---------cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 011112 25678899999999999999999 999999999976
No 272
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=5.3e-36 Score=272.25 Aligned_cols=247 Identities=22% Similarity=0.305 Sum_probs=196.7
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.++||+|+||.||+|... .+..+|+|.+..+......+.+|+.+++.+ .|++++++++
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 68 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKL--------------RHDKLVQLYA 68 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhC--------------CCCCEeeeee
Confidence 3468999999999999999999875 457799999887665667788999999998 7899999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .....+++||++ +++|.+.+.......++...+..++.|++.|+++||++ +++|+||+|+||+++.++
T Consensus 69 ~~~----~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~-~i~h~di~p~nili~~~~--- 140 (261)
T cd05034 69 VCS----EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGENL--- 140 (261)
T ss_pred eee----cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcchheEEEcCCC---
Confidence 876 556789999999 67888888765445689999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||.+....... .....+..|+|||.+.+..
T Consensus 141 ----------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~ 180 (261)
T cd05034 141 ----------------------------------------VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGR 180 (261)
T ss_pred ----------------------------------------CEEECccccceeccchhhhhhhccCCCccccCHHHhccCC
Confidence 49999999987654211 1222356799999999888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|++++ |+.||.+.+ ....+..+.....
T Consensus 181 ~~~~~Di~slG~il~~l~t~g~~p~~~~~------~~~~~~~~~~~~~-------------------------------- 222 (261)
T cd05034 181 FTIKSDVWSFGILLTEIVTYGRVPYPGMT------NREVLEQVERGYR-------------------------------- 222 (261)
T ss_pred cCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCC--------------------------------
Confidence 9999999999999999998 999996443 1222222111000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.+...+..+.+++.+||..+|.+||+++++++
T Consensus 223 ---------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 223 ---------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 0111233567889999999999999999999874
No 273
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.3e-36 Score=272.23 Aligned_cols=245 Identities=18% Similarity=0.242 Sum_probs=193.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||++... +..|++|.++... ..+.+.+|+.+++.+ .|++++++++.+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~ 68 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQL--------------RHSNLVQLLGVI 68 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-hHHHHHHHHHHHHhC--------------CCCCeeeEEEEE
Confidence 47999999999999999999654 7789999887543 345678999999998 788999988765
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
.. .+...+++|||+ +++|.+.+.......+++..+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 69 ~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~----- 139 (256)
T cd05082 69 VE---EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-NFVHRDLAARNVLVSEDN----- 139 (256)
T ss_pred Ec---CCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccccchheEEEcCCC-----
Confidence 31 345689999999 67888888765544578899999999999999999998 999999999999998776
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhh
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAAD 266 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D 266 (393)
.++|+|||++...........++..|+|||++.+..++.++|
T Consensus 140 --------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 181 (256)
T cd05082 140 --------------------------------------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 181 (256)
T ss_pred --------------------------------------cEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhh
Confidence 499999999876544433444567899999998888999999
Q ss_pred HHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 267 IWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 267 iwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
||||||++|+|++ |+.||...+. ......+.. +.
T Consensus 182 v~slG~i~~~l~~~g~~p~~~~~~------~~~~~~~~~--~~------------------------------------- 216 (256)
T cd05082 182 VWSFGILLWEIYSFGRVPYPRIPL------KDVVPRVEK--GY------------------------------------- 216 (256)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhc--CC-------------------------------------
Confidence 9999999999997 9999864331 111111100 00
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+|||+.++++.
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 217 --KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred --CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 001123456788899999999999999999999763
No 274
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.9e-36 Score=272.16 Aligned_cols=250 Identities=27% Similarity=0.420 Sum_probs=197.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc------cccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD------QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|++.+.||+|++|.||+|.+..+++.||+|.+... ......+.+|+.+++.+ .|++++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l--------------~h~~i~ 67 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL--------------RHDRIV 67 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc--------------CCCCcc
Confidence 3799999999999999999999999999999987532 11234677899999999 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+.+.. .....+++++|++ +++|.+.+... ..+++..+..++.|++.||.|||++ |++|+||+|+||+++.+
T Consensus 68 ~~~~~~~~--~~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~ 142 (264)
T cd06653 68 QYYGCLRD--PEEKKLSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSN-MIVHRDIKGANILRDSA 142 (264)
T ss_pred eEEEEEEc--CCCCEEEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCC
Confidence 99887652 2345688999999 67888887654 3478899999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE 254 (393)
+ .++|+|||++...... .....++..|+|||
T Consensus 143 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 179 (264)
T cd06653 143 G-------------------------------------------NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPE 179 (264)
T ss_pred C-------------------------------------------CEEECccccccccccccccCccccccCCcccccCHh
Confidence 5 4899999998754321 12235788999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+.+..++.++|+|||||++|+|++|+.||.... ....+.......
T Consensus 180 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~------------------------- 225 (264)
T cd06653 180 VISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE---------AMAAIFKIATQP------------------------- 225 (264)
T ss_pred hhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC---------HHHHHHHHHcCC-------------------------
Confidence 9998888999999999999999999999996432 111222221110
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....++...+..+.++|++||. +|.+||++.++++|||.
T Consensus 226 ------------~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 226 ------------TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ------------CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 0111345567788999999999 57999999999999985
No 275
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.2e-36 Score=272.86 Aligned_cols=247 Identities=28% Similarity=0.450 Sum_probs=192.9
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc------ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+|.+.++||+|+||.||++.+..++..+++|+++... ........|+.+++.+ .|+|+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 66 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL--------------DHPAIVK 66 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC--------------CCCcHHH
Confidence 6899999999999999999998887777777765321 1223456788888887 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+. .....+++|||+ ++++.+.+.. .....+++..+..++.|++.||.+||+. |++|+||+|+||+++.
T Consensus 67 ~~~~~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~~l~~~nili~~ 141 (260)
T cd08222 67 FHASFL----ERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKN 141 (260)
T ss_pred HHHHHh----cCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCChhheEeec
Confidence 999886 556789999999 6777776643 2234588999999999999999999998 9999999999999964
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~ 256 (393)
+ .++|+|||.+...... .....++..|+|||.+
T Consensus 142 ~--------------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~ 177 (260)
T cd08222 142 N--------------------------------------------LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEAL 177 (260)
T ss_pred C--------------------------------------------CEeecccCceeecCCCcccccCCCCCcCccCHHHH
Confidence 3 3899999987654221 2234568889999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHH-hCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL-VGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+..++.++|+||||+++|+|++|..||.... . ....... .+..|
T Consensus 178 ~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~---~~~~~~~~~~~~~------------------------- 223 (260)
T cd08222 178 KHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------F---LSVVLRIVEGPTP------------------------- 223 (260)
T ss_pred ccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------H---HHHHHHHHcCCCC-------------------------
Confidence 88888899999999999999999999995432 1 1111111 11111
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.++...+..+.++|.+||..||++||++.|+++||||
T Consensus 224 --------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 224 --------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred --------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 1234556788999999999999999999999999997
No 276
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.1e-36 Score=268.44 Aligned_cols=249 Identities=28% Similarity=0.449 Sum_probs=200.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
+|++.+.||+|++|.||++.+..+++.+++|.+..... ....+.+|+.+++.+ .|++++++.+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~ 66 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC--------------KHPNIVKYYGSY 66 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhC--------------CCCCEeEEEEEE
Confidence 48899999999999999999998999999999876543 456788899999998 788999998887
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+...++++||+ +++|.+.+.... ..++...+..++.|++.|+++||.. |++|+||+|+||+++.++
T Consensus 67 ~----~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~-~i~h~dl~p~ni~i~~~~----- 135 (253)
T cd05122 67 L----KKDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLTSDG----- 135 (253)
T ss_pred e----cCCeEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC-CEecCCCCHHHEEEccCC-----
Confidence 6 556789999999 578777776543 4589999999999999999999997 999999999999998765
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCCCCCCCchhHHHhcCCCCch
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||.+....... ....++..|++||.+.+..++.+
T Consensus 136 --------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~ 177 (253)
T cd05122 136 --------------------------------------EVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYK 177 (253)
T ss_pred --------------------------------------eEEEeeccccccccccccccceecCCcccCHHHHcCCCCCcc
Confidence 49999999887665432 44567889999999998888999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|+||||+++|+|++|..||...+. ......... ...+.
T Consensus 178 ~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~--~~~~~--------------------------------- 216 (253)
T cd05122 178 ADIWSLGITAIELAEGKPPYSELPP------MKALFKIAT--NGPPG--------------------------------- 216 (253)
T ss_pred ccHHHHHHHHHHHHhCCCCCCCCch------HHHHHHHHh--cCCCC---------------------------------
Confidence 9999999999999999999965431 111111110 00000
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
.......+..+.++|.+||..||.+|||+.|+++|||
T Consensus 217 ----~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 217 ----LRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ----cCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0001112567889999999999999999999999999
No 277
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.8e-36 Score=271.84 Aligned_cols=245 Identities=18% Similarity=0.264 Sum_probs=196.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.+|++.+.||.|++|.||+|... ++.||+|.+.......+.+.+|+.+++.+ .|+|++++++.+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~ 69 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTL--------------RHPNLVQLLGVV 69 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhc--------------CCcceeeeEEEE
Confidence 57999999999999999999764 78899999886654456788899999998 789999999887
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....++|||++ +++|.+++.......+++..+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 70 ~----~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~Nili~~~~----- 139 (256)
T cd05039 70 L----QGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDL----- 139 (256)
T ss_pred c----CCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccchhcccceEEEeCCC-----
Confidence 6 466789999999 57988888765544689999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhh
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAAD 266 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D 266 (393)
.++|+|||.+............+..|+|||.+.+..++.++|
T Consensus 140 --------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~D 181 (256)
T cd05039 140 --------------------------------------VAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSD 181 (256)
T ss_pred --------------------------------------CEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHH
Confidence 489999999887644433444567799999998888899999
Q ss_pred HHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 267 IWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 267 iwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
+||||+++|++++ |..||...+. ......+.. +.
T Consensus 182 i~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~--~~------------------------------------- 216 (256)
T cd05039 182 VWSFGILLWEIYSFGRVPYPRIPL------KDVVPHVEK--GY------------------------------------- 216 (256)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHhc--CC-------------------------------------
Confidence 9999999999997 9999964431 111110000 00
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..+|++|||++++++.
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 217 --RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred --CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 001123345788899999999999999999999863
No 278
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.5e-36 Score=273.81 Aligned_cols=244 Identities=19% Similarity=0.308 Sum_probs=192.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+|++.+.||+|+||.||+|.+. ++..+|+|.+.........+.+|+.+++.+ .|+|++++++.+.
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~~ 69 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKL--------------SHPNLVQLYGVCT 69 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhC--------------CCCCEEEEEEEEc
Confidence 6889999999999999999876 466799999876554556778899999998 7899999988776
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.....++|||++ +++|.+++.... ..+++..+..++.|++.|+++||++ |++|+||||+||+++.++
T Consensus 70 ----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~ni~i~~~~------ 137 (256)
T cd05059 70 ----KQRPIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESN-GFIHRDLAARNCLVGEDN------ 137 (256)
T ss_pred ----CCCceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHhhEEECCCC------
Confidence 556789999999 778888876543 3588999999999999999999998 999999999999998766
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-C---CCCCCCCCchhHHHhcCCCCc
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-A---DEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-~---~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++++|||.++...... . ...++..|+|||.+.+..++.
T Consensus 138 -------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~ 180 (256)
T cd05059 138 -------------------------------------VVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSS 180 (256)
T ss_pred -------------------------------------cEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCc
Confidence 49999999887543221 1 112345799999999888999
Q ss_pred hhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++|+||||+++|++++ |..||...+. ......+.. +.
T Consensus 181 ~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~--~~---------------------------------- 218 (256)
T cd05059 181 KSDVWSFGVLMWEVFSEGKMPYERFSN------SEVVESVSA--GY---------------------------------- 218 (256)
T ss_pred hhhHHHHHHHHHHHhccCCCCCCCCCH------HHHHHHHHc--CC----------------------------------
Confidence 9999999999999998 8999965431 111111111 00
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|++|||+.|+++.
T Consensus 219 -----~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 219 -----RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred -----cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 001123456788999999999999999999999864
No 279
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.5e-36 Score=276.09 Aligned_cols=249 Identities=20% Similarity=0.313 Sum_probs=190.8
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
.+++|++.++||+|+||.||+|.+.. ++..||+|.+.... .....+.+|+.+++.+ .|+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~ 69 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF--------------NCH 69 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCC
Confidence 45789999999999999999998653 35679999876432 1234567888888888 889
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
|++++++.+. .+...++||||+ +++|.+++.... ...++...+..++.|++.||+|||+. |++|+|
T Consensus 70 ~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~vH~d 144 (277)
T cd05062 70 HVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRD 144 (277)
T ss_pred CeeeEEEEEc----CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCC
Confidence 9999988875 566799999998 778888775432 12356778889999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADE 244 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~ 244 (393)
|||+||+++.++ .++|+|||++...... ....
T Consensus 145 lkp~Nil~~~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~ 181 (277)
T cd05062 145 LAARNCMVAEDF-------------------------------------------TVKIGDFGMTRDIYETDYYRKGGKG 181 (277)
T ss_pred cchheEEEcCCC-------------------------------------------CEEECCCCCccccCCcceeecCCCC
Confidence 999999998665 4999999998754321 1123
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
.++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+. ......+.. +..
T Consensus 182 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~------~~~~~~~~~--~~~-------------- 239 (277)
T cd05062 182 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN------EQVLRFVME--GGL-------------- 239 (277)
T ss_pred ccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHc--CCc--------------
Confidence 44678999999998889999999999999999998 7889865431 111111110 100
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..||++|||+.|++++
T Consensus 240 -------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 240 -------------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01123345678899999999999999999999875
No 280
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.5e-35 Score=269.98 Aligned_cols=248 Identities=25% Similarity=0.359 Sum_probs=195.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.++.. ....+.+.+|+.+++.+ .|++++++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~--------------~~~~i~~~ 67 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL--------------DHPNVIKY 67 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC--------------CCCCeeee
Confidence 4799999999999999999999999999999987632 22245678899999998 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+. .+...+++|||+ +++|.+++... ....++...+..++.|++.||+|||+. |++|+||+|+||+++.+
T Consensus 68 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~nil~~~~ 142 (267)
T cd08224 68 LASFI----ENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFITAT 142 (267)
T ss_pred eeeee----cCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecCCcChhhEEECCC
Confidence 99887 566789999999 67888877542 223478999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~ 257 (393)
+ .++|+|||.+...... .....++..|+|||.+.
T Consensus 143 ~-------------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~ 179 (267)
T cd08224 143 G-------------------------------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179 (267)
T ss_pred C-------------------------------------------cEEEeccceeeeccCCCcccceecCCccccCHHHhc
Confidence 6 4899999988755332 22346788899999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++|+||||+++|+|++|+.||...... .......+.. +..+
T Consensus 180 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~--~~~~--------------------------- 226 (267)
T cd08224 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIEK--CDYP--------------------------- 226 (267)
T ss_pred cCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHHHHhhhhc--CCCC---------------------------
Confidence 888999999999999999999999999643311 0000000000 0000
Q ss_pred cchhHHHHhhhccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
+.+ ...+..+.++|.+||..+|.+|||+.++++
T Consensus 227 ------------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 227 ------------PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ------------CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 011 134567889999999999999999999875
No 281
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=7.9e-36 Score=278.69 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=198.6
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|...++||+|+||.||+|.+..+++.|++|.+..... ....+.+|+.+++.+ .|+|++++.
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 87 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL--------------KHPNTIEYK 87 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC--------------CCCCCccEE
Confidence 58888999999999999999999999999998864322 224567888999988 789999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .....++||||+.+++.+.+.... ..++..++..++.|++.|++|||++ |++|+||+|+||+++.++
T Consensus 88 ~~~~----~~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dl~p~nili~~~~--- 158 (313)
T cd06633 88 GCYL----KEHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPG--- 158 (313)
T ss_pred EEEE----eCCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChhhEEECCCC---
Confidence 8887 567789999999888888776543 4588999999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh---cCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI---GAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~ 261 (393)
.++|+|||++.... ......++..|+|||.+. ...+
T Consensus 159 ----------------------------------------~~kL~dfg~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~ 197 (313)
T cd06633 159 ----------------------------------------QVKLADFGSASKSS-PANSFVGTPYWMAPEVILAMDEGQY 197 (313)
T ss_pred ----------------------------------------CEEEeecCCCcccC-CCCCccccccccChhhccccCCCCC
Confidence 49999999876432 223456788999999985 3457
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||...+. ...+..+.. ...|..
T Consensus 198 ~~~sDv~slGvil~el~~g~~p~~~~~~------~~~~~~~~~--~~~~~~----------------------------- 240 (313)
T cd06633 198 DGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQ--NDSPTL----------------------------- 240 (313)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHh--cCCCCC-----------------------------
Confidence 8899999999999999999999965441 111111111 000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....+..+.+|+.+||..+|.+||++.+++.||||+...
T Consensus 241 ---------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 241 ---------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred ---------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 0112345678999999999999999999999999998754
No 282
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.8e-36 Score=278.03 Aligned_cols=252 Identities=24% Similarity=0.388 Sum_probs=196.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.|+...+||+|+||.||++....+++.||+|.+.... .....+.+|+.+++.+ .|+|++++++.+
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~ 86 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY--------------QHENVVEMYNSY 86 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhc--------------CCcchhheeeEE
Confidence 3444568999999999999999999999999875322 2345577899999988 789999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+.+.+++|||+ ++++.+.+.. ..+++..+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 87 ~----~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-givH~dl~p~Nilv~~~~----- 153 (292)
T cd06657 87 L----VGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQ-GVIHRDIKSDSILLTHDG----- 153 (292)
T ss_pred E----eCCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC-----
Confidence 7 567899999999 5566665433 2478999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||.+...... .....++..|++||.+.+..++.
T Consensus 154 --------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~ 195 (292)
T cd06657 154 --------------------------------------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGP 195 (292)
T ss_pred --------------------------------------CEEEcccccceecccccccccccccCccccCHHHhcCCCCCc
Confidence 4999999987654322 12245788999999998888899
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+||+|+++|+|++|..||.... ....+..+... .|.
T Consensus 196 ~~Dv~slGvil~el~tg~~p~~~~~------~~~~~~~~~~~---~~~-------------------------------- 234 (292)
T cd06657 196 EVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDN---LPP-------------------------------- 234 (292)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhh---CCc--------------------------------
Confidence 9999999999999999999996533 11121111110 000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
........+..+.+++.+||..||.+||++.++++||||....
T Consensus 235 ----~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 235 ----KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred ----ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 0000123455678999999999999999999999999998764
No 283
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=3.9e-36 Score=278.48 Aligned_cols=258 Identities=19% Similarity=0.298 Sum_probs=196.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.++.... ....+..|+.++... ..|+|++++++
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~-------------~~~~~i~~~~~ 81 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKS-------------HDCPYIVKCYG 81 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhc-------------cCCCchHhhhe
Confidence 579999999999999999999999999999999875422 223344555555444 16899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....+++||++++++.+.+.... ..+++..+..++.|++.|++|||+..|++||||+|+||+++.++
T Consensus 82 ~~~----~~~~~~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~---- 152 (296)
T cd06618 82 YFI----TDSDVFICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG---- 152 (296)
T ss_pred eee----cCCeEEEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC----
Confidence 887 566799999999887777765533 35889999999999999999999733999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCC---
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG--- 260 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~--- 260 (393)
.++|+|||.+...... .....++..|+|||.+.+..
T Consensus 153 ---------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 193 (296)
T cd06618 153 ---------------------------------------NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNP 193 (296)
T ss_pred ---------------------------------------CEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCcc
Confidence 4999999998755322 22335678899999987653
Q ss_pred -CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 -YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 -~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|+|++|+.||..... ....+. ........
T Consensus 194 ~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~---~~~~~~~~---------------------------- 237 (296)
T cd06618 194 KYDIRADVWSLGISLVELATGQFPYKNCKT-----EFEVLT---KILQEEPP---------------------------- 237 (296)
T ss_pred ccccchhHHHHHHHHHHHHhCCCCCCcchh-----HHHHHH---HHhcCCCC----------------------------
Confidence 78899999999999999999999954221 111111 11111000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+.....+..+.+||.+||..||.+||+++++++||||....
T Consensus 238 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 238 --------SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred --------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 0000112456788999999999999999999999999998654
No 284
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=9e-36 Score=269.25 Aligned_cols=247 Identities=29% Similarity=0.477 Sum_probs=200.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.|++|.+..... ..+.+.+|++++..+ .|++++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL--------------KHPNIVKYIG 66 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC--------------CCCCccEEEE
Confidence 58999999999999999999999999999999876542 345678899999988 7888988888
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...+++||++ +++|.+.+... ..+++..+..++.|++.|+.+||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~--- 136 (254)
T cd06627 67 SIE----TSDSLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILTTKDG--- 136 (254)
T ss_pred EEE----eCCEEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEECCCC---
Confidence 876 557799999999 66887777654 4589999999999999999999998 999999999999997655
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||.+....... ....++..|++||...+..+
T Consensus 137 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~ 176 (254)
T cd06627 137 ----------------------------------------VVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGA 176 (254)
T ss_pred ----------------------------------------CEEEeccccceecCCCcccccccccchhhcCHhhhcCCCC
Confidence 49999999987654332 23457889999999988778
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||..... ......... .
T Consensus 177 ~~~~Dv~~lG~~l~~l~~g~~p~~~~~~------~~~~~~~~~--~---------------------------------- 214 (254)
T cd06627 177 STASDIWSLGCTVIELLTGNPPYYDLNP------MAALFRIVQ--D---------------------------------- 214 (254)
T ss_pred CcchhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHhc--c----------------------------------
Confidence 8999999999999999999999964331 111111100 0
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....++...+..+.+++.+||..+|++|||+.+++.||||
T Consensus 215 -----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 215 -----DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 0111234456788899999999999999999999999997
No 285
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=9.3e-36 Score=276.78 Aligned_cols=253 Identities=19% Similarity=0.276 Sum_probs=194.6
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
....++|.+.+.||+|+||.||+|... .++..||+|.++... ...+.+.+|+.+++.+. .
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~ 97 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG-------------N 97 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc-------------C
Confidence 344578999999999999999999753 345679999887532 22356788999999883 5
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+|++++++.+. ..+..+++|||+ +++|.+++.......+++.++..++.|++.||+|||++ +++|+||||+||
T Consensus 98 h~~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Ni 172 (302)
T cd05055 98 HENIVNLLGACT----IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNV 172 (302)
T ss_pred CCCcceEEEEEe----cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeehhhhccceE
Confidence 889999998876 556789999998 68888888654434488999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQY 250 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y 250 (393)
+++.++ .++++|||++....... ....++..|
T Consensus 173 l~~~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y 209 (302)
T cd05055 173 LLTHGK-------------------------------------------IVKICDFGLARDIMNDSNYVVKGNARLPVKW 209 (302)
T ss_pred EEcCCC-------------------------------------------eEEECCCcccccccCCCceeecCCCCccccc
Confidence 997655 48999999987543221 122346789
Q ss_pred chhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 251 RSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 251 ~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
+|||.+.+..++.++||||+||++|+|++ |..||.+... ......... .+..
T Consensus 210 ~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~------~~~~~~~~~-~~~~-------------------- 262 (302)
T cd05055 210 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV------DSKFYKLIK-EGYR-------------------- 262 (302)
T ss_pred CCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc------hHHHHHHHH-cCCc--------------------
Confidence 99999998889999999999999999998 9999975442 111111110 0000
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..+|++|||+.|+++.
T Consensus 263 -------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 263 -------------------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred -------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 00112345678899999999999999999999863
No 286
>KOG0665|consensus
Probab=100.00 E-value=2.2e-37 Score=270.76 Aligned_cols=293 Identities=31% Similarity=0.435 Sum_probs=231.2
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec---ccccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++-.||.-+.-+|.|+- .|-.|.+...++.||+|.+.. ......+..+|+.++..+ .|+|++
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v--------------~~~nii 78 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV--------------NHKNII 78 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh--------------ccccee
Confidence 34568999999999999 788898999999999997643 244567788999999999 899999
Q ss_pred eccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 102 RLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 102 ~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+|..... .-..+++|||++..++...+... +.-+.+..++.|++.|+.+||+. ||+||||||+||++..
T Consensus 79 ~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~~e----lDH~tis~i~yq~~~~ik~lhs~-~IihRdLkPsnivv~~ 153 (369)
T KOG0665|consen 79 SLLNVFTPQKTLEEFQEVYLVMELMDANLCQVILME----LDHETISYILYQMLCGIKHLHSA-GIIHRDLKPSNIVVNS 153 (369)
T ss_pred eeeeccCccccHHHHHhHHHHHHhhhhHHHHHHHHh----cchHHHHHHHHHHHHHHHHHHhc-ceeecccCcccceecc
Confidence 99998864321 22357899999999999888733 67789999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~ 257 (393)
+. .+|+.|||+++..+.. .++.+.|..|+|||++.
T Consensus 154 ~~-------------------------------------------~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil 190 (369)
T KOG0665|consen 154 DC-------------------------------------------TLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVIL 190 (369)
T ss_pred hh-------------------------------------------heeeccchhhcccCcccccCchhheeeccCchhee
Confidence 76 4999999999876543 55678899999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC---CCeeecc
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ---GNFRRID 334 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~ 334 (393)
+.++...+||||+||++.||+.|...|++.. ..++.-.+++.+|.....+..+....-+.+-.. .......
T Consensus 191 ~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d------~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~ 264 (369)
T KOG0665|consen 191 GMGYKENVDIWSVGCIMGELILGTVLFPGKD------HIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFS 264 (369)
T ss_pred ccCCcccchhhhhhhHHHHHhhceEEecCch------HHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchh
Confidence 9999999999999999999999999999766 788888999999988777766655443333221 0111111
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+... ++...+.+...+..+.+++.+||..||++|.+++++|+||||+ +|
T Consensus 265 ~~fpD~~---f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~-vw 316 (369)
T KOG0665|consen 265 ELFPDSL---FPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK-VW 316 (369)
T ss_pred hhCCccc---ccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee-ee
Confidence 1111100 1111222334567888999999999999999999999999998 54
No 287
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5e-36 Score=276.32 Aligned_cols=256 Identities=29% Similarity=0.433 Sum_probs=204.9
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..+.|++.+.||+|++|.||+|.+..++..|++|++.........+.+|+..++.+ .|+|++++++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 82 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC--------------KHPNIVDYYD 82 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHC--------------CCCCeeEEEE
Confidence 45689999999999999999999998899999999876543456678899999988 7899999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .....++++||+ +++|.+.+.... ..++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 83 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~-gi~H~dl~p~ni~i~~~~--- 153 (286)
T cd06614 83 SYL----VGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILLSKDG--- 153 (286)
T ss_pred EEE----ECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCChhhEEEcCCC---
Confidence 887 457899999999 588888887653 3589999999999999999999998 999999999999998666
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|++||.+.+..+
T Consensus 154 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 193 (286)
T cd06614 154 ----------------------------------------SVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDY 193 (286)
T ss_pred ----------------------------------------CEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCC
Confidence 4999999987654322 123346788999999988888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||...+. ......+.. .+. +.
T Consensus 194 ~~~~Dv~slGvil~~l~~g~~p~~~~~~------~~~~~~~~~-~~~-~~------------------------------ 235 (286)
T cd06614 194 GPKVDIWSLGIMCIEMAEGEPPYLREPP------LRALFLITT-KGI-PP------------------------------ 235 (286)
T ss_pred CCccccHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-cCC-CC------------------------------
Confidence 9999999999999999999999964331 111111100 000 00
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.......+..+.++|++||+.+|.+|||+.++++||||+..
T Consensus 236 -------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 236 -------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred -------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 00011245678899999999999999999999999999984
No 288
>KOG0668|consensus
Probab=100.00 E-value=9.3e-38 Score=261.14 Aligned_cols=300 Identities=23% Similarity=0.416 Sum_probs=222.5
Q ss_pred CCCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcc
Q psy12288 11 EYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSS 90 (393)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~ 90 (393)
+|+-=....+.-|+ .++|++.+++|+|.|+.||.|.+..+++.++||+++.- ....+.+|+.+|+.+.
T Consensus 23 eYWdYE~~~i~wg~--~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--kkkKIkREikIL~nL~-------- 90 (338)
T KOG0668|consen 23 EYWDYESLVIDWGN--QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV--KKKKIKREIKILQNLR-------- 90 (338)
T ss_pred hhcchhheeeeccc--cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH--HHHHHHHHHHHHHhcc--------
Confidence 34443333444443 57899999999999999999999999999999999853 3578899999999994
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
+++||++++++... +....+.+|+|++...-+..+- ++++.-.++.++.++++||.|+|+. ||.|||+
T Consensus 91 -----gg~NIi~L~DiV~D--p~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~-GImHRDV 158 (338)
T KOG0668|consen 91 -----GGPNIIKLLDIVKD--PESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSM-GIMHRDV 158 (338)
T ss_pred -----CCCCeeehhhhhcC--ccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhc-CcccccC
Confidence 79999999999873 3556688999999655555443 3478889999999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTR 248 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~t~ 248 (393)
||.|++++.... .++|+|+|+|....... .-.+.+.
T Consensus 159 KPhNvmIdh~~r------------------------------------------kLrlIDWGLAEFYHp~~eYnVRVASR 196 (338)
T KOG0668|consen 159 KPHNVMIDHELR------------------------------------------KLRLIDWGLAEFYHPGKEYNVRVASR 196 (338)
T ss_pred Ccceeeechhhc------------------------------------------eeeeeecchHhhcCCCceeeeeeehh
Confidence 999999976543 48999999998775443 3446688
Q ss_pred CCchhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCC-CCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 249 QYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFD-PKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 249 ~y~aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~-~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
.|.-||++..-+ |..+.|+|||||++..|++.+-||- +.+ ..+++..|.+++|.-- +..=..+..--.++
T Consensus 197 yfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d------N~DQLVkIakVLGt~e--l~~Yl~KY~i~Ldp 268 (338)
T KOG0668|consen 197 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD------NYDQLVKIAKVLGTDE--LYAYLNKYQIDLDP 268 (338)
T ss_pred hcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCC------CHHHHHHHHHHhChHH--HHHHHHHHccCCCh
Confidence 999999998754 7899999999999999999888774 444 7789999999988421 11100111000111
Q ss_pred CCCeeeccC---CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 327 QGNFRRIDN---LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 327 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
. +..+.+ ..+|..+ +-.++- .-.+++++||+.++|..|-++|+||+|++.||||..+.
T Consensus 269 ~--~~~i~~~~~rk~w~~F-i~~~n~---hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 269 Q--FEDILGRHSRKPWSRF-INSENQ---HLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred h--HhhHhhccccccHHHh-CCcccc---ccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 0 000000 1111110 011111 23457889999999999999999999999999998654
No 289
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5.6e-36 Score=276.35 Aligned_cols=246 Identities=21% Similarity=0.334 Sum_probs=191.4
Q ss_pred CeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++|.+.+.||+|+||.||++... .++..+|+|.+.... .....+.+|+.+++.+ .|++++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~ 70 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL--------------QHEHIV 70 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC--------------CCCCcc
Confidence 57999999999999999999753 345678999886432 2345678899999998 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-----------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
++.+.+. .+..++++|||+ +++|.+++.... ...+++..+..++.|++.||+|||++ |++|||
T Consensus 71 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~-~i~H~d 145 (288)
T cd05093 71 KFYGVCV----EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRD 145 (288)
T ss_pred eEEEEEe----cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-Ceeecc
Confidence 9998876 567799999999 788888775432 12488999999999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADE 244 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~ 244 (393)
|||+||+++.++ .++|+|||++....... ...
T Consensus 146 lkp~Nili~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~ 182 (288)
T cd05093 146 LATRNCLVGENL-------------------------------------------LVKIGDFGMSRDVYSTDYYRVGGHT 182 (288)
T ss_pred cCcceEEEccCC-------------------------------------------cEEeccCCccccccCCceeecCCCC
Confidence 999999998766 49999999987553221 122
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
.++..|+|||.+.+..++.++|+|||||++|+|++ |..||..... ......+.. +..+
T Consensus 183 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~------~~~~~~i~~--~~~~------------- 241 (288)
T cd05093 183 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NEVIECITQ--GRVL------------- 241 (288)
T ss_pred CccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHc--CCcC-------------
Confidence 34678999999998889999999999999999998 9999965441 111111111 1100
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+...+..+.+|+.+||..||.+|||+++++.
T Consensus 242 --------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 242 --------------------------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred --------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 011234567899999999999999999999864
No 290
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.6e-36 Score=275.10 Aligned_cols=247 Identities=17% Similarity=0.261 Sum_probs=190.9
Q ss_pred CeEEEEEEecccCceEEEEEEeC----CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL----QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++|++.++||+|+||.||+|... .++..|++|.+..... ....+.+|+.+++.+ .|+|++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv 70 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL--------------HHPNIV 70 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC--------------CCCCee
Confidence 46899999999999999999853 3457899998874322 224577899999998 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD---------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~---------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
++++.+. .+...+++|||+ +++|.+++.... ...++...+..++.|++.||+|||++ |+
T Consensus 71 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i 145 (283)
T cd05090 71 CLLGVVT----QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-FF 145 (283)
T ss_pred eEEEEEe----cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-Ce
Confidence 9998876 566789999999 678888774321 12367888899999999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----- 240 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----- 240 (393)
+|+||||+||+++.+. .++|+|||++......
T Consensus 146 ~H~dlkp~nili~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~ 182 (283)
T cd05090 146 VHKDLAARNILIGEQL-------------------------------------------HVKISDLGLSREIYSADYYRV 182 (283)
T ss_pred ehhccccceEEEcCCC-------------------------------------------cEEeccccccccccCCcceec
Confidence 9999999999998665 4899999998754322
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
.....++..|+|||.+.+..++.++|+||||+++|+|++ |..||.+.+ .......+ ....
T Consensus 183 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~------~~~~~~~~-~~~~------------ 243 (283)
T cd05090 183 QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS------NQEVIEMV-RKRQ------------ 243 (283)
T ss_pred ccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHH-HcCC------------
Confidence 122334667999999988889999999999999999998 999996543 11111111 1000
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||+.||++||++.+++++
T Consensus 244 ----------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 244 ----------------------------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred ----------------------------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 001223455678899999999999999999999876
No 291
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1e-35 Score=275.44 Aligned_cols=272 Identities=16% Similarity=0.152 Sum_probs=188.5
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCC---CceEEEEEEecccccchhhHHHHHHHHHhcccCCCCc-ccccCcc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS-SAYNTQA 96 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~-~~~~~~~ 96 (393)
.+.+..+.+|++.++||+|+||.||+|.+..+ +..+++|+..... +....|...++.+.....+.. .......
T Consensus 5 ~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~---~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 81 (294)
T PHA02882 5 PLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN---ETIVMETLVYNNIYDIDKIALWKNIHNID 81 (294)
T ss_pred eeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccC---CchhhHHHHHHhhhhHHHHHHHHHhccCC
Confidence 46777788999999999999999999998877 6677888644221 122223222222211110000 0011236
Q ss_pred cccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
|++++++++..........+.+++++++..++.+.+... ...+...+..++.|++.||+|||+. +++||||||+|||
T Consensus 82 h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~iiHrDiKp~Nil 158 (294)
T PHA02882 82 HLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEH-GISHGDIKPENIM 158 (294)
T ss_pred CCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEE
Confidence 888888887665433334466888998877777666543 2357788899999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----------CCCCCCC
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----------HFADEIQ 246 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----------~~~~~~~ 246 (393)
++.++ .++|+|||+++.... ......|
T Consensus 159 l~~~~-------------------------------------------~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~g 195 (294)
T PHA02882 159 VDGNN-------------------------------------------RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRG 195 (294)
T ss_pred EcCCC-------------------------------------------cEEEEEcCCceeeccCCcccccccccccccCC
Confidence 97665 489999999875421 1122368
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHH-HHHhCCCChHHHhcCcccccccC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHI-VELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
|+.|+|||+..+..++.++|||||||++|+|++|..||...+... ...... ......+
T Consensus 196 t~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-----~~~~~~~~~~~~~~---------------- 254 (294)
T PHA02882 196 TLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-----NLIHAAKCDFIKRL---------------- 254 (294)
T ss_pred CccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-----HHHHHhHHHHHHHh----------------
Confidence 999999999999999999999999999999999999997653211 000000 0000100
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....... ...+..+.+++..|+..+|++||+.+++++
T Consensus 255 -------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 255 -------------------HEGKIKI-KNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred -------------------hhhhhcc-CCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 0000011 233567889999999999999999999875
No 292
>KOG1026|consensus
Probab=100.00 E-value=4.2e-37 Score=300.54 Aligned_cols=244 Identities=22% Similarity=0.334 Sum_probs=201.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+-++.+.||+|+||.||+|+...- .+.||||.++.... ..++|++|++++..+ .|+|||
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l--------------~H~nIV 552 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL--------------QHPNIV 552 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc--------------cCCCeE
Confidence 456789999999999999976543 35799999985433 467899999999999 999999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------CC----CCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------YK----GIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~----~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
++++.+. .+...++|+||| -|||..++.... .. .++..+.+.|+.||+.|++||-++ ..|||
T Consensus 553 rLlGVC~----~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~-~FVHR 627 (774)
T KOG1026|consen 553 RLLGVCR----EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH-HFVHR 627 (774)
T ss_pred EEEEEEc----cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-ccccc
Confidence 9999998 788899999999 899999886432 12 278889999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCC----
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---- 244 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~---- 244 (393)
||-.+|+||..+- .+|++|||+++..-......
T Consensus 628 DLATRNCLVge~l-------------------------------------------~VKIsDfGLsRdiYssDYYk~~~~ 664 (774)
T KOG1026|consen 628 DLATRNCLVGENL-------------------------------------------VVKISDFGLSRDIYSSDYYKVRGN 664 (774)
T ss_pred chhhhhceeccce-------------------------------------------EEEecccccchhhhhhhhhcccCC
Confidence 9999999998766 59999999998764433222
Q ss_pred -CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc
Q psy12288 245 -IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322 (393)
Q Consensus 245 -~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~ 322 (393)
.-+..||+||.+...+||++|||||+||++||+++ |+-||.+.+.. +.++.+.. |
T Consensus 665 t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~------EVIe~i~~--g--------------- 721 (774)
T KOG1026|consen 665 TLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ------EVIECIRA--G--------------- 721 (774)
T ss_pred ceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH------HHHHHHHc--C---------------
Confidence 33678999999999999999999999999999999 99999887732 22222211 1
Q ss_pred ccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh
Q psy12288 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381 (393)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 381 (393)
...+.|..++.++.+||.+||+.+|.+||+++||-
T Consensus 722 ------------------------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 722 ------------------------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred ------------------------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 11335678899999999999999999999999863
No 293
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.3e-35 Score=277.63 Aligned_cols=254 Identities=23% Similarity=0.324 Sum_probs=199.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
...|+..+.||+|+||.||+|.+..++..||+|.+..... ....+.+|+.+++.+ .|+|+++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~ 89 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI--------------KHPNSIE 89 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC--------------CCCCEEE
Confidence 3468899999999999999999999999999998864321 123567788899888 7899999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++.+. .+...++||||+.+++.+.+.... ..+++..+..++.|++.||.|||++ |++|+||+|+||+++.++
T Consensus 90 ~~~~~~----~~~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~dL~p~Nil~~~~~- 162 (317)
T cd06635 90 YKGCYL----REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPG- 162 (317)
T ss_pred EEEEEe----eCCeEEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcccEEECCCC-
Confidence 999887 566789999999888887775433 4488999999999999999999998 999999999999997765
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh---cC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI---GA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~---~~ 259 (393)
.++|+|||++..... .....++..|+|||.+. ..
T Consensus 163 ------------------------------------------~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~ 199 (317)
T cd06635 163 ------------------------------------------QVKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEG 199 (317)
T ss_pred ------------------------------------------CEEEecCCCccccCC-cccccCCccccChhhhhcCCCC
Confidence 499999998764432 23446788999999985 34
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+|||||++|+|++|+.||.... .......+.....+ .
T Consensus 200 ~~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~~~~~--~---------------------------- 243 (317)
T cd06635 200 QYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESP--T---------------------------- 243 (317)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHhccCC--C----------------------------
Confidence 57889999999999999999999986432 11111111110000 0
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
......+..+.+++.+||..+|.+||++.++++|+|+....
T Consensus 244 ----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 244 ----------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred ----------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 00123456788999999999999999999999999987654
No 294
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5.6e-36 Score=279.05 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=199.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
...|+..+.||+|++|.||+|.+..+++.+++|.+.... .....+.+|+.+++.+ .|+++++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 79 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL--------------RHPNTIQ 79 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC--------------CCCCccc
Confidence 346888999999999999999999999999999876421 1224566789999998 7889999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+.+. .....++||||+.+++.+.+.... ..++..++..++.|++.|+.|||++ +++|+||+|+||+++.++
T Consensus 80 ~~~~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nil~~~~~- 152 (308)
T cd06634 80 YRGCYL----REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPG- 152 (308)
T ss_pred EEEEEE----cCCeeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHhEEECCCC-
Confidence 988877 556789999999888887765433 4488999999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc---C
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG---A 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~---~ 259 (393)
.++|+|||++..... .....++..|+|||.+.+ .
T Consensus 153 ------------------------------------------~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~ 189 (308)
T cd06634 153 ------------------------------------------LVKLGDFGSASIMAP-ANXFVGTPYWMAPEVILAMDEG 189 (308)
T ss_pred ------------------------------------------cEEECCcccceeecC-cccccCCccccCHHHHhhcccC
Confidence 499999998765433 234467889999999853 3
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|||||||++|+|++|..||...+. ......+.. +..|.
T Consensus 190 ~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~--~~~~~---------------------------- 233 (308)
T cd06634 190 QYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQ--NESPA---------------------------- 233 (308)
T ss_pred CCCcccchHHHHHHHHHHHcCCCCCccccH------HHHHHHHhh--cCCCC----------------------------
Confidence 578899999999999999999999864321 111111100 00000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
......+..+.++|++||..+|.+||++.++++|||+.....
T Consensus 234 ----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~ 275 (308)
T cd06634 234 ----------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275 (308)
T ss_pred ----------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCC
Confidence 001245667889999999999999999999999999987653
No 295
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6.6e-36 Score=272.57 Aligned_cols=249 Identities=24% Similarity=0.329 Sum_probs=194.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|++|.||+|.+..++..+++|.+.... .....+.+|+.+++.+ .|+|++++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~ 67 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL--------------NHPNVIKY 67 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc--------------cCCchhhh
Confidence 46899999999999999999999999999999876421 2235667899999998 88999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+. .++..+++||++ +++|.+.+... ....+++..+..++.|++.||+|||++ |++|+||+|+||+++.+
T Consensus 68 ~~~~~----~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~ 142 (267)
T cd08229 68 YASFI----EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITAT 142 (267)
T ss_pred hheeE----eCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCC
Confidence 99887 566899999999 67887776532 223478899999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~ 257 (393)
+ .++++|||.+...... .....++..|+|||.+.
T Consensus 143 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~ 179 (267)
T cd08229 143 G-------------------------------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179 (267)
T ss_pred C-------------------------------------------CEEECcchhhhccccCCcccccccCCcCccCHHHhc
Confidence 6 4999999987655322 22346788999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++|+||||+++|+|++|..||...... .......+... ..|.
T Consensus 180 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~--~~~~-------------------------- 227 (267)
T cd08229 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIEQC--DYPP-------------------------- 227 (267)
T ss_pred CCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhhhhhcC--CCCC--------------------------
Confidence 888899999999999999999999999643311 00111111000 0000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+...+..+.+++.+||..||.+|||+.++++
T Consensus 228 ------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 228 ------------LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ------------CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 001235668889999999999999999998775
No 296
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-35 Score=274.39 Aligned_cols=255 Identities=22% Similarity=0.359 Sum_probs=197.6
Q ss_pred eEEEEEEecccCceEEEEEEeC---CCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.|++.+.||.|+||.||+|.+. .+++.||+|++.... ...+.+.+|+.+++.+. .|+++
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-------------~~~~i 67 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-------------QSPFL 67 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc-------------cCCCh
Confidence 4899999999999999999875 478899999987432 22355678999998883 57888
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+.+. .+...++||||+ +++|.+.+... ..++...+..++.|++.||.+||+. |++||||+|+||+++.
T Consensus 68 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nil~~~ 140 (290)
T cd05613 68 VTLHYAFQ----TDTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKL-GIIYRDIKLENILLDS 140 (290)
T ss_pred hceeeEee----cCCeEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEECC
Confidence 88888876 566789999999 67888887664 3488899999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEV 255 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~ 255 (393)
++ .++|+|||++...... .....++..|+|||.
T Consensus 141 ~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 177 (290)
T cd05613 141 NG-------------------------------------------HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDI 177 (290)
T ss_pred CC-------------------------------------------CEEEeeCccceecccccccccccccCCcccCChhh
Confidence 65 4999999988765332 123457889999999
Q ss_pred HhcC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 256 LIGA--GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 256 ~~~~--~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+... .++.++|+||||+++|+|++|..||........ .......+..
T Consensus 178 ~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~----------------------------- 226 (290)
T cd05613 178 VRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAEISRRILK----------------------------- 226 (290)
T ss_pred ccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHHHHHHhhc-----------------------------
Confidence 8763 467899999999999999999999964332110 0011111100
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPRR 390 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~~ 390 (393)
...+++...+..+.+++++||..||.+|| ++++++.||||....
T Consensus 227 -------------~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 227 -------------SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred -------------cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 00112234556788999999999999997 899999999998764
No 297
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.2e-36 Score=303.53 Aligned_cols=199 Identities=22% Similarity=0.376 Sum_probs=165.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+|++.++||+|+||.||+|.+..+++.||+|++..+. ...+++.+|+.+++.+ .|+|++++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L--------------~HPNIVkl 67 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL--------------IHPGIVPV 67 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC--------------CCcCcCeE
Confidence 47999999999999999999999999999999986432 2235677899999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD---------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~---------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
++.+. .++..+++|||+ +++|.+.+.... ...++...+..++.|++.||+|||++ |++||||||+
T Consensus 68 ~~v~~----d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~-GIIHRDLKPe 142 (932)
T PRK13184 68 YSICS----DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK-GVLHRDLKPD 142 (932)
T ss_pred EEEEe----eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC-CccccCCchh
Confidence 88776 567899999999 778887775321 12245667888999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------------
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------------- 240 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------------- 240 (393)
||+++.++ .++++|||++......
T Consensus 143 NILLd~dg-------------------------------------------~vKLiDFGLAk~i~~~~~~~~~l~~~~~~ 179 (932)
T PRK13184 143 NILLGLFG-------------------------------------------EVVILDWGAAIFKKLEEEDLLDIDVDERN 179 (932)
T ss_pred eEEEcCCC-------------------------------------------CEEEEecCcceeccccccccccccccccc
Confidence 99998776 4899999998754110
Q ss_pred --------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy12288 241 --------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288 (393)
Q Consensus 241 --------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~ 288 (393)
....+||+.|+|||.+.+..++.++|||||||++|+|++|..||....
T Consensus 180 s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~ 235 (932)
T PRK13184 180 ICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK 235 (932)
T ss_pred ccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcc
Confidence 112368999999999999989999999999999999999999997533
No 298
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=8.2e-36 Score=276.51 Aligned_cols=248 Identities=19% Similarity=0.234 Sum_probs=189.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc--eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT--FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|....++. .+++|.++.. ....+.+.+|+.++..+. .|+|++++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~-------------~hp~iv~~ 68 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG-------------HHPNIINL 68 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc-------------CCCchhhe
Confidence 479999999999999999999887765 4688877632 222356778999888873 58899999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
++.+. ....++++|||+ +++|.+++.... ...++...+..++.|++.||++||++ |++||
T Consensus 69 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~ 143 (297)
T cd05089 69 LGACE----NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK-QFIHR 143 (297)
T ss_pred EEEEc----cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccC
Confidence 98876 556789999998 678888875432 12477889999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC--CCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQ 246 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~ 246 (393)
||||+||+++.++ .++|+|||++........ ....
T Consensus 144 dlkp~Nill~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~ 180 (297)
T cd05089 144 DLAARNVLVGENL-------------------------------------------ASKIADFGLSRGEEVYVKKTMGRL 180 (297)
T ss_pred cCCcceEEECCCC-------------------------------------------eEEECCcCCCccccceeccCCCCc
Confidence 9999999998766 489999998864322211 1223
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
+..|+|||++.+..++.++|||||||++|+|++ |..||..... ......+.. +.
T Consensus 181 ~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~------~~~~~~~~~--~~----------------- 235 (297)
T cd05089 181 PVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC------AELYEKLPQ--GY----------------- 235 (297)
T ss_pred CccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHhc--CC-----------------
Confidence 557999999998889999999999999999997 9999965441 111111100 00
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+|+.+||..||.+|||++++++.
T Consensus 236 ----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 236 ----------------------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred ----------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001123355678899999999999999999999765
No 299
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.5e-36 Score=280.71 Aligned_cols=245 Identities=21% Similarity=0.298 Sum_probs=190.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCce----EEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTF----VALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|++.+.||+|+||.||+|.+..+++. ||+|.++... ...+.+.+|+.+++.+ .|+|++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~niv 72 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV--------------DNPHVC 72 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCCCCC
Confidence 5799999999999999999988766553 8999886432 2345677899999988 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. . ...+++++++ ++++.+.+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.+
T Consensus 73 ~~~g~~~----~-~~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~iiH~dlkp~Nill~~~ 145 (316)
T cd05108 73 RLLGICL----T-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER-RLVHRDLAARNVLVKTP 145 (316)
T ss_pred eEEEEEc----C-CCceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEecCC
Confidence 9998775 2 2367899998 788888886543 3478888999999999999999998 99999999999999776
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE~ 255 (393)
+ .++|+|||++........ ....+..|+|||.
T Consensus 146 ~-------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~ 182 (316)
T cd05108 146 Q-------------------------------------------HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALES 182 (316)
T ss_pred C-------------------------------------------cEEEccccccccccCCCcceeccCCccceeecChHH
Confidence 6 499999999886542211 1223567999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++||||||+++|+|++ |..||.+... ..+..+......
T Consensus 183 ~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~-------------------------- 229 (316)
T cd05108 183 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-------SEISSILEKGER-------------------------- 229 (316)
T ss_pred hccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHhCCCC--------------------------
Confidence 999889999999999999999997 9999965331 111111110000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+..++..+.+++.+||..||.+||++.+++.+
T Consensus 230 --------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 230 --------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred --------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 01112344578899999999999999999999886
No 300
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=6.6e-36 Score=277.91 Aligned_cols=247 Identities=20% Similarity=0.248 Sum_probs=189.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCce--EEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTF--VALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++.+.||+|+||.||+|.+..++.. +++|.++.. ......+.+|+.++..+. .|+|++++.
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~-------------~h~~iv~~~ 74 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-------------HHPNIINLL 74 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc-------------CCCCcceEE
Confidence 689999999999999999998877754 577766532 222345678999988883 688999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
+.+. .++.++++|||+ +++|.+++.... ...++...+..++.|++.|++|||++ |++|||
T Consensus 75 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~d 149 (303)
T cd05088 75 GACE----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRD 149 (303)
T ss_pred EEEC----CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC-Cccccc
Confidence 8876 566799999999 788888876432 12478889999999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCCCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQT 247 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~t 247 (393)
|||+||+++.++ .++|+|||++....... ....++
T Consensus 150 lkp~Nili~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~ 186 (303)
T cd05088 150 LAARNILVGENY-------------------------------------------VAKIADFGLSRGQEVYVKKTMGRLP 186 (303)
T ss_pred cchheEEecCCC-------------------------------------------cEEeCccccCcccchhhhcccCCCc
Confidence 999999998766 49999999886432211 112335
Q ss_pred CCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 248 RQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 248 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
..|+|||.+.+..++.++|||||||++|+|++ |..||..... .+....+ ....
T Consensus 187 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~~---~~~~----------------- 240 (303)
T cd05088 187 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKL---PQGY----------------- 240 (303)
T ss_pred ccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh------HHHHHHH---hcCC-----------------
Confidence 67999999988888999999999999999998 9999964431 1111110 0000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+.+...+..+.+++.+||..+|.+||++++++++
T Consensus 241 ---------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 ---------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ---------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000112345678899999999999999999999875
No 301
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.1e-35 Score=285.57 Aligned_cols=250 Identities=18% Similarity=0.244 Sum_probs=191.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|.+... ...||||++.... ...+.+.+|+.+++.+. .|+|
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~-------------~Hpn 102 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG-------------PHLN 102 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC-------------CCCC
Confidence 46889999999999999999987533 3469999986432 22456788999999982 4999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
|+++++.+. .....++||||+ +++|.+++....
T Consensus 103 Iv~l~~~~~----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (400)
T cd05105 103 IVNLLGACT----KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYM 178 (400)
T ss_pred eeeEEEEEc----cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccc
Confidence 999999886 566799999999 788887764321
Q ss_pred ----------------------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 137 ----------------------------------------------------YKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 137 ----------------------------------------------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
...++...+..++.|++.||+|||+. +
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ 257 (400)
T cd05105 179 DMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK-N 257 (400)
T ss_pred ccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-C
Confidence 12367778889999999999999998 9
Q ss_pred eeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----
Q psy12288 165 IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---- 240 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---- 240 (393)
++|+||||+||+++.++ .++|+|||++......
T Consensus 258 ivH~dikp~Nill~~~~-------------------------------------------~~kL~DfGla~~~~~~~~~~ 294 (400)
T cd05105 258 CVHRDLAARNVLLAQGK-------------------------------------------IVKICDFGLARDIMHDSNYV 294 (400)
T ss_pred eeCCCCChHhEEEeCCC-------------------------------------------EEEEEeCCcceecccccccc
Confidence 99999999999998765 4999999998754321
Q ss_pred -CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 241 -FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 241 -~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
.....++..|+|||.+.+..++.++|||||||++|+|++ |..||...... ..+...... +.
T Consensus 295 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~------~~~~~~~~~-~~---------- 357 (400)
T cd05105 295 SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD------STFYNKIKS-GY---------- 357 (400)
T ss_pred ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh------HHHHHHHhc-CC----------
Confidence 122345678999999998889999999999999999997 99999653211 111111000 00
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..||.+|||+.++.+.
T Consensus 358 -----------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 393 (400)
T cd05105 358 -----------------------------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDI 393 (400)
T ss_pred -----------------------------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHH
Confidence 001123455678899999999999999999988763
No 302
>KOG0983|consensus
Probab=100.00 E-value=3.5e-37 Score=263.94 Aligned_cols=271 Identities=20% Similarity=0.318 Sum_probs=205.5
Q ss_pred CCCCccccccCCee---CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCC
Q psy12288 13 RPGGYCPVQIGDLF---NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNV 87 (393)
Q Consensus 13 ~~~~~~~~~~~~~~---~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~ 87 (393)
.+.||-.+.-|+-. -++-+.+..||.|+.|.||+++.+.+|...|||.+..+.. ...++..++.++-.-
T Consensus 74 ~~tg~lti~~g~r~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s------ 147 (391)
T KOG0983|consen 74 KQTGYLTIGGGQRYQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS------ 147 (391)
T ss_pred CCceeEEecCCcccccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc------
Confidence 35555544433311 1244567899999999999999999999999999875432 233444455444332
Q ss_pred CcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
.++|.|++.+++|. .+..++|.||.|..-...++.+-. +++++..+-++..-+.+||.||.++.+|+|
T Consensus 148 -------~dcpyIV~c~GyFi----~n~dV~IcMelMs~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viH 215 (391)
T KOG0983|consen 148 -------HDCPYIVQCFGYFI----TNTDVFICMELMSTCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIH 215 (391)
T ss_pred -------cCCCeeeeeeeEEe----eCchHHHHHHHHHHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceee
Confidence 16899999999998 566688999999655555554433 458888888999999999999999889999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEI 245 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~ 245 (393)
||+||+|||+|+.++ +||||||.+-++..+ .....
T Consensus 216 RDvKPSNILlDe~Gn-------------------------------------------iKlCDFGIsGrlvdSkAhtrsA 252 (391)
T KOG0983|consen 216 RDVKPSNILLDERGN-------------------------------------------IKLCDFGISGRLVDSKAHTRSA 252 (391)
T ss_pred cccCccceEEccCCC-------------------------------------------EEeecccccceeeccccccccc
Confidence 999999999998774 999999999877554 34457
Q ss_pred CCCCCchhHHHhcC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc
Q psy12288 246 QTRQYRSVEVLIGA---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322 (393)
Q Consensus 246 ~t~~y~aPE~~~~~---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~ 322 (393)
|-+.|||||.+.-. .|.-.+||||||++++||+||.+||...+.. +..+-+++...|+-+
T Consensus 253 GC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--------Fe~ltkvln~ePP~L--------- 315 (391)
T KOG0983|consen 253 GCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--------FEVLTKVLNEEPPLL--------- 315 (391)
T ss_pred CCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--------HHHHHHHHhcCCCCC---------
Confidence 88999999998643 5788999999999999999999999876532 222223333322211
Q ss_pred ccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+....+++.|.+|+..||+.|+.+||.-.++|+|||++.
T Consensus 316 ---------------------------~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 316 ---------------------------PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred ---------------------------CcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 111236789999999999999999999999999999864
No 303
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.2e-35 Score=272.42 Aligned_cols=248 Identities=20% Similarity=0.325 Sum_probs=193.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|..... +..||+|.+.... .....+.+|+.+++.+ .|++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~ 70 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF--------------NCHH 70 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC--------------CCCc
Confidence 46899999999999999999987644 3789999986443 2234567888989888 8899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
++++++.+. .+...+++|||+ +++|.+.+.... ...+++..+..++.|++.||.|||+. +++|+||
T Consensus 71 i~~~~~~~~----~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~di 145 (277)
T cd05032 71 VVRLLGVVS----TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK-KFVHRDL 145 (277)
T ss_pred eeEEEEEEc----CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-Ccccccc
Confidence 999999887 557799999999 688888875432 12367788999999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEI 245 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~ 245 (393)
||+||+++.++ .++|+|||+++..... .....
T Consensus 146 ~p~nill~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~ 182 (277)
T cd05032 146 AARNCMVAEDL-------------------------------------------TVKIGDFGMTRDIYETDYYRKGGKGL 182 (277)
T ss_pred ChheEEEcCCC-------------------------------------------CEEECCcccchhhccCcccccCCCCC
Confidence 99999998776 4999999988754322 22334
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
++..|+|||.+.+..++.++|||||||++|++++ |..||...+. ......+. .+.
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------~~~~~~~~--~~~---------------- 238 (277)
T cd05032 183 LPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN------EEVLKFVI--DGG---------------- 238 (277)
T ss_pred ccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH------HHHHHHHh--cCC----------------
Confidence 5788999999988888999999999999999998 9999965441 11111111 010
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||+.+|.+|||+.++++.
T Consensus 239 -----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 239 -----------------------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred -----------------------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 011223456788999999999999999999999864
No 304
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.7e-35 Score=268.36 Aligned_cols=241 Identities=22% Similarity=0.346 Sum_probs=194.4
Q ss_pred EEecccCceEEEEEEeCCC---CceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+.||+|+||.||+|..... +..|++|.+...... ...+.+|+..++.+ .|++++++++.+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~~~~ 66 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL--------------GHPNVVRLLGVCT 66 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc--------------CCCChheeeeeec
Confidence 4689999999999999866 889999998765433 46778899999998 7899999988887
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSD-------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
.+..++++|||+ +++|.+.+.... ...+++..+..++.|++.||++||++ +++|+||+|+||+++.+
T Consensus 67 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~nili~~~ 141 (262)
T cd00192 67 ----EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGED 141 (262)
T ss_pred ----CCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC-CcccCccCcceEEECCC
Confidence 467799999999 889998887642 24589999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~ 255 (393)
+ .++|+|||.+...... .....++..|+|||.
T Consensus 142 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 178 (262)
T cd00192 142 L-------------------------------------------VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPES 178 (262)
T ss_pred C-------------------------------------------cEEEcccccccccccccccccccCCCcCccccCHHH
Confidence 6 4999999998866432 233456788999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+....++.++|+||||+++|+|++ |..||.... .......+.. +
T Consensus 179 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~--~--------------------------- 223 (262)
T cd00192 179 LKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS------NEEVLEYLRK--G--------------------------- 223 (262)
T ss_pred hccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc--C---------------------------
Confidence 998889999999999999999999 699997543 1111111111 0
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+...+..+.+++.+||..||.+|||+.|++++
T Consensus 224 ------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 224 ------------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred ------------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0111234456789999999999999999999999876
No 305
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.8e-35 Score=268.76 Aligned_cols=246 Identities=19% Similarity=0.289 Sum_probs=192.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.++||+|+||.||+|... .+..+++|.+.........+.+|+.+++.+ .|++++++.+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 68 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL--------------QHDKLVKLHA 68 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhc--------------CCCCcceEEE
Confidence 4578999999999999999999754 456699998876554456788899999998 7888888877
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. . ...+++|||+ ++++.+++.......++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 69 ~~~----~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~ni~i~~~~--- 139 (260)
T cd05073 69 VVT----K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASL--- 139 (260)
T ss_pred EEc----C-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCC---
Confidence 765 2 4588999999 67998888765445578888999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||.+....... ....++..|+|||.+....
T Consensus 140 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~ 179 (260)
T cd05073 140 ----------------------------------------VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 179 (260)
T ss_pred ----------------------------------------cEEECCCcceeeccCCCcccccCCcccccccCHhHhccCC
Confidence 49999999887553221 1223456799999998888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|++++ |..||...+. ......+ .+..+
T Consensus 180 ~~~~~Di~slG~~l~~l~t~g~~p~~~~~~------~~~~~~~---~~~~~----------------------------- 221 (260)
T cd05073 180 FTIKSDVWSFGILLMEIVTYGRIPYPGMSN------PEVIRAL---ERGYR----------------------------- 221 (260)
T ss_pred cCccccchHHHHHHHHHHhcCCCCCCCCCH------HHHHHHH---hCCCC-----------------------------
Confidence 8999999999999999998 9999975431 1111111 00000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.+...+..+.+++.+||..+|++||++.++++
T Consensus 222 ---------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 222 ---------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred ---------CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0111344567889999999999999999998864
No 306
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.5e-35 Score=265.78 Aligned_cols=249 Identities=31% Similarity=0.474 Sum_probs=199.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.++||+|++|.||++.+..+++.+++|.+.... .....+.+|+.+++.+ .|+|++++.+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV--------------NHPNIISYKE 66 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC--------------CCCCchhhhh
Confidence 5899999999999999999999999999999887532 2234556788888888 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+. .+...++||||+ +++|...+.... ...++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~-~i~h~~l~~~ni~~~~~~- 140 (256)
T cd08530 67 AFL----DGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVAND- 140 (256)
T ss_pred hhc----cCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEEecCC-
Confidence 887 567899999999 778887775521 23478889999999999999999998 999999999999998765
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|++||.+.+..+
T Consensus 141 ------------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~ 178 (256)
T cd08530 141 ------------------------------------------LVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPY 178 (256)
T ss_pred ------------------------------------------cEEEeeccchhhhccCCcccccCCccccCHHHHCCCCC
Confidence 4999999988765433 223457889999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|+.||...+.. .....+. .+..
T Consensus 179 ~~~~D~~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~--~~~~-------------------------------- 218 (256)
T cd08530 179 SYKSDIWSLGCLLYEMATFAPPFEARSMQ------DLRYKVQ--RGKY-------------------------------- 218 (256)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHh--cCCC--------------------------------
Confidence 99999999999999999999999654311 1111110 0110
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...+...+..+.+++.+||..+|.+|||+.++++||++
T Consensus 219 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 219 -------PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -------CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 01223456778999999999999999999999999985
No 307
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.3e-35 Score=270.71 Aligned_cols=246 Identities=16% Similarity=0.257 Sum_probs=192.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCC---CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++|++.+.||+|+||.||+|....+ ...||+|.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 69 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF--------------DHPNIIR 69 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC--------------CCCCcce
Confidence 4799999999999999999988654 4579999876432 2234567899999988 7899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. .+...+++||++ +++|.+++.... ..++...+..++.|++.|+++||++ +++|+||||+||+++.++
T Consensus 70 ~~~~~~----~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~di~p~nili~~~~ 143 (266)
T cd05033 70 LEGVVT----KSRPVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM-NYVHRDLAARNILVNSNL 143 (266)
T ss_pred EeEEEe----cCCceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCC
Confidence 988876 566789999999 678888776543 3588999999999999999999998 999999999999998766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchhHHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSVEVL 256 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aPE~~ 256 (393)
.++|+|||++....... ....++..|+|||.+
T Consensus 144 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~ 180 (266)
T cd05033 144 -------------------------------------------VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAI 180 (266)
T ss_pred -------------------------------------------CEEECccchhhcccccccceeccCCCCCccccChhhh
Confidence 49999999988664211 112345789999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+..++.++|+||||+++|+|++ |..||..... ......+.. +.
T Consensus 181 ~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~------~~~~~~~~~--~~--------------------------- 225 (266)
T cd05033 181 AYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN------QDVIKAVED--GY--------------------------- 225 (266)
T ss_pred ccCCCccccchHHHHHHHHHHHccCCCCCCCCCH------HHHHHHHHc--CC---------------------------
Confidence 98889999999999999999998 9999864331 111111110 00
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+.+...+..+.+++.+||..+|.+||++.+++++
T Consensus 226 ------------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 226 ------------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 001123445678899999999999999999999875
No 308
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.6e-36 Score=271.61 Aligned_cols=243 Identities=22% Similarity=0.360 Sum_probs=187.2
Q ss_pred EEEEEecccCceEEEEEEeC----CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 31 HVIRKLGWGHFSTVWLSWDL----QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 31 ~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.+.+.||.|+||.||+|... ..+..|+||.++.... ..+.+.+|+..++.+ .|+|+++++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ni~~~~ 67 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL--------------RHPNIVKLY 67 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH--------------SBTTBE-EE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc--------------ccccccccc
Confidence 46789999999999999888 3456799999965322 357788999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .....++||||+ +++|.+++.......++...+..++.|++.||+|||++ +++|++|+++||+++.++
T Consensus 68 g~~~----~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-~iiH~~l~~~nill~~~~-- 140 (259)
T PF07714_consen 68 GFCI----ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-NIIHGNLSPSNILLDSNG-- 140 (259)
T ss_dssp EEEE----SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEEETTT--
T ss_pred cccc----ccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccc--
Confidence 9888 445599999999 68999998887445689999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||++...... .........|+|||.+..
T Consensus 141 -----------------------------------------~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 179 (259)
T PF07714_consen 141 -----------------------------------------QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKD 179 (259)
T ss_dssp -----------------------------------------EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHH
T ss_pred -----------------------------------------ccccccccccccccccccccccccccccccccccccccc
Confidence 5999999998765211 223345678999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..++.++||||||+++||+++ |+.||...+ .......+.+ +
T Consensus 180 ~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~------~~~~~~~~~~--~------------------------------ 221 (259)
T PF07714_consen 180 GEYTKKSDVYSFGMLLYEILTLGKFPFSDYD------NEEIIEKLKQ--G------------------------------ 221 (259)
T ss_dssp SEESHHHHHHHHHHHHHHHHTTSSGTTTTSC------HHHHHHHHHT--T------------------------------
T ss_pred ccccccccccccccccccccccccccccccc------cccccccccc--c------------------------------
Confidence 889999999999999999999 788886443 2222111110 0
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.....+...+..+.++|.+||..||.+|||++++++
T Consensus 222 ---------~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 222 ---------QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp ---------EETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ---------ccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 011123456678899999999999999999999975
No 309
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.4e-35 Score=273.55 Aligned_cols=255 Identities=25% Similarity=0.370 Sum_probs=195.9
Q ss_pred eEEEEEEecccCceEEEEEEeC---CCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+|++.+.||+|++|.||+|... .+++.||+|.++... ...+.+.+|+.++..+. .|+++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~-------------~~~~i 67 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-------------RCPFL 67 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc-------------CCcch
Confidence 4889999999999999999864 457889999887432 22345678888888883 58889
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+.+. .+...++||||+ +++|...+... ..+++..++.++.|++.||.+||+. +++|+||+|+||+++.
T Consensus 68 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~-~~~H~dl~p~nil~~~ 140 (288)
T cd05583 68 VTLHYAFQ----TDTKLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQL-GIIYRDIKLENILLDS 140 (288)
T ss_pred hhhheeee----cCCEEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECC
Confidence 99988876 567799999999 67888887654 3488999999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEV 255 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~ 255 (393)
++ .++|+|||++....... ....++..|++||.
T Consensus 141 ~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 177 (288)
T cd05583 141 EG-------------------------------------------HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEV 177 (288)
T ss_pred CC-------------------------------------------CEEEEECccccccccccccccccccCCccccCHHH
Confidence 65 49999999887543221 12357889999999
Q ss_pred HhcCC--CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 256 LIGAG--YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 256 ~~~~~--~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+.+.. .+.++|+||||+++|+|++|..||........ .......+...
T Consensus 178 ~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~---------------------------- 227 (288)
T cd05583 178 IRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS--QSEISRRILKS---------------------------- 227 (288)
T ss_pred hcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch--HHHHHHHHHcc----------------------------
Confidence 87764 68899999999999999999999964332110 01111111110
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC---HHHHhcCCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS---AADCLRHPWLNPRR 390 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~ell~hp~~~~~~ 390 (393)
....+...+..+.++|.+||+.||++||| +.++++||||+++.
T Consensus 228 --------------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 228 --------------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred --------------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 01122334567889999999999999998 57789999998863
No 310
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7.8e-36 Score=269.80 Aligned_cols=239 Identities=18% Similarity=0.300 Sum_probs=186.0
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
+.||+|+||.||+|.+..+++.+|+|.+... ......+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~~--- 63 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY--------------SHPNIVRLIGVCT--- 63 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC--------------CCCCcceEEEEEc---
Confidence 3689999999999999999999999987643 22245678899999998 8999999998876
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.....++||||+ +++|.+.+.... ..+++..+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~--------- 131 (252)
T cd05084 64 -QKQPIYIVMELVQGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKN--------- 131 (252)
T ss_pred -CCCCeEEEEeeccCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEEcCCC---------
Confidence 556789999999 678887775432 4588999999999999999999998 999999999999997665
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhHHHhcCCCCchh
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++........ ....+..|+|||.+.+..++.++
T Consensus 132 ----------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 177 (252)
T cd05084 132 ----------------------------------VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSES 177 (252)
T ss_pred ----------------------------------cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHH
Confidence 499999999875432211 11224569999999888899999
Q ss_pred hHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 266 DIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 266 DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
|+||||+++|+|++ |..||...+. ......+.. +
T Consensus 178 Dv~slG~il~e~~~~~~~p~~~~~~------~~~~~~~~~--~------------------------------------- 212 (252)
T cd05084 178 DVWSFGILLWEAFSLGAVPYANLSN------QQTREAIEQ--G------------------------------------- 212 (252)
T ss_pred HHHHHHHHHHHHHhCCCCCccccCH------HHHHHHHHc--C-------------------------------------
Confidence 99999999999998 8888854331 111111100 0
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.....+...+..+.+++.+||..||.+|||+.++++
T Consensus 213 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 213 --VRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred --CCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 001122344668889999999999999999999875
No 311
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.3e-35 Score=274.47 Aligned_cols=249 Identities=20% Similarity=0.287 Sum_probs=192.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCC-----ceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDK-----TFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||++.+.... ..+|+|.+..... ....+.+|+.+++.+. .|+|
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~~ 77 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-------------KHKN 77 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc-------------CCCC
Confidence 368999999999999999999876543 6799998875322 2245678888888872 5889
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--------------DYKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--------------~~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
++++++.+. .+..++++|||+ +++|..++... ....++...+..++.|++.||+|||+. +
T Consensus 78 i~~~~~~~~----~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ 152 (293)
T cd05053 78 IINLLGVCT----QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK-K 152 (293)
T ss_pred eeeEEEEEc----CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC-C
Confidence 999988776 566799999998 77888887542 234578889999999999999999998 9
Q ss_pred eeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----
Q psy12288 165 IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---- 240 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---- 240 (393)
++|+||||+||+++.++ .++|+|||++......
T Consensus 153 ivH~dlkp~Nil~~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~~~~ 189 (293)
T cd05053 153 CIHRDLAARNVLVTEDH-------------------------------------------VMKIADFGLARDIHHIDYYR 189 (293)
T ss_pred ccccccceeeEEEcCCC-------------------------------------------eEEeCcccccccccccccee
Confidence 99999999999998766 5999999998765322
Q ss_pred -CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 241 -FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 241 -~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
.....++..|+|||++.+..++.++|||||||++|++++ |..||...+. ......+.. +.
T Consensus 190 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~---------- 251 (293)
T cd05053 190 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------EELFKLLKE--GY---------- 251 (293)
T ss_pred ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH------HHHHHHHHc--CC----------
Confidence 122234567999999988889999999999999999997 9999865431 111111100 00
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+|+.+||..||.+|||+.|++++
T Consensus 252 -----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 252 -----------------------------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred -----------------------------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 001223445678899999999999999999999875
No 312
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.4e-35 Score=272.61 Aligned_cols=247 Identities=21% Similarity=0.324 Sum_probs=191.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|.+.+.||+|+||.||+|.... ++..+++|.+..... ..+.+.+|+.+++.+ .|+|++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~ 70 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL--------------QHEHIV 70 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC--------------CCCCcc
Confidence 469999999999999999997543 455689998865432 235678899999998 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
++.+.+. .+...++||||+ +++|.+++.... ...+++..+..++.|++.|+++||++ |++
T Consensus 71 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~ 145 (291)
T cd05094 71 KFYGVCG----DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFV 145 (291)
T ss_pred eEEEEEc----cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-Cee
Confidence 9998876 566799999999 788888876432 12378889999999999999999998 999
Q ss_pred eccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----C
Q psy12288 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----F 241 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~ 241 (393)
||||||+||+++.++ .++|+|||++...... .
T Consensus 146 H~dlkp~Nil~~~~~-------------------------------------------~~~l~dfg~a~~~~~~~~~~~~ 182 (291)
T cd05094 146 HRDLATRNCLVGANL-------------------------------------------LVKIGDFGMSRDVYSTDYYRVG 182 (291)
T ss_pred ecccCcceEEEccCC-------------------------------------------cEEECCCCcccccCCCceeecC
Confidence 999999999998766 4999999998754321 1
Q ss_pred CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc
Q psy12288 242 ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320 (393)
Q Consensus 242 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 320 (393)
....++..|+|||.+.+..++.++||||||+++|+|++ |..||...+. ......+. .+..+
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------~~~~~~~~--~~~~~---------- 244 (291)
T cd05094 183 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN------TEVIECIT--QGRVL---------- 244 (291)
T ss_pred CCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHh--CCCCC----------
Confidence 23345778999999998889999999999999999998 9999865441 11111110 00000
Q ss_pred ccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+...+..+.+++.+||..||.+|||++++++.
T Consensus 245 -----------------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 245 -----------------------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred -----------------------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 0112345678899999999999999999998753
No 313
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.6e-35 Score=268.07 Aligned_cols=243 Identities=19% Similarity=0.269 Sum_probs=191.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||++. .+++.||+|.+.... ..+.+.+|+.+++.+ .|+|++++.+.+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~--------------~~~~i~~~~~~~ 68 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-TAQAFLEETAVMTKL--------------HHKNLVRLLGVI 68 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-hHHHHHHHHHHHHhC--------------CCCCcCeEEEEE
Confidence 479999999999999999985 467889999886542 346778899999988 789999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. . ...+++|||+ +++|.+.+.......++...+..++.|++.||++||+. |++||||||+||+++.++
T Consensus 69 ~----~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~H~dl~p~nili~~~~----- 137 (254)
T cd05083 69 L----H-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDG----- 137 (254)
T ss_pred c----C-CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCC-----
Confidence 5 2 2368999999 68998888765544588999999999999999999998 999999999999997766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhh
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAAD 266 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D 266 (393)
.++|+|||.+............+..|+|||.+.+..++.++|
T Consensus 138 --------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~D 179 (254)
T cd05083 138 --------------------------------------VAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSD 179 (254)
T ss_pred --------------------------------------cEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhh
Confidence 499999999875443333334467899999998888999999
Q ss_pred HHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 267 IWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 267 iwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
+||||+++|+|++ |+.||...+.. .....+.. +..
T Consensus 180 v~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~--~~~------------------------------------ 215 (254)
T cd05083 180 VWSYGVLLWEVFSYGRAPYPKMSLK------EVKECVEK--GYR------------------------------------ 215 (254)
T ss_pred HHHHHHHHHHHHhCCCCCCccCCHH------HHHHHHhC--CCC------------------------------------
Confidence 9999999999998 99999754411 11111100 000
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++++||..+|.+||+++++++.
T Consensus 216 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 216 ---MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred ---CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00123445678899999999999999999998864
No 314
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.1e-35 Score=271.18 Aligned_cols=246 Identities=21% Similarity=0.304 Sum_probs=188.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++|++.++||+|+||.||+|.+..++. .||+|+++... .....+.+|..+++.+ .|+|+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i 71 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV--------------GSPYV 71 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc--------------CCCCC
Confidence 4689999999999999999998877765 48999886432 2234567788888877 78899
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. . ...+++++++ ++++.+.+.... ..++...+..++.|++.||+|||++ +++||||||+||+++.
T Consensus 72 ~~~~~~~~----~-~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~iiH~dlkp~Nil~~~ 144 (279)
T cd05109 72 CRLLGICL----T-STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV-RLVHRDLAARNVLVKS 144 (279)
T ss_pred ceEEEEEc----C-CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcC
Confidence 88888775 2 3467899998 788888876532 3588999999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVE 254 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE 254 (393)
++ .++|+|||+++....... ...++..|++||
T Consensus 145 ~~-------------------------------------------~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE 181 (279)
T cd05109 145 PN-------------------------------------------HVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 181 (279)
T ss_pred CC-------------------------------------------cEEECCCCceeecccccceeecCCCccchhhCCHH
Confidence 65 499999999876542211 123456799999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+.+..++.++|||||||++|+|++ |..||.... ...+..........
T Consensus 182 ~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-------~~~~~~~~~~~~~~------------------------ 230 (279)
T cd05109 182 SILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP-------AREIPDLLEKGERL------------------------ 230 (279)
T ss_pred HhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHHHHCCCcC------------------------
Confidence 9998889999999999999999998 899986433 11111111110000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.+...+..+.+++.+||..||++||++.++++.
T Consensus 231 ----------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 231 ----------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred ----------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0112345678899999999999999999999854
No 315
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.5e-35 Score=272.36 Aligned_cols=246 Identities=21% Similarity=0.303 Sum_probs=190.1
Q ss_pred CeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|++.++||+|+||.||+|... .++..+++|.+... ....+.+.+|+.+++.+ .|+|++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~ 70 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL--------------QHQHIV 70 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcC--------------CCCCCc
Confidence 57889999999999999999743 34667999987643 23346688899999998 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-------------KGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-------------~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
++.+.+. .+...+++|||+ +++|.+++..... ..+++..+..++.|++.|++|||+. |++|
T Consensus 71 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-~i~H 145 (280)
T cd05092 71 RFYGVCT----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVH 145 (280)
T ss_pred eEEEEEe----cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC-Ceec
Confidence 9988776 556789999999 7788888765321 2478889999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FA 242 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~ 242 (393)
+||||+||+++.++ .++|+|||++...... ..
T Consensus 146 ~dlkp~nil~~~~~-------------------------------------------~~kL~dfg~~~~~~~~~~~~~~~ 182 (280)
T cd05092 146 RDLATRNCLVGQGL-------------------------------------------VVKIGDFGMSRDIYSTDYYRVGG 182 (280)
T ss_pred ccccHhhEEEcCCC-------------------------------------------CEEECCCCceeEcCCCceeecCC
Confidence 99999999997665 4999999988654321 11
Q ss_pred CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
...+++.|+|||.+.+..++.++|||||||++|+|++ |.+||..... ...+..+.. +.
T Consensus 183 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~------------- 241 (280)
T cd05092 183 RTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN------TEAIECITQ--GR------------- 241 (280)
T ss_pred CccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH------HHHHHHHHc--Cc-------------
Confidence 2234678999999998889999999999999999998 9999965441 111111110 00
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.++|.+||+.||.+||++.++++
T Consensus 242 --------------------------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 242 --------------------------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred --------------------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00112334567889999999999999999999875
No 316
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=9.1e-36 Score=267.10 Aligned_cols=228 Identities=20% Similarity=0.259 Sum_probs=181.3
Q ss_pred cCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEEE
Q psy12288 39 GHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHIC 118 (393)
Q Consensus 39 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 118 (393)
|.+|.||+|++..+++.+|+|.+.... ...+|...+... .|+|++++++.+. .....+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~--------------~~~~i~~~~~~~~----~~~~~~ 61 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPH--------------CVPNMVCLHKYIV----SEDSVF 61 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhc--------------CCCceeehhhhee----cCCeEE
Confidence 889999999999999999999987542 223343333333 6899999999887 567899
Q ss_pred EEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhccccc
Q psy12288 119 MVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197 (393)
Q Consensus 119 iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~ 197 (393)
++|||+ +++|.+.+.... .+++..+..++.|++.||.|||+. |++|+||||+||+++.++
T Consensus 62 lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nil~~~~~---------------- 122 (237)
T cd05576 62 LVLQHAEGGKLWSHISKFL--NIPEECVKRWAAEMVVALDALHRE-GIVCRDLNPNNILLDDRG---------------- 122 (237)
T ss_pred EEEecCCCCCHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCC----------------
Confidence 999999 678888876643 488999999999999999999998 999999999999998766
Q ss_pred CCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHH
Q psy12288 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277 (393)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~el 277 (393)
.++++|||.+...........++..|+|||.+.+..++.++|+||+|+++|+|
T Consensus 123 ---------------------------~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el 175 (237)
T cd05576 123 ---------------------------HIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFEL 175 (237)
T ss_pred ---------------------------CEEEecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHH
Confidence 48999999876655544455567889999999888889999999999999999
Q ss_pred HhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHH
Q psy12288 278 ATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEAS 357 (393)
Q Consensus 278 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (393)
++|+.||...... ... .....++...+.
T Consensus 176 ~~g~~~~~~~~~~----------------------~~~------------------------------~~~~~~~~~~~~ 203 (237)
T cd05576 176 LTGKTLVECHPSG----------------------INT------------------------------HTTLNIPEWVSE 203 (237)
T ss_pred HHCcchhhcCchh----------------------ccc------------------------------ccccCCcccCCH
Confidence 9999877422100 000 000012234556
Q ss_pred HHHHHHHhccccCCCCCcCH-----HHHhcCCCC
Q psy12288 358 DFADFLLPMLHVNQKLRASA-----ADCLRHPWL 386 (393)
Q Consensus 358 ~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~ 386 (393)
.+.++|++||+.||.+||++ +++++||||
T Consensus 204 ~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 204 EARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 78899999999999999996 999999998
No 317
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-35 Score=274.85 Aligned_cols=249 Identities=21% Similarity=0.292 Sum_probs=190.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-------CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-------KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
.++|.+.+.||+|+||.||+|.+... ...+|+|.+.... .....+.+|+.+++.+. .|
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-------------~h 83 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-------------KH 83 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc-------------CC
Confidence 46899999999999999999986542 3469999887532 22345677888888873 58
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY--------------KGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
++++++++.+. .+...++||||+ +++|.+++..... ..++..+++.++.|++.||+|||++
T Consensus 84 ~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 159 (307)
T cd05098 84 KNIINLLGACT----QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK 159 (307)
T ss_pred CCEeeEEEEEe----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 89999998886 556789999999 6789888865321 2377889999999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
|++|+||||+||+++.++ .++|+|||++......
T Consensus 160 -gi~H~dlkp~Nill~~~~-------------------------------------------~~kL~dfg~a~~~~~~~~ 195 (307)
T cd05098 160 -KCIHRDLAARNVLVTEDN-------------------------------------------VMKIADFGLARDIHHIDY 195 (307)
T ss_pred -CcccccccHHheEEcCCC-------------------------------------------cEEECCCcccccccccch
Confidence 999999999999998766 4999999998754321
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.... .......+ .. +.
T Consensus 196 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~------~~~~~~~~-~~-~~-------- 259 (307)
T cd05098 196 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLL-KE-GH-------- 259 (307)
T ss_pred hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHH-Hc-CC--------
Confidence 112233568999999998889999999999999999998 888885433 11111111 00 00
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+|||+.+++++
T Consensus 260 -------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 260 -------------------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred -------------------------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 001223455788899999999999999999999875
No 318
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.8e-35 Score=272.26 Aligned_cols=260 Identities=23% Similarity=0.286 Sum_probs=191.2
Q ss_pred CCeE-EEEEEecccCceEEEEEE----eCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRY-HVIRKLGWGHFSTVWLSW----DLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y-~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++| ++.+.||+|+||.||++. ...++..||+|.+..... ....+.+|+.+++.+ .|+|
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~ 67 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL--------------YHEN 67 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC--------------CCCC
Confidence 3456 999999999999998864 334677899999875422 345677899999998 8899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
++++.+.+.. ......+++|||+ +++|.+.+... .+++..+..++.|++.||.|||++ +++|+||||+||+++
T Consensus 68 i~~~~~~~~~--~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~-~i~H~dlkp~Nili~ 141 (283)
T cd05080 68 IVKYKGCCSE--QGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLD 141 (283)
T ss_pred EeeEEEEEec--CCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC-CeeccccChheEEEc
Confidence 9999887652 2345689999999 67887777653 389999999999999999999998 999999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCch
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRS 252 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~a 252 (393)
.++ .++|+|||++....... ....++..|+|
T Consensus 142 ~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (283)
T cd05080 142 NDR-------------------------------------------LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 178 (283)
T ss_pred CCC-------------------------------------------cEEEeecccccccCCcchhhccCCCCCCCceeeC
Confidence 765 49999999987653221 12234667999
Q ss_pred hHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCee
Q psy12288 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 253 PE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
||.+.+..++.++||||||+++|+|++|..||....... ..... ..+..........
T Consensus 179 PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-------------- 236 (283)
T cd05080 179 VECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF--------EEMIGPKQGQMTVVRLIEL-------------- 236 (283)
T ss_pred HhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh--------hhhhcccccccchhhhhhh--------------
Confidence 999988888999999999999999999999985432110 00000 0000000000000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.......+.+...+..+.+++.+||..||++|||++++++
T Consensus 237 -----------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 237 -----------LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred -----------hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0000011123445678999999999999999999999985
No 319
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=4.1e-35 Score=264.50 Aligned_cols=239 Identities=25% Similarity=0.429 Sum_probs=195.8
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||++.+..+++.+++|.+..... ....+..|+.+++.+ .|++++++++.+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~~--- 63 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI--------------NHPFIVKLHYAFQ--- 63 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc--------------CCCcHHHHHHHee---
Confidence 6999999999999998899999999875432 234678899999998 7899999998887
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.+...+++||++ +++|.+.+.... .+++..+..++.|++.|+.+||+. +++|+||+|+||+++.++
T Consensus 64 -~~~~~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~-~~~H~~l~p~ni~~~~~~--------- 130 (250)
T cd05123 64 -TEEKLYLVLEYAPGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLDADG--------- 130 (250)
T ss_pred -cCCeeEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEcCCC---------
Confidence 677899999999 889888886653 488999999999999999999997 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCchhhH
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGPAADI 267 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di 267 (393)
.++|+|||.+...... .....++..|++||...+...+.++|+
T Consensus 131 ----------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~ 176 (250)
T cd05123 131 ----------------------------------HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDW 176 (250)
T ss_pred ----------------------------------cEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhH
Confidence 4999999988765432 334567889999999988888999999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
||||+++|++++|..||..... ......+.. .
T Consensus 177 ~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~------------------------------------------~ 208 (250)
T cd05123 177 WSLGVLLYEMLTGKPPFYAEDR------KEIYEKILK------------------------------------------D 208 (250)
T ss_pred HHHHHHHHHHHHCCCCCCCCCH------HHHHHHHhc------------------------------------------C
Confidence 9999999999999999964331 111111111 1
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCcCH---HHHhcCCCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRASA---ADCLRHPWL 386 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~ell~hp~~ 386 (393)
...++...+..+.++|++||..||.+||++ +++++||||
T Consensus 209 ~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 209 PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 122334446788899999999999999999 999999998
No 320
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.3e-35 Score=269.63 Aligned_cols=249 Identities=19% Similarity=0.228 Sum_probs=189.0
Q ss_pred EEEEEEecccCceEEEEEEeCCC---CceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
|++.+.||+|+||.||.|....+ +..||+|.++.... ....+.+|+..++.+ .|+|++++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~ 66 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF--------------DHPNVMKL 66 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC--------------CCCCeeeE
Confidence 57889999999999999987654 47899999875422 234677899999988 88999998
Q ss_pred cccceeecC--CCeEEEEEEeec-cccHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 104 LNDFKIYSR--NGTHICMVFEVM-GYNLLRLIARS----DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 104 ~~~~~~~~~--~~~~~~iv~e~~-~~~l~~~~~~~----~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
++.+..... .....+++|||+ +++|...+... ....+++..+..++.|++.||+|||++ +++|+||||+||+
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~-~i~H~dlkp~Nil 145 (273)
T cd05035 67 IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCM 145 (273)
T ss_pred EeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchheEE
Confidence 887653221 223589999999 67887776432 123478899999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCc
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYR 251 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~ 251 (393)
++.++ .++|+|||+++....... ....+..|+
T Consensus 146 ~~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 182 (273)
T cd05035 146 LREDM-------------------------------------------TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 182 (273)
T ss_pred ECCCC-------------------------------------------eEEECCccceeeccccccccccccccCCcccc
Confidence 97765 499999999876532211 122356799
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
|||.+.+..++.++|||||||++|+|++ |..||.+... ...+..+.. +.
T Consensus 183 ~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~---------------------- 232 (273)
T cd05035 183 AIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN------HEIYDYLRH--GN---------------------- 232 (273)
T ss_pred CHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHc--CC----------------------
Confidence 9999988889999999999999999999 8899965441 111111110 00
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..||.+|||+.|++++
T Consensus 233 -----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 233 -----------------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred -----------------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001123456688999999999999999999999875
No 321
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=3.3e-35 Score=299.26 Aligned_cols=133 Identities=23% Similarity=0.391 Sum_probs=114.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||+|++..+++.||||+++.... ....+..|+.+++.+ .|++++++
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~Iv~~ 69 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS--------------KSPFIVHL 69 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc--------------CCCCcCeE
Confidence 479999999999999999999999999999999875322 235567888888887 78999998
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+..+. ...++++||||+ +++|.+++... ..+++..++.++.||+.||.|||.. +|+||||||+|||++.++
T Consensus 70 ~~~~~----~~~~~~lVmEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g 141 (669)
T cd05610 70 YYSLQ----SANNVYLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRH-GIIHRDLKPDNMLISNEG 141 (669)
T ss_pred EEEEE----ECCEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCccHHHEEEcCCC
Confidence 87776 567899999999 78888887654 3478899999999999999999998 999999999999997664
No 322
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.8e-35 Score=270.37 Aligned_cols=248 Identities=19% Similarity=0.218 Sum_probs=186.9
Q ss_pred EEEEEecccCceEEEEEEeCCCCc--eEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 31 HVIRKLGWGHFSTVWLSWDLQDKT--FVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+.++||+|+||.||+|....++. .+|+|.++.. ....+.+.+|+.+++.+ .|+|++++++
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 67 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF--------------DHPNVMRLIG 67 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC--------------CCCCcceEEE
Confidence 467899999999999999877765 5899987643 22345677899999998 8899999887
Q ss_pred cceeecC--CCeEEEEEEeec-cccHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 106 DFKIYSR--NGTHICMVFEVM-GYNLLRLIARS----DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 106 ~~~~~~~--~~~~~~iv~e~~-~~~l~~~~~~~----~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
.+..... .....+++|||+ ++++.+.+... ....++...+..++.|++.||+|||++ +++||||||+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~ 146 (272)
T cd05075 68 VCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLN 146 (272)
T ss_pred EEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhheEEc
Confidence 6542221 223578999999 67887776432 123478899999999999999999998 999999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchh
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSV 253 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aP 253 (393)
.++ .++|+|||++....... ....+++.|++|
T Consensus 147 ~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~p 183 (272)
T cd05075 147 ENM-------------------------------------------NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183 (272)
T ss_pred CCC-------------------------------------------CEEECCCCcccccCcccceecCCcccCCcccCCH
Confidence 665 49999999987653221 122356789999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|...+..++.++|+||||+++|+|++ |+.||..... ......+.. +..
T Consensus 184 e~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~~----------------------- 232 (272)
T cd05075 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN------SEIYDYLRQ--GNR----------------------- 232 (272)
T ss_pred HHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHc--CCC-----------------------
Confidence 99998889999999999999999999 8899965331 111111100 000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||+.||.+|||+.+++++
T Consensus 233 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 233 ----------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 01123345678899999999999999999999875
No 323
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.4e-35 Score=274.62 Aligned_cols=254 Identities=19% Similarity=0.298 Sum_probs=189.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCC--------------ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDK--------------TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSS 90 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--------------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~ 90 (393)
.++|++.++||+|+||.||+|++..++ ..||+|.+.... .....+.+|+++++.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l--------- 74 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL--------- 74 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC---------
Confidence 358999999999999999999875432 358999887532 2234578899999998
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC----------CCCCCHHHHHHHHHHHHHHHHHh
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD----------YKGIHIQNVRTIIKQVLEGLNYL 159 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------~~~l~~~~~~~i~~ql~~~l~~l 159 (393)
.|++++++++.+. .....++||||+ +++|.+++.... ...++...+..++.|++.||+||
T Consensus 75 -----~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l 145 (295)
T cd05097 75 -----KNPNIIRLLGVCV----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL 145 (295)
T ss_pred -----CCCCcCeEEEEEc----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHH
Confidence 7899999999886 566789999999 778888775432 12367788899999999999999
Q ss_pred hhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC
Q psy12288 160 HTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD 239 (393)
Q Consensus 160 H~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~ 239 (393)
|++ |++|+||||+||+++.++ .++|+|||++.....
T Consensus 146 H~~-~i~H~dlkp~Nill~~~~-------------------------------------------~~kl~dfg~~~~~~~ 181 (295)
T cd05097 146 ASL-NFVHRDLATRNCLVGNHY-------------------------------------------TIKIADFGMSRNLYS 181 (295)
T ss_pred Hhc-CeeccccChhhEEEcCCC-------------------------------------------cEEeccccccccccc
Confidence 998 999999999999998665 499999998875432
Q ss_pred CC-----CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChH
Q psy12288 240 HF-----ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT--GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312 (393)
Q Consensus 240 ~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 312 (393)
.. ....++..|+|||.+.+..++.++|+||||+++|+|++ +..||...+. ...+..+.......
T Consensus 182 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~------~~~~~~~~~~~~~~--- 252 (295)
T cd05097 182 GDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD------EQVIENTGEFFRNQ--- 252 (295)
T ss_pred CcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh------HHHHHHHHHhhhhc---
Confidence 21 12234678999999998889999999999999999988 6677765441 12222111110000
Q ss_pred HHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 313 VLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
. .......+...+..+.+|+++||..||.+||+++++++
T Consensus 253 ----~---------------------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 253 ----G---------------------------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred ----c---------------------------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0 00000011234568899999999999999999999875
No 324
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.9e-35 Score=266.97 Aligned_cols=237 Identities=19% Similarity=0.285 Sum_probs=183.8
Q ss_pred EecccCceEEEEEEe--CCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 35 KLGWGHFSTVWLSWD--LQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+||+|+||.||+|.. ..++..+|+|+++.... ..+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~~- 66 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL--------------DNPYIVRMIGICE- 66 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC--------------CCCCcceEEEEEc-
Confidence 689999999999964 45678899998864322 235678889999988 8899999887653
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
+...++|||++ +++|.+++... ..+++..+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 67 ----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~nill~~~~------- 132 (257)
T cd05116 67 ----AESWMLVMELAELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEET-NFVHRDLAARNVLLVTQH------- 132 (257)
T ss_pred ----CCCcEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhhEEEcCCC-------
Confidence 34578999999 57788877654 3488999999999999999999998 999999999999997665
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhHHHhcCCCC
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+....... ....++..|+|||.+....++
T Consensus 133 ------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 176 (257)
T cd05116 133 ------------------------------------YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFS 176 (257)
T ss_pred ------------------------------------eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcC
Confidence 49999999987654321 122335789999999888889
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |..||.... .......+.. +.
T Consensus 177 ~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~i~~--~~--------------------------------- 215 (257)
T cd05116 177 SKSDVWSFGVLMWEAFSYGQKPYKGMK------GNEVTQMIES--GE--------------------------------- 215 (257)
T ss_pred chhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHC--CC---------------------------------
Confidence 99999999999999998 999997543 1122221111 00
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||+.||++||++++|.+.
T Consensus 216 ------~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 216 ------RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred ------CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 011223456788899999999999999999998764
No 325
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.5e-35 Score=272.88 Aligned_cols=254 Identities=18% Similarity=0.300 Sum_probs=192.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCC----------------ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDK----------------TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
.+|++.++||+|+||.||+|.+..++ ..||+|.+.... ...+.+.+|+.+++.+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-------- 76 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-------- 76 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc--------
Confidence 47999999999999999999877643 458999887543 2345677899999999
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHh
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD---------YKGIHIQNVRTIIKQVLEGLNYL 159 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~---------~~~l~~~~~~~i~~ql~~~l~~l 159 (393)
.|+|++++++.+. .+...+++||++ +++|..++.... ...++...+..++.|++.||+||
T Consensus 77 ------~~~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~L 146 (296)
T cd05051 77 ------SDPNIARLLGVCT----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYL 146 (296)
T ss_pred ------CCCCEeEEEEEEe----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7899999988876 557899999999 678888876543 12478899999999999999999
Q ss_pred hhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC
Q psy12288 160 HTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD 239 (393)
Q Consensus 160 H~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~ 239 (393)
|+. |++|+||||+||+++.++ .++|+|||++.....
T Consensus 147 H~~-~i~H~dlkp~Nili~~~~-------------------------------------------~~~l~dfg~~~~~~~ 182 (296)
T cd05051 147 ESL-NFVHRDLATRNCLVGKNY-------------------------------------------TIKIADFGMSRNLYS 182 (296)
T ss_pred HHc-CccccccchhceeecCCC-------------------------------------------ceEEccccceeeccc
Confidence 998 999999999999998775 499999999875432
Q ss_pred C-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChH
Q psy12288 240 H-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT--GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312 (393)
Q Consensus 240 ~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 312 (393)
. .....++..|+|||.+.+..++.++||||||+++|+|++ +..||...+ ....+..........
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~------~~~~~~~~~~~~~~~--- 253 (296)
T cd05051 183 SDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT------DQQVIENAGHFFRDD--- 253 (296)
T ss_pred CcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC------hHHHHHHHHhccccc---
Confidence 2 122345678999999998889999999999999999998 677775433 122222221110000
Q ss_pred HHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 313 VLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
. .....+.+..++..+.+++.+||..||.+|||+.|+++.
T Consensus 254 ---------------~----------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 254 ---------------G----------------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred ---------------c----------------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence 0 000001123345688999999999999999999999753
No 326
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.4e-35 Score=265.48 Aligned_cols=245 Identities=21% Similarity=0.375 Sum_probs=190.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.+|++.+.||+|+||.||+|.+. .+..+|+|.+.........+.+|+.+++.+ .|++++++++.+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~ 68 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKL--------------SHPKLVQLYGVC 68 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhC--------------CCCCeeeEEEEE
Confidence 36899999999999999999775 466799998876555556788999999998 788999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....+++|||+ +++|.+.+.... ..++.+.+..++.|++.|+++||+. +++|+||+|+||+++.++
T Consensus 69 ~----~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~dl~p~ni~i~~~~----- 137 (256)
T cd05112 69 T----ERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS-NVIHRDLAARNCLVGENQ----- 137 (256)
T ss_pred c----cCCceEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccccccccceEEEcCCC-----
Confidence 6 556789999999 677777765432 3478899999999999999999998 999999999999997665
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+....... ....++..|+|||.+.+..++
T Consensus 138 --------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~ 179 (256)
T cd05112 138 --------------------------------------VVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYS 179 (256)
T ss_pred --------------------------------------eEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcC
Confidence 49999999887543221 122345689999999988899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |..||.... ....+..+.. + .+.
T Consensus 180 ~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~--~-------------~~~------------------ 220 (256)
T cd05112 180 SKSDVWSFGVLMWEVFSEGKTPYENRS------NSEVVETINA--G-------------FRL------------------ 220 (256)
T ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHHhC--C-------------CCC------------------
Confidence 99999999999999998 999996433 1111111100 0 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+...+..+.+|+++||..+|.+|||+.++++.
T Consensus 221 --------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 221 --------YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred --------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 0112235678899999999999999999999864
No 327
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.7e-35 Score=265.82 Aligned_cols=244 Identities=20% Similarity=0.311 Sum_probs=192.8
Q ss_pred EEEEEEecccCceEEEEEEeCCCC----ceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDK----TFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+++.+.||.|+||.||+|.+..++ ..||+|.+..... ....+.+|+.+++.+ .|++++++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~ 66 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL--------------DHPNIVKL 66 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc--------------CCCchheE
Confidence 356789999999999999998766 8899999875543 356788899999998 78899999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .....+++||++ ++++.+.+.......+++..+..++.|++.||++||+. +++|+||+|+||+++.++
T Consensus 67 ~~~~~----~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~~~h~dl~~~nil~~~~~- 140 (258)
T smart00219 67 LGVCT----EEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHRDLAARNCLVGENL- 140 (258)
T ss_pred EEEEc----CCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-CeeecccccceEEEccCC-
Confidence 98887 456799999999 77888887664433389999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----CCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----DEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||.+........ ...++..|+|||.+.+
T Consensus 141 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~ 178 (258)
T smart00219 141 ------------------------------------------VVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKD 178 (258)
T ss_pred ------------------------------------------eEEEcccCCceecccccccccccCCCcccccChHHhcc
Confidence 499999999876543211 1235788999999988
Q ss_pred CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..++.++|+||||+++++|++ |..||...+ .......+.. +.
T Consensus 179 ~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~------~~~~~~~~~~--~~----------------------------- 221 (258)
T smart00219 179 GKFTSKSDVWSFGVLLWEIFTLGESPYPGMS------NEEVLEYLKK--GY----------------------------- 221 (258)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhc--CC-----------------------------
Confidence 888999999999999999998 888886533 1111111110 00
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.+++.+||..||++|||+.|+++
T Consensus 222 ----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 222 ----------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ----------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 00112335678889999999999999999999986
No 328
>KOG4721|consensus
Probab=100.00 E-value=1e-36 Score=283.81 Aligned_cols=233 Identities=24% Similarity=0.322 Sum_probs=192.7
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
++-||.|+.|.||+|+. .++.||||.++. .-..++.-|+.| .|+||+.+.+++.
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~e------lkETdIKHLRkL--------------kH~NII~FkGVCt---- 182 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVRE------LKETDIKHLRKL--------------KHPNIITFKGVCT---- 182 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhh------hhhhhHHHHHhc--------------cCcceeeEeeeec----
Confidence 45689999999999965 478899997652 123467778888 8999999999997
Q ss_pred CCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhh
Q psy12288 113 NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDA 191 (393)
Q Consensus 113 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~ 191 (393)
....+||||||| .|-|...+... ..+.......+..+|+.|+.|||.+ .|+|||||.-|||+..+.
T Consensus 183 qsPcyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~h-KIIHRDLKSPNiLIs~~d---------- 249 (904)
T KOG4721|consen 183 QSPCYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLH-KIIHRDLKSPNILISYDD---------- 249 (904)
T ss_pred CCceeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHh-hHhhhccCCCceEeeccc----------
Confidence 667799999999 88899888776 3488899999999999999999998 999999999999998887
Q ss_pred hcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCCchhhHHh
Q psy12288 192 TKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGPAADIWS 269 (393)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwS 269 (393)
.+|++|||.++..... .-..+||..|||||++.+.+++.++||||
T Consensus 250 ---------------------------------~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwS 296 (904)
T KOG4721|consen 250 ---------------------------------VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWS 296 (904)
T ss_pred ---------------------------------eEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceeh
Confidence 4999999998766433 23468999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhc
Q psy12288 270 TACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKY 349 (393)
Q Consensus 270 lG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (393)
|||++|||+||..||.+.+...+ +--.|. ..-.+
T Consensus 297 fGVVLWEmLT~EiPYkdVdssAI----------IwGVGs------------------------------------NsL~L 330 (904)
T KOG4721|consen 297 FGVVLWEMLTGEIPYKDVDSSAI----------IWGVGS------------------------------------NSLHL 330 (904)
T ss_pred hHHHHHHHHhcCCCccccchhee----------EEeccC------------------------------------Ccccc
Confidence 99999999999999975542211 110110 00123
Q ss_pred cCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 350 HWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 350 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.+..++..|.=||++||.-.|..||+++|++.|
T Consensus 331 pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 331 PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence 4567888999999999999999999999999998
No 329
>KOG4645|consensus
Probab=100.00 E-value=2.2e-37 Score=311.77 Aligned_cols=255 Identities=28% Similarity=0.409 Sum_probs=207.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
..+++-.-+||.|.||.||.|.+..+|+..|+|-++-. ....+...+|..++..+ .|||+++.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l--------------nHpNlV~Y 1299 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL--------------NHPNLVRY 1299 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc--------------cCcccccc
Confidence 35788889999999999999999999999999976533 23345678899999999 99999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++=. .....+|.|||| +|+|.+++..+.. ..+...+.+-.|++.|++|||++ |||||||||+||+++.++
T Consensus 1300 yGVEv----HRekv~IFMEyC~~GsLa~ll~~gri--~dE~vt~vyt~qll~gla~LH~~-gIVHRDIK~aNI~Ld~~g- 1371 (1509)
T KOG4645|consen 1300 YGVEV----HREKVYIFMEYCEGGSLASLLEHGRI--EDEMVTRVYTKQLLEGLAYLHEH-GIVHRDIKPANILLDFNG- 1371 (1509)
T ss_pred Cceee----cHHHHHHHHHHhccCcHHHHHHhcch--hhhhHHHHHHHHHHHHHHHHHhc-CceecCCCccceeeecCC-
Confidence 88766 566788999999 8899988877532 55666778899999999999998 999999999999999887
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHH
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEV 255 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~ 255 (393)
.+|++|||.|.....+ .....||+.|||||+
T Consensus 1372 ------------------------------------------~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEv 1409 (1509)
T KOG4645|consen 1372 ------------------------------------------LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEV 1409 (1509)
T ss_pred ------------------------------------------cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchh
Confidence 4999999999876443 234589999999999
Q ss_pred HhcC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 256 LIGA---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 256 ~~~~---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
+.+. +...+.|||||||++.||+||+.||...+ .-..|+-..|.-
T Consensus 1410 it~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d---------ne~aIMy~V~~g----------------------- 1457 (1509)
T KOG4645|consen 1410 ITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD---------NEWAIMYHVAAG----------------------- 1457 (1509)
T ss_pred hcccccCCCCcchhhhcccceEEEeecCCCchhhcc---------chhHHHhHHhcc-----------------------
Confidence 9874 46889999999999999999999996433 223333322211
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.+..+|...+.+..+||.+||..||.+|+++.|+++|-|-+.+.+
T Consensus 1458 --------------h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1458 --------------HKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred --------------CCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 111144557888899999999999999999999999999877654
No 330
>KOG0584|consensus
Probab=100.00 E-value=2.2e-36 Score=285.79 Aligned_cols=254 Identities=27% Similarity=0.415 Sum_probs=205.8
Q ss_pred CCeEE-EEEEecccCceEEEEEEeCCCCceEE---EEE--EecccccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYH-VIRKLGWGHFSTVWLSWDLQDKTFVA---LKI--VKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~-~~~~lg~G~~g~V~~~~~~~~~~~va---iK~--~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..+|- ...+||+|+|-.||+|.+..+|..|| +|+ +..++...+++..|+.+|+.| .|+||
T Consensus 38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL--------------~H~NI 103 (632)
T KOG0584|consen 38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL--------------KHPNI 103 (632)
T ss_pred CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC--------------CCCce
Confidence 34554 34689999999999999999998887 332 223444568999999999999 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC-CeeeccCCCCceEEe
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC-RIIHTDIKPENILMC 178 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~-~i~H~dlkp~NIl~~ 178 (393)
+++++++... .+..+.+|+|.+ .|+|..+..+.. .++...++.+++||++||.|||.+. .|+|||||=+||+++
T Consensus 104 irfy~SW~d~--~n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin 179 (632)
T KOG0584|consen 104 IRFYDSWVDT--DNKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN 179 (632)
T ss_pred eeeeeheecC--CCceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc
Confidence 9999999843 446788999999 899999988764 4889999999999999999999874 399999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCC-CCCCCCCchhHHHh
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFAD-EIQTRQYRSVEVLI 257 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~-~~~t~~y~aPE~~~ 257 (393)
.+- +.+|++|+|+|.....+... -+|||.|||||+..
T Consensus 180 G~~------------------------------------------G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE 217 (632)
T KOG0584|consen 180 GNL------------------------------------------GEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE 217 (632)
T ss_pred CCc------------------------------------------CceeecchhHHHHhhccccceeccCccccChHHHh
Confidence 653 35999999999887766554 48999999999998
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
..|...+||||||+.++||+|+.+||..+.. -+.|++ +.+-+.+.-+
T Consensus 218 -E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n---------~AQIYKKV~SGiKP~sl---------------------- 265 (632)
T KOG0584|consen 218 -ENYNELVDVYAFGMCMLEMVTSEYPYSECTN---------PAQIYKKVTSGIKPAAL---------------------- 265 (632)
T ss_pred -hhcchhhhhhhhhHHHHHHHhccCChhhhCC---------HHHHHHHHHcCCCHHHh----------------------
Confidence 4499999999999999999999999976552 233433 2222222221
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..-..+++.+||.+||.. .++|||+.|||.||||..
T Consensus 266 ---------------~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 266 ---------------SKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE 301 (632)
T ss_pred ---------------hccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence 122356788999999999 999999999999999976
No 331
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.5e-35 Score=273.15 Aligned_cols=248 Identities=21% Similarity=0.296 Sum_probs=189.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC-------CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ-------DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
.++|++.++||+|+||.||+|.+.. ....+|+|.++... .....+.+|+.+++.+. .|
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h 77 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG-------------KH 77 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-------------CC
Confidence 3689999999999999999997643 24569999877432 22345678988888872 58
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
+|++++++.+. .....+++|||+ +++|.+++.... ...++..++..++.|++.||.|||++
T Consensus 78 ~~iv~~~~~~~----~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 153 (314)
T cd05099 78 KNIINLLGVCT----QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR 153 (314)
T ss_pred CCeeeEEEEEc----cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC
Confidence 99999998876 456789999999 788888886532 13478888999999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
|++|+||||+||+++.++ .++|+|||+++.....
T Consensus 154 -gi~H~dlkp~Nill~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~~ 189 (314)
T cd05099 154 -RCIHRDLAARNVLVTEDN-------------------------------------------VMKIADFGLARGVHDIDY 189 (314)
T ss_pred -CeeeccccceeEEEcCCC-------------------------------------------cEEEcccccccccccccc
Confidence 999999999999997766 4999999998755321
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.....++..|+|||.+.+..++.++|+||||+++|+|++ |..||..... ......+.. +.
T Consensus 190 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~------~~~~~~~~~--~~-------- 253 (314)
T cd05099 190 YKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV------EELFKLLRE--GH-------- 253 (314)
T ss_pred ccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHc--CC--------
Confidence 112233467999999998889999999999999999999 8899865431 111111110 00
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.+++.+||..||.+|||+.++++
T Consensus 254 -------------------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 254 -------------------------------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred -------------------------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 00112344567889999999999999999999876
No 332
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-35 Score=273.38 Aligned_cols=247 Identities=17% Similarity=0.259 Sum_probs=190.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.+|++.++||+|+||.||+|....+ +..||+|.+..... ....+.+|+.++..+ .|+|+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~~i 70 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL--------------QHPNI 70 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC--------------CCCCc
Confidence 3588889999999999999987643 56799999875432 234567788888887 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
+++++.+. .....++++||+ ++++..++.... ...++...+..++.|++.||+|||++ |+
T Consensus 71 v~~~~~~~----~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-gi 145 (283)
T cd05091 71 VCLLGVVT----KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-HV 145 (283)
T ss_pred CeEEEEEc----CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-Cc
Confidence 99998876 556689999998 677777764221 12377888899999999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----- 240 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----- 240 (393)
+||||||+||+++.++ .++|+|||+++.....
T Consensus 146 ~H~dlkp~Nil~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~ 182 (283)
T cd05091 146 VHKDLATRNVLVFDKL-------------------------------------------NVKISDLGLFREVYAADYYKL 182 (283)
T ss_pred cccccchhheEecCCC-------------------------------------------ceEecccccccccccchheee
Confidence 9999999999997665 4999999988754322
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
.....+++.|+|||.+.+..++.++||||||+++|+|++ |..||.+.. ....+..+... .
T Consensus 183 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~i~~~--~----------- 243 (283)
T cd05091 183 MGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS------NQDVIEMIRNR--Q----------- 243 (283)
T ss_pred ccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcC--C-----------
Confidence 123345678999999988889999999999999999998 888886543 22222222110 0
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||+.+|.+||++++++..
T Consensus 244 ----------------------------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 244 ----------------------------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred ----------------------------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 001224566778899999999999999999999875
No 333
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.3e-35 Score=277.90 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=188.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|.+. .+++.||||+++.+.. ....+.+|+.+++.+. .|+|
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~n 72 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-------------HHLN 72 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc-------------CCcc
Confidence 468999999999999999999843 4577899999875322 2345678999999883 5789
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
++++++.+.. .+...+++|||+ +++|.+++....
T Consensus 73 iv~~~~~~~~---~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (343)
T cd05103 73 VVNLLGACTK---PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSAS 149 (343)
T ss_pred Hhhhcceeec---CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccccccccc
Confidence 9999887752 345688999999 788888775421
Q ss_pred -----------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhc
Q psy12288 137 -----------------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193 (393)
Q Consensus 137 -----------------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~ 193 (393)
...++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~~------------ 216 (343)
T cd05103 150 SGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSENN------------ 216 (343)
T ss_pred ccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCccCeEEEcCCC------------
Confidence 01256777889999999999999998 999999999999998665
Q ss_pred ccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||++...... .....++..|+|||.+.+..++.++|+|
T Consensus 217 -------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 265 (343)
T cd05103 217 -------------------------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 265 (343)
T ss_pred -------------------------------cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHH
Confidence 4999999998754221 1122345679999999988899999999
Q ss_pred hHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 269 STACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 269 SlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
|||+++|+|++ |..||...... ..+..... .+..
T Consensus 266 slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~-~~~~-------------------------------------- 300 (343)
T cd05103 266 SFGVLLWEIFSLGASPYPGVKID------EEFCRRLK-EGTR-------------------------------------- 300 (343)
T ss_pred HHHHHHHHHHHCCCCCCCCcccc------HHHHHHHh-ccCC--------------------------------------
Confidence 99999999997 99998653311 11111100 0000
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..||.+|||+.++++|
T Consensus 301 -~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 301 -MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00112234578899999999999999999999987
No 334
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.7e-35 Score=272.87 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=189.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC----------------CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCC
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ----------------DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVH 88 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~ 88 (393)
.++|++.++||+|+||.||+|.+.. ++..+|+|++.... .....+.+|+.+++.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l------- 76 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL------- 76 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-------
Confidence 4579999999999999999986543 24468999887532 2235678899999998
Q ss_pred cccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHH
Q psy12288 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY---------KGIHIQNVRTIIKQVLEGLNY 158 (393)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~---------~~l~~~~~~~i~~ql~~~l~~ 158 (393)
.|++++++++.+. .+...+++|||+ +++|.+++..... ..++...+..++.|++.||++
T Consensus 77 -------~~~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~ 145 (296)
T cd05095 77 -------KDPNIIRLLAVCI----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKY 145 (296)
T ss_pred -------CCCCcceEEEEEe----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHH
Confidence 7899999998876 556789999999 7788888765321 235677899999999999999
Q ss_pred hhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc
Q psy12288 159 LHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID 238 (393)
Q Consensus 159 lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~ 238 (393)
||+. |++|+||||+||+++.++ .++|+|||++....
T Consensus 146 lH~~-~i~H~dlkp~Nili~~~~-------------------------------------------~~~l~dfg~~~~~~ 181 (296)
T cd05095 146 LSSL-NFVHRDLATRNCLVGKNY-------------------------------------------TIKIADFGMSRNLY 181 (296)
T ss_pred HHHC-CeecccCChheEEEcCCC-------------------------------------------CEEeccCccccccc
Confidence 9998 999999999999997665 49999999987543
Q ss_pred CCC-----CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh
Q psy12288 239 DHF-----ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT--GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311 (393)
Q Consensus 239 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~ 311 (393)
... ....++..|++||...+..++.++|+|||||++|+|++ |..||...+..+ ........
T Consensus 182 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~------~~~~~~~~------ 249 (296)
T cd05095 182 SGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ------VIENTGEF------ 249 (296)
T ss_pred CCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH------HHHHHHHH------
Confidence 221 11233578999999988889999999999999999998 778886544211 11110000
Q ss_pred HHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 312 EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
+...+. ....+.+..++..+.+|+.+||..||.+||++.++++
T Consensus 250 ------------~~~~~~----------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 250 ------------FRDQGR----------------QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ------------Hhhccc----------------cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 000000 0000112334578889999999999999999999875
No 335
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.2e-35 Score=267.49 Aligned_cols=246 Identities=16% Similarity=0.228 Sum_probs=190.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++|+..+.||+|++|.||+|....++. .+++|.+.... ...+.+..|+.+++.+ .|+|+++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 70 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF--------------SHHNIIR 70 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC--------------CCCCeeE
Confidence 579999999999999999999876654 68999876432 2245677888888888 7899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. .....++|||++ +++|..++.... ..++...+..++.|++.|+++||+. |++|+||||+||+++.++
T Consensus 71 ~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nili~~~~ 144 (268)
T cd05063 71 LEGVVT----KFKPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDM-NYVHRDLAARNILVNSNL 144 (268)
T ss_pred EEEEEc----cCCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEEcCCC
Confidence 988876 556789999999 667777765433 4588999999999999999999998 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC------CCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------DEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~------~~~~t~~y~aPE~ 255 (393)
.++++|||++........ ....+..|+|||.
T Consensus 145 -------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 181 (268)
T cd05063 145 -------------------------------------------ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEA 181 (268)
T ss_pred -------------------------------------------cEEECCCccceecccccccceeccCCCcCceecCHHH
Confidence 499999998875532211 1122456999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++|+||||+++|++++ |..||...+ .......+.. ....
T Consensus 182 ~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~------~~~~~~~i~~-~~~~------------------------- 229 (268)
T cd05063 182 IAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS------NHEVMKAIND-GFRL------------------------- 229 (268)
T ss_pred hhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC------HHHHHHHHhc-CCCC-------------------------
Confidence 998888999999999999999997 999996543 1122222211 0110
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.+...+..+.+++.+||..+|.+||++.++++.
T Consensus 230 ---------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 230 ---------------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred ---------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1112345678899999999999999999999863
No 336
>KOG1167|consensus
Probab=100.00 E-value=1.4e-36 Score=274.90 Aligned_cols=328 Identities=23% Similarity=0.310 Sum_probs=215.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCC---CCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQ---DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+...|.++++||+|+|+.||+|.+.. .++.||+|.+... ....++.+|+++|..++ ++.||++
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-s~p~ri~~El~~L~~~g-------------G~~ni~~ 99 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-SSPSRILNELEMLYRLG-------------GSDNIIK 99 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-cCchHHHHHHHHHHHhc-------------cchhhhc
Confidence 34589999999999999999999887 6889999987654 35678999999999996 7788899
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+++. +++++++|+||++..-+..+... ++..+++.+++.++.||+++|.+ ||+||||||.|++.+..-.
T Consensus 100 ~~~~~r----nnd~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~-GIvHRDiKpsNFL~n~~t~ 170 (418)
T KOG1167|consen 100 LNGCFR----NNDQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKN-GIVHRDIKPSNFLYNRRTQ 170 (418)
T ss_pred chhhhc----cCCeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhcc-CccccCCCccccccccccC
Confidence 999987 88999999999976656555543 77899999999999999999998 9999999999998863322
Q ss_pred --------HHhHhhhhhhcccccCCcCCCCCC-CCCCCCCCCCCCcccccceEEEee-cCccc--cc--cCCCCCCCCCC
Q psy12288 183 --------KVRRMARDATKHHKIGMKLPMSLD-STMSDFSLLDPANEVYDISVKIAD-LGNAC--WI--DDHFADEIQTR 248 (393)
Q Consensus 183 --------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~kl~d-fg~~~--~~--~~~~~~~~~t~ 248 (393)
.++............+.+.+.... .+..-.+... +.... -|..+ .. ........||+
T Consensus 171 rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~---------~~~~~p~g~~~~~~~~r~~~~anrAGT~ 241 (418)
T KOG1167|consen 171 RGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSV---------ATASKPAGYYRRCNDGRPSERANRAGTP 241 (418)
T ss_pred CceEEechhHHHHHhhhhhhhhhhhhcccCCccccCccccccc---------ccccCCCCceeccCCCccceecccCCCC
Confidence 222111111111111111111000 0000000000 00000 00001 00 12244668999
Q ss_pred CCchhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 249 QYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 249 ~y~aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
+|+|||++...+ .++++||||.||+++.++++.+||-.... +.+.+.++..+.|.......-..-...-.+..+
T Consensus 242 GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~d-----d~~al~ei~tifG~~~mrk~A~l~g~~~l~~ks 316 (418)
T KOG1167|consen 242 GFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKD-----DADALAEIATIFGSAEMRKCAALPGRILLWQKS 316 (418)
T ss_pred CCCchHHHhhccCcCCccceeeccceeehhhccccccccCcc-----ccchHHHHHHHhChHHHHHHhhcCCceeeeccc
Confidence 999999999876 69999999999999999999999964432 667788888888864432211111110011111
Q ss_pred CCeeeccC---CCcch-hHHHHh------hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 328 GNFRRIDN---LKPWG-LYQVLT------EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 328 ~~~~~~~~---~~~~~-~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
. ...+.. ....- ...+.+ ....+.+..+..+++|+.+||..||.+|+||+++|.||||....+
T Consensus 317 n-~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~ 389 (418)
T KOG1167|consen 317 N-IPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADR 389 (418)
T ss_pred c-ccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhh
Confidence 0 000000 00000 000011 112233445668999999999999999999999999999997654
No 337
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.6e-35 Score=265.65 Aligned_cols=238 Identities=18% Similarity=0.299 Sum_probs=185.1
Q ss_pred EEecccCceEEEEEEeCCCC---ceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQDK---TFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++||+|+||.||+|....++ ..+|+|.+..... ..+.+.+|+.+++.+ .|++++++++.+.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~~ 66 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL--------------DHPCIVRLIGVCK 66 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc--------------CCCCeeeEEEEEc
Confidence 47999999999999876655 6899998875543 345678899999988 7899999988653
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
+...+++||++ +++|.+.+.... .+++..+..++.|++.||++||++ +++|+||||+||+++.++
T Consensus 67 -----~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~nili~~~~------ 132 (257)
T cd05060 67 -----GEPLMLVMELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRH------ 132 (257)
T ss_pred -----CCceEEEEEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc-CeeccCcccceEEEcCCC------
Confidence 34579999998 678888886653 588999999999999999999998 999999999999998766
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC------CCCCCCCCchhHHHhcCCC
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------DEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~------~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||.+........ ...++..|+|||.+.+..+
T Consensus 133 -------------------------------------~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 175 (257)
T cd05060 133 -------------------------------------QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKF 175 (257)
T ss_pred -------------------------------------cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCC
Confidence 499999999876532211 1123467999999988889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|+||||+++|+|++ |..||...+. ......+... .
T Consensus 176 ~~~~Di~slG~~l~~~~~~g~~p~~~~~~------~~~~~~~~~~-~--------------------------------- 215 (257)
T cd05060 176 SSKSDVWSYGVTLWEAFSYGAKPYGEMKG------AEVIAMLESG-E--------------------------------- 215 (257)
T ss_pred CccchHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHcC-C---------------------------------
Confidence 999999999999999998 9999965431 1111111100 0
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+||++.++++.
T Consensus 216 -------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~ 251 (257)
T cd05060 216 -------RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST 251 (257)
T ss_pred -------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 001123445678899999999999999999998753
No 338
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.3e-35 Score=270.69 Aligned_cols=246 Identities=20% Similarity=0.303 Sum_probs=188.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+|++.+.||+|+||.||+|.+... ...+++|.+..... ..+.+.+|+.+++.+ .|+|++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv 66 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV--------------NHPHVI 66 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC--------------CCCCEe
Confidence 478899999999999999987542 35688998764322 235678899999998 799999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHH
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD----------------------YKGIHIQNVRTIIKQVLEGLNY 158 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------------------~~~l~~~~~~~i~~ql~~~l~~ 158 (393)
++++.+. ..+..++++||+ +++|.+++.... ...++...+..++.|++.||+|
T Consensus 67 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 142 (290)
T cd05045 67 KLYGACS----QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQY 142 (290)
T ss_pred eEEEEEe----cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHH
Confidence 9998876 556689999999 678887765421 1247788899999999999999
Q ss_pred hhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc
Q psy12288 159 LHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID 238 (393)
Q Consensus 159 lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~ 238 (393)
||+. +++||||||+||+++.++ .++|+|||+++...
T Consensus 143 LH~~-~ivH~dikp~nill~~~~-------------------------------------------~~kl~dfg~~~~~~ 178 (290)
T cd05045 143 LAEM-KLVHRDLAARNVLVAEGR-------------------------------------------KMKISDFGLSRDVY 178 (290)
T ss_pred HHHC-CeehhhhhhheEEEcCCC-------------------------------------------cEEecccccccccc
Confidence 9998 999999999999997765 49999999987542
Q ss_pred CC-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChH
Q psy12288 239 DH-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312 (393)
Q Consensus 239 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 312 (393)
.. .....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+.... . +.....
T Consensus 179 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~-~~~~~~-------- 243 (290)
T cd05045 179 EEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE------R-LFNLLK-------- 243 (290)
T ss_pred CccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH------H-HHHHHh--------
Confidence 21 112234678999999988889999999999999999998 99999654311 1 111100
Q ss_pred HHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 313 VLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.. ....+...+..+.+++.+||+.||.+||++.++++.
T Consensus 244 ------~~~--------------------------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 244 ------TGY--------------------------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKE 282 (290)
T ss_pred ------CCC--------------------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 000 000123445678899999999999999999998763
No 339
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.8e-35 Score=280.49 Aligned_cols=250 Identities=19% Similarity=0.279 Sum_probs=191.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|.+.++||+|+||.||+|.+. .+++.||+|+++.... ..+.+.+|+.+++.+. .|+|
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-------------~H~n 102 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG-------------PHLN 102 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC-------------CCCC
Confidence 467899999999999999999864 3456899999875422 2345778999999982 3899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
++++++.+. .....++||||+ +|+|.+++....
T Consensus 103 iv~~~~~~~----~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (401)
T cd05107 103 IVNLLGACT----KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGY 178 (401)
T ss_pred eEEEEEEEc----cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccc
Confidence 999998886 456799999999 789988875421
Q ss_pred ------------------------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 137 ------------------------------------------------------YKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 137 ------------------------------------------------------~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
...++...+..++.|++.||+|||+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 258 (401)
T cd05107 179 MDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK 258 (401)
T ss_pred cccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 11356677888999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
+++||||||+||+++.++ .++|+|||++......
T Consensus 259 -~ivHrdlkp~NiLl~~~~-------------------------------------------~~kL~DfGla~~~~~~~~ 294 (401)
T cd05107 259 -NCVHRDLAARNVLICEGK-------------------------------------------LVKICDFGLARDIMRDSN 294 (401)
T ss_pred -CcCcccCCcceEEEeCCC-------------------------------------------EEEEEecCcceecccccc
Confidence 999999999999997665 5999999998754321
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.....++..|+|||.+.+..++.++|+||||+++|+|++ |..||..... .+.+..... .+..
T Consensus 295 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~------~~~~~~~~~-~~~~------- 360 (401)
T cd05107 295 YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM------NEQFYNAIK-RGYR------- 360 (401)
T ss_pred cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc------hHHHHHHHH-cCCC-------
Confidence 122346788999999998889999999999999999998 8899864431 111111111 0100
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..+|.+||++++|++.
T Consensus 361 --------------------------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 361 --------------------------------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred --------------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 01123345688899999999999999999999875
No 340
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.8e-35 Score=268.37 Aligned_cols=245 Identities=18% Similarity=0.302 Sum_probs=184.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCce----EEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTF----VALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++|++.+.||+|+||.||+|.+..+++. +++|.+..... ....+..|+..++.+ .|+|++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l--------------~h~~iv 72 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL--------------DHAYIV 72 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC--------------CCCCcc
Confidence 4789999999999999999998877763 67776643211 123445566666666 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. +...++++|++ +++|.+.+.... ..+++..+..++.|++.||+|||++ +++|+||||+||+++.+
T Consensus 73 ~~~~~~~-----~~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~ 145 (279)
T cd05111 73 RLLGICP-----GASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEH-RMVHRNLAARNILLKSD 145 (279)
T ss_pred eEEEEEC-----CCccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCC
Confidence 9988653 33467889998 789988886543 4588999999999999999999998 99999999999999776
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~ 255 (393)
+ .++|+|||.++..... .....++..|++||.
T Consensus 146 ~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~ 182 (279)
T cd05111 146 S-------------------------------------------IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALES 182 (279)
T ss_pred C-------------------------------------------cEEEcCCccceeccCCCcccccCCCCCcccccCHHH
Confidence 5 4999999998754321 112345678999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++||||||+++|++++ |..||.+.... .+..+.. .+..+
T Consensus 183 ~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~-~~~~~------------------------ 230 (279)
T cd05111 183 ILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-------EVPDLLE-KGERL------------------------ 230 (279)
T ss_pred hccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHH-CCCcC------------------------
Confidence 998889999999999999999998 99999654311 1111111 01100
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+...+..+.+++.+||..||++|||+.|+++.
T Consensus 231 ---------------~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 231 ---------------AQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred ---------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0112234567899999999999999999998763
No 341
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.5e-35 Score=271.36 Aligned_cols=251 Identities=20% Similarity=0.302 Sum_probs=191.9
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCC-------CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQ-------DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
+-.++|++.+.||+|+||.||+|+... ++..||+|.+.... .....+.+|+.+++.+.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~------------- 78 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG------------- 78 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc-------------
Confidence 445799999999999999999997532 34579999886432 22356788999998873
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhh
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLH 160 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH 160 (393)
.|+|++++++.+. .....+++|||+ +++|.+++.... ...++...+..++.|++.||+|||
T Consensus 79 ~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 154 (304)
T cd05101 79 KHKNIINLLGACT----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA 154 (304)
T ss_pred cCCCchheeEEEe----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 6889999998886 556789999999 678888876532 123677888999999999999999
Q ss_pred hcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC
Q psy12288 161 TQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH 240 (393)
Q Consensus 161 ~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~ 240 (393)
++ |++|+||||+||+++.++ .++|+|||.+......
T Consensus 155 ~~-givH~dlkp~Nili~~~~-------------------------------------------~~kl~D~g~~~~~~~~ 190 (304)
T cd05101 155 SQ-KCIHRDLAARNVLVTENN-------------------------------------------VMKIADFGLARDVNNI 190 (304)
T ss_pred HC-CeeecccccceEEEcCCC-------------------------------------------cEEECCCccceecccc
Confidence 98 999999999999997665 4999999998765321
Q ss_pred -----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHH
Q psy12288 241 -----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314 (393)
Q Consensus 241 -----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~ 314 (393)
.....++..|+|||++.+..++.++||||||+++|+|++ |..||...+. ......+.. +.
T Consensus 191 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~--~~------ 256 (304)
T cd05101 191 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------EELFKLLKE--GH------ 256 (304)
T ss_pred cccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHc--CC------
Confidence 122334678999999998889999999999999999998 7888865431 111111100 00
Q ss_pred hcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+|||+.|+++.
T Consensus 257 ---------------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 257 ---------------------------------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred ---------------------------------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 000123455788899999999999999999999864
No 342
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.1e-35 Score=266.65 Aligned_cols=245 Identities=16% Similarity=0.264 Sum_probs=189.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+|++.+.||+|+||.||+|....+++ .||+|.+... ......+..|+.+++.+ .|+|++++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ni~~~ 70 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF--------------DHPNIIHL 70 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC--------------CCcCcceE
Confidence 58999999999999999999887764 5999988753 22345678899999988 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. .+...++||||+ +++|.+++.... ..++...++.++.|++.||++||++ |++|+||||+||+++.++
T Consensus 71 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~-g~~H~dl~p~nili~~~~- 143 (269)
T cd05065 71 EGVVT----KSRPVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEM-NYVHRDLAARNILVNSNL- 143 (269)
T ss_pred EEEEC----CCCceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccChheEEEcCCC-
Confidence 88876 566789999999 567777765433 4588999999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----C-C--CCCCCCchhH
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----D-E--IQTRQYRSVE 254 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~-~--~~t~~y~aPE 254 (393)
.++|+|||++........ . . ..+..|+|||
T Consensus 144 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE 181 (269)
T cd05065 144 ------------------------------------------VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPE 181 (269)
T ss_pred ------------------------------------------cEEECCCccccccccCccccccccccCCCcceeecCHh
Confidence 499999998765432111 0 1 1134699999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+.+..++.++|||||||++|++++ |..||...+. ......+... ..
T Consensus 182 ~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~------~~~~~~i~~~-~~------------------------- 229 (269)
T cd05065 182 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN------QDVINAIEQD-YR------------------------- 229 (269)
T ss_pred HhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH------HHHHHHHHcC-Cc-------------------------
Confidence 9998889999999999999999886 9999965441 1111111100 00
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.+.+.+.+..+.+++.+||..+|.+||++++++..
T Consensus 230 ---------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 230 ---------------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred ---------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01113345678899999999999999999999864
No 343
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.9e-35 Score=266.38 Aligned_cols=244 Identities=16% Similarity=0.190 Sum_probs=177.9
Q ss_pred EEecccCceEEEEEEeCCC------------CceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 34 RKLGWGHFSTVWLSWDLQD------------KTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~------------~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+.||+|+||.||+|..... ...|++|.+.... .....+.+|+.+++.+ .|+|+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l--------------~hp~i 66 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV--------------SHKHI 66 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC--------------CCCCE
Confidence 3689999999999975322 2358888876432 2234567788888888 89999
Q ss_pred eeccccceeecCCCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .....+++|||++ +++..++.. ....++...+..++.|++.||+|||++ +++||||||+||+++.
T Consensus 67 v~~~~~~~----~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~ 140 (262)
T cd05077 67 VLLYGVCV----RDVENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDK-DLVHGNVCTKNILLAR 140 (262)
T ss_pred eeEEEEEe----cCCCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhC-CeECCCCCcccEEEec
Confidence 99999876 4556789999994 555554433 334589999999999999999999998 9999999999999975
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh-c
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI-G 258 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~-~ 258 (393)
++.. ......++++|||++..... .....++..|+|||.+. +
T Consensus 141 ~~~~------------------------------------~~~~~~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~ 183 (262)
T cd05077 141 EGID------------------------------------GECGPFIKLSDPGIPITVLS-RQECVERIPWIAPECVEDS 183 (262)
T ss_pred CCcc------------------------------------CCCCceeEeCCCCCCccccC-cccccccccccChhhhcCC
Confidence 5420 01122489999998865432 22345788899999987 4
Q ss_pred CCCCchhhHHhHHHHHHHHH-hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELA-TGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell-~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..++.++|||||||++|+|+ .|..||...... ........
T Consensus 184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~----------~~~~~~~~----------------------------- 224 (262)
T cd05077 184 KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA----------EKERFYEG----------------------------- 224 (262)
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh----------HHHHHHhc-----------------------------
Confidence 56899999999999999998 488888643311 00000000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
........+..+.++|.+||..||.+||++.+|+++
T Consensus 225 ----------~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 225 ----------QCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ----------CccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 000112234578899999999999999999999875
No 344
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.2e-34 Score=288.29 Aligned_cols=276 Identities=20% Similarity=0.236 Sum_probs=176.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC----CceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD----KTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.++||+|+||.||+|.+..+ +..||+|.+.... ..|......+.+. .+.++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~------~~e~~~~e~l~~~-----------~~~~~~~ 193 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG------AVEIWMNERVRRA-----------CPNSCAD 193 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc------hhHHHHHHHHHhh-----------chhhHHH
Confidence 46899999999999999999999988 8999999876422 1222222222111 1111111
Q ss_pred cccccee-e-cCCCeEEEEEEeec-cccHHHHHHhcCCC------------------CCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 103 LLNDFKI-Y-SRNGTHICMVFEVM-GYNLLRLIARSDYK------------------GIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 103 ~~~~~~~-~-~~~~~~~~iv~e~~-~~~l~~~~~~~~~~------------------~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
+...+.. . ...+...++|+||+ +++|.+++...... ......+..++.|++.||+|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~ 273 (566)
T PLN03225 194 FVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS 273 (566)
T ss_pred HHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 2222111 0 13566799999999 67777777543210 01233466899999999999999
Q ss_pred cCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--
Q psy12288 162 QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-- 239 (393)
Q Consensus 162 ~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-- 239 (393)
+ +|+||||||+|||++.+.. .+||+|||++.....
T Consensus 274 ~-gIiHRDLKP~NILl~~~~~------------------------------------------~~KL~DFGlA~~l~~~~ 310 (566)
T PLN03225 274 T-GIVHRDVKPQNIIFSEGSG------------------------------------------SFKIIDLGAAADLRVGI 310 (566)
T ss_pred C-CEEeCcCCHHHEEEeCCCC------------------------------------------cEEEEeCCCcccccccc
Confidence 8 9999999999999975421 499999999975432
Q ss_pred --CCCCCCCCCCCchhHHHhcCC----------------------CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCc
Q psy12288 240 --HFADEIQTRQYRSVEVLIGAG----------------------YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRD 295 (393)
Q Consensus 240 --~~~~~~~t~~y~aPE~~~~~~----------------------~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~ 295 (393)
......+++.|+|||.+.... ++.++|||||||++|+|+++..++.. .
T Consensus 311 ~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--------~ 382 (566)
T PLN03225 311 NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--------N 382 (566)
T ss_pred ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--------H
Confidence 123456789999999765332 23456999999999999987655421 2
Q ss_pred HHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc
Q psy12288 296 DDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375 (393)
Q Consensus 296 ~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 375 (393)
...+..+....+.....+..... . ... ......+...+.......+||.+||+.||++||
T Consensus 383 ~~~~~~~l~~~~~~~~~~~~~~~-------~---------~~~----~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ 442 (566)
T PLN03225 383 LIQFNRQLKRNDYDLVAWRKLVE-------P---------RAS----PDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRI 442 (566)
T ss_pred HHHHHHHHHhcCCcHHHHHHhhc-------c---------ccc----hhhhhhhhhccccchHHHHHHHHHccCCcccCC
Confidence 22333333322221111110000 0 000 000011111223344667999999999999999
Q ss_pred CHHHHhcCCCCCCCC
Q psy12288 376 SAADCLRHPWLNPRR 390 (393)
Q Consensus 376 t~~ell~hp~~~~~~ 390 (393)
|++|+|+||||.+..
T Consensus 443 ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 443 SAKAALAHPYFDREG 457 (566)
T ss_pred CHHHHhCCcCcCCCC
Confidence 999999999998743
No 345
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.2e-34 Score=262.82 Aligned_cols=240 Identities=24% Similarity=0.296 Sum_probs=188.2
Q ss_pred EEecccCceEEEEEEeCC-CC--ceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQ-DK--TFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~-~~--~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++||+|++|.||+|.+.. .+ ..||+|.+..... ..+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~~ 66 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL--------------DHENLIRLYGVVL 66 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc--------------CCCCccceeEEEc
Confidence 368999999999998765 33 3689998875433 345678899999998 7899999988876
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
. ...+++||++ +++|.+.+.......+++..+..++.|++.||++||++ |++|+||+|+||+++.++
T Consensus 67 ----~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~di~p~nil~~~~~------ 134 (257)
T cd05040 67 ----T-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDD------ 134 (257)
T ss_pred ----C-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC-CccccccCcccEEEecCC------
Confidence 3 6789999999 78998888765434588999999999999999999998 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhcCCC
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+..+
T Consensus 135 -------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~ 177 (257)
T cd05040 135 -------------------------------------KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTF 177 (257)
T ss_pred -------------------------------------EEEeccccccccccccccceecccCCCCCceecCHHHhcccCc
Confidence 5999999998765432 112345778999999998889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|+||||+++|+|++ |..||...+ ..+....+.. .+.
T Consensus 178 ~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~-~~~-------------------------------- 218 (257)
T cd05040 178 SHASDVWMFGVTLWEMFTYGEEPWAGLS------GSQILKKIDK-EGE-------------------------------- 218 (257)
T ss_pred CchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHh-cCC--------------------------------
Confidence 999999999999999998 999996543 1222222111 000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.+++.+||..+|.+||++.++++
T Consensus 219 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 219 -------RLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred -------cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 00011234567889999999999999999999986
No 346
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.6e-34 Score=265.98 Aligned_cols=261 Identities=18% Similarity=0.251 Sum_probs=190.7
Q ss_pred CeEEEEEEecccCceEEEEEEe----CCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWD----LQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.+|++.+.||+|+||.||+|.. ..++..||+|.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~ 69 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL--------------QHDNIVK 69 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC--------------CCCCeeE
Confidence 4799999999999999999973 4568899999987543 2245678899999998 8899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+... ....+++||||+ +++|.+++.... ..++...+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 70 ~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~-~i~H~dlkp~nili~~~~ 145 (284)
T cd05081 70 YKGVCYSA--GRRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESEN 145 (284)
T ss_pred EEEEEccC--CCCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHhhEEECCCC
Confidence 88866432 345689999999 788888876542 3488999999999999999999998 999999999999997766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC------CCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------DEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~------~~~~t~~y~aPE~ 255 (393)
.++|+|||++........ ...++..|+|||.
T Consensus 146 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 182 (284)
T cd05081 146 -------------------------------------------RVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPES 182 (284)
T ss_pred -------------------------------------------eEEECCCcccccccCCCcceeecCCCCCceEeeCHHH
Confidence 499999999876532211 1223446999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh-HHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK-EVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++|+||||+++|+|++|..++...... .....+.... ...
T Consensus 183 ~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-------------------- 231 (284)
T cd05081 183 LTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-----------FMRMMGNDKQGQMI-------------------- 231 (284)
T ss_pred hccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-----------hhhhcccccccccc--------------------
Confidence 99888999999999999999999987765432210 0000000000 000
Q ss_pred CCCcchhHHHHh--hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLT--EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.......+. ...+.+...+..+.+++.+||..+|++|||+.++++.
T Consensus 232 ---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 232 ---VYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred ---hHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 000000000 0111223456788999999999999999999999864
No 347
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=7.7e-35 Score=268.68 Aligned_cols=246 Identities=20% Similarity=0.302 Sum_probs=189.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|++...||+|+||.||+|.+.. ++..||+|.+.... .....+.+|+.+++.+ .|+++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l--------------~h~~i 70 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF--------------DHPNI 70 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc--------------CCCch
Confidence 579999999999999999998753 57789999887432 2235577899999998 88999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------------CCCCCHHHHHHHHHHHHHHHHHh
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------------YKGIHIQNVRTIIKQVLEGLNYL 159 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------------~~~l~~~~~~~i~~ql~~~l~~l 159 (393)
+++++.+. .+...+++|||+ +++|.+++.... ...++...+..++.|++.||++|
T Consensus 71 v~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~l 146 (288)
T cd05050 71 VKLLGVCA----VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL 146 (288)
T ss_pred heEEEEEc----CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence 99988776 556789999999 678888876432 12367778899999999999999
Q ss_pred hhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC
Q psy12288 160 HTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD 239 (393)
Q Consensus 160 H~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~ 239 (393)
|++ +++|+||||+||+++.++ .++|+|||++.....
T Consensus 147 H~~-~i~H~dl~p~nil~~~~~-------------------------------------------~~~l~dfg~~~~~~~ 182 (288)
T cd05050 147 SER-KFVHRDLATRNCLVGENM-------------------------------------------VVKIADFGLSRNIYS 182 (288)
T ss_pred HhC-CeecccccHhheEecCCC-------------------------------------------ceEECccccceeccc
Confidence 998 999999999999997766 499999998865422
Q ss_pred C-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHH
Q psy12288 240 H-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313 (393)
Q Consensus 240 ~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~ 313 (393)
. ......+..|+|||.+.+..++.++|+|||||++|+|++ |..||.+.+. .+....+.. +..
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~------~~~~~~~~~--~~~---- 250 (288)
T cd05050 183 ADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH------EEVIYYVRD--GNV---- 250 (288)
T ss_pred CccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhc--CCC----
Confidence 1 112234667999999998889999999999999999997 8888865431 111111100 000
Q ss_pred HhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+||.+||..||.+|||+.|+++
T Consensus 251 -----------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 251 -----------------------------------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred -----------------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 0112344567889999999999999999999875
No 348
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6.6e-35 Score=266.14 Aligned_cols=245 Identities=16% Similarity=0.237 Sum_probs=190.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.+|++.+.||+|+||.||+|.+..++. .+|+|.++... .....+.+|+.+++.+ .|+|+++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 69 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF--------------DHPNIIH 69 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC--------------CCCCcce
Confidence 479999999999999999998865543 69999876432 2235678899999988 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. .+...+++||++ +++|.+.+.... ..++..++..++.|++.|+++||++ +++|+||||+||+++.++
T Consensus 70 ~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~ 143 (267)
T cd05066 70 LEGVVT----KSKPVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILVNSNL 143 (267)
T ss_pred EEEEEe----cCCccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeehhhchhcEEECCCC
Confidence 988876 566799999999 678887776543 4578899999999999999999998 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE~ 255 (393)
.++++|||.+....... ....++..|++||.
T Consensus 144 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~ 180 (267)
T cd05066 144 -------------------------------------------VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 180 (267)
T ss_pred -------------------------------------------eEEeCCCCcccccccccceeeecCCCccceeecCHhH
Confidence 49999999887553221 11223467999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++|+||||+++|++++ |..||...+.. .....+.....
T Consensus 181 ~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~------~~~~~~~~~~~--------------------------- 227 (267)
T cd05066 181 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ------DVIKAIEEGYR--------------------------- 227 (267)
T ss_pred hccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH------HHHHHHhCCCc---------------------------
Confidence 998889999999999999999886 99999654421 11111111000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.+...+..+.+++.+||+.+|.+||++.++++
T Consensus 228 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 228 --------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred --------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 0111234567889999999999999999999875
No 349
>KOG0193|consensus
Probab=100.00 E-value=4.4e-36 Score=282.23 Aligned_cols=244 Identities=20% Similarity=0.318 Sum_probs=189.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
-+...+.+.||+|.||.||+|++..+ ||||+++.. ....+.|++|+.+++.- .|.||+-+
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkT--------------RH~NIlLF 453 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKT--------------RHENILLF 453 (678)
T ss_pred HHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhc--------------chhhheee
Confidence 34677899999999999999988744 999999743 34567889999999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+++- +.. +.||+.+| |.+|..++.-.. ..|.....+.|++|++.|+.|||.+ +|+|||||..||++..+.
T Consensus 454 MG~~~----~p~-~AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK-~IIHrDLKSnNIFl~~~~- 525 (678)
T KOG0193|consen 454 MGACM----NPP-LAIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK-NIIHRDLKSNNIFLHEDL- 525 (678)
T ss_pred ehhhc----CCc-eeeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh-hhhhhhccccceEEccCC-
Confidence 99886 444 49999999 556665554333 5588899999999999999999999 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-----CCCCCCCCCCCCchhHHHh
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-----DHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-----~~~~~~~~t~~y~aPE~~~ 257 (393)
++|++|||++..-. .......|...|||||++.
T Consensus 526 ------------------------------------------kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIR 563 (678)
T KOG0193|consen 526 ------------------------------------------KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIR 563 (678)
T ss_pred ------------------------------------------cEEEecccceeeeeeeccccccCCCccchhhhcHHHHh
Confidence 59999999875322 1122345678899999997
Q ss_pred c---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHH--hCCCChHHHhcCcccccccCCCCCeee
Q psy12288 258 G---AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL--VGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 258 ~---~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
. .+|++.+||||||+++|||++|..||...+... |+-. .|...+
T Consensus 564 mqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq----------IifmVGrG~l~p--------------------- 612 (678)
T KOG0193|consen 564 MQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ----------IIFMVGRGYLMP--------------------- 612 (678)
T ss_pred hcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh----------eEEEecccccCc---------------------
Confidence 5 478999999999999999999999997333111 1000 010000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
........+..++.+|+..||.+++++||.+.+||.
T Consensus 613 --------------d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 613 --------------DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred --------------cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 000012456778999999999999999999999886
No 350
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=9.9e-35 Score=265.39 Aligned_cols=246 Identities=17% Similarity=0.258 Sum_probs=190.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC---CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.++|++.++||+|+||.||+|.+..+ ...|+||...... ...+.+.+|+.+++.+ .|+|++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~ 70 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF--------------DHPHIV 70 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC--------------CCCchh
Confidence 35799999999999999999987654 3468999876442 2345678899999998 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. ....+++||++ +++|.+++.... ..++...+..++.|++.||+|||+. +++|+||||+||+++.+
T Consensus 71 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~~~H~dl~p~nili~~~ 143 (270)
T cd05056 71 KLIGVIT-----ENPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSSP 143 (270)
T ss_pred ceeEEEc-----CCCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccChheEEEecC
Confidence 9988765 23468999999 778888876543 3488999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVL 256 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~ 256 (393)
+ .++|+|||++....... ....++..|+|||.+
T Consensus 144 ~-------------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 180 (270)
T cd05056 144 D-------------------------------------------CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESI 180 (270)
T ss_pred C-------------------------------------------CeEEccCceeeecccccceecCCCCccccccChhhh
Confidence 5 49999999887543221 122234679999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
....++.++|+||||+++|++++ |..||...+.. .....+.. +.
T Consensus 181 ~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~------~~~~~~~~--~~--------------------------- 225 (270)
T cd05056 181 NFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN------DVIGRIEN--GE--------------------------- 225 (270)
T ss_pred ccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHc--CC---------------------------
Confidence 88889999999999999999986 99999755421 11111110 00
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..+|.+|||+.+++..
T Consensus 226 ------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 226 ------------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred ------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001123456788899999999999999999998864
No 351
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.2e-34 Score=263.14 Aligned_cols=238 Identities=18% Similarity=0.303 Sum_probs=183.0
Q ss_pred EecccCceEEEEEEeC--CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 35 KLGWGHFSTVWLSWDL--QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
.||+|+||.||+|... .++..||+|++.... ...+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~ii~~~~~~~-- 65 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL--------------DNPYIVRMIGVCE-- 65 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc--------------CCCCeEEEEEEEc--
Confidence 4899999999999765 345679999886542 2235578899999998 7899999988764
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhh
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~ 189 (393)
....++||||+ +++|.+.+.... ..+++..+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 66 ---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~-------- 132 (257)
T cd05115 66 ---AEALMLVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGK-NFVHRDLAARNVLLVNQH-------- 132 (257)
T ss_pred ---CCCeEEEEEeCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhc-CeeecccchheEEEcCCC--------
Confidence 34589999999 677777765432 4589999999999999999999998 999999999999997665
Q ss_pred hhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....++..|+|||.+.+..++.
T Consensus 133 -----------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 177 (257)
T cd05115 133 -----------------------------------YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSS 177 (257)
T ss_pred -----------------------------------cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCc
Confidence 4999999988754322 11122356899999998888899
Q ss_pred hhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++|+||||+++|++++ |..||..... ......+.. +
T Consensus 178 ~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~--~----------------------------------- 214 (257)
T cd05115 178 RSDVWSYGITMWEAFSYGQKPYKKMKG------PEVMSFIEQ--G----------------------------------- 214 (257)
T ss_pred hhhHHHHHHHHHHHhcCCCCCcCcCCH------HHHHHHHHC--C-----------------------------------
Confidence 9999999999999996 9999975441 111111100 0
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....++...+.++.++|.+||..||++||++.++.+.
T Consensus 215 ----~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 215 ----KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0011234456788899999999999999999998765
No 352
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9e-35 Score=274.06 Aligned_cols=249 Identities=20% Similarity=0.299 Sum_probs=190.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-------CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-------KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
..+|++.+.||+|+||.||+|++... ...||+|.++... .....+.+|+.+++.+. .|
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h 77 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG-------------KH 77 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc-------------CC
Confidence 45899999999999999999986542 2368999877432 22356778999998883 58
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
+|++++++.+. .....+++|||+ +++|.+++.... ...++..++..++.|++.||+|||++
T Consensus 78 ~~iv~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 153 (334)
T cd05100 78 KNIINLLGACT----QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ 153 (334)
T ss_pred CCeeeeeEEEc----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 89999988876 556789999999 778888876532 12367788889999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
|++||||||+||+++.++ .++|+|||+++.....
T Consensus 154 -givH~dlkp~Nill~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~~ 189 (334)
T cd05100 154 -KCIHRDLAARNVLVTEDN-------------------------------------------VMKIADFGLARDVHNIDY 189 (334)
T ss_pred -CeeccccccceEEEcCCC-------------------------------------------cEEECCcccceecccccc
Confidence 999999999999997765 4999999998755322
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.....++..|+|||++.+..++.++||||||+++|+|++ |..||...+. .+....+.. +.
T Consensus 190 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~-------- 253 (334)
T cd05100 190 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------EELFKLLKE--GH-------- 253 (334)
T ss_pred cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHc--CC--------
Confidence 112233567999999998889999999999999999998 8889865431 111111100 00
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+|||+.|++++
T Consensus 254 -------------------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 254 -------------------------------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred -------------------------------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 001123445678899999999999999999999876
No 353
>KOG0664|consensus
Probab=100.00 E-value=3.7e-37 Score=263.86 Aligned_cols=287 Identities=28% Similarity=0.451 Sum_probs=217.6
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEec---ccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
-+-||.|+||+||.+.+..+|+.||+|.+.+ +-....++-+|+.+|-.+ .|.|++..+++..-
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfF--------------kHdNVLSaLDILQP 123 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSF--------------RHDNVLSLLDILQP 123 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhh--------------ccccHHHHHHhcCC
Confidence 4689999999999999999999999998753 223356778899999888 77777777777652
Q ss_pred ecCC-CeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRN-GTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~-~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
...+ -..+|+++|.+..+|...+.+- +.++.+.++-+..||+.||+|||+. +|+||||||.|.|++.|.
T Consensus 124 ph~dfFqEiYV~TELmQSDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA-~ILHRDIKPGNLLVNSNC------- 193 (449)
T KOG0664|consen 124 ANPSFFQELYVLTELMQSDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTA-NILHRDIKPGNLLVNSNC------- 193 (449)
T ss_pred CCchHHHHHHHHHHHHHhhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhc-chhhccCCCccEEeccCc-------
Confidence 1111 1135778888888887766543 5689999999999999999999998 999999999999997766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhHHHhcCC-CCc
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGAG-YGP 263 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~~-~~~ 263 (393)
.+|+||||+++.... +....+-|.+|+|||++.+.+ |+.
T Consensus 194 ------------------------------------vLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~ 237 (449)
T KOG0664|consen 194 ------------------------------------ILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTG 237 (449)
T ss_pred ------------------------------------eEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcC
Confidence 489999999986543 233345588999999999975 799
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
+.||||+||+|.|++..+..|...+ ...++..|.+++|....+..+-..+..+-.- .+.....+...
T Consensus 238 AvDiWSVGCIFaELLgRrILFQAq~------PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~----LR~~~k~Ps~~--- 304 (449)
T KOG0664|consen 238 AVDIWSVGCIFAELLQRKILFQAAG------PIEQLQMIIDLLGTPSQEAMKYACEGAKNHV----LRAGLRAPDTQ--- 304 (449)
T ss_pred ccceehhhHHHHHHHhhhhhhhccC------hHHHHHHHHHHhCCCcHHHHHHHhhhhHHHh----hccCCCCCCcc---
Confidence 9999999999999999999998877 6788999999999876655443333221110 01111111110
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSHY 393 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~ 393 (393)
.+ .++.-+.......++++.++|.+||.+|++..+++.|+++...+.||
T Consensus 305 vL-YtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r~ 353 (449)
T KOG0664|consen 305 RL-YKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLRF 353 (449)
T ss_pred ce-eeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccceee
Confidence 00 01111224456677999999999999999999999999999888776
No 354
>KOG1035|consensus
Probab=100.00 E-value=7.1e-36 Score=299.53 Aligned_cols=255 Identities=25% Similarity=0.350 Sum_probs=191.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+|+.++.||+||||.||+++++-+|..+|||.+... .....++.+|+.+|.++. ||||++++.
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLn--------------HpNVVRYys 544 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLN--------------HPNVVRYYS 544 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcC--------------Ccceeeeeh
Confidence 4788899999999999999999999999999988754 333456788999999994 444444444
Q ss_pred cceee------------------------------------------------------c--------------------
Q psy12288 106 DFKIY------------------------------------------------------S-------------------- 111 (393)
Q Consensus 106 ~~~~~------------------------------------------------------~-------------------- 111 (393)
.+... .
T Consensus 545 AWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~d 624 (1351)
T KOG1035|consen 545 AWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSD 624 (1351)
T ss_pred hhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccc
Confidence 33210 0
Q ss_pred ----------------------------------C-------CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHH
Q psy12288 112 ----------------------------------R-------NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIK 150 (393)
Q Consensus 112 ----------------------------------~-------~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ 150 (393)
. ....+||-||||..++++.+.+.+...-..+..+++++
T Consensus 625 edg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFr 704 (1351)
T KOG1035|consen 625 EDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFR 704 (1351)
T ss_pred ccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHH
Confidence 0 01347999999988888888776532113778899999
Q ss_pred HHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEee
Q psy12288 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230 (393)
Q Consensus 151 ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~d 230 (393)
+|+.||+|+|++ ||+||||||.||+++.+. .+||+|
T Consensus 705 eIlEGLaYIH~~-giIHRDLKP~NIFLd~~~-------------------------------------------~VKIGD 740 (1351)
T KOG1035|consen 705 EILEGLAYIHDQ-GIIHRDLKPRNIFLDSRN-------------------------------------------SVKIGD 740 (1351)
T ss_pred HHHHHHHHHHhC-ceeeccCCcceeEEcCCC-------------------------------------------Ceeecc
Confidence 999999999998 999999999999998766 399999
Q ss_pred cCcccccc---------------------CCCCCCCCCCCCchhHHHhcCC---CCchhhHHhHHHHHHHHHhCCCCCCC
Q psy12288 231 LGNACWID---------------------DHFADEIQTRQYRSVEVLIGAG---YGPAADIWSTACMAFELATGDYLFDP 286 (393)
Q Consensus 231 fg~~~~~~---------------------~~~~~~~~t~~y~aPE~~~~~~---~~~~~DiwSlG~~l~ell~g~~pf~~ 286 (393)
||++...- ...+..+||.-|+|||++.+.. |+.++|+||||++|+||+. ||..
T Consensus 741 FGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T 817 (1351)
T KOG1035|consen 741 FGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGT 817 (1351)
T ss_pred cccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCc
Confidence 99987610 1234558999999999998754 8999999999999999995 4632
Q ss_pred CCCCCCCCcHHHHHHHHHH-hCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHh
Q psy12288 287 KAGKEYSRDDDHLAHIVEL-VGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLP 365 (393)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 365 (393)
..+...-+..+ .|.+|.+ ..|..+..+.-..+|++
T Consensus 818 --------sMERa~iL~~LR~g~iP~~------------------------------------~~f~~~~~~~e~slI~~ 853 (1351)
T KOG1035|consen 818 --------SMERASILTNLRKGSIPEP------------------------------------ADFFDPEHPEEASLIRW 853 (1351)
T ss_pred --------hHHHHHHHHhcccCCCCCC------------------------------------cccccccchHHHHHHHH
Confidence 22222222222 2344442 00122333455699999
Q ss_pred ccccCCCCCcCHHHHhcCCCCC
Q psy12288 366 MLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 366 ~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
||..||.+||||.|+|++.||-
T Consensus 854 Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HhcCCCccCCCHHHHhhccCCC
Confidence 9999999999999999999986
No 355
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.1e-34 Score=266.63 Aligned_cols=248 Identities=19% Similarity=0.255 Sum_probs=191.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC----CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ----DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++|++.+.||+|+||.||+|.+.. ++..|++|.+.... .....+.+|+.+++.+ .|+|+
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ni 70 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL--------------SHQNI 70 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC--------------CCCCC
Confidence 4689999999999999999999876 35789999886432 2245567899999988 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY------KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~------~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
+++++.... .+...+++++++ ++++.+++..... ..++...+..++.|++.||+|||++ +++|+||||+
T Consensus 71 ~~~~~~~~~---~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~p~ 146 (280)
T cd05043 71 LPILHVCIE---DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR-GVIHKDIAAR 146 (280)
T ss_pred CeEEEEEec---CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCHh
Confidence 998887642 245688999998 6788888755322 3488999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCC
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTR 248 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~ 248 (393)
||+++.++ .++++|||+++...... ....++.
T Consensus 147 nil~~~~~-------------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~ 183 (280)
T cd05043 147 NCVIDEEL-------------------------------------------QVKITDNALSRDLFPMDYHCLGDNENRPV 183 (280)
T ss_pred hEEEcCCC-------------------------------------------cEEECCCCCcccccCCceEEeCCCCCcch
Confidence 99997665 49999999987543211 1233467
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
.|+|||++.+..++.++||||||+++|++++ |+.||...+.. .....+.. +..
T Consensus 184 ~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~--~~~------------------ 237 (280)
T cd05043 184 KWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF------EMAAYLKD--GYR------------------ 237 (280)
T ss_pred hccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH------HHHHHHHc--CCC------------------
Confidence 7999999998889999999999999999998 99999654321 11110000 000
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+..++..+.+++.+||..||++|||+.++++
T Consensus 238 ---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 238 ---------------------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred ---------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0011234567889999999999999999999885
No 356
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=8.3e-35 Score=263.92 Aligned_cols=242 Identities=18% Similarity=0.236 Sum_probs=183.4
Q ss_pred EEecccCceEEEEEEeCCCC----------ceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 34 RKLGWGHFSTVWLSWDLQDK----------TFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~----------~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+.||+|+||.||+|.+..++ ..+++|.+.........+.+|+.+++.+ .|+|++++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 66 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL--------------SHKHLVKL 66 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC--------------CCcchhhe
Confidence 46899999999999998776 3588887765443356778899999988 88999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. . ...++||||+ +++|.+++.... ..++...+..++.|++.||+|||++ |++|+||||+||+++.++.
T Consensus 67 ~~~~~----~-~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~ 139 (259)
T cd05037 67 YGVCV----R-DENIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDK-KLVHGNVCGKNILVARYGL 139 (259)
T ss_pred eeEEe----c-CCcEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC-CeecccCccceEEEecCcc
Confidence 98876 2 4578999999 677777776543 2588999999999999999999998 9999999999999986652
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcC--C
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA--G 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~--~ 260 (393)
. ......++|+|||++..... .....++..|+|||++.+. .
T Consensus 140 ~------------------------------------~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~ 182 (259)
T cd05037 140 N------------------------------------EGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQAS 182 (259)
T ss_pred c------------------------------------cCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCC
Confidence 0 00012499999999876543 2334567789999999876 6
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|+|++ |..||...+..+ . ........
T Consensus 183 ~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~------~-~~~~~~~~-------------------------------- 223 (259)
T cd05037 183 LTIAADKWSFGTTLLEICSNGEEPLSTLSSSE------K-ERFYQDQH-------------------------------- 223 (259)
T ss_pred cchhhHHHHHHHHHHHHHhCCCCCcccCCchh------H-HHHHhcCC--------------------------------
Confidence 8999999999999999999 577776543111 0 00000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+......+.++|.+||..+|.+|||+.++++
T Consensus 224 ----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 224 ----------RLPMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ----------CCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 011112267889999999999999999999986
No 357
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.2e-34 Score=267.02 Aligned_cols=260 Identities=21% Similarity=0.284 Sum_probs=191.0
Q ss_pred eEEEEEEecccCceEEEEEEe----CCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWD----LQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-|+++++||+|+||.||+|.. ..++..||+|.++... .....+.+|+.+++.+ .|+|+++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 70 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL--------------YHENIVK 70 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC--------------CCCCeee
Confidence 478999999999999999974 4568889999886432 2235678899999998 7899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+... +....+++|||+ +++|.+.+.+.. ..++..++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 71 ~~~~~~~~--~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~-gi~H~dlkp~Nil~~~~~ 146 (284)
T cd05079 71 YKGICTED--GGNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEH 146 (284)
T ss_pred eeeEEecC--CCCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccchheEEEcCCC
Confidence 88877632 245689999999 788888775543 3478999999999999999999998 999999999999997765
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE~ 255 (393)
.++|+|||++....... ....++..|+|||.
T Consensus 147 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~ 183 (284)
T cd05079 147 -------------------------------------------QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPEC 183 (284)
T ss_pred -------------------------------------------CEEECCCccccccccCccceeecCCCCCCccccCHHH
Confidence 49999999987654321 12345677999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
+.+..++.++||||||+++|+|+++..|+...... .....++.+.+...
T Consensus 184 ~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~-----------~~~~~~~~~~~~~~-------------------- 232 (284)
T cd05079 184 LIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL-----------FLKMIGPTHGQMTV-------------------- 232 (284)
T ss_pred hccCCCCccccchhhhhhhhhhhcCCCCCccccch-----------hhhhcccccccccH--------------------
Confidence 99888999999999999999999987665322110 00111111000000
Q ss_pred CCcchhHHHHh--hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 336 LKPWGLYQVLT--EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 336 ~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
........ .....+..++..+.+|+.+||..||.+|||++++++.
T Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 233 ---TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred ---HHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 00000000 0011123456789999999999999999999999875
No 358
>KOG1095|consensus
Probab=100.00 E-value=3.2e-35 Score=297.10 Aligned_cols=246 Identities=21% Similarity=0.269 Sum_probs=199.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc-----eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT-----FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..-++.+.||+|+||.||.|....-.. .||||.++.. ......|.+|..+|..+ +||||
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f--------------~HpNi 757 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF--------------DHPNI 757 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC--------------CCcce
Confidence 467788999999999999998765432 3899988754 34456788999999999 99999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-----YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
++++++.. .....+|++||| +|+|+.++.+.. ...++..+...++.||++|+.||+++ +.|||||-.+|
T Consensus 758 v~liGv~l----~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~-~fvHRDLAaRN 832 (1025)
T KOG1095|consen 758 VSLIGVCL----DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK-HFVHRDLAARN 832 (1025)
T ss_pred eeEEEeec----CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC-CCcCcchhhhh
Confidence 99999998 466689999999 999999998762 23488999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCC
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQ 249 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~ 249 (393)
+|++... .+|++|||+|+.+..... ....+..
T Consensus 833 CLL~~~r-------------------------------------------~VKIaDFGlArDiy~~~yyr~~~~a~lPvk 869 (1025)
T KOG1095|consen 833 CLLDERR-------------------------------------------VVKIADFGLARDIYDKDYYRKHGEAMLPVK 869 (1025)
T ss_pred eeecccC-------------------------------------------cEEEcccchhHhhhhchheeccCcccccee
Confidence 9997664 599999999995432211 1233567
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|||||.+....++.++|||||||++||+++ |..||.+.+..+ .+. .....|
T Consensus 870 Wm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~------v~~-~~~~gg--------------------- 921 (1025)
T KOG1095|consen 870 WMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE------VLL-DVLEGG--------------------- 921 (1025)
T ss_pred cCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH------HHH-HHHhCC---------------------
Confidence 999999999999999999999999999999 999998665321 111 111111
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
+.+-|..++..+.++|.+||+.+|++||++..|++
T Consensus 922 -------------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 922 -------------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred -------------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 22234677889999999999999999999999886
No 359
>KOG4250|consensus
Probab=100.00 E-value=1.4e-35 Score=283.68 Aligned_cols=275 Identities=23% Similarity=0.363 Sum_probs=200.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.-+...+.||+|+||.||+++++.+|+.||||.++... ...+..-+|+++|+++ +|+|||++++
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL--------------nh~NIVk~f~ 78 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL--------------NHPNIVKLFD 78 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc--------------Cchhhhhhcc
Confidence 34667889999999999999999999999999987643 3456677999999999 8999999988
Q ss_pred cceeec--CCCeEEEEEEeec-cccHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 106 DFKIYS--RNGTHICMVFEVM-GYNLLRLIARS-DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 106 ~~~~~~--~~~~~~~iv~e~~-~~~l~~~~~~~-~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+=.... -.....+++|||| +|+|...+.+- +..++++.+++.+...+..||.|||++ ||+||||||.||++-...
T Consensus 79 iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn-~IvHRDlKP~NIvl~~Ge 157 (732)
T KOG4250|consen 79 IEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN-GIVHRDLKPGNIVLQIGE 157 (732)
T ss_pred cCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCcEEEeecC
Confidence 765322 1145689999999 88998888542 234599999999999999999999998 999999999999885433
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhc-
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~- 258 (393)
. .....||+|||.|+.+.+ .....+||+.|.+||+...
T Consensus 158 d---------------------------------------gq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q 198 (732)
T KOG4250|consen 158 D---------------------------------------GQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQ 198 (732)
T ss_pred C---------------------------------------CceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhc
Confidence 1 122589999999998754 3556789999999999995
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
+.|+.-+|.|||||++|+++||..||.+.....- .......+.. .-|..+..... ...++ +
T Consensus 199 ~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~--~~~~~~~~~t---kkp~~v~i~~~------------~~eNg--p 259 (732)
T KOG4250|consen 199 KKYTATVDLWSFGVTLYECATGELPFIPFGGPKN--NKEIMWHIIT---KKPSGVAIGAQ------------EEENG--P 259 (732)
T ss_pred cCcCceeehhhhhhHHHHHhccCCCCCcCCCccc--cchhhhhhhc---cCCCceeEeee------------cccCC--c
Confidence 7789999999999999999999999976543310 0111111111 11111110000 00000 1
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 375 (393)
-.....++....++......+-..+..+|.++|++|.
T Consensus 260 v~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 260 VEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 1112233334445556666777888999999999998
No 360
>KOG0696|consensus
Probab=100.00 E-value=1.4e-35 Score=267.14 Aligned_cols=252 Identities=22% Similarity=0.321 Sum_probs=208.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccc----hhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA----DTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
..+|..+.+||.|+||.|-+|..+.+.+.+|||+++++.... +--..|-++|+..+ .-|.++.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~-------------kppFL~q 414 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG-------------KPPFLVQ 414 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCC-------------CCchHHH
Confidence 468999999999999999999999999999999998764332 22234555555543 4456777
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+..+|+ .-+.++.||||+ ||+|-..+..- +.+.+..+..++.+|+-||-|||++ ||++||||.+||+++.++
T Consensus 415 lHScFQ----TmDRLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~k-gIiYRDLKLDNvmLd~eG 487 (683)
T KOG0696|consen 415 LHSCFQ----TMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEG 487 (683)
T ss_pred HHHHhh----hhhheeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcC-CeeeeeccccceEeccCC
Confidence 888887 556799999999 78887777543 4588889999999999999999999 999999999999999888
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~ 258 (393)
.+|++|||.+..- +....+.+||+.|+|||++.-
T Consensus 488 -------------------------------------------HiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~Y 524 (683)
T KOG0696|consen 488 -------------------------------------------HIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAY 524 (683)
T ss_pred -------------------------------------------ceEeeecccccccccCCcceeeecCCCcccccceEEe
Confidence 4999999998743 233456789999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.+|+.++|.||+||++|||+.|++||.+.. +.+..+.|++
T Consensus 525 qPYgksvDWWa~GVLLyEmlaGQpPFdGeD------E~elF~aI~e---------------------------------- 564 (683)
T KOG0696|consen 525 QPYGKSVDWWAFGVLLYEMLAGQPPFDGED------EDELFQAIME---------------------------------- 564 (683)
T ss_pred cccccchhHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHH----------------------------------
Confidence 999999999999999999999999998877 4444444443
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH-----HHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA-----ADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~ 389 (393)
.+..+|...|.++.++++..|...|.+|+.+ +++-+||||+.+
T Consensus 565 --------hnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 565 --------HNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred --------ccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 3444667778899999999999999999964 789999999875
No 361
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.6e-34 Score=264.12 Aligned_cols=241 Identities=21% Similarity=0.263 Sum_probs=183.7
Q ss_pred EecccCceEEEEEEeCCCCc--eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 35 KLGWGHFSTVWLSWDLQDKT--FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
.||+|+||.||+|....++. .+++|.++.. ....+.+.+|+.++..++ .|+|++++++.+.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~~iv~~~~~~~-- 66 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-------------HHPNIINLLGACE-- 66 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc-------------cCCCeeeEEEEEe--
Confidence 68999999999999988775 4688877642 223456778999998884 6889999998886
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
....++++|||+ +++|.+++.... ...++...+..++.|++.||+|||+. |++|+||||+||
T Consensus 67 --~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~ni 143 (270)
T cd05047 67 --HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNI 143 (270)
T ss_pred --cCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccccceE
Confidence 556789999999 788888876432 12478889999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchh
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSV 253 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aP 253 (393)
+++.++ .++++|||++...... ......+..|+||
T Consensus 144 li~~~~-------------------------------------------~~kl~dfgl~~~~~~~~~~~~~~~~~~y~ap 180 (270)
T cd05047 144 LVGENY-------------------------------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 180 (270)
T ss_pred EEcCCC-------------------------------------------eEEECCCCCccccchhhhccCCCCccccCCh
Confidence 998766 5999999987533221 1112335679999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|++....++.++|+||||+++|+|++ |..||.+.+. ......+.. +.
T Consensus 181 E~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~------~~~~~~~~~--~~------------------------ 228 (270)
T cd05047 181 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKLPQ--GY------------------------ 228 (270)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH------HHHHHHHhC--CC------------------------
Confidence 99988889999999999999999997 9999965331 111111100 00
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..||.+|||+.+++..
T Consensus 229 ---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 229 ---------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred ---------------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 001112345678899999999999999999999864
No 362
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.5e-35 Score=266.55 Aligned_cols=243 Identities=19% Similarity=0.219 Sum_probs=177.2
Q ss_pred EecccCceEEEEEEeCCC------------------------CceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCc
Q psy12288 35 KLGWGHFSTVWLSWDLQD------------------------KTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~------------------------~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
.||+|+||.||+|....+ ...|++|++..... ....+.+|..+++.+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l-------- 73 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV-------- 73 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC--------
Confidence 589999999999975322 23588898864322 234566777788777
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.|+|++++++.+. .+...++||||+ +++|...+.. ....++...+..++.|++.||+|||++ +++||
T Consensus 74 ------~h~niv~~~~~~~----~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~ 141 (274)
T cd05076 74 ------SHIHLAFVHGVCV----RGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDK-NLVHG 141 (274)
T ss_pred ------CCCCeeeEEEEEE----eCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcC-CccCC
Confidence 8999999999876 566789999999 5565555543 334588999999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~ 248 (393)
||||+||+++.++.. ......++++|||.+..... .....++.
T Consensus 142 dlkp~Nill~~~~~~------------------------------------~~~~~~~kl~d~g~~~~~~~-~~~~~~~~ 184 (274)
T cd05076 142 NVCAKNILLARLGLA------------------------------------EGTSPFIKLSDPGVSFTALS-REERVERI 184 (274)
T ss_pred CCCcccEEEeccCcc------------------------------------cCccceeeecCCcccccccc-ccccccCC
Confidence 999999999754310 00012489999998754322 22345678
Q ss_pred CCchhHHHhc-CCCCchhhHHhHHHHHHHHH-hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 249 QYRSVEVLIG-AGYGPAADIWSTACMAFELA-TGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 249 ~y~aPE~~~~-~~~~~~~DiwSlG~~l~ell-~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
.|+|||.+.+ ..++.++|+||||+++|+++ +|..||......+ . .....
T Consensus 185 ~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------~-~~~~~---------------------- 235 (274)
T cd05076 185 PWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE------K-ERFYE---------------------- 235 (274)
T ss_pred cccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH------H-HHHHH----------------------
Confidence 8999999876 45799999999999999995 6899986543211 0 00000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+...+..+.++|.+||..+|++|||+.+++++
T Consensus 236 --------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 236 --------------------KKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred --------------------hccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 0011112233568899999999999999999999875
No 363
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.9e-34 Score=259.19 Aligned_cols=239 Identities=20% Similarity=0.289 Sum_probs=184.8
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
++||+|+||.||+|... ++..+|+|.+.... .....+.+|+.+++.+ .|+|++++.+.+.
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~~--- 62 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQY--------------DHPNIVKLIGVCT--- 62 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC--------------CCCCcCeEEEEEe---
Confidence 36899999999999754 67889999876432 1234577899999988 8999999998876
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.....++||||+ +++|.+.+.... ..+.+..+..++.|++.||.++|++ |++|+||+|+||+++.++
T Consensus 63 -~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~~~H~dl~p~nili~~~~--------- 130 (250)
T cd05085 63 -QRQPIYIVMELVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESK-NCIHRDLAARNCLVGENN--------- 130 (250)
T ss_pred -cCCccEEEEECCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccChheEEEcCCC---------
Confidence 556789999999 788887775543 3478899999999999999999998 999999999999997666
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----CCCCCCCCchhHHHhcCCCCchhh
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----DEIQTRQYRSVEVLIGAGYGPAAD 266 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~D 266 (393)
.++|+|||++........ ...++..|+|||++.+..++.++|
T Consensus 131 ----------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 176 (250)
T cd05085 131 ----------------------------------VLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESD 176 (250)
T ss_pred ----------------------------------eEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhH
Confidence 499999998865432211 123356799999998888899999
Q ss_pred HHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 267 IWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 267 iwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
+||||+++|++++ |..||..... ......+.. +.
T Consensus 177 i~slG~ll~~~~~~g~~p~~~~~~------~~~~~~~~~--~~------------------------------------- 211 (250)
T cd05085 177 VWSYGILLWETFSLGVCPYPGMTN------QQAREQVEK--GY------------------------------------- 211 (250)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHHHc--CC-------------------------------------
Confidence 9999999999998 9999965431 111111100 00
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|++||++.++++.
T Consensus 212 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 212 --RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred --CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 001123455788999999999999999999999764
No 364
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.8e-35 Score=267.26 Aligned_cols=245 Identities=16% Similarity=0.231 Sum_probs=181.9
Q ss_pred EEecccCceEEEEEEeCCCCc-------eEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKT-------FVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~-------~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.||+|+||.||+|.+..++. .+++|.+..+. ...+.+.+|..+++.+ .|+|++++++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~iv~~~~ 66 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL--------------SHKHLVLNYG 66 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC--------------CCCChhheee
Confidence 368999999999998865543 48888775432 2345677888888888 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|..++.... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++...
T Consensus 67 ~~~----~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~~ 140 (258)
T cd05078 67 VCV----CGDESIMVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK-GLTHGNVCAKNVLLIREEDRK 140 (258)
T ss_pred EEE----eCCCcEEEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEecccccc
Confidence 887 455688999999 667777765543 3588899999999999999999998 999999999999998765310
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcC-CCCc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGP 263 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~ 263 (393)
......++++|||.+..... .....++..|+|||++.+. .++.
T Consensus 141 -----------------------------------~~~~~~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~ 184 (258)
T cd05078 141 -----------------------------------TGNPPFIKLSDPGISITVLP-KEILLERIPWVPPECIENPQNLSL 184 (258)
T ss_pred -----------------------------------cCCCceEEecccccccccCC-chhccccCCccCchhccCCCCCCc
Confidence 00112489999998765432 2234568889999999874 4789
Q ss_pred hhhHHhHHHHHHHHHhCC-CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELATGD-YLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~-~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++|+||||+++|+|++|. .||..... .... ....
T Consensus 185 ~~DiwslG~~l~~l~~g~~~~~~~~~~------~~~~-~~~~-------------------------------------- 219 (258)
T cd05078 185 AADKWSFGTTLWEIFSGGDKPLSALDS------QKKL-QFYE-------------------------------------- 219 (258)
T ss_pred hhhHHHHHHHHHHHHcCCCCChhhccH------HHHH-HHHH--------------------------------------
Confidence 999999999999999984 55543221 0000 0000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....++...+..+.++|.+||+.||.+|||++++++.
T Consensus 220 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 220 ----DRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ----ccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 0111223344678899999999999999999999874
No 365
>KOG0587|consensus
Probab=100.00 E-value=7.8e-35 Score=283.74 Aligned_cols=260 Identities=23% Similarity=0.368 Sum_probs=218.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.+.|++.++||.|++|.||++.+..+++.+|+|++.......+.+..|.++|+... .|+|++.+++.
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~-------------~hpnv~~fyg~ 84 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS-------------HHPNVATFYGA 84 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc-------------CCCCcceEEEE
Confidence 46799999999999999999999999999999999988777888899999999984 89999999999
Q ss_pred ceeecC-CCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 107 FKIYSR-NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 107 ~~~~~~-~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
|....+ .++++|+|||+| +|+..+++....+..+.++.+..|++.++.|+.+||.+ .++|||||-.|||++.++
T Consensus 85 ~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n-kviHRDikG~NiLLT~e~--- 160 (953)
T KOG0587|consen 85 FIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN-KVIHRDIKGQNVLLTENA--- 160 (953)
T ss_pred EEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc-ceeeecccCceEEEeccC---
Confidence 986544 468999999999 88999999887777799999999999999999999998 999999999999999887
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcC--
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA-- 259 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~-- 259 (393)
.+||+|||.+..+.. .....+||+.|||||++...
T Consensus 161 ----------------------------------------~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~ 200 (953)
T KOG0587|consen 161 ----------------------------------------EVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDES 200 (953)
T ss_pred ----------------------------------------cEEEeeeeeeeeeecccccccCcCCCcccccceeeecccC
Confidence 399999999877653 34567899999999999754
Q ss_pred ---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 260 ---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 260 ---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.|...+|+||||++..||.-|.+|+.+.-+.. -++.+...+|+.+ .
T Consensus 201 ~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---------aLF~IpRNPPPkL-k--------------------- 249 (953)
T KOG0587|consen 201 PDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---------ALFLIPRNPPPKL-K--------------------- 249 (953)
T ss_pred CCCCcccccchhhccceeehhcCCCCCccCcchhh---------hhccCCCCCCccc-c---------------------
Confidence 36788999999999999999999996544221 1111111111111 1
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
-+..-+..|.+||..||..|-++||+..++|+|||++.
T Consensus 250 --------------rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 250 --------------RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred --------------chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 12344678999999999999999999999999999983
No 366
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.5e-34 Score=265.84 Aligned_cols=261 Identities=21% Similarity=0.283 Sum_probs=193.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCC----CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ----DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+.|++.+.||+|+||.||+|.... +++.+|+|.+..... ..+.+.+|+.+++.+ .|+|++
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l--------------~~~~i~ 69 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL--------------DHENIV 69 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC--------------CCCChh
Confidence 478899999999999999998643 478899999886544 256788999999998 788999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+.+.. ..+.+.+++|||+ ++++.+++.... ..++...+..++.|++.||++||+. |++|+||||+||+++.+
T Consensus 70 ~~~~~~~~--~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~nil~~~~ 145 (284)
T cd05038 70 KYKGVCEK--PGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESE 145 (284)
T ss_pred eEEeeeec--CCCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCC
Confidence 98887652 2356789999999 778888876543 3488999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE 254 (393)
+ .++|+|||.+....... ....++..|++||
T Consensus 146 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe 182 (284)
T cd05038 146 D-------------------------------------------LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPE 182 (284)
T ss_pred C-------------------------------------------CEEEcccccccccccCCcceeccCCCCCcccccCcH
Confidence 5 49999999987654221 1223456799999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+.+..++.++|+||||+++|+|++|..||........ ...+..+...
T Consensus 183 ~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-----------~~~~~~~~~~--------------------- 230 (284)
T cd05038 183 CLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL-----------RMIGIAQGQM--------------------- 230 (284)
T ss_pred HHccCCCCcccchHHHhhhhheeeccCCCcccccchhc-----------cccccccccc---------------------
Confidence 99988899999999999999999999998854322110 0000000000
Q ss_pred CCCcchhHHHHhh--hccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTE--KYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
........+.. ....+..++..+.+++.+||..+|.+|||+.|+++.
T Consensus 231 --~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 231 --IVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred --cHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 00000000000 011123345778999999999999999999999863
No 367
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.4e-34 Score=263.46 Aligned_cols=248 Identities=19% Similarity=0.296 Sum_probs=191.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|++.+.||+|+||.||+|+...+ .+.|++|.+..... ..+.+.+|+.+++.+ .|+|+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i 70 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL--------------SHKNV 70 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc--------------CCcce
Confidence 5799999999999999999987543 45799998765332 245688999999999 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-------KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-------~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
+++++.+. .....++|||++ +++|.+++..... ..++...+..++.|++.||+|||+. +++|+||||
T Consensus 71 v~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dlkp 145 (275)
T cd05046 71 VRLLGLCR----EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA-RFVHRDLAA 145 (275)
T ss_pred eeeEEEEC----CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc-CcccCcCcc
Confidence 99988775 556789999999 6788888765431 1488999999999999999999998 999999999
Q ss_pred CceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCC
Q psy12288 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTR 248 (393)
Q Consensus 173 ~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~ 248 (393)
+||+++.++ .++++|||++...... .....++.
T Consensus 146 ~Nili~~~~-------------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 182 (275)
T cd05046 146 RNCLVSSQR-------------------------------------------EVKVSLLSLSKDVYNSEYYKLRNALIPL 182 (275)
T ss_pred ceEEEeCCC-------------------------------------------cEEEcccccccccCcccccccCCceeEE
Confidence 999998766 3899999987643221 12234567
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
.|++||.+.+...+.++||||||+++|++++ |..||..... ...+..+.. +..+
T Consensus 183 ~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~------~~~~~~~~~--~~~~----------------- 237 (275)
T cd05046 183 RWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD------EEVLNRLQA--GKLE----------------- 237 (275)
T ss_pred eecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch------HHHHHHHHc--CCcC-----------------
Confidence 7999999988888999999999999999998 8889864331 111111100 0000
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..||.+|||+.|++..
T Consensus 238 ---------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 238 ---------------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred ---------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 00123455688899999999999999999999864
No 368
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.6e-34 Score=259.57 Aligned_cols=239 Identities=19% Similarity=0.286 Sum_probs=185.9
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
++||+|++|.||+|.+.. ++.|++|.+..... ....+.+|+.+++.+ .|++++++++.+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~~--- 62 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY--------------DHPNIVKLIGVCV--- 62 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCCCeEEEEEEEe---
Confidence 368999999999999877 89999998775432 245678899999988 8899999888776
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.....++|||++ ++++.+.+.... ..++...+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 63 -~~~~~~~v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~di~p~nili~~~~--------- 130 (251)
T cd05041 63 -QKQPIYIVMELVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK-NCIHRDLAARNCLVGENN--------- 130 (251)
T ss_pred -cCCCeEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CEehhhcCcceEEEcCCC---------
Confidence 556789999999 778887775532 3578899999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchhHHHhcCCCCchh
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++....... .....+..|+|||.+.+..++.++
T Consensus 131 ----------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~ 176 (251)
T cd05041 131 ----------------------------------VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSES 176 (251)
T ss_pred ----------------------------------cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcch
Confidence 49999999987543211 112235679999999888899999
Q ss_pred hHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 266 DIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 266 DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
|+||||+++|+|++ |..||...... .....+ ....
T Consensus 177 Di~slG~i~~~l~t~~~~p~~~~~~~------~~~~~~-~~~~------------------------------------- 212 (251)
T cd05041 177 DVWSYGILLWETFSLGDTPYPGMSNQ------QTRERI-ESGY------------------------------------- 212 (251)
T ss_pred hHHHHHHHHHHHHhccCCCCccCCHH------HHHHHH-hcCC-------------------------------------
Confidence 99999999999999 88888654311 111111 0000
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+|||+.|+++.
T Consensus 213 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 213 ---RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred ---CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 001123445688899999999999999999999863
No 369
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.3e-34 Score=262.51 Aligned_cols=245 Identities=21% Similarity=0.301 Sum_probs=190.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..+|++.+.||+|+||.||+|.+..++. .+|+|.+..... ....+.+|+.+++.+ .|+|+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i 71 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV--------------DHPHV 71 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC--------------CCCCc
Confidence 3589999999999999999999877655 589998765432 235677899999998 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. . ...+++||++ +++|.+.+.... ..+++..+..++.|++.||+|||++ +++|+||||+||+++.
T Consensus 72 ~~~~~~~~----~-~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~di~p~nil~~~ 144 (279)
T cd05057 72 VRLLGICL----S-SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEK-RLVHRDLAARNVLVKT 144 (279)
T ss_pred ceEEEEEe----c-CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CEEecccCcceEEEcC
Confidence 99998776 2 5688999999 788888876543 3488999999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVE 254 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE 254 (393)
++ .++|+|||.++....... ...++..|++||
T Consensus 145 ~~-------------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE 181 (279)
T cd05057 145 PQ-------------------------------------------HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALE 181 (279)
T ss_pred CC-------------------------------------------eEEECCCcccccccCcccceecCCCcccccccCHH
Confidence 65 499999999876532211 112356799999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+....++.++|+||||+++|++++ |..||.+... ... ...+.....
T Consensus 182 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~-~~~~~~~~~------------------------- 229 (279)
T cd05057 182 SILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA------VEI-PDLLEKGER------------------------- 229 (279)
T ss_pred HhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH------HHH-HHHHhCCCC-------------------------
Confidence 9988888999999999999999998 9999965431 111 111110000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+++.+||..||.+||++.++++
T Consensus 230 ---------------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 230 ---------------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred ---------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0112234467889999999999999999998865
No 370
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.1e-34 Score=262.90 Aligned_cols=244 Identities=19% Similarity=0.260 Sum_probs=185.5
Q ss_pred EecccCceEEEEEEeCCCC------ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 35 KLGWGHFSTVWLSWDLQDK------TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.||+|+||.||+|...... +.++||.+.... .....+.+|+.+++.+ .|++++++++.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~ 67 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF--------------NHPNIVKLLGV 67 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc--------------CCCCeeeEeee
Confidence 6899999999999876543 679999876432 2345677899999988 89999999988
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSD-----YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+. .....+++||++ +++|.+.+.... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.+
T Consensus 68 ~~----~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~ 142 (269)
T cd05044 68 CL----LNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM-HFIHRDLAARNCLVSEK 142 (269)
T ss_pred ec----CCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC-CcccCCCChheEEEecC
Confidence 76 456789999998 788888876432 23377889999999999999999998 99999999999999765
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~ 255 (393)
... ....++++|||++...... .....++..|+|||.
T Consensus 143 ~~~--------------------------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 184 (269)
T cd05044 143 GYD--------------------------------------ADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPES 184 (269)
T ss_pred CCC--------------------------------------CCcceEECCcccccccccccccccCcccCCCccccCHHH
Confidence 410 0114899999988654321 122345678999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++||||||+++|+|++ |..||...+ .......+ ....
T Consensus 185 ~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~------~~~~~~~~-~~~~--------------------------- 230 (269)
T cd05044 185 LLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN------NQEVLQHV-TAGG--------------------------- 230 (269)
T ss_pred HccCCcccchhHHHHHHHHHHHHHcCCCCCcccC------HHHHHHHH-hcCC---------------------------
Confidence 998889999999999999999998 999996443 11111111 0000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.++|.+||..+|.+||+++++++
T Consensus 231 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 231 -------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred -------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00112345678889999999999999999999875
No 371
>KOG0608|consensus
Probab=100.00 E-value=8.6e-35 Score=273.93 Aligned_cols=260 Identities=22% Similarity=0.353 Sum_probs=205.7
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
...+-..-|..++.||-|+||.|.+++...|...+|.|.+.+.. .....+..|-.+|... +.
T Consensus 623 RaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA--------------Dn 688 (1034)
T KOG0608|consen 623 RAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA--------------DN 688 (1034)
T ss_pred HhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc--------------CC
Confidence 33344567899999999999999999999999999999887542 2234456788888887 78
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+=||+++-.|+ +.+.+|.||+|+ ||++-.++++... |.++.++.++.++..|+++.|.. |.+||||||+|||
T Consensus 689 ~WVVrLyySFQ----DkdnLYFVMdYIPGGDmMSLLIrmgI--FeE~LARFYIAEltcAiesVHkm-GFIHRDiKPDNIL 761 (1034)
T KOG0608|consen 689 EWVVRLYYSFQ----DKDNLYFVMDYIPGGDMMSLLIRMGI--FEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNIL 761 (1034)
T ss_pred cceEEEEEEec----cCCceEEEEeccCCccHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhc-cceecccCccceE
Confidence 88999999998 777899999999 8999999888643 89999999999999999999987 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---C-------------C
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---D-------------H 240 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~-------------~ 240 (393)
+|.|+. +||+|||++.-+. . +
T Consensus 762 IDrdGH-------------------------------------------IKLTDFGLCTGfRWTHdskYYq~gdH~RqDS 798 (1034)
T KOG0608|consen 762 IDRDGH-------------------------------------------IKLTDFGLCTGFRWTHDSKYYQEGDHHRQDS 798 (1034)
T ss_pred EccCCc-------------------------------------------eeeeeccccccceeccccccccCCCcccccc
Confidence 999984 9999999874321 0 0
Q ss_pred -----------------------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC
Q psy12288 241 -----------------------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291 (393)
Q Consensus 241 -----------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~ 291 (393)
.-..+||+.|+|||++...+++..+|+||.||+||||+.|++||...+..+
T Consensus 799 mep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 799 MEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred CCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCc
Confidence 001278999999999999999999999999999999999999997766433
Q ss_pred CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCC
Q psy12288 292 YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQ 371 (393)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 371 (393)
... +.. .|..+ -.+......+.++.++|.++.+ ++
T Consensus 879 tq~---------------------kv~-------------------nw~~~----l~~~~~~~ls~e~~~li~kLc~-sa 913 (1034)
T KOG0608|consen 879 TQY---------------------KVI-------------------NWRNF----LHIPYQGNLSKEALDLIQKLCC-SA 913 (1034)
T ss_pred cee---------------------eee-------------------ehhhc----cccccccccCHHHHHHHHHHhc-Ch
Confidence 210 000 00000 0112234567788898887655 89
Q ss_pred CCCcC---HHHHhcCCCCCCCC
Q psy12288 372 KLRAS---AADCLRHPWLNPRR 390 (393)
Q Consensus 372 ~~Rpt---~~ell~hp~~~~~~ 390 (393)
.+|+. ++|+-.||||+++.
T Consensus 914 d~RLGkng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 914 DSRLGKNGADQVKAHPFFKGID 935 (1034)
T ss_pred hhhhcccchhhhhcCccccccc
Confidence 99994 78899999999863
No 372
>KOG0614|consensus
Probab=100.00 E-value=4.8e-36 Score=276.14 Aligned_cols=252 Identities=25% Similarity=0.331 Sum_probs=212.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+.+++..||-|+||.|=++........+|+|++++. +...+.+..|-.+|... ..+.|+++
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~--------------~s~fIvrL 485 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC--------------RSDFIVRL 485 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc--------------CchHHHHH
Confidence 4578899999999999999977766666889988753 33345667888888888 78899999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+..|. +..++|+.||-| ||.++..+..+ +.|....++.++.++++|++|||.+ ||++|||||+|.+++.++.
T Consensus 486 YrTfr----d~kyvYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k-~iIYRDLKPENllLd~~Gy 558 (732)
T KOG0614|consen 486 YRTFR----DSKYVYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRK-GIIYRDLKPENLLLDNRGY 558 (732)
T ss_pred HHHhc----cchhhhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhc-CceeccCChhheeeccCCc
Confidence 99998 788999999999 99999998776 4599999999999999999999998 9999999999999998885
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~ 260 (393)
+||.|||+|..++.. .-+.+||+.|.|||++.+.+
T Consensus 559 -------------------------------------------~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKG 595 (732)
T KOG0614|consen 559 -------------------------------------------LKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKG 595 (732)
T ss_pred -------------------------------------------eEEeehhhHHHhccCCceeeecCCcccccchhhhccC
Confidence 999999999987644 34578999999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
...++|.||||+++|||++|.+||.+.+++.. ....+..+
T Consensus 596 HD~avDyWaLGIli~ELL~G~pPFs~~dpmkt--Yn~ILkGi-------------------------------------- 635 (732)
T KOG0614|consen 596 HDRAVDYWALGILIYELLTGSPPFSGVDPMKT--YNLILKGI-------------------------------------- 635 (732)
T ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCchHHH--HHHHHhhh--------------------------------------
Confidence 99999999999999999999999987764432 11111111
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
...+||........+||+++...+|.+|+. +.++-.|-||.+.
T Consensus 636 ------d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 636 ------DKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred ------hhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 223466677788889999999999999997 8999999999874
No 373
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6.7e-34 Score=264.44 Aligned_cols=245 Identities=20% Similarity=0.272 Sum_probs=187.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|++.+.||+|+||.||+|.+..++. .||+|.+..... ....+.+|+.+++.+ .|+|++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~niv 72 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM--------------DHPHLV 72 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCCCcc
Confidence 578999999999999999999887776 468887764322 123567888888888 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. . ...+++++++ ++++.+.+.... ..++...+..++.|++.||+|||++ +++|+||||+||+++.+
T Consensus 73 ~~~~~~~----~-~~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dikp~Nill~~~ 145 (303)
T cd05110 73 RLLGVCL----S-PTIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSP 145 (303)
T ss_pred cEEEEEc----C-CCceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhc-CeeccccccceeeecCC
Confidence 9998775 2 2356889998 688888876543 3478889999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aPE~ 255 (393)
+ .+||+|||++....... ....++..|++||.
T Consensus 146 ~-------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 182 (303)
T cd05110 146 N-------------------------------------------HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 182 (303)
T ss_pred C-------------------------------------------ceEEccccccccccCcccccccCCCccccccCCHHH
Confidence 5 49999999987653221 12234678999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++||||||+++|++++ |..||.+... ............
T Consensus 183 ~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~-------------------------- 229 (303)
T cd05110 183 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-------REIPDLLEKGER-------------------------- 229 (303)
T ss_pred hccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHCCCC--------------------------
Confidence 998889999999999999999997 8899965331 111111110000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..+|++||+++++++.
T Consensus 230 --------------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 230 --------------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred --------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00112234577899999999999999999998764
No 374
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=9.3e-34 Score=258.75 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=187.5
Q ss_pred eEEEEEEecccCceEEEEEEeCC-CCceEEEEEEecccc-----------cchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQV-----------YADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~-----------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ....+..|+.++... ..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-------------~~ 67 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ-------------LR 67 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc-------------CC
Confidence 48889999999999999999888 678899998753211 112344566655542 17
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
|+|++++++.+. .+...+++|||+ ++++.+.+.. .....++...+..++.|++.||.+||+..+++|+||+|+
T Consensus 68 h~~i~~~~~~~~----~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~ 143 (269)
T cd08528 68 HPNIVRYYKTFL----ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPN 143 (269)
T ss_pred CCCeeeEEeeEc----cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHH
Confidence 899999999886 667899999999 6777776643 223458899999999999999999996338999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCc
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYR 251 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~ 251 (393)
||+++.++ .++|+|||.+...... .....++..|+
T Consensus 144 nil~~~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 180 (269)
T cd08528 144 NIMLGEDD-------------------------------------------KVTITDFGLAKQKQPESKLTSVVGTILYS 180 (269)
T ss_pred HEEECCCC-------------------------------------------cEEEecccceeecccccccccccCcccCc
Confidence 99997766 4999999998765432 23446788999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
+||.+.+..++.++|+||||+++|+|++|+.||..... ......+.. +..+.
T Consensus 181 ~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~------~~~~~~~~~--~~~~~-------------------- 232 (269)
T cd08528 181 CPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM------LSLATKIVE--AVYEP-------------------- 232 (269)
T ss_pred ChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH------HHHHHHHhh--ccCCc--------------------
Confidence 99999988899999999999999999999999964331 111111111 00000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
......+..+.++|++||..||.+||++.|+.++
T Consensus 233 ------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 233 ------------------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ------------------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 0001234678899999999999999999998765
No 375
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.3e-33 Score=257.87 Aligned_cols=244 Identities=19% Similarity=0.219 Sum_probs=176.7
Q ss_pred EEecccCceEEEEEEeCC--CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
++||+|+||.||+|.... ....+++|.+..... ....+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~nii~~~~~~~- 65 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL--------------NHPNVLQCLGQCI- 65 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC--------------CCCCcceEEEEEC-
Confidence 368999999999996543 345688887654321 123466788888887 8999999998876
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDY---KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~---~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.....++||||+ +++|.+.+..... ...+...+..++.|++.||+|||++ +++||||||+||+++.++
T Consensus 66 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~---- 137 (269)
T cd05042 66 ---ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-DFIHSDLALRNCQLTADL---- 137 (269)
T ss_pred ---CCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc-CEecccccHhheEecCCC----
Confidence 566799999999 6788888765432 2245677889999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhc--
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIG-- 258 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~-- 258 (393)
.++++|||++...... .....++..|+|||++..
T Consensus 138 ---------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 178 (269)
T cd05042 138 ---------------------------------------SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRG 178 (269)
T ss_pred ---------------------------------------cEEEeccccccccccchheeccCCCCCcccccCHHHHhhcc
Confidence 4999999988643211 122344677999999854
Q ss_pred -----CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCC-CChHHHhcCcccccccCCCCCee
Q psy12288 259 -----AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGP-IPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 259 -----~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
..++.++|||||||++|+|++ |..||.... ..+.+......... .|.
T Consensus 179 ~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~~-------------------- 232 (269)
T cd05042 179 QDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS------DEQVLKQVVREQDIKLPK-------------------- 232 (269)
T ss_pred ccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC------HHHHHHHHhhccCccCCC--------------------
Confidence 346889999999999999999 788886443 22222222111100 000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++..|+ .||.+|||++++++-
T Consensus 233 -----------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 233 -----------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred -----------------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 0112344566778888888 599999999999863
No 376
>KOG0194|consensus
Probab=100.00 E-value=1.5e-34 Score=273.78 Aligned_cols=256 Identities=18% Similarity=0.214 Sum_probs=201.0
Q ss_pred cccccCCee--CCeEEEEEEecccCceEEEEEEeCCCCc---e-EEEEEEecc----cccchhhHHHHHHHHHhcccCCC
Q psy12288 18 CPVQIGDLF--NFRYHVIRKLGWGHFSTVWLSWDLQDKT---F-VALKIVKSD----QVYADTARDEIVLLKAVGRKSNV 87 (393)
Q Consensus 18 ~~~~~~~~~--~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~-vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~ 87 (393)
.|+..+.|. .++-.+.++||+|+||.||+|.....+. . ||||..+.+ ......+-+|.++|+.+
T Consensus 145 ~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l------ 218 (474)
T KOG0194|consen 145 RPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL------ 218 (474)
T ss_pred ccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC------
Confidence 456666654 3556677999999999999998776533 3 899988742 23346678899999999
Q ss_pred CcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
+|+||++++++.. ....+++|||+| +|+|.+++.+... .++..+...++.+.+.||+|||++ +++
T Consensus 219 --------~H~NVVr~yGVa~----~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k-~~I 284 (474)
T KOG0194|consen 219 --------NHPNVVRFYGVAV----LEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK-NCI 284 (474)
T ss_pred --------CCCCEEEEEEEEc----CCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC-CCc
Confidence 9999999999877 455689999999 8899999987653 589999999999999999999998 999
Q ss_pred eccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC---C
Q psy12288 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA---D 243 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~---~ 243 (393)
||||-.+|+|++.++ .+|++|||+++....... .
T Consensus 285 HRDIAARNcL~~~~~-------------------------------------------~vKISDFGLs~~~~~~~~~~~~ 321 (474)
T KOG0194|consen 285 HRDIAARNCLYSKKG-------------------------------------------VVKISDFGLSRAGSQYVMKKFL 321 (474)
T ss_pred chhHhHHHheecCCC-------------------------------------------eEEeCccccccCCcceeecccc
Confidence 999999999998776 379999999875432111 1
Q ss_pred CCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc
Q psy12288 244 EIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322 (393)
Q Consensus 244 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~ 322 (393)
..-+..|+|||.+....|+.++|||||||++||+++ |..||++... .+..+.+..- +.
T Consensus 322 ~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~------~~v~~kI~~~-~~-------------- 380 (474)
T KOG0194|consen 322 KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN------YEVKAKIVKN-GY-------------- 380 (474)
T ss_pred ccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH------HHHHHHHHhc-Cc--------------
Confidence 124678999999999999999999999999999999 7889987662 2222222111 11
Q ss_pred ccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
+...+...+..+..++.+|+..||++|||+.++.+
T Consensus 381 -------------------------r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 381 -------------------------RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred -------------------------cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 11123456677889999999999999999988764
No 377
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.6e-33 Score=257.37 Aligned_cols=244 Identities=16% Similarity=0.179 Sum_probs=176.9
Q ss_pred EEecccCceEEEEEEeCC--CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.... ++..+|+|.+..... ....+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~~~~- 65 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL--------------QHSNLLQCLGQCT- 65 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC--------------CCCCEeeEEEEEc-
Confidence 368999999999997543 456799998765432 224567899999998 8999999988776
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSD---YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~---~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.....++||||+ +++|.+.+.... ....+...+..++.|++.|++|||+. +++|+||||+||+++.++
T Consensus 66 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dlkp~nil~~~~~---- 137 (269)
T cd05087 66 ---EVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN-NFIHSDLALRNCLLTADL---- 137 (269)
T ss_pred ---CCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCC----
Confidence 456689999999 678888775432 12345677888999999999999998 999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcC-
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGA- 259 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~- 259 (393)
.++|+|||.+...... .....++..|+|||++.+.
T Consensus 138 ---------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 178 (269)
T cd05087 138 ---------------------------------------TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVH 178 (269)
T ss_pred ---------------------------------------cEEECCccccccccCcceeecCCCcCCcccccCHhHhcccc
Confidence 4999999988643221 1123457789999998642
Q ss_pred ------CCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 260 ------GYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 260 ------~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
.++.++|+||||+++|+|++ |..||..... ......... +... ..
T Consensus 179 ~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~------~~~~~~~~~--~~~~-----------~~--------- 230 (269)
T cd05087 179 GNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD------EQVLTYTVR--EQQL-----------KL--------- 230 (269)
T ss_pred ccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh------HHHHHHHhh--cccC-----------CC---------
Confidence 35789999999999999996 9999965431 111111110 0000 00
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.........+..+.++|.+|+ .+|.+|||++||+.
T Consensus 231 --------------~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 231 --------------PKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred --------------CCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 000011234556789999998 68999999999974
No 378
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.2e-33 Score=256.86 Aligned_cols=241 Identities=20% Similarity=0.289 Sum_probs=178.2
Q ss_pred EEecccCceEEEEEEeCCC---CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+.||+|+||.||+|.+... ...||+|.+.... .....+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~~ 66 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF--------------SHPNVLSLLGICL 66 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC--------------CCCCcceEEEEee
Confidence 3689999999999986543 4579999875322 2235667788888887 8899999888554
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
. .++..+++|||+ +++|.+++.... ...+...+..++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 67 ~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk~~nili~~~~------ 135 (262)
T cd05058 67 P---SEGSPLVVLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDESF------ 135 (262)
T ss_pred c---CCCCcEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCC------
Confidence 2 344578999999 788888876543 3356778888999999999999998 999999999999997765
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHHhcCC
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||+++..... .....++..|+|||.+.+..
T Consensus 136 -------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 178 (262)
T cd05058 136 -------------------------------------TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQK 178 (262)
T ss_pred -------------------------------------cEEECCccccccccCCcceeecccccCcCCccccChhHhccCc
Confidence 4999999998754321 11234567899999998888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++||||||+++|+|++ |.+||...+. ......+. .+..
T Consensus 179 ~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~~~~~~~~--~~~~------------------------------ 220 (262)
T cd05058 179 FTTKSDVWSFGVLLWELMTRGAPPYPDVDS------FDITVYLL--QGRR------------------------------ 220 (262)
T ss_pred cchHHHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHh--cCCC------------------------------
Confidence 9999999999999999999 5666653321 11111100 0000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..+|++||++.++++.
T Consensus 221 ---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 221 ---------LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred ---------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 00112234578899999999999999999999875
No 379
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.6e-33 Score=257.66 Aligned_cols=249 Identities=18% Similarity=0.251 Sum_probs=185.9
Q ss_pred EEEEEEecccCceEEEEEEeCC---CCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQ---DKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
|++.++||+|+||.||+|.... ++..||||++..+. ...+.+.+|+.+++.+ .|+|++++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~ 66 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF--------------DHPNVIKL 66 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC--------------CCCCcceE
Confidence 6778899999999999998653 57889999887532 2234567899999988 88999999
Q ss_pred cccceeecCCC--eEEEEEEeec-cccHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 104 LNDFKIYSRNG--THICMVFEVM-GYNLLRLIARS----DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 104 ~~~~~~~~~~~--~~~~iv~e~~-~~~l~~~~~~~----~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
++.+......+ ...+++++|+ ++++...+... ....++...+..++.|++.||+|||+. |++|+||||+||+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~nil 145 (273)
T cd05074 67 IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK-NFIHRDLAARNCM 145 (273)
T ss_pred EEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccchhhEE
Confidence 98775332222 2357888988 67777665422 112478889999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCc
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYR 251 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~ 251 (393)
++.+. .++++|||+++...... ....+++.|+
T Consensus 146 i~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 182 (273)
T cd05074 146 LNENM-------------------------------------------TVCVADFGLSKKIYSGDYYRQGCASKLPVKWL 182 (273)
T ss_pred EcCCC-------------------------------------------CEEECcccccccccCCcceecCCCccCchhhc
Confidence 97665 48999999987653221 1223457899
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
+||.+.+..++.++||||||+++|+|++ |+.||..... ......+.. +.
T Consensus 183 ~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~---------------------- 232 (273)
T cd05074 183 ALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN------SEIYNYLIK--GN---------------------- 232 (273)
T ss_pred CHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH------HHHHHHHHc--CC----------------------
Confidence 9999998889999999999999999999 8899864431 111111110 00
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+||++.+++++
T Consensus 233 -----------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 233 -----------------RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred -----------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001112345678899999999999999999999875
No 380
>KOG4257|consensus
Probab=100.00 E-value=2.2e-34 Score=270.89 Aligned_cols=242 Identities=18% Similarity=0.275 Sum_probs=198.5
Q ss_pred EEEEEEecccCceEEEEEEeCCC--Cc--eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQD--KT--FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~--~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
-++.+.||.|-||.||.|..... |+ -||||..+.+ ....+.+..|..+|+.+ +||||+++
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf--------------dHphIikL 456 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF--------------DHPHIIKL 456 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC--------------CCcchhhe
Confidence 34567899999999999976544 22 4999998864 44578899999999999 99999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++++. ....|||||.+ -|.|..++...+ .+++......++.||+.||+|||+. +.|||||-.+|||+..+.
T Consensus 457 IGv~~-----e~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSk-rfVHRDIAaRNiLVsSp~- 528 (974)
T KOG4257|consen 457 IGVCV-----EQPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESK-RFVHRDIAARNILVSSPQ- 528 (974)
T ss_pred eeeee-----ccceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhh-chhhhhhhhhheeecCcc-
Confidence 99996 44599999999 788888887654 4588899999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----CCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----DEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~t~~y~aPE~~~~ 258 (393)
++||+|||+++....... ...-+.-|||||.+.-
T Consensus 529 ------------------------------------------CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINf 566 (974)
T KOG4257|consen 529 ------------------------------------------CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINF 566 (974)
T ss_pred ------------------------------------------eeeecccchhhhccccchhhccccccceeecCccccch
Confidence 699999999998764422 2233667999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.+++.++|||.|||.+||++. |.-||.+....+.. |.+ .+
T Consensus 567 RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI-------------~~i--------En------------------ 607 (974)
T KOG4257|consen 567 RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI-------------GHI--------EN------------------ 607 (974)
T ss_pred hcccchhhHHHHHHHHHHHHHhcCCccccccccceE-------------EEe--------cC------------------
Confidence 999999999999999999987 99999877644321 110 00
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.++.+.|..+++.+..|+.+||.+||.+||++.|+..
T Consensus 608 --------GeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 608 --------GERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred --------CCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 1234567889999999999999999999999988753
No 381
>KOG4278|consensus
Probab=100.00 E-value=3.7e-34 Score=269.16 Aligned_cols=244 Identities=19% Similarity=0.276 Sum_probs=205.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+-.+..+||-|.||.||.|.++.-.-.||||.++.+....+.|..|..+|+.+ .|+|++++++++.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKei--------------kHpNLVqLLGVCT 333 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI--------------KHPNLVQLLGVCT 333 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhh--------------cCccHHHHhhhhc
Confidence 45567899999999999999998888899999999999999999999999999 8999999999998
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
....+|||+||| .|+|++++.+.+..-++.-....++.||..|++||..+ +.+||||-.+|.|+..+.
T Consensus 334 ----~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-nFIHRDLAARNCLVgEnh------ 402 (1157)
T KOG4278|consen 334 ----HEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENH------ 402 (1157)
T ss_pred ----cCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhccccccc------
Confidence 555699999999 89999999988766677778889999999999999998 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCC---CCCCchhHHHhcCCCCc
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQ---TRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~---t~~y~aPE~~~~~~~~~ 263 (393)
.+|+.|||+++.+... .....| +.-|.|||.+.-+.++.
T Consensus 403 -------------------------------------iVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSi 445 (1157)
T KOG4278|consen 403 -------------------------------------IVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI 445 (1157)
T ss_pred -------------------------------------eEEeeccchhhhhcCCceecccCccCcccccCccccccccccc
Confidence 5999999999977433 222333 56799999999999999
Q ss_pred hhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++|||+|||++||+.| |-.||++.. +...+.++ .+.+++-
T Consensus 446 KSDVWAFGVLLWEIATYGMsPYPGid----------lSqVY~LL-----------EkgyRM~------------------ 486 (1157)
T KOG4278|consen 446 KSDVWAFGVLLWEIATYGMSPYPGID----------LSQVYGLL-----------EKGYRMD------------------ 486 (1157)
T ss_pred chhhHHHHHHHHHHHhcCCCCCCCcc----------HHHHHHHH-----------hcccccc------------------
Confidence 9999999999999999 889997654 11222211 1122221
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 381 (393)
-+.++++.+.+||+.||+|.|.+||++.|+-
T Consensus 487 --------~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 487 --------GPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred --------CCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 2367888999999999999999999998864
No 382
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.5e-32 Score=250.86 Aligned_cols=243 Identities=16% Similarity=0.236 Sum_probs=175.0
Q ss_pred EecccCceEEEEEEeCCC--CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 35 KLGWGHFSTVWLSWDLQD--KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
.||+|+||.||+|....+ ...+++|.+.... ...+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~~iv~~~~~~~-- 65 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL--------------QHPNILQCLGQCV-- 65 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc--------------CCcchhheEEEec--
Confidence 589999999999975443 2346677665432 2345677888888877 8999999999887
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.....++||||+ +++|.+++.... ...+....+..++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 66 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nil~~~~~------ 136 (268)
T cd05086 66 --EAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH-NFLHSDLALRNCFLTSDL------ 136 (268)
T ss_pred --CCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CeeccCCccceEEEcCCc------
Confidence 556789999999 678888876532 12356677889999999999999998 999999999999997665
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchhHHHhc----
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSVEVLIG---- 258 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~---- 258 (393)
.++|+|||++..... ......++..|+|||++..
T Consensus 137 -------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 179 (268)
T cd05086 137 -------------------------------------TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGG 179 (268)
T ss_pred -------------------------------------cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCc
Confidence 499999998754211 1223456889999999853
Q ss_pred ---CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 259 ---AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 259 ---~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
..++.++||||||+++|+|++ |..||...+ ..+.+..+..-... ..+.
T Consensus 180 ~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~~~-------------~~~~--------- 231 (268)
T cd05086 180 LITAEQTKPSNVWALGVTLWELFENAAQPYSHLS------DREVLNHVIKDQQV-------------KLFK--------- 231 (268)
T ss_pred cccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHhhccc-------------ccCC---------
Confidence 235789999999999999997 567875433 22222222110000 0000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+....+..+.+++..|| .+|.+||+++++++
T Consensus 232 --------------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 232 --------------PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred --------------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 0112234567788999999 68999999999975
No 383
>KOG2052|consensus
Probab=100.00 E-value=5.6e-33 Score=252.68 Aligned_cols=266 Identities=22% Similarity=0.243 Sum_probs=208.3
Q ss_pred CCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 14 PGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
.|+-.|+-++.+++.+-++.+.||+|.||.||+|.++ |+.||||++... ......+|.++.+.+.
T Consensus 197 SGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr--dE~SWfrEtEIYqTvm----------- 261 (513)
T KOG2052|consen 197 SGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR--DERSWFRETEIYQTVM----------- 261 (513)
T ss_pred CCCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEeccc--chhhhhhHHHHHHHHH-----------
Confidence 5777889999999999999999999999999999774 889999999864 3577889999988873
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC-------Ce
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC-------RI 165 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~-------~i 165 (393)
..|+||+.+++.-......-.++|+|++|- .|+|++++.+. +++.+...+++..++.||++||... .|
T Consensus 262 -LRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaI 337 (513)
T KOG2052|consen 262 -LRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAI 337 (513)
T ss_pred -hccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchh
Confidence 289999999998876666678999999998 89999999874 4899999999999999999999743 49
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------ 239 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------ 239 (393)
.|||||..||||..|+ ++-++|+|+|.....
T Consensus 338 AHRDlKSKNILVKkn~-------------------------------------------~C~IADLGLAv~h~~~t~~id 374 (513)
T KOG2052|consen 338 AHRDLKSKNILVKKNG-------------------------------------------TCCIADLGLAVRHDSDTDTID 374 (513)
T ss_pred hccccccccEEEccCC-------------------------------------------cEEEeeceeeEEecccCCccc
Confidence 9999999999998877 489999999876532
Q ss_pred -CCCCCCCCCCCchhHHHhcCC------CCchhhHHhHHHHHHHHHhC----------CCCCCCCCCCCCCCcHHHHHHH
Q psy12288 240 -HFADEIQTRQYRSVEVLIGAG------YGPAADIWSTACMAFELATG----------DYLFDPKAGKEYSRDDDHLAHI 302 (393)
Q Consensus 240 -~~~~~~~t~~y~aPE~~~~~~------~~~~~DiwSlG~~l~ell~g----------~~pf~~~~~~~~~~~~~~~~~~ 302 (393)
.....+||..|||||++...- .-..+||||||.++||++.. .+||.+..+.+.. .+.+...
T Consensus 375 i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs--~eeMrkV 452 (513)
T KOG2052|consen 375 IPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS--FEEMRKV 452 (513)
T ss_pred CCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC--HHHHhcc
Confidence 345679999999999997642 13469999999999999764 4577655443321 1111111
Q ss_pred HH---HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHH
Q psy12288 303 VE---LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379 (393)
Q Consensus 303 ~~---~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 379 (393)
+- ++..+|.. | .+.+.-..+.++|+.||..||.-|.||-.
T Consensus 453 VCv~~~RP~ipnr--------------------------W-----------~s~~~l~~m~klMkeCW~~Np~aRltALr 495 (513)
T KOG2052|consen 453 VCVQKLRPNIPNR--------------------------W-----------KSDPALRVMAKLMKECWYANPAARLTALR 495 (513)
T ss_pred eeecccCCCCCcc--------------------------c-----------ccCHHHHHHHHHHHHhhcCCchhhhHHHH
Confidence 11 11111111 1 12455677889999999999999999854
Q ss_pred H
Q psy12288 380 C 380 (393)
Q Consensus 380 l 380 (393)
+
T Consensus 496 i 496 (513)
T KOG2052|consen 496 I 496 (513)
T ss_pred H
Confidence 4
No 384
>KOG0199|consensus
Probab=100.00 E-value=9.4e-34 Score=269.62 Aligned_cols=246 Identities=20% Similarity=0.225 Sum_probs=202.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCC-Cc--eEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQD-KT--FVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~--~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++-++.++||+|.||+|++|.+... |+ .||||.+..... ....|.+|+.+|..+ .|+|+++
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L--------------~H~hliR 175 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL--------------QHPHLIR 175 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc--------------cCcceeE
Confidence 4667889999999999999987764 33 589999875432 467899999999999 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++++.. +...-+|||++ .|+|++.+.+.....|.....+.++.||+.|+.||-.+ ++|||||-.+|+++....
T Consensus 176 LyGvVl-----~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-rlvHRDLAARNlllaspr 249 (1039)
T KOG0199|consen 176 LYGVVL-----DQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-RLVHRDLAARNLLLASPR 249 (1039)
T ss_pred Eeeeec-----cchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhhheecccc
Confidence 999886 24467999999 89999998876666789999999999999999999999 999999999999996543
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCC------CCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI------QTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~------~t~~y~aPE~ 255 (393)
.+|++|||+.+.++.....++ -...|.|||.
T Consensus 250 -------------------------------------------tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEs 286 (1039)
T KOG0199|consen 250 -------------------------------------------TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPES 286 (1039)
T ss_pred -------------------------------------------eeeeecccceeccCCCCcceEecCCCcCcccccCHhH
Confidence 599999999998876544332 2457999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+....++.++|+|++||++|||++ |+-||.+.. ....+..+.+
T Consensus 287 Lrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~------g~qIL~~iD~------------------------------ 330 (1039)
T KOG0199|consen 287 LRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR------GIQILKNIDA------------------------------ 330 (1039)
T ss_pred hccccccccchhhhhhhhHHhhhccCCCCCCCCC------HHHHHHhccc------------------------------
Confidence 999999999999999999999999 899998776 2223332221
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.++++-+..++..+++++.+||..+|++|||+..|.+.
T Consensus 331 -----------~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 331 -----------GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred -----------cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 12223346789999999999999999999999988754
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.6e-32 Score=265.48 Aligned_cols=277 Identities=21% Similarity=0.252 Sum_probs=181.2
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCC----------------CCceEEEEEEecccc-cc--------------hhhHH
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQ----------------DKTFVALKIVKSDQV-YA--------------DTARD 73 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~~~-~~--------------~~~~~ 73 (393)
+-.++|++.++||+|+||.||+|.... .++.||||.+..... .. +....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 346799999999999999999997532 345799998864321 11 22233
Q ss_pred HHHHHHHhcccCCCCcccccCcccccceeccccceeecC----CCeEEEEEEeec-cccHHHHHHhcC------------
Q psy12288 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR----NGTHICMVFEVM-GYNLLRLIARSD------------ 136 (393)
Q Consensus 74 E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~iv~e~~-~~~l~~~~~~~~------------ 136 (393)
|+.++..+.+.+. .+.+++++++.+..... ..+..++||||+ +++|.+++....
T Consensus 222 E~~~l~~l~~~~l---------~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~ 292 (507)
T PLN03224 222 EAYMCAKIKRNPI---------AAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMM 292 (507)
T ss_pred HHHHHHHhhcccc---------hhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHh
Confidence 5556666644332 23445566665543211 234689999999 778877765321
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCC
Q psy12288 137 ----------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206 (393)
Q Consensus 137 ----------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (393)
...++...++.++.|++.||.|||+. +++||||||+||+++.++
T Consensus 293 ~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~-~ivHrDLKp~NILl~~~~------------------------- 346 (507)
T PLN03224 293 AGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRI-GIVHRDIKPENLLVTVDG------------------------- 346 (507)
T ss_pred cCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCchHhEEECCCC-------------------------
Confidence 01234567888999999999999998 999999999999998765
Q ss_pred CCCCCCCCCCCCcccccceEEEeecCccccccCC--C--CCCCCCCCCchhHHHhcCC--------------------C-
Q psy12288 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDH--F--ADEIQTRQYRSVEVLIGAG--------------------Y- 261 (393)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~--~~~~~t~~y~aPE~~~~~~--------------------~- 261 (393)
.++|+|||++...... . ....+|+.|++||.+.... +
T Consensus 347 ------------------~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg 408 (507)
T PLN03224 347 ------------------QVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYG 408 (507)
T ss_pred ------------------cEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcC
Confidence 4999999998654321 1 1223478999999986432 1
Q ss_pred -CchhhHHhHHHHHHHHHhCCC-CCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 262 -GPAADIWSTACMAFELATGDY-LFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 262 -~~~~DiwSlG~~l~ell~g~~-pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
....|+||+||++++|+++.. ||....... .........-.. +..
T Consensus 409 ~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~---------~~~~~~~~~~~~-~r~----------------------- 455 (507)
T PLN03224 409 RPDLFDSYTAGVLLMQMCVPELRPVANIRLFN---------TELRQYDNDLNR-WRM----------------------- 455 (507)
T ss_pred CCCccchhhHHHHHHHHHhCCCCCccchhhhh---------hHHhhccchHHH-HHh-----------------------
Confidence 234799999999999999875 664322100 000000000000 000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCC---CCCcCHHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQ---KLRASAADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP---~~Rpt~~ell~hp~~~~~ 389 (393)
.......+...+..+....||+.+||+.+| .+|+|++|+|+||||...
T Consensus 456 --~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~ 506 (507)
T PLN03224 456 --YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPE 506 (507)
T ss_pred --hcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCC
Confidence 000001111224567888999999999876 689999999999999764
No 386
>KOG0695|consensus
Probab=100.00 E-value=3.8e-33 Score=245.46 Aligned_cols=257 Identities=22% Similarity=0.345 Sum_probs=207.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccch----hhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD----TARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|+++++||+|+|+.|-+++...|.+.+|+|++++.-...+ =++.|-.+....+ ++|.++-+
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as-------------n~pflvgl 316 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-------------NNPFLVGL 316 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc-------------CCCeEEeh
Confidence 589999999999999999999999999999999886433222 2344555554442 78889999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
..+|+ ....++.|.||. ||+|--.+... ..++++.++.+...|+.||.|||++ ||+.||||.+|+|++..+
T Consensus 317 hscfq----tesrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~r-giiyrdlkldnvlldaeg- 388 (593)
T KOG0695|consen 317 HSCFQ----TESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHER-GIIYRDLKLDNVLLDAEG- 388 (593)
T ss_pred hhhhc----ccceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhc-CeeeeeccccceEEccCC-
Confidence 99998 667799999999 78877777665 3499999999999999999999999 999999999999999887
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~~ 259 (393)
.+||+|+|.++.- +...++.+||+.|.|||++.+.
T Consensus 389 ------------------------------------------hikltdygmcke~l~~gd~tstfcgtpnyiapeilrge 426 (593)
T KOG0695|consen 389 ------------------------------------------HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE 426 (593)
T ss_pred ------------------------------------------ceeecccchhhcCCCCCcccccccCCCcccchhhhccc
Confidence 4999999988643 3456678999999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC--CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKE--YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.|+.++|.|+|||+++||+.|+.||....-.. .-.+.
T Consensus 427 eygfsvdwwalgvlmfemmagrspfdivgm~n~d~nted----------------------------------------- 465 (593)
T KOG0695|consen 427 EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTED----------------------------------------- 465 (593)
T ss_pred ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhH-----------------------------------------
Confidence 99999999999999999999999996432111 10011
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC------HHHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS------AADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~ell~hp~~~~~ 389 (393)
.-.+.++..-+..|...+..+..+++..|+.||.+|.. +.++-.|+||+.+
T Consensus 466 -ylfqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 466 -YLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred -HHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 11233444445556666777788999999999999975 6899999999865
No 387
>KOG0196|consensus
Probab=100.00 E-value=1.4e-33 Score=271.52 Aligned_cols=245 Identities=17% Similarity=0.267 Sum_probs=203.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.-+|.++||.|.||.|++|+.+..++ .||||.++.. ......|..|..+|-++ +||||+++
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF--------------dHPNIIrL 695 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF--------------DHPNIIRL 695 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC--------------CCCcEEEE
Confidence 45688899999999999999887764 5999999854 33455678899999988 99999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.++.. ....+-||+||| +|+|-.++.... +.|+..+...+.+.|+.|++||-+. ++|||||-.+|||++.+-
T Consensus 696 EGVVT----ks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm-~YVHRDLAARNILVNsnL- 768 (996)
T KOG0196|consen 696 EGVVT----KSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDM-NYVHRDLAARNILVNSNL- 768 (996)
T ss_pred EEEEe----cCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhc-Cchhhhhhhhheeeccce-
Confidence 99987 666788999999 777777776655 4499999999999999999999997 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCC------CCCCCCchhHHH
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE------IQTRQYRSVEVL 256 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~------~~t~~y~aPE~~ 256 (393)
.+|++|||+++.+.+..... --+..|.|||.+
T Consensus 769 ------------------------------------------vCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAI 806 (996)
T KOG0196|consen 769 ------------------------------------------VCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAI 806 (996)
T ss_pred ------------------------------------------EEEeccccceeecccCCCccccccCCccceeecChhHh
Confidence 59999999999774332211 124679999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.-..++.++||||+|++|||.++ |+.|+.+.+ ..+.+..+.+-...+|
T Consensus 807 a~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS------NQdVIkaIe~gyRLPp------------------------- 855 (996)
T KOG0196|consen 807 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS------NQDVIKAIEQGYRLPP------------------------- 855 (996)
T ss_pred hhcccCchhhccccceEEEEecccCCCcccccc------hHHHHHHHHhccCCCC-------------------------
Confidence 99999999999999999999887 999999887 4555555555333322
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
|-+++..+.+||..||+.|-..||++.||+.+
T Consensus 856 ----------------PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 856 ----------------PMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred ----------------CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 35788999999999999999999999999865
No 388
>KOG1151|consensus
Probab=100.00 E-value=2.5e-34 Score=261.11 Aligned_cols=264 Identities=25% Similarity=0.390 Sum_probs=200.3
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--------chhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--------ADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
+++++|-++..||+|||+.||+|++....+.||+|+-..+... ....-+|..+.+.+ +
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL--------------D 525 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL--------------D 525 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc--------------C
Confidence 4678999999999999999999999999999999986543222 23345677788887 9
Q ss_pred cccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC-CeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC-RIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~-~i~H~dlkp~NI 175 (393)
|+.||++++.|.+ +...+|-|+|||.|+-+++..+.. ..+++.+++.|+.||+.||.||.+.. .|+|-||||.||
T Consensus 526 HpRIVKlYDyfsl---DtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNI 601 (775)
T KOG1151|consen 526 HPRIVKLYDYFSL---DTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNI 601 (775)
T ss_pred cceeeeeeeeeee---ccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccE
Confidence 9999999999974 556789999999666666655543 44899999999999999999999852 499999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEI 245 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~ 245 (393)
|+-.... .+-+|++|||++..+... .+...
T Consensus 602 LLv~Gta----------------------------------------cGeIKITDFGLSKIMdddSy~~vdGmeLTSQgA 641 (775)
T KOG1151|consen 602 LLVNGTA----------------------------------------CGEIKITDFGLSKIMDDDSYNSVDGMELTSQGA 641 (775)
T ss_pred EEecCcc----------------------------------------cceeEeeecchhhhccCCccCcccceeeecccC
Confidence 9843321 224999999999876432 22347
Q ss_pred CCCCCchhHHHhcC----CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 246 QTRQYRSVEVLIGA----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 246 ~t~~y~aPE~~~~~----~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
||.+|.+||.+.-. ..+.++||||+|||||.++-|+-||...... .+.+..--. +.
T Consensus 642 GTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ-----QdILqeNTI-lk-------------- 701 (775)
T KOG1151|consen 642 GTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ-----QDILQENTI-LK-------------- 701 (775)
T ss_pred ceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH-----HHHHhhhch-hc--------------
Confidence 89999999998654 2588999999999999999999999543211 111110000 00
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+. .+ -++--.-++.++.+||++||.+.-++|..+.++..||||..
T Consensus 702 --------------At-----EV---qFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 702 --------------AT-----EV---QFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred --------------ce-----ec---cCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 00 00 00111345678889999999999999999999999999975
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.7e-31 Score=238.85 Aligned_cols=239 Identities=29% Similarity=0.499 Sum_probs=189.0
Q ss_pred CceEEEEEEeCCCCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEE
Q psy12288 40 HFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHI 117 (393)
Q Consensus 40 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 117 (393)
+||.||+|.+..+++.+++|++...... .+.+.+|+..++.+ .|++++++.+.+. .....
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l--------------~~~~i~~~~~~~~----~~~~~ 62 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL--------------KHPNIVRLYDVFE----DEDKL 62 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC--------------CCCcHHHHHhhee----eCCEE
Confidence 5899999999988999999998754322 47788999999998 7889999988887 45779
Q ss_pred EEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccc
Q psy12288 118 CMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196 (393)
Q Consensus 118 ~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~ 196 (393)
++++|++++ +|...+.... .++...+..++.+++.++.+||+. +++|+||+|+||+++.++
T Consensus 63 ~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~i~~~ni~~~~~~--------------- 124 (244)
T smart00220 63 YLVMEYCDGGDLFDLLKKRG--RLSEDEARFYARQILSALEYLHSN-GIIHRDLKPENILLDEDG--------------- 124 (244)
T ss_pred EEEEeCCCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHc-CeecCCcCHHHeEECCCC---------------
Confidence 999999954 8888876543 278899999999999999999998 999999999999998765
Q ss_pred cCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHH
Q psy12288 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMA 274 (393)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l 274 (393)
.++++|||.+..... ......++..|++||...+..++.++|+||||+++
T Consensus 125 ----------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l 176 (244)
T smart00220 125 ----------------------------HVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVIL 176 (244)
T ss_pred ----------------------------cEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHH
Confidence 499999999876644 34455678899999999988889999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChh
Q psy12288 275 FELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKA 354 (393)
Q Consensus 275 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (393)
+++++|..||.... .. ..+........... ......
T Consensus 177 ~~l~~~~~p~~~~~------~~---~~~~~~~~~~~~~~-----------------------------------~~~~~~ 212 (244)
T smart00220 177 YELLTGKPPFPGDD------QL---LELFKKIGKPKPPF-----------------------------------PPPEWK 212 (244)
T ss_pred HHHHhCCCCCCCCC------cH---HHHHHHHhccCCCC-----------------------------------cccccc
Confidence 99999999996432 11 11111111000000 000011
Q ss_pred hHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 355 EASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 355 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.+..+.+++.+||..+|.+||++.++++||||
T Consensus 213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 213 ISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred CCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 55688899999999999999999999999997
No 390
>KOG1027|consensus
Probab=99.98 E-value=1.9e-33 Score=272.83 Aligned_cols=250 Identities=26% Similarity=0.336 Sum_probs=188.7
Q ss_pred EEEEecccCce-EEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 32 VIRKLGWGHFS-TVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 32 ~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
-.+++|.|+.| .||+|.. .++.||||.+-.+. ....++|+..|+.-. .|+||++.++.=.
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~--~~~A~rEi~lL~eSD-------------~H~NviRyyc~E~-- 573 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEF--FDFAQREIQLLQESD-------------EHPNVIRYYCSEQ-- 573 (903)
T ss_pred cHHHcccCCCCcEEEEEee--CCceehHHHHhhHh--HHHHHHHHHHHHhcc-------------CCCceEEEEeecc--
Confidence 34578899887 5899955 57799999876532 456789999999873 8999999887655
Q ss_pred cCCCeEEEEEEeeccccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 111 SRNGTHICMVFEVMGYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 111 ~~~~~~~~iv~e~~~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
+..+.||..|.|..+|.+++... ..........+.++.|+++||++||+- +||||||||.|||++....
T Consensus 574 --d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl-~iVHRDLkPQNILI~~~~~------ 644 (903)
T KOG1027|consen 574 --DRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL-KIVHRDLKPQNILISVPSA------ 644 (903)
T ss_pred --CCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc-ccccccCCCceEEEEccCC------
Confidence 78899999999999999999763 111112244578899999999999984 9999999999999976431
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhcCCCC
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
....+++|+|||++..+... .....||-+|+|||++....-+
T Consensus 645 --------------------------------~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~ 692 (903)
T KOG1027|consen 645 --------------------------------DGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKT 692 (903)
T ss_pred --------------------------------CcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccC
Confidence 11347999999999887532 3445789999999999998888
Q ss_pred chhhHHhHHHHHHHHHhC-CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELATG-DYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++||+||||++|..++| ..||.+.-.. ....+.....
T Consensus 693 ~avDiFslGCvfyYvltgG~HpFGd~~~R----~~NIl~~~~~------------------------------------- 731 (903)
T KOG1027|consen 693 QAVDIFSLGCVFYYVLTGGSHPFGDSLER----QANILTGNYT------------------------------------- 731 (903)
T ss_pred cccchhhcCceEEEEecCCccCCCchHHh----hhhhhcCccc-------------------------------------
Confidence 999999999999999885 8999543211 1111110000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
...+.......+.+||.+|++.+|..||+|.++|.||+|=+
T Consensus 732 ------L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 732 ------LVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred ------eeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence 01111122227789999999999999999999999999954
No 391
>KOG1006|consensus
Probab=99.98 E-value=1.2e-33 Score=241.38 Aligned_cols=258 Identities=20% Similarity=0.306 Sum_probs=199.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+-+-+..||.|+||.|++-.++.+|+..|||.+..+. ....++..|.....+- ..+++|+++++.
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks-------------~~cp~IVkfyGa 131 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKS-------------SNCPNIVKFYGA 131 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhh-------------cCCcHHHHHhhh
Confidence 3444678999999999999999999999999987543 3345566777654443 289999999999
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIAR---SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~---~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.. +.+-.||.||+|..++-.+... -....+++..+-.|......||.||-+...|+|||+||+|||++..+
T Consensus 132 ~F----~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G-- 205 (361)
T KOG1006|consen 132 LF----SEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG-- 205 (361)
T ss_pred hh----cCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC--
Confidence 87 5666999999997766544321 11234788888888888899999999988999999999999998877
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcC--
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA-- 259 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~-- 259 (393)
.+||||||.+-.+..+ .+..+|-..|||||.+...
T Consensus 206 -----------------------------------------~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~ 244 (361)
T KOG1006|consen 206 -----------------------------------------DVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDK 244 (361)
T ss_pred -----------------------------------------CEeeecccchHhHHHHHHhhhccCCccccChhccCCccC
Confidence 4999999998766543 3455778899999998753
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
+|.-.+|+||||+++||++||..|++..+. .+.++-. +.|.+|.-....
T Consensus 245 gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--------vfeql~~Vv~gdpp~l~~~~---------------------- 294 (361)
T KOG1006|consen 245 GYDIRSDVWSLGITLYEVATGNFPYRKWDS--------VFEQLCQVVIGDPPILLFDK---------------------- 294 (361)
T ss_pred CcchhhhhhhhcceEeeeecCCCCcchHHH--------HHHHHHHHHcCCCCeecCcc----------------------
Confidence 588999999999999999999999976542 3333333 334443311100
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
-.-..+..+.+||.-||..|-.+||...+++++||++.
T Consensus 295 ------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 295 ------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM 332 (361)
T ss_pred ------------cccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence 00235678899999999999999999999999999874
No 392
>KOG1094|consensus
Probab=99.98 E-value=1.8e-32 Score=256.41 Aligned_cols=257 Identities=20% Similarity=0.300 Sum_probs=198.7
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+.-.++-.++++||+|-||.|-+|+-. .+..||+|+++.... .+..+.+|+.+|.++ .||||+
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL--------------khPNIv 598 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRL--------------KHPNIV 598 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhcc--------------CCCCee
Confidence 344567789999999999999999654 368899999985432 246789999999999 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++++. .+..+++|+||+ .|+|..++.+........+...+|+.||+.|++||-+- ++||||+-++|+|++.+
T Consensus 599 eLvGVC~----~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~-nfVHrd~a~rNcLv~~e 673 (807)
T KOG1094|consen 599 ELLGVCV----QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL-NFVHRDLATRNCLVDGE 673 (807)
T ss_pred EEEeeee----cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh-chhhccccccceeecCc
Confidence 9999988 566799999999 89999999887544445556677999999999999985 99999999999999988
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE~ 255 (393)
. ++|++|||.++.+-.-.. ..+.+..|||+|.
T Consensus 674 ~-------------------------------------------~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEs 710 (807)
T KOG1094|consen 674 F-------------------------------------------TIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWES 710 (807)
T ss_pred c-------------------------------------------cEEecCcccccccccCCceeeecceeeeeeehhHHH
Confidence 7 499999999986532222 2245789999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHH--hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 256 LIGAGYGPAADIWSTACMAFELA--TGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell--~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+..+++++++|+|+||+++||++ +.+-||...+. ..+.+..|.+ +...+.
T Consensus 711 illgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~----------e~vven~~~~--------------~~~~~~---- 762 (807)
T KOG1094|consen 711 ILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD----------EQVVENAGEF--------------FRDQGR---- 762 (807)
T ss_pred HHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH----------HHHHHhhhhh--------------cCCCCc----
Confidence 99999999999999999999984 57788854441 1222222211 000000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+....-|.-++..++++|.+||..|-++||+++++..+
T Consensus 763 ------------~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 763 ------------QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred ------------ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 00111234566788899999999999999999998654
No 393
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=4.5e-31 Score=281.81 Aligned_cols=253 Identities=14% Similarity=0.178 Sum_probs=181.8
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
.|+..++||+|+||.||+|.+..++..||+|.+.... .....|+..++.+ .|+||+++++.+.
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~l~~l--------------~HpnIv~~~~~~~ 753 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN---SIPSSEIADMGKL--------------QHPNIVKLIGLCR 753 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc---cccHHHHHHHhhC--------------CCCCcceEEEEEE
Confidence 5667789999999999999999999999999886432 2234567788877 8999999999987
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhh---hcCCeeeccCCCCceEEeechhHH
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLH---TQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH---~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.....++||||+ +++|.+.+.. +++..+..++.|++.|++||| +. +++||||||+||+++.+..
T Consensus 754 ----~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiH~dlkp~Nil~~~~~~-- 821 (968)
T PLN00113 754 ----SEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGKDE-- 821 (968)
T ss_pred ----cCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCC-CeecCCCCHHhEEECCCCc--
Confidence 456689999999 7888888742 778899999999999999999 55 8999999999999976652
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++. ++....... .....+|..|+|||++.+..++.+
T Consensus 822 -----------------------------------------~~~~-~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~ 858 (968)
T PLN00113 822 -----------------------------------------PHLR-LSLPGLLCT-DTKCFISSAYVAPETRETKDITEK 858 (968)
T ss_pred -----------------------------------------eEEE-ecccccccc-CCCccccccccCcccccCCCCCcc
Confidence 3332 443322111 123367899999999998889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|||++|+.||........ ...... ......... ....+ ..
T Consensus 859 sDv~S~Gvvl~el~tg~~p~~~~~~~~~--~~~~~~--~~~~~~~~~---------~~~~~-----------------~~ 908 (968)
T PLN00113 859 SDIYGFGLILIELLTGKSPADAEFGVHG--SIVEWA--RYCYSDCHL---------DMWID-----------------PS 908 (968)
T ss_pred cchhhHHHHHHHHHhCCCCCCcccCCCC--cHHHHH--HHhcCccch---------hheeC-----------------cc
Confidence 9999999999999999999954322110 000000 000000000 00000 00
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.........+...+.+++.+||..||++|||++|+++.
T Consensus 909 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 909 IRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred ccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 001111223455678899999999999999999999875
No 394
>KOG3653|consensus
Probab=99.97 E-value=6.8e-31 Score=240.80 Aligned_cols=197 Identities=24% Similarity=0.345 Sum_probs=162.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
..-++.+.+|+|+||.||+|.. +++.||||++... ..+.+..|-++..... ..|+||+++++.-
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~------------m~h~nIl~Fi~~e 273 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ--EKQSFQNEKNIYSLPG------------MKHENILQFIGAE 273 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCHH--HHHHHHhHHHHHhccC------------ccchhHHHhhchh
Confidence 4567789999999999999954 5689999999853 3577888877776652 3899999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------CeeeccCCCCceEEe
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC--------RIIHTDIKPENILMC 178 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~--------~i~H~dlkp~NIl~~ 178 (393)
.........+++|++|- .|+|.+++... ..++.+.++++..++.||+|||+.. .|+|||||..|||+.
T Consensus 274 kr~t~~~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK 350 (534)
T KOG3653|consen 274 KRGTADRMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK 350 (534)
T ss_pred ccCCccccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc
Confidence 64443455899999998 89999999775 3899999999999999999999853 499999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchh
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSV 253 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aP 253 (393)
.|. +..|+|||+|..+.. .....+||..||||
T Consensus 351 ~Dl-------------------------------------------TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAP 387 (534)
T KOG3653|consen 351 NDL-------------------------------------------TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAP 387 (534)
T ss_pred cCC-------------------------------------------cEEeeccceeEEecCCCCCcchhhhhhhhhhcCH
Confidence 887 589999999987642 23346899999999
Q ss_pred HHHhcCC-CC-----chhhHHhHHHHHHHHHhCCCCCCC
Q psy12288 254 EVLIGAG-YG-----PAADIWSTACMAFELATGDYLFDP 286 (393)
Q Consensus 254 E~~~~~~-~~-----~~~DiwSlG~~l~ell~g~~pf~~ 286 (393)
|++.+.. +. ...||||+|.++|||+++..-+..
T Consensus 388 EvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~ 426 (534)
T KOG3653|consen 388 EVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP 426 (534)
T ss_pred HHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC
Confidence 9998863 22 468999999999999998766543
No 395
>KOG1345|consensus
Probab=99.97 E-value=2.9e-31 Score=227.47 Aligned_cols=256 Identities=20% Similarity=0.252 Sum_probs=191.9
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.+.|.+.+.||+|.||.+-+|+|+.+++.+++|.+.........+.+|...--.+ ..|.||+.-++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~L-------------s~H~hIi~tY~ 88 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFL-------------SPHQHIIDTYE 88 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceee-------------ccchhhhHHHH
Confidence 45789999999999999999999999999999999887666667777776544444 35677655544
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.-. ...++++.++||+ .|+|..-+.. .++.+....+++.|+++|+.|||+. ++||||||.+|||+.....
T Consensus 89 vaF---qt~d~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsk-nlVHRdlK~eNiLif~~df-- 159 (378)
T KOG1345|consen 89 VAF---QTSDAYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSK-NLVHRDLKAENILIFDADF-- 159 (378)
T ss_pred HHh---hcCceEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhcc-chhhcccccceEEEecCCc--
Confidence 332 3566899999999 7888776654 3488889999999999999999999 9999999999999854431
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCC----
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG---- 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~---- 260 (393)
-++||||||..+..+......-.+..|-+||++...+
T Consensus 160 ---------------------------------------~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~ 200 (378)
T KOG1345|consen 160 ---------------------------------------YRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKL 200 (378)
T ss_pred ---------------------------------------cEEEeeecccccccCceehhhhhhcccCCcHHHhhccccce
Confidence 1699999999887776555555677889999987542
Q ss_pred -CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhC----CCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 261 -YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG----PIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 261 -~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g----~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
..+.+|+|.||+++|.+++|.+||+.++.++.. ..+-+...+ ..|..+
T Consensus 201 ~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~-----Y~~~~~w~~rk~~~~P~~F---------------------- 253 (378)
T KOG1345|consen 201 VVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKP-----YWEWEQWLKRKNPALPKKF---------------------- 253 (378)
T ss_pred EecccccchheeeeeeeeecCCCcchhhhccCch-----HHHHHHHhcccCccCchhh----------------------
Confidence 478899999999999999999999855543211 111111111 111111
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCC---cCHHHHhcCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR---ASAADCLRHPWL 386 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---pt~~ell~hp~~ 386 (393)
...++.+.++.++-|..+|++| .++......-|.
T Consensus 254 -----------------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 254 -----------------NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred -----------------cccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 2456778899999999999999 566555544443
No 396
>KOG1152|consensus
Probab=99.97 E-value=1.7e-30 Score=242.95 Aligned_cols=196 Identities=27% Similarity=0.468 Sum_probs=173.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---------cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.|..+..+|+|+||.|++|.++.....|+||++.++.. ....+..|+++|..+..+ .|+|
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~-----------sH~N 630 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH-----------SHEN 630 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc-----------Cccc
Confidence 59999999999999999999999999999999876432 234556799999999433 6999
Q ss_pred ceeccccceeecCCCeEEEEEEeec--cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM--GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~--~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
|+++++.|+ ++++++++||.- +-+|++++.... .+.+.++..|+.|+..|++.||++ ||+|||||-+|+++
T Consensus 631 IlKlLdfFE----ddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~-~ivhrdikdenviv 703 (772)
T KOG1152|consen 631 ILKLLDFFE----DDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQ-GIVHRDIKDENVIV 703 (772)
T ss_pred hhhhhheee----cCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhcccccccc-CceecccccccEEE
Confidence 999999998 888999999976 679999998764 499999999999999999999999 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc-cCCCCCCCCCCCCchhHHH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI-DDHFADEIQTRQYRSVEVL 256 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~-~~~~~~~~~t~~y~aPE~~ 256 (393)
+.++ .+||+|||.+... ..+....+||..|.|||++
T Consensus 704 d~~g-------------------------------------------~~klidfgsaa~~ksgpfd~f~gtv~~aapevl 740 (772)
T KOG1152|consen 704 DSNG-------------------------------------------FVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVL 740 (772)
T ss_pred ecCC-------------------------------------------eEEEeeccchhhhcCCCcceeeeeccccchhhh
Confidence 8887 5999999987643 4556677899999999999
Q ss_pred hcCCC-CchhhHHhHHHHHHHHHhCCCCCC
Q psy12288 257 IGAGY-GPAADIWSTACMAFELATGDYLFD 285 (393)
Q Consensus 257 ~~~~~-~~~~DiwSlG~~l~ell~g~~pf~ 285 (393)
.+.+| +..-|||+||+++|-++..+.||.
T Consensus 741 ~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 741 GGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99987 788999999999999999998885
No 397
>KOG0200|consensus
Probab=99.97 E-value=2.4e-29 Score=252.83 Aligned_cols=248 Identities=19% Similarity=0.288 Sum_probs=193.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-------CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-------DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
++.++.+.||+|+||.|++|.-.. ....||||+++.... ..+.+..|+.+|+.++ .|+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g-------------~H~ 362 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG-------------KHP 362 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc-------------CCc
Confidence 344677799999999999997432 134699999885433 3567789999999995 799
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------C--------CCCCHHHHHHHHHHHHHHHHHhhhcC
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------Y--------KGIHIQNVRTIIKQVLEGLNYLHTQC 163 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------~--------~~l~~~~~~~i~~ql~~~l~~lH~~~ 163 (393)
|++.+++.+. ..+.+++|+||+ .|+|.+++.... . ..++......++.||+.|++||++.
T Consensus 363 niv~llG~~t----~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~- 437 (609)
T KOG0200|consen 363 NIVNLLGACT----QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV- 437 (609)
T ss_pred chhhheeeec----cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC-
Confidence 9999999887 467799999999 899999987654 0 1278889999999999999999998
Q ss_pred CeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--
Q psy12288 164 RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-- 241 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-- 241 (393)
+++||||-.+|||+..+. .+|++|||+++......
T Consensus 438 ~~vHRDLAaRNVLi~~~~-------------------------------------------~~kIaDFGlar~~~~~~~y 474 (609)
T KOG0200|consen 438 PCVHRDLAARNVLITKNK-------------------------------------------VIKIADFGLARDHYNKDYY 474 (609)
T ss_pred CccchhhhhhhEEecCCC-------------------------------------------EEEEccccceeccCCCCce
Confidence 999999999999998775 59999999998543221
Q ss_pred --CCCC--CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 242 --ADEI--QTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 242 --~~~~--~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.... -+..|||||.+....|+.++||||+|+++||+++ |..|+++... +.++...
T Consensus 475 ~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~--------------------~~~l~~~ 534 (609)
T KOG0200|consen 475 RTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP--------------------TEELLEF 534 (609)
T ss_pred EecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc--------------------HHHHHHH
Confidence 1112 2445999999999999999999999999999999 8899975220 0111111
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+... +.+-|..++.++.++|+.||+.+|++||++.++.+
T Consensus 535 l~~G~--------------------------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 535 LKEGN--------------------------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HhcCC--------------------------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 11111 11234566889999999999999999999998865
No 398
>KOG0984|consensus
Probab=99.96 E-value=5.7e-30 Score=211.39 Aligned_cols=201 Identities=21% Similarity=0.333 Sum_probs=162.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.-..+..||+|++|.|-+.++..+|+..|+|.+..+-. ...+...|+.+.... ..+|..+.+++
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~-------------~~CPf~V~FyG 112 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRT-------------VDCPFTVHFYG 112 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccC-------------CCCCeEEEeeh
Confidence 445567789999999999999999999999998875432 233444555544333 28899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+. ..+.+||.||.|..++..+-.. ..++..++..+-+|+..+.+||.|||++..++|||+||+|||++.++
T Consensus 113 a~~----regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G-- 186 (282)
T KOG0984|consen 113 ALF----REGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG-- 186 (282)
T ss_pred hhh----ccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC--
Confidence 776 5566999999998776654432 23456899999999999999999999999999999999999999888
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCC--CCCCCCCchhHHHhc---
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFAD--EIQTRQYRSVEVLIG--- 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~t~~y~aPE~~~~--- 258 (393)
++|+||||.+-.+..+... ..|-..|||||.+..
T Consensus 187 -----------------------------------------qVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n 225 (282)
T KOG0984|consen 187 -----------------------------------------QVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELN 225 (282)
T ss_pred -----------------------------------------cEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccC
Confidence 5999999998877655332 456789999999864
Q ss_pred -CCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy12288 259 -AGYGPAADIWSTACMAFELATGDYLFDPKA 288 (393)
Q Consensus 259 -~~~~~~~DiwSlG~~l~ell~g~~pf~~~~ 288 (393)
..|+-++||||||+++.||.+++.|+....
T Consensus 226 ~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 226 QKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred cccceeehhhhhhhhhhhhhhhccccccccC
Confidence 368999999999999999999999997544
No 399
>KOG1025|consensus
Probab=99.96 E-value=9.5e-30 Score=246.26 Aligned_cols=266 Identities=21% Similarity=0.262 Sum_probs=205.9
Q ss_pred ccccCCCCCCccccccCCeeC--CeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEeccccc--chhhHHHHHHH
Q psy12288 7 ESYMEYRPGGYCPVQIGDLFN--FRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSDQVY--ADTARDEIVLL 78 (393)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~--~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~~--~~~~~~E~~~l 78 (393)
|-.+.-+|.+..|-+..-.|. ...+..++||+|+||.||+|.+.-.|+ +||||++...+.. ...+.+|...|
T Consensus 673 el~eplapS~~~~n~~~lrI~kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~m 752 (1177)
T KOG1025|consen 673 ELVEPLAPSGFAANLALLRILKETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRM 752 (1177)
T ss_pred cccCccccccccchhhheeechhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHH
Confidence 445556666666544433332 245567899999999999998876655 6899988754433 57788999999
Q ss_pred HHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q psy12288 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLN 157 (393)
Q Consensus 79 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~ 157 (393)
..+ +|+|+++++++... ..+-||++|+ .|.|++++.... ..+.....+.++.||++|+.
T Consensus 753 asl--------------dHpnl~RLLgvc~~-----s~~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~ 812 (1177)
T KOG1025|consen 753 ASL--------------DHPNLLRLLGVCML-----STLQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMK 812 (1177)
T ss_pred hcC--------------CCchHHHHhhhccc-----chHHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHH
Confidence 999 99999999999873 2267899999 899999997754 44888899999999999999
Q ss_pred HhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc
Q psy12288 158 YLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI 237 (393)
Q Consensus 158 ~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~ 237 (393)
|||++ +++||||-.+|+||...+ .+|+.|||+++.+
T Consensus 813 YLe~q-rlVHrdLaaRNVLVksP~-------------------------------------------hvkitdfgla~ll 848 (1177)
T KOG1025|consen 813 YLEEQ-RLVHRDLAARNVLVKSPN-------------------------------------------HVKITDFGLAKLL 848 (1177)
T ss_pred HHHhc-chhhhhhhhhheeecCCC-------------------------------------------eEEEEecchhhcc
Confidence 99999 999999999999997655 4999999999876
Q ss_pred cCCCCC-----CCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh
Q psy12288 238 DDHFAD-----EIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311 (393)
Q Consensus 238 ~~~~~~-----~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~ 311 (393)
...... ..-.+-|||-|.+....|+.++||||+||++||++| |.-|+.+....+ |-+.+
T Consensus 849 ~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e----------I~dll----- 913 (1177)
T KOG1025|consen 849 APDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE----------IPDLL----- 913 (1177)
T ss_pred CcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH----------hhHHH-----
Confidence 433211 123567999999999999999999999999999998 988987665322 11110
Q ss_pred HHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 312 EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+ ..++++-|..++-++..+|.+||..|+..||+++++...
T Consensus 914 ---e-----------------------------~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~ 953 (1177)
T KOG1025|consen 914 ---E-----------------------------KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEE 953 (1177)
T ss_pred ---h-----------------------------ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence 0 012233456778899999999999999999999987653
No 400
>KOG0576|consensus
Probab=99.96 E-value=1.7e-30 Score=246.64 Aligned_cols=257 Identities=24% Similarity=0.344 Sum_probs=205.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc-chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
-.++|.++.++|.|+||.||+|++..+++..|+|+++..... ...+++|+-+++.. .|+||+.++
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc--------------~h~nivay~ 78 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDC--------------RHPNIVAYF 78 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecC--------------CCcChHHHH
Confidence 356899999999999999999999999999999999865433 45568899899988 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .....||.|||||++.+..+.... +.+++.++..+++..+.|++|||.. |=+|||||-.||++++.+.
T Consensus 79 gsyl----r~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs~-gk~hRdiKGanilltd~gD-- 150 (829)
T KOG0576|consen 79 GSYL----RRDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHSQ-GKIHRDIKGANILLTDEGD-- 150 (829)
T ss_pred hhhh----hhcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhcC-CcccccccccceeecccCc--
Confidence 9998 566799999999655555554443 5589999999999999999999998 9999999999999988885
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh---c
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI---G 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~---~ 258 (393)
+|+.|||.+..++.. .....||++|||||+-. .
T Consensus 151 -----------------------------------------vklaDfgvsaqitati~KrksfiGtpywmapEvaaverk 189 (829)
T KOG0576|consen 151 -----------------------------------------VKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERK 189 (829)
T ss_pred -----------------------------------------eeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhc
Confidence 999999998776543 44568999999999864 3
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..|...+|+|++|+...|+..-++|..+.-++ +.-.++..-|..|.....
T Consensus 190 ggynqlcdiwa~gitAiel~eLqpplfdlhpm-------r~l~LmTkS~~qpp~lkD----------------------- 239 (829)
T KOG0576|consen 190 GGYNQLCDIWALGITAIELGELQPPLFDLHPM-------RALFLMTKSGFQPPTLKD----------------------- 239 (829)
T ss_pred ccccccccccccccchhhhhhcCCcccccchH-------HHHHHhhccCCCCCcccC-----------------------
Confidence 46899999999999999998877766543311 111222222222221111
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
...-++.|.+|++.+|..+|.+||+++.+|.|||...
T Consensus 240 -------------k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 240 -------------KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred -------------CccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 1223567889999999999999999999999999864
No 401
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.1e-26 Score=202.68 Aligned_cols=207 Identities=33% Similarity=0.555 Sum_probs=175.9
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCC
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRN 113 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 113 (393)
||+|++|.||++....+++.+++|++..... ..+.+.+|+..++.+ .|++++++++.+. .
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l--------------~~~~i~~~~~~~~----~ 62 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL--------------NHPNIVKLYGVFE----D 62 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhc--------------CCCCeeeEeeeee----c
Confidence 6899999999999988899999999886543 246788999999999 6688888888887 4
Q ss_pred CeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee-chhHHhHhhhhh
Q psy12288 114 GTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV-DYDKVRRMARDA 191 (393)
Q Consensus 114 ~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~-~~~~~~~~~~~~ 191 (393)
....++++|+++ +++...+.... ..++...+..++.+++.++.+||+. |++|+||+|.||+++. +.
T Consensus 63 ~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~-~~~H~dl~~~ni~~~~~~~---------- 130 (215)
T cd00180 63 ENHLYLVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN-GIIHRDLKPENILLDSDNG---------- 130 (215)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHhhEEEeCCCC----------
Confidence 577999999995 88888776542 3478899999999999999999998 9999999999999986 44
Q ss_pred hcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CCCchhhH
Q psy12288 192 TKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GYGPAADI 267 (393)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~~~~Di 267 (393)
.++++|||.+...... .....+...|++||..... ..+.+.|+
T Consensus 131 ---------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~ 177 (215)
T cd00180 131 ---------------------------------KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDI 177 (215)
T ss_pred ---------------------------------cEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhh
Confidence 4999999988765543 3445678899999999887 77899999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
|++|++++++
T Consensus 178 ~~lg~~~~~l---------------------------------------------------------------------- 187 (215)
T cd00180 178 WSLGVILYEL---------------------------------------------------------------------- 187 (215)
T ss_pred HHHHHHHHHH----------------------------------------------------------------------
Confidence 9999999999
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 384 (393)
..+.+++.+|+..||.+||++.++++|+
T Consensus 188 ---------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 0345999999999999999999999885
No 402
>KOG1024|consensus
Probab=99.95 E-value=4e-28 Score=217.76 Aligned_cols=248 Identities=17% Similarity=0.160 Sum_probs=181.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCC-----ceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDK-----TFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
..|+++...+-+|+||.||+|.++... +.|-+|.++..... ...+..|.-++..+ .|+|
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~--------------sH~n 348 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA--------------SHPN 348 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC--------------cCCC
Confidence 468999999999999999999766432 23555655533211 12222333333332 6999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHh------cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIAR------SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~------~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
++.+.++... ....++.++++. -|+|..++.- ...++++..+...++.|++.|+++||.+ |++|.||-.
T Consensus 349 ll~V~~V~ie---~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~-~ViHkDiAa 424 (563)
T KOG1024|consen 349 LLSVLGVSIE---DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH-GVIHKDIAA 424 (563)
T ss_pred ccceeEEEee---ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc-Ccccchhhh
Confidence 9888877663 455688899999 4677766652 1123466677788999999999999998 999999999
Q ss_pred CceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCC-----CCC
Q psy12288 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQT 247 (393)
Q Consensus 173 ~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~-----~~t 247 (393)
+|.++++.- ++||+|-.+++.+-....+. ..+
T Consensus 425 RNCvIdd~L-------------------------------------------qVkltDsaLSRDLFP~DYhcLGDnEnRP 461 (563)
T KOG1024|consen 425 RNCVIDDQL-------------------------------------------QVKLTDSALSRDLFPGDYHCLGDNENRP 461 (563)
T ss_pred hcceehhhe-------------------------------------------eEEeccchhccccCcccccccCCCCCCc
Confidence 999997654 69999999998764332222 236
Q ss_pred CCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 248 RQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 248 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
..||+||.+....|+.++|+|||||++|||++ |+.|+-.-++ .++..-.++.++..+
T Consensus 462 vkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP---------------------fEm~~ylkdGyRlaQ- 519 (563)
T KOG1024|consen 462 VKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP---------------------FEMEHYLKDGYRLAQ- 519 (563)
T ss_pred ccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH---------------------HHHHHHHhccceecC-
Confidence 67999999999999999999999999999998 9999865442 222222222232222
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
|.+++++++.+|..||..+|++||+++|+..
T Consensus 520 -------------------------P~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 520 -------------------------PFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred -------------------------CCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 3577889999999999999999999999875
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=5.4e-28 Score=252.02 Aligned_cols=217 Identities=18% Similarity=0.191 Sum_probs=147.0
Q ss_pred ccceeccccceeecC---CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 98 EKVIRLLNDFKIYSR---NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~---~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
++|.++++.|..... ....++.++|+++++|.+.+... ...++..++..++.||+.||+|||++ ||+||||||+|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-gIvHrDlKP~N 110 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ-GIVVHNVRPSC 110 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC-CeeeccCCchh
Confidence 355556665532221 23457788999999999998643 24589999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--------------
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------------- 240 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------------- 240 (393)
||++..+.. .....+.+.. .+ ......+|++|||+++.....
T Consensus 111 iLl~~~~~~---------k~~d~~~~~~------------~~---~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~ 166 (793)
T PLN00181 111 FVMSSFNHV---------SFIESASCSD------------SG---SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQ 166 (793)
T ss_pred EEEcccCcE---------EEeeccccCc------------cc---ccccCcccccccccccccccccccchhhhhccccC
Confidence 999654320 0000111100 00 011235899999988643210
Q ss_pred -----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHh
Q psy12288 241 -----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315 (393)
Q Consensus 241 -----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 315 (393)
.....+|+.|+|||++.+..++.++|||||||++|||++|..|+.... ..+..+.. ...|...
T Consensus 167 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------~~~~~~~~--~~~~~~~-- 234 (793)
T PLN00181 167 PFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--------RTMSSLRH--RVLPPQI-- 234 (793)
T ss_pred CCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--------HHHHHHHH--hhcChhh--
Confidence 111357889999999999999999999999999999999887764211 11111110 0111100
Q ss_pred cCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
........+++.+||..||.+||++.|+++||||...
T Consensus 235 -------------------------------------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 235 -------------------------------------LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred -------------------------------------hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 0112344688899999999999999999999999763
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.5e-25 Score=198.33 Aligned_cols=194 Identities=34% Similarity=0.538 Sum_probs=163.2
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
|++.+.||.|++|.||+|.+..+++.+++|.+..... ..+.+.+|+..++.+ .|++++++++.+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~--------------~~~~i~~~~~~~ 66 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL--------------KHPNIVKLYGVF 66 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC--------------CCCChhhheeee
Confidence 5778999999999999999998899999999875433 356778899999988 778888888877
Q ss_pred eeecCCCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....++++|++. ++|.+.+..... .++...+..++.+++.++.+||+. +++|+||+|+||+++.+.
T Consensus 67 ~----~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~di~~~ni~v~~~~----- 135 (225)
T smart00221 67 E----DPEPLYLVMEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL-GIVHRDLKPENILLGMDG----- 135 (225)
T ss_pred e----cCCceEEEEeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCC-----
Confidence 6 4567899999994 488888766432 178889999999999999999998 999999999999997664
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHH-hcCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVL-IGAGY 261 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~-~~~~~ 261 (393)
.++|+|||.+....... ....++..|++||.+ ...++
T Consensus 136 --------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~ 177 (225)
T smart00221 136 --------------------------------------LVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGY 177 (225)
T ss_pred --------------------------------------CEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCC
Confidence 49999999887664432 445678889999998 55667
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCC
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDP 286 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~ 286 (393)
+.++|+|+||+++++|++|+.||..
T Consensus 178 ~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 178 GEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred CchhhHHHHHHHHHHHHHCCCCccc
Confidence 8899999999999999999999965
No 405
>KOG1165|consensus
Probab=99.93 E-value=1.7e-25 Score=197.21 Aligned_cols=207 Identities=23% Similarity=0.332 Sum_probs=174.4
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+++-.|+|.++||+|+||+++.|.+..++++||||+-.. ......++.|....+.|.... .|+..+
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~-------------GIP~vY 90 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTE-------------GIPQVY 90 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCC-------------CCCcee
Confidence 667799999999999999999999999999999997553 346788999999999997444 333332
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
- ++..+.+-.+|+|++|.+|.+++..+. ..|+..++..++.|++.-++++|++ .++.|||||+|+|+...+++.
T Consensus 91 Y----FGqeG~~NiLVidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k-~LIYRDIKPdNFLIGrp~~k~ 164 (449)
T KOG1165|consen 91 Y----FGQEGKYNILVIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEK-DLIYRDIKPDNFLIGRPGTKD 164 (449)
T ss_pred e----eccccchhhhhhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhc-ceeecccCccceeecCCCCCC
Confidence 2 344788899999999999999998765 5599999999999999999999999 999999999999997655311
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhH
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVE 254 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE 254 (393)
...+.++|||+|..+.++ .....||..||+--
T Consensus 165 --------------------------------------~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSIN 206 (449)
T KOG1165|consen 165 --------------------------------------ANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSIN 206 (449)
T ss_pred --------------------------------------CceEEEEeccchhhhcCccccccCccccccccccceeeeEee
Confidence 114899999999877543 22347899999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCC
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~ 289 (393)
...+.+.++..|+=|||.+|+..+-|..||++..-
T Consensus 207 THlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 207 THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred ccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 99999999999999999999999999999998764
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=1.2e-25 Score=191.98 Aligned_cols=167 Identities=19% Similarity=0.217 Sum_probs=122.4
Q ss_pred ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCC
Q psy12288 126 YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205 (393)
Q Consensus 126 ~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (393)
|+|.+.+.... ..+++.++..++.|++.||.|||++ + ||+||+++.++
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~-~------kp~Nil~~~~~------------------------ 48 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQ-A------KSGNILLTWDG------------------------ 48 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhc-C------CcccEeEcCcc------------------------
Confidence 57777776532 4599999999999999999999988 6 99999998776
Q ss_pred CCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCC
Q psy12288 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFD 285 (393)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~ 285 (393)
.+++ ||++...... ...+|+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 49 -------------------~~~~--fG~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~ 105 (176)
T smart00750 49 -------------------LLKL--DGSVAFKTPE--QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYN 105 (176)
T ss_pred -------------------ceee--ccceEeeccc--cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence 3677 9987754432 2367899999999999999999999999999999999999996
Q ss_pred CCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHH--HHHHHH
Q psy12288 286 PKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEAS--DFADFL 363 (393)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li 363 (393)
..... ...+..+........... ...+...+. .+.++|
T Consensus 106 ~~~~~-----~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 106 EEREL-----SAILEILLNGMPADDPRD-----------------------------------RSNLESVSAARSFADFM 145 (176)
T ss_pred ccchh-----cHHHHHHHHHhccCCccc-----------------------------------cccHHHHHhhhhHHHHH
Confidence 43311 111111111110000000 000012222 688999
Q ss_pred HhccccCCCCCcCHHHHhcCCCCC
Q psy12288 364 LPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 364 ~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
.+||..||.+||++.|+++|+|+.
T Consensus 146 ~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 146 RVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHHhcccccccCHHHHHHHHHHH
Confidence 999999999999999999999875
No 407
>KOG1163|consensus
Probab=99.93 E-value=1.1e-24 Score=184.10 Aligned_cols=204 Identities=20% Similarity=0.303 Sum_probs=167.2
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+.+|+++++||.|+||.+|.|.....|+.||||+-..+. ....+.-|..+.+.+.+...+ | .+..
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g~Gi----------P---~i~~ 78 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGGVGI----------P---HIRH 78 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccCCCC----------c---hhhh
Confidence 3568999999999999999999999999999999876543 346678899999999655432 2 2222
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
. ..+..+-++||+.+|.+|.+++.-+. ..++..+++.++.|++.-++|+|.+ +.+||||||+|+|+..+-.
T Consensus 79 y----~~e~~ynvlVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r-~fiHRDIKPdNFLMGlgrh--- 149 (341)
T KOG1163|consen 79 Y----GTEKDYNVLVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLR-NFIHRDIKPDNFLMGLGRH--- 149 (341)
T ss_pred h----ccccccceeeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhh-ccccccCCccceeeccccc---
Confidence 2 23677889999999999998886654 4599999999999999999999998 9999999999999965532
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhHH
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVEV 255 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE~ 255 (393)
..++.|+|||++....+. .....||..|.+--.
T Consensus 150 -------------------------------------~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinA 192 (341)
T KOG1163|consen 150 -------------------------------------CNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINA 192 (341)
T ss_pred -------------------------------------cceEEEEeccchhhhccccccccCccccCCccceeeeehhhhh
Confidence 125899999999876432 234478999999888
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~ 289 (393)
..+...++..|+=|+|.++...--|..||++...
T Consensus 193 h~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 193 HLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred hhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 8888889999999999999999999999997763
No 408
>KOG1164|consensus
Probab=99.92 E-value=1.9e-23 Score=195.45 Aligned_cols=208 Identities=27% Similarity=0.308 Sum_probs=167.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCC-ceEEEEEEeccccc-chhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDK-TFVALKIVKSDQVY-ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+|++.++||+|+||.||.|.+..++ ..+|+|+....... ...+..|..+++.+... ....++..+++.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~----------~~~~~~~~~~~~ 88 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKK----------NGPSHFPKLLDH 88 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhh----------cCCCCCCEEEEe
Confidence 8999999999999999999988775 67899987654222 23788999999999531 123455555555
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
.. ..+.+.++||+.+|.+|.++........++..++.+++.|++.+|++||+. |++||||||+|+++......
T Consensus 89 G~---~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~-G~iHRDiKp~N~~~g~~~~~--- 161 (322)
T KOG1164|consen 89 GR---STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK-GFIHRDIKPENFVVGQSSRS--- 161 (322)
T ss_pred cc---CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc-CcccCCcCHHHeeecCCCCc---
Confidence 53 256788999999999999988766656799999999999999999999998 99999999999999654310
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccc--ccc-C-------C---CCCCCCCCCCchh
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNAC--WID-D-------H---FADEIQTRQYRSV 253 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~--~~~-~-------~---~~~~~~t~~y~aP 253 (393)
..-.+.|.|||+++ ... . . .....||..|.++
T Consensus 162 -----------------------------------~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~ 206 (322)
T KOG1164|consen 162 -----------------------------------EVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASI 206 (322)
T ss_pred -----------------------------------ccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccH
Confidence 01158999999998 321 1 1 1234599999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~ 288 (393)
.+..+...+++.|+||++.++.++..|..||....
T Consensus 207 ~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 207 NVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred HHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 99999999999999999999999999999997655
No 409
>KOG0590|consensus
Probab=99.91 E-value=2.2e-25 Score=221.70 Aligned_cols=265 Identities=19% Similarity=0.254 Sum_probs=183.6
Q ss_pred CeE-EEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRY-HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.| ....++|.|++|.|+.+......+.++.|.+... ....+...... +...+ .+-....|++++..+
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~-i~sE~--------~i~~~l~h~~~~e~l 387 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYN-ITSEF--------CIGSSLSHPNIIETL 387 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhh-hhhhe--------eecccccCCchhhhH
Confidence 456 4567899999998888877777666666654311 11111110100 11111 111222677776666
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
..+.. .....-+||||.++|+..+.+. ..++..++..++.|++.|+.|+|+. |+.|||+|++|+++..++
T Consensus 388 ~~~~~----~~~~~~~mE~~~~Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~-GiahrdlK~enll~~~~g--- 457 (601)
T KOG0590|consen 388 DIVQE----IDGILQSMEYCPYDLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSM-GLAHRDLKLENLLVTENG--- 457 (601)
T ss_pred HHHhh----cccchhhhhcccHHHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhc-CceeccCccccEEEecCC---
Confidence 55552 2222333999966999988775 2388899999999999999999998 999999999999998877
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHHh
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~ 257 (393)
.+|++|||.+...... ....+|+..|+|||++.
T Consensus 458 ----------------------------------------~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~ 497 (601)
T KOG0590|consen 458 ----------------------------------------ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLT 497 (601)
T ss_pred ----------------------------------------ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCccccc
Confidence 4999999987654322 23457899999999999
Q ss_pred cCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
+..| .+..||||.|+++..|++|+.||..+...+... ....+ ...
T Consensus 498 ~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--------~~~~~---------------------~~~----- 543 (601)
T KOG0590|consen 498 GKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--------KTNNY---------------------SDQ----- 543 (601)
T ss_pred ccccCcchhhhhhccceEEEEecCCCccccccccccch--------hhhcc---------------------ccc-----
Confidence 9988 678999999999999999999997665433110 00000 000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+..+...+....+..-..+|.+||++||.+|.|+++|++++||+.+.
T Consensus 544 -----~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 544 -----RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred -----cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 0011111122345566778999999999999999999999999998764
No 410
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.88 E-value=1.1e-21 Score=176.23 Aligned_cols=245 Identities=17% Similarity=0.181 Sum_probs=147.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcc-cCCCCcccccCcccccceec
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGR-KSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~-~~~~~~~~~~~~~~~~i~~~ 103 (393)
.....+.||.|+++.||.+.+..|++.+|+|++...... .+.+.+|.-....+.. .+.... ..+-.++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a-----~~~~r~l~P 87 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEA-----YRHLRFLVP 87 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHH-----HHHH-B---
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHH-----HHhceEEee
Confidence 456788999999999999999999999999987643211 1223333322222111 000000 001112222
Q ss_pred ccccee--------ecCCCeE-----EEEEEeeccccHHHHHHh---cCCCC--CCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 104 LNDFKI--------YSRNGTH-----ICMVFEVMGYNLLRLIAR---SDYKG--IHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 104 ~~~~~~--------~~~~~~~-----~~iv~e~~~~~l~~~~~~---~~~~~--l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
++.... ....... .+++|+-+.++|..++.. ..... +.......+..|+++.+++||.. |+
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-Gl 166 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-GL 166 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TE
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc-ce
Confidence 222221 1111122 377888888888877642 21111 22223345568999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCC
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI 245 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~ 245 (393)
+|+||+|+|++++.++ .+.|+||+.....+.......
T Consensus 167 VHgdi~~~nfll~~~G-------------------------------------------~v~Lg~F~~~~r~g~~~~~~~ 203 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDG-------------------------------------------GVFLGDFSSLVRAGTRYRCSE 203 (288)
T ss_dssp EEST-SGGGEEE-TTS--------------------------------------------EEE--GGGEEETTEEEEGGG
T ss_pred EecccceeeEEEcCCC-------------------------------------------CEEEcChHHHeecCceeeccC
Confidence 9999999999999888 499999998776665433344
Q ss_pred CCCCCchhHHHhcC--------CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcC
Q psy12288 246 QTRQYRSVEVLIGA--------GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317 (393)
Q Consensus 246 ~t~~y~aPE~~~~~--------~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 317 (393)
.+..|.+||..... .++.+.|.|+||+++|.|+|+..||...+.......
T Consensus 204 ~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---------------------- 261 (288)
T PF14531_consen 204 FPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---------------------- 261 (288)
T ss_dssp S-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG----------------------
T ss_pred CCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc----------------------
Confidence 56789999987553 468899999999999999999999964432111000
Q ss_pred cccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCC
Q psy12288 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374 (393)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 374 (393)
.+....+.++.+.+||+++|.+||++|
T Consensus 262 ------------------------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 262 ------------------------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp ------------------------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred ------------------------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 111123677888999999999999998
No 411
>KOG4158|consensus
Probab=99.87 E-value=3.4e-22 Score=180.36 Aligned_cols=258 Identities=17% Similarity=0.210 Sum_probs=179.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc-----------------------------------eEEEEEEecccccchhhH
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT-----------------------------------FVALKIVKSDQVYADTAR 72 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----------------------------------~vaiK~~~~~~~~~~~~~ 72 (393)
++|++.+.||+|....||.|+...++. +.|||++-+-. .-.
T Consensus 157 ddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~----~~s 232 (598)
T KOG4158|consen 157 DDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFE----HDS 232 (598)
T ss_pred hhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccc----cCC
Confidence 579999999999999999997655221 23455432210 012
Q ss_pred HHHHHHHHhcccCC------------------CCcccccCcccccceeccccceeec-----------------------
Q psy12288 73 DEIVLLKAVGRKSN------------------VHSSAYNTQASEKVIRLLNDFKIYS----------------------- 111 (393)
Q Consensus 73 ~E~~~l~~l~~~~~------------------~~~~~~~~~~~~~i~~~~~~~~~~~----------------------- 111 (393)
....+|+.++..-. ..-.-.+...||||+++...|...-
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~ 312 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGA 312 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccccc
Confidence 23344444433211 1112234468999999998885310
Q ss_pred CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhh
Q psy12288 112 RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDA 191 (393)
Q Consensus 112 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~ 191 (393)
..+..+|+||..+..+|..++.... .+....+-++.|+++|+.+||.+ ||.|||+|.+|||+..|.+.+
T Consensus 313 g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~h-gvAhRDlKSDNiL~ElddD~~------- 381 (598)
T KOG4158|consen 313 GEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQLLEAVTHLHKH-GVAHRDLKSDNILLELDDDEI------- 381 (598)
T ss_pred CCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHHc-cchhhcccccceEEEecCCCC-------
Confidence 1345689999999999999987653 67778888999999999999998 999999999999997665321
Q ss_pred hcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---------cCCCCCCCCCCCCchhHHHhcCCC-
Q psy12288 192 TKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---------DDHFADEIQTRQYRSVEVLIGAGY- 261 (393)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~- 261 (393)
..++++|||.+.-. .+.....-|+-..||||+....+-
T Consensus 382 --------------------------------P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp 429 (598)
T KOG4158|consen 382 --------------------------------PQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP 429 (598)
T ss_pred --------------------------------cEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence 14899999975321 122334456778899999876531
Q ss_pred -----CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 262 -----GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 262 -----~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
-.++|.|+.|.+.||++....||.+.......... ...
T Consensus 430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-------Yqe------------------------------ 472 (598)
T KOG4158|consen 430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-------YQE------------------------------ 472 (598)
T ss_pred ceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh-------hhh------------------------------
Confidence 35899999999999999999999864432211100 000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHH
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA 378 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 378 (393)
.+...+++.++..+.+++..+|+.||++|+++.
T Consensus 473 ---------~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 473 ---------SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred ---------hhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 122235567788889999999999999999853
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=2.4e-20 Score=173.71 Aligned_cols=259 Identities=29% Similarity=0.411 Sum_probs=189.6
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccc-cceecc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASE-KVIRLL 104 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~-~i~~~~ 104 (393)
|.+...||.|+||.||.+.+. ..+++|.+..... ....+.+|..+++.+ .++ +++++.
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~--------------~~~~~i~~~~ 64 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASL--------------NHPPNIVKLY 64 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHc--------------cCCcceeeEE
Confidence 788999999999999999887 7789998875432 255678888888888 444 678888
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+. .....+++++++ ++++.+.+..... ..+.......++.|++.+++++|.. +++|||+||+||+++....
T Consensus 65 ~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~-~~~hrd~kp~nil~~~~~~ 139 (384)
T COG0515 65 DFFQ----DEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK-GIIHRDIKPENILLDRDGR 139 (384)
T ss_pred EEEe----cCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeecCCCC
Confidence 7774 444589999999 6676655544321 1488899999999999999999998 9999999999999976651
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---------CCCCCCCCCCchh
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------FADEIQTRQYRSV 253 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------~~~~~~t~~y~aP 253 (393)
.++++|||.+...... .....++..|++|
T Consensus 140 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~p 177 (384)
T COG0515 140 ------------------------------------------VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177 (384)
T ss_pred ------------------------------------------eEEEeccCcceecCCCCccccccccccccccccccCCH
Confidence 3899999988754322 3456789999999
Q ss_pred HHHhc---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCC--ChHHHhcCcccccccCCCC
Q psy12288 254 EVLIG---AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPI--PKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 254 E~~~~---~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~--p~~~~~~~~~~~~~~~~~~ 328 (393)
|.+.+ .......|+||+|+++++++.|..||...... ................ .....
T Consensus 178 e~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-------------- 240 (384)
T COG0515 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTPSLASPLS-------------- 240 (384)
T ss_pred HHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCcccccccC--------------
Confidence 99998 56789999999999999999999997654421 0011222221111110 00000
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.. ........+.+++.+++..+|..|.+..+...++|....
T Consensus 241 ------------------~~--~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 241 ------------------PS--NPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred ------------------cc--ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 00 001223567799999999999999999998888666543
No 413
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=6.6e-22 Score=185.09 Aligned_cols=159 Identities=23% Similarity=0.190 Sum_probs=118.4
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCC-CCceEEEEEEecc------cccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSD------QVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
.+.++|++.+.||+|+||.||+|++.. +++.||||..... ......+.+|+.+|+.+ .|
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L--------------~h 80 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV--------------RG 80 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc--------------cC
Confidence 456789999999999999999998876 6778899986532 11245688999999999 56
Q ss_pred cccee-ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC-CCCc
Q psy12288 98 EKVIR-LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI-KPEN 174 (393)
Q Consensus 98 ~~i~~-~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl-kp~N 174 (393)
+++++ +++ .+..++||||+ +++|. ... . .. ...++.|++.||++||++ ||+|||| ||+|
T Consensus 81 ~~iv~~l~~--------~~~~~LVmE~~~G~~L~-~~~--~---~~---~~~~~~~i~~aL~~lH~~-gIiHrDL~KP~N 142 (365)
T PRK09188 81 IGVVPQLLA--------TGKDGLVRGWTEGVPLH-LAR--P---HG---DPAWFRSAHRALRDLHRA-GITHNDLAKPQN 142 (365)
T ss_pred CCCCcEEEE--------cCCcEEEEEccCCCCHH-HhC--c---cc---hHHHHHHHHHHHHHHHHC-CCeeCCCCCcce
Confidence 66653 322 12378999999 55554 221 1 11 146789999999999998 9999999 9999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----------CCC
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----------FAD 243 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----------~~~ 243 (393)
||++.++ .++|+|||+++..... ..+
T Consensus 143 ILv~~~~-------------------------------------------~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~ 179 (365)
T PRK09188 143 WLMGPDG-------------------------------------------EAAVIDFQLASVFRRRGALYRIAAYEDLRH 179 (365)
T ss_pred EEEcCCC-------------------------------------------CEEEEECccceecccCcchhhhhhhhhhhh
Confidence 9997655 4999999998865322 123
Q ss_pred CCCCCCCchhHHHhc
Q psy12288 244 EIQTRQYRSVEVLIG 258 (393)
Q Consensus 244 ~~~t~~y~aPE~~~~ 258 (393)
..++..|++||.+..
T Consensus 180 ~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 180 LLKHKRTYAPDALTP 194 (365)
T ss_pred hhccCccCCcccCCh
Confidence 356777899998864
No 414
>KOG0603|consensus
Probab=99.86 E-value=7.7e-23 Score=194.95 Aligned_cols=237 Identities=21% Similarity=0.348 Sum_probs=187.3
Q ss_pred EecccCceEEEEEEeCC---CCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 35 KLGWGHFSTVWLSWDLQ---DKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++|+|+||.|++++... .+..+|.|++++... .......|-.++..+. .++.++++...|+
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~-------------~~~f~v~lhyafq 67 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH-------------NTPFLVKLHYAFQ 67 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc-------------CCCceeeeeeeec
Confidence 47999999999986443 356788888764321 1223445666777762 5888889888887
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
..+..++++++. ++.++....... .+.+.....+...++.|++.+|+. +++|+|+|++||+++.++.
T Consensus 68 ----t~~kl~l~ld~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l-~iiyrd~k~enilld~~Gh----- 135 (612)
T KOG0603|consen 68 ----TDGKLYLILDFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKL-GIAYRDYKLENVLLLLEGH----- 135 (612)
T ss_pred ----cccchhHhhhhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchh-HHHHhcccccceeecccCc-----
Confidence 667789999999 668777766553 367778888999999999999998 9999999999999998884
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhH
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADI 267 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di 267 (393)
+++.|||+++........ +||..|||||+.. +...++|.
T Consensus 136 --------------------------------------i~~tdfglske~v~~~~~-cgt~eymApEI~~--gh~~a~D~ 174 (612)
T KOG0603|consen 136 --------------------------------------IKLTDFGLSKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADW 174 (612)
T ss_pred --------------------------------------cccCCchhhhHhHhhhhc-ccchhhhhhHhhh--ccCCcccc
Confidence 899999998866444333 8899999999998 56889999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
||+|+++++|++|..||.. +... .+++.
T Consensus 175 ws~gvl~felltg~~pf~~----------~~~~------------------------------------------~Il~~ 202 (612)
T KOG0603|consen 175 WSFGVLAFELLTGTLPFGG----------DTMK------------------------------------------RILKA 202 (612)
T ss_pred hhhhhhHHHHhhCCCCCch----------HHHH------------------------------------------HHhhh
Confidence 9999999999999999964 2222 22333
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....+...+..+.++++.++..+|..|.. +.|+++|+||..+
T Consensus 203 ~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 203 ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence 44556777888999999999999999996 4899999999764
No 415
>KOG0195|consensus
Probab=99.86 E-value=4.2e-22 Score=171.43 Aligned_cols=241 Identities=15% Similarity=0.192 Sum_probs=182.8
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEec---ccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+..+|.+...|..|+|+++.. .+++|+++. +......+..|.-.|+.+ .||||+++++.
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrif--------------shpnilpvlga 255 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIF--------------SHPNILPVLGA 255 (448)
T ss_pred hhhhhhhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeee--------------cCCchhhhhhh
Confidence 34677899999999999988644 455676653 344456778888888888 89999999999
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee-eccCCCCceEEeechhHH
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII-HTDIKPENILMCVDYDKV 184 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~-H~dlkp~NIl~~~~~~~~ 184 (393)
+. ....+.++..|+ .++|++.+.....--....++.+++.+++.|++|||+--.++ ---|....+++|+|-.
T Consensus 256 cn----sppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedlt-- 329 (448)
T KOG0195|consen 256 CN----SPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLT-- 329 (448)
T ss_pred cc----CCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhh--
Confidence 97 556789999999 789999987765444567788999999999999999853443 3468888999988763
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCC---
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY--- 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--- 261 (393)
.++...|--++.. .......+.||+||.++..+-
T Consensus 330 ---------------------------------------arismad~kfsfq----e~gr~y~pawmspealqrkped~n 366 (448)
T KOG0195|consen 330 ---------------------------------------ARISMADTKFSFQ----EVGRAYSPAWMSPEALQRKPEDLN 366 (448)
T ss_pred ---------------------------------------hheecccceeeee----ccccccCcccCCHHHHhcCchhcc
Confidence 1344555443332 223345789999999998753
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
-+++|+|||++++||+.|.+.||.+.++++... .+.+.|..
T Consensus 367 ~raadmwsfaillwel~trevpfadlspmecgm-------kialeglr-------------------------------- 407 (448)
T KOG0195|consen 367 IRAADMWSFAILLWELNTREVPFADLSPMECGM-------KIALEGLR-------------------------------- 407 (448)
T ss_pred hhhhhHHHHHHHHHHhhccccccccCCchhhhh-------hhhhcccc--------------------------------
Confidence 468999999999999999999999888766432 22233321
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 381 (393)
...+.+.+....+||.-|++.||.+||.++.++
T Consensus 408 -------v~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 408 -------VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred -------ccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 124567788899999999999999999988764
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=2.5e-20 Score=162.60 Aligned_cols=176 Identities=16% Similarity=0.161 Sum_probs=124.9
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchh----------hHHHHHHHHHhcccCCCCccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADT----------ARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~----------~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
+.++.+|++.+.+|.|+||.||++.. ++..+|+|++.......+. +.+|+..+..+
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL------------ 92 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV------------ 92 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH------------
Confidence 35688999999999999999999755 4667999998744322222 47888889998
Q ss_pred CcccccceeccccceeecC----CCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 94 TQASEKVIRLLNDFKIYSR----NGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~----~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.|+++..+.+.+.+... ..+..+++|||+. .+|.+.. .++. ....+++.++..+|.. |++||
T Consensus 93 --~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~-gi~H~ 159 (232)
T PRK10359 93 --RSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQH-GMVSG 159 (232)
T ss_pred --HHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHc-CCccC
Confidence 56666666555443211 1345899999995 4565542 1332 2456899999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~ 248 (393)
|++|+||+++.++ ++++|||.........
T Consensus 160 Dikp~Nili~~~g--------------------------------------------i~liDfg~~~~~~e~~------- 188 (232)
T PRK10359 160 DPHKGNFIVSKNG--------------------------------------------LRIIDLSGKRCTAQRK------- 188 (232)
T ss_pred CCChHHEEEeCCC--------------------------------------------EEEEECCCcccccchh-------
Confidence 9999999997654 8999999765432111
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHh
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELAT 279 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~ 279 (393)
..........+..++|+||||+++.-+..
T Consensus 189 --a~d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 189 --AKDRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred --hHHHHHHHhHhcccccccceeEeehHHHH
Confidence 11113344456789999999998776543
No 417
>KOG1240|consensus
Probab=99.83 E-value=8.5e-21 Score=189.99 Aligned_cols=243 Identities=22% Similarity=0.292 Sum_probs=172.2
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.|...+.||++.|=.|.+|.+... .|+||++-+. ......+.+++.-.+... ..+||++++...
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG--~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l------------~~~pn~lPfqk~ 89 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREG--LVVVKVFVKQDPTISLRPFKQRLEEIKFAL------------MKAPNCLPFQKV 89 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCc--eEEEEEEeccCCCCCchHHHHHHHHHHHHh------------hcCCcccchHHH
Confidence 688899999999999999977643 3899987643 333455555554444221 278888888776
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe-echhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC-VDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~-~~~~~~~ 185 (393)
.. .+...++|=+|...+|.+.+..+.. +...+.+-|+-|+++||.-+|.. ||||||||.+|||++ .|+
T Consensus 90 ~~----t~kAAylvRqyvkhnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~-gVcHGDIKsENILiTSWNW---- 158 (1431)
T KOG1240|consen 90 LV----TDKAAYLVRQYVKHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKL-GVCHGDIKSENILITSWNW---- 158 (1431)
T ss_pred HH----hhHHHHHHHHHHhhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHc-CccccccccceEEEeeech----
Confidence 55 4555677778888899998877654 67788889999999999999998 999999999999995 444
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCC-------CCCCCCCCchhHH
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFA-------DEIQTRQYRSVEV 255 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~-------~~~~t~~y~aPE~ 255 (393)
+.|+||..-++.- ++.. +...-..|.|||.
T Consensus 159 ----------------------------------------~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPER 198 (1431)
T KOG1240|consen 159 ----------------------------------------LYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPER 198 (1431)
T ss_pred ----------------------------------------hhhhcccccCCccCCCCCcccceEEEecCCceeeecChHh
Confidence 7899998654321 1100 1122346999999
Q ss_pred HhcC----------C-CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 256 LIGA----------G-YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 256 ~~~~----------~-~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
+... + .+++=||+|+||+++||++ |.+||. ..++-.........|...++
T Consensus 199 Fv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~----------LSQL~aYr~~~~~~~e~~Le-------- 260 (1431)
T KOG1240|consen 199 FVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT----------LSQLLAYRSGNADDPEQLLE-------- 260 (1431)
T ss_pred hhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc----------HHHHHhHhccCccCHHHHHH--------
Confidence 8652 2 5788999999999999988 799994 22221111111111121111
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.-++..+..+|..|++.||++|.+|++.|+-
T Consensus 261 -----------------------------~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 261 -----------------------------KIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred -----------------------------hCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 1223467799999999999999999999875
No 418
>KOG0606|consensus
Probab=99.82 E-value=1.5e-20 Score=187.88 Aligned_cols=220 Identities=21% Similarity=0.332 Sum_probs=154.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+|..++.|..|+||.||.++|+.+.+.+|+|+-+.+- ... + ++... ..+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-ilR---n---ilt~a--------------~np-------- 132 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-ILR---N---ILTFA--------------GNP-------- 132 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccch-hhh---c---ccccc--------------CCc--------
Confidence 358999999999999999999999999999996544321 100 0 11111 111
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+.| |+=...+..- +.++.+. +.+++|+|.. ||+|||+||+|.++..=+
T Consensus 133 -----------fvv-----gDc~tllk~~--g~lPvdm--------vla~Eylh~y-givhrdlkpdnllIT~mG----- 180 (1205)
T KOG0606|consen 133 -----------FVV-----GDCATLLKNI--GPLPVDM--------VLAVEYLHSY-GIVHRDLKPDNLLITSMG----- 180 (1205)
T ss_pred -----------cee-----chhhhhcccC--CCCcchh--------hHHhHhhccC-CeecCCCCCCcceeeecc-----
Confidence 111 3333333322 2233333 6789999998 999999999999997655
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc----CC--------------CCCCCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID----DH--------------FADEIQTR 248 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~----~~--------------~~~~~~t~ 248 (393)
.+|++|||++.... .. ....+||+
T Consensus 181 --------------------------------------hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTP 222 (1205)
T KOG0606|consen 181 --------------------------------------HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTP 222 (1205)
T ss_pred --------------------------------------cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCc
Confidence 49999999875421 00 11237899
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
.|.|||++...+|+..+|+|++|+|+|+.+.|+.||.+.++.+ .+...+.....-|+.
T Consensus 223 eyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee------lfg~visd~i~wpE~---------------- 280 (1205)
T KOG0606|consen 223 EYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE------LFGQVISDDIEWPEE---------------- 280 (1205)
T ss_pred cccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH------HHhhhhhhhcccccc----------------
Confidence 9999999999999999999999999999999999998876332 222222221111111
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc---CHHHHhcCCCCCCCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA---SAADCLRHPWLNPRR 390 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~ell~hp~~~~~~ 390 (393)
......++.++|.++|..+|..|. .+-++-+|+||....
T Consensus 281 -----------------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 281 -----------------------DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD 322 (1205)
T ss_pred -----------------------CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence 123456788999999999999998 467899999998753
No 419
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=1.1e-19 Score=156.47 Aligned_cols=123 Identities=18% Similarity=0.170 Sum_probs=87.5
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEeccccc----------chhh-----------------HHHHHHHHHhcccC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----------ADTA-----------------RDEIVLLKAVGRKS 85 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------~~~~-----------------~~E~~~l~~l~~~~ 85 (393)
.+.||+|++|.||+|.+. +|+.||+|+++..... ...+ ..|+..++.+.+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999887 8999999998754211 1122 24888888884321
Q ss_pred CCCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHh-hhcC
Q psy12288 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLL-RLIARSDYKGIHIQNVRTIIKQVLEGLNYL-HTQC 163 (393)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~-~~~~~~~~~~l~~~~~~~i~~ql~~~l~~l-H~~~ 163 (393)
. .+|.+. . . .. .++||||++++.+ ...... ..++...+..++.|++.+|.++ |+.
T Consensus 81 v---------~~p~~~------~-~--~~--~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~- 137 (190)
T cd05147 81 I---------PCPEPI------L-L--KS--HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDC- 137 (190)
T ss_pred C---------CCCcEE------E-e--cC--CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 1 111111 1 0 11 3799999965433 332222 3588899999999999999999 677
Q ss_pred CeeeccCCCCceEEee
Q psy12288 164 RIIHTDIKPENILMCV 179 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~ 179 (393)
|++||||||+||+++.
T Consensus 138 giiHrDlkP~NIli~~ 153 (190)
T cd05147 138 RLVHADLSEYNLLYHD 153 (190)
T ss_pred CcccCCCCHHHEEEEC
Confidence 9999999999999973
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=2e-18 Score=149.08 Aligned_cols=124 Identities=20% Similarity=0.158 Sum_probs=87.9
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEeccccc---------------------------chhhHHHHHHHHHhcccC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---------------------------ADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~E~~~l~~l~~~~ 85 (393)
.+.||+|++|.||+|.+. +|+.||||++...... ......|...+..+.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-- 78 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE-- 78 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh--
Confidence 468999999999999887 8999999998754211 0112467778888743
Q ss_pred CCCcccccCcccccceeccccceeecCCCeEEEEEEeecccc-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cC
Q psy12288 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYN-LLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QC 163 (393)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~-l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~ 163 (393)
+++........ . ..++||||++|. +....... ..++...+..++.|++.++.++|. .
T Consensus 79 ------------~~i~~p~~~~~----~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~- 137 (190)
T cd05145 79 ------------AGVPVPEPILL----K--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEA- 137 (190)
T ss_pred ------------CCCCCceEEEe----c--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 32211111111 1 137999999554 33322222 347788999999999999999999 7
Q ss_pred CeeeccCCCCceEEeech
Q psy12288 164 RIIHTDIKPENILMCVDY 181 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~ 181 (393)
|++||||||+||+++ ++
T Consensus 138 givHrDlkP~NIll~-~~ 154 (190)
T cd05145 138 GLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CEecCCCChhhEEEE-CC
Confidence 999999999999997 44
No 421
>KOG1166|consensus
Probab=99.77 E-value=6.1e-18 Score=172.26 Aligned_cols=201 Identities=20% Similarity=0.259 Sum_probs=150.1
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+-+.+|.|.+.||+|+||.||+|.+.. ++.||+|+-+...... +.--.+++.+|. .. .-+.++.+.
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE--fYI~~q~~~RLk-~~----------~~~~~~~~~ 760 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE--FYICLQVMERLK-PQ----------MLPSIMHIS 760 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee--eeehHHHHHhhc-hh----------hhcchHHHH
Confidence 447899999999999999999998877 9999999877543222 122223344442 11 112233333
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
..+. ..+.-++|++|. .|+|++++... ..+++..++.++.|++..++.||.. +|+|+||||+|+|+...-.
T Consensus 761 ~a~~----~~~~S~lv~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~-~IIHgDiKPDNfll~~~~~- 832 (974)
T KOG1166|consen 761 SAHV----FQNASVLVSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAM-GIIHGDIKPDNFLLRREIC- 832 (974)
T ss_pred HHHc----cCCcceeeeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhc-ceecccCCcceeEeecccC-
Confidence 3333 234467899999 89999998743 4588999999999999999999997 9999999999999953321
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-----CCCCCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-----DHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-----~~~~~~~~t~~y~aPE~~~~ 258 (393)
.+.. ...++|+|||.+..+. ......++|-.+-++|...+
T Consensus 833 -------------------------------~~~~----~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~g 877 (974)
T KOG1166|consen 833 -------------------------------ADSD----SKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG 877 (974)
T ss_pred -------------------------------CCCc----ccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcC
Confidence 0000 1148999999886542 23345577899999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCC
Q psy12288 259 AGYGPAADIWSTACMAFELATGDY 282 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~ 282 (393)
++++..+|.|.|+.+++.|+.|++
T Consensus 878 rpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 878 RPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred CCCchhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999964
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=6.2e-17 Score=138.42 Aligned_cols=182 Identities=15% Similarity=0.055 Sum_probs=129.8
Q ss_pred EEEEEecccCceEEEEEEeCCCCceEEEEEEecccccch-----hhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 31 HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD-----TARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+...|++|+||.|+++.. .+.+++.+.+...+.... .+.+|+++|+.+.+ +++++++++
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~-------------~~~vP~ll~ 69 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDG-------------LPRTPRLLH 69 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCC-------------CCCCCEEEE
Confidence 4578999999999998744 677888787775544333 57899999999942 345555554
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC-CCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI-KPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl-kp~NIl~~~~~~~ 183 (393)
. ...+++|+|+ |.+|..... .. ...++.|++.+|+++|.+ ||+|||| ||+|||++.++
T Consensus 70 ~--------~~~~lvmeyI~G~~L~~~~~--------~~-~~~~~~qi~~~L~~lH~~-GIvHrDL~kp~NILv~~~g-- 129 (218)
T PRK12274 70 W--------DGRHLDRSYLAGAAMYQRPP--------RG-DLAYFRAARRLLQQLHRC-GVAHNDLAKEANWLVQEDG-- 129 (218)
T ss_pred E--------cCEEEEEeeecCccHHhhhh--------hh-hHHHHHHHHHHHHHHHHC-cCccCCCCCcceEEEcCCC--
Confidence 2 1268999999 545543221 11 135788999999999998 9999999 79999997665
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----------------CCCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----------------DEIQT 247 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----------------~~~~t 247 (393)
.++|+|||++........ -...+
T Consensus 130 -----------------------------------------~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~ 168 (218)
T PRK12274 130 -----------------------------------------SPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYC 168 (218)
T ss_pred -----------------------------------------CEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 499999999874432110 01246
Q ss_pred CCCchhHHHhcC-CCC-chhhHHhHHHHHHHHHhCCCCCCCCC
Q psy12288 248 RQYRSVEVLIGA-GYG-PAADIWSTACMAFELATGDYLFDPKA 288 (393)
Q Consensus 248 ~~y~aPE~~~~~-~~~-~~~DiwSlG~~l~ell~g~~pf~~~~ 288 (393)
+.+++|+...-. ..+ ...+..+.|.-+|.++|+..+..+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 169 PAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred CCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 777788765443 334 45566699999999999998886554
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.72 E-value=8e-17 Score=140.08 Aligned_cols=129 Identities=19% Similarity=0.241 Sum_probs=98.2
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
.+.||+|+||.||. +..++.. +||++... ......+.+|+.+++.+.+.. ..|+||+++++.+....
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~---------~~h~nIvr~yg~~et~~ 74 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRL---------IDWSGIPRYYGTVETDC 74 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccC---------CCCcccceeeEEEEeCC
Confidence 47899999999995 7777666 68987643 223466899999999996533 26899999999887432
Q ss_pred CCCeE-EEEEEeecc---ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHH-HHhhhcCCeeeccCCCCceEEeec
Q psy12288 112 RNGTH-ICMVFEVMG---YNLLRLIARSDYKGIHIQNVRTIIKQVLEGL-NYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 112 ~~~~~-~~iv~e~~~---~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l-~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
..+. +.+|+||.| ++|.+++... .+++. ..++.|++.++ +|||++ +|+||||||+||+++..
T Consensus 75 -g~g~v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~-~IvhrDlKp~NILl~~~ 141 (210)
T PRK10345 75 -GTGYVYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN-RIVTMELKPQNILCQRI 141 (210)
T ss_pred -CCeEEEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEecc
Confidence 2234 448999954 7999888653 25544 35678888887 899998 99999999999999754
No 424
>KOG1033|consensus
Probab=99.72 E-value=5.9e-18 Score=158.82 Aligned_cols=175 Identities=25% Similarity=0.359 Sum_probs=131.7
Q ss_pred eEEEEEEeec-cccHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhh
Q psy12288 115 THICMVFEVM-GYNLLRLIAR-SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDAT 192 (393)
Q Consensus 115 ~~~~iv~e~~-~~~l~~~~~~-~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~ 192 (393)
.+++|.|++| ..+|.+++.+ ......+......++.|+..|+.| + |.+|+|+||.||++..+.
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~~~d~----------- 393 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFFSDDD----------- 393 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhccccccccccch-----------
Confidence 4688999999 5666676653 333346677888999999999999 6 999999999999998776
Q ss_pred cccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---------CCCCCCCCCCCchhHHHhcCCCCc
Q psy12288 193 KHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---------HFADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.+++.|||+...... .....+||..||+||.+.+..|+.
T Consensus 394 --------------------------------q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~ 441 (516)
T KOG1033|consen 394 --------------------------------QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSE 441 (516)
T ss_pred --------------------------------hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhh
Confidence 389999998765421 345568999999999999999999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++||||||++++|++.- |.- ..+..+-..+ .-|.+|+.++..
T Consensus 442 kvdIyaLGlil~EL~~~---f~T--------~~er~~t~~d~r~g~ip~~~~~d-------------------------- 484 (516)
T KOG1033|consen 442 KVDIYALGLILAELLIQ---FST--------QFERIATLTDIRDGIIPPEFLQD-------------------------- 484 (516)
T ss_pred hcchhhHHHHHHHHHHH---hcc--------HHHHHHhhhhhhcCCCChHHhhc--------------------------
Confidence 99999999999999972 110 1112222222 225556544321
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.+.-..|+.+||...|.+||++.+.-.|+|.
T Consensus 485 -------------~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 485 -------------YPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred -------------CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 2234589999999999999998888888775
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=5.4e-17 Score=144.51 Aligned_cols=127 Identities=17% Similarity=0.112 Sum_probs=91.5
Q ss_pred eEEEEEEecccCceEEEEEE-eCCCCceEEEEEEeccccc-------------------------chhhHHHHHHHHHhc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSW-DLQDKTFVALKIVKSDQVY-------------------------ADTARDEIVLLKAVG 82 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~-------------------------~~~~~~E~~~l~~l~ 82 (393)
-|++.+.||+|++|.||+|. +..+|+.||+|++...... ...+.+|+..++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 6778999999998743210 012457888888884
Q ss_pred ccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeecccc-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYN-LLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 83 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~-l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
+. ...+++.+.. . ..++|||++++. +....... ..+...++..++.|++.++++||+
T Consensus 109 ~~------------~i~~p~~~~~------~--~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~ 166 (237)
T smart00090 109 EA------------GVPVPKPIAW------R--RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYK 166 (237)
T ss_pred hc------------CCCCCeeeEe------c--CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHh
Confidence 21 1111222211 1 247999999664 43332222 235566678999999999999999
Q ss_pred cCC-eeeccCCCCceEEe
Q psy12288 162 QCR-IIHTDIKPENILMC 178 (393)
Q Consensus 162 ~~~-i~H~dlkp~NIl~~ 178 (393)
. | ++|+||||+||+++
T Consensus 167 ~-g~iiH~Dikp~NIli~ 183 (237)
T smart00090 167 E-GELVHGDLSEYNILVH 183 (237)
T ss_pred c-CCEEeCCCChhhEEEE
Confidence 8 9 99999999999997
No 426
>KOG1023|consensus
Probab=99.68 E-value=2.5e-16 Score=150.52 Aligned_cols=201 Identities=18% Similarity=0.277 Sum_probs=146.0
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCe-eeccCCCC
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRI-IHTDIKPE 173 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i-~H~dlkp~ 173 (393)
.|.|+.++++... ++...++|.++| .|+|.+.+.... ..+..-....+++++++||+|+|.. .+ .|+.++..
T Consensus 5 ~h~n~~~f~g~~~----~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s-~i~~hg~l~s~ 78 (484)
T KOG1023|consen 5 DHDNLNKFIGASV----DGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNS-PIGYHGALKSS 78 (484)
T ss_pred chhhhhhheeeEe----cCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcC-cceeeeeeccc
Confidence 7889999999888 567899999999 889998887643 3466667778899999999999987 55 99999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCC
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTR 248 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~ 248 (393)
|.+++..+ .+|++|||+...... .........
T Consensus 79 nClvd~~w-------------------------------------------~lklt~~Gl~~~~~~~~~~~~~~~~~~~~ 115 (484)
T KOG1023|consen 79 NCLVDSRW-------------------------------------------VLKLTDFGLNSLLEETAEPEAHHPIRKAL 115 (484)
T ss_pred cceeeeeE-------------------------------------------EEEechhhhcccccccccccccchhHHHH
Confidence 99999998 599999998765432 111112245
Q ss_pred CCchhHHHhcCC-------CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 249 QYRSVEVLIGAG-------YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 249 ~y~aPE~~~~~~-------~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
-|.|||.+.... .+.+.|+||+|++++|+++.+-||......... .+.+..+.. .+..
T Consensus 116 lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~--~eii~~~~~-~~~~------------ 180 (484)
T KOG1023|consen 116 LWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP--DEIILRVKK-GGSN------------ 180 (484)
T ss_pred hccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCCh--HHHHHHHHh-cCCC------------
Confidence 689999998741 367899999999999999999999865544322 222222222 1110
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+++ ......+..+.+..++++||..+|++||+++++-.
T Consensus 181 -~~rP---------------------~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 181 -PFRP---------------------SIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred -CcCc---------------------chhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 0000 00000123346889999999999999999988754
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.64 E-value=6.3e-16 Score=134.49 Aligned_cols=122 Identities=25% Similarity=0.289 Sum_probs=86.1
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc-----------------------chhhHHHHHHHHHhcccCC
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-----------------------ADTARDEIVLLKAVGRKSN 86 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------------------~~~~~~E~~~l~~l~~~~~ 86 (393)
|.+.+.||+|+||.||+|... +++.||||++..+... ......|..++..+.+...
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 888999999999999999875 7899999987643210 1124567777777733210
Q ss_pred CCcccccCcccccceeccccceeecCCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
.+++.++ ....+++|||+.+ ++.... . ......++.+++.++.++|+. |+
T Consensus 96 ------------~v~~~~~--------~~~~~lv~e~~~g~~L~~~~-~-------~~~~~~~~~~i~~~l~~lh~~-gi 146 (198)
T cd05144 96 ------------PVPKPID--------WNRHAVVMEYIDGVELYRVR-V-------LEDPEEVLDEILEEIVKAYKH-GI 146 (198)
T ss_pred ------------CCCceee--------cCCceEEEEEeCCcchhhcc-c-------cccHHHHHHHHHHHHHHHHHC-CC
Confidence 1222221 1235899999944 443321 1 134567889999999999998 99
Q ss_pred eeccCCCCceEEeech
Q psy12288 166 IHTDIKPENILMCVDY 181 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~ 181 (393)
+|+||+|+||+++.++
T Consensus 147 ~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 147 IHGDLSEFNILVDDDE 162 (198)
T ss_pred CcCCCCcccEEEcCCC
Confidence 9999999999998765
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.61 E-value=6e-15 Score=129.63 Aligned_cols=118 Identities=17% Similarity=0.206 Sum_probs=86.7
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccccc---------chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---------ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.||+|++|.||+|.. ++..+++|+....... .....+|+.++..+. +++++...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------------~~~i~~p~ 65 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR--------------KAGVNVPA 65 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH--------------HCCCCCCe
Confidence 5789999999999977 6778999976532211 134567888888883 33332222
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
..+. .....+++|||+ |++|.+.+.... . ....++.+++.+|+++|+. |++|+|++|+||+++
T Consensus 66 ~~~~----~~~~~~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~-~i~H~Dl~p~Nil~~ 129 (211)
T PRK14879 66 VYFV----DPENFIIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSA-GIIHGDLTTSNMILS 129 (211)
T ss_pred EEEE----eCCCCEEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhC-CcccCCCCcccEEEE
Confidence 2222 233468999999 667777765421 2 7788999999999999998 999999999999997
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.59 E-value=1.9e-14 Score=125.22 Aligned_cols=114 Identities=17% Similarity=0.211 Sum_probs=81.1
Q ss_pred EecccCceEEEEEEeCCCCceEEEEEEecccc---------cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 35 KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.||+|++|.||+|.. ++..|++|....... ...++.+|+.+++.+.+.+. .++..+.
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i------------~~p~~~~ 66 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGV------------NTPVVYD 66 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCC------------CCCEEEE
Confidence 379999999999973 577899998653211 12445679999999843221 1112211
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
. .....+++||++ ++++.+.+.... . .++.+++.+|+++|+. |++|+|++|.||+++
T Consensus 67 --~----~~~~~~lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~-gi~H~Dl~~~Nil~~ 124 (199)
T TIGR03724 67 --V----DPDNKTIVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKA-GIVHGDLTTSNIIVR 124 (199)
T ss_pred --E----ECCCCEEEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHC-CeecCCCCcceEEEE
Confidence 1 233457999999 677776654321 1 7899999999999998 999999999999998
No 430
>KOG0590|consensus
Probab=99.57 E-value=2.1e-16 Score=157.65 Aligned_cols=259 Identities=23% Similarity=0.316 Sum_probs=186.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-CceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-KTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
...|.+.+-||+|+|+.|-.+....+ ...+|.|.+.... ........|..+.+.+. .|.|++.
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s-------------~h~n~~~ 85 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLS-------------KHSNTVH 85 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccc-------------ccccccc
Confidence 45788899999999999988877554 3346666554332 22233344555555552 3788888
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhh-hcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLH-TQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH-~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++... .....++++++. +++++..+........+...+-.++.|+..++.|+| .. ++.|+|+||+|.+++..
T Consensus 86 ~~~~~~----~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~-~~~h~~ikP~n~~l~~s 160 (601)
T KOG0590|consen 86 MIEPSS----SPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN-GVTHRDIKPSNSLLDES 160 (601)
T ss_pred cCCccC----CCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc-ccccCCCCCccchhccC
Confidence 877665 677889999998 777777763333324677778889999999999999 77 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-C-----CCCCCC-CCCCchh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-H-----FADEIQ-TRQYRSV 253 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-~-----~~~~~~-t~~y~aP 253 (393)
+. .++..|||++..... . ....+| ++.|+||
T Consensus 161 ~~------------------------------------------~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~ 198 (601)
T KOG0590|consen 161 GS------------------------------------------ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAP 198 (601)
T ss_pred CC------------------------------------------cccCCCchhhccccccCCcceeeecccCCCCCCCCc
Confidence 52 378999999876543 1 234567 9999999
Q ss_pred HHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|...+.. .....|+||+|+++..+++|..||.......... . .+.. .+.
T Consensus 199 E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~--------------------------~-~~~~---~~~ 248 (601)
T KOG0590|consen 199 EHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY--------------------------S-SWKS---NKG 248 (601)
T ss_pred ccccchhhcCCCcccccccccccccccCCCCccccccccccc--------------------------e-eecc---ccc
Confidence 9999854 3788999999999999999999996443221000 0 0000 000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
......+...+....+++.++|..+|..|.+.+++-.+||+..
T Consensus 249 -------------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 249 -------------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred -------------ccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 0001123455667789999999999999999999999999987
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1.9e-14 Score=123.88 Aligned_cols=122 Identities=22% Similarity=0.268 Sum_probs=78.8
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhh-------------------------HHHHHHHHHhcccCCC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA-------------------------RDEIVLLKAVGRKSNV 87 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------------~~E~~~l~~l~~~~~~ 87 (393)
.+.||+|+||.||+|.+. +++.||||++.......... ..|...+..+....
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-- 78 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG-- 78 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC--
Confidence 467999999999999876 78899999887532211111 23344444432110
Q ss_pred CcccccCcccccceeccccceeecCCCeEEEEEEeeccc-cHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cCC
Q psy12288 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLL-RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QCR 164 (393)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~-~l~-~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~~ 164 (393)
..+++.+.. ...+++|||+++ .+. ..+.... . ..++..++.+++.++.++|. . +
T Consensus 79 ----------~~~~~~~~~--------~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~-~ 135 (187)
T cd05119 79 ----------VPVPKPIDL--------NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREA-G 135 (187)
T ss_pred ----------CCCCceEec--------CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhcc-C
Confidence 111122111 135899999955 211 1111110 1 16678899999999999999 7 9
Q ss_pred eeeccCCCCceEEeech
Q psy12288 165 IIHTDIKPENILMCVDY 181 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~ 181 (393)
++|+||||+||+++ ++
T Consensus 136 ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 136 LVHGDLSEYNILVD-DG 151 (187)
T ss_pred cCcCCCChhhEEEE-CC
Confidence 99999999999998 44
No 432
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.55 E-value=3.2e-14 Score=142.20 Aligned_cols=121 Identities=18% Similarity=0.170 Sum_probs=85.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEE-eccc--------ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQ--------VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~-~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
...|...+.||+|+||.||+|...... +++|.. .... ...+.+.+|+.+++.+ .+
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~~ 395 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEA--------------RR 395 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh--------------cc
Confidence 345567889999999999999765443 344432 1110 1124567899999998 44
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
++++....... .....++||||+ +++|.+.+. ....++.+++.+|.+||+. |++||||||+||+
T Consensus 396 ~~i~~p~~~~~----~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~-giiHrDlkp~NIL 460 (535)
T PRK09605 396 AGVPTPVIYDV----DPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA-GIVHGDLTTSNFI 460 (535)
T ss_pred cCCCeeEEEEE----eCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC-CCccCCCChHHEE
Confidence 44433322222 233467999999 667776653 3467899999999999998 9999999999999
Q ss_pred Ee
Q psy12288 177 MC 178 (393)
Q Consensus 177 ~~ 178 (393)
++
T Consensus 461 l~ 462 (535)
T PRK09605 461 VR 462 (535)
T ss_pred EE
Confidence 94
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.45 E-value=1.4e-12 Score=116.37 Aligned_cols=125 Identities=16% Similarity=0.134 Sum_probs=80.9
Q ss_pred Eec-ccCceEEEEEEeCCCCceEEEEEEecc--------------cccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 35 KLG-WGHFSTVWLSWDLQDKTFVALKIVKSD--------------QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 35 ~lg-~G~~g~V~~~~~~~~~~~vaiK~~~~~--------------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.|| .|+.|.||.+... +..+++|.+... ......+.+|+.++..+.+.. ..
T Consensus 38 ~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~g------------i~ 103 (239)
T PRK01723 38 VVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAG------------LP 103 (239)
T ss_pred eeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCC------------CC
Confidence 455 6666777777553 667888877431 112345678999999994422 11
Q ss_pred ceeccccceeecCCCeEEEEEEeecc--ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
+++.+.............++|||++. .+|.+.+... .++.+ .+.+++.++++||+. ||+|+||||+|||+
T Consensus 104 vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~-GI~HrDlkp~NILv 175 (239)
T PRK01723 104 VPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDA-GVYHADLNAHNILL 175 (239)
T ss_pred CceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHC-CCCCCCCCchhEEE
Confidence 23344332211111223469999994 4677666432 24443 357899999999998 99999999999999
Q ss_pred eech
Q psy12288 178 CVDY 181 (393)
Q Consensus 178 ~~~~ 181 (393)
+.++
T Consensus 176 ~~~~ 179 (239)
T PRK01723 176 DPDG 179 (239)
T ss_pred cCCC
Confidence 7655
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.44 E-value=1e-12 Score=108.45 Aligned_cols=123 Identities=24% Similarity=0.227 Sum_probs=90.6
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
+++.||+|.++.||++.... ..+++|....... ...+.+|..+++.+.+. ...+++++..+.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~------------~~~~p~~~~~~~--- 63 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARK------------GLPVPKVLASGE--- 63 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHc------------CCCCCeEEEEcC---
Confidence 45789999999999998753 6789998765433 46788999999999542 123445444443
Q ss_pred CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC--CeeeccCCCCceEEeech
Q psy12288 112 RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC--RIIHTDIKPENILMCVDY 181 (393)
Q Consensus 112 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~--~i~H~dlkp~NIl~~~~~ 181 (393)
..+..+++|||+.+...... +......++.+++.+++.+|... +++|+|++|+||+++.++
T Consensus 64 -~~~~~~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~ 126 (155)
T cd05120 64 -SDGWSYLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGK 126 (155)
T ss_pred -CCCccEEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCc
Confidence 34678999999955433221 34556678899999999999841 699999999999997644
No 435
>KOG0601|consensus
Probab=99.42 E-value=3.1e-13 Score=129.57 Aligned_cols=258 Identities=21% Similarity=0.250 Sum_probs=184.2
Q ss_pred ccCCeeCCeEEEEEEecc--cCceEEEEEEe--CCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 21 QIGDLFNFRYHVIRKLGW--GHFSTVWLSWD--LQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~--G~~g~V~~~~~--~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
....++...+.+...+|. |.+|.||.+.. ..++..+|+|.-+.- ......-.+|+...+.+
T Consensus 107 ~~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i------------ 174 (524)
T KOG0601|consen 107 PFDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKI------------ 174 (524)
T ss_pred CccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhccccc------------
Confidence 344566788999999999 99999999988 888889999863321 11122223344333333
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHH----HHHHhhhcCCeeecc
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLE----GLNYLHTQCRIIHTD 169 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~----~l~~lH~~~~i~H~d 169 (393)
..|++.++....+. .++..++-+|.++.++..+...-. ..++...+.....+... ||..+|.. +++|-|
T Consensus 175 -~~~~~~v~~~~~~e----~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~-~~~~~~ 247 (524)
T KOG0601|consen 175 -DSHENPVRDSPAWE----GSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSN-NIVHDD 247 (524)
T ss_pred -CccccccccCcccc----cCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCC-cccccc
Confidence 26777777666665 678899999999988887765432 33777888888888888 99999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-------
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------- 242 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~------- 242 (393)
+||+||+...++. ..+++|||+...++....
T Consensus 248 ~kp~~i~~~~~~~------------------------------------------s~~~~df~~v~~i~~~~~~~~~~~~ 285 (524)
T KOG0601|consen 248 LKPANIFTTSDWT------------------------------------------SCKLTDFGLVSKISDGNFSSVFKVS 285 (524)
T ss_pred cchhheecccccc------------------------------------------eeecCCcceeEEccCCccccceeee
Confidence 9999999977742 488999998877654321
Q ss_pred -CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCC-CCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc
Q psy12288 243 -DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPK-AGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320 (393)
Q Consensus 243 -~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~-~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 320 (393)
...+...|++||+..+. ++.+.|++++|.++.+..++..+.... ... ..++.. +.+|.+
T Consensus 286 ~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-----W~~~r~-----~~ip~e-------- 346 (524)
T KOG0601|consen 286 KRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLPSVGKNSS-----WSQLRQ-----GYIPLE-------- 346 (524)
T ss_pred ecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcccccCCCCCC-----cccccc-----ccCchh--------
Confidence 11467789999998877 789999999999999998876554321 100 000000 001111
Q ss_pred ccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+...-+..+...+..|+..+|..|++++.+..|+++..
T Consensus 347 ------------------------------~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 347 ------------------------------FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred ------------------------------hhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 11223344555889999999999999999999998864
No 436
>KOG1243|consensus
Probab=99.35 E-value=1.8e-11 Score=118.85 Aligned_cols=181 Identities=16% Similarity=0.266 Sum_probs=130.1
Q ss_pred EEEEEEecccCceEEE-EEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 30 YHVIRKLGWGHFSTVW-LSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~-~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
|++ ...+-++.+ +| .|..+.++.+|.|...+.... ..+...+.+.-|+.+ .||+|+++++.+
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl--------------RHP~Il~yL~t~ 78 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTL--------------RHPNILSYLDTT 78 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhc--------------cCchhhhhhhhh
Confidence 444 444444444 45 466777889999998876543 234466777788888 899999999999
Q ss_pred eeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 108 KIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
. ..+..|+|+|.+.. |..++.. +....+.-.+.||+.||.|||+.|+++|++|..+.++|+..+.
T Consensus 79 e----~~~~~ylvTErV~P-l~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~Ge----- 143 (690)
T KOG1243|consen 79 E----EEGTLYLVTERVRP-LETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGE----- 143 (690)
T ss_pred c----ccCceEEEeecccc-HHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCc-----
Confidence 8 66689999999831 1122222 3356777789999999999998889999999999999988874
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC---CCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA---DEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.||++|.++........ ....-..|..|+.+.... -.
T Consensus 144 --------------------------------------WkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s 183 (690)
T KOG1243|consen 144 --------------------------------------WKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WS 183 (690)
T ss_pred --------------------------------------EEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cc
Confidence 99999988765432221 111223456666544332 46
Q ss_pred hhHHhHHHHHHHHHhCC
Q psy12288 265 ADIWSTACMAFELATGD 281 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~ 281 (393)
.|.|.||+++++++.|.
T Consensus 184 ~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 184 IDSWGLGCLIEELFNGS 200 (690)
T ss_pred hhhhhHHHHHHHHhCcc
Confidence 79999999999999993
No 437
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.25 E-value=6.2e-11 Score=101.42 Aligned_cols=124 Identities=17% Similarity=0.145 Sum_probs=82.0
Q ss_pred EEecccCceEEEEEEeCC------CCceEEEEEEecccc-----------------------cchhhH----HHHHHHHH
Q psy12288 34 RKLGWGHFSTVWLSWDLQ------DKTFVALKIVKSDQV-----------------------YADTAR----DEIVLLKA 80 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~~~-----------------------~~~~~~----~E~~~l~~ 80 (393)
..||.|.-+.||.|.... .+..+|||+++.+.. ....+. +|...|+.
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999997653 247899998753110 011122 68888888
Q ss_pred hcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeecccc-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHh
Q psy12288 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYN-LLRLIARSDYKGIHIQNVRTIIKQVLEGLNYL 159 (393)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~-l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~l 159 (393)
+.... -.+++.++. ..-++|||+++++ +....... ..++.++...+..+++.++..+
T Consensus 83 l~~~G------------v~vP~pi~~--------~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l 140 (197)
T cd05146 83 MQKAG------------IPCPEVVVL--------KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQL 140 (197)
T ss_pred HHHcC------------CCCCeEEEe--------cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHH
Confidence 85432 123333332 1257899999653 21111111 1245566778889999999998
Q ss_pred -hhcCCeeeccCCCCceEEeec
Q psy12288 160 -HTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 160 -H~~~~i~H~dlkp~NIl~~~~ 180 (393)
|.. |++|+||++.||++..+
T Consensus 141 ~H~~-glVHGDLs~~NIL~~~~ 161 (197)
T cd05146 141 YKEC-NLVHADLSEYNMLWHDG 161 (197)
T ss_pred HHhC-CeecCCCCHHHEEEECC
Confidence 776 99999999999999643
No 438
>KOG0601|consensus
Probab=99.22 E-value=1.7e-11 Score=117.75 Aligned_cols=254 Identities=17% Similarity=0.113 Sum_probs=172.1
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeC-CCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDL-QDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
....+|..+..||.|+|+.|+.+... .++..+++|.+.+.. .....-..|+.+...+. .|.++
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~-------------~~~~~ 328 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILG-------------SHLPS 328 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhh-------------ccccc
Confidence 34567999999999999999998655 567788999765431 11223356777777764 55566
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+.....+. .....++--|+| ++++.....- ...+.+...+++..|++.++-++|+. .++|+|++|+||++..
T Consensus 329 ~g~~~~W~----~~r~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~-~~~~~d~~psni~i~~ 401 (524)
T KOG0601|consen 329 VGKNSSWS----QLRQGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSK-LFVHLDVKPSNILISN 401 (524)
T ss_pred CCCCCCcc----ccccccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccch-hhhcccccccceeecc
Confidence 66555555 333455888899 5544443322 23377888999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCc--hhHHHh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYR--SVEVLI 257 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~--aPE~~~ 257 (393)
++. -.++.|||....+.-......++-.++ ++....
T Consensus 402 ~~~------------------------------------------~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e 439 (524)
T KOG0601|consen 402 DGF------------------------------------------FSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLE 439 (524)
T ss_pred chh------------------------------------------hhhccccccccccceecccccccccccccchhhcc
Confidence 531 256788887654332222222333344 455555
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
...+..++|++|||..+.+.+++...-.....
T Consensus 440 ~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~------------------------------------------------ 471 (524)
T KOG0601|consen 440 DYPHLSKADIFSLGLSVDEAITGSPLSESGVQ------------------------------------------------ 471 (524)
T ss_pred ccccccccccccccccccccccCcccCccccc------------------------------------------------
Confidence 56678999999999999999998653322110
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
...++.+..+........+..+.+.+...++..||.+.++..|+=|.....
T Consensus 472 ---~~~i~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~~~ 522 (524)
T KOG0601|consen 472 ---SLTIRSGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRDSR 522 (524)
T ss_pred ---ceeeecccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhhhcc
Confidence 111122222222344477889999999999999999999999976654433
No 439
>KOG0606|consensus
Probab=99.19 E-value=6.1e-12 Score=127.08 Aligned_cols=281 Identities=20% Similarity=0.217 Sum_probs=172.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
+.+.+.+-+-+|.++.++.+.-..++...++|+............ +......++ .++..+|.++.....+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~------~s~r~~s~~----~i~p~~P~v~~~~~s~ 873 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDY------ESIRSKSNI----LITPRSPAVVRSFPSF 873 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccc------cccCCccCc----cccCCCCceecccCCC
Confidence 567788888999999999997777776667776554322111100 111111111 1112344444333332
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. -.....++++|. ++++...+.... +.+.+-++.....+..+.++||.. .+.|+|++|.|++...++...
T Consensus 874 ~----~rsP~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~-~r~h~~~~p~~~l~~~~gh~~-- 944 (1205)
T KOG0606|consen 874 P----CRSPLPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSS-LRKHRDLKPDSLLIAYDGHRP-- 944 (1205)
T ss_pred C----CCCCcchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccc-hhhcccccccchhhcccCCcc--
Confidence 2 344578999999 677777766543 466677777888899999999976 699999999999998776411
Q ss_pred hhhhhhccc---ccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-------CCCCCCCCCCCCchhHHH
Q psy12288 187 MARDATKHH---KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-------DHFADEIQTRQYRSVEVL 256 (393)
Q Consensus 187 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-------~~~~~~~~t~~y~aPE~~ 256 (393)
+..+. +.|... + .....+..+. ...-+++...... .......+|+.|.+||..
T Consensus 945 ----l~~~~t~~~vg~~~-p-------~~~~sg~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~ 1007 (1205)
T KOG0606|consen 945 ----LTDFGTLSKVGLIP-P-------TTDLSGPSSS-----GTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEIL 1007 (1205)
T ss_pred ----cCcccccccccccc-C-------cCCccccccc-----CccccccccccccccccchhhccccccCCCcccCCccc
Confidence 00000 000000 0 0000000000 1111222111111 012234689999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+.....++|+|++|+++++.++|.+||......... +-+... .
T Consensus 1008 lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f----------~ni~~~--------------------------~ 1051 (1205)
T KOG0606|consen 1008 LGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIF----------ENILNR--------------------------D 1051 (1205)
T ss_pred ccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhh----------hccccC--------------------------C
Confidence 9999999999999999999999999999876643211 100000 0
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHH---HHhcCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA---DCLRHPWLNPR 389 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~---ell~hp~~~~~ 389 (393)
. .....+...+....+++.+.|..+|.+|..+. ++-.||||.++
T Consensus 1052 ~---------~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1052 I---------PWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred C---------CCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence 0 00112234567788999999999999999987 99999999875
No 440
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.16 E-value=1.6e-10 Score=97.70 Aligned_cols=115 Identities=16% Similarity=0.068 Sum_probs=78.7
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
++.++.|.++.||++... +..+++|+.............|..+++.+..... +++++...
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~-------------~P~~~~~~----- 62 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGI-------------GPKLYYFD----- 62 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCC-------------CCceEEEe-----
Confidence 467889999999999764 7789999876554334456889999999854321 12222221
Q ss_pred CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCe-----eeccCCCCceEEe
Q psy12288 113 NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRI-----IHTDIKPENILMC 178 (393)
Q Consensus 113 ~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i-----~H~dlkp~NIl~~ 178 (393)
....++|||++.|...... . . .....+.+++.+++.||.. ++ +|+|++|.||+++
T Consensus 63 -~~~~~lv~e~i~G~~l~~~---~---~---~~~~~~~~l~~~l~~LH~~-~~~~~~~~HgD~~~~Nil~~ 122 (170)
T cd05151 63 -PETGVLITEFIEGSELLTE---D---F---SDPENLEKIAKLLKKLHSS-PLPDLVPCHNDLLPGNFLLD 122 (170)
T ss_pred -CCCCeEEEEecCCCccccc---c---c---cCHHHHHHHHHHHHHHhCC-CCCCceeecCCCCcCcEEEE
Confidence 1124689999955432211 0 1 1134567899999999987 74 9999999999998
No 441
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.14 E-value=6.6e-11 Score=116.29 Aligned_cols=137 Identities=19% Similarity=0.321 Sum_probs=76.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-----------------------------------cchhhHH
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-----------------------------------YADTARD 73 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------------------------------~~~~~~~ 73 (393)
.|+. +.||.|++|.||+|+...+|+.||||+....-. ....+.+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 5666 789999999999999998899999999874310 0111223
Q ss_pred HHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHH--HhcCC--CCCCHHHHHHH
Q psy12288 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLI--ARSDY--KGIHIQNVRTI 148 (393)
Q Consensus 74 E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~--~~~~~--~~l~~~~~~~i 148 (393)
|+.+.+.......+.. .. .+...+.+...+. .-.+..++||||+ |+.+.+.. ..... ..+....+..+
T Consensus 200 ElD~~~Ea~N~~~~~~---~f-~~~~~v~VP~v~~---d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~ 272 (537)
T PRK04750 200 ELDLMREAANASQLRR---NF-EDSDMLYVPEVYW---DYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVF 272 (537)
T ss_pred hhCHHHHHHHHHHHHH---Hc-cCCCCeecceeec---ccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHH
Confidence 3333333211100000 00 0111122222221 1234568999999 66665532 21110 01333344455
Q ss_pred HHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 149 ~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.|++ .. |++|+|++|.||+++.++
T Consensus 273 ~~Qif-------~~-GffHaDpHPGNIlv~~~g 297 (537)
T PRK04750 273 FTQVF-------RD-GFFHADMHPGNIFVSYDP 297 (537)
T ss_pred HHHHH-------hC-CeeeCCCChHHeEEecCC
Confidence 55554 35 999999999999998765
No 442
>KOG1266|consensus
Probab=99.12 E-value=1e-10 Score=104.32 Aligned_cols=200 Identities=17% Similarity=0.176 Sum_probs=132.6
Q ss_pred ccccceeccccceeecC-CCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcC-CeeeccC
Q psy12288 96 ASEKVIRLLNDFKIYSR-NGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQC-RIIHTDI 170 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~-~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~-~i~H~dl 170 (393)
.|.|++++..++..... +......++||+ .|++..++.+-. ...+......+++.||+.||.|||+-- .++|+++
T Consensus 125 vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppiihgnl 204 (458)
T KOG1266|consen 125 VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNL 204 (458)
T ss_pred HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCc
Confidence 68889998888874433 445688899999 788887776532 234677788899999999999999742 4899999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--------CCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--------DHFA 242 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--------~~~~ 242 (393)
.-+-|++..++- +|+ |.+.-.... ....
T Consensus 205 Tc~tifiq~ngL-------------------------------------------Iki-g~~ap~s~h~s~~~~~~~Ek~ 240 (458)
T KOG1266|consen 205 TCDTIFIQHNGL-------------------------------------------IKI-GSVAPDSTHPSVNSTREAEKS 240 (458)
T ss_pred chhheeecCCce-------------------------------------------EEe-cccCccccchhhhhhhHhhhh
Confidence 999999875441 222 211100000 0111
Q ss_pred CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCC-CCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~p-f~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
-..+-++|.+||.-..-..+.++|||++|....+|..+..- -.+.+..+ ..+..+.. .
T Consensus 241 ~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~---~ee~ia~~--i---------------- 299 (458)
T KOG1266|consen 241 VNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVE---VEENIANV--I---------------- 299 (458)
T ss_pred ccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceee---hhhhhhhh--e----------------
Confidence 22346788899877666678899999999999999988653 22222111 00000000 0
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
+ ..+...-.+++++||.-.|..||++++++.||.+-++.
T Consensus 300 ---------------------------~---~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 300 ---------------------------I---GLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVH 338 (458)
T ss_pred ---------------------------e---eccCccccCcCcccccCCCCCCcchhhhhcCceeeecc
Confidence 0 00111223789999999999999999999999876554
No 443
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.10 E-value=4.8e-10 Score=108.81 Aligned_cols=136 Identities=19% Similarity=0.257 Sum_probs=77.4
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccC----C----C------------------
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS----N----V------------------ 87 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~----~----~------------------ 87 (393)
+.||.|++|.||+|... +|+.||||+.... ..+.+..++.+++.+...- . .
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~--i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 199 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPG--IEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELD 199 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCC--cHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHC
Confidence 56999999999999765 7899999997642 2334444444444321000 0 0
Q ss_pred -------Cccc-ccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHH-HHH
Q psy12288 88 -------HSSA-YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLE-GLN 157 (393)
Q Consensus 88 -------~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~-~l~ 157 (393)
.... -....+++ +.+...+.. ..+..++||||+ |.++.+...... ... ....++.+++. .+.
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~-v~vP~v~~~---~~~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 200 LRREAANASELGENFKNDPG-VYVPEVYWD---RTSERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFLN 271 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCC-EEeCCEehh---hcCCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHHH
Confidence 0000 00011121 222222221 123468999999 556655443211 112 22345555555 367
Q ss_pred HhhhcCCeeeccCCCCceEEeech
Q psy12288 158 YLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 158 ~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
.+|.. |++|+|++|.||+++.++
T Consensus 272 ql~~~-g~~H~D~hPgNilv~~~g 294 (437)
T TIGR01982 272 QVLRD-GFFHADLHPGNIFVLKDG 294 (437)
T ss_pred HHHhC-CceeCCCCcccEEECCCC
Confidence 78887 999999999999997765
No 444
>KOG3087|consensus
Probab=99.01 E-value=5.2e-09 Score=86.50 Aligned_cols=130 Identities=15% Similarity=0.144 Sum_probs=88.7
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEE-Eecc--------cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKI-VKSD--------QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~-~~~~--------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
....+-+|+-+.|+++.. .|+.+.||. +.+. .....+..+|..+|..+..-.. ..|.+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI---------~~P~l-- 77 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGI---------PAPRL-- 77 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCceE--
Confidence 467889999999999955 577777773 3221 2224566779998888843321 22221
Q ss_pred ccccceeecCCCeEEEEEEeeccc--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGY--NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~--~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+ |. +...-.|+||++.| ++.+++...............++..+-..+.-||.+ +++|+||..+||++..+
T Consensus 78 -~--~~----D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n-diiHGDLTTSNill~~~ 149 (229)
T KOG3087|consen 78 -I--FI----DTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN-DIIHGDLTTSNILLRSD 149 (229)
T ss_pred -E--EE----ecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-CeecccccccceEEecC
Confidence 1 11 22234688999966 777777664433233333367889999999999998 99999999999999877
Q ss_pred hh
Q psy12288 181 YD 182 (393)
Q Consensus 181 ~~ 182 (393)
+.
T Consensus 150 ~~ 151 (229)
T KOG3087|consen 150 GN 151 (229)
T ss_pred CC
Confidence 64
No 445
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.86 E-value=1.3e-08 Score=86.89 Aligned_cols=114 Identities=24% Similarity=0.275 Sum_probs=68.4
Q ss_pred EEEEEEeCCCCceEEEEEEeccccc---------------------------chhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 43 TVWLSWDLQDKTFVALKIVKSDQVY---------------------------ADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 43 ~V~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
.||.|... .+..+|+|+.+..... .....+|...|..+....
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~G---------- 69 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAG---------- 69 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT----------
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCC----------
Confidence 37888664 5678999987531100 123356888888885432
Q ss_pred ccccceeccccceeecCCCeEEEEEEeecc--ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH-hhhcCCeeeccCCC
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY-LHTQCRIIHTDIKP 172 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~-lH~~~~i~H~dlkp 172 (393)
-++++.++.- .-++||||++ |..+..+.... ++.+....++.+++..+.. +|.. |++|+||.+
T Consensus 70 --v~vP~p~~~~--------~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~-givHGDLs~ 135 (188)
T PF01163_consen 70 --VPVPKPYDYN--------RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKA-GIVHGDLSE 135 (188)
T ss_dssp ---SS--EEEEE--------TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCT-TEEESS-ST
T ss_pred --ccCCcEEEEe--------CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhc-CceecCCCh
Confidence 1233333221 1469999997 65554444432 2245667788888886666 4665 999999999
Q ss_pred CceEEeech
Q psy12288 173 ENILMCVDY 181 (393)
Q Consensus 173 ~NIl~~~~~ 181 (393)
.||+++.+.
T Consensus 136 ~NIlv~~~~ 144 (188)
T PF01163_consen 136 YNILVDDGK 144 (188)
T ss_dssp TSEEEETTC
T ss_pred hhEEeecce
Confidence 999997663
No 446
>KOG3741|consensus
Probab=98.82 E-value=3.6e-07 Score=86.84 Aligned_cols=169 Identities=16% Similarity=0.190 Sum_probs=125.2
Q ss_pred ceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEEEE
Q psy12288 41 FSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICM 119 (393)
Q Consensus 41 ~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i 119 (393)
..+.|+|+...+|..+++|+++... ......-.-++..+++ .|.|++++.++|....-.+..+++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl--------------~h~NvV~frevf~t~tF~D~Slvl 354 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL--------------CHTNVVPFREVFLTYTFGDLSLVL 354 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHh--------------ccCceeehhhhhhhhccCcceEEE
Confidence 3578999999999999999985332 1223445567788888 899999999999866667788999
Q ss_pred EEeec--cccHHHHHHhc-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 120 VFEVM--GYNLLRLIARS-------------DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 120 v~e~~--~~~l~~~~~~~-------------~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
|++|. .++|.++.-.. .+...++..++.++.|+..||.++|+. |+..+-|.+.+|+++.+.
T Consensus 355 vYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss-GLAck~L~~~kIlv~G~~--- 430 (655)
T KOG3741|consen 355 VYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS-GLACKTLDLKKILVTGKM--- 430 (655)
T ss_pred EEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc-CceeecccHhHeEeeCcc---
Confidence 99998 45676655321 123366889999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
+++++..|..-...... . +.+.+ -..
T Consensus 431 ----------------------------------------RIriS~C~i~Dvl~~d~---------~--~~le~---~Qq 456 (655)
T KOG3741|consen 431 ----------------------------------------RIRISGCGIMDVLQEDP---------T--EPLES---QQQ 456 (655)
T ss_pred ----------------------------------------eEEEecccceeeecCCC---------C--cchhH---Hhh
Confidence 47776655433221111 0 11111 246
Q ss_pred hhHHhHHHHHHHHHhCC
Q psy12288 265 ADIWSTACMAFELATGD 281 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~ 281 (393)
-|.-.||.+++.|.+|.
T Consensus 457 ~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 457 NDLRDLGLLLLALATGT 473 (655)
T ss_pred hhHHHHHHHHHHHhhcc
Confidence 79999999999999984
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.82 E-value=3.5e-08 Score=81.99 Aligned_cols=118 Identities=16% Similarity=0.197 Sum_probs=76.2
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEE-Eeccc--------ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKI-VKSDQ--------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~-~~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.+++|+-+.++.+... |..+++|. .++.- ....+..+|..++..+..... ..| -++
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV---------~~P---~v~ 67 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGV---------PVP---IVY 67 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCC---------CCC---eEE
Confidence 45789999999998553 44477774 22211 112445678888888754321 122 122
Q ss_pred ccceeecCCCeEEEEEEeeccccHHH-HHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~-~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++ +.+.-.|+|||++|.++. .+... ...++..+-.-+.-||.. ||+|+||.++||++..+.
T Consensus 68 dv------D~~~~~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~-givHGDLTtsNiIl~~~~ 129 (204)
T COG3642 68 DV------DPDNGLIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKA-GIVHGDLTTSNIILSGGR 129 (204)
T ss_pred EE------cCCCCEEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc-CeecCCCccceEEEeCCc
Confidence 11 233357999999776666 44332 134566666778889998 999999999999997654
No 448
>KOG2137|consensus
Probab=98.79 E-value=1.7e-09 Score=105.74 Aligned_cols=152 Identities=18% Similarity=0.310 Sum_probs=109.3
Q ss_pred HHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEee
Q psy12288 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230 (393)
Q Consensus 151 ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~d 230 (393)
++..|+.|+|...++||++|.|++|.++.++ .+|++.
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~-------------------------------------------~wkl~G 143 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANG-------------------------------------------DWKLAG 143 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCc-------------------------------------------ceeecc
Confidence 3448999999988899999999999998777 389999
Q ss_pred cCccccccCCCC------------CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHH-hCCCCCCCCCCCCCCCcHH
Q psy12288 231 LGNACWIDDHFA------------DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELA-TGDYLFDPKAGKEYSRDDD 297 (393)
Q Consensus 231 fg~~~~~~~~~~------------~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell-~g~~pf~~~~~~~~~~~~~ 297 (393)
|+.+........ -......|.|||++.....+.++|++|+||++|-+. .|+..+...+...++.
T Consensus 144 f~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~--- 220 (700)
T KOG2137|consen 144 FSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS--- 220 (700)
T ss_pred chhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhh---
Confidence 987654322110 012245799999999977899999999999999998 5776665443221110
Q ss_pred HHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH
Q psy12288 298 HLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377 (393)
Q Consensus 298 ~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 377 (393)
.....+.. .....+...+.++.+-+.++|..++..||++
T Consensus 221 ----~~~~~~~~-------------------------------------~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~ 259 (700)
T KOG2137|consen 221 ----FSRNLLNA-------------------------------------GAFGYSNNLPSELRESLKKLLNGDSAVRPTL 259 (700)
T ss_pred ----hhhccccc-------------------------------------ccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence 00000000 0011224566788899999999999999999
Q ss_pred HHHhcCCCCCCC
Q psy12288 378 ADCLRHPWLNPR 389 (393)
Q Consensus 378 ~ell~hp~~~~~ 389 (393)
.+++..|||.+.
T Consensus 260 ~~l~~~~ff~D~ 271 (700)
T KOG2137|consen 260 DLLLSIPFFSDP 271 (700)
T ss_pred hhhhcccccCCc
Confidence 999999999874
No 449
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.74 E-value=9.8e-08 Score=84.15 Aligned_cols=111 Identities=18% Similarity=0.127 Sum_probs=67.5
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
+.|+.|.++.||++.... |+.+++|+...... ....+..|..+++.+.... ..+++++.......
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~------------~~vp~~~~~~~~~~ 70 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTG------------VPVPKVLALCEDPS 70 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCC------------CCCCCEEEECCCCC
Confidence 678999999999997643 57899998765433 3567889999999995421 11233333322100
Q ss_pred CCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 112 RNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 112 ~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
..+..+++||++.| ++...+.. ..++.+....++.+++.+|+.||+
T Consensus 71 -~~~~~~~v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~ 117 (223)
T cd05154 71 -VLGTPFYVMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHS 117 (223)
T ss_pred -ccCCceEEEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhC
Confidence 11356899999944 33332211 124555555666666666666663
No 450
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.66 E-value=2.8e-07 Score=80.37 Aligned_cols=126 Identities=21% Similarity=0.255 Sum_probs=82.1
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchh-------------------------hHHHHHHHHHhcccCCC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADT-------------------------ARDEIVLLKAVGRKSNV 87 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-------------------------~~~E~~~l~~l~~~~~~ 87 (393)
...|.+|.-+.||+|.. .++..+|+|+++........ ..+|+.-|+++...
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA--- 128 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA--- 128 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc---
Confidence 34777888889999955 46788999998753322111 12366666666432
Q ss_pred CcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
+-.+++.+..+. ..+|||++|..-... .....-++..+++..+..+++..+.-|...+++||
T Consensus 129 ---------GVrvP~Pi~~~~--------nVLvMEfIg~~g~pA-P~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVH 190 (268)
T COG1718 129 ---------GVRVPEPIAFRN--------NVLVMEFIGDDGLPA-PRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVH 190 (268)
T ss_pred ---------CCCCCCceeecC--------CeEEEEeccCCCCCC-CCcccCCcCchhHHHHHHHHHHHHHHHHHhcCccc
Confidence 223344444333 579999996551111 01111123444688899999999999998569999
Q ss_pred ccCCCCceEEeec
Q psy12288 168 TDIKPENILMCVD 180 (393)
Q Consensus 168 ~dlkp~NIl~~~~ 180 (393)
+||+.=|||+..+
T Consensus 191 gDLSEyNiL~~~~ 203 (268)
T COG1718 191 GDLSEYNILVHDG 203 (268)
T ss_pred ccchhhheEEECC
Confidence 9999999999843
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.64 E-value=1.1e-06 Score=79.58 Aligned_cols=121 Identities=13% Similarity=-0.030 Sum_probs=76.9
Q ss_pred EEEEEeCCCCceEEEEEEeccc------------ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee-e
Q psy12288 44 VWLSWDLQDKTFVALKIVKSDQ------------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI-Y 110 (393)
Q Consensus 44 V~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 110 (393)
|.++.. .|+.+.||...... .....+.+|...+..+..... .. ++.+..... .
T Consensus 38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GI---------pt---P~pVa~~e~~~ 103 (268)
T PRK15123 38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGV---------DT---MTGVAFGERGS 103 (268)
T ss_pred EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCC---------CC---CCeeEEEEecC
Confidence 445432 45678888664321 011136788888888854321 11 222222221 1
Q ss_pred cCCCeEEEEEEeeccc--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 111 SRNGTHICMVFEVMGY--NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 111 ~~~~~~~~iv~e~~~~--~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+.....-++|||++++ ++.+++........+......++.+++..++-||.. |++|+|+++.|||++.
T Consensus 104 ~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~-Gi~HgDL~~~NiLl~~ 173 (268)
T PRK15123 104 NPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA-GINHRDCYICHFLLHL 173 (268)
T ss_pred CCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC-cCccCCCChhhEEEec
Confidence 1113356799999955 566666432223355677788999999999999998 9999999999999975
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.52 E-value=6.1e-07 Score=79.16 Aligned_cols=125 Identities=24% Similarity=0.248 Sum_probs=82.7
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-----------------------cccchhhHHHHHHHHHhcccCC
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-----------------------QVYADTARDEIVLLKAVGRKSN 86 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------------------~~~~~~~~~E~~~l~~l~~~~~ 86 (393)
+.+...||-|.-+.||.|.+. .|.++|||+-... .......++|..+|..+....
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G- 170 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG- 170 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC-
Confidence 567899999999999999776 6778999974311 011234567888999884331
Q ss_pred CCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
-.+++.+ ..+..++|||++.|..+.... +..+....++..|+.-+.-+... |++
T Consensus 171 -----------~~VP~P~--------~~nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~-GiV 224 (304)
T COG0478 171 -----------VKVPKPI--------AWNRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRR-GIV 224 (304)
T ss_pred -----------CCCCCcc--------ccccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHc-Ccc
Confidence 1122222 345578999999664332221 22344444555555556555555 999
Q ss_pred eccCCCCceEEeechh
Q psy12288 167 HTDIKPENILMCVDYD 182 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~ 182 (393)
|+|+++=||+++.|+.
T Consensus 225 HGDlSefNIlV~~dg~ 240 (304)
T COG0478 225 HGDLSEFNILVTEDGD 240 (304)
T ss_pred ccCCchheEEEecCCC
Confidence 9999999999999874
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.50 E-value=4.6e-06 Score=71.81 Aligned_cols=130 Identities=13% Similarity=0.038 Sum_probs=88.8
Q ss_pred cccCceEEEEEEeCCCCceEEEEEEec----c---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 37 GWGHFSTVWLSWDLQDKTFVALKIVKS----D---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 37 g~G~~g~V~~~~~~~~~~~vaiK~~~~----~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
|+||-+-|++.... |+.+=+|.-.+ + +.-...+.+|+..++.+.... .| +++....-..
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~G-----------vP-VP~pvf~~~~ 92 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAG-----------VI-VPKIVFGEAV 92 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcC-----------CC-CCccceeeee
Confidence 55888888887543 33566775431 1 334577899999999985542 22 3333311111
Q ss_pred ecCCCeEEEEEEeecc--ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 110 YSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
..+.....+||+|-++ .+|.+.+........+......+..+++..++-||+. |+.|+|+-+.||+++.++
T Consensus 93 k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~-Gv~Hgdly~khIll~~~g 165 (216)
T PRK09902 93 KIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV-NRQHGCCYVRHIYVKTEG 165 (216)
T ss_pred ccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHhheeecCCC
Confidence 1223445789999886 5777776554434456777789999999999999998 999999999999997443
No 454
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.34 E-value=2.9e-06 Score=78.93 Aligned_cols=191 Identities=13% Similarity=0.115 Sum_probs=122.1
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccccccee----ccccce
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR----LLNDFK 108 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~----~~~~~~ 108 (393)
..-||+|+-+.+|..-.. +.. +.|++...+. ..-.+.+..|...- .|+.+.. ... .
T Consensus 16 gr~LgqGgea~ly~l~e~--~d~-VAKIYh~Ppp--a~~aqk~a~la~~p-------------~~p~~~~rvaWPqa--~ 75 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV--RDQ-VAKIYHAPPP--AAQAQKVAELAATP-------------DAPLLNYRVAWPQA--T 75 (637)
T ss_pred CccccCCccceeeecchh--hch-hheeecCCCc--hHHHHHHHHhccCC-------------CCcchhhhhcccHH--H
Confidence 467899999999976332 223 3477764331 11222333333332 2222111 111 1
Q ss_pred eecCCCeE-EEEEEeeccc--cHHHHH----HhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 109 IYSRNGTH-ICMVFEVMGY--NLLRLI----ARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 109 ~~~~~~~~-~~iv~e~~~~--~l~~~~----~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+... .-+.|+.+.+ ....+. .+.......++...+..+.++.+.+.||+. |.+-+|+.++|+|+++++
T Consensus 76 L~G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~-Gh~vGDVn~~~~lVsd~~ 154 (637)
T COG4248 76 LHGGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH-GHVVGDVNQNSFLVSDDS 154 (637)
T ss_pred hhCCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc-CCcccccCccceeeecCc
Confidence 13333333 5677887733 222221 122334467888999999999999999998 999999999999999887
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccc--ccCCCCCCCCCCCCchhHHHhc-
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW--IDDHFADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~--~~~~~~~~~~t~~y~aPE~~~~- 258 (393)
. +.|.|-..-.. .+......+|...|.+||...-
T Consensus 155 ~-------------------------------------------V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~ 191 (637)
T COG4248 155 K-------------------------------------------VVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLP 191 (637)
T ss_pred e-------------------------------------------EEEEcccceeeccCCceEecccCccccCCHHHhccc
Confidence 3 77777543221 1223445678999999998762
Q ss_pred ----CCCCchhhHHhHHHHHHHHHhC-CCCCCCC
Q psy12288 259 ----AGYGPAADIWSTACMAFELATG-DYLFDPK 287 (393)
Q Consensus 259 ----~~~~~~~DiwSlG~~l~ell~g-~~pf~~~ 287 (393)
..-+...|.+.||+++++++.| +.||.+.
T Consensus 192 sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 192 SFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred cccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 2346789999999999999986 8999654
No 455
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.27 E-value=6.7e-06 Score=71.77 Aligned_cols=99 Identities=18% Similarity=0.201 Sum_probs=68.6
Q ss_pred chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccc--cHHHHHHhcCCCCCCHHHH
Q psy12288 68 ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY--NLLRLIARSDYKGIHIQNV 145 (393)
Q Consensus 68 ~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~--~l~~~~~~~~~~~l~~~~~ 145 (393)
..+..+|...+..+..... .+++.+.............++|+|.+.+ +|.+.+..... .+....
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi------------~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~ 120 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGI------------PTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQR 120 (206)
T ss_pred chHHHHHHHHHHHHHHcCC------------CCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhH
Confidence 4567788888888754321 1233333333221122456899999943 56666654322 556777
Q ss_pred HHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 146 ~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
..++.++...++-||+. |++|+|+++.|||++.+.
T Consensus 121 ~~ll~~l~~~i~~lH~~-gi~H~Dl~~~NILv~~~~ 155 (206)
T PF06293_consen 121 RELLRALARLIAKLHDA-GIYHGDLNPSNILVDPDD 155 (206)
T ss_pred HHHHHHHHHHHHHHHHC-cCCCCCCCcccEEEeCCC
Confidence 88999999999999998 999999999999998765
No 456
>KOG0576|consensus
Probab=98.17 E-value=2.6e-07 Score=89.83 Aligned_cols=258 Identities=18% Similarity=0.156 Sum_probs=163.8
Q ss_pred CCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 14 PGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
+++|.|..+.|-- .-|.....+++|+++.+++.+...+...+ .+++... ....-++++|.++
T Consensus 229 kS~~qpp~lkDk~-kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~------------ 290 (829)
T KOG0576|consen 229 KSGFQPPTLKDKT-KWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKV------------ 290 (829)
T ss_pred ccCCCCCcccCCc-cchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHc------------
Confidence 3556666665532 24566677899999999998776555444 5655432 4556788889998
Q ss_pred Cccccc-ceeccccceeecCCCeEEEEEEeecccc--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 94 TQASEK-VIRLLNDFKIYSRNGTHICMVFEVMGYN--LLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 94 ~~~~~~-i~~~~~~~~~~~~~~~~~~iv~e~~~~~--l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
+||| .+..++... ...+.++.++++++. ......... -.+..-++..+.+.-+++++++|+. -=+|+|
T Consensus 291 --n~P~~~v~~~~d~~----~E~~~~i~~~i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~-~~~~~d- 361 (829)
T KOG0576|consen 291 --NNPNPVVRYLEDYD----GEDYLWIPMRICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSS-YKVHRD- 361 (829)
T ss_pred --cCCCCcccccccCC----cccccchhhhhhcCCccccccCChhh-Hhhhhhhhhhhhhhhcccccccccc-cccCcc-
Confidence 6666 444444443 567889999999433 332221111 1133334555677777888999975 457887
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTR 248 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~ 248 (393)
||+..... .++.+|+....+... .....+++
T Consensus 362 ---~~l~s~~~--------------------------------------------~~~~~~~v~~~L~~~~~~~t~~~~~ 394 (829)
T KOG0576|consen 362 ---NILGSEEE--------------------------------------------VKLLDFAVPPQLTRTMKPRTAIGTP 394 (829)
T ss_pred ---cccccccc--------------------------------------------cccccccCCcccCcccccccCCCCC
Confidence 77764432 778899887766544 44567899
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCC-hHHHhcCcccccccCCC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP-KEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p-~~~~~~~~~~~~~~~~~ 327 (393)
.+++||+.....+....|+|++|+--.++.-|.+|-....... ...|.-| ...+.....
T Consensus 395 ~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~~------------~~~g~~p~s~~L~~~~a-------- 454 (829)
T KOG0576|consen 395 EPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAVL------------PMIGNGPNSPMLTDKSA-------- 454 (829)
T ss_pred CCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCcccc------------CCCCCCCCccccchhhh--------
Confidence 9999999999999999999999987777777766553211000 0001111 000000000
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
+...... ++-..|+.--|..|+....++-|.+|+.|.-
T Consensus 455 -----------------------w~~~~~~---~~~~~~~~g~P~~pkv~mgacfsKvfngCpl 492 (829)
T KOG0576|consen 455 -----------------------WSPVFHR---DFPAPCLNGLPPTPKVHMGACFSKVFNGCPL 492 (829)
T ss_pred -----------------------cCccccc---CCcccccCCCCCCCcchhhHHHHHHhccCcc
Confidence 0000000 4678899999999999999999999998753
No 457
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.00 E-value=4.1e-05 Score=66.31 Aligned_cols=133 Identities=16% Similarity=0.143 Sum_probs=75.8
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccch----------hhHHHHHHHHHhcccCCCCcccccC
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD----------TARDEIVLLKAVGRKSNVHSSAYNT 94 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~E~~~l~~l~~~~~~~~~~~~~ 94 (393)
.++.+|.+.+++-......|.+. ...++.+++|.........+ ...+.+.-+..+....
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g--------- 96 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEG--------- 96 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcC---------
Confidence 45678999999988887777666 33567888997664321111 1122333233331111
Q ss_pred cccccceeccc-cceeecCCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 95 QASEKVIRLLN-DFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 95 ~~~~~i~~~~~-~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
......++- .-.-...-....+++|||+.| .+.+... +.+ .+...+..++.-+|+. |++|+|..|
T Consensus 97 --~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~-G~~HGD~hp 163 (229)
T PF06176_consen 97 --FTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKH-GFYHGDPHP 163 (229)
T ss_pred --ccccccceeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHc-CCccCCCCc
Confidence 111111000 000011123446789999954 4443321 222 2345566778999998 999999999
Q ss_pred CceEEeech
Q psy12288 173 ENILMCVDY 181 (393)
Q Consensus 173 ~NIl~~~~~ 181 (393)
.|++++.++
T Consensus 164 gNFlv~~~~ 172 (229)
T PF06176_consen 164 GNFLVSNNG 172 (229)
T ss_pred CcEEEECCc
Confidence 999998665
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.99 E-value=1.3e-05 Score=78.72 Aligned_cols=137 Identities=16% Similarity=0.178 Sum_probs=71.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCc------------------------
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS------------------------ 89 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~------------------------ 89 (393)
+-|+.++-|.||+|+... |+.||||+...+ ..+.+...+.+|+.+..--....
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPg--i~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElD 207 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPG--IRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELD 207 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCC--hHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhC
Confidence 578899999999997764 999999997642 22333333333332211100000
Q ss_pred ----------ccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q psy12288 90 ----------SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158 (393)
Q Consensus 90 ----------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~ 158 (393)
..-...+.+.+ ++-.++- .-.+.-+++|||+ |..+.+...... .+++.+.+.....++..---+
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v-~VP~V~w---e~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~~q~~ 282 (517)
T COG0661 208 YRREAANAERFRENFKDDPDV-YVPKVYW---EYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFLRQLL 282 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCe-Eeceeeh---hccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHHHHHH
Confidence 00000011211 1111111 1233468999999 445444432221 335544443333322222222
Q ss_pred hhhcCCeeeccCCCCceEEeech
Q psy12288 159 LHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 159 lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
- . |..|.|..|.||+++.++
T Consensus 283 ~--d-gffHaDpHpGNi~v~~~g 302 (517)
T COG0661 283 R--D-GFFHADPHPGNILVRSDG 302 (517)
T ss_pred h--c-CccccCCCccceEEecCC
Confidence 2 3 999999999999998886
No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.71 E-value=0.00052 Score=60.74 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=45.7
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCC
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRN 113 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 113 (393)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..... ..| +.+.... .
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~gl---------pvP---~~~~~~~----~ 65 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGI---------PTP---HPFDLVE----D 65 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCC---------CCC---ceEEEEe----c
Confidence 67899999999984 24457788876432 34567899999999853221 112 2222222 3
Q ss_pred CeEEEEEEeeccc
Q psy12288 114 GTHICMVFEVMGY 126 (393)
Q Consensus 114 ~~~~~iv~e~~~~ 126 (393)
+....++||++.|
T Consensus 66 ~~~~glv~e~i~G 78 (226)
T TIGR02172 66 GGRLGLIYELIVG 78 (226)
T ss_pred CCeeeeeeeecCC
Confidence 3346689999955
No 460
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.68 E-value=0.0002 Score=59.46 Aligned_cols=115 Identities=20% Similarity=0.154 Sum_probs=72.0
Q ss_pred EEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 31 HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
++.+.|++|++|.||+|.+. +..+|+|+-.. +.....+..|..+|..+...... ++++..-
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~~~-------------p~vy~yg--- 85 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR--GGEVALKVRRR-DSPRRNLEKEAKILEILAGEGVT-------------PEVYFYG--- 85 (201)
T ss_pred hhhhhhhcccccEEEEeecc--CceEEEEEecC-CcchhhHHHHHHHHHHhhhcCCC-------------ceEEEec---
Confidence 46778999999999999764 55899996543 45678889999999998433211 1222111
Q ss_pred cCCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC--CceEEee
Q psy12288 111 SRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP--ENILMCV 179 (393)
Q Consensus 111 ~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp--~NIl~~~ 179 (393)
.-++.|||+.| .|....... ..+. ...+++. +|.=+..||-|+.|.- .|+++..
T Consensus 86 -----~~~i~me~i~G~~L~~~~~~~-----~rk~----l~~vlE~-a~~LD~~GI~H~El~~~~k~vlv~~ 142 (201)
T COG2112 86 -----EDFIRMEYIDGRPLGKLEIGG-----DRKH----LLRVLEK-AYKLDRLGIEHGELSRPWKNVLVND 142 (201)
T ss_pred -----hhhhhhhhhcCcchhhhhhcc-----cHHH----HHHHHHH-HHHHHHhccchhhhcCCceeEEecC
Confidence 13455999955 665554321 1222 2334444 3333344999999986 5676644
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.58 E-value=0.00096 Score=58.93 Aligned_cols=78 Identities=19% Similarity=0.123 Sum_probs=51.1
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
++.++.|..+.||++.... ..+++|+.... ........|..+++.+..... .+++++... ....
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~------------pvP~~~~~~-~~~~ 65 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGI------------PVPRVLAFD-TSDE 65 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTS------------BS--EEEEE-EETE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCC------------CCceEEeec-cccc
Confidence 4788999999999997765 47889987654 345677899999988854321 123333321 1112
Q ss_pred CCeEEEEEEeeccc
Q psy12288 113 NGTHICMVFEVMGY 126 (393)
Q Consensus 113 ~~~~~~iv~e~~~~ 126 (393)
.....+++|+++.|
T Consensus 66 ~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 66 FNGFPYLLMEYIPG 79 (239)
T ss_dssp ETSEEEEEEEEESS
T ss_pred ccccceEEEEEecc
Confidence 33458899999844
No 462
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.57 E-value=0.0013 Score=56.42 Aligned_cols=122 Identities=22% Similarity=0.261 Sum_probs=80.1
Q ss_pred CCeEEEEEEecccCc-eEEEEEEeCCCCceEEEEEEec----cc------------------ccchhhHHHHHHHHHhcc
Q psy12288 27 NFRYHVIRKLGWGHF-STVWLSWDLQDKTFVALKIVKS----DQ------------------VYADTARDEIVLLKAVGR 83 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~----~~------------------~~~~~~~~E~~~l~~l~~ 83 (393)
+.+++.++.||.|+- |.||+++. .|+.+|+|++.. .. ....-+..|.++..++..
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 478999999999999 99999965 577999999431 00 122345667777776654
Q ss_pred cCCCCcccccCcccccc--eeccccceeec--------------CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHH
Q psy12288 84 KSNVHSSAYNTQASEKV--IRLLNDFKIYS--------------RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147 (393)
Q Consensus 84 ~~~~~~~~~~~~~~~~i--~~~~~~~~~~~--------------~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~ 147 (393)
.. ++.+ +++++.+.+.. .......||.|+....- .+..+.
T Consensus 114 ~~-----------~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~~--- 169 (207)
T PF13095_consen 114 AG-----------REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIRD--- 169 (207)
T ss_pred cc-----------ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchhH---
Confidence 32 2233 45555443321 22334567888763332 133333
Q ss_pred HHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 148 IIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 148 i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+.+++.-+..+|.. ||+-+|+++.|..
T Consensus 170 -~~~~~~dl~~~~k~-gI~~~Dv~~~ny~ 196 (207)
T PF13095_consen 170 -IPQMLRDLKILHKL-GIVPRDVKPRNYR 196 (207)
T ss_pred -HHHHHHHHHHHHHC-CeeeccCcccccc
Confidence 35566778889986 9999999999996
No 463
>KOG2270|consensus
Probab=97.52 E-value=0.00077 Score=62.45 Aligned_cols=127 Identities=18% Similarity=0.234 Sum_probs=82.5
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----------------------c---hhh--HHHHHHHHHhccc
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----------------------A---DTA--RDEIVLLKAVGRK 84 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------------------~---~~~--~~E~~~l~~l~~~ 84 (393)
+-..|..|.-+.||.|.. .+|..+|||+++.+-.. . -.. ..|.+-|+++...
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 446788899999999844 46777999998642100 0 111 2366666666333
Q ss_pred CCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
.. .+|-.+- -...++||+++|.+-+..-.-. .-.++...+..+-.|++.-+..|...|+
T Consensus 227 GI---------P~PePIl-----------Lk~hVLVM~FlGrdgw~aPkLK-d~~ls~~ka~~~Y~~~v~~MR~lY~~c~ 285 (520)
T KOG2270|consen 227 GI---------PCPEPIL-----------LKNHVLVMEFLGRDGWAAPKLK-DASLSTSKARELYQQCVRIMRRLYQKCR 285 (520)
T ss_pred CC---------CCCCcee-----------eecceEeeeeccCCCCcCcccc-cccCChHHHHHHHHHHHHHHHHHHHHhc
Confidence 21 1111100 0125799999975433322111 1237777888899999999999999999
Q ss_pred eeeccCCCCceEEeec
Q psy12288 165 IIHTDIKPENILMCVD 180 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~ 180 (393)
+||.||+-=|+|+-.+
T Consensus 286 LVHADLSEfN~LyhdG 301 (520)
T KOG2270|consen 286 LVHADLSEFNLLYHDG 301 (520)
T ss_pred eeccchhhhhheEECC
Confidence 9999999999998544
No 464
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.44 E-value=0.0018 Score=57.91 Aligned_cols=71 Identities=15% Similarity=0.050 Sum_probs=44.2
Q ss_pred EecccCc-eEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCC
Q psy12288 35 KLGWGHF-STVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRN 113 (393)
Q Consensus 35 ~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 113 (393)
.|-.|.+ +.||++... +..+.+|+..... .....+|+.+++.+... .-+++++.... .
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~-------------~~vP~v~~~~~----~ 63 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK-------------LPVPEVIDYGS----D 63 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc-------------CCCCeEEEEEe----c
Confidence 3444554 678998543 3568888776433 45678899999998532 11233343332 2
Q ss_pred CeEEEEEEeeccc
Q psy12288 114 GTHICMVFEVMGY 126 (393)
Q Consensus 114 ~~~~~iv~e~~~~ 126 (393)
++..++||+++.|
T Consensus 64 ~~~~~lv~e~i~G 76 (244)
T cd05150 64 DGRAWLLTSAVPG 76 (244)
T ss_pred CCccEEEEEeeCC
Confidence 3457889999844
No 465
>KOG1035|consensus
Probab=97.35 E-value=0.00033 Score=73.31 Aligned_cols=162 Identities=21% Similarity=0.341 Sum_probs=99.0
Q ss_pred ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC---ceEEeechhHHhHhhhhhhcccccCCcCC
Q psy12288 126 YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE---NILMCVDYDKVRRMARDATKHHKIGMKLP 202 (393)
Q Consensus 126 ~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~---NIl~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (393)
.++...+..- ...+.+..+.+..++.+|++++|+. .+.|.-+..+ +-.++.++
T Consensus 271 ~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h~~-~l~~v~L~~s~~~~~~~~~e~--------------------- 326 (1351)
T KOG1035|consen 271 VELRSLLQSV--GSIPLETLRILHQKLLEGLAYLHSL-SLEHVVLSASSSKESTVDGEG--------------------- 326 (1351)
T ss_pred cchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHHHh-ccceeEEecccccccccCccc---------------------
Confidence 3444444333 3477889999999999999999986 4444433333 11111111
Q ss_pred CCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC--CCCCCCCCchhHHHhcCCC--CchhhHHhHHHHHHHHH
Q psy12288 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQTRQYRSVEVLIGAGY--GPAADIWSTACMAFELA 278 (393)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~--~~~~DiwSlG~~l~ell 278 (393)
.....+.||+.+..+..... ....+..+.++|....... ....|+|.+|.++..+.
T Consensus 327 --------------------~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~ 386 (1351)
T KOG1035|consen 327 --------------------VVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLS 386 (1351)
T ss_pred --------------------eeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhh
Confidence 11233447776665543322 2233556677777766544 44579999999999998
Q ss_pred hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHH
Q psy12288 279 TGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASD 358 (393)
Q Consensus 279 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (393)
.|..+-.-.. .+..+.. ......
T Consensus 387 ~~~~i~~~~~--------------------~~~~~l~-------------------------------------~~~~~~ 409 (1351)
T KOG1035|consen 387 QGEDISEKSA--------------------VPVSLLD-------------------------------------VLSTSE 409 (1351)
T ss_pred hcCccccccc--------------------chhhhhc-------------------------------------cccchh
Confidence 8754321000 0111100 011114
Q ss_pred HHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 359 FADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 359 ~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+...+|+.-++++|+++.+++.|||.+.
T Consensus 410 ~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 410 LLDALPKCLDEDSEERLSALELLTHPFLRF 439 (1351)
T ss_pred hhhhhhhhcchhhhhccchhhhhhchhccc
Confidence 568889999999999999999999999864
No 466
>KOG1235|consensus
Probab=97.26 E-value=0.0021 Score=63.38 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=71.7
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc--------------------------------ccchhhHHHHHHHHHh
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--------------------------------VYADTARDEIVLLKAV 81 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------------------------~~~~~~~~E~~~l~~l 81 (393)
+-||..+.|.|++|+.+. |+.||||+-+..- .....+..|+..++.-
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 578999999999998876 9999999865310 0012222233333222
Q ss_pred cccCCCCcccccCccccc---ceeccccceeecCCCeEEEEEEeeccc---cHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q psy12288 82 GRKSNVHSSAYNTQASEK---VIRLLNDFKIYSRNGTHICMVFEVMGY---NLLRLIARSDYKGIHIQNVRTIIKQVLEG 155 (393)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~iv~e~~~~---~l~~~~~~~~~~~l~~~~~~~i~~ql~~~ 155 (393)
.....+.... .+-+ -+.+-.++. .-...-+++|||+.| +-.+.+.+.. ++...+..-..+...-
T Consensus 246 ~Nae~~~~~f----~~~~~~~~V~VP~Vy~---~~st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~~~ 315 (538)
T KOG1235|consen 246 KNAERFRENF----KDFSLLTYVLVPKVYW---DLSTKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAYLE 315 (538)
T ss_pred HhHHHHHHHH----HhcccccceeCCeehh---hcCcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHHHH
Confidence 1111000000 1111 111222222 122347899999943 3345555543 6666554444443333
Q ss_pred HHHhhhcCCeeeccCCCCceEEeec
Q psy12288 156 LNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 156 l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
.-+- . |.+|+|=.|-||+++.+
T Consensus 316 qIf~--~-GffHaDPHPGNilv~~~ 337 (538)
T KOG1235|consen 316 QIFK--T-GFFHADPHPGNILVRPN 337 (538)
T ss_pred HHHh--c-CCccCCCCCCcEEEecC
Confidence 3333 3 99999999999999754
No 467
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.24 E-value=0.011 Score=50.89 Aligned_cols=125 Identities=18% Similarity=0.283 Sum_probs=83.4
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc-----------------ccchhhHHHHHHHHHhc-ccCCCCcccccCc
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-----------------VYADTARDEIVLLKAVG-RKSNVHSSAYNTQ 95 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~ 95 (393)
..||+|+.-.||. |+.+ ...+||+..... .......+|+.....+. ... .
T Consensus 7 ~~i~~G~~R~cy~--HP~d-p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~---------~ 74 (199)
T PF10707_consen 7 DLIAQGGERDCYQ--HPDD-PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRG---------V 74 (199)
T ss_pred cccccCCCceEEE--CCCC-CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccC---------C
Confidence 5689999998986 3433 346789887543 22355677888877776 322 2
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec---c----ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM---G----YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~---~----~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.+.++.++++... .+...-+|+|.+ . .+|.+++... .++. .....+. .-..+|-++ +|+.+
T Consensus 75 ~~~~i~r~~G~ve----T~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~~~~L~---~f~~~l~~~-~Iv~~ 142 (199)
T PF10707_consen 75 DWSHIPRFYGFVE----TNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-ELRQALD---EFKRYLLDH-HIVIR 142 (199)
T ss_pred cccccccEeEEEe----cCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HHHHHHH---HHHHHHHHc-CCeec
Confidence 5677888888877 555678888877 2 2566666443 2444 4443333 344566666 89999
Q ss_pred cCCCCceEEeechh
Q psy12288 169 DIKPENILMCVDYD 182 (393)
Q Consensus 169 dlkp~NIl~~~~~~ 182 (393)
|++|.||++..+..
T Consensus 143 dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 143 DLNPHNIVVQRRDS 156 (199)
T ss_pred CCCcccEEEEecCC
Confidence 99999999976653
No 468
>PLN02876 acyl-CoA dehydrogenase
Probab=97.12 E-value=0.0081 Score=63.59 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=49.5
Q ss_pred EEEecccCceEEEEEEeCCCC--ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDK--TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++.++.|.++.+|+......+ ..+++|+..... .....+.+|..+++.+.....+ . +++++..+.
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~v--------p---VP~v~~~~~ 111 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDV--------P---VPKVYCLCT 111 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCC--------C---CCcEEEEec
Confidence 678899999999998765432 356677654322 1234678999999999522111 1 223332222
Q ss_pred eecCCCeEEEEEEeecccc
Q psy12288 109 IYSRNGTHICMVFEVMGYN 127 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~~~~ 127 (393)
.. ...+..++|||++.|.
T Consensus 112 d~-~v~G~~flVME~v~G~ 129 (822)
T PLN02876 112 DA-SVIGTAFYIMEYLEGR 129 (822)
T ss_pred CC-CcCCCceEEEEecCCc
Confidence 11 1124578999999654
No 469
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.00 E-value=0.0073 Score=53.77 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=28.7
Q ss_pred EEecccCce-EEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcc
Q psy12288 34 RKLGWGHFS-TVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 34 ~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~ 83 (393)
+.|+.|+.. .||+. +..+++|+.... .....+.+|..+++.+..
T Consensus 3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~-~~~~~~~~E~~~l~~L~~ 47 (235)
T cd05155 3 EPVDSGGTDNATFRL-----GDDMSVRLPSAA-GYAGQVRKEQRWLPRLAP 47 (235)
T ss_pred eeccCCCcccceEEc-----CCceEEEcCCcc-chHHHHHHHHHHHHHHhc
Confidence 456656655 58876 124667865542 234578899999999864
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=96.95 E-value=0.017 Score=51.30 Aligned_cols=52 Identities=8% Similarity=0.113 Sum_probs=35.6
Q ss_pred EEEecccCceEEEEEEeCC-CCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.|..|-.+.+|++.... .++.+++|+............+|..+++.+...
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~ 55 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH 55 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC
Confidence 4667788888999986443 356788997764433333446799999998543
No 471
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.59 E-value=0.043 Score=52.60 Aligned_cols=76 Identities=21% Similarity=0.221 Sum_probs=49.0
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEec------c--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKS------D--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.+.||.|.++.||++....+++.++||.-.. . +...++...|...|+.+.... ...+++++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~-----------p~~VPkV~ 99 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYV-----------PDLVPKVY 99 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhC-----------CCCCCeEE
Confidence 4789999999999998865446799997431 1 123456778888888874321 11233333
Q ss_pred ccceeecCCCeEEEEEEeecc
Q psy12288 105 NDFKIYSRNGTHICMVFEVMG 125 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~ 125 (393)
.. +....++|||++.
T Consensus 100 ~~------D~~~~~lVME~L~ 114 (401)
T PRK09550 100 HY------DEELAVTVMEDLS 114 (401)
T ss_pred EE------CCCCCEEEEecCC
Confidence 32 2233678999983
No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=96.41 E-value=0.019 Score=51.82 Aligned_cols=46 Identities=13% Similarity=0.032 Sum_probs=30.9
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccccc-hhhHHHHHHHHHhcc
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA-DTARDEIVLLKAVGR 83 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~E~~~l~~l~~ 83 (393)
+..|-.+.+|+.. .++..+++|+........ ....+|..+++.+..
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~ 50 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSA 50 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHh
Confidence 4557778889885 456678888755432221 346789999999954
No 473
>PRK05231 homoserine kinase; Provisional
Probab=96.20 E-value=0.16 Score=47.41 Aligned_cols=80 Identities=5% Similarity=-0.003 Sum_probs=44.1
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
++.++.|....+|+.... +| .+++|++.. ........|..+++.+..... ..|.+++-.+.-... .
T Consensus 27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~~--~~~~~l~~~~~~l~~L~~~gl---------pvP~~i~~~~G~~~~-~ 92 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFER--LTAEDLPFFLGLMQHLAARGV---------PVPAPVARRDGAALG-E 92 (319)
T ss_pred cchhccccccceEEEEeC-CC-cEEEEEecc--CChHHhHHHHHHHHHHHHCCC---------CCCcceeCCCCCEee-e
Confidence 345667777789988643 33 578888752 234555667778877754321 223322221111111 1
Q ss_pred CCeEEEEEEeeccc
Q psy12288 113 NGTHICMVFEVMGY 126 (393)
Q Consensus 113 ~~~~~~iv~e~~~~ 126 (393)
.++..+++++++.|
T Consensus 93 ~~g~~~~l~~~l~G 106 (319)
T PRK05231 93 LAGKPAAIVTFLEG 106 (319)
T ss_pred eCCEEEEEEEecCC
Confidence 23457899999844
No 474
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=96.09 E-value=0.018 Score=49.25 Aligned_cols=87 Identities=24% Similarity=0.252 Sum_probs=61.8
Q ss_pred HHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeecc-ccHHHH---HHhcCCCCCCHHHHHH
Q psy12288 72 RDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG-YNLLRL---IARSDYKGIHIQNVRT 147 (393)
Q Consensus 72 ~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~-~~l~~~---~~~~~~~~l~~~~~~~ 147 (393)
..|..+++.+. ..++++++++.+- ..+++|+.+ +++... +.. ....++..+.+
T Consensus 7 ~~E~lll~~l~-------------~~~~~pk~lG~CG--------~~~v~E~~~~~~~~~~~~~l~~--~~~~~w~~R~~ 63 (188)
T PF12260_consen 7 NNEPLLLQLLQ-------------GSEPFPKLLGSCG--------RFYVVEYVGAGSLYGIYRPLSQ--FLQSPWEQRAK 63 (188)
T ss_pred ccHHHHHHHcC-------------CCCCCCCeeeECC--------CEEEEEeecCcccccccccccc--ccccCHHHHHH
Confidence 45777888884 3347788887764 357889985 444311 111 12257889999
Q ss_pred HHHHHHHHHHHhhhcC--CeeeccCCCCceEEeech
Q psy12288 148 IIKQVLEGLNYLHTQC--RIIHTDIKPENILMCVDY 181 (393)
Q Consensus 148 i~~ql~~~l~~lH~~~--~i~H~dlkp~NIl~~~~~ 181 (393)
|+.+++..+.+++... .+.-.|++++|+.++.++
T Consensus 64 iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~ 99 (188)
T PF12260_consen 64 IALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDG 99 (188)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCC
Confidence 9999999999998721 467789999999998776
No 475
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.98 E-value=0.084 Score=49.71 Aligned_cols=49 Identities=22% Similarity=0.257 Sum_probs=34.8
Q ss_pred EecccCceEEEEEEeCCCCceEEEEEEe----c---c-cccchhhHHHHHHHHHhcc
Q psy12288 35 KLGWGHFSTVWLSWDLQDKTFVALKIVK----S---D-QVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~----~---~-~~~~~~~~~E~~~l~~l~~ 83 (393)
.||.|....||++....+++.|+||.-. . + +...++..-|..+|+....
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~ 58 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGE 58 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhc
Confidence 5799999999999876444679999532 1 1 3445666778888887743
No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=95.96 E-value=0.13 Score=47.63 Aligned_cols=53 Identities=13% Similarity=0.153 Sum_probs=37.5
Q ss_pred EEEecccCceEEEEEEeCC------CCceEEEEEEecccccchhhHHHHHHHHHhcccC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ------DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 85 (393)
++.+..|-...+|++.... .++.+++|+............+|..+++.+....
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g 61 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERN 61 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCC
Confidence 3556667777899886543 2578889997765444466788999999986543
No 477
>KOG1093|consensus
Probab=95.92 E-value=0.019 Score=55.77 Aligned_cols=91 Identities=18% Similarity=0.218 Sum_probs=59.1
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
+++||||+|.++.++..|...+.... ..+.+..+.+.. -.+.+...-
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~------~s~~l~~i~k~~-~~d~~~~~~-------------------------- 156 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELT------ESEYLEILLKYY-TDDQELLST-------------------------- 156 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHH------HHHHHHHHHHhc-cCchhHHHH--------------------------
Confidence 49999999999999999987775433 223333333221 111111100
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.. +. .+--..+..+.++..+|+...|..||...++.+++-|..+
T Consensus 157 -a~-e~-~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 157 -AM-EH-LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV 200 (725)
T ss_pred -HH-HH-HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence 00 00 1223556778899999999999999999999999877543
No 478
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=95.92 E-value=0.19 Score=46.59 Aligned_cols=81 Identities=9% Similarity=-0.004 Sum_probs=45.0
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
+..++.|....+|++... ++ .+++|+..... .......|..++..+..... ..+.+++-.+..... .
T Consensus 27 i~~~~~G~~n~~y~v~t~-~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~---------pvp~~i~t~~g~~~~-~ 93 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTD-VG-RYILTLYEKRV-KAEELPFFLALTTHLAARGL---------PVPKPVKSRDGRQLS-T 93 (307)
T ss_pred ccccCCccccceEEEEeC-CC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHCCC---------CCCccccCCCCCeeh-h
Confidence 566777777889988542 33 56788765421 23456677888888754321 122222221111111 1
Q ss_pred CCeEEEEEEeeccc
Q psy12288 113 NGTHICMVFEVMGY 126 (393)
Q Consensus 113 ~~~~~~iv~e~~~~ 126 (393)
.++..+++++++.|
T Consensus 94 ~~g~~~~l~e~i~G 107 (307)
T TIGR00938 94 LAGKPACLVEFLQG 107 (307)
T ss_pred cCCeEEEEEEeCCC
Confidence 23567899999844
No 479
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=95.75 E-value=0.096 Score=48.25 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=33.9
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.+..|....+|+... ++..+++|+... ........|+.+++.+...
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~ 66 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK--VSAEELPFFLALLDHLAER 66 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC--CChHhccHHHHHHHHHHHC
Confidence 56777787788998854 334688898764 2346677889998888543
No 480
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.65 E-value=0.15 Score=47.97 Aligned_cols=53 Identities=9% Similarity=0.143 Sum_probs=35.4
Q ss_pred EEEecccCceEEEEEEeCCC---CceEEEEEEecccccchhhHHHHHHHHHhcccC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 85 (393)
++.|..|=...+|++..... +..|++|+........-...+|..+++.+....
T Consensus 19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~g 74 (330)
T PLN02421 19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAG 74 (330)
T ss_pred EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcC
Confidence 34555577788999865432 237889987654433444578999999986544
No 481
>PLN02236 choline kinase
Probab=95.57 E-value=0.16 Score=48.03 Aligned_cols=54 Identities=15% Similarity=-0.013 Sum_probs=36.4
Q ss_pred EEEEecccCceEEEEEEeCC----CCceEEEEEEecccccchhhHHHHHHHHHhcccC
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQ----DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 85 (393)
-+..+-.|-...+|++.... +++.+++|+........-...+|..+++.+....
T Consensus 40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~g 97 (344)
T PLN02236 40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHG 97 (344)
T ss_pred EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcC
Confidence 34556558888999986432 2467899987654433334478999999986543
No 482
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.44 E-value=0.084 Score=50.33 Aligned_cols=51 Identities=22% Similarity=0.330 Sum_probs=37.5
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEE----ecc---cccchhhHHHHHHHHHhcc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIV----KSD---QVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~----~~~---~~~~~~~~~E~~~l~~l~~ 83 (393)
++.||.|.-..||++.+...++.|+||.- +.. +...++..-|..+|+....
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~ 91 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEE 91 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHh
Confidence 68899999999999987544567899853 211 3345667788899988754
No 483
>KOG2268|consensus
Probab=95.18 E-value=0.0054 Score=56.12 Aligned_cols=123 Identities=21% Similarity=0.313 Sum_probs=76.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----------c-------------ccchhhHHHHHHHHHhcccC
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----------Q-------------VYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~-------------~~~~~~~~E~~~l~~l~~~~ 85 (393)
-|.+...||-|.-+-||.+-+. .|.+.++|+-... . ..+-...+|+..|+.+..+.
T Consensus 93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 3678899999999999999665 4566777742210 0 11123356888888875422
Q ss_pred CCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
. . +++.+ +.+..++|||++ +..+...-. ......+...+..-+.-|-.+ |
T Consensus 172 f---------p---VPkpi--------D~~RH~Vvmelv~g~Pl~~v~~--------v~d~~~ly~~lm~~Iv~la~~-G 222 (465)
T KOG2268|consen 172 F---------P---VPKPI--------DHNRHCVVMELVDGYPLRQVRH--------VEDPPTLYDDLMGLIVRLANH-G 222 (465)
T ss_pred C---------C---CCCcc--------cccceeeHHHhhcccceeeeee--------cCChHHHHHHHHHHHHHHHHc-C
Confidence 1 0 11222 344578899988 444433321 122333444455555566667 9
Q ss_pred eeeccCCCCceEEeech
Q psy12288 165 IIHTDIKPENILMCVDY 181 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~ 181 (393)
++|+|-.-=||++.++.
T Consensus 223 lIHgDFNEFNimv~dd~ 239 (465)
T KOG2268|consen 223 LIHGDFNEFNIMVKDDD 239 (465)
T ss_pred ceecccchheeEEecCC
Confidence 99999999999998776
No 484
>PRK10593 hypothetical protein; Provisional
Probab=94.82 E-value=0.32 Score=44.94 Aligned_cols=109 Identities=12% Similarity=0.125 Sum_probs=69.0
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
-.+.||.|..+.||+.... ++ .+.+|+.+. ......+..|...|+.+..... ..++++++.+.. +
T Consensus 18 ~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~-----------vpVP~V~~~~~~-~ 82 (297)
T PRK10593 18 RVECISEQPYAALWALYDS-QG-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGT-----------VRMPTVYGVMTH-E 82 (297)
T ss_pred eeeecCCccceeEEEEEcC-CC-CEEEEEecc-cccchHHHHHHHHHHHHccCCC-----------CCcCcEEEEecc-C
Confidence 3578999999999998443 23 466787543 2234678999999999954321 123344433321 1
Q ss_pred CCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 112 RNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 112 ~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
...+..++|||++.+ ++.+ . .........+..+++.+++-||..
T Consensus 83 ~~~g~~~LVmE~i~G~~~~~-~------~~~~~~~~~l~~~l~~~La~LH~~ 127 (297)
T PRK10593 83 QSPGPDVLLLERLRGVSVEA-P------ARTPERWEQLKDQIVEGLLAWHRI 127 (297)
T ss_pred CcCCCeEEEEeccCCEecCC-C------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 134558999999954 3332 1 123344566778888999999963
No 485
>PTZ00384 choline kinase; Provisional
Probab=94.70 E-value=0.45 Score=45.57 Aligned_cols=52 Identities=15% Similarity=0.136 Sum_probs=30.9
Q ss_pred EEEecccCceEEEEEEeCCCC-c-----eEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDK-T-----FVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~-~-----~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.|..|-.+.+|++...... . .|.++.........-.-.+|+.+++.+...
T Consensus 55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~ 112 (383)
T PTZ00384 55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDN 112 (383)
T ss_pred EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhC
Confidence 455655888899999654332 2 245444333222233446789999998544
No 486
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=94.51 E-value=0.19 Score=45.96 Aligned_cols=46 Identities=20% Similarity=0.094 Sum_probs=28.4
Q ss_pred cccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 37 GWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 37 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++|-...|+.+ ...+|..+++|+-.. ........+|..+|+.+...
T Consensus 20 ~~g~~~~v~~i-~~~~g~~~VlR~p~~-~~~~~~l~rE~~vL~~L~~~ 65 (276)
T cd05152 20 ESGLDFQVVFA-KDTDGVPWVLRIPRR-PDVSERAAAEKRVLALVRKH 65 (276)
T ss_pred CCcceeEEEEE-EcCCCCeEEEEecCC-HHHHHHHHHHHHHHHHHHhc
Confidence 44444455554 223466788886543 22345678999999999653
No 487
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=94.29 E-value=0.11 Score=48.60 Aligned_cols=70 Identities=11% Similarity=0.093 Sum_probs=52.0
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
..+.+....+.+.+++|++-|+.+... .. -..+++..++.+.+..+.-+-.....-|||+...||+++ ++
T Consensus 289 ~~~vv~~de~~y~yl~~kdhgt~is~i-k~-----~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~G 358 (488)
T COG5072 289 TLKVVSLDETLYLYLHFKDHGTPISII-KA-----DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EG 358 (488)
T ss_pred cceEEecCCceEEEEEEecCCceeeee-ec-----ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cC
Confidence 334433346778889999887765432 11 346788889999888888888777899999999999998 55
No 488
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.10 E-value=1.3 Score=41.50 Aligned_cols=44 Identities=14% Similarity=0.079 Sum_probs=29.7
Q ss_pred CceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 40 HFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 40 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
.-..||+... .++..+++|+..........+..|+.++..+...
T Consensus 37 ~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~ 80 (325)
T PRK11768 37 YENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEA 80 (325)
T ss_pred ccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC
Confidence 3446888743 3456789998765444456677899888888553
No 489
>KOG1826|consensus
Probab=93.04 E-value=0.035 Score=60.64 Aligned_cols=129 Identities=14% Similarity=0.106 Sum_probs=91.5
Q ss_pred CCeEEEEEEeec-cccHHHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHhhhcCC----eeeccCCCCceEEeechhHHh
Q psy12288 113 NGTHICMVFEVM-GYNLLRLIARSDYKG--IHIQNVRTIIKQVLEGLNYLHTQCR----IIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 113 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~--l~~~~~~~i~~ql~~~l~~lH~~~~----i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.....+..++++ +|++++.+.++.... +...-+.....+.+.+..-+|...+ .+|+++|+-|.++..+.
T Consensus 1302 ~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny---- 1377 (2724)
T KOG1826|consen 1302 ESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNY---- 1377 (2724)
T ss_pred CChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCC----
Confidence 455678889998 899999987764332 2222333333443555555554432 68899999999987666
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+++.++|+.+... ......++++.|+.|+....-.++
T Consensus 1378 ---------------------------------------~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t 1418 (2724)
T KOG1826|consen 1378 ---------------------------------------NVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFT 1418 (2724)
T ss_pred ---------------------------------------cccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhh
Confidence 38899999877221 123344678889999998888888
Q ss_pred chhhHHhHHHHHHHHHhCCCCC
Q psy12288 263 PAADIWSTACMAFELATGDYLF 284 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf 284 (393)
.++|+|..|+.+|...-|..+|
T Consensus 1419 ~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1419 KRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred hHHHHHHHHHHHHHHhcccHHH
Confidence 8899999999999988876666
No 490
>PTZ00296 choline kinase; Provisional
Probab=92.82 E-value=1.1 Score=43.76 Aligned_cols=53 Identities=11% Similarity=0.062 Sum_probs=36.7
Q ss_pred EEEEecccCceEEEEEEeCCC--------CceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQD--------KTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
-++.|..|=...+|++..... ++.|.+++.-......-....|..+++.+...
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~ 169 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKY 169 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHC
Confidence 456677777888999865421 46788998765544444567799998888654
No 491
>KOG1236|consensus
Probab=92.48 E-value=0.54 Score=44.81 Aligned_cols=62 Identities=19% Similarity=0.305 Sum_probs=39.8
Q ss_pred EEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 117 ICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 117 ~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
..++-+|. |-++..++.... .+++...+++.-...|+--+-.--+.+|.|+.|.||++..+.
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~ 382 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK 382 (565)
T ss_pred ceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence 34555566 667777776543 445555555555555554333222799999999999997654
No 492
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=89.66 E-value=2.2 Score=37.46 Aligned_cols=29 Identities=24% Similarity=0.253 Sum_probs=23.7
Q ss_pred HHHHHhh-hcCCeeeccCCCCceEEeechh
Q psy12288 154 EGLNYLH-TQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 154 ~~l~~lH-~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++|.-.| ++.+.+|+|..|+||+-|.++.
T Consensus 152 ~~L~~fH~~~~~~lHGD~np~NiM~D~~G~ 181 (308)
T PF07387_consen 152 KDLMDFHSENQHCLHGDCNPDNIMCDKFGY 181 (308)
T ss_pred HHHHHhhccCCCeecCCCChhheeecCCCC
Confidence 5567778 4447999999999999988884
No 493
>PHA03111 Ser/Thr kinase; Provisional
Probab=89.63 E-value=1.2 Score=41.39 Aligned_cols=64 Identities=17% Similarity=0.165 Sum_probs=38.4
Q ss_pred EEEEEeeccccHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc---CCeeeccCCCCceEEeec
Q psy12288 117 ICMVFEVMGYNLLRL---IARSDYKGIHIQNVRTIIKQVLEGLNYLHTQ---CRIIHTDIKPENILMCVD 180 (393)
Q Consensus 117 ~~iv~e~~~~~l~~~---~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~---~~i~H~dlkp~NIl~~~~ 180 (393)
-.||++...++.-.. .....+..-..+-++.++.|++.-.-.+.+. ...+|.||||+|||+-+.
T Consensus 250 nIIIfPLArcSadkv~~~~~~e~GF~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds 319 (444)
T PHA03111 250 NIIIFPLARCSADKVTEENAAELGFKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS 319 (444)
T ss_pred cEEEEehhhcccccCCHHHHHHcCCccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence 568888874432221 1111111123456778888887765444322 158999999999999544
No 494
>KOG2269|consensus
Probab=89.06 E-value=0.4 Score=44.23 Aligned_cols=61 Identities=20% Similarity=0.269 Sum_probs=46.5
Q ss_pred EEEEEeeccccHH--HHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 117 ICMVFEVMGYNLL--RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 117 ~~iv~e~~~~~l~--~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
.++||.++|.+-. -.+.. -.++.++.+..-.|+..++.-|...|-+||-|++-=|+|...+
T Consensus 358 hvLVMsFiGd~~~aAPkLK~---v~l~d~E~~~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~g 420 (531)
T KOG2269|consen 358 HVLVMSFIGDQGLAAPKLKN---VELTDDERRNAYDQVQSIMCRLYKECLLVHADLSEYNLLWTPG 420 (531)
T ss_pred ceEEEEeecCCCCCCccccc---cccChHHHHHHHHHHHHHHHHHHHhhheeecchhhhhheecCC
Confidence 5689999953322 22221 2378888888889999999999888899999999999998544
No 495
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=88.92 E-value=0.85 Score=42.20 Aligned_cols=16 Identities=31% Similarity=0.308 Sum_probs=14.9
Q ss_pred CeeeccCCCCceEEee
Q psy12288 164 RIIHTDIKPENILMCV 179 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~ 179 (393)
+++|+|+.+.||+++.
T Consensus 188 ~liHgD~~~~Nil~~~ 203 (313)
T TIGR02906 188 GFCHQDYAYHNILLKD 203 (313)
T ss_pred ceEcCCCCcccEEEeC
Confidence 7999999999999975
No 496
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=87.60 E-value=5.4 Score=36.63 Aligned_cols=74 Identities=15% Similarity=0.105 Sum_probs=45.6
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
-.+.++-|....+|+.. .+++.+.+|+-. ......+..|..-|+.+..... ..+++.+....
T Consensus 21 ~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~-----------~~vP~vi~~G~--- 82 (288)
T PF03881_consen 21 SIEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANP-----------IRVPKVIAWGE--- 82 (288)
T ss_dssp EEEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTT-----------SBS--EEEEEE---
T ss_pred eeEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCC-----------CCCCeEEEEEe---
Confidence 35678889999999985 567788899766 2345678999999999954322 23445554443
Q ss_pred CCCeEEEEEEeec
Q psy12288 112 RNGTHICMVFEVM 124 (393)
Q Consensus 112 ~~~~~~~iv~e~~ 124 (393)
..+..+++||++
T Consensus 83 -~~~~~fLlle~l 94 (288)
T PF03881_consen 83 -YDDDAFLLLEFL 94 (288)
T ss_dssp --SSCCEEEEE--
T ss_pred -ecCCceEEEEee
Confidence 223348999997
No 497
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=87.50 E-value=1.2 Score=41.51 Aligned_cols=65 Identities=18% Similarity=0.183 Sum_probs=37.4
Q ss_pred EEEEEeeccccHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc---CCeeeccCCCCceEEeech
Q psy12288 117 ICMVFEVMGYNLLRL---IARSDYKGIHIQNVRTIIKQVLEGLNYLHTQ---CRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 117 ~~iv~e~~~~~l~~~---~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~---~~i~H~dlkp~NIl~~~~~ 181 (393)
-.||++...++.-.. .....+-....+-++.++.|++.-.--+.+. ...+|.||||+|||+-+..
T Consensus 246 nIIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~ 316 (434)
T PF05445_consen 246 NIIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSK 316 (434)
T ss_pred cEEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCC
Confidence 468999875443221 1111111223445677788876544223221 1589999999999995443
No 498
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=86.84 E-value=0.31 Score=38.27 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=36.4
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHh
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAV 81 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l 81 (393)
.-||.|+.|.||+|.... |+.||||+.... ..+.+..++.+++.+
T Consensus 17 ~PlasASiaQVh~a~l~~-g~~VaVKV~rP~--i~~~i~~Dl~~l~~~ 61 (119)
T PF03109_consen 17 EPLASASIAQVHRARLKD-GEEVAVKVQRPG--IEEQIEADLRILRRL 61 (119)
T ss_pred chhhheehhhheeeeecc-cchhhhhhcchH--HHHHHHHHHHHHHHH
Confidence 578999999999997664 899999987753 456777788887776
No 499
>PRK10271 thiK thiamine kinase; Provisional
Probab=86.78 E-value=0.59 Score=39.80 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=15.4
Q ss_pred CeeeccCCCCceEEeech
Q psy12288 164 RIIHTDIKPENILMCVDY 181 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~ 181 (393)
..+|+|+.|.|+++..++
T Consensus 78 ~p~H~D~~~~N~~~~~~~ 95 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG 95 (188)
T ss_pred eeecCCCCCccEEEECCC
Confidence 479999999999997665
No 500
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=84.48 E-value=1.7 Score=39.56 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhhhc-CCeeeccCCCCceEEeech
Q psy12288 144 NVRTIIKQVLEGLNYLHTQ-CRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 144 ~~~~i~~ql~~~l~~lH~~-~~i~H~dlkp~NIl~~~~~ 181 (393)
.+...+..+-.++.-.+.. .-+||+|+.|.|++.+..+
T Consensus 133 ~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~ 171 (269)
T COG0510 133 LLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKG 171 (269)
T ss_pred HHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCC
Confidence 3444566666666666643 3589999999999998744
Done!