BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12290
(530 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P51512|MMP16_HUMAN Matrix metalloproteinase-16 OS=Homo sapiens GN=MMP16 PE=1 SV=2
Length = 607
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 136/257 (52%), Gaps = 19/257 (7%)
Query: 195 PPARYPDIARAEPRTTPTTTTPPATRRGESNPGP-----------SDKPDTCDTSYDAIA 243
PP + P R P P + PPA R P P KP+ CD +++ +A
Sbjct: 292 PPDKIPPPTRPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLA 351
Query: 244 VIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIG 303
++R E+FVFKD+W WR+ + V+ GYP+ I FW LP + IDAVY+ D + FF G
Sbjct: 352 ILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPS---IDAVYENSDGNFVFFKG 408
Query: 304 RQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGR 363
+Y++F+ L PGYP L LG ID+A+ W KTY F G RYW+ +E
Sbjct: 409 NKYWVFKDTTLQPGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKT 468
Query: 364 SEPDYPRNMTENWRGVGVDIDDAFQWK-DGATYFFKGKGFWKFKDVSMRVEKEKPSPSAQ 422
+P YP+ +T W+G+ AF K +G TYF+KGK +WKF + ++VE P +
Sbjct: 469 MDPGYPKPITV-WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILK 527
Query: 423 FWMKCPEISSPEDRISE 439
+M C P DR+ E
Sbjct: 528 DFMGC---DGPTDRVKE 541
>sp|Q9ULZ9|MMP17_HUMAN Matrix metalloproteinase-17 OS=Homo sapiens GN=MMP17 PE=1 SV=4
Length = 603
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 5/206 (2%)
Query: 224 SNPGPSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIG-DKGVLPGYPVLIHQFWSELPH 282
S P D P C T +DA+A IR E F FK ++ WR+ D+ ++ P +H+FW LP
Sbjct: 321 SAPPRKDVPHRCSTHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPL 380
Query: 283 NLTHIDAVYQRIDNH-IAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWG 341
+L +DAVY+R +H I FF G +Y++F+ + GYPRP++ LP IDAA W
Sbjct: 381 HLDSVDAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDFSLPPG--GIDAAFSWA 438
Query: 342 YNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKG 401
+N +TY F YW+ DD T +P YP + WRGV +DDA +W DGA+YFF+G+
Sbjct: 439 HNDRTYFFKDQLYWRYDDHTRHMDPGYPAQ-SPLWRGVPSTLDDAMRWSDGASYFFRGQE 497
Query: 402 FWKFKDVSMRVEKEKPSPSAQFWMKC 427
+WK D + V P +A+ W+ C
Sbjct: 498 YWKVLDGELEVAPGYPQSTARDWLVC 523
>sp|Q5RES1|MMP14_PONAB Matrix metalloproteinase-14 OS=Pongo abelii GN=MMP14 PE=2 SV=1
Length = 582
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 11/231 (4%)
Query: 206 EPRTTPTTTTPPATRRGESNPGPSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGV 265
+PRTT + P + P+ P+TCD ++D +A++R E+FVFK+RW WR+ + V
Sbjct: 296 QPRTTSRPSVPDKPKN------PTYGPNTCDGNFDTVAMLRGEMFVFKERWFWRVRNNQV 349
Query: 266 LPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTAL 325
+ GYP+ I QFW LP I+ Y+R D FF G ++++F+ L PGYP+ + L
Sbjct: 350 MDGYPMPIGQFWRGLP---ASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKEL 406
Query: 326 GLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDD 385
G ++IDAA+ W N KTY F G +Y++ ++E + +YP+N+ + W G+
Sbjct: 407 GRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNI-KVWEGIPESPRG 465
Query: 386 AFQWKDGA-TYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKCPEISSPED 435
+F D TYF+KG +WKF + ++VE P + + WM CP P++
Sbjct: 466 SFMGSDEVFTYFYKGNKYWKFDNQKLKVEPGYPKSALRDWMGCPSGGRPDE 516
>sp|Q10739|MMP14_RAT Matrix metalloproteinase-14 OS=Rattus norvegicus GN=Mmp14 PE=2 SV=2
Length = 582
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 131/231 (56%), Gaps = 11/231 (4%)
Query: 206 EPRTTPTTTTPPATRRGESNPGPSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGV 265
+PRTT + P R P+ P+ CD ++D +A++R E+FVFK+RW WR+ + V
Sbjct: 296 QPRTTSRPSVPDKPRN------PTYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQV 349
Query: 266 LPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTAL 325
+ GYP+ I QFW LP I+ Y+R D FF G ++++F+ L PGYP+ + L
Sbjct: 350 MDGYPMPIGQFWRGLP---ASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKEL 406
Query: 326 GLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDD 385
G ++IDAA+ W N KTY F G +Y++ ++E + +YP+N+ + W G+
Sbjct: 407 GRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEEFRAVDSEYPKNI-KVWEGIPESPRG 465
Query: 386 AFQWKDGA-TYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKCPEISSPED 435
+F D TYF+KG +WKF + ++VE P + + WM CP P++
Sbjct: 466 SFMGSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPSGGRPDE 516
>sp|Q99PW6|MMP24_RAT Matrix metalloproteinase-24 OS=Rattus norvegicus GN=Mmp24 PE=2 SV=1
Length = 618
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 228 PSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHI 287
P KP+ CD +++ +A+ R E+FVFKDRW WR+ + V GYP+ I QFW LP I
Sbjct: 346 PGAKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLP---ARI 402
Query: 288 DAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTY 347
DA Y+R D FF G +Y++F+ + + PGYP L LG E ID A+ W KTY
Sbjct: 403 DAAYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTY 462
Query: 348 LFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDG-ATYFFKGKGFWKFK 406
F G RYW+ +E ++P YP+ +T W+G+ AF K+G TYF+KG+ +WKF
Sbjct: 463 FFKGERYWRYSEERRATDPGYPKPITV-WKGIPQAPQGAFISKEGYYTYFYKGRDYWKFD 521
Query: 407 DVSMRVEKEKPSPSAQFWMKCPEISSPEDRISERRV 442
+ + VE P + WM C + +R ERR+
Sbjct: 522 NQKLSVEPGYPRNILRDWMGCKQ--KEVERRKERRL 555
>sp|O54732|MMP15_MOUSE Matrix metalloproteinase-15 OS=Mus musculus GN=Mmp15 PE=2 SV=1
Length = 657
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 116/206 (56%), Gaps = 5/206 (2%)
Query: 232 PDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHIDAVY 291
P+ CD ++D +AV+R E+FVFK RW WR+ VL YP+ I FW LP N I A Y
Sbjct: 363 PNICDGNFDTVAVLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGN---ISAAY 419
Query: 292 QRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYLFSG 351
+R D H FF G +Y+LF L PGYP+PL++ G +RID A+ W T+ F
Sbjct: 420 ERQDGHFVFFKGNRYWLFREANLEPGYPQPLSSYGTDIPYDRIDTAIWWEPTGHTFFFQA 479
Query: 352 TRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGA-TYFFKGKGFWKFKDVSM 410
RYW+ ++ET +P YP+ ++ W+G+ AF D A TYF+KG +WKF + +
Sbjct: 480 DRYWRFNEETQHGDPGYPKPISV-WQGIPTSPKGAFLSNDAAYTYFYKGTKYWKFNNERL 538
Query: 411 RVEKEKPSPSAQFWMKCPEISSPEDR 436
R+E P + +M C E P R
Sbjct: 539 RMEPGHPKSILRDFMGCQEHVEPRSR 564
>sp|Q9R0S2|MMP24_MOUSE Matrix metalloproteinase-24 OS=Mus musculus GN=Mmp24 PE=1 SV=2
Length = 618
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 228 PSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHI 287
P KP+ CD +++ +A+ R E+FVFKDRW WR+ + V GYP+ I QFW LP I
Sbjct: 346 PGAKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLP---ARI 402
Query: 288 DAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTY 347
DA Y+R D FF G +Y++F+ + + PGYP L LG E ID A+ W KTY
Sbjct: 403 DAAYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTY 462
Query: 348 LFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDG-ATYFFKGKGFWKFK 406
F G RYW+ +E ++P YP+ +T W+G+ AF K+G TYF+KG+ +WKF
Sbjct: 463 FFKGERYWRYSEERRATDPGYPKPITV-WKGIPQAPQGAFISKEGYYTYFYKGRDYWKFD 521
Query: 407 DVSMRVEKEKPSPSAQFWMKCPEISSPEDRISERRV 442
+ + VE P + WM C + +R ERR+
Sbjct: 522 NQKLSVEPGYPRNILRDWMGCKQ--KEVERRKERRL 555
>sp|Q9R0S3|MMP17_MOUSE Matrix metalloproteinase-17 OS=Mus musculus GN=Mmp17 PE=1 SV=3
Length = 578
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 122/215 (56%), Gaps = 6/215 (2%)
Query: 224 SNPGPSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIG-DKGVLPGYPVLIHQFWSELPH 282
S P D P C +DA+A IR E F FK ++ WR+ D+ ++ P +H+FW LP
Sbjct: 325 STPPQKDVPHRCTAHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPL 384
Query: 283 NLTHIDAVYQRIDNH-IAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWG 341
+L +DAVY+R +H I FF G +Y++F+ + GYPRP++ LP IDA W
Sbjct: 385 HLDSVDAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDFSLPPG--GIDAVFSWA 442
Query: 342 YNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKG 401
+N +TY F YW+ DD T R +P YP WRGV +DDA +W DGA+YFF+G+
Sbjct: 443 HNDRTYFFKDQLYWRYDDHTRRMDPGYPAQ-GPLWRGVPSMLDDAMRWSDGASYFFRGQE 501
Query: 402 FWKFKDVSMRVEKEKPSPSAQFWMKCPE-ISSPED 435
+WK D + P +A+ W+ C E ++ ED
Sbjct: 502 YWKVLDGELEAAPGYPQSTARDWLVCGEPLADAED 536
>sp|O35548|MMP16_RAT Matrix metalloproteinase-16 OS=Rattus norvegicus GN=Mmp16 PE=2 SV=1
Length = 607
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 135/257 (52%), Gaps = 19/257 (7%)
Query: 195 PPARYPDIARAEPRTTPTTTTPPATRRGESNPGP-----------SDKPDTCDTSYDAIA 243
PP + P R P P + PPA R P P KP+ CD +++ +A
Sbjct: 292 PPDKIPPPTRPLPTVPPHRSVPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLA 351
Query: 244 VIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIG 303
++R E+FVFKD+W WR+ + V+ GYP+ I FW LP + IDAVY+ D + FF G
Sbjct: 352 ILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPS---IDAVYENSDGNFVFFKG 408
Query: 304 RQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGR 363
+Y++F+ L PGYP L LG ID+A+ W KTY F G RYW+ +E
Sbjct: 409 NKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKT 468
Query: 364 SEPDYPRNMTENWRGVGVDIDDAFQWK-DGATYFFKGKGFWKFKDVSMRVEKEKPSPSAQ 422
+P YP+ +T W+G+ AF K +G TYF+KGK +WKF + ++VE P +
Sbjct: 469 MDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILK 527
Query: 423 FWMKCPEISSPEDRISE 439
+M C P DR E
Sbjct: 528 DFMGC---DGPTDRDKE 541
>sp|P50281|MMP14_HUMAN Matrix metalloproteinase-14 OS=Homo sapiens GN=MMP14 PE=1 SV=3
Length = 582
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 11/231 (4%)
Query: 206 EPRTTPTTTTPPATRRGESNPGPSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGV 265
+PRTT + P + P+ P+ CD ++D +A++R E+FVFK+RW WR+ + V
Sbjct: 296 QPRTTSRPSVPDKPKN------PTYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQV 349
Query: 266 LPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTAL 325
+ GYP+ I QFW LP I+ Y+R D FF G ++++F+ L PGYP+ + L
Sbjct: 350 MDGYPMPIGQFWRGLP---ASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKEL 406
Query: 326 GLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDD 385
G ++IDAA+ W N KTY F G +Y++ ++E + +YP+N+ + W G+
Sbjct: 407 GRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNI-KVWEGIPESPRG 465
Query: 386 AFQWKDGA-TYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKCPEISSPED 435
+F D TYF+KG +WKF + ++VE P + + WM CP P++
Sbjct: 466 SFMGSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPSGGRPDE 516
>sp|Q9Y5R2|MMP24_HUMAN Matrix metalloproteinase-24 OS=Homo sapiens GN=MMP24 PE=2 SV=1
Length = 645
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 228 PSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHI 287
P KP+ CD +++ +A+ R E+FVFKDRW WR+ + V GYP+ I QFW LP I
Sbjct: 373 PGTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLP---ARI 429
Query: 288 DAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTY 347
DA Y+R D FF G +Y++F+ + + PGYP L LG E ID A+ W KTY
Sbjct: 430 DAAYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTY 489
Query: 348 LFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDG-ATYFFKGKGFWKFK 406
F G RYW+ +E ++P YP+ +T W+G+ AF K+G TYF+KG+ +WKF
Sbjct: 490 FFKGERYWRYSEERRATDPGYPKPITV-WKGIPQAPQGAFISKEGYYTYFYKGRDYWKFD 548
Query: 407 DVSMRVEKEKPSPSAQFWMKCPEISSPEDRISERRV 442
+ + VE P + WM C + +R ERR+
Sbjct: 549 NQKLSVEPGYPRNILRDWMGCNQ--KEVERRKERRL 582
>sp|Q9WTR0|MMP16_MOUSE Matrix metalloproteinase-16 OS=Mus musculus GN=Mmp16 PE=2 SV=3
Length = 607
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 135/257 (52%), Gaps = 19/257 (7%)
Query: 195 PPARYPDIARAEPRTTPTTTTPPATRRGESNPGP-----------SDKPDTCDTSYDAIA 243
PP + P R P P + PPA R P P KP+ CD +++ +A
Sbjct: 292 PPDKIPPPTRPLPTVPPHRSVPPADPRRHDRPKPPRPPTGRPSYPGAKPNICDGNFNTLA 351
Query: 244 VIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIG 303
++R E+FVFKD+W WR+ + V+ GYP+ I FW LP + IDAVY+ D + FF G
Sbjct: 352 ILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPS---IDAVYENSDGNFVFFKG 408
Query: 304 RQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGR 363
+Y++F+ L PGYP L LG ID+A+ W KTY F G RYW+ +E
Sbjct: 409 NKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKT 468
Query: 364 SEPDYPRNMTENWRGVGVDIDDAFQWK-DGATYFFKGKGFWKFKDVSMRVEKEKPSPSAQ 422
+P YP+ +T W+G+ AF K +G TYF+KGK +WKF + ++VE P +
Sbjct: 469 MDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILK 527
Query: 423 FWMKCPEISSPEDRISE 439
+M C P DR E
Sbjct: 528 DFMGC---DGPTDRDKE 541
>sp|Q9GLE4|MMP14_BOVIN Matrix metalloproteinase-14 OS=Bos taurus GN=MMP14 PE=2 SV=1
Length = 582
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 127/224 (56%), Gaps = 11/224 (4%)
Query: 206 EPRTTPTTTTPPATRRGESNPGPSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGV 265
+PRTT + P + P+ P+ CD ++D +A++R E+FVFK+RW WR+ V
Sbjct: 295 QPRTTSRPSVPDKPKN------PTYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRKNQV 348
Query: 266 LPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTAL 325
+ GYP+ I QFW LP I+ Y+R D FF G ++++F+ L PGYP+ + L
Sbjct: 349 MDGYPMPIGQFWRGLP---ASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKEL 405
Query: 326 GLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDD 385
G +RIDAA+ W N KTY F G +Y++ ++E E +YP+N+ + W G+
Sbjct: 406 GRGLPTDRIDAALFWMPNGKTYFFRGNKYYRFNEELRIVESEYPKNI-KVWEGIPESPRG 464
Query: 386 AFQWKDGA-TYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKCP 428
+F D TYF+KG +WKF + ++VE P + + WM CP
Sbjct: 465 SFMGSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCP 508
>sp|P53690|MMP14_MOUSE Matrix metalloproteinase-14 OS=Mus musculus GN=Mmp14 PE=2 SV=3
Length = 582
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 11/231 (4%)
Query: 206 EPRTTPTTTTPPATRRGESNPGPSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGV 265
+PRTT + P + P+ P+ CD ++D +A++R E+FVFK+RW WR+ + V
Sbjct: 296 QPRTTSRPSVPDKPKN------PAYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQV 349
Query: 266 LPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTAL 325
+ GYP+ I QFW LP I+ Y+R D FF G ++++F+ L PGYP+ + L
Sbjct: 350 MDGYPMPIGQFWRGLP---ASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKEL 406
Query: 326 GLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDD 385
G ++IDAA+ W N KTY F G +Y++ ++E + +YP+N+ + W G+
Sbjct: 407 GRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEEFRAVDSEYPKNI-KVWEGIPESPRG 465
Query: 386 AFQWKDGA-TYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKCPEISSPED 435
+F D TYF+KG +WKF + ++VE P + + WM CP P++
Sbjct: 466 SFMGSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPSGGRPDE 516
>sp|Q9XT90|MMP14_PIG Matrix metalloproteinase-14 OS=Sus scrofa GN=MMP14 PE=2 SV=1
Length = 580
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 129/231 (55%), Gaps = 11/231 (4%)
Query: 206 EPRTTPTTTTPPATRRGESNPGPSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGV 265
+PRTT + P + P+ P+ CD ++D +A++R E+FVFK+RW WR+ V
Sbjct: 294 QPRTTSKPSVPDKPKN------PTYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRKNQV 347
Query: 266 LPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTAL 325
+ GYP+ I QFW LP I+ Y+R D FF G ++++F+ L PGYP+ + L
Sbjct: 348 MDGYPMPIGQFWRGLP---ASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKEL 404
Query: 326 GLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDD 385
G ++IDAA+ W N K Y F G +Y++ ++E + +YP+N+ + W G+
Sbjct: 405 GRRLPTDKIDAALFWMPNGKDYFFRGNKYYRFNEELRAVDSEYPKNI-KVWEGIPESPRG 463
Query: 386 AFQWKDGA-TYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKCPEISSPED 435
+F D TYF+KG +WKF + ++VE P + + WM CP P++
Sbjct: 464 SFMGSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPSGGRPDE 514
>sp|P51511|MMP15_HUMAN Matrix metalloproteinase-15 OS=Homo sapiens GN=MMP15 PE=1 SV=1
Length = 669
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 116/206 (56%), Gaps = 5/206 (2%)
Query: 232 PDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHIDAVY 291
P+ CD +D +A++R E+FVFK RW WR+ VL YP+ I FW LP + I A Y
Sbjct: 367 PNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGD---ISAAY 423
Query: 292 QRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYLFSG 351
+R D FF G +Y+LF L PGYP+PLT+ GL +RID A+ W T+ F
Sbjct: 424 ERQDGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQE 483
Query: 352 TRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGA-TYFFKGKGFWKFKDVSM 410
RYW+ ++ET R +P YP+ ++ W+G+ AF D A TYF+KG +WKF + +
Sbjct: 484 DRYWRFNEETQRGDPGYPKPISV-WQGIPASPKGAFLSNDAAYTYFYKGTKYWKFDNERL 542
Query: 411 RVEKEKPSPSAQFWMKCPEISSPEDR 436
R+E P + +M C E P R
Sbjct: 543 RMEPGYPKSILRDFMGCQEHVEPGPR 568
>sp|Q95220|MMP14_RABIT Matrix metalloproteinase-14 OS=Oryctolagus cuniculus GN=MMP14 PE=2
SV=2
Length = 582
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 225 NPG-PSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHN 283
+PG P+ P CD ++D +AV R E+FVFK+RW WR+ + V+ GYP+ I Q W LP
Sbjct: 308 SPGNPTYGPKICDGNFDTVAVFRGEMFVFKERWFWRVRNNQVMDGYPMPIGQLWRGLP-- 365
Query: 284 LTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYN 343
I+ Y+R D FF G ++++F+ L PGYP+ + LG ++IDAA+ W N
Sbjct: 366 -ASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPN 424
Query: 344 SKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGA-TYFFKGKGF 402
KTY F G +Y++ ++E + +YP+N+ + W G+ +F D TYF+KG +
Sbjct: 425 GKTYFFRGNKYYRFNEELRAVDSEYPKNI-KVWEGIPESPRGSFMGSDEVFTYFYKGNKY 483
Query: 403 WKFKDVSMRVEKEKPSPSAQFWMKCPEISSPED 435
WKF + ++VE P + + WM CP P++
Sbjct: 484 WKFNNQKLKVEPGYPKSALRDWMGCPAGGRPDE 516
>sp|Q3U435|MMP25_MOUSE Matrix metalloproteinase-25 OS=Mus musculus GN=Mmp25 PE=2 SV=1
Length = 615
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 118/218 (54%), Gaps = 11/218 (5%)
Query: 232 PDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPG-YPVLIHQFWSELPHNLTHIDAV 290
PD C+ ++DA+A IR E+F+FK W WR+ G L P +H+FW LP ++ I A
Sbjct: 368 PDRCEGNFDAVANIRGEIFLFKGPWFWRLQPSGQLVSPRPAGLHRFWEGLPTHVKVIQAA 427
Query: 291 YQR-IDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYLF 349
Y R +D I F G Q+++F+ R L G RPL GLP E +DA W +N KTYL
Sbjct: 428 YARPLDGRIILFSGPQFWVFQE-RQLEGAARPLVEFGLPPG-EDVDAVFSWPHNGKTYLI 485
Query: 350 SGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFWKFKDVS 409
G +YW+ D+ R +P YPR ++ W G DD G TYFFKG FW+F + S
Sbjct: 486 RGQKYWRYDEVAARPDPGYPRALSL-WDGAPFAPDDVTISNTGDTYFFKGTHFWRFAEGS 544
Query: 410 MRVEKEKPSPSAQFWMKCPE------ISSPEDRISERR 441
++ E + P P W+ CP ++SP S+ R
Sbjct: 545 VKAESDSPQPIGPKWLDCPAPNSDPRVTSPPKTTSKTR 582
>sp|Q9NPA2|MMP25_HUMAN Matrix metalloproteinase-25 OS=Homo sapiens GN=MMP25 PE=1 SV=1
Length = 562
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 110/203 (54%), Gaps = 5/203 (2%)
Query: 232 PDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPG-YPVLIHQFWSELPHNLTHIDAV 290
PD C+ ++DAIA IR E F FK W WR+ G L P +H+FW LP + + A
Sbjct: 314 PDRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQAA 373
Query: 291 YQRI-DNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYLF 349
Y R D I F G Q+++F+ R L G RPLT LGLP E +DA W N KTYL
Sbjct: 374 YARHRDGRILLFSGPQFWVFQD-RQLEGGARPLTELGLPPG-EEVDAVFSWPQNGKTYLV 431
Query: 350 SGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFWKFKDVS 409
G +YW+ D+ R +P YPR+++ W G DD G TYFFKG +W+F S
Sbjct: 432 RGRQYWRYDEAAARPDPGYPRDLSL-WEGAPPSPDDVTVSNAGDTYFFKGAHYWRFPKNS 490
Query: 410 MRVEKEKPSPSAQFWMKCPEISS 432
++ E + P P W+ CP SS
Sbjct: 491 IKTEPDAPQPMGPNWLDCPAPSS 513
>sp|Q90611|MMP2_CHICK 72 kDa type IV collagenase OS=Gallus gallus GN=MMP2 PE=1 SV=1
Length = 663
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 117/200 (58%), Gaps = 9/200 (4%)
Query: 232 PDTC--DTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHIDA 289
P+ C D +D +A IR E+F FKDR+MWR + P P+L+ FW +LP IDA
Sbjct: 469 PELCKHDIVFDGVAQIRGEIFFFKDRFMWRTVNPRGKPTGPLLVATFWPDLPEK---IDA 525
Query: 290 VYQR-IDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYL 348
VY+ D FF G +Y+++ L GYP+ LT+LGLP ++RIDAA WG N KTY+
Sbjct: 526 VYESPQDEKAVFFAGNEYWVYTASNLDRGYPKKLTSLGLPPDVQRIDAAFNWGRNKKTYI 585
Query: 349 FSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKD-GATYFFKGKGFWKFKD 407
FSG RYWK ++E + E P+ + ++W GV ++D D G TYFFK + + + +D
Sbjct: 586 FSGDRYWKYNEEKKKMELATPKFIADSWNGVPDNLDAVLGLTDSGYTYFFKDQYYLQMED 645
Query: 408 VSMRVEKEKPSPSAQFWMKC 427
S+++ K S W+ C
Sbjct: 646 KSLKIVKIGKISSD--WLGC 663
>sp|Q11005|MMP11_XENLA Stromelysin-3 OS=Xenopus laevis GN=mmp11 PE=1 SV=1
Length = 477
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 9/212 (4%)
Query: 223 ESNPGPSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPH 282
ESN P+ +PD C T++DA++ IR E+F FK ++WR+ + GYP L + W +P
Sbjct: 267 ESNEIPAAEPDACKTNFDAVSTIRGELFFFKSGYVWRLRGGKLQNGYPALASRHWRGIPD 326
Query: 283 NLTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGY 342
+DA ++ +I FF G Q+++F+G +L P P+T +G+ S+ +I AA VWG
Sbjct: 327 T---VDAAFEDSVGNIWFFYGSQFWVFDG-KLQASGPFPITDIGI--SVTQIQAAFVWGT 380
Query: 343 --NSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGK 400
N KTYLF G YW+ + ET R E + R + + WRGV ID AFQ + G YF KG+
Sbjct: 381 EKNKKTYLFRGGEYWRFNPETRRVESRHSRRIGD-WRGVPKGIDAAFQDEQGYAYFVKGR 439
Query: 401 GFWKFKDVSMRVEKEKPSPSAQFWMKCPEISS 432
+WKF +RV P +Q + C S+
Sbjct: 440 QYWKFDPFKVRVMDGYPHLISQDFFNCQASST 471
>sp|Q499S5|MMP11_RAT Stromelysin-3 OS=Rattus norvegicus GN=Mmp11 PE=1 SV=1
Length = 491
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 126/230 (54%), Gaps = 14/230 (6%)
Query: 207 PRTTPTTTTPPATRRGESNPG------PSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRI 260
P+ TPT+ TP + + ++ P P+ C+TS+DA++ IR E+F FK ++WR+
Sbjct: 263 PQLTPTSPTPTLSSQAGTDTNEIALQEPEVPPEVCETSFDAVSTIRGELFFFKAGFVWRL 322
Query: 261 GDKGVLPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPR 320
+ PGYP L + W LP + +DA ++ I FF G QY++++G + + G P
Sbjct: 323 RSGQLQPGYPALASRHWQGLP---SPVDAAFEDAQGQIWFFQGAQYWVYDGEKPVLG-PA 378
Query: 321 PLTALGLPASLERIDAAMVWG-YNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGV 379
PL+ LGL S + AA+VWG +K Y F G YW+ T R + PR T +WRGV
Sbjct: 379 PLSKLGLQGS--PVHAALVWGPEKNKIYFFRGGDYWRFHPRTQRVDNPVPRRTT-DWRGV 435
Query: 380 GVDIDDAFQWKDGATYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKCPE 429
+ID AFQ +G YF +G +WKF V ++V + P P + C E
Sbjct: 436 PSEIDAAFQDAEGYAYFLRGHLYWKFDPVKVKVLESFPRPIGPDFFDCAE 485
>sp|Q02853|MMP11_MOUSE Stromelysin-3 OS=Mus musculus GN=Mmp11 PE=1 SV=2
Length = 492
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 124/230 (53%), Gaps = 14/230 (6%)
Query: 207 PRTTPTTTTPPATRRGESNPG------PSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRI 260
P+ PT+ P + + ++ P PD C+TS+DA++ IR E+F FK ++WR+
Sbjct: 264 PQMAPTSPAPTLSSQAGTDTNEIALLEPETPPDVCETSFDAVSTIRGELFFFKAGFVWRL 323
Query: 261 GDKGVLPGYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPR 320
+ PGYP L + W LP + +DA ++ I FF G QY++++G + + G P
Sbjct: 324 RSGRLQPGYPALASRHWQGLP---SPVDAAFEDAQGQIWFFQGAQYWVYDGEKPVLG-PA 379
Query: 321 PLTALGLPASLERIDAAMVWG-YNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGV 379
PL+ LGL S + AA+VWG +K Y F G YW+ T R + PR T +WRGV
Sbjct: 380 PLSKLGLQGS--PVHAALVWGPEKNKIYFFRGGDYWRFHPRTQRVDNPVPRRST-DWRGV 436
Query: 380 GVDIDDAFQWKDGATYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKCPE 429
+ID AFQ +G YF +G +WKF V ++V + P P + C E
Sbjct: 437 PSEIDAAFQDAEGYAYFLRGHLYWKFDPVKVKVLEGFPRPVGPDFFDCAE 486
>sp|P50757|MMP2_RABIT 72 kDa type IV collagenase OS=Oryctolagus cuniculus GN=MMP2 PE=2
SV=1
Length = 662
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 122/229 (53%), Gaps = 21/229 (9%)
Query: 203 ARAEPRTTPTTTTPPATRRGESNPGPSDKPDTC--DTSYDAIAVIRTEVFVFKDRWMWRI 260
A + T PT T P T P+ C D +D IA IR E+F FKDR++WR
Sbjct: 451 AGTDAGTGPTPTLGPVT------------PEICTQDIVFDGIAQIRGEIFFFKDRFIWRT 498
Query: 261 GDKGVLPGYPVLIHQFWSELPHNLTHIDAVYQR-IDNHIAFFIGRQYFLFEGIRLLPGYP 319
G P P+L+ FW ELP IDAVY+ + FF G +Y+++ L GYP
Sbjct: 499 VTPGDKPMGPLLVATFWPELPEK---IDAVYEAPQEEKAVFFAGNEYWVYSASTLERGYP 555
Query: 320 RPLTALGLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGV 379
+PLT+LGLP ++R+DAA W N KTY+F+G ++W+ ++ + +P +PR + + W +
Sbjct: 556 KPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPRLIADAWNAI 615
Query: 380 GVDIDDAFQWK-DGATYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKC 427
+D + G +YFFKG + K ++ S++ K + W+ C
Sbjct: 616 PDHLDAVVDLQGSGHSYFFKGTYYLKLENQSLKSVKVGSIKTD--WLGC 662
>sp|P08253|MMP2_HUMAN 72 kDa type IV collagenase OS=Homo sapiens GN=MMP2 PE=1 SV=2
Length = 660
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 124/232 (53%), Gaps = 24/232 (10%)
Query: 200 PDIARAEPRTTPTTTTPPATRRGESNPGPSDKPDTC--DTSYDAIAVIRTEVFVFKDRWM 257
PDI + T PT T P T P+ C D +D IA IR E+F FKDR++
Sbjct: 449 PDI---DLGTGPTPTLGPVT------------PEICKQDIVFDGIAQIRGEIFFFKDRFI 493
Query: 258 WRIGDKGVLPGYPVLIHQFWSELPHNLTHIDAVYQR-IDNHIAFFIGRQYFLFEGIRLLP 316
WR P P+L+ FW ELP IDAVY+ + FF G +Y+++ L
Sbjct: 494 WRTVTPRDKPMGPLLVATFWPELPEK---IDAVYEAPQEEKAVFFAGNEYWIYSASTLER 550
Query: 317 GYPRPLTALGLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENW 376
GYP+PLT+LGLP ++R+DAA W N KTY+F+G ++W+ ++ + +P +P+ + + W
Sbjct: 551 GYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAW 610
Query: 377 RGVGVDIDDAFQWKDGA-TYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKC 427
+ ++D + G +YFFKG + K ++ S++ K S W+ C
Sbjct: 611 NAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSD--WLGC 660
>sp|P24347|MMP11_HUMAN Stromelysin-3 OS=Homo sapiens GN=MMP11 PE=1 SV=3
Length = 488
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 112/203 (55%), Gaps = 8/203 (3%)
Query: 228 PSDKPDTCDTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHI 287
P PD C+ S+DA++ IR E+F FK ++WR+ + PGYP L + W LP + +
Sbjct: 287 PDAPPDACEASFDAVSTIRGELFFFKAGFVWRLRGGQLQPGYPALASRHWQGLP---SPV 343
Query: 288 DAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWG-YNSKT 346
DA ++ HI FF G QY++++G + + G P PLT LGL + AA+VWG +K
Sbjct: 344 DAAFEDAQGHIWFFQGAQYWVYDGEKPVLG-PAPLTELGL--VRFPVHAALVWGPEKNKI 400
Query: 347 YLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFWKFK 406
Y F G YW+ T R + PR T +WRGV +ID AFQ DG YF +G+ +WKF
Sbjct: 401 YFFRGRDYWRFHPSTRRVDSPVPRRAT-DWRGVPSEIDAAFQDADGYAYFLRGRLYWKFD 459
Query: 407 DVSMRVEKEKPSPSAQFWMKCPE 429
V ++ + P + C E
Sbjct: 460 PVKVKALEGFPRLVGPDFFGCAE 482
>sp|P33436|MMP2_RAT 72 kDa type IV collagenase OS=Rattus norvegicus GN=Mmp2 PE=2 SV=2
Length = 662
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 232 PDTC--DTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHIDA 289
P+ C D +D IA IR E+F FKDR++WR P P+L+ FW ELP IDA
Sbjct: 468 PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEK---IDA 524
Query: 290 VYQR-IDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYL 348
VY+ + FF G +Y+++ L GYP+PLT+LGLP ++++DAA W N KTY+
Sbjct: 525 VYEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQQVDAAFNWSKNKKTYI 584
Query: 349 FSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGA-TYFFKGKGFWKFKD 407
FSG ++W+ ++ + +P +P+ + ++W + ++D + G +YFFKG + K ++
Sbjct: 585 FSGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLEN 644
Query: 408 VSMRVEKEKPSPSAQFWMKC 427
S++ K S W+ C
Sbjct: 645 QSLKSVKFGSIKSD--WLGC 662
>sp|Q9GLE5|MMP2_BOVIN 72 kDa type IV collagenase OS=Bos taurus GN=MMP2 PE=2 SV=1
Length = 661
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 124/232 (53%), Gaps = 24/232 (10%)
Query: 200 PDIARAEPRTTPTTTTPPATRRGESNPGPSDKPDTC--DTSYDAIAVIRTEVFVFKDRWM 257
PDI + T PT T P T P+ C D +D I+ IR E+F FKDR++
Sbjct: 450 PDI---DTGTGPTPTLGPVT------------PELCKQDIVFDGISQIRGEIFFFKDRFI 494
Query: 258 WRIGDKGVLPGYPVLIHQFWSELPHNLTHIDAVYQR-IDNHIAFFIGRQYFLFEGIRLLP 316
WR P P+L+ FW ELP IDAVY+ + FF G +Y+++ L
Sbjct: 495 WRTVTPRDKPTGPLLVATFWPELPEK---IDAVYEDPQEEKAVFFAGNEYWVYSASTLER 551
Query: 317 GYPRPLTALGLPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENW 376
GYP+PLT+LGLP ++++DAA W N KTY+F+G ++W+ ++ + +P +P+ + + W
Sbjct: 552 GYPKPLTSLGLPPGVQKVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAW 611
Query: 377 RGVGVDIDDAFQWKDGA-TYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKC 427
+ ++D + G +YFFKG + K ++ S++ K S W+ C
Sbjct: 612 NAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSD--WLGC 661
>sp|P33434|MMP2_MOUSE 72 kDa type IV collagenase OS=Mus musculus GN=Mmp2 PE=2 SV=1
Length = 662
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 232 PDTC--DTSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHIDA 289
P+ C D +D IA IR E+F FKDR++WR P P+L+ FW ELP IDA
Sbjct: 468 PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEK---IDA 524
Query: 290 VYQR-IDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYL 348
VY+ + FF G +Y+++ L GYP+PLT+LGLP ++++DAA W N KTY+
Sbjct: 525 VYEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQQVDAAFNWSKNKKTYI 584
Query: 349 FSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGA-TYFFKGKGFWKFKD 407
F+G ++W+ ++ + +P +P+ + ++W + ++D + G +YFFKG + K ++
Sbjct: 585 FAGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLEN 644
Query: 408 VSMRVEKEKPSPSAQFWMKC 427
S++ K S W+ C
Sbjct: 645 QSLKSVKFGSIKSD--WLGC 662
>sp|Q6Y4Q5|MMP3_CANFA Stromelysin-1 OS=Canis familiaris GN=MMP3 PE=2 SV=1
Length = 478
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 226 PGPSDKPDTCD--TSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHN 283
PGP P CD S+DAI+ +R E FKDR WR + + PG+ LI FW LP
Sbjct: 283 PGPG-TPAACDPTLSFDAISTLRGEFLFFKDRHFWRKSLRTLEPGF-YLISSFWPSLPSG 340
Query: 284 LTHIDAVYQRIDNHIAF-FIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGY 342
L DA Y+ I F F G Q++ G + GYP+ + LG P ++++IDAA+
Sbjct: 341 L---DAAYEETSKDIVFIFKGNQFWAMRGTEVQAGYPKGIHTLGFPPTVKKIDAAVFDKE 397
Query: 343 NSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGF 402
KTY F G +YW+ D++ EP +P+ + E++ GV +D AF+ G YFF G
Sbjct: 398 KKKTYFFVGDKYWRFDEKRQSMEPGFPKQIAEDFPGVDSKVDAAFE-AFGFYYFFNGSSQ 456
Query: 403 WKFKDVSMRVEKEKPSPSAQFWMKC 427
+F + +V S S W+ C
Sbjct: 457 LEFDPNAKKVTHVLKSNS---WLNC 478
>sp|P45452|MMP13_HUMAN Collagenase 3 OS=Homo sapiens GN=MMP13 PE=1 SV=1
Length = 471
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 113/204 (55%), Gaps = 10/204 (4%)
Query: 222 GESNPGPS--DKPDTCD--TSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFW 277
G+ +P P PD CD S DAI +R E +FKDR+ WR+ + V L FW
Sbjct: 269 GDEDPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFW 327
Query: 278 SELPHNLTHIDAVYQRIDNHIAF-FIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDA 336
ELP+ IDA Y+ + + F F GR+++ G +L GYP+ ++ LGLP +++I A
Sbjct: 328 PELPNR---IDAAYEHPSHDLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISA 384
Query: 337 AMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYF 396
A+ + KT LFSG + W+ DD + DYPR + E++ G+G +D ++ K+G YF
Sbjct: 385 AVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYE-KNGYIYF 443
Query: 397 FKGKGFWKFKDVSMRVEKEKPSPS 420
F G +++ S R+ + P+ S
Sbjct: 444 FNGPIQFEYSIWSNRIVRVMPANS 467
>sp|P23097|MMP13_RAT Collagenase 3 (Fragment) OS=Rattus norvegicus GN=Mmp13 PE=1 SV=1
Length = 466
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 10/204 (4%)
Query: 222 GESNPGPS--DKPDTCD--TSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFW 277
G+ +P P P+ CD S DAI +R E +FKDR+ WR+ + V P L FW
Sbjct: 264 GDEDPNPKHPKTPEKCDPALSLDAITSLRGETMIFKDRFFWRLHPQQVEPEL-FLTKSFW 322
Query: 278 SELPHNLTHIDAVYQRIDNHIAF-FIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDA 336
ELP+ H+DA Y+ + F F GR+++ G ++ GYPR ++ LG P ++R+ A
Sbjct: 323 PELPN---HVDAAYEHPSRDLMFIFRGRKFWALNGYDIMEGYPRKISDLGFPKEVKRLSA 379
Query: 337 AMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYF 396
A+ + KT FSG W DD + DYPR + E + G+G +D ++ K+G YF
Sbjct: 380 AVHFEDTGKTLFFSGNHVWSYDDANQTMDKDYPRLIEEEFPGIGDKVDAVYE-KNGYIYF 438
Query: 397 FKGKGFWKFKDVSMRVEKEKPSPS 420
F G +++ S R+ + P+ S
Sbjct: 439 FNGPIQFEYSIWSNRIVRVMPTNS 462
>sp|O18927|MMP13_HORSE Collagenase 3 OS=Equus caballus GN=MMP13 PE=2 SV=1
Length = 472
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 222 GESNPGPS--DKPDTCD--TSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFW 277
G+ +P P PD CD S DAI +R E VFKDR+ WR+ + ++ L FW
Sbjct: 270 GDEDPNPKHPKTPDKCDPSLSLDAITSLRGETMVFKDRFFWRLHPQ-LVDAELFLTKSFW 328
Query: 278 SELPHNLTHIDAVYQRIDNHIAF-FIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDA 336
ELP+ IDA Y+ + F F GR+++ G +L GYP+ ++ LG P +++I A
Sbjct: 329 PELPN---RIDAAYEHPSKDLIFIFRGRKFWALNGYDILEGYPQKISELGFPKDVKKISA 385
Query: 337 AMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYF 396
A+ + KT FSG + W+ DD + DYPR + E++ G+G +D ++ K+G YF
Sbjct: 386 AVHFEDTGKTLFFSGNQVWRYDDTNRMMDKDYPRLIEEDFPGIGDKVDAVYE-KNGYIYF 444
Query: 397 FKGKGFWKFKDVSMRVEKEKPSPS 420
F G +++ S R+ + P+ S
Sbjct: 445 FNGPIQFEYSIWSNRIVRVMPTNS 468
>sp|P03957|MMP3_RAT Stromelysin-1 OS=Rattus norvegicus GN=Mmp3 PE=1 SV=1
Length = 475
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 100/191 (52%), Gaps = 9/191 (4%)
Query: 238 SYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHIDAVYQRIDNH 297
S+DA++ +R EV FKDR WR + PG+ LI FW LP N+ DA Y+ +
Sbjct: 293 SFDAVSTLRGEVLFFKDRHFWRKSLRTPEPGF-YLISSFWPSLPSNM---DAAYEVTNRD 348
Query: 298 IAFFI-GRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYLFSGTRYWK 356
F + G Q + G L GYP+ + LGLP ++++IDAA+ KTY F ++W+
Sbjct: 349 TVFILKGNQIWAIRGHEELAGYPKSIHTLGLPETVQKIDAAISLKDQKKTYFFVEDKFWR 408
Query: 357 LDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFWKFKDVSMRVEKEK 416
D++ +P++PR + EN+ G+G +D F+ G YFF G +F + +V
Sbjct: 409 FDEKKQSMDPEFPRKIAENFPGIGTKVDAVFE-AFGFLYFFSGSSQLEFDPNAGKVTHIL 467
Query: 417 PSPSAQFWMKC 427
S S W C
Sbjct: 468 KSNS---WFNC 475
>sp|P33435|MMP13_MOUSE Collagenase 3 OS=Mus musculus GN=Mmp13 PE=1 SV=1
Length = 472
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 10/204 (4%)
Query: 222 GESNPGPS--DKPDTCD--TSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFW 277
G+ +P P P+ CD S DAI +R E +FKDR+ WR+ + V L FW
Sbjct: 270 GDEDPNPKHPKTPEKCDPALSLDAITSLRGETMIFKDRFFWRLHPQQV-EAELFLTKSFW 328
Query: 278 SELPHNLTHIDAVYQRIDNHIAF-FIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDA 336
ELP+ H+DA Y+ + F F GR+++ G +L GYPR ++ LG P ++R+ A
Sbjct: 329 PELPN---HVDAAYEHPSRDLMFIFRGRKFWALNGYDILEGYPRKISDLGFPKEVKRLSA 385
Query: 337 AMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYF 396
A+ + KT FS W DD + DYPR + E + G+G +D ++ K+G YF
Sbjct: 386 AVHFENTGKTLFFSENHVWSYDDVNQTMDKDYPRLIEEEFPGIGNKVDAVYE-KNGYIYF 444
Query: 397 FKGKGFWKFKDVSMRVEKEKPSPS 420
F G +++ S R+ + P+ S
Sbjct: 445 FNGPIQFEYSIWSNRIVRVMPTNS 468
>sp|O88766|MMP8_RAT Neutrophil collagenase OS=Rattus norvegicus GN=Mmp8 PE=2 SV=1
Length = 466
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 116/250 (46%), Gaps = 40/250 (16%)
Query: 199 YPDIARAEPRTTPTTTTPPATRRG-ESNPGPSDKP---------DTCD--TSYDAIAVIR 246
YP+ A EP T + P G ++ GPSD P CD +DA +R
Sbjct: 237 YPNYAYREPSTY---SLPQDDINGIQTIYGPSDNPVQPTGPSTPTACDPHLRFDAATTLR 293
Query: 247 TEVFVFKDRWMWRIGDKGVLPGYPVL-------IHQFWSELPHNLTHIDAVYQRIDNHIA 299
E++ FKD++ WR +P L I FW LP+ L A Y+ D +
Sbjct: 294 GEIYFFKDKYFWR--------RHPQLRTVDLNFISLFWPFLPNGL---QAAYEDFDRDLV 342
Query: 300 F-FIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYLFSGTRYWKLD 358
F F GRQY+ L GYPR ++ G P S++ IDAA+ YN KTY F + W+ D
Sbjct: 343 FLFKGRQYWALSAYDLQQGYPRDISNYGFPRSVQAIDAAV--SYNGKTYFFVNNQCWRYD 400
Query: 359 DETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFWKFKDVSMRVEKEKPS 418
++ +P YP ++ + G+ ID FQ +D FF G ++ F VS RV + S
Sbjct: 401 NQRRSMDPGYPTSIASVFPGINCRIDAVFQ-QDSFFLFFSGPQYFAFNLVSRRVTRVARS 459
Query: 419 PSAQFWMKCP 428
W+ CP
Sbjct: 460 ---NLWLNCP 466
>sp|O62806|MMP13_RABIT Collagenase 3 OS=Oryctolagus cuniculus GN=MMP13 PE=2 SV=1
Length = 471
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 108/204 (52%), Gaps = 10/204 (4%)
Query: 222 GESNPGPS--DKPDTCD--TSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFW 277
G+ +P P PD CD S DAI +R E +FKDR+ WR+ + V L FW
Sbjct: 269 GDEDPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFW 327
Query: 278 SELPHNLTHIDAVYQRIDNHIAF-FIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDA 336
ELP+ IDA Y+ + F F G++++ G +L GYP+ L+ LG P +++I A
Sbjct: 328 PELPN---RIDAAYEHPARDLIFIFRGKKFWAPNGYDILEGYPQKLSELGFPREVKKISA 384
Query: 337 AMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYF 396
A+ + KT FSG + W DD + DYPR + E + G+G +D ++ K+G YF
Sbjct: 385 AVHFEDTGKTLFFSGNQVWSYDDTNHTMDQDYPRLIEEEFPGIGGKVDAVYE-KNGYIYF 443
Query: 397 FKGKGFWKFKDVSMRVEKEKPSPS 420
F G +++ S R+ + P+ S
Sbjct: 444 FNGPIQFEYSIWSKRIVRVMPTNS 467
>sp|P28862|MMP3_MOUSE Stromelysin-1 OS=Mus musculus GN=Mmp3 PE=2 SV=2
Length = 477
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 11/221 (4%)
Query: 210 TPTTTTPPATRRGESNPGPSDKPDTCDTS--YDAIAVIRTEVFVFKDRWMWRIGDKGVLP 267
TPT + +SN + C ++ +DA++ +R EV FKDR WR + P
Sbjct: 265 TPTASPDVLVVPTKSNSLEPETSPMCSSTLFFDAVSTLRGEVLFFKDRHFWRKSLRTPEP 324
Query: 268 GYPVLIHQFWSELPHNLTHIDAVYQRIDNHIAF-FIGRQYFLFEGIRLLPGYPRPLTALG 326
+ LI FW LP N+ DA Y+ + F F G Q++ G L GYP+ + LG
Sbjct: 325 EF-YLISSFWPSLPSNM---DAAYEVTNRDTVFIFKGNQFWAIRGHEELAGYPKSIHTLG 380
Query: 327 LPASLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDA 386
LPA++++IDAA+ KTY F +YW+ D++ EP +PR + E++ GV +D
Sbjct: 381 LPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQSMEPGFPRKIAEDFPGVDSRVDAV 440
Query: 387 FQWKDGATYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKC 427
F+ G YFF G +F + +V S S W C
Sbjct: 441 FE-AFGFLYFFSGSSQLEFDPNAKKVTHILKSNS---WFNC 477
>sp|P03956|MMP1_HUMAN Interstitial collagenase OS=Homo sapiens GN=MMP1 PE=1 SV=3
Length = 469
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 232 PDTCDT--SYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVL----IHQFWSELPHNLT 285
P CD+ ++DAI IR EV FKDR+ R P YP + I FW +LP+ L
Sbjct: 275 PKACDSKLTFDAITTIRGEVMFFKDRFYMRTN-----PFYPEVELNFISVFWPQLPNGL- 328
Query: 286 HIDAVYQRID-NHIAFFIGRQYFLFEGIRLLPGYPRPL-TALGLPASLERIDAAMVWGYN 343
+A Y+ D + + FF G +Y+ +G +L GYP+ + ++ G P +++ IDAA+
Sbjct: 329 --EAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENT 386
Query: 344 SKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFW 403
KTY F +YW+ D+ +P YP+ + ++ G+G +D F KDG YFF G +
Sbjct: 387 GKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM-KDGFFYFFHGTRQY 445
Query: 404 KFKDVSMRVEKEKPSPSAQFWMKC 427
KF + R+ + + S W C
Sbjct: 446 KFDPKTKRILTLQKANS---WFNC 466
>sp|O70138|MMP8_MOUSE Neutrophil collagenase OS=Mus musculus GN=Mmp8 PE=2 SV=2
Length = 465
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 116/249 (46%), Gaps = 40/249 (16%)
Query: 199 YPDIARAEPRTTPTTTTPPATRRG-ESNPGPSDKP---------DTCD--TSYDAIAVIR 246
YP+ A EP T + P G ++ GPSD P CD +DA +R
Sbjct: 236 YPNYAYREPSTY---SLPQDDINGIQTIYGPSDNPIQPTGPSTPKACDPHLRFDATTTLR 292
Query: 247 TEVFVFKDRWMWRIGDKGVLPGYPVL-------IHQFWSELPHNLTHIDAVYQRIDNHIA 299
E++ FKD++ WR +P L I FW LP+ L A Y+ D +
Sbjct: 293 GEIYFFKDKYFWR--------RHPQLRTVDLNFISLFWPFLPNGL---QAAYEDFDRDLV 341
Query: 300 F-FIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTYLFSGTRYWKLD 358
F F GRQY+ G L GYPR ++ G P S++ IDAA+ YN KTY F + W+ D
Sbjct: 342 FLFKGRQYWALSGYDLQQGYPRDISNYGFPRSVQAIDAAV--SYNGKTYFFINNQCWRYD 399
Query: 359 DETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFWKFKDVSMRVEKEKPS 418
++ +P YP+++ + GV +D F +D FF G ++ F VS RV + S
Sbjct: 400 NQRRSMDPGYPKSIPSMFPGVNCRVDAVF-LQDSFFLFFSGPQYFAFNFVSHRVTRVARS 458
Query: 419 PSAQFWMKC 427
W+ C
Sbjct: 459 ---NLWLNC 464
>sp|Q9XSZ5|MMP1_HORSE Interstitial collagenase OS=Equus caballus GN=MMP1 PE=2 SV=1
Length = 469
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 18/203 (8%)
Query: 232 PDTCDT--SYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPV----LIHQFWSELPHNLT 285
P+ CD+ ++DAI IR EV FKDR+ RI P YP I FW +LP+ L
Sbjct: 275 PEVCDSKLTFDAITTIRGEVMFFKDRFYMRIN-----PYYPEAELNFISIFWPQLPNGLQ 329
Query: 286 HIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLT-ALGLPASLERIDAAMVWGYNS 344
V R + + FF G +Y+ +G +L GYP+ + + G P++++ IDAA+
Sbjct: 330 AAYEVSHR--DEVRFFKGNKYWAVKGQDVLYGYPKDIHRSFGFPSTVKNIDAAVSEEDTG 387
Query: 345 KTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFWK 404
KTY F +YW+ D+ + YP+ + +++ G+G +D FQ KDG YFF G +K
Sbjct: 388 KTYFFVADKYWRYDEYKRSMDAGYPKMIADDFPGIGDKVDAVFQ-KDGFFYFFHGTRQYK 446
Query: 405 FKDVSMRVEKEKPSPSAQFWMKC 427
F + R+ + + S W C
Sbjct: 447 FDPKTKRILTLQKANS---WFNC 466
>sp|Q10835|MMP13_XENLA Collagenase 3 (Fragment) OS=Xenopus laevis GN=mmp13 PE=2 SV=1
Length = 469
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 10/198 (5%)
Query: 222 GESNPGPS--DKPDTCD--TSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFW 277
G +P P P+ CD S DAI +R E +FKDR+ WR+ + + VLI FW
Sbjct: 267 GNRDPHPKHPKTPEKCDPDLSIDAITELRGEKMIFKDRFFWRVHPQ-MTDAELVLIKSFW 325
Query: 278 SELPHNLTHIDAVYQRIDNHIAF-FIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDA 336
ELP+ L DA Y+ +++ F G++++ G ++ YP+ L LG P +L+ IDA
Sbjct: 326 PELPNKL---DAAYEHPAKDLSYLFRGKKFWALNGYDIVEDYPKKLHELGFPKTLKAIDA 382
Query: 337 AMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYF 396
A+ KT+ F+ YW D+E + +PR ++E++ G+G +D A+Q ++G YF
Sbjct: 383 AVYNKDTGKTFFFTEDSYWSFDEEARTLDKGFPRLISEDFPGIGEKVDAAYQ-RNGYLYF 441
Query: 397 FKGKGFWKFKDVSMRVEK 414
F G +++ S R+ +
Sbjct: 442 FNGALQFEYSIWSQRITR 459
>sp|P22894|MMP8_HUMAN Neutrophil collagenase OS=Homo sapiens GN=MMP8 PE=1 SV=1
Length = 467
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 110/218 (50%), Gaps = 32/218 (14%)
Query: 224 SNP----GPSDKPDTCDTS--YDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVL----- 272
SNP GPS P CD S +DAI +R E+ FKDR+ WR +P L
Sbjct: 265 SNPIQPTGPS-TPKPCDPSLTFDAITTLRGEILFFKDRYFWR--------RHPQLQRVEM 315
Query: 273 --IHQFWSELPHNLTHIDAVYQRIDNHIAF-FIGRQYFLFEGIRLLPGYPRPLTALGLPA 329
I FW LP T I A Y+ D + F F G QY+ G +L GYP+ ++ G P+
Sbjct: 316 NFISLFWPSLP---TGIQAAYEDFDRDLIFLFKGNQYWALSGYDILQGYPKDISNYGFPS 372
Query: 330 SLERIDAAMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQW 389
S++ IDAA+ Y SKTY F ++W+ D++ EP YP++++ + G+ +D FQ
Sbjct: 373 SVQAIDAAVF--YRSKTYFFVNDQFWRYDNQRQFMEPGYPKSISGAFPGIESKVDAVFQ- 429
Query: 390 KDGATYFFKGKGFWKFKDVSMRVEKEKPSPSAQFWMKC 427
++ + F G ++ F ++ RV + W+ C
Sbjct: 430 QEHFFHVFSGPRYYAFDLIAQRVTR---VARGNKWLNC 464
>sp|O13065|MMP18_XENLA Matrix metalloproteinase-18 OS=Xenopus laevis GN=mmp18 PE=2 SV=1
Length = 467
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 16/211 (7%)
Query: 224 SNP----GPSDKPDTCD--TSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFW 277
SNP GPS P CD ++A+ +R E+ F R++WR + + + FW
Sbjct: 266 SNPVQPTGPS-TPSRCDPNVVFNAVTTMRGELIFFVKRFLWRKHPQAS-EAELMFVQAFW 323
Query: 278 SELPHNLTHIDAVYQR-IDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDA 336
LP T+IDA Y+ I I F G +Y +G ++ GYPR + +LG P +++RIDA
Sbjct: 324 PSLP---TNIDAAYENPITEQILVFKGSKYTALDGFDVVQGYPRNIYSLGFPKTVKRIDA 380
Query: 337 AMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYF 396
A+ KTY F+ +YW D++ + + +P+ ++ ++ G+ ID AF ++ G YF
Sbjct: 381 AVHIEQLGKTYFFAAKKYWSYDEDKKQMDKGFPKQISNDFPGIPDKIDAAFYYR-GRLYF 439
Query: 397 FKGKGFWKFKDVSMRVEKEKPSPSAQFWMKC 427
F G+ +++ S R+ + S S W+ C
Sbjct: 440 FIGRSQFEYNINSKRIVQVLRSNS---WLGC 467
>sp|Q99542|MMP19_HUMAN Matrix metalloproteinase-19 OS=Homo sapiens GN=MMP19 PE=1 SV=1
Length = 508
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 229 SDKPDTCDTSYDAIAVI-RTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHI 287
S PD C + DA+ + R + + FK ++W + D G PG + W LP NL
Sbjct: 283 SPMPDPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDA- 339
Query: 288 DAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKTY 347
AVY I FF G + + + ++ PG+P+ L + +DAA+ W N K +
Sbjct: 340 -AVYSPRTQWIHFFKGDKVWRYINFKMSPGFPKKLNRVE-----PNLDAALYWPLNQKVF 393
Query: 348 LFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFWKFKD 407
LF G+ YW+ D+ YP+ + + GV A W+DG YFFKGK +W+
Sbjct: 394 LFKGSGYWQWDELARTDFSSYPKPIKGLFTGVPNQPSAAMSWQDGRVYFFKGKVYWRLNQ 453
Query: 408 VSMRVEKEKPSPSAQFWMKC 427
+RVEK P + WM C
Sbjct: 454 -QLRVEKGYPRNISHNWMHC 472
>sp|P39900|MMP12_HUMAN Macrophage metalloelastase OS=Homo sapiens GN=MMP12 PE=1 SV=1
Length = 470
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 21/271 (7%)
Query: 167 NQYPETPHEPRRDSPPRHPNQFPETPRKPPARYPDI-----ARAEPRTTPTTTTPPATRR 221
N + HE H + P+ P +Y DI + + R + P +
Sbjct: 211 NLFLTAVHEIGHSLGLGHSSD-PKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQ 269
Query: 222 GESNPGPSDKPDTCD--TSYDAIAVIRTEVFVFKDRWMW-RIGDKGVLPGYPV-LIHQFW 277
NP S+ P CD S+DA+ + ++F FKDR+ W ++ ++ P V LI W
Sbjct: 270 RLPNPDNSE-PALCDPNLSFDAVTTVGNKIFFFKDRFFWLKVSER---PKTSVNLISSLW 325
Query: 278 SELPHNLTHIDAVYQ-RIDNHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDA 336
LP + I+A Y+ N + F +Y+L +R P YP+ + + G P +++IDA
Sbjct: 326 PTLP---SGIEAAYEIEARNQVFLFKDDKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDA 382
Query: 337 AMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYF 396
A+ +TY F +YW+ D+ +P YP+ +T+N++G+G ID F K+ YF
Sbjct: 383 AVFNPRFYRTYFFVDNQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYF 442
Query: 397 FKGKGFWKFKDVSMRVEKEKPSPSAQFWMKC 427
F+G +++ + R+ K S S W C
Sbjct: 443 FQGSNQFEYDFLLQRITKTLKSNS---WFGC 470
>sp|P28863|MMP3_RABIT Stromelysin-1 OS=Oryctolagus cuniculus GN=MMP3 PE=2 SV=1
Length = 478
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Query: 223 ESNPGPSDKPDTCD--TSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSEL 280
E P S P CD S+DAI+ +R E+ FKDR+ WR + + P + LI FW L
Sbjct: 279 EPVPPGSGTPVMCDPDLSFDAISTLRGEILFFKDRYFWRKSLRILEPEFH-LISSFWPSL 337
Query: 281 PHNLTHIDAVYQRIDNHIAF-FIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMV 339
P + +DA Y+ I F F G Q++ G + GYPR + LG P+++ +IDAA+
Sbjct: 338 P---SAVDAAYEVISRDTVFIFKGTQFWAIRGNEVQAGYPRSIHTLGFPSTIRKIDAAIS 394
Query: 340 WGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDID 384
KTY F +YW+ D++ EP +PR++ E++ G+ ID
Sbjct: 395 DKERKKTYFFVEDKYWRFDEKRQSLEPGFPRHIAEDFPGINPKID 439
>sp|O55123|MMP10_MOUSE Stromelysin-2 OS=Mus musculus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 11/201 (5%)
Query: 230 DKPDTCD--TSYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVLIHQFWSELPHNLTHI 287
+ PD CD S+D+++ +R EV FKDR+ WR P + LI FW LP +L
Sbjct: 284 ETPDKCDPALSFDSVSTLRGEVLFFKDRYFWRRSHWNPEPEFH-LISAFWPTLPSDL--- 339
Query: 288 DAVYQRID-NHIAFFIGRQYFLFEGIRLLPGYPRPLTALGLPASLERIDAAMVWGYNSKT 346
DA Y+ + + + F G Q++ G + GYP+ + LG P ++++IDAA+ KT
Sbjct: 340 DAAYEAHNTDSVLIFKGSQFWAVRGNEVQAGYPKGIHTLGFPPTVKKIDAAVFEKEKKKT 399
Query: 347 YLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFWKFK 406
Y F G +YW+ D+ + +PR +T+++ G+ +D + G YFF+G ++F
Sbjct: 400 YFFVGDKYWRFDETRHVMDKGFPRQITDDFPGIEPQVDAVLH-EFGFFYFFRGSSQFEFD 458
Query: 407 DVSMRVEKEKPSPSAQFWMKC 427
+ V S S W+ C
Sbjct: 459 PNARTVTHILKSNS---WLLC 476
>sp|P13943|MMP1_RABIT Interstitial collagenase OS=Oryctolagus cuniculus GN=MMP1 PE=2 SV=1
Length = 468
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 224 SNPGPSDKPDTCDT--SYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVL----IHQFW 277
S P P CD+ ++DAI IR E+ FKDR+ R P Y + I FW
Sbjct: 266 SQPVGPQTPKVCDSKLTFDAITTIRGEIMFFKDRFYMRAN-----PYYSEVELNFISVFW 320
Query: 278 SELPHNLTHIDAVYQRIDNHIAFFIGRQYFLFEGIRLLPGYPRPL-TALGLPASLERIDA 336
LP+ L V R + I FF G +Y+ +G LPGYP+ + ++ G P S+ IDA
Sbjct: 321 PHLPNGLQAAYEVAHR--DEILFFKGNKYWTVQGQNELPGYPKDIHSSFGFPRSVNHIDA 378
Query: 337 AMVWGYNSKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYF 396
A+ KTY F +YW+ D+ + YP+ + ++ G+G +D F+ KDG YF
Sbjct: 379 AVSEEDTGKTYFFVANKYWRYDEYKRSMDAGYPKMIEYDFPGIGNKVDAVFK-KDGFFYF 437
Query: 397 FKGKGFWKFKDVSMRVEKEKPSPSAQFWMKC 427
F G +KF + R+ + + S W C
Sbjct: 438 FHGTRQYKFDPKTKRILTLQKANS---WFNC 465
>sp|P28053|MMP1_BOVIN Interstitial collagenase OS=Bos taurus GN=MMP1 PE=1 SV=1
Length = 469
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 232 PDTCDT--SYDAIAVIRTEVFVFKDRWMWRIGDKGVLPGYPVL----IHQFWSELPHNLT 285
P+ CD+ ++DAI IR EV FKDR+ R P YP + I FW +LP+ L
Sbjct: 275 PEVCDSKLTFDAITTIRGEVMFFKDRFYMRTN-----PLYPEVELNFISVFWPQLPNGL- 328
Query: 286 HIDAVYQRID-NHIAFFIGRQYFLFEGIRLLPGYPRPLT-ALGLPASLERIDAAMVWGYN 343
A Y+ D + + FF G +Y+ +G +L GYPR + + G P +++ IDAA+
Sbjct: 329 --QAAYEVADRDEVRFFKGNKYWAVKGQDVLRGYPRDIYRSFGFPRTVKSIDAAVSEEDT 386
Query: 344 SKTYLFSGTRYWKLDDETGRSEPDYPRNMTENWRGVGVDIDDAFQWKDGATYFFKGKGFW 403
KTY F + W+ D+ + YP+ + E++ G+G +D FQ K G YFF G+ +
Sbjct: 387 GKTYFFVANKCWRYDEYKQSMDAGYPKMIAEDFPGIGNKVDAVFQ-KGGFFYFFHGRRQY 445
Query: 404 KFKDVSMRVEKEKPSPSAQFWMKC 427
KF + R+ + S W C
Sbjct: 446 KFDPQTKRILTLLKANS---WFNC 466
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,089,574
Number of Sequences: 539616
Number of extensions: 11979673
Number of successful extensions: 62288
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 1650
Number of HSP's that attempted gapping in prelim test: 41855
Number of HSP's gapped (non-prelim): 10631
length of query: 530
length of database: 191,569,459
effective HSP length: 122
effective length of query: 408
effective length of database: 125,736,307
effective search space: 51300413256
effective search space used: 51300413256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)