BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12291
(404 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8R5M3|LRC15_RAT Leucine-rich repeat-containing protein 15 OS=Rattus norvegicus
GN=Lrrc15 PE=2 SV=1
Length = 578
Score = 178 bits (452), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 173/330 (52%), Gaps = 1/330 (0%)
Query: 55 NQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFK 114
NQL + F+ L EL+L N+L +P + F + L+ ++L +N L F+
Sbjct: 135 NQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQ 194
Query: 115 GAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQS 174
L V++L N + +P F L +L+EL L +N + ++ G F +L+RL L +
Sbjct: 195 HLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSN 254
Query: 175 NRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFS 234
N I+QLPPGIF L L+ L+L N L + PG+F +L L L N I+SL + FS
Sbjct: 255 NHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFS 314
Query: 235 QLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNN 294
L L+ L L N + I G+F L +L +L L++N +Q+L + F L NL + L +
Sbjct: 315 HLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQS 374
Query: 295 NLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYM 354
N LR L F + L +QL +N L+ L L NL L+L NPW CD IL +
Sbjct: 375 NRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHLVNLCELRLYDNPWRCDSDILPL 434
Query: 355 ARWLRANRRKVW-DSKPTCRGPGNLGGKSV 383
WL NR ++ D+ P C P N+ G+S+
Sbjct: 435 HNWLLLNRARLGTDTLPVCSSPANVRGQSL 464
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 143/270 (52%)
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L++ H++ELP LF++ L + + +N + T+ F+ L + L+ N + LP
Sbjct: 58 LQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLP 117
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
VF D+ +LE L LS N L IQ FS +L+ L+L N + +P FD L L
Sbjct: 118 IRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTK 177
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIP 253
L+L N + + P LF + +L L L EN +S + F L +L+EL L +N I T+
Sbjct: 178 LNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLS 237
Query: 254 AGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKK 313
G F N ++L++L+L +N+I +L G F L L L L N LR L F PM +L++
Sbjct: 238 PGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRE 297
Query: 314 LQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
L L +N + LA ++ S L L L L+ N
Sbjct: 298 LWLYNNHITSLADNTFSHLNQLQVLILSHN 327
>sp|Q80X72|LRC15_MOUSE Leucine-rich repeat-containing protein 15 OS=Mus musculus GN=Lrrc15
PE=2 SV=1
Length = 579
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 185/370 (50%), Gaps = 2/370 (0%)
Query: 16 GPCRCRPEIHTLSCWKQDMEELPFDQIIPVD-IRVIDLGINQLSTLSKDAFTGLYKLTEL 74
G R + LS ++ LP V+ + + L NQL + F+ L EL
Sbjct: 95 GAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKEL 154
Query: 75 KLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPA 134
+L N+L +P +F + L+ ++L N L F+ L V++L N + +P
Sbjct: 155 QLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPM 214
Query: 135 NVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFL 194
F L +L+EL L +N + ++ G F +L+RL L +N I+ LPPGIF L +L+ L
Sbjct: 215 GTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKL 274
Query: 195 SLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPA 254
+L N L + PG+F +L L L N I+SL + FS L L+ L L N + I
Sbjct: 275 TLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISP 334
Query: 255 GSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKL 314
G+F L +L +L L++N +Q+L F L NL + L NN LR L F + L +
Sbjct: 335 GAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTI 394
Query: 315 QLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVW-DSKPTCR 373
QL +N L+ L L NL L+L NPW CD IL + WL NR ++ D+ P C
Sbjct: 395 QLQNNNLENLPLGIFDHLGNLCELRLYDNPWRCDSNILPLHDWLILNRARLGTDTLPVCS 454
Query: 374 GPGNLGGKSV 383
P ++ G+S+
Sbjct: 455 SPASVRGQSL 464
>sp|Q8TF66|LRC15_HUMAN Leucine-rich repeat-containing protein 15 OS=Homo sapiens GN=LRRC15
PE=1 SV=2
Length = 581
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 169/320 (52%), Gaps = 1/320 (0%)
Query: 65 FTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQL 124
F+ L EL+L NHL +P F + L+ ++L +N + + F+ L V++L
Sbjct: 145 FSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRL 204
Query: 125 SYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGI 184
N + +P F L++L+EL L QN + + G F ++L+RL L +N I+QLPP +
Sbjct: 205 YENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSV 264
Query: 185 FDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHL 244
F L L+ L+L N L + PG+F +L L L +N ISSL + FS L L+ L L
Sbjct: 265 FMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLIL 324
Query: 245 GQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKA 304
+N I I G+F L L +L L++N +Q+L F L NL + L NN LR L
Sbjct: 325 SRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNI 384
Query: 305 FEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRK 364
F + L +QL +N+L+ L L L L+L NPW CD IL + WL N+ +
Sbjct: 385 FANVNGLMAIQLQNNQLENLPLGIFDHLGKLCELRLYDNPWRCDSDILPLRNWLLLNQPR 444
Query: 365 VW-DSKPTCRGPGNLGGKSV 383
+ D+ P C P N+ G+S+
Sbjct: 445 LGTDTVPVCFSPANVRGQSL 464
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 137/270 (50%)
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L++ H++EL F++ L + + +N + + F+ L + L+ N ++ LP
Sbjct: 58 LQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLP 117
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
+F L SLE L LS N L IQ FS +LK L+L N + +P G FD L L
Sbjct: 118 IGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTK 177
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIP 253
L+L N L+ I P +F + +L L L EN ++ + F L +L+EL L QN I +
Sbjct: 178 LNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLS 237
Query: 254 AGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKK 313
G F N +L++L+L +N+I +L F L L L L N L+ L F PM +L++
Sbjct: 238 PGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRE 297
Query: 314 LQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
L L N + L + S L L L L++N
Sbjct: 298 LWLYDNHISSLPDNVFSNLRQLQVLILSRN 327
>sp|Q9DBB9|CPN2_MOUSE Carboxypeptidase N subunit 2 OS=Mus musculus GN=Cpn2 PE=1 SV=2
Length = 547
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 171/342 (50%), Gaps = 24/342 (7%)
Query: 50 IDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLP 109
+ L ++L+ L +D F + L L+L+ N L LPG+LF S +L T++L+QNL+ LP
Sbjct: 126 LTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLP 185
Query: 110 STFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKR 169
F+ L +++LS N + LP L SL+EL L N +T + FS ++SL+
Sbjct: 186 KGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEM 245
Query: 170 LKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLN 229
L LQ N I LP +F L L FLSL++N L + GLF + + L L LS N + ++
Sbjct: 246 LWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIP 305
Query: 230 GDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTA 289
F+ L+ L L L N I +P F NL+ L KL L SNN+ LH F L+ L
Sbjct: 306 EGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQL 365
Query: 290 LFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDC 349
L L+ N L L F D+N +L L L NPW CDC
Sbjct: 366 LNLSRNQLTTLPGGIF-----------DTNY-------------DLFNLALLGNPWQCDC 401
Query: 350 AILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMSFDDL 391
+ Y+ WLR ++ ++ C GP L G+ V ++ + L
Sbjct: 402 HLSYLTSWLRLYNNQISNTHTFCAGPAYLKGQLVPNLKQEQL 443
>sp|P22792|CPN2_HUMAN Carboxypeptidase N subunit 2 OS=Homo sapiens GN=CPN2 PE=1 SV=3
Length = 545
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 169/342 (49%), Gaps = 2/342 (0%)
Query: 48 RVIDLGINQLS--TLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLI 105
R+ DL + S LS + F+ L L +L L N L LP LF L ++ L N +
Sbjct: 98 RLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQL 157
Query: 106 KTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMY 165
+ LP F+ L + L+ N + LP +FH L SL+ L LS N L+ + G F +
Sbjct: 158 QALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLG 217
Query: 166 SLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWI 225
SL+ L L SN I++LPP +F L L+ L L+ N ++ + +F +LTFL L N +
Sbjct: 218 SLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNML 277
Query: 226 SSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLT 285
L F+ L L L N +ET+ G+FA+L +L L L N I L AG F L
Sbjct: 278 RVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLE 337
Query: 286 NLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPW 345
L L+L +N L L F+ + L+ L L N+L L NL L L NPW
Sbjct: 338 ELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPW 397
Query: 346 HCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMS 387
CDC + Y+ WL+ ++ + + C GP L G+ V ++
Sbjct: 398 QCDCHLAYLFNWLQQYTDRLLNIQTYCAGPAYLKGQVVPALN 439
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 156/327 (47%), Gaps = 26/327 (7%)
Query: 17 PCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKL 76
P C + + C +++ +P D IP + I +TL AF LT++
Sbjct: 23 PMGCDCFVQEVFCSDEELATVPLD--IPPYTKNIIFVETSFTTLETRAFGSNPNLTKV-- 78
Query: 77 RKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANV 136
+F++T L + P F G RL ++++ ++ +L N+
Sbjct: 79 -----------VFLNT----------QLCQFRPDAF-GGLPRLEDLEVTGSSFLNLSTNI 116
Query: 137 FHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSL 196
F +L SL +L L+ N+L ++ G F + +L+ L LQ N++ LP +F L +L L+L
Sbjct: 117 FSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNL 176
Query: 197 RNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGS 256
N L+ + LF+ L L+LS N +S L F +L SL+EL L N I +P
Sbjct: 177 AQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQV 236
Query: 257 FANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQL 316
F+ L LE+L+L N I L FA L NLT L L N+LR L F L L L
Sbjct: 237 FSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSL 296
Query: 317 DSNKLQYLATDSLSLLPNLITLKLAKN 343
N+L+ +A + + L NL +L L+ N
Sbjct: 297 THNQLETVAEGTFAHLSNLRSLMLSYN 323
>sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus GN=Gp5 PE=2 SV=1
Length = 567
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 176/376 (46%), Gaps = 31/376 (8%)
Query: 45 VDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNL 104
V ++ + L N++S L + + L +L L N L +L LF NL + L+QN
Sbjct: 98 VKLKTLRLTRNKISRLPRAILDKMVLLEQLFLDHNALRDLDQNLFQQLRNLQELGLNQNQ 157
Query: 105 IKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGM 164
+ LP+ F L ++ LS N + LP + + LE+L L N LTS+ G S +
Sbjct: 158 LSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQVKLEKLLLYSNQLTSVDSGLLSNL 217
Query: 165 YSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENW 224
+L L+L+ N + + PG FD L L L+L N L + P LF + ++ L L EN
Sbjct: 218 GALTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNLLESLPPALFLHVSSVSRLTLFENP 277
Query: 225 ISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSN-NIQELHAGTFAG 283
+ L F ++ L+EL L ++ T+PA +F NL L+ L L N + L G F G
Sbjct: 278 LEELPDVLFGEMAGLRELWLNGTHLSTLPAAAFRNLSGLQTLGLTRNPRLSALPRGVFQG 337
Query: 284 LTNLTALFLNNNLLRYLDTKAFEPMLHLKKL------------------------QLDSN 319
L L L L+ N L L A + HL+++ QL+ N
Sbjct: 338 LRELRVLGLHTNALAELRDDALRGLGHLRQVSLRHNRLRALPRTLFRNLSSLESVQLEHN 397
Query: 320 KLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVW-DSKPTCRGPGNL 378
+L+ L D + LP L + L NPW CDC + +WLR + + D P CRGP
Sbjct: 398 QLETLPGDVFAALPQLTQVLLGHNPWLCDCGLWRFLQWLRHHPDILGRDEPPQCRGP--- 454
Query: 379 GGKSVEDMSFDDLCEG 394
+ +SF +L +G
Sbjct: 455 --EPRASLSFWELLQG 468
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%)
Query: 137 FHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSL 196
F + L+ LS + +++I GTF+ + LK L+L N+I++LP I D + L+ L L
Sbjct: 70 FSGMTVLQRQMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISRLPRAILDKMVLLEQLFL 129
Query: 197 RNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGS 256
+N L + LF ++L L L++N +S L + FS L LK L L +N + +P G
Sbjct: 130 DHNALRDLDQNLFQQLRNLQELGLNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGL 189
Query: 257 FANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQL 316
LEKL LYSN + + +G + L LT L L N LR + AF+ + +L L L
Sbjct: 190 LGAQVKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTL 249
Query: 317 DSNKLQYLATDSLSLLPNLITLKLAKNP 344
N L+ L + ++ L L +NP
Sbjct: 250 SGNLLESLPPALFLHVSSVSRLTLFENP 277
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 9/243 (3%)
Query: 91 STINLSTMDLSQNLIKTLPSTFFKGAIR------LTVVQ---LSYNAIESLPANVFHDLI 141
S +++ + L NL L +G +R +TV+Q LS + I ++ F+DL+
Sbjct: 39 SVAHIAELGLPTNLTHILLFRMDQGILRNHSFSGMTVLQRQMLSDSHISAIDPGTFNDLV 98
Query: 142 SLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRL 201
L+ L L++N ++ + M L++L L N + L +F L+ L L L N+L
Sbjct: 99 KLKTLRLTRNKISRLPRAILDKMVLLEQLFLDHNALRDLDQNLFQQLRNLQELGLNQNQL 158
Query: 202 SFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQ 261
SF+ LF+ + L L+LS N ++ L L++L L N + ++ +G +NL
Sbjct: 159 SFLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQVKLEKLLLYSNQLTSVDSGLLSNLG 218
Query: 262 SLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKL 321
+L +L L N+++ + G F L NL++L L+ NLL L F + + +L L N L
Sbjct: 219 ALTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNLLESLPPALFLHVSSVSRLTLFENPL 278
Query: 322 QYL 324
+ L
Sbjct: 279 EEL 281
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 124 LSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPG 183
+++ A LP N+ H L+ + Q +L + +FSGM L+R L + I+ + PG
Sbjct: 40 VAHIAELGLPTNLTHILL----FRMDQGIL---RNHSFSGMTVLQRQMLSDSHISAIDPG 92
Query: 184 IFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELH 243
F+DL L L L N++S + + + L L L N + L+ + F QL +L+EL
Sbjct: 93 TFNDLVKLKTLRLTRNKISRLPRAILDKMVLLEQLFLDHNALRDLDQNLFQQLRNLQELG 152
Query: 244 LGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTK 303
L QN + +PA F++L+ L+ L L NN+ L G L L L +N L +D+
Sbjct: 153 LNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQVKLEKLLLYSNQLTSVDSG 212
Query: 304 AFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
+ L +L+L+ N L+ +A + L NL +L L+ N
Sbjct: 213 LLSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTLSGN 252
>sp|O08770|GPV_RAT Platelet glycoprotein V OS=Rattus norvegicus GN=Gp5 PE=3 SV=1
Length = 567
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 179/379 (47%), Gaps = 32/379 (8%)
Query: 45 VDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNL 104
V ++ + L N++S L + + L +L L N L +L LF +NL + L+QN
Sbjct: 98 VKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQ 157
Query: 105 IKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGM 164
+ LP+ F +L V+ LS N + LP + I LE+L L N L S+ G + +
Sbjct: 158 LSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANL 217
Query: 165 YSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENW 224
+L L+L+ N + + PG FD L L L+L N L + P LF + LT L L EN
Sbjct: 218 GALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENP 277
Query: 225 ISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFL---------------- 268
+ L F ++ L+EL L ++ T+PA +F NL L+ L L
Sbjct: 278 LEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHG 337
Query: 269 ---------YSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSN 319
++N ++EL GL L + L +N LR L F + L +QL+ N
Sbjct: 338 LTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHN 397
Query: 320 KLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVW-DSKPTCRGPGNL 378
+L+ L D + LP L + L NPW CDC + +WLR + + D P C GP
Sbjct: 398 QLKTLPGDVFAALPQLTRVLLGHNPWLCDCGLWPFLQWLRHHLELLGRDEPPQCNGP--- 454
Query: 379 GGKSVEDMSFDDLCEG-QW 396
+S ++F +L +G QW
Sbjct: 455 --ESRASLTFWELLQGDQW 471
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 117/235 (49%), Gaps = 3/235 (1%)
Query: 132 LPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYL 191
L ++ F + L+ L LS + +++I GTF+ + LK L+L N+I+ LP I D + L
Sbjct: 65 LQSHSFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLL 124
Query: 192 DFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIET 251
+ L L +N L + LF +L L L++N +S L + FS L LK L L +N +
Sbjct: 125 EQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTH 184
Query: 252 IPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHL 311
+P G LEKL LYSN + L +G A L LT L L N LR + AF+ + +L
Sbjct: 185 LPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNL 244
Query: 312 KKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVW 366
L L N L+ L + L L L +NP +L+ A R++W
Sbjct: 245 STLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGE---MAGLRELW 296
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 118/245 (48%), Gaps = 5/245 (2%)
Query: 80 HLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHD 139
H++EL ++ I L MD L S F G L + LS + I ++ F+D
Sbjct: 42 HIAELGLPTNLTHILLFRMDRG-----VLQSHSFSGMTVLQRLMLSDSHISAIDPGTFND 96
Query: 140 LISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNN 199
L+ L+ L L++N ++ + M L++L L N + L +F L L L L N
Sbjct: 97 LVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQN 156
Query: 200 RLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFAN 259
+LSF+ LF+ L L+LS N ++ L L++L L N + ++ +G AN
Sbjct: 157 QLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLAN 216
Query: 260 LQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSN 319
L +L +L L N+++ + G F L NL+ L L+ NLL L F + L +L L N
Sbjct: 217 LGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFEN 276
Query: 320 KLQYL 324
L+ L
Sbjct: 277 PLEEL 281
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 254 AGSFANLQ------SLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEP 307
GS A++ +L + L+ + L + +F+G+T L L L+++ + +D F
Sbjct: 37 GGSVAHIAELGLPTNLTHILLFRMDRGVLQSHSFSGMTVLQRLMLSDSHISAIDPGTFND 96
Query: 308 MLHLKKLQLDSNKLQYL 324
++ LK L+L NK+ +L
Sbjct: 97 LVKLKTLRLTRNKISHL 113
>sp|P40197|GPV_HUMAN Platelet glycoprotein V OS=Homo sapiens GN=GP5 PE=1 SV=1
Length = 560
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 171/376 (45%), Gaps = 50/376 (13%)
Query: 55 NQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFK 114
+ +S ++ F+ L KL L+L +N ++ LPG L + L + L N ++ + F+
Sbjct: 84 SHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQNMFQ 143
Query: 115 GAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQS 174
+ L + L+ N ++ LPA++F +L +L+ LDLS N LT + G L+RL L S
Sbjct: 144 KLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHS 203
Query: 175 NR------------------------INQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFN 210
NR I + PG FD L L L+L N L+F+ LF
Sbjct: 204 NRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFL 263
Query: 211 YFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPA---------------- 254
+ +LT L L EN ++ L G F ++ L+EL L + + T+PA
Sbjct: 264 HSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTL 323
Query: 255 ---------GSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAF 305
G+F L L+ L L+SN + L G GL L + L N LR L F
Sbjct: 324 SPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALF 383
Query: 306 EPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKV 365
+ L+ +QLD N+L+ L D LP L + L N W CDC + WLR + V
Sbjct: 384 RNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHNSWRCDCGLGPFLGWLRQHLGLV 443
Query: 366 -WDSKPTCRGPGNLGG 380
+ P C GPG G
Sbjct: 444 GGEEPPRCAGPGAHAG 459
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 129/287 (44%), Gaps = 24/287 (8%)
Query: 58 STLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAI 117
L +F+G+ L L + +H+S + F I L T+ LS+N I LP +
Sbjct: 63 GVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMV 122
Query: 118 RLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRI 177
L + L +NA+ + N+F L++L+EL L+QN L + F+ + +LK L L N +
Sbjct: 123 LLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNL 182
Query: 178 NQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLT 237
LP G+ L+ L L +NRL + GL N L
Sbjct: 183 THLPKGLLGAQAKLERLLLHSNRLVSLDSGLLN------------------------SLG 218
Query: 238 SLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLL 297
+L EL +N+I +I G+F L +L L L N++ L + F NLT L L N L
Sbjct: 219 ALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPL 278
Query: 298 RYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNP 344
L F M L++L L+ +L+ L + L L L + +P
Sbjct: 279 AELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSP 325
>sp|Q7Z2Q7|LRR70_HUMAN Leucine-rich repeat-containing protein 70 OS=Homo sapiens GN=LRRC70
PE=2 SV=1
Length = 622
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 185/365 (50%), Gaps = 6/365 (1%)
Query: 27 LSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPG 86
++C + +P + P + L N +S +++ TGL+ L L L +++ +
Sbjct: 44 INCRNLGLSSIPKN--FPESTVFLYLTGNNISYINESELTGLHSLVALYLDNSNILYVYP 101
Query: 87 KLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEEL 146
K F+ +L + L+ N IK L FKG + L + L YN + +P VF+DL+S++ L
Sbjct: 102 KAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYL 161
Query: 147 DLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRP 206
+L +N LT + GTF GM +L+ L L +N I ++ F L+ L L L +N L+ +
Sbjct: 162 NLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPS 221
Query: 207 GLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKL 266
F K L L LS N I ++ F L +L+ L L + I + F+ + +L+ L
Sbjct: 222 NAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHL 281
Query: 267 FLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPM-LHLKKLQLDSNKLQYLA 325
L N+++ L++ TF+ L NL L L+ N + +D FE M LK L L N L L
Sbjct: 282 ILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLTALH 341
Query: 326 TDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVED 385
L L +LI L+ NPW C+C +L + WL ++ + C+ P ++ G+++
Sbjct: 342 PRVLKPLSSLIHLQANSNPWECNCKLLGLRDWLASSAITL---NIYCQNPPSMRGRALRY 398
Query: 386 MSFDD 390
++ +
Sbjct: 399 INITN 403
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 140/271 (51%), Gaps = 3/271 (1%)
Query: 73 ELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESL 132
++ R LS +P ST+ L L+ N I + + G L + L + I +
Sbjct: 43 QINCRNLGLSSIPKNFPESTVFLY---LTGNNISYINESELTGLHSLVALYLDNSNILYV 99
Query: 133 PANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLD 192
F L L L L+ N + + G F G+ +L+ L LQ N+++ +P G+F+DL +
Sbjct: 100 YPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQ 159
Query: 193 FLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETI 252
+L+L+ NRL+ + G F L L+LS N I ++ F L +L L+LG N + +
Sbjct: 160 YLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKV 219
Query: 253 PAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312
P+ +F L+SL +L L N I+ + F GL NL L L N+ +R + F + +LK
Sbjct: 220 PSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLK 279
Query: 313 KLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
L L N L+ L +D+ SLL NLI LKL +N
Sbjct: 280 HLILSHNDLENLNSDTFSLLKNLIYLKLDRN 310
>sp|O43300|LRRT2_HUMAN Leucine-rich repeat transmembrane neuronal protein 2 OS=Homo
sapiens GN=LRRTM2 PE=2 SV=3
Length = 516
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L LR NH++EL F S L+ + L N I T+ F+G +L + LS N I LP
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
F LI+L+ LDLS N L+S+ F G+ L+ L L+SN + +P +F D + L+F
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIP 253
L L NRL SL + F+ L L+ELHL N + I
Sbjct: 186 LDLSTNRLR------------------------SLARNGFAGLIKLRELHLEHNQLTKIN 221
Query: 254 AGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKK 313
F L SL LFL N I L G L L L N ++ +D FE M +LK
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 314 LQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTCR 373
L +D+NKL L + L+ L +L T+ L+ N W C I +A WL + + + W+ C
Sbjct: 282 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGR-WEHSILCH 340
Query: 374 GPGNLGGKSVED 385
P + G+ + D
Sbjct: 341 SPDHTQGEDILD 352
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 128/246 (52%), Gaps = 1/246 (0%)
Query: 27 LSCWKQDMEELPFDQIIPV-DIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELP 85
LS + EL DQ + + L NQ+ST+ +DAF GLYKL EL L N + LP
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 86 GKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEE 145
F INL +DLS N + +L F G +L + L N++ ++P +F D SLE
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 146 LDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIR 205
LDLS N L S+ F+G+ L+ L L+ N++ ++ F L L L L+ N++S +
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 206 PGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEK 265
G+ + L L+L+ N I +++ F + +LK L + N + ++ + +L+SL
Sbjct: 246 CGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTT 305
Query: 266 LFLYSN 271
+ L N
Sbjct: 306 VGLSGN 311
>sp|A4IIW9|LIGO1_XENTR Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Xenopus tropicalis
GN=lingo1 PE=2 SV=1
Length = 606
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 181/384 (47%), Gaps = 8/384 (2%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C P+ ++ C ++ ++P + IP D R++DL N++ L++D F+ L E
Sbjct: 28 CPQRCDCSPQDRSVLCHRKRYLDVP--EGIPTDTRLLDLSKNRIKALNQDEFSAFPYLEE 85
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L+L +N +S + F NL ++ L N +K +P F G LT + +S N I L
Sbjct: 86 LELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKLIPLGVFTGLSNLTQLDISENKIVILL 145
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
++F DL +L+ L++ N L I + F G+ SL+ L L+ + +P L L
Sbjct: 146 DDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSLEELTLEKCNLTSVPTEALSHLHGLIT 205
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSE-NWISSLNGDEFSQLTSLKELHLGQNYIETI 252
L LR ++ IR F L LE++ ++ ++ + L +L L + + + +I
Sbjct: 206 LKLRYLNINVIRDYSFKRLYRLKNLEIAHWPYLDTMTSNGLYGL-NLTSLSITHSNLSSI 264
Query: 253 PAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312
P + +L L L L N I + L L L L ++ AF + HLK
Sbjct: 265 PYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLVGGQLSVVEPYAFRGLNHLK 324
Query: 313 KLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTC 372
L + SN L L S + NL TL L KNP CDC +L++ R R R +P+C
Sbjct: 325 VLNVSSNYLSTLEESSFHSVGNLETLILDKNPLACDCRLLWIFR--RRWRLNFSRQQPSC 382
Query: 373 RGPGNLGGKSVEDMSFDDLCEGQW 396
P + GK +D F D+ + +
Sbjct: 383 SSPEYVQGKEFKD--FPDVLQPNY 404
>sp|D4A7P2|LRRT2_RAT Leucine-rich repeat transmembrane neuronal protein 2 OS=Rattus
norvegicus GN=Lrrtm2 PE=1 SV=1
Length = 515
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L LR NH++ L F S L+ + L N I T+ F+G +L + LS N I LP
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
F LI+L+ LDLS N L+S+ F G+ L+ L L+SN + +P +F D + L+F
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIP 253
L L NRL SL + F+ L L+ELHL N + I
Sbjct: 186 LDLSTNRLR------------------------SLARNGFAGLIKLRELHLEHNQLTKIN 221
Query: 254 AGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKK 313
F L SL LFL N I L G + L L L N ++ +D FE M +LK
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 314 LQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTCR 373
L +D+NKL L + LS L +L T+ L+ N W C + +A WL + + + W+ C
Sbjct: 282 LLMDNNKLNSLDSKILSSLRSLTTVGLSGNLWECSPRVCALASWLGSFQGR-WEHSILCH 340
Query: 374 GPGNLGGKSVED 385
P + G+ + D
Sbjct: 341 SPDHTQGEDILD 352
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 121/222 (54%)
Query: 50 IDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLP 109
+ L NQ+ST+ +DAF GLYKL EL L N + LP F INL +DLS N + +L
Sbjct: 90 LHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLH 149
Query: 110 STFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKR 169
F G +L + L N++ ++P +F D SLE LDLS N L S+ F+G+ L+
Sbjct: 150 PELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRE 209
Query: 170 LKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLN 229
L L+ N++ ++ F L L L L+ N++S + G+ + L L+L+ N I +++
Sbjct: 210 LHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTGNEIKAID 269
Query: 230 GDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSN 271
F + +LK L + N + ++ + ++L+SL + L N
Sbjct: 270 LTVFETMPNLKILLMDNNKLNSLDSKILSSLRSLTTVGLSGN 311
>sp|Q8BGA3|LRRT2_MOUSE Leucine-rich repeat transmembrane neuronal protein 2 OS=Mus
musculus GN=Lrrtm2 PE=2 SV=1
Length = 515
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L LR NH++ L F S L+ + L N I T+ F+G +L + LS N I LP
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
F LI+L+ LDLS N L+S+ F G+ L+ L L+SN + +P +F D + L+F
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIP 253
L L NRL SL + F+ L L+ELHL N + I
Sbjct: 186 LDLSTNRLR------------------------SLARNGFAGLIKLRELHLEHNQLTKIN 221
Query: 254 AGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKK 313
F L SL LFL N I L G + L L L N ++ +D FE M +LK
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 314 LQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTCR 373
L +D+NKL L + L+ L +L T+ L+ N W C + +A WL + + + W+ C
Sbjct: 282 LLMDNNKLNSLDSKILNSLKSLTTVGLSGNLWECSPRVCALASWLGSFQGR-WEHSILCH 340
Query: 374 GPGNLGGKSVED 385
P + G+ + D
Sbjct: 341 SPDHTQGEDILD 352
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 120/222 (54%)
Query: 50 IDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLP 109
+ L NQ+ST+ +DAF GLYKL EL L N + LP F INL +DLS N + +L
Sbjct: 90 LHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLH 149
Query: 110 STFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKR 169
F G +L + L N++ ++P +F D SLE LDLS N L S+ F+G+ L+
Sbjct: 150 PELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRE 209
Query: 170 LKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLN 229
L L+ N++ ++ F L L L L+ N++S + G+ + L L+L+ N I +++
Sbjct: 210 LHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAID 269
Query: 230 GDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSN 271
F + +LK L + N + ++ + +L+SL + L N
Sbjct: 270 LTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVGLSGN 311
>sp|P35859|ALS_RAT Insulin-like growth factor-binding protein complex acid labile
subunit OS=Rattus norvegicus GN=Igfals PE=1 SV=1
Length = 603
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 172/396 (43%), Gaps = 60/396 (15%)
Query: 52 LGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPST 111
L N+L+ L F GL +L EL L +N L + +F+ L + L +NLI +
Sbjct: 201 LAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPG 260
Query: 112 FFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLK 171
F G L + LS+N + L + F L+ L L L+ N + S++ TF ++ L+ L+
Sbjct: 261 AFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQ 320
Query: 172 LQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGD 231
L NRI QL F+ L L+ L+L +N+++ +R G F+ ++ + LS N + SL
Sbjct: 321 LGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPER 380
Query: 232 EFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALF 291
F L L LHL + + + +FA L L +LFL N+I + + AGL+ L L
Sbjct: 381 VFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELD 440
Query: 292 LNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLL------------------- 332
L N L +L + F+ + HL+ L L N+L L+ + L L
Sbjct: 441 LTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEG 500
Query: 333 ------------------------PNLITLKLAKNPWHCDCAILYMARWLRANRRKVW-- 366
P L L L NPW C C + + + N V
Sbjct: 501 LFSSLGRVRYLSLRNNSLQTFSPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRF 560
Query: 367 --------DSKP-------TCRGPGNLGGKSVEDMS 387
D +P TC GP N+ G + D+S
Sbjct: 561 VQTVCEGDDCQPVYTYNNITCAGPANVSGLDLRDVS 596
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 164/382 (42%), Gaps = 54/382 (14%)
Query: 14 CEGPCRCRPEIHT----LSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFT--- 66
C C C + +T + C +++ LP D IPV R + L N LS++ AF
Sbjct: 41 CPVACTCSHDDYTDELSVFCSSKNLTHLPDD--IPVSTRALWLDGNNLSSIPSAAFQNLS 98
Query: 67 ---------------------GLYKLTELKLRKNHLSELPGKLFIST------------- 92
GL L L L +N L L LF T
Sbjct: 99 SLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLL 158
Query: 93 -----------INLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLI 141
+L ++L N + LP T F+G L + L+ N + L +F L
Sbjct: 159 GRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLG 218
Query: 142 SLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRL 201
L ELDLS+N L S++ F + L++L L N I + PG F +K L +L L +NR+
Sbjct: 219 ELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRV 278
Query: 202 SFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQ 261
+ + F L L L+ N I+SL F L L+EL LG N I + +F L
Sbjct: 279 AGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLG 338
Query: 262 SLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKL 321
LE L L N I E+ G F+GL N+ + L+ N LR L + F+ + L L L+ + L
Sbjct: 339 QLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCL 398
Query: 322 QYLATDSLSLLPNLITLKLAKN 343
++ + + L L L L N
Sbjct: 399 GHVRLHTFAGLSGLRRLFLRDN 420
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 143/294 (48%)
Query: 50 IDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLP 109
++LG N L L F GL L EL L N L+ L LF L +DLS+N ++++
Sbjct: 175 LNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVK 234
Query: 110 STFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKR 169
+ F RL + L N I ++ F + +L LDLS N + + TF G+ L
Sbjct: 235 ANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHV 294
Query: 170 LKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLN 229
L+L N I L P F DL +L+ L L +NR+ + F L L L++N I+ +
Sbjct: 295 LRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVR 354
Query: 230 GDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTA 289
FS L ++ ++L N + ++P F L L L L + + + TFAGL+ L
Sbjct: 355 VGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRR 414
Query: 290 LFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
LFL +N + ++ ++ + L +L L +N+L +L L +L L L+ N
Sbjct: 415 LFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYN 468
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 137/284 (48%)
Query: 60 LSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRL 119
L + F GL L +L L N L LP +F NL + L+ N + L F G L
Sbjct: 161 LEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGEL 220
Query: 120 TVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQ 179
+ LS NA+ S+ ANVF L L++L L +N++T++ G F GM +L+ L L NR+
Sbjct: 221 RELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAG 280
Query: 180 LPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSL 239
L F L L L L +N ++ +RP F L L+L N I L F L L
Sbjct: 281 LMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQL 340
Query: 240 KELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRY 299
+ L L N I + G+F+ L ++ + L N ++ L F GL L +L L ++ L +
Sbjct: 341 EVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGH 400
Query: 300 LDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
+ F + L++L L N + + SL+ L L+ L L N
Sbjct: 401 VRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTN 444
>sp|Q80TR4|SLIT1_MOUSE Slit homolog 1 protein OS=Mus musculus GN=Slit1 PE=1 SV=2
Length = 1531
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 174/395 (44%), Gaps = 62/395 (15%)
Query: 47 IRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIK 106
+RV+ L NQ+ + + AF + +L L+L +N L LP LF + LS +DLS+N ++
Sbjct: 87 LRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFLQ 146
Query: 107 TLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYS 166
+P F+GA L +QL N I + F L LE L L+ N +T+I +F+ M
Sbjct: 147 AVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPK 206
Query: 167 LKRLKLQSNR-------------INQLPP-GIFDDLKYLDFLSLRNNRLSFIRPGLF--- 209
L+ +L SN + Q P G+F SLR ++ ++ G F
Sbjct: 207 LRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCS--GPASLRGLNVAEVQKGEFSCS 264
Query: 210 -----------------------------------------NYFKHLTFLELSENWISSL 228
N + +T + L N I S+
Sbjct: 265 GQGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSI 324
Query: 229 NGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLT 288
FS L+ + L N I I +F L+SL L LY N I +L G F GL L
Sbjct: 325 PPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQ 384
Query: 289 ALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCD 348
L LN N + + AF+ + +L L L NK+Q LA + + L + TL LA+NP+ CD
Sbjct: 385 LLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICD 444
Query: 349 CAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSV 383
C + ++A +LR N + ++ C P L K +
Sbjct: 445 CNLKWLADFLRTNPIETTGAR--CASPRRLANKRI 477
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 194/451 (43%), Gaps = 83/451 (18%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C I + C + + +P + +P + I L +N + ++ AF+ KL
Sbjct: 282 CPAMCSCSSGI--VDCRGKGLTAIPAN--LPETMTEIRLELNGIKSIPPGAFSPYRKLRR 337
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
+ L N ++E+ F +L+++ L N I LP F G L ++ L+ N I +
Sbjct: 338 IDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIR 397
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFD-DLKYL- 191
+ F DL +L L L N + S+ GTF+ + +++ L L N P I D +LK+L
Sbjct: 398 PDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN------PFICDCNLKWLA 451
Query: 192 DFL----------------SLRNNRLSFIR--------------PGLFNYF--------- 212
DFL L N R+ I+ PG +Y
Sbjct: 452 DFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDV 511
Query: 213 ----------------------------KHLTFLELSENWISSLNGDE-FSQLTSLKELH 243
+ T L L+ N IS L F +L+ LK+++
Sbjct: 512 ACPHKCRCEASVVECSSLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKIN 571
Query: 244 LGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTK 303
L N + I G+F S+ +L L +N ++ + +G F GL L L L NN + +
Sbjct: 572 LSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHND 631
Query: 304 AFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRR 363
+F + +++ L L N + ++ + L L TL L NP++C+C + ++ WLR +R
Sbjct: 632 SFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLR--KR 689
Query: 364 KVWDSKPTCRGPGNLGGKSVEDMSFDDL-CE 393
K+ P C+ P L ++D++F D CE
Sbjct: 690 KIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 54/277 (19%)
Query: 120 TVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQ 179
T V ++++P N+ + E L+L+ N +T I F+G+ L+ L+L N+I
Sbjct: 43 TTVDCHGTGLQAIPKNIPRNT---ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGA 99
Query: 180 LPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSL 239
+ G FDD+K L+ L L N+L + LF + L+ L+LSEN++ ++ F T L
Sbjct: 100 VERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDL 159
Query: 240 KELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRY 299
K L L +N I I G+F L+ LE L L +NNI + +F
Sbjct: 160 KNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN----------------- 202
Query: 300 LDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLR 359
H+ KL+ T +L N CDC + ++++WLR
Sbjct: 203 ----------HMPKLR---------------------TFRLHSNHLFCDCHLAWLSQWLR 231
Query: 360 ANRRKVWDSKPTCRGPGNLGGKSVEDMSFDDL-CEGQ 395
+R C GP +L G +V ++ + C GQ
Sbjct: 232 --QRPTIGLFTQCSGPASLRGLNVAEVQKGEFSCSGQ 266
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 169/403 (41%), Gaps = 52/403 (12%)
Query: 17 PCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYK----LT 72
P +CR E + C + ++P + IP + L N++S L TGL+K L
Sbjct: 514 PHKCRCEASVVECSSLKLSKIP--ERIPQSTTELRLNNNEISILEA---TGLFKKLSHLK 568
Query: 73 ELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESL 132
++ L N +SE+ F ++S + L+ N ++++ S F+G L + L N I +
Sbjct: 569 KINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCI 628
Query: 133 PANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRIN-------------- 178
+ F L ++ L L N +T+I G F + +L L L +N N
Sbjct: 629 HNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRK 688
Query: 179 -----------------QLPPGIFDDLKYLDFLSLRNNRL--SFIRPGLFNYFKHL-TFL 218
Q+P D+ + DF RP L T +
Sbjct: 689 RKIVTGNPRCQNPDFLRQIP---LQDVAFPDFRCEEGQEEVGCLPRPQCPQECACLDTVV 745
Query: 219 ELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHA 278
S + +L +T EL+L N +P G + + L+ + L +N I L
Sbjct: 746 RCSNKHLQALPKGIPKNVT---ELYLDGNQFTLVP-GQLSTFKYLQLVDLSNNKISSLSN 801
Query: 279 GTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITL 338
+F ++ LT L L+ N L+ + AF+ + L+ L L N + L + + +L L
Sbjct: 802 SSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHL 861
Query: 339 KLAKNPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGK 381
+ NP +CDC + +++ W++ ++ ++ C GP + GK
Sbjct: 862 AIGANPLYCDCRLRWLSSWVKTGYKEPGIAR--CAGPPEMEGK 902
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 118/308 (38%), Gaps = 60/308 (19%)
Query: 94 NLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVL 153
N ++L+ N I + F G +L V+QL N I ++ F D+ LE L L++N L
Sbjct: 62 NTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQL 121
Query: 154 TSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFK 213
+ F +L RL L N + +P F L L L NR+S I G F +
Sbjct: 122 QVLPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALR 181
Query: 214 HLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYI--------------ETIPAGSFAN 259
L L L+ N I+++ F+ + L+ L N++ + G F
Sbjct: 182 GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT- 240
Query: 260 LQSLEKLFLYSNNIQELHAGTFA------------------------------------G 283
Q L N+ E+ G F+ G
Sbjct: 241 -QCSGPASLRGLNVAEVQKGEFSCSGQGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKG 299
Query: 284 LT--------NLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNL 335
LT +T + L N ++ + AF P L+++ L +N++ +A D+ L +L
Sbjct: 300 LTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359
Query: 336 ITLKLAKN 343
+L L N
Sbjct: 360 NSLVLYGN 367
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 174/395 (44%), Gaps = 56/395 (14%)
Query: 46 DIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLI 105
++RV+ L NQ+S + + AF L +L L+L KN L LP LF ST L+ +DLS+N I
Sbjct: 86 NLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 106 KTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMY 165
+ +P F+G + +QL N I + F L LE L L+ N ++ I +F+ M
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 166 SLKRLKLQSNRI------------------------------------------------ 177
++ L+L SN +
Sbjct: 206 KIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYVCPG 265
Query: 178 --NQLPPGIFDDLKYLDFLSLRNNRLSFIRPGL----FNYFKHLTFLELSENWISSLNGD 231
++ P + L S NN + GL N + + + L +N I S+
Sbjct: 266 PHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAG 325
Query: 232 EFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALF 291
F+Q LK + + +N I I +F L+SL L LY N I E+ G F GL +L L
Sbjct: 326 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLL 385
Query: 292 LNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAI 351
LN N + L F+ + +L L L NKLQ ++ L ++ TL LA+NP+ CDC +
Sbjct: 386 LNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHL 445
Query: 352 LYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDM 386
++A +L+ N + S C P L K + +
Sbjct: 446 KWLADYLQDN--PIETSGARCSSPRRLANKRISQI 478
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 202/455 (44%), Gaps = 77/455 (16%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C I + C + + E+P + +P I I L N + ++ AFT KL
Sbjct: 280 CPSACSCSNNI--VDCRGKGLTEIPAN--LPEGIVEIRLEQNSIKSIPAGAFTQYKKLKR 335
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
+ + KN +S++ F +L+++ L N I +P F G + L ++ L+ N I L
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLR 395
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFD-DLKYL- 191
N F DL +L L L N L +I G F + S++ L L N P + D LK+L
Sbjct: 396 VNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQN------PFVCDCHLKWLA 449
Query: 192 DFLS----------------LRNNRLSFIRPGLF---------NYF-------------- 212
D+L L N R+S I+ F N F
Sbjct: 450 DYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKC 509
Query: 213 ----------------------KHLTFLELSENWISSLNGDE-FSQLTSLKELHLGQNYI 249
++ T L L++N IS L F +L +L++++L N I
Sbjct: 510 RCEGTIVDCSNQKLARIPSHLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRI 569
Query: 250 ETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPML 309
+ + G+F +++L L N ++ +H F GL++L L L +NL+ + F +
Sbjct: 570 KEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLS 629
Query: 310 HLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSK 369
++ L L N++ + + + L +L T+ L NP++C+C + ++ RWLR +R++
Sbjct: 630 SVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLR--KRRIVSGN 687
Query: 370 PTCRGPGNLGGKSVEDMSFDDL-CEGQWASMVKLT 403
P C+ P L ++D++ D C+G S +L+
Sbjct: 688 PRCQKPFFLKEIPIQDVAIQDFTCDGNEESSCQLS 722
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 53/345 (15%)
Query: 72 TELKLRKNHLSELPGK-LFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIE 130
T+L+L N +S L +F NL ++LS N IK + F GA + + L+ N +E
Sbjct: 535 TDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLE 594
Query: 131 SLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKY 190
++ +F L SL+ L L N+++ + TF+G+ S++ L L NRI + PG F L
Sbjct: 595 TMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 654
Query: 191 LDFLSL------------------RNNRLSFIRPGLFNYF--KHLTFLELS-ENWISSLN 229
L ++L R R+ P F K + +++ +++ N
Sbjct: 655 LSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Query: 230 GDEFSQLT------------------------------SLKELHLGQNYIETIPAGSFAN 259
+ QL+ + EL+L N++ +P +
Sbjct: 715 EESSCQLSPRCPEQCTCVETVVRCSNRGLHALPKGMPKDVTELYLEGNHLTAVPK-ELSA 773
Query: 260 LQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSN 319
+ L + L +N+I L TF+ +++L+ L L+ N LR + AF + L+ L L N
Sbjct: 774 FRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGN 833
Query: 320 KLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRK 364
+ + S + L +L L L NP HCDC++ +++ W++A ++
Sbjct: 834 DISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKE 878
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 116/262 (44%), Gaps = 51/262 (19%)
Query: 144 EELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSF 203
E LDL +N +T I F+G+ +L+ L L+ N+++ + G F DLK L+ L L N+L
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQV 123
Query: 204 IRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSL 263
+ LF LT L+LSEN I + F +T +K L L N+I I G+F L+ L
Sbjct: 124 LPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDL 183
Query: 264 EKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQY 323
E L L NNN+ R L T +F M ++ L+L SN L
Sbjct: 184 EILTLN-----------------------NNNISRILVT-SFNHMPKIRTLRLHSNHL-- 217
Query: 324 LATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSV 383
+CDC + +++ WLR +R+ C P +L G SV
Sbjct: 218 ----------------------YCDCHLAWLSDWLR--QRRTIGQFTLCMAPVHLRGFSV 253
Query: 384 EDMSFDD-LCEGQWASMVKLTA 404
D+ + +C G + A
Sbjct: 254 ADVQKKEYVCPGPHSEAPACNA 275
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 143/360 (39%), Gaps = 62/360 (17%)
Query: 17 PCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKL 76
P +C ++ C + +P + IP + +DL N ++ ++K F GL L L L
Sbjct: 35 PTKCTCSAASVDCHGLGLRAVP--RGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHL 92
Query: 77 RKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANV 136
N +S + F L + L++N ++ LP F+ +LT
Sbjct: 93 EDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLT---------------- 136
Query: 137 FHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSL 196
LDLS+N + I F G+ +K L+L +N I+ + G F L+ L+ L+L
Sbjct: 137 --------RLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTL 188
Query: 197 RNNRLSFIRPGLFNYFKHLTFLELSEN---------WISS--LNGDEFSQLT-SLKELHL 244
NN +S I FN+ + L L N W+S Q T + +HL
Sbjct: 189 NNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHL 248
Query: 245 ---------GQNYIETIP----AGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTA-- 289
+ Y+ P AN S SNNI + GLT + A
Sbjct: 249 RGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRG---KGLTEIPANL 305
Query: 290 ------LFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
+ L N ++ + AF LK++ + N++ +A D+ L +L +L L N
Sbjct: 306 PEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGN 365
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 71 LTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIE 130
+TEL L NHL+ +P +L + L+ +DLS N I L + F L+ + LSYN +
Sbjct: 754 VTELYLEGNHLTAVPKELS-AFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 131 SLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSN 175
+P + F+ L SL L L N ++S+ G+F+ + SL L L +N
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C + + LP + +P D+ + L N L+ + K+ + +LT
Sbjct: 725 CPEQCTCVETV--VRCSNRGLHALP--KGMPKDVTELYLEGNHLTAVPKE-LSAFRQLTL 779
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
+ L N +S L F + +LST+ LS N ++ +P F G L V+ L N I S+P
Sbjct: 780 IDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVP 839
Query: 134 ANVFHDLISLEELDLSQNVL 153
F+DL SL L L N L
Sbjct: 840 EGSFNDLTSLSHLALGTNPL 859
>sp|O88280|SLIT3_RAT Slit homolog 3 protein OS=Rattus norvegicus GN=Slit3 PE=2 SV=1
Length = 1523
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 174/395 (44%), Gaps = 56/395 (14%)
Query: 46 DIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLI 105
++RV+ L NQ+S + + AF L +L L+L KN L LP LF ST L+ +DLS+N I
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 106 KTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMY 165
+ +P F+G + +QL N I + F L LE L L+ N ++ I +F+ M
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 166 SLKRLKLQSNRI------------------------------------------------ 177
++ L+L SN +
Sbjct: 206 KIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYVCPG 265
Query: 178 --NQLPPGIFDDLKYLDFLSLRNNRLSFIRPGL----FNYFKHLTFLELSENWISSLNGD 231
++ P + L S NN + GL N + + + L +N I S+
Sbjct: 266 PHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAG 325
Query: 232 EFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALF 291
F Q LK + + +N I I +F L+SL L LY N I E+ G F GL +L L
Sbjct: 326 AFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLL 385
Query: 292 LNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAI 351
LN N + L F+ + +L L L NKLQ ++ + L ++ TL LA+NP+ CDC +
Sbjct: 386 LNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHL 445
Query: 352 LYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDM 386
++A +L+ N + S C P L K + +
Sbjct: 446 KWLADYLQDN--PIETSGARCSSPRRLANKRISQI 478
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 203/455 (44%), Gaps = 77/455 (16%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C I + C + + E+P + +P I I L N + ++ AF KL
Sbjct: 280 CPSACSCSNNI--VDCRGKGLTEIPAN--LPEGIVEIRLEQNSIKSIPAGAFIQYKKLKR 335
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
+ + KN +S++ F +L+++ L N I +P F G + L ++ L+ N I L
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLR 395
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFD-DLKYL- 191
N F DL +L L L N L +I G F+ + S++ L L N P + D LK+L
Sbjct: 396 VNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN------PFVCDCHLKWLA 449
Query: 192 DFLS----------------LRNNRLSFIRPGLF---------NYF-------------- 212
D+L L N R+S I+ F N F
Sbjct: 450 DYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKC 509
Query: 213 ----------------------KHLTFLELSENWISSLNGDE-FSQLTSLKELHLGQNYI 249
++ T L L++N I+ L F +L +L++++L N I
Sbjct: 510 RCEGTIVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRI 569
Query: 250 ETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPML 309
+ + G+F +++L L N ++ +H F GL+ L L L +NL+ ++ F +
Sbjct: 570 KEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLS 629
Query: 310 HLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSK 369
++ L L N++ ++ + + L +L T+ L NP++C+C + ++ RWLR +R++
Sbjct: 630 SVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLR--KRRIVSGN 687
Query: 370 PTCRGPGNLGGKSVEDMSFDDL-CEGQWASMVKLT 403
P C+ P L ++D++ D CEG + +L+
Sbjct: 688 PRCQKPFFLKEIPIQDVAIQDFTCEGNEENSCQLS 722
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 53/345 (15%)
Query: 72 TELKLRKNHLSELPGK-LFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIE 130
T+L+L N ++ L +F NL ++LS N IK + F GA + + L+ N +E
Sbjct: 535 TDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLE 594
Query: 131 SLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKY 190
++ +F L L+ L L N+++ + TF+G+ S++ L L NRI + PG F L
Sbjct: 595 TMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVS 654
Query: 191 LDFLSL------------------RNNRLSFIRPGLFNYF--KHLTFLELS-ENWISSLN 229
L ++L R R+ P F K + +++ +++ N
Sbjct: 655 LSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGN 714
Query: 230 GDEFSQLT------------------------------SLKELHLGQNYIETIPAGSFAN 259
+ QL+ + EL+L N++ +P +
Sbjct: 715 EENSCQLSPRCPEQCTCVETVVRCSNRGLHTLPKGMPKDVTELYLEGNHLTAVPK-ELST 773
Query: 260 LQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSN 319
+ L + L +N+I L TF+ +++L+ L L+ N LR + AF + L+ L L N
Sbjct: 774 FRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGN 833
Query: 320 KLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRK 364
+ + S + L +L L L NP HCDC++ +++ W++A ++
Sbjct: 834 DISSVPEGSFNDLTSLSHLALGINPLHCDCSLRWLSEWIKAGYKE 878
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 6/226 (2%)
Query: 180 LPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSL 239
+P GI + + LD L N ++ I F K+L L L +N +S + F L L
Sbjct: 55 VPRGIPRNAERLD---LDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQL 111
Query: 240 KELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRY 299
+ L L +N ++ +P F + L +L L N IQ + F G+T + L L+NN +
Sbjct: 112 ERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISC 171
Query: 300 LDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLR 359
++ AF + L+ L L++N + + S + +P + TL+L N +CDC + +++ WLR
Sbjct: 172 IEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLR 231
Query: 360 ANRRKVWDSKPTCRGPGNLGGKSVEDMSFDD-LCEGQWASMVKLTA 404
+R+ C P +L G SV D+ + +C G + A
Sbjct: 232 --QRRTIGQFTLCMAPVHLRGFSVADVQKKEYVCPGPHSEAPACNA 275
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 144/360 (40%), Gaps = 62/360 (17%)
Query: 17 PCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKL 76
P +C ++ C + +P + IP + +DL N ++ ++K FTGL L L L
Sbjct: 35 PTKCTCSAASVDCHGLGLRAVP--RGIPRNAERLDLDRNNITRITKMDFTGLKNLRVLHL 92
Query: 77 RKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANV 136
N +S + F L + L++N ++ LP F+ +LT
Sbjct: 93 EDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLT---------------- 136
Query: 137 FHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSL 196
LDLS+N + I F G+ +K L+L +N I+ + G F L+ L+ L+L
Sbjct: 137 --------RLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTL 188
Query: 197 RNNRLSFIRPGLFNYFKHLTFLELSEN---------WISS--LNGDEFSQLT-SLKELHL 244
NN +S I FN+ + L L N W+S Q T + +HL
Sbjct: 189 NNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHL 248
Query: 245 ---------GQNYIETIP----AGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTA-- 289
+ Y+ P AN S SNNI + GLT + A
Sbjct: 249 RGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRG---KGLTEIPANL 305
Query: 290 ------LFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
+ L N ++ + AF LK++ + N++ +A D+ L +L +L L N
Sbjct: 306 PEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGN 365
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 49 VIDLGINQLSTLSKDAFTGLYK-LTELKLRKNHLSELPGKLFISTI-NLSTMDLSQNLIK 106
V+ L TL K G+ K +TEL L NHL+ +P +L ST L+ +DLS N I
Sbjct: 735 VVRCSNRGLHTLPK----GMPKDVTELYLEGNHLTAVPKEL--STFRQLTLIDLSNNSIS 788
Query: 107 TLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYS 166
L + F L+ + LSYN + +P + F+ L SL L L N ++S+ G+F+ + S
Sbjct: 789 MLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTS 848
Query: 167 LKRLKLQSN 175
L L L N
Sbjct: 849 LSHLALGIN 857
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C + + LP + +P D+ + L N L+ + K+ T +LT
Sbjct: 725 CPEQCTCVETV--VRCSNRGLHTLP--KGMPKDVTELYLEGNHLTAVPKELST-FRQLTL 779
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
+ L N +S L F + +LST+ LS N ++ +P F G L V+ L N I S+P
Sbjct: 780 IDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVP 839
Query: 134 ANVFHDLISLEELDLSQNVL 153
F+DL SL L L N L
Sbjct: 840 EGSFNDLTSLSHLALGINPL 859
>sp|Q9D1T0|LIGO1_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Mus musculus GN=Lingo1
PE=1 SV=1
Length = 614
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 175/374 (46%), Gaps = 6/374 (1%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C ++ +P + IP + R++DLG N++ TL++D F L E
Sbjct: 36 CPPRCECSAQDRAVLCHRKRFVAVP--EGIPTETRLLDLGKNRIKTLNQDEFASFPHLEE 93
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L+L +N +S + F + NL T+ L N +K +P F G LT + +S N I L
Sbjct: 94 LELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILL 153
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
+F DL +L+ L++ N L I + FSG+ SL++L L+ + +P L L
Sbjct: 154 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIV 213
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSE-NWISSLNGDEFSQLTSLKELHLGQNYIETI 252
L LR+ ++ IR F L LE+S ++ ++ + L +L L + + +
Sbjct: 214 LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAV 272
Query: 253 PAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312
P + +L L L L N I + L L + L L ++ AF + +L+
Sbjct: 273 PYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLR 332
Query: 313 KLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTC 372
L + N+L L + + NL TL L NP CDC +L++ R R R +PTC
Sbjct: 333 VLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFR--RRWRLNFNRQQPTC 390
Query: 373 RGPGNLGGKSVEDM 386
P + GK +D
Sbjct: 391 ATPEFVQGKEFKDF 404
>sp|Q96FE5|LIGO1_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Homo sapiens GN=LINGO1
PE=1 SV=2
Length = 620
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 177/376 (47%), Gaps = 12/376 (3%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C ++ +P + IP + R++DLG N++ TL++D F L E
Sbjct: 42 CPPRCECSAQDRAVLCHRKRFVAVP--EGIPTETRLLDLGKNRIKTLNQDEFASFPHLEE 99
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L+L +N +S + F + NL T+ L N +K +P F G LT + +S N I L
Sbjct: 100 LELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILL 159
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
+F DL +L+ L++ N L I + FSG+ SL++L L+ + +P L L
Sbjct: 160 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIV 219
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSE-NWISSLNGDEFSQLTSLKELHLGQNYIETI 252
L LR+ ++ IR F L LE+S ++ ++ + L +L L + + +
Sbjct: 220 LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAV 278
Query: 253 PAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312
P + +L L L L N I + L L + L L ++ AF + +L+
Sbjct: 279 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLR 338
Query: 313 KLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYM--ARW-LRANRRKVWDSK 369
L + N+L L + NL TL L NP CDC +L++ RW L NR+ +
Sbjct: 339 VLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQ-----Q 393
Query: 370 PTCRGPGNLGGKSVED 385
PTC P + GK +D
Sbjct: 394 PTCATPEFVQGKEFKD 409
>sp|Q9N008|LIGO1_MACFA Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Macaca fascicularis
GN=LINGO1 PE=2 SV=1
Length = 614
Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 174/373 (46%), Gaps = 6/373 (1%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C ++ +P + IP + R++DLG N++ TL++D F L E
Sbjct: 36 CPPRCECSAQDRAVLCHRKRFVAVP--EGIPTETRLLDLGKNRIKTLNQDEFASFPHLEE 93
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L+L +N +S + F + NL T+ L N +K +P F G LT + +S N I L
Sbjct: 94 LELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILL 153
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
+F DL +L+ L++ N L I + FSG+ SL++L L+ + +P L L
Sbjct: 154 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIV 213
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSE-NWISSLNGDEFSQLTSLKELHLGQNYIETI 252
L LR+ ++ IR F L LE+S ++ ++ + L +L L + + +
Sbjct: 214 LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAV 272
Query: 253 PAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312
P + +L L L L N I + L L + L L ++ AF + +L+
Sbjct: 273 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAMVEPYAFRGLNYLR 332
Query: 313 KLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTC 372
L + N+L L + NL TL L NP CDC +L++ R R R +PTC
Sbjct: 333 VLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFR--RRWRLNFNRQQPTC 390
Query: 373 RGPGNLGGKSVED 385
P + GK +D
Sbjct: 391 ATPEFVQGKEFKD 403
>sp|Q5RDJ4|LIGO1_PONAB Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Pongo abelii GN=LINGO1
PE=2 SV=1
Length = 614
Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 174/374 (46%), Gaps = 6/374 (1%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C ++ +P + IP + R++DLG N++ TL++D F L E
Sbjct: 36 CPPRCECSAQDRAVLCHRKRFVAVP--EGIPTETRLLDLGKNRIKTLNQDEFASFPHLEE 93
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L+L +N +S + F + NL T+ L N +K +P F G LT + +S N I L
Sbjct: 94 LELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILL 153
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
+F DL +L+ L++ N L I + FSG+ SL++L L+ + +P L L
Sbjct: 154 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIV 213
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSE-NWISSLNGDEFSQLTSLKELHLGQNYIETI 252
L LR+ ++ IR F L LE+S ++ ++ + L +L L + + +
Sbjct: 214 LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAV 272
Query: 253 PAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312
P + +L L L L N I + L L + L L ++ AF + +L+
Sbjct: 273 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLR 332
Query: 313 KLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTC 372
L + N+L L + NL TL L NP CDC +L++ R R R +PTC
Sbjct: 333 VLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFR--RRWRLNFNRQQPTC 390
Query: 373 RGPGNLGGKSVEDM 386
P + GK +D
Sbjct: 391 ATPEFVQGKEFKDF 404
>sp|Q50L44|LIGO1_CHICK Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Gallus gallus
GN=LINGO1 PE=2 SV=1
Length = 613
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 174/373 (46%), Gaps = 6/373 (1%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C ++ +P + IP + R +DLG N++ TL++D F L E
Sbjct: 35 CPPRCECSAQERAVLCHRKRFMVVP--EGIPTETRQLDLGKNRIKTLNQDEFANYPHLEE 92
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L+L +N +S + F + NL T+ L N +K +P F G LT + +S N I L
Sbjct: 93 LELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILL 152
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
+F DL +L+ L++ N L I + FSG+ SL++L L+ + +P L L
Sbjct: 153 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIV 212
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSE-NWISSLNGDEFSQLTSLKELHLGQNYIETI 252
L LR+ ++ IR F L LE+S ++ ++ + L +L L + + +I
Sbjct: 213 LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGL-NLTSLSITHCNLTSI 271
Query: 253 PAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312
P S +L L L L N I + L L + L L ++ AF + +L+
Sbjct: 272 PYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLR 331
Query: 313 KLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTC 372
L + N L L + + NL TL L NP CDC +L++ R R R +PTC
Sbjct: 332 ILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRLLWVFR--RRWRLNFNKQQPTC 389
Query: 373 RGPGNLGGKSVED 385
P + GK +D
Sbjct: 390 STPEFVQGKEFKD 402
>sp|Q5R6B1|LRRT1_PONAB Leucine-rich repeat transmembrane neuronal protein 1 OS=Pongo
abelii GN=LRRTM1 PE=2 SV=1
Length = 522
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 147/292 (50%), Gaps = 3/292 (1%)
Query: 103 NLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFS 162
N + L + F G ++LT + L +N I S+ + F L ++EL LS N +T + TF
Sbjct: 75 NSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFR 134
Query: 163 GMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSE 222
M +L+ + L N++ L P +F L+ L L +R N + F+ +F + L FL++
Sbjct: 135 PMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGY 194
Query: 223 NWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFA 282
N + SL + F+ L L ELHL N + + F L SL L L N + + +
Sbjct: 195 NQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKV-AIVVSSLD 253
Query: 283 GLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAK 342
+ NL + L+ N + Y++ FE + HL+ LQLDSN+L Y+ L+ +L ++ LA
Sbjct: 254 WVWNLKKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWKSLTSITLAG 313
Query: 343 NPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMSFD-DLCE 393
N W C + +A WL +N + +D C P G+ V D + LCE
Sbjct: 314 NLWDCGRNVCALASWL-SNFQGRYDGNLQCASPEYAQGEDVLDAVYAFHLCE 364
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 1/217 (0%)
Query: 55 NQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFK 114
N + ++ DAF L ++ EL L N +++LP F NL ++DLS N ++ L F
Sbjct: 99 NHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFH 158
Query: 115 GAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQS 174
G +LT + + NAI+ +P +F D SL+ LD+ N L S+ +F+G++ L L L+
Sbjct: 159 GLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 175 NRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFS 234
N + ++ F L L L LR N+++ + L ++ +L ++LS N I + F
Sbjct: 219 NDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSL-DWVWNLKKMDLSGNEIEYMEPHVFE 277
Query: 235 QLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSN 271
+ L+ L L N + I + +SL + L N
Sbjct: 278 TVPHLQSLQLDSNRLTYIEPRILNSWKSLTSITLAGN 314
>sp|A1A4H9|LRRT1_BOVIN Leucine-rich repeat transmembrane neuronal protein 1 OS=Bos taurus
GN=LRRTM1 PE=2 SV=1
Length = 521
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 147/292 (50%), Gaps = 3/292 (1%)
Query: 103 NLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFS 162
N + L + F G ++LT + L +N I S+ + F L ++EL LS N +T + TF
Sbjct: 75 NSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFR 134
Query: 163 GMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSE 222
M +L+ + L N++ L P +F L+ L L +R N + F+ +F + L FL++
Sbjct: 135 PMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGY 194
Query: 223 NWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFA 282
N + SL + F+ L L ELHL N + + F L SL L L N + + +
Sbjct: 195 NQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKV-AIVVSSLD 253
Query: 283 GLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAK 342
+ NL + L+ N + Y++ FE + HL+ LQLDSN+L Y+ L+ +L ++ LA
Sbjct: 254 WVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYVEPRILNSWKSLTSITLAG 313
Query: 343 NPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMSFD-DLCE 393
N W C + +A WL +N + +D C P G+ V D + LCE
Sbjct: 314 NLWDCGRNVCALASWL-SNFQGRYDGNLQCASPEYAQGEDVLDAVYAFHLCE 364
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 1/217 (0%)
Query: 55 NQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFK 114
N + ++ DAF L ++ EL L N +++L F NL ++DLS N ++ L F
Sbjct: 99 NHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFH 158
Query: 115 GAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQS 174
G +LT + + NAI+ +P +F D SL+ LD+ N L S+ +F+G++ L L L+
Sbjct: 159 GLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 175 NRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFS 234
N + ++ F L L L LR N+++ + L ++ +L ++LS N I + F
Sbjct: 219 NDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSL-DWVWNLEKMDLSGNEIEYMEPHVFE 277
Query: 235 QLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSN 271
+ L+ L L N + + + +SL + L N
Sbjct: 278 TVPHLQSLQLDSNRLTYVEPRILNSWKSLTSITLAGN 314
>sp|P70389|ALS_MOUSE Insulin-like growth factor-binding protein complex acid labile
subunit OS=Mus musculus GN=Igfals PE=2 SV=1
Length = 603
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 170/396 (42%), Gaps = 60/396 (15%)
Query: 52 LGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPST 111
L N+L+ L GL +L EL L +N L + +FI L + L +NLI +
Sbjct: 201 LAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPR 260
Query: 112 FFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLK 171
F G L + LS+N + L + F L+ L L L+ N +TS++ TF ++ L+ L+
Sbjct: 261 AFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQ 320
Query: 172 LQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGD 231
L NRI QL F+ L L+ L+L +N++ ++ G F ++ + LS N + SL
Sbjct: 321 LGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEH 380
Query: 232 EFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALF 291
F L L LHL + + I +FA L L +LFL N+I + + AGL+ L L
Sbjct: 381 VFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELD 440
Query: 292 LNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLL------------------- 332
L N L +L + F+ + L+ L L +N+L L+ D L L
Sbjct: 441 LTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEG 500
Query: 333 ------------------------PNLITLKLAKNPWHCDCAILYMARWLRANRRKVW-- 366
P L L L NPW C C + + + N V
Sbjct: 501 LFSSLGRLRYLNLRNNSLQTFVPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRF 560
Query: 367 --------DSKP-------TCRGPGNLGGKSVEDMS 387
D +P TC GP N+ G + D+S
Sbjct: 561 VQTVCEGDDCQPVYTYNNITCAGPANVSGLDLRDIS 596
Score = 128 bits (321), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 159/355 (44%), Gaps = 30/355 (8%)
Query: 14 CEGPCRCRPEIHT----LSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFT--- 66
C C C + +T + C +++ +LP IPV R + L N LS++ AF
Sbjct: 41 CPVTCTCSYDDYTDELSVFCSSRNLTQLP--DGIPVSTRALWLDGNNLSSIPSAAFQNLS 98
Query: 67 ---------------------GLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLI 105
GL L L L +N L L LF T +L+++ L NL+
Sbjct: 99 SLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLL 158
Query: 106 KTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMY 165
L F+G L + L +N++ LP VF L +L EL L+ N LT +Q G+
Sbjct: 159 GRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLG 218
Query: 166 SLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWI 225
L+ L L N + + +F L L L L N ++ + P F K L +L+LS N +
Sbjct: 219 ELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRV 278
Query: 226 SSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLT 285
+ L D F L L L L N I ++ +F +L LE+L L N I++L TF GL
Sbjct: 279 AGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLG 338
Query: 286 NLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKL 340
L L LN+N + + AF + ++ + L N L+ L L L +L L
Sbjct: 339 QLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHL 393
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 139/294 (47%)
Query: 50 IDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLP 109
++LG N L L F GL L EL L N L+ L L L +DLS+N ++++
Sbjct: 175 LNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVK 234
Query: 110 STFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKR 169
+ F RL + L N I ++ F + +L LDLS N + + TF G+ L
Sbjct: 235 ANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHV 294
Query: 170 LKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLN 229
L+L N I L P F DL +L+ L L +NR+ + F L L L++N I +
Sbjct: 295 LRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVK 354
Query: 230 GDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTA 289
F L ++ ++L N + ++P F L L L L + + + TFAGL+ L
Sbjct: 355 VGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRR 414
Query: 290 LFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
LFL +N + ++ ++ + L +L L +N+L +L L L L L+ N
Sbjct: 415 LFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNN 468
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 138/294 (46%)
Query: 50 IDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLP 109
+ LG N L L + F GL L +L L N L LP +F NL + L+ N + L
Sbjct: 151 LSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQ 210
Query: 110 STFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKR 169
G L + LS NA+ S+ ANVF L L++L L +N++T++ F GM +L+
Sbjct: 211 PALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRW 270
Query: 170 LKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLN 229
L L NR+ L F L L L L +N ++ +RP F L L+L N I L
Sbjct: 271 LDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLG 330
Query: 230 GDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTA 289
F L L+ L L N I + G+F L ++ + L N ++ L F GL L +
Sbjct: 331 EKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHS 390
Query: 290 LFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
L L ++ L + F + L++L L N + + SL+ L L+ L L N
Sbjct: 391 LHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTAN 444
>sp|Q86UE6|LRRT1_HUMAN Leucine-rich repeat transmembrane neuronal protein 1 OS=Homo
sapiens GN=LRRTM1 PE=2 SV=2
Length = 522
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 3/292 (1%)
Query: 103 NLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFS 162
N + L + F G ++LT + L +N I S+ + F L ++EL LS N +T + TF
Sbjct: 75 NSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFR 134
Query: 163 GMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSE 222
M +L+ + L N++ L P +F L+ L L +R N + F+ +F + L FL++
Sbjct: 135 PMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGY 194
Query: 223 NWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFA 282
N + SL + F+ L L ELHL N + + F L SL L L N + + +
Sbjct: 195 NQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKV-AIVVSSLD 253
Query: 283 GLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAK 342
+ NL + L+ N + Y++ FE + HL+ LQLDSN+L Y+ L+ +L ++ LA
Sbjct: 254 WVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWKSLTSITLAG 313
Query: 343 NPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMSFD-DLCE 393
N W C + +A WL N + +D C P G+ V D + LCE
Sbjct: 314 NLWDCGRNVCALASWLN-NFQGRYDGNLQCASPEYAQGEDVLDAVYAFHLCE 364
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 1/217 (0%)
Query: 55 NQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFK 114
N + ++ DAF L ++ EL L N +++LP F NL ++DLS N ++ L F
Sbjct: 99 NHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFH 158
Query: 115 GAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQS 174
G +LT + + NAI+ +P +F D SL+ LD+ N L S+ +F+G++ L L L+
Sbjct: 159 GLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 175 NRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFS 234
N + ++ F L L L LR N+++ + L ++ +L ++LS N I + F
Sbjct: 219 NDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSL-DWVWNLEKMDLSGNEIEYMEPHVFE 277
Query: 235 QLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSN 271
+ L+ L L N + I + +SL + L N
Sbjct: 278 TVPHLQSLQLDSNRLTYIEPRILNSWKSLTSITLAGN 314
>sp|P35858|ALS_HUMAN Insulin-like growth factor-binding protein complex acid labile
subunit OS=Homo sapiens GN=IGFALS PE=1 SV=1
Length = 605
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 140/289 (48%)
Query: 55 NQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFK 114
NQL +L+ F L L L N LS L LF +L ++L N + LP F+
Sbjct: 132 NQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFR 191
Query: 115 GAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQS 174
G L + L+ N + L +F L L ELDLS+N L +I+ F + L++L L
Sbjct: 192 GLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDR 251
Query: 175 NRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFS 234
N I + PG F LK L +L L +NR++ + F L L LS N I+SL F
Sbjct: 252 NLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFK 311
Query: 235 QLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNN 294
L L+EL LG N I + SF L LE L L N +QE+ AG F GLTN+ + L+
Sbjct: 312 DLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSG 371
Query: 295 NLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
N LR L + F + L L L+ + L + + + L L L L N
Sbjct: 372 NCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDN 420
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 146/297 (49%)
Query: 47 IRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIK 106
+R + L N+L+ L F+GL +L EL L +N L + +F+ L + L +NLI
Sbjct: 196 LRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIA 255
Query: 107 TLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYS 166
+ F G L + LS+N + L + F L+ L L LS N + S++ TF ++
Sbjct: 256 AVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHF 315
Query: 167 LKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWIS 226
L+ L+L NRI QL F+ L L+ L+L +N+L ++ G F ++ + LS N +
Sbjct: 316 LEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLR 375
Query: 227 SLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTN 286
+L F L L LHL + + I +F L L +LFL N + + + GL
Sbjct: 376 NLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAE 435
Query: 287 LTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
L L L +N L +L + F+ + L+ L L N+L L D+L L L ++ N
Sbjct: 436 LLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHN 492
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 140/294 (47%)
Query: 50 IDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLP 109
++LG N L+ L AF GL L EL L N L+ L LF L +DLS+N ++ +
Sbjct: 175 LNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIK 234
Query: 110 STFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKR 169
+ F RL + L N I ++ F L +L LDLS N + + TF G+ L+
Sbjct: 235 ANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRV 294
Query: 170 LKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLN 229
L+L N I L P F DL +L+ L L +NR+ + F L L L N + +
Sbjct: 295 LRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVK 354
Query: 230 GDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTA 289
F LT++ ++L N + +P F L L L L + + + TF GL+ L
Sbjct: 355 AGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRR 414
Query: 290 LFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
LFL +N L ++ ++ + L +L L SN+L +L L L L L++N
Sbjct: 415 LFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRN 468
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 133/268 (49%)
Query: 76 LRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPAN 135
L N+LS +P F + +L ++L + +L G L + L N + SL
Sbjct: 81 LDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG 140
Query: 136 VFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLS 195
F +L L LS N L+ ++ G F G+ SL L L N + LP F L L L
Sbjct: 141 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELV 200
Query: 196 LRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAG 255
L NRL++++P LF+ L L+LS N + ++ + F QL L++L+L +N I + G
Sbjct: 201 LAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPG 260
Query: 256 SFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQ 315
+F L++L L L N + L TF GL L L L++N + L + F+ + L++LQ
Sbjct: 261 AFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQ 320
Query: 316 LDSNKLQYLATDSLSLLPNLITLKLAKN 343
L N+++ LA S L L L L N
Sbjct: 321 LGHNRIRQLAERSFEGLGQLEVLTLDHN 348
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 140/331 (42%), Gaps = 28/331 (8%)
Query: 45 VDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNL 104
++R +DL N L + + F L +L +L L +N ++ + F+ L +DLS N
Sbjct: 218 AELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNR 277
Query: 105 IKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQN------------- 151
+ L F G + L V++LS+NAI SL F DL LEEL L N
Sbjct: 278 VAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGL 337
Query: 152 ----VLT-------SIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNR 200
VLT ++ G F G+ ++ + L N + LP +F L L L L +
Sbjct: 338 GQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSC 397
Query: 201 LSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANL 260
L IRP F L L L +N + + L L EL L N + +P F L
Sbjct: 398 LGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGL 457
Query: 261 QSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNK 320
LE L L N + EL A L L +++N L L P+ L+ L L +N
Sbjct: 458 GKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNS 517
Query: 321 LQYLATDSLSLLPNLITLKLAKNPWHCDCAI 351
L+ P L L L NPW C C +
Sbjct: 518 LRTFTPQP----PGLERLWLEGNPWDCGCPL 544
>sp|O02833|ALS_PAPHA Insulin-like growth factor-binding protein complex acid labile
subunit OS=Papio hamadryas GN=IGFALS PE=2 SV=1
Length = 605
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 140/289 (48%)
Query: 55 NQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFK 114
NQL +L+ F L L L N LS L LF NL ++L N + LP F+
Sbjct: 132 NQLRSLAVGTFAYTPALALLGLSNNRLSRLEDGLFEGLGNLWDLNLGWNSLAVLPDAAFR 191
Query: 115 GAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQS 174
G L + L+ N + L +F L L ELDLS+N L +I+ F+ + L++L L
Sbjct: 192 GLGGLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFAQLPRLQKLYLDR 251
Query: 175 NRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFS 234
N I + PG F LK L +L L +NR++ + F L L LS N I+SL F
Sbjct: 252 NLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFE 311
Query: 235 QLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNN 294
L L+EL LG N I + SF L LE L L N +QE+ G F GLTN+ + L+
Sbjct: 312 DLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKVGAFLGLTNVAVMNLSG 371
Query: 295 NLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
N LR L + F + L L L+ + L + + + L L L L N
Sbjct: 372 NCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFAGLSGLRRLFLKDN 420
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 146/318 (45%), Gaps = 24/318 (7%)
Query: 50 IDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLP 109
++LG N L+ L AF GL L EL L N L+ L LF L +DLS+N ++ +
Sbjct: 175 LNLGWNSLAVLPDAAFRGLGGLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIK 234
Query: 110 STFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQN------------------ 151
+ F RL + L N I ++ F L +L LDLS N
Sbjct: 235 ANVFAQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRV 294
Query: 152 ------VLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIR 205
+ S++ TF ++ L+ L+L NRI QL F+ L L+ L+L +N+L ++
Sbjct: 295 LRLSHNAIASLRPRTFEDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVK 354
Query: 206 PGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEK 265
G F ++ + LS N + +L F L L LHL + + I +FA L L +
Sbjct: 355 VGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFAGLSGLRR 414
Query: 266 LFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLA 325
LFL N + + + GL L L L +N L +L + F+ + L+ L L N+L L
Sbjct: 415 LFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHQLFQGLGKLEYLLLSHNRLAELP 474
Query: 326 TDSLSLLPNLITLKLAKN 343
D+L L L ++ N
Sbjct: 475 ADALGPLQRAFWLDVSHN 492
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 154/335 (45%), Gaps = 30/335 (8%)
Query: 13 CCEGPCRCR--PEIHTLS--CWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGL 68
C C C E++ LS C +++ LP IP + + L N LS++ AF L
Sbjct: 40 ACPATCACSYDDEVNELSVFCSSRNLTRLP--DGIPGGTQALWLDSNNLSSIPPAAFRNL 97
Query: 69 YKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNA 128
L L L+ L L + + NL + L +N ++
Sbjct: 98 SSLAFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLR---------------------- 135
Query: 129 IESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDL 188
SL F +L L LS N L+ ++ G F G+ +L L L N + LP F L
Sbjct: 136 --SLAVGTFAYTPALALLGLSNNRLSRLEDGLFEGLGNLWDLNLGWNSLAVLPDAAFRGL 193
Query: 189 KYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNY 248
L L L NRL++++P LF+ L L+LS N + ++ + F+QL L++L+L +N
Sbjct: 194 GGLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFAQLPRLQKLYLDRNL 253
Query: 249 IETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPM 308
I + G+F L++L L L N + L TF GL L L L++N + L + FE +
Sbjct: 254 IAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFEDL 313
Query: 309 LHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
L++LQL N+++ LA S L L L L N
Sbjct: 314 HFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHN 348
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 144/327 (44%), Gaps = 20/327 (6%)
Query: 45 VDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNL 104
++R +DL N L + + F L +L +L L +N ++ + F+ L +DLS N
Sbjct: 218 AELRELDLSRNALRAIKANVFAQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNR 277
Query: 105 IKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGM 164
+ L F G + L V++LS+NAI SL F DL LEEL L N + + +F G+
Sbjct: 278 VAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFEDLHFLEELQLGHNRIRQLAERSFEGL 337
Query: 165 YSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENW 224
L+ L L N++ ++ G F L + ++L N L + +F L L L +
Sbjct: 338 GQLEVLTLDHNQLQEVKVGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSC 397
Query: 225 ISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGL 284
+ + F+ L+ L+ L L N + I S L L +L L SN + L F GL
Sbjct: 398 LGRIRPHTFAGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHQLFQGL 457
Query: 285 TNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLL------------ 332
L L L++N L L A P+ L + N+L+ L L+ L
Sbjct: 458 GKLEYLLLSHNRLAELPADALGPLQRAFWLDVSHNRLEALPGSLLASLGRLRYLNLRNNS 517
Query: 333 --------PNLITLKLAKNPWHCDCAI 351
P L L L NPW C C +
Sbjct: 518 LRTFTPQPPGLERLWLEGNPWDCSCPL 544
>sp|Q8K377|LRRT1_MOUSE Leucine-rich repeat transmembrane neuronal protein 1 OS=Mus
musculus GN=Lrrtm1 PE=2 SV=1
Length = 522
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 148/292 (50%), Gaps = 3/292 (1%)
Query: 103 NLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFS 162
N + L + F G ++LT + L +N I S+ + F L ++EL LS N +T + TF
Sbjct: 75 NSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFR 134
Query: 163 GMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSE 222
M +L+ + L N++ L P +F L+ L L +R N + F+ +F + L FL++
Sbjct: 135 PMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGY 194
Query: 223 NWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFA 282
N + SL + F+ L L ELHL N + + F L SL L L N + + +
Sbjct: 195 NQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKV-AIVVSSLD 253
Query: 283 GLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAK 342
+ NL + L+ N + Y++ FE + +L+ LQLDSN+L Y+ L+ +L ++ LA
Sbjct: 254 WVWNLEKMDLSGNEIEYMEPHVFETVPYLQTLQLDSNRLTYIEPRILNSWKSLTSITLAG 313
Query: 343 NPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMSFD-DLCE 393
N W C + +A WL +N + +D+ C P G+ V D + LCE
Sbjct: 314 NLWDCGRNVCALASWL-SNFQGRYDANLQCASPEYAQGEDVLDAVYAFHLCE 364
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 24/279 (8%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPV----------DIRV-----------IDL 52
C G CRC E L C ++ E P + + ++R + L
Sbjct: 39 CPGQCRC--EGRLLYCEALNLTEAPHNLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYL 96
Query: 53 GINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTF 112
N + ++ DAF L ++ EL L N ++EL F NL ++DLS N ++ L
Sbjct: 97 DHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDL 156
Query: 113 FKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKL 172
F G +LT + + NAI+ +P +F D SL+ LD+ N L S+ +F+G++ L L L
Sbjct: 157 FHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHL 216
Query: 173 QSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDE 232
+ N + ++ F L L L LR N+++ + L ++ +L ++LS N I +
Sbjct: 217 EHNDLIKVNFAHFPRLISLHSLCLRRNKVAIVVSSL-DWVWNLEKMDLSGNEIEYMEPHV 275
Query: 233 FSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSN 271
F + L+ L L N + I + +SL + L N
Sbjct: 276 FETVPYLQTLQLDSNRLTYIEPRILNSWKSLTSITLAGN 314
>sp|D4A6D8|LRRT1_RAT Leucine-rich repeat transmembrane neuronal protein 1 OS=Rattus
norvegicus GN=Lrrtm1 PE=3 SV=1
Length = 523
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 148/292 (50%), Gaps = 3/292 (1%)
Query: 103 NLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFS 162
N + L + F G ++LT + L +N I S+ + F L ++EL LS N +T + TF
Sbjct: 75 NSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFR 134
Query: 163 GMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSE 222
M +L+ + L N++ L P +F L+ L L +R N + F+ +F + L FL++
Sbjct: 135 PMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGY 194
Query: 223 NWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFA 282
N + SL + F+ L L ELHL N + + F L SL L L N + + +
Sbjct: 195 NQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRRNKV-AIVVSSLD 253
Query: 283 GLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAK 342
+ NL + L+ N + Y++ FE + +L+ LQLDSN+L Y+ L+ +L ++ LA
Sbjct: 254 WVWNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTYIEPRILNSWKSLTSITLAG 313
Query: 343 NPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMSFD-DLCE 393
N W C + +A WL +N + +D+ C P G+ V D + LCE
Sbjct: 314 NLWDCGRNVCALASWL-SNFQGRYDANLQCASPEYAQGEDVLDAVYAFHLCE 364
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 24/279 (8%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPV----------DIRV-----------IDL 52
C G CRC E L C ++ E P + + ++R + L
Sbjct: 39 CPGQCRC--EGRLLYCEALNLTEAPHNLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYL 96
Query: 53 GINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTF 112
N + ++ DAF L ++ EL L N ++EL F NL ++DLS N ++ L
Sbjct: 97 DHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDL 156
Query: 113 FKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKL 172
F G +LT + + NAI+ +P +F D SL+ LD+ N L S+ +F+G++ L L L
Sbjct: 157 FHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHL 216
Query: 173 QSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDE 232
+ N + ++ F L L+ L LR N+++ + L ++ +L ++LS N I +
Sbjct: 217 EHNDLIKVNFAHFPRLISLNSLCLRRNKVAIVVSSL-DWVWNLEKMDLSGNEIEYMEPHV 275
Query: 233 FSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSN 271
F + L+ L L N + I + +SL + L N
Sbjct: 276 FETVPYLQSLQLDSNRLTYIEPRILNSWKSLTSITLAGN 314
>sp|Q9GZU5|NYX_HUMAN Nyctalopin OS=Homo sapiens GN=NYX PE=1 SV=1
Length = 481
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 168/372 (45%), Gaps = 35/372 (9%)
Query: 26 TLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELP 85
++ C + + +P + +P + IDL N L L + AF L L L LR N+LS +
Sbjct: 45 SVRCDRAGLLRVPAE--LPCEAVSIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFIT 102
Query: 86 GKLFISTINLSTMDLSQNL-IKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLE 144
F L+ + L+ N ++ L + F RL + L+ + S+P + +L +L
Sbjct: 103 PGAFKGLPRLAELRLAHNGDLRYLHARTFAALSRLRRLDLAACRLFSVPERLLAELPALR 162
Query: 145 ELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFI 204
EL N+ + G G+ +L L+ RI + L+ L LSL+ NR+ +
Sbjct: 163 ELAAFDNLFRRVP-GALRGLANLTHAHLERGRIEAVASSSLQGLRRLRSLSLQANRVRAV 221
Query: 205 RPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLE 264
G F L L L++N ++ L D F L L+ L+LG N ++ + FA+L LE
Sbjct: 222 HAGAFGDCGVLEHLLLNDNLLAELPADAFRGLRRLRTLNLGGNALDRVARAWFADLAELE 281
Query: 265 KLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYL 324
L+L N+I + G F L+ L AL LN N L L AF+P L +
Sbjct: 282 LLYLDRNSIAFVEEGAFQNLSGLLALHLNGNRLTVLAWVAFQPGFFLGR----------- 330
Query: 325 ATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVE 384
L L +NPW CDC + ++ W+ + R V D C PG++ G +
Sbjct: 331 -------------LFLFRNPWCCDCRLEWLRDWMEGSGR-VTDVP--CASPGSVAGLDLS 374
Query: 385 DMSF----DDLC 392
++F D LC
Sbjct: 375 QVTFGRSSDGLC 386
>sp|Q6P1C6|LRIG3_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 3
OS=Mus musculus GN=Lrig3 PE=1 SV=1
Length = 1117
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 199/456 (43%), Gaps = 79/456 (17%)
Query: 7 EDSWYRCCEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFT 66
+D R C C C ++ L C ++ + LP +P + +DL N+LS + + +
Sbjct: 40 DDDAQRPCPAACHCLGDL--LDCSRRRLVRLP--DPLPAWVTRLDLSHNRLSFIQTSSLS 95
Query: 67 GLYKLTELKLRKNHLSELPGKLFIST-----------------------INLSTMDLSQN 103
L L E+KL N L +P IS +L T+DLS N
Sbjct: 96 HLQSLQEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNN 155
Query: 104 LIKTL-----------------------PSTFFKGAIRLTVVQLSYNAIESLPANVFHDL 140
I L P F A L V++L+ N I ++P +F L
Sbjct: 156 NISELRTAFPPLQLKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFK-L 214
Query: 141 ISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNR 200
L+ L+L++N + ++ TF G+ +LK LK+Q N + +L G F L ++ L L +N
Sbjct: 215 PQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNN 274
Query: 201 LS------------------------FIRPGLFNYFKHLTFLELSENWISSLNGDEFSQL 236
L+ I P + + + L+ L+L+ N +S L+ F L
Sbjct: 275 LTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGL 334
Query: 237 TSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQ---ELHAGTFAGLTNLTALFLN 293
+ L LH+G N + I +F L SL+ L L +N I E +G F+GL L L L
Sbjct: 335 SLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQ 394
Query: 294 NNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILY 353
N +R + KAF + L+ L L N + L +++ S + L L L + CDC + +
Sbjct: 395 GNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSLLCDCQLRW 454
Query: 354 MARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMSFD 389
+ +W+ N + + +C P L G+S+ +S D
Sbjct: 455 LPQWVAENNFQSF-VNASCAHPQLLKGRSIFTVSPD 489
>sp|O88279|SLIT1_RAT Slit homolog 1 protein OS=Rattus norvegicus GN=Slit1 PE=1 SV=1
Length = 1531
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 166/393 (42%), Gaps = 58/393 (14%)
Query: 47 IRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIK 106
+RV+ L NQ+ + + AF + +L L+L +N L LP LF + LS +DLS+N ++
Sbjct: 87 LRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQ 146
Query: 107 TLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTF----- 161
+P F+GA L +QL N I + F L LE L L+ N +T+I +F
Sbjct: 147 AVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPK 206
Query: 162 ------------------------------------SGMYSLKRLKLQS----------- 174
SG SL+ L +
Sbjct: 207 LRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQ 266
Query: 175 NRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGL----FNYFKHLTFLELSENWISSLNG 230
Q+P S N + GL N + +T + L N I S+
Sbjct: 267 GEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPP 326
Query: 231 DEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTAL 290
FS L+ + L N I I +F L+SL L LY N I +L G F GL L L
Sbjct: 327 GAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL 386
Query: 291 FLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCA 350
LN N + + AF+ + +L L L NK+Q LA + + L + TL LA+NP+ CDC
Sbjct: 387 LLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCN 446
Query: 351 ILYMARWLRANRRKVWDSKPTCRGPGNLGGKSV 383
+ ++A +LR N + ++ C P L K +
Sbjct: 447 LKWLADFLRTNPIETTGAR--CASPRRLANKRI 477
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 194/451 (43%), Gaps = 83/451 (18%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C I + C + + +P + +P + I L +N + ++ AF+ KL
Sbjct: 282 CPAMCSCSNGI--VDCRGKGLTAIPAN--LPETMTEIRLELNGIKSIPPGAFSPYRKLRR 337
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
+ L N ++E+ F +L+++ L N I LP F G L ++ L+ N I +
Sbjct: 338 IDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIR 397
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFD-DLKYL- 191
+ F DL +L L L N + S+ GTF+ + +++ L L N P I D +LK+L
Sbjct: 398 PDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN------PFICDCNLKWLA 451
Query: 192 DFL----------------SLRNNRLSFIR--------------PGLFNYF--------- 212
DFL L N R+ I+ PG +Y
Sbjct: 452 DFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDV 511
Query: 213 ----------------------------KHLTFLELSENWISSLNGDE-FSQLTSLKELH 243
+ T L L+ N IS L F +L+ LK+++
Sbjct: 512 ACPHKCRCEASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKIN 571
Query: 244 LGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTK 303
L N + I G+F S+ +L L +N ++ + +G F GL L L L NN + +
Sbjct: 572 LSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHND 631
Query: 304 AFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRR 363
+F + +++ L L N + ++ + L L TL L NP++C+C + ++ WLR +R
Sbjct: 632 SFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLR--KR 689
Query: 364 KVWDSKPTCRGPGNLGGKSVEDMSFDDL-CE 393
K+ P C+ P L ++D++F D CE
Sbjct: 690 KIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 122/277 (44%), Gaps = 54/277 (19%)
Query: 120 TVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQ 179
T V ++++P N+ + E L+L+ N +T I F+G+ L+ L+L N+I
Sbjct: 43 TTVDCHGTGLQAIPKNIPRNT---ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGA 99
Query: 180 LPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSL 239
+ G FDD+K L+ L L N+L + LF + L+ L+LSEN + ++ F T L
Sbjct: 100 VERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDL 159
Query: 240 KELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRY 299
K L L +N I I G+F L+ LE L L +NNI + +F
Sbjct: 160 KNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN----------------- 202
Query: 300 LDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLR 359
H+ KL+ T +L N CDC + ++++WLR
Sbjct: 203 ----------HMPKLR---------------------TFRLHSNHLFCDCHLAWLSQWLR 231
Query: 360 ANRRKVWDSKPTCRGPGNLGGKSVEDMSFDDL-CEGQ 395
+R C GP +L G +V ++ + C GQ
Sbjct: 232 --QRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQ 266
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 169/403 (41%), Gaps = 52/403 (12%)
Query: 17 PCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYK----LT 72
P +CR E + C + ++P + IP + L N++S L TGL+K L
Sbjct: 514 PHKCRCEASVVECSGLKLSKIP--ERIPQSTTELRLNNNEISILEA---TGLFKKLSHLK 568
Query: 73 ELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESL 132
++ L N +SE+ F ++S + L+ N ++++ S F+G L + L N I +
Sbjct: 569 KINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCI 628
Query: 133 PANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRIN-------------- 178
+ F L ++ L L N +T+I G F + +L L L +N N
Sbjct: 629 HNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRK 688
Query: 179 -----------------QLPPGIFDDLKYLDFLSLRNNRL--SFIRPGLFNYFKHL-TFL 218
Q+P D+ + DF RP L T +
Sbjct: 689 RKIVTGNPRCQNPDFLRQIP---LQDVAFPDFRCEEGQEEVGCLPRPQCPQECACLDTVV 745
Query: 219 ELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHA 278
S + +L +T EL+L N +P G + + L+ + L +N I L
Sbjct: 746 RCSNKHLQALPKGIPKNVT---ELYLDGNQFTLVP-GQLSTFKYLQLVDLSNNKISSLSN 801
Query: 279 GTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITL 338
+F ++ LT L L+ N L+ + AF+ + L+ L L N + L + + +L L
Sbjct: 802 SSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHL 861
Query: 339 KLAKNPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGK 381
+ NP +CDC + +++ W++ ++ ++ C GP + GK
Sbjct: 862 AIGANPLYCDCHLRWLSSWVKTGYKEPGIAR--CAGPPEMEGK 902
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 145/351 (41%), Gaps = 60/351 (17%)
Query: 26 TLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELP 85
T+ C ++ +P + IP + ++L N ++ + K+ F GL +L L+L +N + +
Sbjct: 44 TVDCHGTGLQAIPKN--IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVE 101
Query: 86 GKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEE 145
F L + L++N ++ LP F+ + +L
Sbjct: 102 RGAFDDMKELERLRLNRNQLQVLPELLFQ------------------------NNQALSR 137
Query: 146 LDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIR 205
LDLS+N L ++ F G LK L+L N+I+ + G F L+ L+ L+L NN ++ I
Sbjct: 138 LDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIP 197
Query: 206 PGLFNYFKHLTFLELSEN---------WIS-------------------SLNGDEFSQLT 237
FN+ L L N W+S SL G +++
Sbjct: 198 VSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQ 257
Query: 238 SLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLT-----NLTALFL 292
+ GQ +PA + ++ S + SN I + + +T + L
Sbjct: 258 KSEFSCSGQGEAAQVPACTLSS-GSCPAMCSCSNGIVDCRGKGLTAIPANLPETMTEIRL 316
Query: 293 NNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
N ++ + AF P L+++ L +N++ +A D+ L +L +L L N
Sbjct: 317 ELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
>sp|O75094|SLIT3_HUMAN Slit homolog 3 protein OS=Homo sapiens GN=SLIT3 PE=2 SV=3
Length = 1523
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 201/455 (44%), Gaps = 77/455 (16%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C PC C I + C + + E+P + +P I I L N + + AFT KL
Sbjct: 280 CPSPCTCSNNI--VDCRGKGLMEIPAN--LPEGIVEIRLEQNSIKAIPAGAFTQYKKLKR 335
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
+ + KN +S++ F +L+++ L N I + F G + L ++ L+ N I L
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLR 395
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFD-DLKYL- 191
N F DL +L L L N L +I G F+ + S++ L L N P + D LK+L
Sbjct: 396 VNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN------PFVCDCHLKWLA 449
Query: 192 DFLS----------------LRNNRLSFIRPGLF---------NYFKHLTFLE------- 219
D+L L N R+S I+ F + F F++
Sbjct: 450 DYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKC 509
Query: 220 -----------------------------LSENWISSLNGDE-FSQLTSLKELHLGQNYI 249
L++N +S L F +L +L++++L N I
Sbjct: 510 RCEGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKI 569
Query: 250 ETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPML 309
+ + G+F S+++L L N ++ +H F GL+ L L L +NL+ + F +
Sbjct: 570 KEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLS 629
Query: 310 HLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSK 369
++ L L N++ + + + L +L T+ L NP++C+C + ++ +WLR +R++
Sbjct: 630 SVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLR--KRRIVSGN 687
Query: 370 PTCRGPGNLGGKSVEDMSFDDL-CEGQWASMVKLT 403
P C+ P L ++D++ D C+G S +L+
Sbjct: 688 PRCQKPFFLKEIPIQDVAIQDFTCDGNEESSCQLS 722
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 177/403 (43%), Gaps = 72/403 (17%)
Query: 46 DIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLI 105
++RV+ L NQ+S + + AF L +L L+L KN L LP LF ST L+ +DLS+N I
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 106 KTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMY 165
+ +P F+G + +QL N I + F L LE L L+ N ++ I +F+ M
Sbjct: 146 QGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 166 SLKRLKLQSNRINQLPPGIFDDLKYLDFLS--LRNNRL---------------------- 201
++ L+L SN ++ D +L +LS LR R
Sbjct: 206 KIRTLRLHSNH-------LYCDC-HLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQ 257
Query: 202 --SFIRPGLFNYFKHLTFLELS-------ENWISSLNGDEFSQLTS-----LKELHLGQN 247
++ P + +S N I G ++ + + E+ L QN
Sbjct: 258 KKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEIRLEQN 317
Query: 248 YIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFL--------------- 292
I+ IPAG+F + L+++ + N I ++ F GL +LT+L L
Sbjct: 318 SIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDG 377
Query: 293 ---------NNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
N N + L F+ + +L L L NKLQ ++ + L ++ TL LA+N
Sbjct: 378 LVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Query: 344 PWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDM 386
P+ CDC + ++A +L+ N + S C P L K + +
Sbjct: 438 PFVCDCHLKWLADYLQDN--PIETSGARCSSPRRLANKRISQI 478
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 155/346 (44%), Gaps = 53/346 (15%)
Query: 71 LTELKLRKNHLSELPGK-LFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAI 129
+T+L+L N +S L +F NL ++LS N IK + F GA + + L+ N +
Sbjct: 534 VTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQL 593
Query: 130 ESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLK 189
E++ VF L L+ L L N++ + TF+G+ S++ L L NRI + PG F L
Sbjct: 594 ETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLV 653
Query: 190 YLDFLSL------------------RNNRLSFIRPGLFNYF--KHLTFLELS-ENWISSL 228
L ++L R R+ P F K + +++ +++
Sbjct: 654 SLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDG 713
Query: 229 NGDEFSQLT------------------------------SLKELHLGQNYIETIPAGSFA 258
N + QL+ + EL+L N++ +P +
Sbjct: 714 NEESSCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMPKDVTELYLEGNHLTAVPR-ELS 772
Query: 259 NLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDS 318
L+ L + L +N+I L TF+ +++L+ L L+ N LR + AF + L+ L L
Sbjct: 773 ALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHG 832
Query: 319 NKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRK 364
N + + S + L +L L L NP HCDC++ +++ W++A ++
Sbjct: 833 NDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKE 878
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 180 LPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSL 239
+P GI + + LD L N ++ I F K+L L L +N +S + F L L
Sbjct: 55 VPRGIPRNAERLD---LDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQL 111
Query: 240 KELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRY 299
+ L L +N ++ +P F + L +L L N IQ + F G+T++ L L+NN +
Sbjct: 112 ERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISC 171
Query: 300 LDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLR 359
++ AF + L+ L L++N + + S + +P + TL+L N +CDC + +++ WLR
Sbjct: 172 IEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLR 231
Query: 360 ANRRKVWDSKPTCRGPGNLGGKSVEDM 386
+R+ C P +L G +V D+
Sbjct: 232 --QRRTVGQFTLCMAPVHLRGFNVADV 256
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 147/350 (42%), Gaps = 42/350 (12%)
Query: 17 PCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKL 76
P +C ++ C + +P + IP + +DL N ++ ++K F GL L L L
Sbjct: 35 PTKCTCSAASVDCHGLGLRAVP--RGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHL 92
Query: 77 RKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANV 136
N +S + F L + L++N ++ LP F+ +LT + LS N I+ +P
Sbjct: 93 EDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKA 152
Query: 137 FHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSL 196
F + ++ L L N ++ I+ G F + L+ L L +N I+++ F+ + + L L
Sbjct: 153 FRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRL 212
Query: 197 RNNRLSFIRPGLFNYFK-HLTFLELSENWISSLNGDEFSQLT-SLKELHL---------G 245
+N L Y HL +L +W+ Q T + +HL
Sbjct: 213 HSNHL---------YCDCHLAWL---SDWLRQRR--TVGQFTLCMAPVHLRGFNVADVQK 258
Query: 246 QNYI----ETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTA--------LFLN 293
+ Y+ + P AN S SNNI + GL + A + L
Sbjct: 259 KEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRG---KGLMEIPANLPEGIVEIRLE 315
Query: 294 NNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKN 343
N ++ + AF LK++ + N++ +A D+ L +L +L L N
Sbjct: 316 QNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGN 365
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C + + LP + +P D+ + L N L+ + ++ + L LT
Sbjct: 725 CPEQCTCMETV--VRCSNKGLRALP--RGMPKDVTELYLEGNHLTAVPRE-LSALRHLTL 779
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
+ L N +S L F + +LST+ LS N ++ +P F G L V+ L N I S+P
Sbjct: 780 IDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVP 839
Query: 134 ANVFHDLISLEELDLSQNVL 153
F+DL SL L L N L
Sbjct: 840 EGSFNDLTSLSHLALGTNPL 859
>sp|Q6UXM1|LRIG3_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 3
OS=Homo sapiens GN=LRIG3 PE=2 SV=1
Length = 1119
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 198/451 (43%), Gaps = 79/451 (17%)
Query: 12 RCCEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKL 71
R C CRC ++ L C ++ + LP + +P + +DL N+LS + + + L L
Sbjct: 45 RPCPTTCRCLGDL--LDCSRKRLARLP--EPLPSWVARLDLSHNRLSFIKASSMSHLQSL 100
Query: 72 TELKLRKNHLSELP---------------GKLFISTI--------NLSTMDLSQNLIKTL 108
E+KL N L +P G + + +L T+DLS N I L
Sbjct: 101 REVKLNNNELETIPNLGPVSANITLLSLAGNRIVEILPEHLKEFQSLETLDLSSNNISEL 160
Query: 109 -----------------------PSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEE 145
P F A L V++L+ N I ++P +F L L+
Sbjct: 161 QTAFPALQLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFK-LPQLQH 219
Query: 146 LDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLS--- 202
L+L++N + ++ TF G+ +LK LK+Q N + +L G F L ++ L L +N L+
Sbjct: 220 LELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEIT 279
Query: 203 ---------------------FIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKE 241
I P + + + L+ L+L+ N +S L+ F L+ L
Sbjct: 280 KGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNT 339
Query: 242 LHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQ---ELHAGTFAGLTNLTALFLNNNLLR 298
LH+G N + I +F L SL+ L L +N I E G F+GL L L L N +R
Sbjct: 340 LHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIR 399
Query: 299 YLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWL 358
+ KAF + L+ L L N + L ++ S + L L L + CDC + ++ +W+
Sbjct: 400 SITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLLCDCQLKWLPQWV 459
Query: 359 RANRRKVWDSKPTCRGPGNLGGKSVEDMSFD 389
N + + +C P L G+S+ +S D
Sbjct: 460 AENNFQSF-VNASCAHPQLLKGRSIFAVSPD 489
>sp|O15335|CHAD_HUMAN Chondroadherin OS=Homo sapiens GN=CHAD PE=2 SV=2
Length = 359
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 146/313 (46%), Gaps = 30/313 (9%)
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L L++N+ L F + NL ++ L I+ + + F+G +L + LS+N I L
Sbjct: 56 LNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLR 115
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
A F DL L L L N +T + G S + +L L+L +N+I +L G F K L +
Sbjct: 116 AGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRW 175
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIP 253
L L N LS ++PG + ++L + N +SS S+L ++EL L N +++IP
Sbjct: 176 LYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIP 235
Query: 254 AGSFANL-QSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312
+F + + LE L+L + N+++ G F G+T L + L NN L
Sbjct: 236 DNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLN-------------- 281
Query: 313 KLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTC 372
QL SN DSL TL L NPW C C + + RWL A K TC
Sbjct: 282 --QLPSN----FPFDSLE------TLALTNNPWKCTCQLRGLRRWLEA---KASRPDATC 326
Query: 373 RGPGNLGGKSVED 385
P G+ + D
Sbjct: 327 ASPAKFKGQHIRD 339
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 87/177 (49%)
Query: 168 KRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISS 227
K L LQ N L F + L L L++ ++ + G F K L +L LS N I
Sbjct: 54 KLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRV 113
Query: 228 LNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNL 287
L F LT L L+L N + +P G + L +L L L +N I+EL AG F G +L
Sbjct: 114 LRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDL 173
Query: 288 TALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNP 344
L+L+ N L L A + + +L K +D N+L + +LS L + LKL+ NP
Sbjct: 174 RWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNP 230
>sp|P83503|NYX_MOUSE Nyctalopin OS=Mus musculus GN=Nyx PE=2 SV=1
Length = 476
Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 173/390 (44%), Gaps = 33/390 (8%)
Query: 8 DSWYRCCEGPCRCR--PEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAF 65
++ R C C C ++ C + ++ +P Q P + IDL N L L + AF
Sbjct: 20 EACLRACPAACTCSHVERGCSVRCDRAGLQRVP--QEFPCEAASIDLDRNGLRILGERAF 77
Query: 66 TGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQN-LIKTLPSTFFKGAIRLTVVQL 124
L L L LR N+LS + F L+ + L+ N ++ L F RL + L
Sbjct: 78 GTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGELRYLHVRTFAALGRLRRLDL 137
Query: 125 SYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGI 184
+ + S+P + +L +L EL N+ + G G+ +L + +RI + G
Sbjct: 138 AACRLFSVPERLLAELPALRELTAFDNLFRRVP-GALRGLANLTHAHFERSRIEAVASGS 196
Query: 185 FDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHL 244
++ L LSL+ NR+ + G F L L L++N +++L F L L+ L+L
Sbjct: 197 LLGMRRLRSLSLQANRVRAVHAGAFGDCGALEDLLLNDNLLATLPAAAFRGLRRLRTLNL 256
Query: 245 GQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKA 304
G N + ++ F++L LE L+L N+I + G F L+ L AL LN N L L A
Sbjct: 257 GGNALGSVARAWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRLTVLSWAA 316
Query: 305 FEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRK 364
F+P L + L L +NPW CDC + ++ W+ + R
Sbjct: 317 FQPGFFLGR------------------------LFLFRNPWRCDCQLEWLRDWMEGSGRV 352
Query: 365 VWDSKPTCRGPGNLGGKSVEDMSFDDLCEG 394
+ C PG++ G+ + + F+ +G
Sbjct: 353 ---ADVACASPGSVAGQDLSQVVFERSSDG 379
>sp|Q27972|CHAD_BOVIN Chondroadherin OS=Bos taurus GN=CHAD PE=1 SV=1
Length = 361
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 163/373 (43%), Gaps = 57/373 (15%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C ++ + C K ++++P + ++++L N L+ ++F +
Sbjct: 25 CPQNCHCHSDLQHVICDKVGLQKIP---KVSEKTKLLNLQRNNFPVLATNSFRAM----- 76
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
NL ++ L I+ + + F+G +L + LS+N I L
Sbjct: 77 -------------------PNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLR 117
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
A F DL L L L N +T + G S + +L L+L +N+I +L G F K L +
Sbjct: 118 AGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRW 177
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIP 253
L L N LS ++PG + ++L L N +SS S+L ++EL L N +++IP
Sbjct: 178 LYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIP 237
Query: 254 AGSFANL-QSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312
+F + + LE L+L + N+++ G F G+T L + L NN L
Sbjct: 238 DNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLH-------------- 283
Query: 313 KLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTC 372
QL SN DSL TL L NPW C C + + RWL A K TC
Sbjct: 284 --QLPSN----FPFDSLE------TLTLTNNPWKCTCQLRGLRRWLEA---KTSRPDATC 328
Query: 373 RGPGNLGGKSVED 385
P G+ + D
Sbjct: 329 ASPAKFRGQHIRD 341
>sp|O70210|CHAD_RAT Chondroadherin OS=Rattus norvegicus GN=Chad PE=2 SV=1
Length = 358
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 10/291 (3%)
Query: 98 MDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQ 157
++L +N L + F+ L + L + I + A F L L L LS N + ++
Sbjct: 55 LNLQRNNFPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLR 114
Query: 158 YGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTF 217
G F + L L L N++++LP G+ L L L L NN++ +R G F K L +
Sbjct: 115 AGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRW 174
Query: 218 LELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELH 277
L LSEN ++SL+ + +L + HL +N + + P+ + + L+ +E+L L N ++ +
Sbjct: 175 LYLSENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIP 234
Query: 278 AGTFAGLTN-LTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLP--N 334
F L L+L+N L AF + LK + L++N+L L S P N
Sbjct: 235 DNAFQSFGRYLETLWLDNTNLEKFSDAAFAGVTTLKHVHLENNRLNQLP----STFPFDN 290
Query: 335 LITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVED 385
L TL L NPW C C + + RWL A K TC P G+ + D
Sbjct: 291 LETLTLTNNPWKCTCQLRGLRRWLEA---KTSRPDATCSSPAKFKGQRIRD 338
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Query: 168 KRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISS 227
K L LQ N L F + L L L++ + + G F K L +L LS N I
Sbjct: 53 KLLNLQRNNFPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRV 112
Query: 228 LNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNL 287
L F LT L L+L N + +P G + L +L L L +N I+EL AG F G +L
Sbjct: 113 LRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDL 172
Query: 288 TALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHC 347
L+L+ N L L + + + +L K LD N+L + +LS L + LKL+ NP
Sbjct: 173 RWLYLSENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKS 232
Query: 348 --DCAILYMARWL 358
D A R+L
Sbjct: 233 IPDNAFQSFGRYL 245
>sp|O55226|CHAD_MOUSE Chondroadherin OS=Mus musculus GN=Chad PE=2 SV=1
Length = 358
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 166/375 (44%), Gaps = 61/375 (16%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C ++ + C K ++++P +++ + L
Sbjct: 22 CPQNCHCHGDLQHVICDKVGLQKIP--------------KVSETTKL------------- 54
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L L++N+ L F + NL ++ L I+ + + F+G +L + LS+N I L
Sbjct: 55 LNLQRNNFPVLAANSFRTMPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLR 114
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
A F DL L L L N ++ + G S + +L L+L +N+I +L G F K L +
Sbjct: 115 AGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRW 174
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIP 253
L L N LS ++PG + ++L L +N +SS S+L ++EL L N +++IP
Sbjct: 175 LYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLKSIP 234
Query: 254 AGSFANL-QSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312
+F + + LE L+L + N+++ F+G+T LK
Sbjct: 235 DNAFQSFGRYLETLWLDNTNLEKFSDAAFSGVTT------------------------LK 270
Query: 313 KLQLDSNKLQYLATDSLSLLP--NLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKP 370
+ LD+N+L L S P NL TL L NPW C C + + RWL A K
Sbjct: 271 HVHLDNNRLNQLP----SSFPFDNLETLTLTNNPWKCTCQLRGLRRWLEA---KASRPDA 323
Query: 371 TCRGPGNLGGKSVED 385
TC P G+ + D
Sbjct: 324 TCSSPAKFKGQRIRD 338
>sp|Q45R42|LRRC4_RAT Leucine-rich repeat-containing protein 4 OS=Rattus norvegicus
GN=Lrrc4 PE=1 SV=1
Length = 652
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 136/266 (51%), Gaps = 6/266 (2%)
Query: 127 NAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFD 186
N I+ + A+ F L LE L L +N + I+ G F+G+ SL L+L N + +P G F+
Sbjct: 84 NNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFE 143
Query: 187 DLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSE-NWISSLNGDEFSQLTSLKELHLG 245
L L L LRNN + I FN L L+L E + ++ F L +LK L+LG
Sbjct: 144 YLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLG 203
Query: 246 QNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAF 305
I+ +P + L LE+L + N+ E+ G+F GL++L L++ N+ + ++ AF
Sbjct: 204 MCNIKDMP--NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 261
Query: 306 EPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKV 365
+ + L +L L N L L D + L L+ L L NPW+CDC IL++A WLR
Sbjct: 262 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTN 321
Query: 366 WDSKPTCRGPGNLGGK---SVEDMSF 388
C P ++ G+ V+ SF
Sbjct: 322 STCCGRCHAPMHMRGRYLVEVDQASF 347
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 5/259 (1%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C ++ + E+P Q IP + R ++L N + + D F L+ L
Sbjct: 45 CPSVCSCSNQFSKVVCTRRGLSEVP--QGIPSNTRYLNLMENNIQMIQADTFRHLHHLEV 102
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L+L +N + ++ F +L+T++L N + +PS F+ +L + L N IES+P
Sbjct: 103 LQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIP 162
Query: 134 ANVFHDLISLEELDLSQ-NVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLD 192
+ F+ + SL LDL + L I G F G+++LK L L I +P L L+
Sbjct: 163 SYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLE 220
Query: 193 FLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETI 252
L + N IRPG F+ L L + + +S + + F L SL EL+L N + ++
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 253 PAGSFANLQSLEKLFLYSN 271
P F L+ L +L L+ N
Sbjct: 281 PHDLFTPLRYLVELHLHHN 299
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 217 FLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQEL 276
+L L EN I + D F L L+ L LG+N I I G+F L SL L L+ N + +
Sbjct: 78 YLNLMENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVI 137
Query: 277 HAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDS-NKLQYLATDSLSLLPNL 335
+G F L+ L L+L NN + + + AF + L +L L KL+Y++ + L NL
Sbjct: 138 PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNL 197
Query: 336 ITLKLA 341
L L
Sbjct: 198 KYLNLG 203
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%)
Query: 240 KELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRY 299
+ L+L +N I+ I A +F +L LE L L N I+++ G F GL +L L L +N L
Sbjct: 77 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTV 136
Query: 300 LDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAK 342
+ + AFE + L++L L +N ++ + + + + +P+L+ L L +
Sbjct: 137 IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE 179
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 50 IDLG-INQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTL 108
+DLG + +L +S+ AF GL+ L L L ++ ++P + L +++S N +
Sbjct: 175 LDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLEELEMSGNHFPEI 232
Query: 109 PSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLK 168
F G L + + + + + N F L SL EL+L+ N L+S+ + F+ + L
Sbjct: 233 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLV 292
Query: 169 RLKLQSNRIN 178
L L N N
Sbjct: 293 ELHLHHNPWN 302
>sp|Q9HBW1|LRRC4_HUMAN Leucine-rich repeat-containing protein 4 OS=Homo sapiens GN=LRRC4
PE=1 SV=2
Length = 653
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 136/266 (51%), Gaps = 6/266 (2%)
Query: 127 NAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFD 186
N I+ + A+ F L LE L L +N + I+ G F+G+ SL L+L N + +P G F+
Sbjct: 85 NNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFE 144
Query: 187 DLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSE-NWISSLNGDEFSQLTSLKELHLG 245
L L L LRNN + I FN L L+L E + ++ F L +LK L+LG
Sbjct: 145 YLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLG 204
Query: 246 QNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAF 305
I+ +P + L LE+L + N+ E+ G+F GL++L L++ N+ + ++ AF
Sbjct: 205 MCNIKDMP--NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 262
Query: 306 EPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKV 365
+ + L +L L N L L D + L L+ L L NPW+CDC IL++A WLR
Sbjct: 263 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTN 322
Query: 366 WDSKPTCRGPGNLGGK---SVEDMSF 388
C P ++ G+ V+ SF
Sbjct: 323 STCCGRCHAPMHMRGRYLVEVDQASF 348
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 5/259 (1%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C ++ + E+P Q IP + R ++L N + + D F L+ L
Sbjct: 46 CPSVCSCSNQFSKVVCTRRGLSEVP--QGIPSNTRYLNLMENNIQMIQADTFRHLHHLEV 103
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L+L +N + ++ F +L+T++L N + +PS F+ +L + L N IES+P
Sbjct: 104 LQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIP 163
Query: 134 ANVFHDLISLEELDLSQ-NVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLD 192
+ F+ + SL LDL + L I G F G+++LK L L I +P L L+
Sbjct: 164 SYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLE 221
Query: 193 FLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETI 252
L + N IRPG F+ L L + + +S + + F L SL EL+L N + ++
Sbjct: 222 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
Query: 253 PAGSFANLQSLEKLFLYSN 271
P F L+ L +L L+ N
Sbjct: 282 PHDLFTPLRYLVELHLHHN 300
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 217 FLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQEL 276
+L L EN I + D F L L+ L LG+N I I G+F L SL L L+ N + +
Sbjct: 79 YLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVI 138
Query: 277 HAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDS-NKLQYLATDSLSLLPNL 335
+G F L+ L L+L NN + + + AF + L +L L KL+Y++ + L NL
Sbjct: 139 PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNL 198
Query: 336 ITLKLA 341
L L
Sbjct: 199 KYLNLG 204
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 62/103 (60%)
Query: 240 KELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRY 299
+ L+L +N I+ I A +F +L LE L L N+I+++ G F GL +L L L +N L
Sbjct: 78 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTV 137
Query: 300 LDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAK 342
+ + AFE + L++L L +N ++ + + + + +P+L+ L L +
Sbjct: 138 IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE 180
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 43 IPVDIRVIDLG-INQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLS 101
+P +R +DLG + +L +S+ AF GL+ L L L ++ ++P + L +++S
Sbjct: 170 VPSLMR-LDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLEELEMS 226
Query: 102 QNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTF 161
N + F G L + + + + + N F L SL EL+L+ N L+S+ + F
Sbjct: 227 GNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLF 286
Query: 162 SGMYSLKRLKLQSNRIN 178
+ + L L L N N
Sbjct: 287 TPLRYLVELHLHHNPWN 303
>sp|Q66HV9|LIG1B_DANRE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1-B OS=Danio rerio
GN=lingo1b PE=1 SV=1
Length = 622
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 180/377 (47%), Gaps = 14/377 (3%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + ++ C ++ + LP + IP+D R++DL N+L ++ + F +L +
Sbjct: 44 CPSRCECSAQERSVVCHRRKLITLP--EGIPIDTRLLDLSKNRLKAINPEEFLNYPQLED 101
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L+L +N +S + F + + L T+ L N +K + F G LT + +S N I L
Sbjct: 102 LQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVILL 161
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDF 193
+F +L +L+EL++ N L I + F G+ SL++L ++ + +P F L L
Sbjct: 162 DYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLT 221
Query: 194 LSLRNNRLSFIRPGLFNYFKHLTFLELSENW--ISSLNGDEFSQLTSLKELHLGQNYIET 251
L LR+ ++ IR F L LE++ NW + SL L ++ L + +
Sbjct: 222 LKLRHLNVNVIRDFSFRRLYRLKILEIA-NWPLLESLTAKSLHGL-NITTLSITNCNLTA 279
Query: 252 IPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHL 311
+P + +L L L N I+ + L L A L L ++ +F+ + +L
Sbjct: 280 VPYVAIQHLVYLRFFNLSFNPIEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFKGLNYL 339
Query: 312 KKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYM--ARW-LRANRRKVWDS 368
+ L + SN L L + + NL TL L NP CDC +L++ RW L NR+
Sbjct: 340 RVLNVSSNSLSTLEESAFHSVGNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQ----- 394
Query: 369 KPTCRGPGNLGGKSVED 385
+P+C P L GK +D
Sbjct: 395 QPSCETPEFLQGKEFKD 411
>sp|B4F7C5|LRRT4_RAT Leucine-rich repeat transmembrane neuronal protein 4 OS=Rattus
norvegicus GN=Lrrtm4 PE=1 SV=1
Length = 590
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 165/374 (44%), Gaps = 53/374 (14%)
Query: 12 RCCEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKL 71
R C CRC +I + C ++P + I + + L N + L + F GL +L
Sbjct: 32 RACPKNCRCDGKI--VYCESHAFADIPEN--ISGGSQGLSLRFNSIQKLKSNQFAGLNQL 87
Query: 72 TELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIES 131
L L N++S ++ F+G RL + LS N I
Sbjct: 88 IWLYLDHNYIS------------------------SVDEDAFQGIRRLKELILSSNKITY 123
Query: 132 LPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYL 191
L FH + +L LDLS N L ++Q F G+ L L L+SN + +P +F D + L
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 192 DFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIET 251
DFL L NRL + F L L L N S +N F +L +L+ ++L N I +
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 243
Query: 252 IPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHL 311
+ G SL L L N+IQ + GTF L NL
Sbjct: 244 VSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNL------------------------ 279
Query: 312 KKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPT 371
+KL LDSNKL ++ ++++ +LI++ L+ N W C +I + WL+ N + +S
Sbjct: 280 QKLNLDSNKLTNVSQETVNAWISLISITLSGNMWECSRSICPLFYWLK-NFKGNKESTMI 338
Query: 372 CRGPGNLGGKSVED 385
C GP ++ G+ V D
Sbjct: 339 CAGPKHIQGEKVSD 352
>sp|Q86VH4|LRRT4_HUMAN Leucine-rich repeat transmembrane neuronal protein 4 OS=Homo
sapiens GN=LRRTM4 PE=2 SV=2
Length = 590
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 165/374 (44%), Gaps = 53/374 (14%)
Query: 12 RCCEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKL 71
R C CRC +I + C ++P + I + + L N + L + F GL +L
Sbjct: 32 RACPKNCRCDGKI--VYCESHAFADIPEN--ISGGSQGLSLRFNSIQKLKSNQFAGLNQL 87
Query: 72 TELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIES 131
L L N++S ++ F+G RL + LS N I
Sbjct: 88 IWLYLDHNYIS------------------------SVDEDAFQGIRRLKELILSSNKITY 123
Query: 132 LPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYL 191
L FH + +L LDLS N L ++Q F G+ L L L+SN + +P +F D + L
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 192 DFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIET 251
DFL L NRL + F L L L N S +N F +L +L+ ++L N I +
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 243
Query: 252 IPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHL 311
I G SL L L N+IQ + GTF L NL
Sbjct: 244 ISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNL------------------------ 279
Query: 312 KKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPT 371
+KL LDSNKL ++ ++++ +LI++ L+ N W C +I + WL+ N + +S
Sbjct: 280 QKLNLDSNKLTNISQETVNAWISLISITLSGNMWECSRSICPLFYWLK-NFKGNKESTMI 338
Query: 372 CRGPGNLGGKSVED 385
C GP ++ G+ V D
Sbjct: 339 CAGPKHIQGEKVSD 352
>sp|Q99PH1|LRRC4_MOUSE Leucine-rich repeat-containing protein 4 OS=Mus musculus GN=Lrrc4
PE=1 SV=2
Length = 652
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 132/256 (51%), Gaps = 3/256 (1%)
Query: 127 NAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFD 186
N I+ + A+ F L LE L L +N + I+ G F+G+ SL L+L N + +P G F+
Sbjct: 84 NNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFE 143
Query: 187 DLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSE-NWISSLNGDEFSQLTSLKELHLG 245
L L L LRNN + I FN L L+L E + ++ F L +LK L+LG
Sbjct: 144 YLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLG 203
Query: 246 QNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAF 305
I+ +P + L LE+L + N+ E+ G+F GL++L L++ N+ + ++ AF
Sbjct: 204 MCNIKDMP--NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 261
Query: 306 EPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKV 365
+ + L +L L N L L D + L L+ L L NPW+CDC IL++A WLR
Sbjct: 262 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTN 321
Query: 366 WDSKPTCRGPGNLGGK 381
C P ++ G+
Sbjct: 322 STCCGRCHAPMHMRGR 337
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 5/259 (1%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C + + C ++ + E+P Q IP + R ++L N + + D F L+ L
Sbjct: 45 CPSVCSCSNQFSKVVCTRRGLSEVP--QGIPSNTRYLNLMENNIQMIQADTFRHLHHLEV 102
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
L+L +N + ++ F +L+T++L N + +PS F+ +L + L N IES+P
Sbjct: 103 LQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIP 162
Query: 134 ANVFHDLISLEELDLSQ-NVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLD 192
+ F+ + SL LDL + L I G F G+++LK L L I +P L L+
Sbjct: 163 SYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLE 220
Query: 193 FLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETI 252
L + N IRPG F+ L L + + +S + + F L SL EL+L N + ++
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 253 PAGSFANLQSLEKLFLYSN 271
P F L+ L +L L+ N
Sbjct: 281 PHDLFTPLRYLVELHLHHN 299
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 217 FLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQEL 276
+L L EN I + D F L L+ L LG+N I I G+F L SL L L+ N + +
Sbjct: 78 YLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVI 137
Query: 277 HAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDS-NKLQYLATDSLSLLPNL 335
+G F L+ L L+L NN + + + AF + L +L L KL+Y++ + L NL
Sbjct: 138 PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNL 197
Query: 336 ITLKLA 341
L L
Sbjct: 198 KYLNLG 203
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 62/103 (60%)
Query: 240 KELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRY 299
+ L+L +N I+ I A +F +L LE L L N+I+++ G F GL +L L L +N L
Sbjct: 77 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTV 136
Query: 300 LDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAK 342
+ + AFE + L++L L +N ++ + + + + +P+L+ L L +
Sbjct: 137 IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE 179
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 50 IDLG-INQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTL 108
+DLG + +L +S+ AF GL+ L L L ++ ++P + L +++S N +
Sbjct: 175 LDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLEELEMSGNHFPEI 232
Query: 109 PSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLK 168
F G L + + + + + N F L SL EL+L+ N L+S+ + F+ + L
Sbjct: 233 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLV 292
Query: 169 RLKLQSNRIN 178
L L N N
Sbjct: 293 ELHLHHNPWN 302
>sp|Q80XG9|LRRT4_MOUSE Leucine-rich repeat transmembrane neuronal protein 4 OS=Mus
musculus GN=Lrrtm4 PE=1 SV=2
Length = 590
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 165/374 (44%), Gaps = 53/374 (14%)
Query: 12 RCCEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKL 71
R C CRC +I + C ++P + I + + L N + L + F GL +L
Sbjct: 32 RACPKNCRCDGKI--VYCESHAFADIPEN--ISGGSQGLSLRFNSIQKLKSNQFAGLNQL 87
Query: 72 TELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIES 131
L L N++S ++ F+G RL + LS N I
Sbjct: 88 IWLYLDHNYIS------------------------SVDEDAFQGIRRLKELILSSNKITY 123
Query: 132 LPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYL 191
L FH + +L LDLS N L ++Q F G+ L L L+SN + +P +F D + L
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 192 DFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIET 251
DFL L NRL + F L L L N S +N F +L +L+ ++L N I +
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 243
Query: 252 IPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHL 311
+ G SL L L N+IQ + GTF L NL
Sbjct: 244 VSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNL------------------------ 279
Query: 312 KKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPT 371
+KL LDSNKL ++ ++++ +LI++ L+ N W C +I + WL+ N + +S
Sbjct: 280 QKLNLDSNKLTNVSQETVNAWISLISITLSGNMWECSRSICPLFYWLK-NFKGNKESTMI 338
Query: 372 CRGPGNLGGKSVED 385
C GP ++ G+ V D
Sbjct: 339 CAGPKHIQGEKVSD 352
>sp|O75093|SLIT1_HUMAN Slit homolog 1 protein OS=Homo sapiens GN=SLIT1 PE=2 SV=4
Length = 1534
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 196/451 (43%), Gaps = 83/451 (18%)
Query: 14 CEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTE 73
C C C I + C + + +P + +P + I L +N + ++ AF+ KL
Sbjct: 282 CPAMCTCSNGI--VDCRGKGLTAIPAN--LPETMTEIRLELNGIKSIPPGAFSPYRKLRR 337
Query: 74 LKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLP 133
+ L N ++E+ F +L+++ L N I LP F G L ++ L+ N I +
Sbjct: 338 IDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIR 397
Query: 134 ANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFD-DLKYL- 191
+ F DL +L L L N + S+ GTF+ + +++ L L N P I D +LK+L
Sbjct: 398 PDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN------PFICDCNLKWLA 451
Query: 192 DFL----------------SLRNNRLSFIR--------------PGLFNY---------- 211
DFL L N R+ I+ PG +Y
Sbjct: 452 DFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDV 511
Query: 212 -FKHLTFLELSENWISS------------------LNGDE---------FSQLTSLKELH 243
H E + SS LN +E F +LT LK+++
Sbjct: 512 VCPHKCRCEANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKIN 571
Query: 244 LGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTK 303
L N + I G+F S+ +L L +N ++ + +G F GL L L L NN + +
Sbjct: 572 LSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHND 631
Query: 304 AFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRR 363
+F + +++ L L N++ ++ + L +L TL L NP++C+C + ++ WLR +R
Sbjct: 632 SFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLR--KR 689
Query: 364 KVWDSKPTCRGPGNLGGKSVEDMSFDDL-CE 393
K+ P C+ P L ++D++F D CE
Sbjct: 690 KIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 184/439 (41%), Gaps = 86/439 (19%)
Query: 26 TLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELP 85
T+ C ++ +P + IP + ++L N ++ + K+ F GL +L L+L +N + +
Sbjct: 44 TVDCHGTGLQAIPKN--IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVE 101
Query: 86 GKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEE 145
F L + L++N + LP F+ L+ + LS NAI+++P F L+
Sbjct: 102 RGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKN 161
Query: 146 LDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFI- 204
L L +N ++ I+ G F + L+ L L +N I +P F+ + L L +N L F
Sbjct: 162 LQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL-FCD 220
Query: 205 ------------RP--GLFNY------FKHLTFLELSENWISSLNGDEFSQLT------- 237
RP GLF + L E+ ++ S E ++
Sbjct: 221 CHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG 280
Query: 238 -----------------------------SLKELHLGQNYIETIPAGSFA---------- 258
++ E+ L N I++IP G+F+
Sbjct: 281 SCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDL 340
Query: 259 --------------NLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKA 304
L+SL L LY N I +L G F GL L L LN N + + A
Sbjct: 341 SNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDA 400
Query: 305 FEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRK 364
F+ + +L L L NK+Q LA + + L + TL LA+NP+ CDC + ++A +LR N
Sbjct: 401 FQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTN--P 458
Query: 365 VWDSKPTCRGPGNLGGKSV 383
+ S C P L K +
Sbjct: 459 IETSGARCASPRRLANKRI 477
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 122/277 (44%), Gaps = 54/277 (19%)
Query: 120 TVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQ 179
T V ++++P N+ + E L+L+ N +T I F+G+ L+ L+L N+I
Sbjct: 43 TTVDCHGTGLQAIPKNIPRNT---ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGA 99
Query: 180 LPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSL 239
+ G FDD+K L+ L L N+L + LF + L+ L+LSEN I ++ F T L
Sbjct: 100 VERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDL 159
Query: 240 KELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRY 299
K L L +N I I G+F L+ LE L L +NNI + +F
Sbjct: 160 KNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN----------------- 202
Query: 300 LDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLR 359
H+ KL+ T +L N CDC + ++++WLR
Sbjct: 203 ----------HMPKLR---------------------TFRLHSNHLFCDCHLAWLSQWLR 231
Query: 360 ANRRKVWDSKPTCRGPGNLGGKSVEDMSFDDL-CEGQ 395
+R C GP +L G +V ++ + C GQ
Sbjct: 232 --QRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQ 266
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 168/400 (42%), Gaps = 46/400 (11%)
Query: 17 PCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDA-FTGLYKLTELK 75
P +CR E + + C + ++P + IP + L N++S L F L L ++
Sbjct: 514 PHKCRCEANVVECSSLKLTKIP--ERIPQSTAELRLNNNEISILEATGMFKKLTHLKKIN 571
Query: 76 LRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPAN 135
L N +SE+ F ++S + L+ N ++++ S F+G L + L N I + +
Sbjct: 572 LSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHND 631
Query: 136 VFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRIN----------------- 178
F L ++ L L N +T++ G F + SL L L +N N
Sbjct: 632 SFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKI 691
Query: 179 --------------QLPPGIFDDLKYLDFLSLRNNRLSFI--RPGLFNYFKHL-TFLELS 221
Q+P D+ + DF RP L T + S
Sbjct: 692 VTGNPRCQNPDFLRQIP---LQDVAFPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCS 748
Query: 222 ENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTF 281
+ +L +T EL+L N +P G + + L+ + L +N I L +F
Sbjct: 749 NKHLRALPKGIPKNVT---ELYLDGNQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSF 804
Query: 282 AGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLA 341
++ LT L L+ N L+ + AF+ + L+ L L N + L + + +L L +
Sbjct: 805 TNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIG 864
Query: 342 KNPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGK 381
NP +CDC + +++ W++ ++ ++ C GP ++ GK
Sbjct: 865 ANPLYCDCHLRWLSSWVKTGYKEPGIAR--CAGPQDMEGK 902
>sp|P70193|LRIG1_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 1
OS=Mus musculus GN=Lrig1 PE=2 SV=2
Length = 1091
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 183/432 (42%), Gaps = 77/432 (17%)
Query: 26 TLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELP 85
+L C + + LP D +P R ++L N+LS + AF L L E+ L N L+ +P
Sbjct: 53 SLDCSGRGLATLPRD--LPSWTRSLNLSYNRLSEIDSAAFEDLTNLQEVYLNSNELTAIP 110
Query: 86 -----------------------GKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVV 122
G S ++L +DLS N I + S+ F +R+ +
Sbjct: 111 SLGAASIGVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIREL 170
Query: 123 QLSYNAIESLPANVFHD------------------------LISLEELDLSQNVLTSIQY 158
L+ N I L + F L L +LDL++N + I+
Sbjct: 171 NLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAFKLPRLTQLDLNRNRIRLIEG 230
Query: 159 GTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFL 218
TF G+ SL+ L+LQ N I++L G F L + L L N L + G L L
Sbjct: 231 LTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQL 290
Query: 219 ELSENWISSLNGD-------------EFSQLTSLKELHLGQ-----------NYIETIPA 254
LS N IS + D F+ LT L E L + N I I
Sbjct: 291 HLSNNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAE 350
Query: 255 GSFANLQSLEKLFLYSNNIQ---ELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHL 311
G+F L+SL L L N I E +G F GL NL+ L L N ++ + +AF + L
Sbjct: 351 GAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESL 410
Query: 312 KKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPT 371
+ L L N ++ + D+ + + NL L ++ + CDC + ++ WL + + + T
Sbjct: 411 EHLNLGENAIRSVQFDAFAKMKNLKELYISSESFLCDCQLKWLPPWLMGRMLQAFVTA-T 469
Query: 372 CRGPGNLGGKSV 383
C P +L G+S+
Sbjct: 470 CAHPESLKGQSI 481
>sp|Q9Z1P4|LGR5_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 5 OS=Mus
musculus GN=Lgr5 PE=2 SV=2
Length = 907
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 139/262 (53%), Gaps = 10/262 (3%)
Query: 83 ELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLIS 142
EL G++ + ++ S + LS+ LPS ++ + + LS N I LPA++ H L
Sbjct: 41 ELDGRMLLR-VDCSDLGLSE-----LPSNL---SVFTSYLDLSMNNISQLPASLLHRLCF 91
Query: 143 LEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLS 202
LEEL L+ N LT I G F+G++SLK L LQ+N++ Q+P +L+ L L L N +S
Sbjct: 92 LEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHIS 151
Query: 203 FIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQS 262
++ P F+ L L L +N ++ + F L++L+ + L N I I +F NL S
Sbjct: 152 YVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSS 211
Query: 263 LEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQ 322
L L L++N I L F GL +L L LN N L T A + + +LK+L SN ++
Sbjct: 212 LVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSNNIR 270
Query: 323 YLATDSLSLLPNLITLKLAKNP 344
+ + P+LIT+ NP
Sbjct: 271 SIPERAFVGNPSLITIHFYDNP 292
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 141/315 (44%), Gaps = 24/315 (7%)
Query: 3 KSDKEDSWYRCCEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSK 62
S D+ R C C C EL ++ VD DLG+++L + +
Sbjct: 23 SSPGPDAIPRGCPSHCHC---------------ELDGRMLLRVDCS--DLGLSELPS-NL 64
Query: 63 DAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVV 122
FT + L L N++S+LP L L + L+ N + +P F G L V+
Sbjct: 65 SVFT-----SYLDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLHSLKVL 119
Query: 123 QLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPP 182
L N + +P +L SL+ L L N ++ + FSG++SL+ L L N + +P
Sbjct: 120 MLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPV 179
Query: 183 GIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKEL 242
F L L ++L N++ I F L L L N I SL F L SL+ L
Sbjct: 180 QAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETL 239
Query: 243 HLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDT 302
L N ++ P + L +L++L +SNNI+ + F G +L + +N ++++
Sbjct: 240 DLNYNNLDEFPT-AIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGV 298
Query: 303 KAFEPMLHLKKLQLD 317
AF+ + L+ L L+
Sbjct: 299 SAFQHLPELRTLTLN 313
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 123/290 (42%), Gaps = 26/290 (8%)
Query: 47 IRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIK 106
++ + L N +S + F+GL+ L L L N L+++P + F S L M L+ N I
Sbjct: 140 LQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIH 199
Query: 107 TLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYS 166
+ F L V+ L N I SL F L SLE LDL+ N L + +
Sbjct: 200 HIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTA-IKTLSN 258
Query: 167 LKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNY--------------- 211
LK L SN I +P F L + +N + F+ F +
Sbjct: 259 LKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHI 318
Query: 212 --FKHLT------FLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSL 263
F HLT L L+ ISSL QL +L+ L L N +E +P S + Q L
Sbjct: 319 TEFPHLTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLLEDLP--SLSGCQKL 376
Query: 264 EKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKK 313
+K+ L N I E+ TF L NL +L L N + + AF + L K
Sbjct: 377 QKIDLRHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIK 426
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 170 LKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLN 229
L L N I+QLP + L +L+ L L N L+ I G
Sbjct: 71 LDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKG---------------------- 108
Query: 230 GDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTA 289
F+ L SLK L L N + +P + NL+SL+ L L +N+I + F+GL +L
Sbjct: 109 --AFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRH 166
Query: 290 LFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWH 346
L+L++N L + +AF + L+ + L NK+ ++A + L +L+ L L N H
Sbjct: 167 LWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIH 223
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 65 FTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQL 124
TG L L L +S LP + NL +DLS NL++ LPS G +L + L
Sbjct: 324 LTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLLEDLPS--LSGCQKLQKIDL 381
Query: 125 SYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFS---------------------G 163
+N I + + F L +L L+L+ N + I FS G
Sbjct: 382 RHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTG 441
Query: 164 MYSLKRLKLQSNRINQ--LPPGIFDDLKYLDFLS 195
++ L LKL NR Q +P F +LK ++ S
Sbjct: 442 LHGLTHLKLTGNRALQSLIPSANFPELKIIEMPS 475
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,793,424
Number of Sequences: 539616
Number of extensions: 6016158
Number of successful extensions: 23597
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 342
Number of HSP's that attempted gapping in prelim test: 13190
Number of HSP's gapped (non-prelim): 4312
length of query: 404
length of database: 191,569,459
effective HSP length: 120
effective length of query: 284
effective length of database: 126,815,539
effective search space: 36015613076
effective search space used: 36015613076
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)