Query psy12291
Match_columns 404
No_of_seqs 335 out of 3822
Neff 10.6
Searched_HMMs 46136
Date Fri Aug 16 23:34:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12291.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12291hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4194|consensus 100.0 1.6E-50 3.4E-55 362.4 8.1 374 23-397 103-503 (873)
2 KOG4237|consensus 100.0 6.4E-45 1.4E-49 312.3 1.2 370 11-397 34-408 (498)
3 KOG4194|consensus 100.0 1.1E-41 2.4E-46 305.8 6.3 329 13-344 45-376 (873)
4 PLN00113 leucine-rich repeat r 100.0 6.4E-33 1.4E-37 287.4 24.8 323 22-346 69-417 (968)
5 PLN00113 leucine-rich repeat r 100.0 3.1E-32 6.7E-37 282.3 23.0 321 23-345 119-464 (968)
6 KOG0472|consensus 99.9 1.3E-30 2.7E-35 225.1 -6.8 311 26-346 141-541 (565)
7 KOG0444|consensus 99.9 6.2E-30 1.3E-34 232.5 -5.8 321 15-345 25-374 (1255)
8 KOG0444|consensus 99.9 4.9E-30 1.1E-34 233.1 -7.9 289 24-320 9-302 (1255)
9 KOG4237|consensus 99.9 8.2E-28 1.8E-32 207.3 -1.9 131 22-152 67-199 (498)
10 PRK15387 E3 ubiquitin-protein 99.9 1E-23 2.2E-28 205.1 19.0 260 24-326 203-462 (788)
11 KOG0472|consensus 99.9 1.4E-27 3.1E-32 206.3 -7.9 293 25-327 163-545 (565)
12 PRK15387 E3 ubiquitin-protein 99.9 3.4E-23 7.4E-28 201.4 18.9 258 46-347 202-459 (788)
13 KOG0618|consensus 99.9 6.8E-25 1.5E-29 207.9 -3.9 288 49-345 182-488 (1081)
14 PLN03210 Resistant to P. syrin 99.9 2.2E-20 4.8E-25 194.7 26.5 302 23-344 590-904 (1153)
15 PRK15370 E3 ubiquitin-protein 99.9 2.6E-21 5.7E-26 189.4 14.5 249 69-347 178-429 (754)
16 KOG0618|consensus 99.9 7.7E-24 1.7E-28 200.8 -3.6 309 24-343 201-510 (1081)
17 PRK15370 E3 ubiquitin-protein 99.9 9.2E-21 2E-25 185.6 15.7 246 24-298 180-428 (754)
18 PLN03210 Resistant to P. syrin 99.8 5.4E-19 1.2E-23 184.5 24.7 281 43-344 587-880 (1153)
19 cd00116 LRR_RI Leucine-rich re 99.7 8.9E-20 1.9E-24 165.9 -1.3 276 49-345 2-319 (319)
20 cd00116 LRR_RI Leucine-rich re 99.7 7.5E-19 1.6E-23 159.8 -0.7 255 46-320 24-318 (319)
21 KOG0617|consensus 99.6 2E-17 4.2E-22 127.7 -4.9 131 67-201 31-162 (264)
22 KOG0617|consensus 99.6 2.5E-17 5.4E-22 127.1 -6.0 159 43-207 31-191 (264)
23 PF14580 LRR_9: Leucine-rich r 99.4 4.6E-13 9.9E-18 107.9 5.8 111 234-348 16-128 (175)
24 PF14580 LRR_9: Leucine-rich r 99.4 3.2E-13 7E-18 108.7 3.7 127 211-341 17-148 (175)
25 KOG1259|consensus 99.3 2.4E-13 5.2E-18 114.6 0.9 200 139-347 212-413 (490)
26 KOG3207|consensus 99.3 4.2E-13 9E-18 118.6 -0.5 213 114-326 118-343 (505)
27 KOG1259|consensus 99.2 1.4E-12 3.1E-17 110.0 1.1 227 92-327 181-417 (490)
28 KOG0531|consensus 99.2 8.7E-13 1.9E-17 123.7 -1.4 266 43-323 47-319 (414)
29 KOG3207|consensus 99.2 2E-12 4.3E-17 114.3 -0.3 210 67-276 119-341 (505)
30 KOG1909|consensus 99.2 1.4E-12 3.1E-17 112.1 -1.2 133 213-345 157-310 (382)
31 KOG0531|consensus 99.2 2E-12 4.4E-17 121.2 -1.1 263 70-347 50-319 (414)
32 KOG1909|consensus 99.2 1.3E-12 2.9E-17 112.3 -2.6 89 233-321 209-310 (382)
33 COG4886 Leucine-rich repeat (L 99.2 5.7E-11 1.2E-15 111.2 7.1 199 73-280 97-296 (394)
34 COG4886 Leucine-rich repeat (L 99.2 5.2E-11 1.1E-15 111.5 6.6 197 97-302 97-294 (394)
35 KOG0532|consensus 99.1 1.8E-12 3.8E-17 118.3 -4.1 168 169-345 79-246 (722)
36 KOG4658|consensus 99.1 3.3E-11 7.2E-16 120.8 4.5 139 32-175 511-652 (889)
37 PF13855 LRR_8: Leucine rich r 99.1 3.8E-11 8.2E-16 79.7 3.1 59 262-320 2-60 (61)
38 PF13855 LRR_8: Leucine rich r 99.1 5.9E-11 1.3E-15 78.8 3.1 61 285-345 1-61 (61)
39 TIGR00864 PCC polycystin catio 99.1 1E-10 2.3E-15 124.7 5.7 83 315-397 1-85 (2740)
40 KOG4658|consensus 99.1 1.2E-10 2.5E-15 117.0 4.8 288 24-318 525-828 (889)
41 KOG1859|consensus 99.0 2.6E-12 5.7E-17 120.3 -8.3 129 214-348 165-294 (1096)
42 KOG0532|consensus 99.0 1.8E-11 3.8E-16 111.9 -4.8 173 71-252 77-249 (722)
43 PLN03150 hypothetical protein; 98.9 4.1E-09 8.9E-14 103.5 8.4 112 238-349 419-531 (623)
44 PF13306 LRR_5: Leucine rich r 98.8 1.4E-08 3E-13 79.0 7.7 126 60-191 3-128 (129)
45 PLN03150 hypothetical protein; 98.8 2.6E-08 5.7E-13 97.9 10.8 122 23-151 403-525 (623)
46 PF13306 LRR_5: Leucine rich r 98.7 3.6E-08 7.8E-13 76.7 7.1 124 84-213 3-126 (129)
47 KOG1859|consensus 98.7 3E-10 6.5E-15 106.9 -7.6 178 139-326 107-296 (1096)
48 smart00082 LRRCT Leucine rich 98.6 2.7E-08 5.8E-13 63.2 2.0 49 343-392 1-50 (51)
49 KOG1644|consensus 98.6 1.5E-07 3.1E-12 75.6 5.9 104 93-198 42-149 (233)
50 KOG4579|consensus 98.5 3.6E-09 7.8E-14 79.2 -3.6 134 214-350 28-163 (177)
51 KOG2982|consensus 98.5 2.9E-08 6.3E-13 84.2 1.0 223 69-292 45-286 (418)
52 KOG1644|consensus 98.5 2E-07 4.3E-12 74.8 5.5 105 238-344 43-151 (233)
53 KOG2982|consensus 98.3 1.6E-07 3.4E-12 79.9 0.2 223 119-341 47-287 (418)
54 COG5238 RNA1 Ran GTPase-activa 98.2 1.3E-07 2.8E-12 79.4 -1.8 218 46-274 31-285 (388)
55 KOG2120|consensus 98.2 2.2E-08 4.7E-13 85.0 -6.9 85 94-178 186-273 (419)
56 KOG2120|consensus 98.2 5.7E-09 1.2E-13 88.4 -10.6 152 24-175 138-296 (419)
57 PF12799 LRR_4: Leucine Rich r 98.2 2E-06 4.3E-11 52.2 3.0 38 286-324 2-39 (44)
58 COG5238 RNA1 Ran GTPase-activa 98.1 8.5E-07 1.8E-11 74.6 1.2 234 115-348 28-318 (388)
59 PF12799 LRR_4: Leucine Rich r 98.1 2.5E-06 5.4E-11 51.7 2.9 38 70-108 2-39 (44)
60 KOG4579|consensus 98.1 6E-08 1.3E-12 72.8 -5.1 109 71-181 29-139 (177)
61 PRK15386 type III secretion pr 97.9 0.00011 2.5E-09 67.0 10.8 133 139-296 50-188 (426)
62 PRK15386 type III secretion pr 97.9 0.00016 3.4E-09 66.1 10.9 136 91-247 50-187 (426)
63 KOG3665|consensus 97.8 8.5E-06 1.9E-10 80.4 1.8 109 140-250 147-263 (699)
64 KOG3665|consensus 97.8 7.1E-06 1.5E-10 81.0 1.2 82 165-248 122-206 (699)
65 KOG2123|consensus 97.8 1.1E-06 2.4E-11 74.1 -4.3 82 237-322 19-101 (388)
66 KOG2739|consensus 97.7 1.9E-05 4.1E-10 66.4 1.6 39 285-323 91-130 (260)
67 KOG4341|consensus 97.5 2E-06 4.4E-11 76.6 -6.7 285 70-356 139-449 (483)
68 KOG2123|consensus 97.4 5.5E-06 1.2E-10 70.0 -5.3 82 260-345 18-100 (388)
69 KOG2739|consensus 97.4 8.5E-05 1.8E-09 62.6 1.7 105 186-292 40-150 (260)
70 KOG4341|consensus 97.1 1.4E-05 3E-10 71.5 -6.2 292 46-338 139-457 (483)
71 KOG1947|consensus 96.4 0.00018 3.9E-09 69.4 -4.6 35 311-345 403-439 (482)
72 PF01462 LRRNT: Leucine rich r 96.1 0.0058 1.3E-07 32.7 2.4 25 14-40 2-26 (28)
73 smart00013 LRRNT Leucine rich 96.0 0.011 2.4E-07 33.1 3.2 30 13-46 1-30 (33)
74 KOG1947|consensus 95.9 0.00032 7E-09 67.6 -5.4 34 287-320 403-438 (482)
75 PF00560 LRR_1: Leucine Rich R 95.8 0.0031 6.7E-08 31.6 0.4 16 95-110 2-17 (22)
76 PF01463 LRRCT: Leucine rich r 95.5 0.004 8.6E-08 32.4 0.0 23 370-393 2-25 (25)
77 PF00560 LRR_1: Leucine Rich R 95.3 0.0079 1.7E-07 30.1 0.8 17 71-87 2-18 (22)
78 PF13504 LRR_7: Leucine rich r 95.0 0.014 3.1E-07 27.1 1.2 11 95-105 3-13 (17)
79 PF13504 LRR_7: Leucine rich r 95.0 0.017 3.6E-07 26.8 1.4 15 310-324 2-16 (17)
80 smart00369 LRR_TYP Leucine-ric 95.0 0.022 4.8E-07 29.8 2.1 20 94-113 3-22 (26)
81 smart00370 LRR Leucine-rich re 95.0 0.022 4.8E-07 29.8 2.1 20 94-113 3-22 (26)
82 KOG3864|consensus 94.7 0.0071 1.5E-07 49.3 -0.6 92 36-127 92-186 (221)
83 smart00370 LRR Leucine-rich re 94.7 0.029 6.2E-07 29.4 2.0 23 68-90 1-23 (26)
84 smart00369 LRR_TYP Leucine-ric 94.7 0.029 6.2E-07 29.4 2.0 23 68-90 1-23 (26)
85 KOG3864|consensus 94.0 0.0052 1.1E-07 50.0 -2.6 33 310-342 152-185 (221)
86 KOG4308|consensus 91.6 0.00081 1.8E-08 63.7 -12.1 61 263-323 235-304 (478)
87 KOG4308|consensus 90.8 0.0028 6.1E-08 60.1 -9.3 183 143-345 89-302 (478)
88 KOG0473|consensus 90.1 0.0043 9.4E-08 51.6 -7.5 85 65-152 38-122 (326)
89 KOG0473|consensus 87.6 0.012 2.6E-07 49.0 -6.5 92 251-345 32-123 (326)
90 smart00365 LRR_SD22 Leucine-ri 86.1 0.55 1.2E-05 24.5 1.5 15 286-300 3-17 (26)
91 PF13516 LRR_6: Leucine Rich r 84.4 0.26 5.7E-06 25.0 -0.3 11 287-297 4-14 (24)
92 KOG3763|consensus 83.9 0.5 1.1E-05 44.8 1.2 12 334-345 271-282 (585)
93 smart00364 LRR_BAC Leucine-ric 82.7 0.93 2E-05 23.6 1.4 18 309-326 2-19 (26)
94 KOG3763|consensus 76.4 1.1 2.4E-05 42.6 0.8 63 235-298 216-283 (585)
95 smart00368 LRR_RI Leucine rich 70.1 3.8 8.3E-05 21.7 1.7 13 310-322 3-15 (28)
96 TIGR00864 PCC polycystin catio 47.7 12 0.00026 43.3 2.1 33 267-299 1-33 (2740)
97 PF05725 FNIP: FNIP Repeat; I 43.1 40 0.00086 20.0 3.1 34 42-77 9-42 (44)
98 smart00367 LRR_CC Leucine-rich 42.7 16 0.00034 18.8 1.1 11 309-319 2-12 (26)
99 PF08576 DUF1764: Eukaryotic p 21.1 40 0.00088 24.6 0.5 8 342-349 93-100 (102)
100 KOG4242|consensus 20.2 5.4E+02 0.012 24.9 7.5 227 69-297 214-480 (553)
No 1
>KOG4194|consensus
Probab=100.00 E-value=1.6e-50 Score=362.42 Aligned_cols=374 Identities=32% Similarity=0.489 Sum_probs=299.3
Q ss_pred CCceEEecCCCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCC
Q psy12291 23 EIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQ 102 (404)
Q Consensus 23 ~~~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~ 102 (404)
..+.++...+.++.||...-...+++.|++.+|.|+.+....++.++.|+.|||+.|.|++++...|..-.++++|+|++
T Consensus 103 nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~ 182 (873)
T KOG4194|consen 103 NLQEVNLNKNELTRIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLAS 182 (873)
T ss_pred cceeeeeccchhhhcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecc
Confidence 45677777788888888877777899999999999999999999999999999999999999988888878899999999
Q ss_pred CCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCC
Q psy12291 103 NLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPP 182 (404)
Q Consensus 103 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~ 182 (404)
|.|+.+..+.|.++.+|..|.|+.|.++.+|...|..+++|+.|+|..|.+..+....|.++++|+.|.+..|.+..+.+
T Consensus 183 N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~D 262 (873)
T KOG4194|consen 183 NRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDD 262 (873)
T ss_pred ccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccC
Confidence 99999988889999999999999999999998888889999999999988888777788888888888888888888888
Q ss_pred CccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccCCCC
Q psy12291 183 GIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQS 262 (404)
Q Consensus 183 ~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~ 262 (404)
++|..+.+++.|++..|+++.+..+++.+++.|+.|+++.|.+..+..+.+...++|+.|+++.|+++.++++.|..+..
T Consensus 263 G~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~ 342 (873)
T KOG4194|consen 263 GAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQ 342 (873)
T ss_pred cceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHH
Confidence 88888888888888888888777777777888888888888777777667777777788888877777777777777777
Q ss_pred CcEEECcCCCccccccccccCCCCCCeeeccccccccc---CccccCCCCCCcEEeCCCCCCcccCcccccCCCCCcEEE
Q psy12291 263 LEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYL---DTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLK 339 (404)
Q Consensus 263 L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~---~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~ 339 (404)
|++|.|+.|.+..+...+|.++.+|++|||++|.+... ...+|..+++|+.|++.+|+++.++..++..+++|++|+
T Consensus 343 Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~Ld 422 (873)
T KOG4194|consen 343 LEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLD 422 (873)
T ss_pred hhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceec
Confidence 77777777777666666666666666666666665432 124555666666666666666666666666666666666
Q ss_pred ccCCc-----------------------cccccCcHHHHHHHHhccCcccCCCCeeCCCCCCCCCcccCCCCcCC-CCcc
Q psy12291 340 LAKNP-----------------------WHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMSFDDL-CEGQ 395 (404)
Q Consensus 340 l~~Np-----------------------~~C~c~~~~~~~~~~~~~~~~~~~~~~C~~p~~l~~~~l~~~~~~~~-C~~~ 395 (404)
|.+|+ +.|||++.|+.+|+...... -.....|++|+.+.|+.+.+++..++ |+..
T Consensus 423 L~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql~Wl~qWl~~~~lq-~sv~a~CayPe~Lad~~i~svd~~~lvC~Ds 501 (873)
T KOG4194|consen 423 LGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQLKWLAQWLYRRKLQ-SSVIAKCAYPEPLADQSIVSVDTANLVCDDS 501 (873)
T ss_pred CCCCcceeecccccccchhhhhhhcccceEEeccHHHHHHHHHhcccc-cceeeeccCCcccccceeEeechhhceecCC
Confidence 66664 48999999999999876543 12368999999999999999999887 9865
Q ss_pred cc
Q psy12291 396 WA 397 (404)
Q Consensus 396 ~~ 397 (404)
+-
T Consensus 502 pk 503 (873)
T KOG4194|consen 502 PK 503 (873)
T ss_pred CC
Confidence 43
No 2
>KOG4237|consensus
Probab=100.00 E-value=6.4e-45 Score=312.34 Aligned_cols=370 Identities=29% Similarity=0.462 Sum_probs=301.2
Q ss_pred CCCCCCCceecC-CCceEEecCCCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccc
Q psy12291 11 YRCCEGPCRCRP-EIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLF 89 (404)
Q Consensus 11 ~~~~~~~c~c~~-~~~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~ 89 (404)
...||..|.|.. +...|+|++++++++|.+ +|.+.+.+++..|.|+.+++.+|..+++|+.|||++|+|+.|.+++|
T Consensus 34 ~~~CP~pC~Cs~~~g~~VdCr~~GL~eVP~~--LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF 111 (498)
T KOG4237|consen 34 ASACPAPCTCSDVEGGIVDCRGKGLTEVPAN--LPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAF 111 (498)
T ss_pred cccCCCCcccCCCCCceEEccCCCcccCccc--CCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhh
Confidence 348999999985 467899999999999998 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCEEeCCC-CCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCc
Q psy12291 90 ISTINLSTMDLSQ-NLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLK 168 (404)
Q Consensus 90 ~~~~~L~~L~l~~-n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~ 168 (404)
.+++.|..|.+.+ |+|+.++.+.|.++..++.|.+.-|.+..+..+.|..++++..|.+..|.+..+....|..+..++
T Consensus 112 ~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~ 191 (498)
T KOG4237|consen 112 KGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIK 191 (498)
T ss_pred hhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccc
Confidence 9999988887777 899999999999999999999999999999988999999999999999999998888899888999
Q ss_pred EEeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCC-CCCc-EEECCC
Q psy12291 169 RLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQL-TSLK-ELHLGQ 246 (404)
Q Consensus 169 ~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l-~~L~-~L~l~~ 246 (404)
.+.+..|.+.. ..+++.+....- ..+..++......-..+...++..+....|... ..+. .+.-..
T Consensus 192 tlhlA~np~ic-----dCnL~wla~~~a-------~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d 259 (498)
T KOG4237|consen 192 TLHLAQNPFIC-----DCNLPWLADDLA-------MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSED 259 (498)
T ss_pred hHhhhcCcccc-----ccccchhhhHHh-------hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhcccc
Confidence 88887775321 112222211111 111122222223333333444444444333322 1111 122222
Q ss_pred CCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCc
Q psy12291 247 NYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLAT 326 (404)
Q Consensus 247 ~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 326 (404)
+.....|...|..+++|++|+|++|+|+.|...+|.+...+++|.|..|+|..+...+|.++..|+.|+|.+|+|+.+.+
T Consensus 260 ~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~ 339 (498)
T KOG4237|consen 260 FPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP 339 (498)
T ss_pred CcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec
Confidence 23334455668899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcEEEccCCccccccCcHHHHHHHHhccCcccCCCCeeCCCCCCCCCcccCCCCcCC-CCcccc
Q psy12291 327 DSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMSFDDL-CEGQWA 397 (404)
Q Consensus 327 ~~~~~l~~L~~l~l~~Np~~C~c~~~~~~~~~~~~~~~~~~~~~~C~~p~~l~~~~l~~~~~~~~-C~~~~~ 397 (404)
..|..+.+|.+|+|-+|||.|||.+.|+.+|+++.. ..+...|+.|..+++.++.++...+. |+++.+
T Consensus 340 ~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~---~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee 408 (498)
T KOG4237|consen 340 GAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKS---VVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEE 408 (498)
T ss_pred ccccccceeeeeehccCcccCccchHHHHHHHhhCC---CCCCCCCCCCchhccccchhccccccccCCccc
Confidence 999999999999999999999999999999999987 23589999999999999999998887 885443
No 3
>KOG4194|consensus
Probab=100.00 E-value=1.1e-41 Score=305.82 Aligned_cols=329 Identities=30% Similarity=0.462 Sum_probs=206.0
Q ss_pred CCCCCceecCCCceEEecCCCCCccCC---CCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccc
Q psy12291 13 CCEGPCRCRPEIHTLSCWKQDMEELPF---DQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLF 89 (404)
Q Consensus 13 ~~~~~c~c~~~~~~~~~~~~~l~~ip~---~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~ 89 (404)
.||..|.|.. ..++|++..++.+.. .+++|...+.||+++|.+..+....|.++++|+++++..|.++.||...
T Consensus 45 ~cpa~c~c~~--~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~- 121 (873)
T KOG4194|consen 45 ECPATCPCNT--RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFG- 121 (873)
T ss_pred cCCCcCCCCc--eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhccccc-
Confidence 5788898874 679999999998621 2348889999999999999999999999999999999999999888643
Q ss_pred cCCCCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcE
Q psy12291 90 ISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKR 169 (404)
Q Consensus 90 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~ 169 (404)
....+|+.|+|.+|.|+++....++.++.|+.|+|+.|.++.++...|..-.++++|+|++|.|+.+....|.++.+|..
T Consensus 122 ~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~t 201 (873)
T KOG4194|consen 122 HESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLT 201 (873)
T ss_pred ccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchhee
Confidence 34455777777777777766666666666777777777666666666665566666777666666666666666666666
Q ss_pred EeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCC
Q psy12291 170 LKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYI 249 (404)
Q Consensus 170 L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l 249 (404)
|.++.|+++.+|...|.++++|+.|++..|++..+....|.++++|+.|.+..|.+......+|..+.++++|++..|++
T Consensus 202 lkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l 281 (873)
T KOG4194|consen 202 LKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRL 281 (873)
T ss_pred eecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchh
Confidence 66666666666666666666666666666655544334444555555555555544444444444444444444444444
Q ss_pred cccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCcccc
Q psy12291 250 ETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSL 329 (404)
Q Consensus 250 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 329 (404)
..+..+++..+++|+.|++++|.|..+..+....+++|++|+|++|+|+.++++.|..+..|++|.|++|++..+....|
T Consensus 282 ~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af 361 (873)
T KOG4194|consen 282 QAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAF 361 (873)
T ss_pred hhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHH
Confidence 44444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred cCCCCCcEEEccCCc
Q psy12291 330 SLLPNLITLKLAKNP 344 (404)
Q Consensus 330 ~~l~~L~~l~l~~Np 344 (404)
..+++|+.|||+.|.
T Consensus 362 ~~lssL~~LdLr~N~ 376 (873)
T KOG4194|consen 362 VGLSSLHKLDLRSNE 376 (873)
T ss_pred HHhhhhhhhcCcCCe
Confidence 444444444444443
No 4
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.4e-33 Score=287.43 Aligned_cols=323 Identities=26% Similarity=0.240 Sum_probs=183.3
Q ss_pred CCCceEEecCCCCCccCC-CCCCCCCeeEEEcCCCCCc-ccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEe
Q psy12291 22 PEIHTLSCWKQDMEELPF-DQIIPVDIRVIDLGINQLS-TLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMD 99 (404)
Q Consensus 22 ~~~~~~~~~~~~l~~ip~-~~~~~~~l~~L~l~~~~i~-~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~ 99 (404)
+....++..++++..... .....+.++.|++++|++. .++...+.++++|++|++++|.+.+..+. ..+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 346677777776654332 2222356888888888876 34444455777788888877776632221 3456677777
Q ss_pred CCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCC
Q psy12291 100 LSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQ 179 (404)
Q Consensus 100 l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~ 179 (404)
+++|.+....+..+..+++|++|++++|.+....+..+.++++|++|++++|.+....+..+.++++|+.|++++|.+..
T Consensus 147 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 226 (968)
T PLN00113 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSG 226 (968)
T ss_pred CcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCC
Confidence 77776654333346666677777777666654444445566666666666666655555556666666666666666654
Q ss_pred CCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccC
Q psy12291 180 LPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFAN 259 (404)
Q Consensus 180 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~ 259 (404)
..+..+..+++|++|++++|.+....+..+..+++|++|++++|.+.+..+..+..+++|++|++++|.+....+..+..
T Consensus 227 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 306 (968)
T PLN00113 227 EIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQ 306 (968)
T ss_pred cCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcC
Confidence 44444556666666666666655544555555556666666655555444445555555555555555554433334445
Q ss_pred CCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCC--------------------
Q psy12291 260 LQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSN-------------------- 319 (404)
Q Consensus 260 l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n-------------------- 319 (404)
+++|+.|++++|.+....+..+..+++|+.|++++|.++...+..+..+++|+.|++++|
T Consensus 307 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~ 386 (968)
T PLN00113 307 LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLI 386 (968)
T ss_pred CCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEE
Confidence 555555555555555444444444555555555555544433334444444444444444
Q ss_pred ----CCcccCcccccCCCCCcEEEccCCccc
Q psy12291 320 ----KLQYLATDSLSLLPNLITLKLAKNPWH 346 (404)
Q Consensus 320 ----~l~~~~~~~~~~l~~L~~l~l~~Np~~ 346 (404)
.+.+..+..+..+++|+.|++++|++.
T Consensus 387 l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~ 417 (968)
T PLN00113 387 LFSNSLEGEIPKSLGACRSLRRVRLQDNSFS 417 (968)
T ss_pred CcCCEecccCCHHHhCCCCCCEEECcCCEee
Confidence 444444444555566666666666553
No 5
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.1e-32 Score=282.33 Aligned_cols=321 Identities=22% Similarity=0.193 Sum_probs=212.4
Q ss_pred CCceEEecCCCCCc-cCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCC
Q psy12291 23 EIHTLSCWKQDMEE-LPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLS 101 (404)
Q Consensus 23 ~~~~~~~~~~~l~~-ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~ 101 (404)
..+.++..++++.. +|.. ...++++|++++|.+....+..+.++++|++|++++|.+....+..|.++++|++|+++
T Consensus 119 ~L~~L~Ls~n~l~~~~p~~--~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 196 (968)
T PLN00113 119 SLRYLNLSNNNFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLA 196 (968)
T ss_pred CCCEEECcCCccccccCcc--ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeecc
Confidence 46678888887764 4432 34579999999998887777778889999999999998876555567888889999998
Q ss_pred CCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCC
Q psy12291 102 QNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLP 181 (404)
Q Consensus 102 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~ 181 (404)
+|.+....+..+..+++|++|++++|.+....+..+.++++|++|++++|.+....+..+.++++|+.|++++|.+.+..
T Consensus 197 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 276 (968)
T PLN00113 197 SNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPI 276 (968)
T ss_pred CCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccC
Confidence 88877554445778888888888888877555555677788888888888777666667777777777777777776554
Q ss_pred CCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccCCC
Q psy12291 182 PGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQ 261 (404)
Q Consensus 182 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~ 261 (404)
+..+..+++|+.|++++|.+....+..+..+++|+.|++++|.+....+..+..+++|+.|++++|.+....+..+..++
T Consensus 277 p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~ 356 (968)
T PLN00113 277 PPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHN 356 (968)
T ss_pred chhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCC
Confidence 45556667777777777766655555566666666666666666655555566666666666666665533333445555
Q ss_pred CCcEEECcCCCccc------------------------cccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCC
Q psy12291 262 SLEKLFLYSNNIQE------------------------LHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLD 317 (404)
Q Consensus 262 ~L~~L~L~~n~l~~------------------------~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 317 (404)
+|+.|++++|.+.. ..+..+..+++|+.|++++|+++...+..+..++.|+.|+++
T Consensus 357 ~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 436 (968)
T PLN00113 357 NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDIS 436 (968)
T ss_pred CCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECc
Confidence 55555555555443 323334445555555555555554444455555556666666
Q ss_pred CCCCcccCcccccCCCCCcEEEccCCcc
Q psy12291 318 SNKLQYLATDSLSLLPNLITLKLAKNPW 345 (404)
Q Consensus 318 ~n~l~~~~~~~~~~l~~L~~l~l~~Np~ 345 (404)
+|.+.+..+..+..+++|+.|++++|.+
T Consensus 437 ~N~l~~~~~~~~~~l~~L~~L~L~~n~~ 464 (968)
T PLN00113 437 NNNLQGRINSRKWDMPSLQMLSLARNKF 464 (968)
T ss_pred CCcccCccChhhccCCCCcEEECcCcee
Confidence 6655554444444455555555555443
No 6
>KOG0472|consensus
Probab=99.95 E-value=1.3e-30 Score=225.10 Aligned_cols=311 Identities=31% Similarity=0.429 Sum_probs=223.9
Q ss_pred eEEecCCCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCCCC
Q psy12291 26 TLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLI 105 (404)
Q Consensus 26 ~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l 105 (404)
.++-..+++..+|.+.+....+..+++.+|+++..+++.+. |+.|++|+.-.|-++.+|+.. +.+.+|.-|++.+|++
T Consensus 141 dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tlP~~l-g~l~~L~~LyL~~Nki 218 (565)
T KOG0472|consen 141 DLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETLPPEL-GGLESLELLYLRRNKI 218 (565)
T ss_pred hhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcCChhh-cchhhhHHHHhhhccc
Confidence 34445667777777766666788888888888888877666 889999999999999998875 8889999999999999
Q ss_pred cccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCCCcc
Q psy12291 106 KTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIF 185 (404)
Q Consensus 106 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~ 185 (404)
..+|. |.++..|+++++..|.+..++......++++..||++.|++.+.+.+ +--+.+|+.||+++|.++.+|.. +
T Consensus 219 ~~lPe--f~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde-~clLrsL~rLDlSNN~is~Lp~s-L 294 (565)
T KOG0472|consen 219 RFLPE--FPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDE-ICLLRSLERLDLSNNDISSLPYS-L 294 (565)
T ss_pred ccCCC--CCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchH-HHHhhhhhhhcccCCccccCCcc-c
Confidence 99995 88999999999999999999988888899999999999999988754 44577899999999999998865 5
Q ss_pred CCCCCCCeEecCCCcCcccC--------------------------------------CCcc---CCCCCCCEEECCCCc
Q psy12291 186 DDLKYLDFLSLRNNRLSFIR--------------------------------------PGLF---NYFKHLTFLELSENW 224 (404)
Q Consensus 186 ~~l~~L~~L~l~~~~~~~~~--------------------------------------~~~~---~~l~~L~~L~l~~~~ 224 (404)
+++ +|+.|.+.||.+..+. +..+ ....+.+.|++++-+
T Consensus 295 gnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~q 373 (565)
T KOG0472|consen 295 GNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQ 373 (565)
T ss_pred ccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccc
Confidence 888 8999999998643110 0000 112234445555555
Q ss_pred CCCCChhhh-------------------------------------------------cCCCCCcEEECCCCCCcccCcc
Q psy12291 225 ISSLNGDEF-------------------------------------------------SQLTSLKELHLGQNYIETIPAG 255 (404)
Q Consensus 225 ~~~~~~~~~-------------------------------------------------~~l~~L~~L~l~~~~l~~~~~~ 255 (404)
++.+|...| +.+++|..|++++|.+.++|.+
T Consensus 374 lt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e 453 (565)
T KOG0472|consen 374 LTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLPEE 453 (565)
T ss_pred cccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhhcchh
Confidence 544443333 3334444444444444444442
Q ss_pred cccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCcccccCCCCC
Q psy12291 256 SFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNL 335 (404)
Q Consensus 256 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 335 (404)
+..+-.|+.|+++.|.+..++. ....+..++.+-.++|++..+++..+.++.+|..||+.+|.+..+|+ .++++.+|
T Consensus 454 -~~~lv~Lq~LnlS~NrFr~lP~-~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp-~LgnmtnL 530 (565)
T KOG0472|consen 454 -MGSLVRLQTLNLSFNRFRMLPE-CLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPP-ILGNMTNL 530 (565)
T ss_pred -hhhhhhhheecccccccccchH-HHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCCh-hhccccce
Confidence 2333344555555554444432 12222334444444566677777778889999999999999999987 58999999
Q ss_pred cEEEccCCccc
Q psy12291 336 ITLKLAKNPWH 346 (404)
Q Consensus 336 ~~l~l~~Np~~ 346 (404)
++|++.||||.
T Consensus 531 ~hLeL~gNpfr 541 (565)
T KOG0472|consen 531 RHLELDGNPFR 541 (565)
T ss_pred eEEEecCCccC
Confidence 99999999995
No 7
>KOG0444|consensus
Probab=99.94 E-value=6.2e-30 Score=232.47 Aligned_cols=321 Identities=28% Similarity=0.433 Sum_probs=211.7
Q ss_pred CCCceecCCCceEEecCCCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCc--ccCcccccCC
Q psy12291 15 EGPCRCRPEIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLS--ELPGKLFIST 92 (404)
Q Consensus 15 ~~~c~c~~~~~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~--~~~~~~~~~~ 92 (404)
|..-+.-...+.+.....++..+|........+++|.+++|++..+. +.+..++.|+.++++.|++. +||+++| .+
T Consensus 25 P~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~vh-GELs~Lp~LRsv~~R~N~LKnsGiP~diF-~l 102 (1255)
T KOG0444|consen 25 PHDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISVH-GELSDLPRLRSVIVRDNNLKNSGIPTDIF-RL 102 (1255)
T ss_pred chhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHhhh-hhhccchhhHHHhhhccccccCCCCchhc-cc
Confidence 33333334466777788888888877666667888888888876663 34677777777777777765 6777664 57
Q ss_pred CCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEec
Q psy12291 93 INLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKL 172 (404)
Q Consensus 93 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l 172 (404)
..|+.||||+|+++++|.. +....++-+|+|++|+|..||...|.++..|-.|++++|.+..+++. ...+..|+.|.+
T Consensus 103 ~dLt~lDLShNqL~EvP~~-LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ-~RRL~~LqtL~L 180 (1255)
T KOG0444|consen 103 KDLTILDLSHNQLREVPTN-LEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQ-IRRLSMLQTLKL 180 (1255)
T ss_pred ccceeeecchhhhhhcchh-hhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHH-HHHHhhhhhhhc
Confidence 7777788888877777765 56667777777777777777777777777777777777777666543 344556666666
Q ss_pred cCCCCCCCCCCc-------------------------cCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCC
Q psy12291 173 QSNRINQLPPGI-------------------------FDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISS 227 (404)
Q Consensus 173 ~~~~l~~~~~~~-------------------------~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 227 (404)
++|.+....-.. +..+.+|..++++.|.+..+ |+-+..+++|+.|++++|.++.
T Consensus 181 s~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~v-Pecly~l~~LrrLNLS~N~ite 259 (1255)
T KOG0444|consen 181 SNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIV-PECLYKLRNLRRLNLSGNKITE 259 (1255)
T ss_pred CCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcc-hHHHhhhhhhheeccCcCceee
Confidence 666544332222 23444455555555554433 2334445555666666665554
Q ss_pred CChhhhcCCCCCcEEECCCCCCcccCcccccCCCCCcEEECcCCCcc--ccccccccCCCCCCeeecccccccccCcccc
Q psy12291 228 LNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQ--ELHAGTFAGLTNLTALFLNNNLLRYLDTKAF 305 (404)
Q Consensus 228 ~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~ 305 (404)
... ......+|++|+++.|+++.+|. .+..+++|+.|.+.+|+++ +++ .-++.+..|+++..++|.+.-+ ++.+
T Consensus 260 L~~-~~~~W~~lEtLNlSrNQLt~LP~-avcKL~kL~kLy~n~NkL~FeGiP-SGIGKL~~Levf~aanN~LElV-PEgl 335 (1255)
T KOG0444|consen 260 LNM-TEGEWENLETLNLSRNQLTVLPD-AVCKLTKLTKLYANNNKLTFEGIP-SGIGKLIQLEVFHAANNKLELV-PEGL 335 (1255)
T ss_pred eec-cHHHHhhhhhhccccchhccchH-HHhhhHHHHHHHhccCcccccCCc-cchhhhhhhHHHHhhccccccC-chhh
Confidence 431 22334456666666666666655 4566667777777666554 343 3356667777777777777655 5667
Q ss_pred CCCCCCcEEeCCCCCCcccCcccccCCCCCcEEEccCCcc
Q psy12291 306 EPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPW 345 (404)
Q Consensus 306 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~Np~ 345 (404)
..|..|+.|.|+.|++.++|. .+.-++.|..||+..||-
T Consensus 336 cRC~kL~kL~L~~NrLiTLPe-aIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 336 CRCVKLQKLKLDHNRLITLPE-AIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred hhhHHHHHhcccccceeechh-hhhhcCCcceeeccCCcC
Confidence 788889999999999888865 577788999999999974
No 8
>KOG0444|consensus
Probab=99.94 E-value=4.9e-30 Score=233.14 Aligned_cols=289 Identities=26% Similarity=0.377 Sum_probs=199.3
Q ss_pred CceEEecCCCCC--ccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCC
Q psy12291 24 IHTLSCWKQDME--ELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLS 101 (404)
Q Consensus 24 ~~~~~~~~~~l~--~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~ 101 (404)
.++++.+++... ..|.+...-..++-|.+....+..++ ..++.+.+|++|.++.|++.++... ++.++.|+.+++.
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~vP-eEL~~lqkLEHLs~~HN~L~~vhGE-Ls~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQVP-EELSRLQKLEHLSMAHNQLISVHGE-LSDLPRLRSVIVR 86 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhCh-HHHHHHhhhhhhhhhhhhhHhhhhh-hccchhhHHHhhh
Confidence 566777777665 34544444456888889888887774 5689999999999999999988765 4889999999999
Q ss_pred CCCCc--ccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCC
Q psy12291 102 QNLIK--TLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQ 179 (404)
Q Consensus 102 ~n~l~--~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~ 179 (404)
+|+++ .||+..| .+.-|..|+|++|++..+|... ...+++-.|++++|+|..++...|.+++.|-.|++++|.+..
T Consensus 87 ~N~LKnsGiP~diF-~l~dLt~lDLShNqL~EvP~~L-E~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~ 164 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIF-RLKDLTILDLSHNQLREVPTNL-EYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEM 164 (1255)
T ss_pred ccccccCCCCchhc-ccccceeeecchhhhhhcchhh-hhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhh
Confidence 99876 6888865 6899999999999999998764 667899999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCC-CChhhhcCCCCCcEEECCCCCCcccCccccc
Q psy12291 180 LPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISS-LNGDEFSQLTSLKELHLGQNYIETIPAGSFA 258 (404)
Q Consensus 180 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~ 258 (404)
+|+.. ..+..|++|.+++|.+.-.....+..+++|++|.+++.+-+- -.|..+..+.+|..++++.|.+..+|. .+.
T Consensus 165 LPPQ~-RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vPe-cly 242 (1255)
T KOG0444|consen 165 LPPQI-RRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVPE-CLY 242 (1255)
T ss_pred cCHHH-HHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcchH-HHh
Confidence 99985 888999999999997654333333344455555555442221 112334444555555555555555444 344
Q ss_pred CCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCC
Q psy12291 259 NLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNK 320 (404)
Q Consensus 259 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 320 (404)
.+++|+.|+|++|+|+.+.. ..+...+|++|+++.|+++.+ +.++..++.|+.|.+.+|+
T Consensus 243 ~l~~LrrLNLS~N~iteL~~-~~~~W~~lEtLNlSrNQLt~L-P~avcKL~kL~kLy~n~Nk 302 (1255)
T KOG0444|consen 243 KLRNLRRLNLSGNKITELNM-TEGEWENLETLNLSRNQLTVL-PDAVCKLTKLTKLYANNNK 302 (1255)
T ss_pred hhhhhheeccCcCceeeeec-cHHHHhhhhhhccccchhccc-hHHHhhhHHHHHHHhccCc
Confidence 45555555555555554432 122234445555555555444 2233344444444444443
No 9
>KOG4237|consensus
Probab=99.93 E-value=8.2e-28 Score=207.34 Aligned_cols=131 Identities=27% Similarity=0.392 Sum_probs=119.0
Q ss_pred CCCceEEecCCCCCccCCCCCCC-CCeeEEEcCCCCCcccChhhcCCCCCCCEEEccC-CcCcccCcccccCCCCCCEEe
Q psy12291 22 PEIHTLSCWKQDMEELPFDQIIP-VDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRK-NHLSELPGKLFISTINLSTMD 99 (404)
Q Consensus 22 ~~~~~~~~~~~~l~~ip~~~~~~-~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~-~~l~~~~~~~~~~~~~L~~L~ 99 (404)
++...++...++|+.||...+-+ ..++.||+++|+|+.|.+++|.+++.|.+|.+.+ |+|++++.++|.++..|+-|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 45668999999999999986653 5799999999999999999999999998888776 899999999999999999999
Q ss_pred CCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCc
Q psy12291 100 LSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNV 152 (404)
Q Consensus 100 l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~ 152 (404)
+.-|++.-++..+|..++++..|.+.+|.+..+....|..+..++.+.+..|+
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np 199 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNP 199 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCc
Confidence 99999999999999999999999999999999998888888888888887766
No 10
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.92 E-value=1e-23 Score=205.12 Aligned_cols=260 Identities=24% Similarity=0.260 Sum_probs=190.7
Q ss_pred CceEEecCCCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCC
Q psy12291 24 IHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQN 103 (404)
Q Consensus 24 ~~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n 103 (404)
...++|.+++++.+|.. ++.+++.|++.+|+++.++. ..++|++|++++|+++.+|.. .++|++|++++|
T Consensus 203 ~~~LdLs~~~LtsLP~~--l~~~L~~L~L~~N~Lt~LP~----lp~~Lk~LdLs~N~LtsLP~l----p~sL~~L~Ls~N 272 (788)
T PRK15387 203 NAVLNVGESGLTTLPDC--LPAHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPVL----PPGLLELSIFSN 272 (788)
T ss_pred CcEEEcCCCCCCcCCcc--hhcCCCEEEccCCcCCCCCC----CCCCCcEEEecCCccCcccCc----ccccceeeccCC
Confidence 56799999999999975 66789999999999988753 257899999999999988752 468899999999
Q ss_pred CCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCCC
Q psy12291 104 LIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPG 183 (404)
Q Consensus 104 ~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~ 183 (404)
.++.+|.. +.+|+.|++++|.++.++. .+++|+.|++++|.+..++. + ..+|+.|++++|.++.+|..
T Consensus 273 ~L~~Lp~l----p~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~--l--p~~L~~L~Ls~N~L~~LP~l 340 (788)
T PRK15387 273 PLTHLPAL----PSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA--L--PSELCKLWAYNNQLTSLPTL 340 (788)
T ss_pred chhhhhhc----hhhcCEEECcCCccccccc----cccccceeECCCCccccCCC--C--cccccccccccCcccccccc
Confidence 98888752 3578889999999888765 24678999999998887653 1 23677888888888877641
Q ss_pred ccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccCCCCC
Q psy12291 184 IFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSL 263 (404)
Q Consensus 184 ~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L 263 (404)
..+|+.|++++|+++.++. ..++|+.|++++|.+..++. ...+|+.|++++|.+..+|.. .++|
T Consensus 341 ----p~~Lq~LdLS~N~Ls~LP~----lp~~L~~L~Ls~N~L~~LP~----l~~~L~~LdLs~N~Lt~LP~l----~s~L 404 (788)
T PRK15387 341 ----PSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTSLPVL----PSEL 404 (788)
T ss_pred ----ccccceEecCCCccCCCCC----CCcccceehhhccccccCcc----cccccceEEecCCcccCCCCc----ccCC
Confidence 2478888888888876643 13567777788877776552 124677788888877766641 2567
Q ss_pred cEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCc
Q psy12291 264 EKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLAT 326 (404)
Q Consensus 264 ~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 326 (404)
+.|++++|.++.++.. ..+|+.|++++|+++.++ ..+..+++|+.|+|++|++++...
T Consensus 405 ~~LdLS~N~LssIP~l----~~~L~~L~Ls~NqLt~LP-~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 405 KELMVSGNRLTSLPML----PSGLLSLSVYRNQLTRLP-ESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred CEEEccCCcCCCCCcc----hhhhhhhhhccCcccccC-hHHhhccCCCeEECCCCCCCchHH
Confidence 7777777777776531 246677777777777664 345567777777777777765443
No 11
>KOG0472|consensus
Probab=99.91 E-value=1.4e-27 Score=206.34 Aligned_cols=293 Identities=29% Similarity=0.445 Sum_probs=238.2
Q ss_pred ceEEecCCCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCCC
Q psy12291 25 HTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNL 104 (404)
Q Consensus 25 ~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~ 104 (404)
..++..++.++.+|.+...-..+++||...|-+..++++ ++++.+|..|+++.|+|..+|. |.++..|..|+++.|.
T Consensus 163 ~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~-lg~l~~L~~LyL~~Nki~~lPe--f~gcs~L~Elh~g~N~ 239 (565)
T KOG0472|consen 163 SKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPE-LGGLESLELLYLRRNKIRFLPE--FPGCSLLKELHVGENQ 239 (565)
T ss_pred HHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChh-hcchhhhHHHHhhhcccccCCC--CCccHHHHHHHhcccH
Confidence 345667888888887755555799999999999988765 8999999999999999999994 7999999999999999
Q ss_pred CcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCC----
Q psy12291 105 IKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQL---- 180 (404)
Q Consensus 105 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~---- 180 (404)
++.+|+....+++++.+|++.+|+++.+|... .-+.+|..||+++|.++..+ ..++++ .|+.|-+.+|.+..+
T Consensus 240 i~~lpae~~~~L~~l~vLDLRdNklke~Pde~-clLrsL~rLDlSNN~is~Lp-~sLgnl-hL~~L~leGNPlrTiRr~i 316 (565)
T KOG0472|consen 240 IEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEI-CLLRSLERLDLSNNDISSLP-YSLGNL-HLKFLALEGNPLRTIRREI 316 (565)
T ss_pred HHhhHHHHhcccccceeeeccccccccCchHH-HHhhhhhhhcccCCccccCC-cccccc-eeeehhhcCCchHHHHHHH
Confidence 99999998889999999999999999999875 46789999999999999886 567887 888888888744211
Q ss_pred -------------------------------------------------------------CCCccCCC--CCCCeEecC
Q psy12291 181 -------------------------------------------------------------PPGIFDDL--KYLDFLSLR 197 (404)
Q Consensus 181 -------------------------------------------------------------~~~~~~~l--~~L~~L~l~ 197 (404)
|.+.|..- .-...++++
T Consensus 317 i~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~Vnfs 396 (565)
T KOG0472|consen 317 ISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFS 396 (565)
T ss_pred HcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecc
Confidence 11111000 013344555
Q ss_pred CCcCc-----------------------ccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCc
Q psy12291 198 NNRLS-----------------------FIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPA 254 (404)
Q Consensus 198 ~~~~~-----------------------~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~ 254 (404)
.|++. +..+..+..+++|..|++++|.+..+| ..++.+..|+.|+++.|+|..+|.
T Consensus 397 kNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP-~e~~~lv~Lq~LnlS~NrFr~lP~ 475 (565)
T KOG0472|consen 397 KNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLP-EEMGSLVRLQTLNLSFNRFRMLPE 475 (565)
T ss_pred cchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhhcc-hhhhhhhhhheecccccccccchH
Confidence 55432 223344566789999999999998887 456788889999999999999987
Q ss_pred ccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCcc
Q psy12291 255 GSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATD 327 (404)
Q Consensus 255 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 327 (404)
.+..+..++.+-.++|++..+++.-+.++.+|..||+.+|.+..+++ .+++|.+|++|++.+|.+. .|..
T Consensus 476 -~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp-~LgnmtnL~hLeL~gNpfr-~Pr~ 545 (565)
T KOG0472|consen 476 -CLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPP-ILGNMTNLRHLELDGNPFR-QPRH 545 (565)
T ss_pred -HHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCCh-hhccccceeEEEecCCccC-CCHH
Confidence 56667788888888999999999888999999999999999999966 5789999999999999998 5543
No 12
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=3.4e-23 Score=201.43 Aligned_cols=258 Identities=27% Similarity=0.290 Sum_probs=212.5
Q ss_pred CeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCCCCcccCccccCCCCCCcEEEcc
Q psy12291 46 DIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLS 125 (404)
Q Consensus 46 ~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 125 (404)
+-..|+++.+.++.++. .+. ++|+.|++.+|+++.+|.. +++|++|++++|+++.+|.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~LtsLP~-~l~--~~L~~L~L~~N~Lt~LP~l----p~~Lk~LdLs~N~LtsLP~l----p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLTTLPD-CLP--AHITTLVIPDNNLTSLPAL----PPELRTLEVSGNQLTSLPVL----PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCCcCCc-chh--cCCCEEEccCCcCCCCCCC----CCCCcEEEecCCccCcccCc----ccccceeecc
Confidence 45679999999998765 343 4799999999999998852 57899999999999999852 4689999999
Q ss_pred CCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccC
Q psy12291 126 YNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIR 205 (404)
Q Consensus 126 ~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~ 205 (404)
+|.++.++.. +.+|+.|++++|.+..++. ..++|+.|++++|.+..++.. ..+|+.|.+++|.++.++
T Consensus 271 ~N~L~~Lp~l----p~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~l----p~~L~~L~Ls~N~L~~LP 338 (788)
T PRK15387 271 SNPLTHLPAL----PSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPAL----PSELCKLWAYNNQLTSLP 338 (788)
T ss_pred CCchhhhhhc----hhhcCEEECcCCccccccc----cccccceeECCCCccccCCCC----cccccccccccCcccccc
Confidence 9999887752 3578999999999987753 246899999999999988752 246889999999998765
Q ss_pred CCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCC
Q psy12291 206 PGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLT 285 (404)
Q Consensus 206 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 285 (404)
. ...+|+.|++++|.+..++. ..++|+.|++++|.+..++.. ..+|+.|++++|.++.++.. .+
T Consensus 339 ~----lp~~Lq~LdLS~N~Ls~LP~----lp~~L~~L~Ls~N~L~~LP~l----~~~L~~LdLs~N~Lt~LP~l----~s 402 (788)
T PRK15387 339 T----LPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTSLPAL----PSGLKELIVSGNRLTSLPVL----PS 402 (788)
T ss_pred c----cccccceEecCCCccCCCCC----CCcccceehhhccccccCccc----ccccceEEecCCcccCCCCc----cc
Confidence 3 23589999999999998764 235789999999999988752 36899999999999987642 36
Q ss_pred CCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCcccccCCCCCcEEEccCCcccc
Q psy12291 286 NLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHC 347 (404)
Q Consensus 286 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~Np~~C 347 (404)
+|+.|++++|+++.++.. ..+|+.|++++|+++.+|. .+..+++|+.|+|++||+..
T Consensus 403 ~L~~LdLS~N~LssIP~l----~~~L~~L~Ls~NqLt~LP~-sl~~L~~L~~LdLs~N~Ls~ 459 (788)
T PRK15387 403 ELKELMVSGNRLTSLPML----PSGLLSLSVYRNQLTRLPE-SLIHLSSETTVNLEGNPLSE 459 (788)
T ss_pred CCCEEEccCCcCCCCCcc----hhhhhhhhhccCcccccCh-HHhhccCCCeEECCCCCCCc
Confidence 899999999999988642 3578999999999999865 47789999999999999964
No 13
>KOG0618|consensus
Probab=99.88 E-value=6.8e-25 Score=207.91 Aligned_cols=288 Identities=29% Similarity=0.371 Sum_probs=189.8
Q ss_pred EEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcc------------------cccCCCCCCEEeCCCCCCcccCc
Q psy12291 49 VIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGK------------------LFISTINLSTMDLSQNLIKTLPS 110 (404)
Q Consensus 49 ~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~------------------~~~~~~~L~~L~l~~n~l~~~~~ 110 (404)
+||++.|.+... .+..+.+|+.|....|++..+... .-....+|+++++++|.+..+|
T Consensus 182 ~ldLr~N~~~~~---dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~lp- 257 (1081)
T KOG0618|consen 182 QLDLRYNEMEVL---DLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNLP- 257 (1081)
T ss_pred eeecccchhhhh---hhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhhcch-
Confidence 477777776622 234445555555555544433210 0012334555555555555555
Q ss_pred cccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCCCccCCCCC
Q psy12291 111 TFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKY 190 (404)
Q Consensus 111 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~ 190 (404)
.+...+.+|+.++..+|.++.++...+ ...+|+.|.+.+|.+..+++ ...+...|++|++..|.+...|+..|..+..
T Consensus 258 ~wi~~~~nle~l~~n~N~l~~lp~ri~-~~~~L~~l~~~~nel~yip~-~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~ 335 (1081)
T KOG0618|consen 258 EWIGACANLEALNANHNRLVALPLRIS-RITSLVSLSAAYNELEYIPP-FLEGLKSLRTLDLQSNNLPSLPDNFLAVLNA 335 (1081)
T ss_pred HHHHhcccceEecccchhHHhhHHHHh-hhhhHHHHHhhhhhhhhCCC-cccccceeeeeeehhccccccchHHHhhhhH
Confidence 345555555555555555555554432 23455555555555555442 2334555666666666655555543333322
Q ss_pred -CCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccCCCCCcEEECc
Q psy12291 191 -LDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLY 269 (404)
Q Consensus 191 -L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~ 269 (404)
++.|+.+.+++...+...-...+.|+.|.+.+|.+++.....+.+..+|+.|++++|++..+|...+.+++.|+.|+|+
T Consensus 336 ~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LS 415 (1081)
T KOG0618|consen 336 SLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLS 415 (1081)
T ss_pred HHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcc
Confidence 4444444444443332222334567888899999988777788899999999999999999999889999999999999
Q ss_pred CCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCcccccCCCCCcEEEccCCcc
Q psy12291 270 SNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPW 345 (404)
Q Consensus 270 ~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~Np~ 345 (404)
||+++.++ .....++.|++|...+|++..++ .+..++.|+.+|++.|+++.+........++|++||++||++
T Consensus 416 GNkL~~Lp-~tva~~~~L~tL~ahsN~l~~fP--e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 416 GNKLTTLP-DTVANLGRLHTLRAHSNQLLSFP--ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred cchhhhhh-HHHHhhhhhHHHhhcCCceeech--hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 99999997 66788999999999999999987 466789999999999999886543333448999999999996
No 14
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.87 E-value=2.2e-20 Score=194.75 Aligned_cols=302 Identities=25% Similarity=0.286 Sum_probs=215.6
Q ss_pred CCceEEecCCCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCC-cCcccCcccccCCCCCCEEeCC
Q psy12291 23 EIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKN-HLSELPGKLFISTINLSTMDLS 101 (404)
Q Consensus 23 ~~~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~-~l~~~~~~~~~~~~~L~~L~l~ 101 (404)
..+.+...+..++.+|... .+.+++.|+++++.+..+. ..+..+++|+.|+++++ .+..+|. +..+++|++|+++
T Consensus 590 ~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~-~~~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~ 665 (1153)
T PLN03210 590 KLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLW-DGVHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLS 665 (1153)
T ss_pred ccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccccc-cccccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEec
Confidence 4566777777788888653 5678888888888887664 34677888888888876 4566664 5678888888888
Q ss_pred CC-CCcccCccccCCCCCCcEEEccCC-CCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCC
Q psy12291 102 QN-LIKTLPSTFFKGAIRLTVVQLSYN-AIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQ 179 (404)
Q Consensus 102 ~n-~l~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~ 179 (404)
+| .+..+|.. +..+++|+.|++++| .++.+|... ++++|+.|++++|......+. ...+|+.|++++|.+..
T Consensus 666 ~c~~L~~lp~s-i~~L~~L~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~---~~~nL~~L~L~~n~i~~ 739 (1153)
T PLN03210 666 DCSSLVELPSS-IQYLNKLEDLDMSRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFPD---ISTNISWLDLDETAIEE 739 (1153)
T ss_pred CCCCccccchh-hhccCCCCEEeCCCCCCcCccCCcC--CCCCCCEEeCCCCCCcccccc---ccCCcCeeecCCCcccc
Confidence 87 45666654 777888888888875 466666543 577888888888753322211 23578888888888887
Q ss_pred CCCCccCCCCCCCeEecCCCcCcc-------cCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCC-CCcc
Q psy12291 180 LPPGIFDDLKYLDFLSLRNNRLSF-------IRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQN-YIET 251 (404)
Q Consensus 180 ~~~~~~~~l~~L~~L~l~~~~~~~-------~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~-~l~~ 251 (404)
+|... .+++|++|.+.++.... ..+..+...++|+.|++++|......+..+.++++|+.|++++| .+..
T Consensus 740 lP~~~--~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~ 817 (1153)
T PLN03210 740 FPSNL--RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLET 817 (1153)
T ss_pred ccccc--cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCe
Confidence 77542 56778888777643221 11222334568999999998665555567889999999999987 5667
Q ss_pred cCcccccCCCCCcEEECcCCC-ccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCC-CCCcccCcccc
Q psy12291 252 IPAGSFANLQSLEKLFLYSNN-IQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDS-NKLQYLATDSL 329 (404)
Q Consensus 252 ~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~ 329 (404)
+|... .+++|+.|++++|. +..++. ..++|++|+|++|.++.++ ..+..+++|+.|++++ ++++.++. .+
T Consensus 818 LP~~~--~L~sL~~L~Ls~c~~L~~~p~----~~~nL~~L~Ls~n~i~~iP-~si~~l~~L~~L~L~~C~~L~~l~~-~~ 889 (1153)
T PLN03210 818 LPTGI--NLESLESLDLSGCSRLRTFPD----ISTNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMNGCNNLQRVSL-NI 889 (1153)
T ss_pred eCCCC--CccccCEEECCCCCccccccc----cccccCEeECCCCCCccCh-HHHhcCCCCCEEECCCCCCcCccCc-cc
Confidence 76532 68899999999874 433322 2368999999999998874 4577889999999998 46777755 35
Q ss_pred cCCCCCcEEEccCCc
Q psy12291 330 SLLPNLITLKLAKNP 344 (404)
Q Consensus 330 ~~l~~L~~l~l~~Np 344 (404)
..+++|+.+++++++
T Consensus 890 ~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 890 SKLKHLETVDFSDCG 904 (1153)
T ss_pred ccccCCCeeecCCCc
Confidence 667778888877664
No 15
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=2.6e-21 Score=189.41 Aligned_cols=249 Identities=24% Similarity=0.329 Sum_probs=201.3
Q ss_pred CCCCEEEccCCcCcccCcccccCCCCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEEC
Q psy12291 69 YKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDL 148 (404)
Q Consensus 69 ~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 148 (404)
.+...|++++++++.+|... .++|+.|++++|.++.+|...+ .+|+.|++++|.++.++... ..+|+.|++
T Consensus 178 ~~~~~L~L~~~~LtsLP~~I---p~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~LtsLP~~l---~~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACI---PEQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTSIPATL---PDTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcCcCCccc---ccCCcEEEecCCCCCcCChhhc---cCCCEEECCCCccccCChhh---hccccEEEC
Confidence 45789999999999998754 4679999999999999987643 58999999999999887643 247999999
Q ss_pred CCCcccccccccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCC
Q psy12291 149 SQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSL 228 (404)
Q Consensus 149 ~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~ 228 (404)
++|.+..++.. +. .+|+.|++++|.++.+|.... ++|+.|++++|+++.++.. + .++|+.|++++|.+..+
T Consensus 249 s~N~L~~LP~~-l~--s~L~~L~Ls~N~L~~LP~~l~---~sL~~L~Ls~N~Lt~LP~~-l--p~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 249 SINRITELPER-LP--SALQSLDLFHNKISCLPENLP---EELRYLSVYDNSIRTLPAH-L--PSGITHLNVQSNSLTAL 319 (754)
T ss_pred cCCccCcCChh-Hh--CCCCEEECcCCccCccccccC---CCCcEEECCCCccccCccc-c--hhhHHHHHhcCCccccC
Confidence 99999877543 32 479999999999998876432 5899999999999876542 2 25789999999999877
Q ss_pred ChhhhcCCCCCcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCC
Q psy12291 229 NGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPM 308 (404)
Q Consensus 229 ~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l 308 (404)
+... .++|+.|++++|.++.++.. + .++|+.|++++|+++.++.. + .++|++|+|++|+++.++....
T Consensus 320 P~~l---~~sL~~L~Ls~N~Lt~LP~~-l--~~sL~~L~Ls~N~L~~LP~~-l--p~~L~~LdLs~N~Lt~LP~~l~--- 387 (754)
T PRK15370 320 PETL---PPGLKTLEAGENALTSLPAS-L--PPELQVLDVSKNQITVLPET-L--PPTITTLDVSRNALTNLPENLP--- 387 (754)
T ss_pred Cccc---cccceeccccCCccccCChh-h--cCcccEEECCCCCCCcCChh-h--cCCcCEEECCCCcCCCCCHhHH---
Confidence 6422 36899999999999998863 3 37999999999999987653 2 3689999999999998876533
Q ss_pred CCCcEEeCCCCCCcccCcc---cccCCCCCcEEEccCCcccc
Q psy12291 309 LHLKKLQLDSNKLQYLATD---SLSLLPNLITLKLAKNPWHC 347 (404)
Q Consensus 309 ~~L~~L~l~~n~l~~~~~~---~~~~l~~L~~l~l~~Np~~C 347 (404)
..|+.|++++|++..++.. ....++.+..+++.+||+..
T Consensus 388 ~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 388 AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 3799999999999988653 23345888999999999973
No 16
>KOG0618|consensus
Probab=99.86 E-value=7.7e-24 Score=200.83 Aligned_cols=309 Identities=28% Similarity=0.370 Sum_probs=222.3
Q ss_pred CceEEecCCCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCC
Q psy12291 24 IHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQN 103 (404)
Q Consensus 24 ~~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n 103 (404)
.+.+.|..+.+..+... -..+++|+.++|.+..+... .--.+|++++++.+++..+| .....+.+|+.++..+|
T Consensus 201 l~~l~c~rn~ls~l~~~---g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N 274 (1081)
T KOG0618|consen 201 LEVLHCERNQLSELEIS---GPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLSNLP-EWIGACANLEALNANHN 274 (1081)
T ss_pred hhhhhhhhcccceEEec---CcchheeeeccCcceeeccc--cccccceeeecchhhhhcch-HHHHhcccceEecccch
Confidence 45666766666665542 23678888888877744322 22357888888888888888 44577888888888888
Q ss_pred CCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCcc-CcEEeccCCCCCCCCC
Q psy12291 104 LIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYS-LKRLKLQSNRINQLPP 182 (404)
Q Consensus 104 ~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~-L~~L~l~~~~l~~~~~ 182 (404)
.+..+|.. +....+|+.|.+.+|.+..+++.. .+++.|++|++..|.+..++...+..... |+.|..+.+.+...+.
T Consensus 275 ~l~~lp~r-i~~~~~L~~l~~~~nel~yip~~l-e~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~ 352 (1081)
T KOG0618|consen 275 RLVALPLR-ISRITSLVSLSAAYNELEYIPPFL-EGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPS 352 (1081)
T ss_pred hHHhhHHH-HhhhhhHHHHHhhhhhhhhCCCcc-cccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccccccc
Confidence 88777766 445678888888888888877643 45778888888888887777655544433 6677777777766654
Q ss_pred CccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccCCCC
Q psy12291 183 GIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQS 262 (404)
Q Consensus 183 ~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~ 262 (404)
..=...+.|+.|.+.+|.++.-.-..+.+.++|+.|++++|++..++...+.++..|++|+++||.++.++. .+..++.
T Consensus 353 ~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~-tva~~~~ 431 (1081)
T KOG0618|consen 353 YEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPD-TVANLGR 431 (1081)
T ss_pred ccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhH-HHHhhhh
Confidence 322345667888888888876555667778888888888888888887778888888888888888888874 6677888
Q ss_pred CcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCcccccCCCCCcEEEccC
Q psy12291 263 LEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAK 342 (404)
Q Consensus 263 L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~ 342 (404)
|++|..-+|.+..++ -+..++.|+.+|++.|+++.+....-..-++|++||+++|.-..++...+..+.++...++.-
T Consensus 432 L~tL~ahsN~l~~fP--e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~ 509 (1081)
T KOG0618|consen 432 LHTLRAHSNQLLSFP--ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITL 509 (1081)
T ss_pred hHHHhhcCCceeech--hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheeccc
Confidence 888888888888776 366778888888888888776543322337888888888876666666677777776666655
Q ss_pred C
Q psy12291 343 N 343 (404)
Q Consensus 343 N 343 (404)
|
T Consensus 510 ~ 510 (1081)
T KOG0618|consen 510 N 510 (1081)
T ss_pred C
Confidence 5
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=9.2e-21 Score=185.62 Aligned_cols=246 Identities=23% Similarity=0.299 Sum_probs=179.6
Q ss_pred CceEEecCCCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCC
Q psy12291 24 IHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQN 103 (404)
Q Consensus 24 ~~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n 103 (404)
...+++.+.+++.+|.. +|..++.|++++|.++.++...+ .+|++|++++|+++.+|... ..+|+.|++++|
T Consensus 180 ~~~L~L~~~~LtsLP~~--Ip~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~LtsLP~~l---~~~L~~L~Ls~N 251 (754)
T PRK15370 180 KTELRLKILGLTTIPAC--IPEQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTSIPATL---PDTIQEMELSIN 251 (754)
T ss_pred ceEEEeCCCCcCcCCcc--cccCCcEEEecCCCCCcCChhhc---cCCCEEECCCCccccCChhh---hccccEEECcCC
Confidence 56788888889998875 67789999999999988765433 47899999999998887653 347899999999
Q ss_pred CCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCCC
Q psy12291 104 LIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPG 183 (404)
Q Consensus 104 ~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~ 183 (404)
.+..+|.... .+|+.|++++|.++.++.... ++|+.|++++|.+..++.. +. ++|+.|++++|.++.++..
T Consensus 252 ~L~~LP~~l~---s~L~~L~Ls~N~L~~LP~~l~---~sL~~L~Ls~N~Lt~LP~~-lp--~sL~~L~Ls~N~Lt~LP~~ 322 (754)
T PRK15370 252 RITELPERLP---SALQSLDLFHNKISCLPENLP---EELRYLSVYDNSIRTLPAH-LP--SGITHLNVQSNSLTALPET 322 (754)
T ss_pred ccCcCChhHh---CCCCEEECcCCccCccccccC---CCCcEEECCCCccccCccc-ch--hhHHHHHhcCCccccCCcc
Confidence 9888887532 478999999998888776432 4788999999888776532 22 3688888888888877654
Q ss_pred ccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccCCCCC
Q psy12291 184 IFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSL 263 (404)
Q Consensus 184 ~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L 263 (404)
. .++|+.|++++|.++.++.. + .++|+.|++++|.+..++. .+ .++|+.|++++|.+..+|... . ..|
T Consensus 323 l---~~sL~~L~Ls~N~Lt~LP~~-l--~~sL~~L~Ls~N~L~~LP~-~l--p~~L~~LdLs~N~Lt~LP~~l-~--~sL 390 (754)
T PRK15370 323 L---PPGLKTLEAGENALTSLPAS-L--PPELQVLDVSKNQITVLPE-TL--PPTITTLDVSRNALTNLPENL-P--AAL 390 (754)
T ss_pred c---cccceeccccCCccccCChh-h--cCcccEEECCCCCCCcCCh-hh--cCCcCEEECCCCcCCCCCHhH-H--HHH
Confidence 3 25788888888887766432 2 2578888888887776653 22 257888888888887777632 2 357
Q ss_pred cEEECcCCCccccccc---cccCCCCCCeeeccccccc
Q psy12291 264 EKLFLYSNNIQELHAG---TFAGLTNLTALFLNNNLLR 298 (404)
Q Consensus 264 ~~L~L~~n~l~~~~~~---~~~~~~~L~~L~l~~n~i~ 298 (404)
+.|++++|++..++.. .+..++.+..|++.+|.+.
T Consensus 391 ~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 391 QIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 7788888877766432 2334567777788777765
No 18
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.84 E-value=5.4e-19 Score=184.49 Aligned_cols=281 Identities=23% Similarity=0.282 Sum_probs=193.3
Q ss_pred CCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCC-CCcccCccccCCCCCCcE
Q psy12291 43 IPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQN-LIKTLPSTFFKGAIRLTV 121 (404)
Q Consensus 43 ~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~~~~L~~ 121 (404)
+|..++.|++.++.++.++.. | ...+|+.|+++++++..++.. +..+++|++|+++++ .++.+|. +..+++|+.
T Consensus 587 lp~~Lr~L~~~~~~l~~lP~~-f-~~~~L~~L~L~~s~l~~L~~~-~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~ 661 (1153)
T PLN03210 587 LPPKLRLLRWDKYPLRCMPSN-F-RPENLVKLQMQGSKLEKLWDG-VHSLTGLRNIDLRGSKNLKEIPD--LSMATNLET 661 (1153)
T ss_pred cCcccEEEEecCCCCCCCCCc-C-CccCCcEEECcCccccccccc-cccCCCCCEEECCCCCCcCcCCc--cccCCcccE
Confidence 355688888888777766543 3 457788888888888777655 367788888888876 4666664 667788888
Q ss_pred EEccCCC-CCcCCCccCCCCCCCCEEECCCCc-ccccccccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCC
Q psy12291 122 VQLSYNA-IESLPANVFHDLISLEELDLSQNV-LTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNN 199 (404)
Q Consensus 122 L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~~~-l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~ 199 (404)
|++++|. +..++. .+..+++|+.|++++|. +..++. .+ ++++|+.|++++|......+. ...+|+.|+++++
T Consensus 662 L~L~~c~~L~~lp~-si~~L~~L~~L~L~~c~~L~~Lp~-~i-~l~sL~~L~Lsgc~~L~~~p~---~~~nL~~L~L~~n 735 (1153)
T PLN03210 662 LKLSDCSSLVELPS-SIQYLNKLEDLDMSRCENLEILPT-GI-NLKSLYRLNLSGCSRLKSFPD---ISTNISWLDLDET 735 (1153)
T ss_pred EEecCCCCccccch-hhhccCCCCEEeCCCCCCcCccCC-cC-CCCCCCEEeCCCCCCcccccc---ccCCcCeeecCCC
Confidence 8887764 444443 35677788888888763 444432 22 567788888887753322221 2356788888888
Q ss_pred cCcccCCCccCCCCCCCEEECCCCcCCC-------CChhhhcCCCCCcEEECCCCC-CcccCcccccCCCCCcEEECcCC
Q psy12291 200 RLSFIRPGLFNYFKHLTFLELSENWISS-------LNGDEFSQLTSLKELHLGQNY-IETIPAGSFANLQSLEKLFLYSN 271 (404)
Q Consensus 200 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~-------~~~~~~~~l~~L~~L~l~~~~-l~~~~~~~~~~l~~L~~L~L~~n 271 (404)
.+..++.. + .+++|+.|.+.++.... ..+..+...++|+.|++++|. +..+|. .+..+++|+.|++++|
T Consensus 736 ~i~~lP~~-~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~-si~~L~~L~~L~Ls~C 812 (1153)
T PLN03210 736 AIEEFPSN-L-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPS-SIQNLHKLEHLEIENC 812 (1153)
T ss_pred cccccccc-c-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccCh-hhhCCCCCCEEECCCC
Confidence 77665432 2 46777777776643211 111222345689999999985 445555 6889999999999987
Q ss_pred -CccccccccccCCCCCCeeeccccc-ccccCccccCCCCCCcEEeCCCCCCcccCcccccCCCCCcEEEccCCc
Q psy12291 272 -NIQELHAGTFAGLTNLTALFLNNNL-LRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNP 344 (404)
Q Consensus 272 -~l~~~~~~~~~~~~~L~~L~l~~n~-i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~Np 344 (404)
.+..++... .+++|+.|++++|. +..++. ...+|+.|+|++|.++.+|. .+..+++|+.|++.+|+
T Consensus 813 ~~L~~LP~~~--~L~sL~~L~Ls~c~~L~~~p~----~~~nL~~L~Ls~n~i~~iP~-si~~l~~L~~L~L~~C~ 880 (1153)
T PLN03210 813 INLETLPTGI--NLESLESLDLSGCSRLRTFPD----ISTNISDLNLSRTGIEEVPW-WIEKFSNLSFLDMNGCN 880 (1153)
T ss_pred CCcCeeCCCC--CccccCEEECCCCCccccccc----cccccCEeECCCCCCccChH-HHhcCCCCCEEECCCCC
Confidence 567665532 68999999999974 333322 23689999999999998865 57889999999999853
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=8.9e-20 Score=165.89 Aligned_cols=276 Identities=25% Similarity=0.234 Sum_probs=147.0
Q ss_pred EEEcCCCCCccc-ChhhcCCCCCCCEEEccCCcCcc-----cCcccccCCCCCCEEeCCCCCCcccCc------cccCCC
Q psy12291 49 VIDLGINQLSTL-SKDAFTGLYKLTELKLRKNHLSE-----LPGKLFISTINLSTMDLSQNLIKTLPS------TFFKGA 116 (404)
Q Consensus 49 ~L~l~~~~i~~~-~~~~~~~~~~L~~L~l~~~~l~~-----~~~~~~~~~~~L~~L~l~~n~l~~~~~------~~~~~~ 116 (404)
+|++..+.++.. ....|..+..|+.|+++++.++. ++. .+...+.+++++++++.+...+. ..+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~-~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALAS-ALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHH-HHhhCCCceEEeccccccCCcchHHHHHHHHHHhc
Confidence 356666666522 22334556667788887777642 222 23455667777777776552111 224445
Q ss_pred CCCcEEEccCCCCCcCCCccCCCC---CCCCEEECCCCcccccc----cccccCC-ccCcEEeccCCCCCCCCCCccCCC
Q psy12291 117 IRLTVVQLSYNAIESLPANVFHDL---ISLEELDLSQNVLTSIQ----YGTFSGM-YSLKRLKLQSNRINQLPPGIFDDL 188 (404)
Q Consensus 117 ~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~l~~~~l~~~~----~~~l~~l-~~L~~L~l~~~~l~~~~~~~~~~l 188 (404)
++|+.|++++|.+.......+..+ ++|++|++++|.+.... ...+..+ ++|+.|++++|.++....
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~------ 154 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASC------ 154 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHH------
Confidence 566666666666543222222222 22555555555544211 1112223 344444444444431100
Q ss_pred CCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCC----hhhhcCCCCCcEEECCCCCCcccCc----ccccCC
Q psy12291 189 KYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLN----GDEFSQLTSLKELHLGQNYIETIPA----GSFANL 260 (404)
Q Consensus 189 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~----~~~~~~l~~L~~L~l~~~~l~~~~~----~~~~~l 260 (404)
......+..+++|++|++++|.+.... ...+...++|++|++++|.+..... ..+..+
T Consensus 155 --------------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~ 220 (319)
T cd00116 155 --------------EALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASL 220 (319)
T ss_pred --------------HHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhccc
Confidence 001122334455666666666555321 1223344567777777776653321 234556
Q ss_pred CCCcEEECcCCCcccccccccc-----CCCCCCeeecccccccccCc----cccCCCCCCcEEeCCCCCCcccCcc----
Q psy12291 261 QSLEKLFLYSNNIQELHAGTFA-----GLTNLTALFLNNNLLRYLDT----KAFEPMLHLKKLQLDSNKLQYLATD---- 327 (404)
Q Consensus 261 ~~L~~L~L~~n~l~~~~~~~~~-----~~~~L~~L~l~~n~i~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~---- 327 (404)
++|+.|++++|.+++.....+. ..+.|++|++++|.++.... ..+..+++|+++++++|.+...+..
T Consensus 221 ~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~ 300 (319)
T cd00116 221 KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAE 300 (319)
T ss_pred CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHH
Confidence 7788888888777653332221 23678888888887763211 3445567888888888888865432
Q ss_pred cccCC-CCCcEEEccCCcc
Q psy12291 328 SLSLL-PNLITLKLAKNPW 345 (404)
Q Consensus 328 ~~~~l-~~L~~l~l~~Np~ 345 (404)
.+... +.++.+++.+|||
T Consensus 301 ~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 301 SLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHhhcCCchhhcccCCCCC
Confidence 23334 6888888888886
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=7.5e-19 Score=159.81 Aligned_cols=255 Identities=24% Similarity=0.238 Sum_probs=152.9
Q ss_pred CeeEEEcCCCCCcccC----hhhcCCCCCCCEEEccCCcCcccC------cccccCCCCCCEEeCCCCCCcccCccccCC
Q psy12291 46 DIRVIDLGINQLSTLS----KDAFTGLYKLTELKLRKNHLSELP------GKLFISTINLSTMDLSQNLIKTLPSTFFKG 115 (404)
Q Consensus 46 ~l~~L~l~~~~i~~~~----~~~~~~~~~L~~L~l~~~~l~~~~------~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 115 (404)
.++.|+++++.++... ...+...+.+++|+++++.+...+ ...|..+++|++|++++|.+.......+..
T Consensus 24 ~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~ 103 (319)
T cd00116 24 CLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLES 103 (319)
T ss_pred hccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHH
Confidence 4999999999985432 234567788999999998776311 234567889999999999987544333434
Q ss_pred C---CCCcEEEccCCCCCcCC----CccCCCC-CCCCEEECCCCcccccc----cccccCCccCcEEeccCCCCCCCCC-
Q psy12291 116 A---IRLTVVQLSYNAIESLP----ANVFHDL-ISLEELDLSQNVLTSIQ----YGTFSGMYSLKRLKLQSNRINQLPP- 182 (404)
Q Consensus 116 ~---~~L~~L~l~~n~l~~~~----~~~~~~l-~~L~~L~l~~~~l~~~~----~~~l~~l~~L~~L~l~~~~l~~~~~- 182 (404)
+ ++|++|++++|.+.... ...+..+ ++|+.|++++|.+.... ...+..+++|++|++++|.++....
T Consensus 104 l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 183 (319)
T cd00116 104 LLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIR 183 (319)
T ss_pred HhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHH
Confidence 4 45999999999887311 1223455 89999999999887322 2345566778888888887763110
Q ss_pred ---CccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccc--
Q psy12291 183 ---GIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSF-- 257 (404)
Q Consensus 183 ---~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~-- 257 (404)
..+...++|+.|++++|.++......+ ...+..+++|++|++++|.+.......+
T Consensus 184 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l--------------------~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~ 243 (319)
T cd00116 184 ALAEGLKANCNLEVLDLNNNGLTDEGASAL--------------------AETLASLKSLEVLNLGDNNLTDAGAAALAS 243 (319)
T ss_pred HHHHHHHhCCCCCEEeccCCccChHHHHHH--------------------HHHhcccCCCCEEecCCCcCchHHHHHHHH
Confidence 112233455556655555432211000 1123344556666666655543211111
Q ss_pred ---cCCCCCcEEECcCCCcccccc----ccccCCCCCCeeecccccccccCc----cccCCC-CCCcEEeCCCCC
Q psy12291 258 ---ANLQSLEKLFLYSNNIQELHA----GTFAGLTNLTALFLNNNLLRYLDT----KAFEPM-LHLKKLQLDSNK 320 (404)
Q Consensus 258 ---~~l~~L~~L~L~~n~l~~~~~----~~~~~~~~L~~L~l~~n~i~~~~~----~~~~~l-~~L~~L~l~~n~ 320 (404)
...+.|+.|++++|.+++... ..+..+++|+++++++|.++..+. ..+... ++|+++++.+|.
T Consensus 244 ~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 244 ALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 123567777777776653211 233445677777777777765432 233333 577777777665
No 21
>KOG0617|consensus
Probab=99.59 E-value=2e-17 Score=127.68 Aligned_cols=131 Identities=34% Similarity=0.532 Sum_probs=77.1
Q ss_pred CCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEE
Q psy12291 67 GLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEEL 146 (404)
Q Consensus 67 ~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 146 (404)
.+.+++.|.++.|+++.+|+.+ +.+.+|+.|++++|+++++|.. ++.+++|+.|++.-|.+...|.+ |+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~~vppni-a~l~nlevln~~nnqie~lp~~-issl~klr~lnvgmnrl~~lprg-fgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPNI-AELKNLEVLNLSNNQIEELPTS-ISSLPKLRILNVGMNRLNILPRG-FGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCceeecCCcH-HHhhhhhhhhcccchhhhcChh-hhhchhhhheecchhhhhcCccc-cCCCchhhhh
Confidence 3455566666666666666654 5666666666666666666654 55666666666666666555443 4666666666
Q ss_pred ECCCCcccc-cccccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCCcC
Q psy12291 147 DLSQNVLTS-IQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRL 201 (404)
Q Consensus 147 ~l~~~~l~~-~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~ 201 (404)
|+.+|.+.. ..++.|-.+..|+.|++++|.+.-+|++. +++++|+.|.+..|.+
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dv-g~lt~lqil~lrdndl 162 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDV-GKLTNLQILSLRDNDL 162 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcccCChhh-hhhcceeEEeeccCch
Confidence 666665542 23344555566666666666666555543 5555555555555443
No 22
>KOG0617|consensus
Probab=99.57 E-value=2.5e-17 Score=127.08 Aligned_cols=159 Identities=28% Similarity=0.436 Sum_probs=139.9
Q ss_pred CCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCCCCcccCccccCCCCCCcEE
Q psy12291 43 IPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVV 122 (404)
Q Consensus 43 ~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 122 (404)
....++.|.+++|.++.++++ ++.+.+|+.|++++|+|+++|... +.+++|+.|+++-|++..+|.+ |+.++.|++|
T Consensus 31 ~~s~ITrLtLSHNKl~~vppn-ia~l~nlevln~~nnqie~lp~~i-ssl~klr~lnvgmnrl~~lprg-fgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPN-IAELKNLEVLNLSNNQIEELPTSI-SSLPKLRILNVGMNRLNILPRG-FGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCceeecCCc-HHHhhhhhhhhcccchhhhcChhh-hhchhhhheecchhhhhcCccc-cCCCchhhhh
Confidence 345799999999999998776 899999999999999999999875 8999999999999999999987 9999999999
Q ss_pred EccCCCCCc--CCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCCc
Q psy12291 123 QLSYNAIES--LPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNR 200 (404)
Q Consensus 123 ~l~~n~l~~--~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~ 200 (404)
++.+|++.. +|+.+ -.+..|+.|.++.|.+..++ ..++++++|+.|.+.+|.+-.+|.+ ++.++.|+.|.+.+|+
T Consensus 108 dltynnl~e~~lpgnf-f~m~tlralyl~dndfe~lp-~dvg~lt~lqil~lrdndll~lpke-ig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNF-FYMTTLRALYLGDNDFEILP-PDVGKLTNLQILSLRDNDLLSLPKE-IGDLTRLRELHIQGNR 184 (264)
T ss_pred hccccccccccCCcch-hHHHHHHHHHhcCCCcccCC-hhhhhhcceeEEeeccCchhhCcHH-HHHHHHHHHHhcccce
Confidence 999999873 55554 46889999999999987766 5678999999999999999998876 4889999999999999
Q ss_pred CcccCCC
Q psy12291 201 LSFIRPG 207 (404)
Q Consensus 201 ~~~~~~~ 207 (404)
++.++|+
T Consensus 185 l~vlppe 191 (264)
T KOG0617|consen 185 LTVLPPE 191 (264)
T ss_pred eeecChh
Confidence 9877653
No 23
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.39 E-value=4.6e-13 Score=107.85 Aligned_cols=111 Identities=34% Similarity=0.437 Sum_probs=42.3
Q ss_pred cCCCCCcEEECCCCCCcccCccccc-CCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCc
Q psy12291 234 SQLTSLKELHLGQNYIETIPAGSFA-NLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLK 312 (404)
Q Consensus 234 ~~l~~L~~L~l~~~~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 312 (404)
.+..++++|++.+|.+..+.. +. .+.+|+.|++++|.|+.+.. +..++.|++|++++|+|+.+.......+++|+
T Consensus 16 ~n~~~~~~L~L~~n~I~~Ie~--L~~~l~~L~~L~Ls~N~I~~l~~--l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTIEN--LGATLDKLEVLDLSNNQITKLEG--LPGLPRLKTLDLSNNRISSISEGLDKNLPNLQ 91 (175)
T ss_dssp --------------------S----TT-TT--EEE-TTS--S--TT------TT--EEE--SS---S-CHHHHHH-TT--
T ss_pred ccccccccccccccccccccc--hhhhhcCCCEEECCCCCCccccC--ccChhhhhhcccCCCCCCccccchHHhCCcCC
Confidence 344567888888888887754 33 56788888888888888764 67788888888888888888543334578889
Q ss_pred EEeCCCCCCcccCc-ccccCCCCCcEEEccCCccccc
Q psy12291 313 KLQLDSNKLQYLAT-DSLSLLPNLITLKLAKNPWHCD 348 (404)
Q Consensus 313 ~L~l~~n~l~~~~~-~~~~~l~~L~~l~l~~Np~~C~ 348 (404)
+|++++|++..+.. ..+..+++|+.|++.|||+.-.
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~ 128 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK 128 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch
Confidence 99999998887654 4567789999999999998433
No 24
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.37 E-value=3.2e-13 Score=108.74 Aligned_cols=127 Identities=28% Similarity=0.356 Sum_probs=50.3
Q ss_pred CCCCCCEEECCCCcCCCCChhhhc-CCCCCcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCe
Q psy12291 211 YFKHLTFLELSENWISSLNGDEFS-QLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTA 289 (404)
Q Consensus 211 ~l~~L~~L~l~~~~~~~~~~~~~~-~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~ 289 (404)
+..++++|++.+|.+..+. .+. .+.+|+.|++++|.+..+.. +..++.|+.|++++|.|+.+.......+++|++
T Consensus 17 n~~~~~~L~L~~n~I~~Ie--~L~~~l~~L~~L~Ls~N~I~~l~~--l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTIE--NLGATLDKLEVLDLSNNQITKLEG--LPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S--TT------TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred ccccccccccccccccccc--chhhhhcCCCEEECCCCCCccccC--ccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 3445666777777666653 233 45677888888888877764 667788888888888888775433345788888
Q ss_pred eecccccccccCc-cccCCCCCCcEEeCCCCCCcccCcc---cccCCCCCcEEEcc
Q psy12291 290 LFLNNNLLRYLDT-KAFEPMLHLKKLQLDSNKLQYLATD---SLSLLPNLITLKLA 341 (404)
Q Consensus 290 L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~---~~~~l~~L~~l~l~ 341 (404)
|++++|+|..+.. ..+..+++|+.|+|.+|.+.....+ .+..+|+|+.||-.
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 8888888877654 5667788888888888888765442 35568888888764
No 25
>KOG1259|consensus
Probab=99.33 E-value=2.4e-13 Score=114.56 Aligned_cols=200 Identities=25% Similarity=0.257 Sum_probs=127.5
Q ss_pred CCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCC-CcCcccCCCccCCCCCCCE
Q psy12291 139 DLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRN-NRLSFIRPGLFNYFKHLTF 217 (404)
Q Consensus 139 ~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~-~~~~~~~~~~~~~l~~L~~ 217 (404)
.+.+|+.+.++.+.-..+-.-. ..-+.|+.+.+.+..++..+. +-..+.+....... ...++.....+..++.|++
T Consensus 212 ~f~~l~~~~~s~~~~~~i~~~~-~~kptl~t~~v~~s~~~~~~~--l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~Lte 288 (490)
T KOG1259|consen 212 AFRNLKTLKFSALSTENIVDIE-LLKPTLQTICVHNTTIQDVPS--LLPETILADPSGSEPSTSNGSALVSADTWQELTE 288 (490)
T ss_pred Hhhhhheeeeeccchhheecee-ecCchhheeeeeccccccccc--ccchhhhcCccCCCCCccCCceEEecchHhhhhh
Confidence 3456666777666543332111 123567777766655443321 11111111111111 1111111223344567888
Q ss_pred EECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccc
Q psy12291 218 LELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLL 297 (404)
Q Consensus 218 L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i 297 (404)
+++++|.++.++ ....-+|+++.|+++.|.+..+.. +..+++|+.|+|++|.++.+.. +-..+.+++.|.|++|.|
T Consensus 289 lDLS~N~I~~iD-ESvKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls~~~G-wh~KLGNIKtL~La~N~i 364 (490)
T KOG1259|consen 289 LDLSGNLITQID-ESVKLAPKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLAECVG-WHLKLGNIKTLKLAQNKI 364 (490)
T ss_pred ccccccchhhhh-hhhhhccceeEEeccccceeeehh--hhhcccceEeecccchhHhhhh-hHhhhcCEeeeehhhhhH
Confidence 888888888776 455667888888888888887765 6778888888888888887743 344567888888888888
Q ss_pred cccCccccCCCCCCcEEeCCCCCCcccCc-ccccCCCCCcEEEccCCcccc
Q psy12291 298 RYLDTKAFEPMLHLKKLQLDSNKLQYLAT-DSLSLLPNLITLKLAKNPWHC 347 (404)
Q Consensus 298 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~l~l~~Np~~C 347 (404)
..+. .+..+-+|..||+++|++..++. ..++.+|-|+.+.|.+||+.-
T Consensus 365 E~LS--GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 365 ETLS--GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhh--hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 7763 35666788888888888887654 457788888888888888754
No 26
>KOG3207|consensus
Probab=99.28 E-value=4.2e-13 Score=118.58 Aligned_cols=213 Identities=23% Similarity=0.232 Sum_probs=145.9
Q ss_pred CCCCCCcEEEccCCCCCcCCC-ccCCCCCCCCEEECCCCccccccc--ccccCCccCcEEeccCCCCCCCC-CCccCCCC
Q psy12291 114 KGAIRLTVVQLSYNAIESLPA-NVFHDLISLEELDLSQNVLTSIQY--GTFSGMYSLKRLKLQSNRINQLP-PGIFDDLK 189 (404)
Q Consensus 114 ~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~~~l~~~~~--~~l~~l~~L~~L~l~~~~l~~~~-~~~~~~l~ 189 (404)
+++.+|+.+.|.+......+. .....+++++.|+++.|-+....+ .-...+++|+.|+++.|.+.... ...-..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 457788999998887765542 345678899999999987654432 12356789999999998876322 11123467
Q ss_pred CCCeEecCCCcCcccCC-CccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCc-ccccCCCCCcEEE
Q psy12291 190 YLDFLSLRNNRLSFIRP-GLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPA-GSFANLQSLEKLF 267 (404)
Q Consensus 190 ~L~~L~l~~~~~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~-~~~~~l~~L~~L~ 267 (404)
+|+.|.++.|.++.-.. .....+|+|+.|++..|....+......-+..|+.|+|++|++-..+. .....+|.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 88889998888763221 224567888888888885322222333455678889999888776662 2456788888888
Q ss_pred CcCCCcccccccc------ccCCCCCCeeecccccccccCc-cccCCCCCCcEEeCCCCCCcccCc
Q psy12291 268 LYSNNIQELHAGT------FAGLTNLTALFLNNNLLRYLDT-KAFEPMLHLKKLQLDSNKLQYLAT 326 (404)
Q Consensus 268 L~~n~l~~~~~~~------~~~~~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~ 326 (404)
++.+.+.++..-. ...+++|++|+++.|+|..+.. ..+..+++|+.|.+..|.+.....
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e~~ 343 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKETD 343 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccccccc
Confidence 8888887653311 2446888888888888876654 556667788888888887776543
No 27
>KOG1259|consensus
Probab=99.25 E-value=1.4e-12 Score=109.98 Aligned_cols=227 Identities=19% Similarity=0.175 Sum_probs=149.2
Q ss_pred CCCCCEEeCCCCC--Cc--ccCcc----ccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccC
Q psy12291 92 TINLSTMDLSQNL--IK--TLPST----FFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSG 163 (404)
Q Consensus 92 ~~~L~~L~l~~n~--l~--~~~~~----~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~ 163 (404)
+..|.+|.++... +. .|.+. -+.-+.+|+.+.++.+.-..|..-... -|.|+++.+.+..+...+ .+-.
T Consensus 181 ~~~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f~~l~~~~~s~~~~~~i~~~~~~-kptl~t~~v~~s~~~~~~--~l~p 257 (490)
T KOG1259|consen 181 CTQLVALVVTPVKDPIDRSNIIPNRLSFNLNAFRNLKTLKFSALSTENIVDIELL-KPTLQTICVHNTTIQDVP--SLLP 257 (490)
T ss_pred hhheeEEEecCCCCCCccccccccccccchHHhhhhheeeeeccchhheeceeec-Cchhheeeeecccccccc--cccc
Confidence 4567777776542 22 12111 133356777777777655544433222 357777777665444332 1111
Q ss_pred CccCcEEeccCCCC-CCCCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEE
Q psy12291 164 MYSLKRLKLQSNRI-NQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKEL 242 (404)
Q Consensus 164 l~~L~~L~l~~~~l-~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L 242 (404)
...+.......-.. ++........-..|+++++++|.++.++ +.+.-.|.++.|+++.|.+..+.. +..+++|++|
T Consensus 258 e~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~~iD-ESvKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~L 334 (490)
T KOG1259|consen 258 ETILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLITQID-ESVKLAPKLRRLILSQNRIRTVQN--LAELPQLQLL 334 (490)
T ss_pred hhhhcCccCCCCCccCCceEEecchHhhhhhccccccchhhhh-hhhhhccceeEEeccccceeeehh--hhhcccceEe
Confidence 12222211111111 1100011122346888888888888774 456777889999999998887763 7778899999
Q ss_pred ECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCc-cccCCCCCCcEEeCCCCCC
Q psy12291 243 HLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDT-KAFEPMLHLKKLQLDSNKL 321 (404)
Q Consensus 243 ~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l 321 (404)
++++|.++.+.. +-..+.+.++|.|++|.|.++.. +..+-+|..||+++|+|..++. ..++++|-|+.+.|.+|.+
T Consensus 335 DLS~N~Ls~~~G-wh~KLGNIKtL~La~N~iE~LSG--L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 335 DLSGNLLAECVG-WHLKLGNIKTLKLAQNKIETLSG--LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred ecccchhHhhhh-hHhhhcCEeeeehhhhhHhhhhh--hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 999998888775 45567889999999999888754 6677899999999999988764 6788899999999999999
Q ss_pred cccCcc
Q psy12291 322 QYLATD 327 (404)
Q Consensus 322 ~~~~~~ 327 (404)
..++.+
T Consensus 412 ~~~vdY 417 (490)
T KOG1259|consen 412 AGSVDY 417 (490)
T ss_pred cccchH
Confidence 988764
No 28
>KOG0531|consensus
Probab=99.23 E-value=8.7e-13 Score=123.68 Aligned_cols=266 Identities=32% Similarity=0.445 Sum_probs=144.7
Q ss_pred CCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCCCCcccCccccCCCCCCcEE
Q psy12291 43 IPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVV 122 (404)
Q Consensus 43 ~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 122 (404)
.+...+.++...+.+...... ...+..++.+.+..|.+..+... +..+.+|+.|++.+|.|..+... +..+++|++|
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~~~~~-l~~~~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L 123 (414)
T KOG0531|consen 47 VPSDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAKILNH-LSKLKSLEALDLYDNKIEKIENL-LSSLVNLQVL 123 (414)
T ss_pred ccchhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhhhhcc-cccccceeeeeccccchhhcccc-hhhhhcchhe
Confidence 344555555555544433222 13455666666777777663322 35667777777777777766543 4567777777
Q ss_pred EccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCC-CccCCCCCCCeEecCCCcC
Q psy12291 123 QLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPP-GIFDDLKYLDFLSLRNNRL 201 (404)
Q Consensus 123 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~-~~~~~l~~L~~L~l~~~~~ 201 (404)
++++|.|+.+.+ +..++.|+.|++++|.+..+. .+..+..|+.+++++|.+..+.. . ...+.+++.+.+.+|.+
T Consensus 124 ~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~~~--~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i 198 (414)
T KOG0531|consen 124 DLSFNKITKLEG--LSTLTLLKELNLSGNLISDIS--GLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSI 198 (414)
T ss_pred eccccccccccc--hhhccchhhheeccCcchhcc--CCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCch
Confidence 777777777665 445566777777777776664 23346677777777777766654 1 24455666666666665
Q ss_pred cccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCC--CcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccc
Q psy12291 202 SFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTS--LKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAG 279 (404)
Q Consensus 202 ~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~--L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 279 (404)
..+.. +..+..+..+++..|.+..+.+ +..+.. |+.++++++++..++. .+..+..+..|++.+|.+..+..
T Consensus 199 ~~i~~--~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~~~-~~~~~~~l~~l~~~~n~~~~~~~- 272 (414)
T KOG0531|consen 199 REIEG--LDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRSPE-GLENLKNLPVLDLSSNRISNLEG- 272 (414)
T ss_pred hcccc--hHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccccccc-cccccccccccchhhcccccccc-
Confidence 54321 2223333334555555544431 112222 5666666666655531 24445566666666665555432
Q ss_pred cccCCCCCCeeecccccccccC---cc-ccCCCCCCcEEeCCCCCCcc
Q psy12291 280 TFAGLTNLTALFLNNNLLRYLD---TK-AFEPMLHLKKLQLDSNKLQY 323 (404)
Q Consensus 280 ~~~~~~~L~~L~l~~n~i~~~~---~~-~~~~l~~L~~L~l~~n~l~~ 323 (404)
+...+.+..+....+.+.... .. .....+.++.+.+..|.+..
T Consensus 273 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 273 -LERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred -ccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccc
Confidence 233445555555555443211 11 12334455555555555444
No 29
>KOG3207|consensus
Probab=99.20 E-value=2e-12 Score=114.34 Aligned_cols=210 Identities=23% Similarity=0.196 Sum_probs=132.5
Q ss_pred CCCCCCEEEccCCcCcccCc-ccccCCCCCCEEeCCCCCCcccC--ccccCCCCCCcEEEccCCCCCcCCC-ccCCCCCC
Q psy12291 67 GLYKLTELKLRKNHLSELPG-KLFISTINLSTMDLSQNLIKTLP--STFFKGAIRLTVVQLSYNAIESLPA-NVFHDLIS 142 (404)
Q Consensus 67 ~~~~L~~L~l~~~~l~~~~~-~~~~~~~~L~~L~l~~n~l~~~~--~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~ 142 (404)
++.+|+...|.++.+...+. .....+++++.|||++|-+.... ......+++|+.|+++.|.+..... ..-..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 56778888888877765542 23366888888888888665322 1234567888888888887764332 11224567
Q ss_pred CCEEECCCCccccccccc-ccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccC-CCccCCCCCCCEEEC
Q psy12291 143 LEELDLSQNVLTSIQYGT-FSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIR-PGLFNYFKHLTFLEL 220 (404)
Q Consensus 143 L~~L~l~~~~l~~~~~~~-l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~-~~~~~~l~~L~~L~l 220 (404)
|+.|.++.|.+..-.... +..+|+|+.|++..|....+......-+..|+.|+|++|.+-..+ ....+.++.|..|++
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 888888888776433222 345678888888887533333333445567888888887765443 133566777777777
Q ss_pred CCCcCCCCChhhh------cCCCCCcEEECCCCCCcccCc-ccccCCCCCcEEECcCCCcccc
Q psy12291 221 SENWISSLNGDEF------SQLTSLKELHLGQNYIETIPA-GSFANLQSLEKLFLYSNNIQEL 276 (404)
Q Consensus 221 ~~~~~~~~~~~~~------~~l~~L~~L~l~~~~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~ 276 (404)
+.+.+..+..... ...++|++|++..|++.+.+. ..+..+++|+.|.+..|.+..-
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 7777765533222 345678888888887765542 2344566777777777766543
No 30
>KOG1909|consensus
Probab=99.20 E-value=1.4e-12 Score=112.12 Aligned_cols=133 Identities=25% Similarity=0.274 Sum_probs=73.5
Q ss_pred CCCCEEECCCCcCCCCCh----hhhcCCCCCcEEECCCCCCcccC----cccccCCCCCcEEECcCCCcccccc----cc
Q psy12291 213 KHLTFLELSENWISSLNG----DEFSQLTSLKELHLGQNYIETIP----AGSFANLQSLEKLFLYSNNIQELHA----GT 280 (404)
Q Consensus 213 ~~L~~L~l~~~~~~~~~~----~~~~~l~~L~~L~l~~~~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~----~~ 280 (404)
+.|+++....|++...+. ..|...+.|+.+.+..|.+..-. ...+.+++.|+.|+|.+|.++.-.. .+
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Laka 236 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKA 236 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHH
Confidence 445555555555444332 23344456666666666554211 1234556666666666666654322 34
Q ss_pred ccCCCCCCeeecccccccccCcccc-----CCCCCCcEEeCCCCCCcccCc----ccccCCCCCcEEEccCCcc
Q psy12291 281 FAGLTNLTALFLNNNLLRYLDTKAF-----EPMLHLKKLQLDSNKLQYLAT----DSLSLLPNLITLKLAKNPW 345 (404)
Q Consensus 281 ~~~~~~L~~L~l~~n~i~~~~~~~~-----~~l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~l~l~~Np~ 345 (404)
+..+++|++|++++|.++.-...++ ...|+|+.|.+.+|.++.-.. ..+...|.|..|+|++|.+
T Consensus 237 L~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 237 LSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred hcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 4555666777777666655443222 235677777777777664211 2234467778888888887
No 31
>KOG0531|consensus
Probab=99.19 E-value=2e-12 Score=121.21 Aligned_cols=263 Identities=30% Similarity=0.367 Sum_probs=192.3
Q ss_pred CCCEEEccCCcCcccCcccccCCCCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECC
Q psy12291 70 KLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLS 149 (404)
Q Consensus 70 ~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 149 (404)
.++.++...+.+...... ...+..++.+.+..|.+..+... +..+.+|..|++.+|.+..+... +..+++|+.|+++
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~~~~~-l~~~~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L~ls 126 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAKILNH-LSKLKSLEALDLYDNKIEKIENL-LSSLVNLQVLDLS 126 (414)
T ss_pred hhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhhhhcc-cccccceeeeeccccchhhcccc-hhhhhcchheecc
Confidence 344455544443333222 13466777788888888874332 66788999999999999988763 4568899999999
Q ss_pred CCcccccccccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccCC-CccCCCCCCCEEECCCCcCCCC
Q psy12291 150 QNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRP-GLFNYFKHLTFLELSENWISSL 228 (404)
Q Consensus 150 ~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~-~~~~~l~~L~~L~l~~~~~~~~ 228 (404)
+|.|..+. .+..++.|+.|++.+|.+..+.. +..++.|+.+++++|.+..+.. . ...+.+++.+.+.+|.+..+
T Consensus 127 ~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~~~--~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i 201 (414)
T KOG0531|consen 127 FNKITKLE--GLSTLTLLKELNLSGNLISDISG--LESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI 201 (414)
T ss_pred cccccccc--chhhccchhhheeccCcchhccC--CccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc
Confidence 99998876 45567779999999999998775 4568999999999999887755 2 46788899999999988776
Q ss_pred ChhhhcCCCCCcEEECCCCCCcccCcccccCCCC--CcEEECcCCCccccccccccCCCCCCeeecccccccccCccccC
Q psy12291 229 NGDEFSQLTSLKELHLGQNYIETIPAGSFANLQS--LEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFE 306 (404)
Q Consensus 229 ~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~--L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~ 306 (404)
.. +..+..+..+++..|.+..+.. +..+.. |+.+++.+|.+..++ ..+..+..+..+++.+|++..+.. +.
T Consensus 202 ~~--~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~~~~~--~~ 274 (414)
T KOG0531|consen 202 EG--LDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRISNLEG--LE 274 (414)
T ss_pred cc--hHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCcccccc-ccccccccccccchhhcccccccc--cc
Confidence 53 3344455566888888887664 233344 899999999998874 346678899999999999887643 44
Q ss_pred CCCCCcEEeCCCCCCccc---Cc-ccccCCCCCcEEEccCCcccc
Q psy12291 307 PMLHLKKLQLDSNKLQYL---AT-DSLSLLPNLITLKLAKNPWHC 347 (404)
Q Consensus 307 ~l~~L~~L~l~~n~l~~~---~~-~~~~~l~~L~~l~l~~Np~~C 347 (404)
..+.+..+....|.+... .. ......+.++.+.+.+||..-
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 275 RLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred ccchHHHhccCcchhcchhhhhccccccccccccccccccCcccc
Confidence 556777788888876632 11 124567888999999998754
No 32
>KOG1909|consensus
Probab=99.17 E-value=1.3e-12 Score=112.30 Aligned_cols=89 Identities=21% Similarity=0.219 Sum_probs=41.3
Q ss_pred hcCCCCCcEEECCCCCCcccCc----ccccCCCCCcEEECcCCCccccccccc-----cCCCCCCeeecccccccccCc-
Q psy12291 233 FSQLTSLKELHLGQNYIETIPA----GSFANLQSLEKLFLYSNNIQELHAGTF-----AGLTNLTALFLNNNLLRYLDT- 302 (404)
Q Consensus 233 ~~~l~~L~~L~l~~~~l~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~~~~L~~L~l~~n~i~~~~~- 302 (404)
+..+++|+.|++.+|.++.-.. ..++..+.|+.|++++|.++.-...+| ...|+|++|.+.+|.|+.-..
T Consensus 209 l~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~ 288 (382)
T KOG1909|consen 209 LEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAAL 288 (382)
T ss_pred HHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHH
Confidence 3344444444444444432211 123334455555555555544322211 224566666666665543211
Q ss_pred ---cccCCCCCCcEEeCCCCCC
Q psy12291 303 ---KAFEPMLHLKKLQLDSNKL 321 (404)
Q Consensus 303 ---~~~~~l~~L~~L~l~~n~l 321 (404)
......+.|..|+|++|++
T Consensus 289 ~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 289 ALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHhcchhhHHhcCCcccc
Confidence 2223356666667777666
No 33
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.15 E-value=5.7e-11 Score=111.22 Aligned_cols=199 Identities=32% Similarity=0.436 Sum_probs=148.0
Q ss_pred EEEccCCcCcccCcccccCCCCCCEEeCCCCCCcccCccccCCC-CCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCC
Q psy12291 73 ELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGA-IRLTVVQLSYNAIESLPANVFHDLISLEELDLSQN 151 (404)
Q Consensus 73 ~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~ 151 (404)
.+++..+.+..-... ....+.++.|++.+|.++.+++. ...+ .+|+.|++++|.+..++.. ...+++|+.|+++.|
T Consensus 97 ~l~~~~~~~~~~~~~-~~~~~~l~~L~l~~n~i~~i~~~-~~~~~~nL~~L~l~~N~i~~l~~~-~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNISE-LLELTNLTSLDLDNNNITDIPPL-IGLLKSNLKELDLSDNKIESLPSP-LRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCchh-hhcccceeEEecCCcccccCccc-cccchhhcccccccccchhhhhhh-hhccccccccccCCc
Confidence 577777776322222 23457788999999988888874 3334 2899999999988887522 467889999999999
Q ss_pred cccccccccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChh
Q psy12291 152 VLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGD 231 (404)
Q Consensus 152 ~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 231 (404)
++..++... ...+.|+.|++++|.+..++... .....|+++.+++|..... +..+..+.++..+.+..|.+...+ .
T Consensus 174 ~l~~l~~~~-~~~~~L~~L~ls~N~i~~l~~~~-~~~~~L~~l~~~~N~~~~~-~~~~~~~~~l~~l~l~~n~~~~~~-~ 249 (394)
T COG4886 174 DLSDLPKLL-SNLSNLNNLDLSGNKISDLPPEI-ELLSALEELDLSNNSIIEL-LSSLSNLKNLSGLELSNNKLEDLP-E 249 (394)
T ss_pred hhhhhhhhh-hhhhhhhheeccCCccccCchhh-hhhhhhhhhhhcCCcceec-chhhhhcccccccccCCceeeecc-c
Confidence 888876432 25678899999999998888742 3445688999998853333 344677788888888888776642 4
Q ss_pred hhcCCCCCcEEECCCCCCcccCcccccCCCCCcEEECcCCCcccccccc
Q psy12291 232 EFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGT 280 (404)
Q Consensus 232 ~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 280 (404)
.+..+++++.|++++|.+..++. +..+.+++.|+++++.+..+.+..
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 56778889999999999999886 778899999999999888776543
No 34
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.15 E-value=5.2e-11 Score=111.51 Aligned_cols=197 Identities=33% Similarity=0.445 Sum_probs=137.3
Q ss_pred EEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCC-CCCEEECCCCcccccccccccCCccCcEEeccCC
Q psy12291 97 TMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLI-SLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSN 175 (404)
Q Consensus 97 ~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~ 175 (404)
.+++..+.+..-... ....+.++.|++.+|.++.+++.. ..+. +|+.|+++.|.+..+. ..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~~~-~~~~~~l~~L~l~~n~i~~i~~~~-~~~~~nL~~L~l~~N~i~~l~-~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNISE-LLELTNLTSLDLDNNNITDIPPLI-GLLKSNLKELDLSDNKIESLP-SPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCchh-hhcccceeEEecCCcccccCcccc-ccchhhcccccccccchhhhh-hhhhccccccccccCCc
Confidence 577777776322222 334577888889888888887743 2332 7888888888887764 34667788888888888
Q ss_pred CCCCCCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcc
Q psy12291 176 RINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAG 255 (404)
Q Consensus 176 ~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~ 255 (404)
++..++... ...++|+.|++++|++..++.. ......|+++.+++|.....+ ..+..+.++..+.+.+|++..++.
T Consensus 174 ~l~~l~~~~-~~~~~L~~L~ls~N~i~~l~~~-~~~~~~L~~l~~~~N~~~~~~-~~~~~~~~l~~l~l~~n~~~~~~~- 249 (394)
T COG4886 174 DLSDLPKLL-SNLSNLNNLDLSGNKISDLPPE-IELLSALEELDLSNNSIIELL-SSLSNLKNLSGLELSNNKLEDLPE- 249 (394)
T ss_pred hhhhhhhhh-hhhhhhhheeccCCccccCchh-hhhhhhhhhhhhcCCcceecc-hhhhhcccccccccCCceeeeccc-
Confidence 888887642 3667888888888888777542 234455888888887533332 345666777777777777766433
Q ss_pred cccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCc
Q psy12291 256 SFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDT 302 (404)
Q Consensus 256 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~ 302 (404)
.+..+++++.|++++|.++.++. ++.+.+++.|++++|.+..+.+
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 46667778888888888887765 6677788888888877765544
No 35
>KOG0532|consensus
Probab=99.13 E-value=1.8e-12 Score=118.32 Aligned_cols=168 Identities=31% Similarity=0.419 Sum_probs=82.0
Q ss_pred EEeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCC
Q psy12291 169 RLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNY 248 (404)
Q Consensus 169 ~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~ 248 (404)
..+++.|++..++..+ ..+..|+.+.+..|.+..+ +..+.++..|.+++++.|++...+.. +..+ -|+.|-+++|+
T Consensus 79 ~aDlsrNR~~elp~~~-~~f~~Le~liLy~n~~r~i-p~~i~~L~~lt~l~ls~NqlS~lp~~-lC~l-pLkvli~sNNk 154 (722)
T KOG0532|consen 79 FADLSRNRFSELPEEA-CAFVSLESLILYHNCIRTI-PEAICNLEALTFLDLSSNQLSHLPDG-LCDL-PLKVLIVSNNK 154 (722)
T ss_pred hhhccccccccCchHH-HHHHHHHHHHHHhccceec-chhhhhhhHHHHhhhccchhhcCChh-hhcC-cceeEEEecCc
Confidence 3444444444444332 3334444444444444433 23344444555555555555444422 2222 25555555555
Q ss_pred CcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCccc
Q psy12291 249 IETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDS 328 (404)
Q Consensus 249 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 328 (404)
++.+|.+ ++..+.|..|+.+.|.+..++. .++++.+|+.|.++.|++.+++.+.. .-.|..||++.|++..+|. .
T Consensus 155 l~~lp~~-ig~~~tl~~ld~s~nei~slps-ql~~l~slr~l~vrRn~l~~lp~El~--~LpLi~lDfScNkis~iPv-~ 229 (722)
T KOG0532|consen 155 LTSLPEE-IGLLPTLAHLDVSKNEIQSLPS-QLGYLTSLRDLNVRRNHLEDLPEELC--SLPLIRLDFSCNKISYLPV-D 229 (722)
T ss_pred cccCCcc-cccchhHHHhhhhhhhhhhchH-HhhhHHHHHHHHHhhhhhhhCCHHHh--CCceeeeecccCceeecch-h
Confidence 5555542 3344555555555555555533 24455555555555555555544433 2245555555555555544 2
Q ss_pred ccCCCCCcEEEccCCcc
Q psy12291 329 LSLLPNLITLKLAKNPW 345 (404)
Q Consensus 329 ~~~l~~L~~l~l~~Np~ 345 (404)
|..|..|+.|-|.+||+
T Consensus 230 fr~m~~Lq~l~LenNPL 246 (722)
T KOG0532|consen 230 FRKMRHLQVLQLENNPL 246 (722)
T ss_pred hhhhhhheeeeeccCCC
Confidence 45555555555555555
No 36
>KOG4658|consensus
Probab=99.13 E-value=3.3e-11 Score=120.81 Aligned_cols=139 Identities=27% Similarity=0.352 Sum_probs=78.8
Q ss_pred CCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCc--CcccCcccccCCCCCCEEeCCCC-CCccc
Q psy12291 32 QDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNH--LSELPGKLFISTINLSTMDLSQN-LIKTL 108 (404)
Q Consensus 32 ~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~--l~~~~~~~~~~~~~L~~L~l~~n-~l~~~ 108 (404)
.++..+|..... ..++++.+-+|.+..+... ...+.|++|-+.+|. +..++...|..++.|++||+++| .+..+
T Consensus 511 ~~~~~~~~~~~~-~~~rr~s~~~~~~~~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~L 587 (889)
T KOG4658|consen 511 VGLSEIPQVKSW-NSVRRMSLMNNKIEHIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKL 587 (889)
T ss_pred cCccccccccch-hheeEEEEeccchhhccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcC
Confidence 344444443222 3566666666665544322 223356666666664 55666666666666666666665 45555
Q ss_pred CccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCC
Q psy12291 109 PSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSN 175 (404)
Q Consensus 109 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~ 175 (404)
|.. ++.+-+|++|+++++.+..+|.+ +.++..|.+|++..+......+.....+++|++|.+...
T Consensus 588 P~~-I~~Li~LryL~L~~t~I~~LP~~-l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 588 PSS-IGELVHLRYLDLSDTGISHLPSG-LGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred ChH-HhhhhhhhcccccCCCccccchH-HHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 554 55666666666666666666654 356666666666665433333344444666666666554
No 37
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.12 E-value=3.8e-11 Score=79.72 Aligned_cols=59 Identities=36% Similarity=0.510 Sum_probs=26.3
Q ss_pred CCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCC
Q psy12291 262 SLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNK 320 (404)
Q Consensus 262 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 320 (404)
+|+.|++++|+++.++..+|.++++|++|++++|+++.+++++|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444444444444444444444444444444444444444444444443
No 38
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.10 E-value=5.9e-11 Score=78.76 Aligned_cols=61 Identities=36% Similarity=0.503 Sum_probs=58.5
Q ss_pred CCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCcccccCCCCCcEEEccCCcc
Q psy12291 285 TNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPW 345 (404)
Q Consensus 285 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~Np~ 345 (404)
|+|++|++++|+++.++...|..+++|++|++++|.++.++++.+..+++|+.|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999999999999999999999999999999999999999999999999999999974
No 39
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=99.08 E-value=1e-10 Score=124.69 Aligned_cols=83 Identities=28% Similarity=0.636 Sum_probs=72.8
Q ss_pred eCCCCCCcccCcccccCCCCCcEEEccCCccccccCcHHHHHHHHhccCcccC-CCCeeCCCCCCCCCcccCCCCcCC-C
Q psy12291 315 QLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCAILYMARWLRANRRKVWD-SKPTCRGPGNLGGKSVEDMSFDDL-C 392 (404)
Q Consensus 315 ~l~~n~l~~~~~~~~~~l~~L~~l~l~~Np~~C~c~~~~~~~~~~~~~~~~~~-~~~~C~~p~~l~~~~l~~~~~~~~-C 392 (404)
||++|+|+.++...|..+++|+.|+|++|||+|||.+.||..|++.....+.. ...+|++|+.++|+++.++...++ |
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CDC~L~WL~~WL~~~~v~v~~~~~i~CasP~~LrG~~L~~l~~~d~~C 80 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECDCGLARLPRWAEEKGVKVRQPEAALCAGPGALAGQPLLGIPLLDSGC 80 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccccccccHHHHHHHHhcCccccCCcccCCCCChHHCCCCcccCCcccCCC
Confidence 68899999999999999999999999999999999999999999988655433 367899999999999999987765 8
Q ss_pred Ccccc
Q psy12291 393 EGQWA 397 (404)
Q Consensus 393 ~~~~~ 397 (404)
+....
T Consensus 81 ~~~y~ 85 (2740)
T TIGR00864 81 DEEYV 85 (2740)
T ss_pred CCcce
Confidence 76654
No 40
>KOG4658|consensus
Probab=99.06 E-value=1.2e-10 Score=116.98 Aligned_cols=288 Identities=21% Similarity=0.191 Sum_probs=167.6
Q ss_pred CceEEecCCCCCccCCCCCCCCCeeEEEcCCCC--CcccChhhcCCCCCCCEEEccCC-cCcccCcccccCCCCCCEEeC
Q psy12291 24 IHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQ--LSTLSKDAFTGLYKLTELKLRKN-HLSELPGKLFISTINLSTMDL 100 (404)
Q Consensus 24 ~~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~--i~~~~~~~~~~~~~L~~L~l~~~-~l~~~~~~~~~~~~~L~~L~l 100 (404)
.+.+...++.+..++.....+ .+++|-+..|. +..+....|..++.|+.|||++| .+.++|..+ +.+-+|++|++
T Consensus 525 ~rr~s~~~~~~~~~~~~~~~~-~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I-~~Li~LryL~L 602 (889)
T KOG4658|consen 525 VRRMSLMNNKIEHIAGSSENP-KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSI-GELVHLRYLDL 602 (889)
T ss_pred eeEEEEeccchhhccCCCCCC-ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHH-hhhhhhhcccc
Confidence 455666777787777765444 79999999986 78888888999999999999977 566777654 88999999999
Q ss_pred CCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcc--cccccccccCCccCcEEeccCCCCC
Q psy12291 101 SQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVL--TSIQYGTFSGMYSLKRLKLQSNRIN 178 (404)
Q Consensus 101 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l--~~~~~~~l~~l~~L~~L~l~~~~l~ 178 (404)
++..++.+|.+ +.++..|.+|++..+......++....+++|++|.+..... .......+..+.+|+.+.......
T Consensus 603 ~~t~I~~LP~~-l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~- 680 (889)
T KOG4658|consen 603 SDTGISHLPSG-LGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV- 680 (889)
T ss_pred cCCCccccchH-HHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh-
Confidence 99999999987 88999999999998765544466667789999999876541 111222333444455444433322
Q ss_pred CCCCCccCCCCCCC----eEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcC------CCCCcEEECCCCC
Q psy12291 179 QLPPGIFDDLKYLD----FLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQ------LTSLKELHLGQNY 248 (404)
Q Consensus 179 ~~~~~~~~~l~~L~----~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~------l~~L~~L~l~~~~ 248 (404)
.+... +..+..|. .+.+.++.. ......+..+.+|+.|.+.++............ ++++..+.+.++.
T Consensus 681 ~~~e~-l~~~~~L~~~~~~l~~~~~~~-~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~ 758 (889)
T KOG4658|consen 681 LLLED-LLGMTRLRSLLQSLSIEGCSK-RTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCH 758 (889)
T ss_pred HhHhh-hhhhHHHHHHhHhhhhccccc-ceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccc
Confidence 11111 12223332 222222221 122344566777777777777665432211111 2233333333332
Q ss_pred CcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccC-ccccCCCCCCcEEeCCC
Q psy12291 249 IETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLD-TKAFEPMLHLKKLQLDS 318 (404)
Q Consensus 249 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~-~~~~~~l~~L~~L~l~~ 318 (404)
....+. +....++|+.|.+..+....-+......+..+..+.+..+.+.... ....+.++++..+.+..
T Consensus 759 ~~r~l~-~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~ 828 (889)
T KOG4658|consen 759 MLRDLT-WLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSF 828 (889)
T ss_pred cccccc-hhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCc
Confidence 222222 1223477777777776554433333334444444344444333331 22333344444444433
No 41
>KOG1859|consensus
Probab=99.01 E-value=2.6e-12 Score=120.31 Aligned_cols=129 Identities=28% Similarity=0.365 Sum_probs=89.2
Q ss_pred CCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecc
Q psy12291 214 HLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLN 293 (404)
Q Consensus 214 ~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~ 293 (404)
.|.+.+++.|.+..++ .++.-++.|+.|+++.|++.++. .+..+++|++|||++|.++.++.-...++. |+.|.++
T Consensus 165 ~L~~a~fsyN~L~~mD-~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMD-ESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHHhHH-HHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 4555666666665554 35556667777777777777766 366777777777777777777654444454 8888888
Q ss_pred cccccccCccccCCCCCCcEEeCCCCCCcccCc-ccccCCCCCcEEEccCCccccc
Q psy12291 294 NNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLAT-DSLSLLPNLITLKLAKNPWHCD 348 (404)
Q Consensus 294 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~l~l~~Np~~C~ 348 (404)
+|.++.+ ..+.++.+|+.||+++|-|.+... ..+..+..|+.|+|.|||+.|.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 8877766 345667788888888887765432 2345567888999999999775
No 42
>KOG0532|consensus
Probab=98.96 E-value=1.8e-11 Score=111.92 Aligned_cols=173 Identities=30% Similarity=0.392 Sum_probs=89.3
Q ss_pred CCEEEccCCcCcccCcccccCCCCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCC
Q psy12291 71 LTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQ 150 (404)
Q Consensus 71 L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 150 (404)
-...+++.|++..+|..+ ..+..|+.+.+..|.+..+|.. +.++..|..|+|+.|++..++...+ . --|+.|-+++
T Consensus 77 t~~aDlsrNR~~elp~~~-~~f~~Le~liLy~n~~r~ip~~-i~~L~~lt~l~ls~NqlS~lp~~lC-~-lpLkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFSELPEEA-CAFVSLESLILYHNCIRTIPEA-ICNLEALTFLDLSSNQLSHLPDGLC-D-LPLKVLIVSN 152 (722)
T ss_pred hhhhhccccccccCchHH-HHHHHHHHHHHHhccceecchh-hhhhhHHHHhhhccchhhcCChhhh-c-CcceeEEEec
Confidence 344555555555555442 4444555555666655555544 4455556666666666655555432 1 2455566666
Q ss_pred CcccccccccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCCh
Q psy12291 151 NVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNG 230 (404)
Q Consensus 151 ~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~ 230 (404)
|+++.++ ..++....|.+|+.+.|.+..+++. +..+.+|+.|.+..|++..++++.. .+ .|..||++.|++..++
T Consensus 153 Nkl~~lp-~~ig~~~tl~~ld~s~nei~slpsq-l~~l~slr~l~vrRn~l~~lp~El~-~L-pLi~lDfScNkis~iP- 227 (722)
T KOG0532|consen 153 NKLTSLP-EEIGLLPTLAHLDVSKNEIQSLPSQ-LGYLTSLRDLNVRRNHLEDLPEELC-SL-PLIRLDFSCNKISYLP- 227 (722)
T ss_pred CccccCC-cccccchhHHHhhhhhhhhhhchHH-hhhHHHHHHHHHhhhhhhhCCHHHh-CC-ceeeeecccCceeecc-
Confidence 6555544 2334455555666666665555544 2555555555555555554433322 22 2445555555555444
Q ss_pred hhhcCCCCCcEEECCCCCCccc
Q psy12291 231 DEFSQLTSLKELHLGQNYIETI 252 (404)
Q Consensus 231 ~~~~~l~~L~~L~l~~~~l~~~ 252 (404)
-.|..|..|++|-|.+|.+..-
T Consensus 228 v~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 228 VDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred hhhhhhhhheeeeeccCCCCCC
Confidence 2344555555555555554443
No 43
>PLN03150 hypothetical protein; Provisional
Probab=98.89 E-value=4.1e-09 Score=103.54 Aligned_cols=112 Identities=19% Similarity=0.227 Sum_probs=92.3
Q ss_pred CCcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCC
Q psy12291 238 SLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLD 317 (404)
Q Consensus 238 ~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 317 (404)
.++.|+++++.+....+..+..+++|+.|+|++|.+....+..+..+++|+.|+|++|+++...+..+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37788999998886655578889999999999999987666678889999999999999998778888899999999999
Q ss_pred CCCCcccCcccccC-CCCCcEEEccCCcccccc
Q psy12291 318 SNKLQYLATDSLSL-LPNLITLKLAKNPWHCDC 349 (404)
Q Consensus 318 ~n~l~~~~~~~~~~-l~~L~~l~l~~Np~~C~c 349 (404)
+|++++..+..+.. ..++..+++.+|+..|.+
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~ 531 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGI 531 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCC
Confidence 99998765555544 346778899999987754
No 44
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.83 E-value=1.4e-08 Score=79.00 Aligned_cols=126 Identities=19% Similarity=0.413 Sum_probs=64.8
Q ss_pred cChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCC
Q psy12291 60 LSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHD 139 (404)
Q Consensus 60 ~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 139 (404)
+...+|.++.+|+.+.+.. .+..++...|..+++|+.+.+.++ +..++..+|.+++.++.+.+.. .+..++...|..
T Consensus 3 i~~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~ 79 (129)
T PF13306_consen 3 IGNNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSN 79 (129)
T ss_dssp E-TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT
T ss_pred ECHHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccc
Confidence 4455677777777777764 566777777777777777777664 6667766777776777777755 555666666766
Q ss_pred CCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCCCccCCCCCC
Q psy12291 140 LISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYL 191 (404)
Q Consensus 140 l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L 191 (404)
+++|+.+.+..+ +..+....|.++ +|+.+.+.. .+..++...|.++++|
T Consensus 80 ~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 80 CTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp -TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 777777777654 556666666665 777777665 5566666666665554
No 45
>PLN03150 hypothetical protein; Provisional
Probab=98.81 E-value=2.6e-08 Score=97.94 Aligned_cols=122 Identities=16% Similarity=0.141 Sum_probs=86.5
Q ss_pred CCceEEecCCCCCccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCC
Q psy12291 23 EIHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQ 102 (404)
Q Consensus 23 ~~~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~ 102 (404)
.+..+.|...... ....++.|++++|.+....+..+..+++|+.|+|++|.+.+..+..+..+++|++|++++
T Consensus 403 ~w~Gv~C~~~~~~-------~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~ 475 (623)
T PLN03150 403 PWSGADCQFDSTK-------GKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSY 475 (623)
T ss_pred ccccceeeccCCC-------CceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCC
Confidence 3778888632111 112488999999999887788899999999999999998854444568899999999999
Q ss_pred CCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCC-CCCCCEEECCCC
Q psy12291 103 NLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHD-LISLEELDLSQN 151 (404)
Q Consensus 103 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~~ 151 (404)
|.+....+..+.++++|+.|++++|.+....+..+.. ..++..+++.+|
T Consensus 476 N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N 525 (623)
T PLN03150 476 NSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525 (623)
T ss_pred CCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCC
Confidence 9888544455788888888888888877433322322 224445555554
No 46
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.73 E-value=3.6e-08 Score=76.65 Aligned_cols=124 Identities=23% Similarity=0.376 Sum_probs=54.0
Q ss_pred cCcccccCCCCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccC
Q psy12291 84 LPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSG 163 (404)
Q Consensus 84 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~ 163 (404)
++..+|.++.+|+.+.+.. .+..++...|.++.+|+.+.+..+ +..++...|.++++++.+.+.. .+..+....|..
T Consensus 3 i~~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~ 79 (129)
T PF13306_consen 3 IGNNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSN 79 (129)
T ss_dssp E-TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT
T ss_pred ECHHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccc
Confidence 4555666666666666653 455666666666666666666553 5566666666665666666644 444455555555
Q ss_pred CccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccCCCccCCCC
Q psy12291 164 MYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFK 213 (404)
Q Consensus 164 l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~ 213 (404)
+++|+.+.+..+ +..++...|... +++.+.+.. .+..+....|.+++
T Consensus 80 ~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~ 126 (129)
T PF13306_consen 80 CTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCT 126 (129)
T ss_dssp -TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG---
T ss_pred cccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccc
Confidence 566666665443 444555555554 555555543 33333333344333
No 47
>KOG1859|consensus
Probab=98.65 E-value=3e-10 Score=106.85 Aligned_cols=178 Identities=24% Similarity=0.265 Sum_probs=120.0
Q ss_pred CCCCCCEEECCCCcccccccccccCC-ccCcEEeccCCC----------CCCCCCCccCCCCCCCeEecCCCcCcccCCC
Q psy12291 139 DLISLEELDLSQNVLTSIQYGTFSGM-YSLKRLKLQSNR----------INQLPPGIFDDLKYLDFLSLRNNRLSFIRPG 207 (404)
Q Consensus 139 ~l~~L~~L~l~~~~l~~~~~~~l~~l-~~L~~L~l~~~~----------l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 207 (404)
.+..|+.|.++++++.... .+..+ ..|++|...+.- ...+... +. -..|.+.+.+.|.+..+ ..
T Consensus 107 pF~sLr~LElrg~~L~~~~--GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns-~~-Wn~L~~a~fsyN~L~~m-D~ 181 (1096)
T KOG1859|consen 107 PFRSLRVLELRGCDLSTAK--GLQELRHQLEKLICHNSLDALRHVFASCGGDISNS-PV-WNKLATASFSYNRLVLM-DE 181 (1096)
T ss_pred cccceeeEEecCcchhhhh--hhHHHHHhhhhhhhhccHHHHHHHHHHhccccccc-hh-hhhHhhhhcchhhHHhH-HH
Confidence 4567888888887765421 11111 245554433310 0111111 11 13467777788877655 35
Q ss_pred ccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCC
Q psy12291 208 LFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNL 287 (404)
Q Consensus 208 ~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L 287 (404)
.+.-++.++.|+|+.|++..+. .+..+++|++||+++|.+..+|.-....+ +|+.|.+++|.++.+.. +.++.+|
T Consensus 182 SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrnN~l~tL~g--ie~LksL 256 (1096)
T KOG1859|consen 182 SLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRNNALTTLRG--IENLKSL 256 (1096)
T ss_pred HHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhh-hheeeeecccHHHhhhh--HHhhhhh
Confidence 5677888999999999988876 67888999999999999988886333333 49999999998888754 5678899
Q ss_pred CeeecccccccccCc-cccCCCCCCcEEeCCCCCCcccCc
Q psy12291 288 TALFLNNNLLRYLDT-KAFEPMLHLKKLQLDSNKLQYLAT 326 (404)
Q Consensus 288 ~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~ 326 (404)
+.||+++|-|..... ..+..+..|+.|.|.+|.+-.-+.
T Consensus 257 ~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p~ 296 (1096)
T KOG1859|consen 257 YGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAPW 296 (1096)
T ss_pred hccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCHH
Confidence 999999998776533 344556788899999998865443
No 48
>smart00082 LRRCT Leucine rich repeat C-terminal domain.
Probab=98.58 E-value=2.7e-08 Score=63.21 Aligned_cols=49 Identities=29% Similarity=0.728 Sum_probs=38.5
Q ss_pred CccccccCcHHHHHHHHhccCcccCCCCeeCCCCCCCCCcccCCCCcCC-C
Q psy12291 343 NPWHCDCAILYMARWLRANRRKVWDSKPTCRGPGNLGGKSVEDMSFDDL-C 392 (404)
Q Consensus 343 Np~~C~c~~~~~~~~~~~~~~~~~~~~~~C~~p~~l~~~~l~~~~~~~~-C 392 (404)
|||.|||.+.||..|+.+..........+|++|+.++ .++.++..+++ |
T Consensus 1 NP~~CdC~l~~~~~w~~~~~~~~~~~~~~C~~P~~~~-~~l~~~~~~~~~C 50 (51)
T smart00082 1 NPFICDCELRWLLRWLQANEHLQDPVSLRCASPSSLR-GPLLELLHSEFKC 50 (51)
T ss_pred CCccCcCCchHHHHHHHhCCccCCCCCCEeCCcHHHH-hHHHcCCHhhCCC
Confidence 8999999999999999883222223379999999998 66888876554 6
No 49
>KOG1644|consensus
Probab=98.55 E-value=1.5e-07 Score=75.58 Aligned_cols=104 Identities=20% Similarity=0.256 Sum_probs=57.3
Q ss_pred CCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCccccccc-ccccCCccCcEEe
Q psy12291 93 INLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQY-GTFSGMYSLKRLK 171 (404)
Q Consensus 93 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~-~~l~~l~~L~~L~ 171 (404)
.+...+|+++|.+..++. |..++.|.+|.+.+|.|+.|.+..-..+++|+.|.+.+|.+..+.. ..+..+++|++|.
T Consensus 42 d~~d~iDLtdNdl~~l~~--lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRKLDN--LPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred cccceecccccchhhccc--CCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 345556666666655544 5566666666666666666655544445566666666665554431 2344556666666
Q ss_pred ccCCCCCCCCC---CccCCCCCCCeEecCC
Q psy12291 172 LQSNRINQLPP---GIFDDLKYLDFLSLRN 198 (404)
Q Consensus 172 l~~~~l~~~~~---~~~~~l~~L~~L~l~~ 198 (404)
+-+|.++.... ..+..+++|++|+..+
T Consensus 120 ll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 120 LLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred ecCCchhcccCceeEEEEecCcceEeehhh
Confidence 66665543321 2234455555555544
No 50
>KOG4579|consensus
Probab=98.52 E-value=3.6e-09 Score=79.23 Aligned_cols=134 Identities=21% Similarity=0.238 Sum_probs=97.0
Q ss_pred CCCEEECCCCcCCCCCh--hhhcCCCCCcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeee
Q psy12291 214 HLTFLELSENWISSLNG--DEFSQLTSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALF 291 (404)
Q Consensus 214 ~L~~L~l~~~~~~~~~~--~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ 291 (404)
.+..++++.+.+..+.. ..+.....|+..++++|.+.++|+..-..++.++.|++++|.|.+++.. +..++.|+.|+
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~lN 106 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSLN 106 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhcc
Confidence 34556777776664432 2233445677789999999988876555667889999999999999877 88899999999
Q ss_pred cccccccccCccccCCCCCCcEEeCCCCCCcccCcccccCCCCCcEEEccCCccccccC
Q psy12291 292 LNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLSLLPNLITLKLAKNPWHCDCA 350 (404)
Q Consensus 292 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~Np~~C~c~ 350 (404)
++.|.+...+.- +..+.++..|+..+|.+..++.+.+. -...-.+++.++||.-.|.
T Consensus 107 l~~N~l~~~p~v-i~~L~~l~~Lds~~na~~eid~dl~~-s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 107 LRFNPLNAEPRV-IAPLIKLDMLDSPENARAEIDVDLFY-SSLPALIKLGNEPLGDETK 163 (177)
T ss_pred cccCccccchHH-HHHHHhHHHhcCCCCccccCcHHHhc-cccHHHHHhcCCcccccCc
Confidence 999988877443 44488888999999999988877332 2222344567888865554
No 51
>KOG2982|consensus
Probab=98.51 E-value=2.9e-08 Score=84.19 Aligned_cols=223 Identities=21% Similarity=0.205 Sum_probs=119.8
Q ss_pred CCCCEEEccCCcCcccCcc-cc-cCCCCCCEEeCCCCCCcc---cCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCC
Q psy12291 69 YKLTELKLRKNHLSELPGK-LF-ISTINLSTMDLSQNLIKT---LPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISL 143 (404)
Q Consensus 69 ~~L~~L~l~~~~l~~~~~~-~~-~~~~~L~~L~l~~n~l~~---~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 143 (404)
..+..|.+.++.|..+... .| ..++.++.+|+.+|.|+. |. ..+.++|.|++|+++.|++.......-....+|
T Consensus 45 ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~-~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl 123 (418)
T KOG2982|consen 45 RALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIG-AILEQLPALTTLNLSCNSLSSDIKSLPLPLKNL 123 (418)
T ss_pred cchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHH-HHHhcCccceEeeccCCcCCCccccCcccccce
Confidence 3445556666665543321 11 345677778888887763 22 235677888888888887764322211245677
Q ss_pred CEEECCCCccccccc-ccccCCccCcEEeccCCCCCCC--CCCccCC-CCCCCeEecCCCcCccc--CCCccCCCCCCCE
Q psy12291 144 EELDLSQNVLTSIQY-GTFSGMYSLKRLKLQSNRINQL--PPGIFDD-LKYLDFLSLRNNRLSFI--RPGLFNYFKHLTF 217 (404)
Q Consensus 144 ~~L~l~~~~l~~~~~-~~l~~l~~L~~L~l~~~~l~~~--~~~~~~~-l~~L~~L~l~~~~~~~~--~~~~~~~l~~L~~ 217 (404)
+.|.+.+..+..... ..+..+|.+++|.++.|++..+ .+..... -+.+.++...+|....- ....-.-++++..
T Consensus 124 ~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~s 203 (418)
T KOG2982|consen 124 RVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNS 203 (418)
T ss_pred EEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchh
Confidence 888887776543322 2345667777887777754321 1111111 13455555555532210 0011223456666
Q ss_pred EECCCCcCCCCCh-hhhcCCCCCcEEECCCCCCcccCc-ccccCCCCCcEEECcCCCcccccc------ccccCCCCCCe
Q psy12291 218 LELSENWISSLNG-DEFSQLTSLKELHLGQNYIETIPA-GSFANLQSLEKLFLYSNNIQELHA------GTFAGLTNLTA 289 (404)
Q Consensus 218 L~l~~~~~~~~~~-~~~~~l~~L~~L~l~~~~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~------~~~~~~~~L~~ 289 (404)
+.+..+.+..... +.+..+|.+..|.++.+++..... +.+..++.|..|.++++.+.+-.. -.++.+++++.
T Consensus 204 v~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~v 283 (418)
T KOG2982|consen 204 VFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQV 283 (418)
T ss_pred eeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEE
Confidence 6666665554322 334455666677777776654432 345566777777777776654211 12345566666
Q ss_pred eec
Q psy12291 290 LFL 292 (404)
Q Consensus 290 L~l 292 (404)
|+=
T Consensus 284 LNG 286 (418)
T KOG2982|consen 284 LNG 286 (418)
T ss_pred ecC
Confidence 543
No 52
>KOG1644|consensus
Probab=98.50 E-value=2e-07 Score=74.83 Aligned_cols=105 Identities=26% Similarity=0.327 Sum_probs=79.6
Q ss_pred CCcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCc-cccCCCCCCcEEeC
Q psy12291 238 SLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDT-KAFEPMLHLKKLQL 316 (404)
Q Consensus 238 ~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l 316 (404)
....+++++|.+..++. |+.++.|.+|.+.+|.|+.|.+..-..++.|..|.|.+|.|..+.. ..+..+|.|++|.+
T Consensus 43 ~~d~iDLtdNdl~~l~~--lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKLDN--LPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhccc--CCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 45677788887777664 7778888888888888888877665667888888888888777643 56677888888888
Q ss_pred CCCCCcccCc---ccccCCCCCcEEEccCCc
Q psy12291 317 DSNKLQYLAT---DSLSLLPNLITLKLAKNP 344 (404)
Q Consensus 317 ~~n~l~~~~~---~~~~~l~~L~~l~l~~Np 344 (404)
-+|.++.-.. +.+..+|+|+.||+.+-.
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~kVt 151 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQKVT 151 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehhhhh
Confidence 8888876544 346678899999887643
No 53
>KOG2982|consensus
Probab=98.28 E-value=1.6e-07 Score=79.86 Aligned_cols=223 Identities=18% Similarity=0.217 Sum_probs=142.5
Q ss_pred CcEEEccCCCCCcCCCc-cC-CCCCCCCEEECCCCccccccc--ccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeE
Q psy12291 119 LTVVQLSYNAIESLPAN-VF-HDLISLEELDLSQNVLTSIQY--GTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFL 194 (404)
Q Consensus 119 L~~L~l~~n~l~~~~~~-~~-~~l~~L~~L~l~~~~l~~~~~--~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L 194 (404)
+..+.+.++.+..+... .| ...+.++.+++.+|.+..... .-+.++|.|+.|+++.|.+.......-....+|++|
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~l 126 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVL 126 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEE
Confidence 44555566655544321 11 235678999999998875432 335788999999999998875332221356789999
Q ss_pred ecCCCcCcccC-CCccCCCCCCCEEECCCCcCCCC--ChhhhcCC-CCCcEEECCCCCCcccCc--ccccCCCCCcEEEC
Q psy12291 195 SLRNNRLSFIR-PGLFNYFKHLTFLELSENWISSL--NGDEFSQL-TSLKELHLGQNYIETIPA--GSFANLQSLEKLFL 268 (404)
Q Consensus 195 ~l~~~~~~~~~-~~~~~~l~~L~~L~l~~~~~~~~--~~~~~~~l-~~L~~L~l~~~~l~~~~~--~~~~~l~~L~~L~L 268 (404)
.+.+..+.... ...+..+|.++.|.++.|.+..+ +....... +.+++|+..+|....... ..-..+|++..+.+
T Consensus 127 VLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v 206 (418)
T KOG2982|consen 127 VLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFV 206 (418)
T ss_pred EEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheee
Confidence 99888776432 23456778888888888844322 11222222 356677777764432110 01223578888888
Q ss_pred cCCCcccccc-ccccCCCCCCeeecccccccccCc-cccCCCCCCcEEeCCCCCCcccCcc------cccCCCCCcEEEc
Q psy12291 269 YSNNIQELHA-GTFAGLTNLTALFLNNNLLRYLDT-KAFEPMLHLKKLQLDSNKLQYLATD------SLSLLPNLITLKL 340 (404)
Q Consensus 269 ~~n~l~~~~~-~~~~~~~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~l~l 340 (404)
..|.+.+... ..+..+|.+..|+|+.++|..... ..+.+++.|.-|.++++.+...-.. .++.+++++.|+=
T Consensus 207 ~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLNG 286 (418)
T KOG2982|consen 207 CEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLNG 286 (418)
T ss_pred ecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEecC
Confidence 8888877644 345667788888999998887654 6778888999999999887753322 2455667666554
Q ss_pred c
Q psy12291 341 A 341 (404)
Q Consensus 341 ~ 341 (404)
+
T Consensus 287 s 287 (418)
T KOG2982|consen 287 S 287 (418)
T ss_pred c
Confidence 3
No 54
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.21 E-value=1.3e-07 Score=79.37 Aligned_cols=218 Identities=18% Similarity=0.216 Sum_probs=102.6
Q ss_pred CeeEEEcCCCCCcccChhh----cCCCCCCCEEEccCCcCc----ccC------cccccCCCCCCEEeCCCCCCcc-cCc
Q psy12291 46 DIRVIDLGINQLSTLSKDA----FTGLYKLTELKLRKNHLS----ELP------GKLFISTINLSTMDLSQNLIKT-LPS 110 (404)
Q Consensus 46 ~l~~L~l~~~~i~~~~~~~----~~~~~~L~~L~l~~~~l~----~~~------~~~~~~~~~L~~L~l~~n~l~~-~~~ 110 (404)
.++.+++++|.|.+-.+.. +++-.+|+..++++-... .++ ..++.+|++|+..++|+|.+.. .|+
T Consensus 31 ~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~~e 110 (388)
T COG5238 31 ELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEFPE 110 (388)
T ss_pred ceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcccch
Confidence 4666666666665443322 334455665555543221 111 1122345556666666654431 111
Q ss_pred ---cccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCCcccccccccccCCccCcEEeccCCCCCCCCCC----
Q psy12291 111 ---TFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLPPG---- 183 (404)
Q Consensus 111 ---~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~---- 183 (404)
..+++...|.+|.+++|.+..+.+..++. .|.+| ..| ...+.-|.|+.+....|++..-+..
T Consensus 111 ~L~d~is~~t~l~HL~l~NnGlGp~aG~rigk--al~~l--a~n-------KKaa~kp~Le~vicgrNRlengs~~~~a~ 179 (388)
T COG5238 111 ELGDLISSSTDLVHLKLNNNGLGPIAGGRIGK--ALFHL--AYN-------KKAADKPKLEVVICGRNRLENGSKELSAA 179 (388)
T ss_pred HHHHHHhcCCCceeEEeecCCCCccchhHHHH--HHHHH--HHH-------hhhccCCCceEEEeccchhccCcHHHHHH
Confidence 22344455555555555554443322210 00000 000 0112345666666666665543321
Q ss_pred ccCCCCCCCeEecCCCcCcccC-----CCccCCCCCCCEEECCCCcCCCCCh----hhhcCCCCCcEEECCCCCCcccCc
Q psy12291 184 IFDDLKYLDFLSLRNNRLSFIR-----PGLFNYFKHLTFLELSENWISSLNG----DEFSQLTSLKELHLGQNYIETIPA 254 (404)
Q Consensus 184 ~~~~l~~L~~L~l~~~~~~~~~-----~~~~~~l~~L~~L~l~~~~~~~~~~----~~~~~l~~L~~L~l~~~~l~~~~~ 254 (404)
.+..-.+|+.+.+..|.+..-. ...+..+++|+.|++.+|.++.... .++..++.|+.|.+.+|-++.-..
T Consensus 180 ~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~ 259 (388)
T COG5238 180 LLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGV 259 (388)
T ss_pred HHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccH
Confidence 1222245666666666554210 0112335677777777776665443 334555667777777776654332
Q ss_pred cc----c--cCCCCCcEEECcCCCcc
Q psy12291 255 GS----F--ANLQSLEKLFLYSNNIQ 274 (404)
Q Consensus 255 ~~----~--~~l~~L~~L~L~~n~l~ 274 (404)
.. | ...|+|+.|...+|.+.
T Consensus 260 ~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 260 KSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred HHHHHHhhhhcCCCccccccchhhhc
Confidence 11 1 12366666666666543
No 55
>KOG2120|consensus
Probab=98.19 E-value=2.2e-08 Score=84.96 Aligned_cols=85 Identities=20% Similarity=0.161 Sum_probs=44.9
Q ss_pred CCCEEeCCCCCCccc-CccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEECCCC-cccccccc-cccCCccCcEE
Q psy12291 94 NLSTMDLSQNLIKTL-PSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDLSQN-VLTSIQYG-TFSGMYSLKRL 170 (404)
Q Consensus 94 ~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~-~l~~~~~~-~l~~l~~L~~L 170 (404)
.|++|||++..|+.- -...++.+.+|+.|.+.++++..-....+..-.+|+.|+++.+ .++..... .+.+++.|.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 466777776665521 1122445666666666666665432223344556666666655 23322211 23456666666
Q ss_pred eccCCCCC
Q psy12291 171 KLQSNRIN 178 (404)
Q Consensus 171 ~l~~~~l~ 178 (404)
++++|.+.
T Consensus 266 NlsWc~l~ 273 (419)
T KOG2120|consen 266 NLSWCFLF 273 (419)
T ss_pred CchHhhcc
Confidence 66666543
No 56
>KOG2120|consensus
Probab=98.18 E-value=5.7e-09 Score=88.44 Aligned_cols=152 Identities=14% Similarity=0.151 Sum_probs=81.5
Q ss_pred CceEEecCCCCCccCCCCCCCCCeeEEEcCCCCCccc-ChhhcCCC-CCCCEEEccCCcCcc-cCcccccCCCCCCEEeC
Q psy12291 24 IHTLSCWKQDMEELPFDQIIPVDIRVIDLGINQLSTL-SKDAFTGL-YKLTELKLRKNHLSE-LPGKLFISTINLSTMDL 100 (404)
Q Consensus 24 ~~~~~~~~~~l~~ip~~~~~~~~l~~L~l~~~~i~~~-~~~~~~~~-~~L~~L~l~~~~l~~-~~~~~~~~~~~L~~L~l 100 (404)
++.++..+.++...-.......++..+.+...-+..- ....+.-+ ..|++|||++..|+. --...+..+.+|+.|.+
T Consensus 138 W~~lDl~~r~i~p~~l~~l~~rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~lSl 217 (419)
T KOG2120|consen 138 WQTLDLTGRNIHPDVLGRLLSRGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKNLSL 217 (419)
T ss_pred eeeeccCCCccChhHHHHHHhCCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhhccc
Confidence 5666666666654433322333455554443222111 01111111 347788888777662 12234566777888888
Q ss_pred CCCCCcccCccccCCCCCCcEEEccCC-CCCcCC-CccCCCCCCCCEEECCCCcccccccc-cccC-CccCcEEeccCC
Q psy12291 101 SQNLIKTLPSTFFKGAIRLTVVQLSYN-AIESLP-ANVFHDLISLEELDLSQNVLTSIQYG-TFSG-MYSLKRLKLQSN 175 (404)
Q Consensus 101 ~~n~l~~~~~~~~~~~~~L~~L~l~~n-~l~~~~-~~~~~~l~~L~~L~l~~~~l~~~~~~-~l~~-l~~L~~L~l~~~ 175 (404)
.++++.+--...+..-.+|+.|+++.+ .++... .-.+..++.|..|+++.|.+...... ...+ -.+|+.|+++++
T Consensus 218 Eg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~ 296 (419)
T KOG2120|consen 218 EGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGY 296 (419)
T ss_pred cccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhh
Confidence 888776533333556677888888764 344332 12356677888888888765422111 1111 135666666664
No 57
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.16 E-value=2e-06 Score=52.17 Aligned_cols=38 Identities=29% Similarity=0.404 Sum_probs=16.6
Q ss_pred CCCeeecccccccccCccccCCCCCCcEEeCCCCCCccc
Q psy12291 286 NLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYL 324 (404)
Q Consensus 286 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 324 (404)
+|++|++++|+|+.+++ .+..+++|+.|++++|+++++
T Consensus 2 ~L~~L~l~~N~i~~l~~-~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPP-ELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGG-HGTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCc-hHhCCCCCCEEEecCCCCCCC
Confidence 34444444444444432 244445555555555544443
No 58
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.12 E-value=8.5e-07 Score=74.55 Aligned_cols=234 Identities=22% Similarity=0.172 Sum_probs=149.9
Q ss_pred CCCCCcEEEccCCCCCcCCC----ccCCCCCCCCEEECCCCcccc----------cccccccCCccCcEEeccCCCCCCC
Q psy12291 115 GAIRLTVVQLSYNAIESLPA----NVFHDLISLEELDLSQNVLTS----------IQYGTFSGMYSLKRLKLQSNRINQL 180 (404)
Q Consensus 115 ~~~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~~~l~~----------~~~~~l~~l~~L~~L~l~~~~l~~~ 180 (404)
.+..+..++|++|.+..-.. ..+.+-.+|+...++.--... .-..++.+|+.|+.+++++|.+..-
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~ 107 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSE 107 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcc
Confidence 46788999999998764322 223445567777766432111 1123466789999999999987643
Q ss_pred CC----CccCCCCCCCeEecCCCcCcccCCCc-------------cCCCCCCCEEECCCCcCCCCChhh----hcCCCCC
Q psy12291 181 PP----GIFDDLKYLDFLSLRNNRLSFIRPGL-------------FNYFKHLTFLELSENWISSLNGDE----FSQLTSL 239 (404)
Q Consensus 181 ~~----~~~~~l~~L~~L~l~~~~~~~~~~~~-------------~~~l~~L~~L~l~~~~~~~~~~~~----~~~l~~L 239 (404)
.+ ..++.-+.|..|.+.+|.+..+.... ...-|.|+++....|++...+... +..-..|
T Consensus 108 ~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~l 187 (388)
T COG5238 108 FPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHENL 187 (388)
T ss_pred cchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcCc
Confidence 22 22345678899999998776443322 234578889999888887655322 2233578
Q ss_pred cEEECCCCCCcccCcc-----cccCCCCCcEEECcCCCcccccc----ccccCCCCCCeeecccccccccCcccc-----
Q psy12291 240 KELHLGQNYIETIPAG-----SFANLQSLEKLFLYSNNIQELHA----GTFAGLTNLTALFLNNNLLRYLDTKAF----- 305 (404)
Q Consensus 240 ~~L~l~~~~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~----~~~~~~~~L~~L~l~~n~i~~~~~~~~----- 305 (404)
+.+.+..|.+..-... -+..+.+|+.|+++.|.++.... .++...+.|++|.+..|-++.-+...+
T Consensus 188 k~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~ 267 (388)
T COG5238 188 KEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFN 267 (388)
T ss_pred eeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhh
Confidence 8899988877633211 13356889999999998876444 345556778999998887776544221
Q ss_pred -CCCCCCcEEeCCCCCCcc--cCc---cc--ccCCCCCcEEEccCCccccc
Q psy12291 306 -EPMLHLKKLQLDSNKLQY--LAT---DS--LSLLPNLITLKLAKNPWHCD 348 (404)
Q Consensus 306 -~~l~~L~~L~l~~n~l~~--~~~---~~--~~~l~~L~~l~l~~Np~~C~ 348 (404)
...|+|..|-..+|.+.. +-. .. -..+|-|..+.+.||.+.-+
T Consensus 268 e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E~ 318 (388)
T COG5238 268 EKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKEL 318 (388)
T ss_pred hhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchhH
Confidence 135788888888886543 111 11 13467777888888888543
No 59
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.12 E-value=2.5e-06 Score=51.70 Aligned_cols=38 Identities=37% Similarity=0.602 Sum_probs=16.4
Q ss_pred CCCEEEccCCcCcccCcccccCCCCCCEEeCCCCCCccc
Q psy12291 70 KLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTL 108 (404)
Q Consensus 70 ~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 108 (404)
+|++|++++|+|+++++. +.++++|++|++++|.++++
T Consensus 2 ~L~~L~l~~N~i~~l~~~-l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPE-LSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGGH-GTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCch-HhCCCCCCEEEecCCCCCCC
Confidence 344444444444444432 34444444444444444443
No 60
>KOG4579|consensus
Probab=98.11 E-value=6e-08 Score=72.80 Aligned_cols=109 Identities=22% Similarity=0.291 Sum_probs=53.1
Q ss_pred CCEEEccCCcCcccCcc--cccCCCCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCCEEEC
Q psy12291 71 LTELKLRKNHLSELPGK--LFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLEELDL 148 (404)
Q Consensus 71 L~~L~l~~~~l~~~~~~--~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 148 (404)
+-.++|+++++..++.. .+....+|+..+|++|.++++|+.+-..++.++.|++.+|.+.++|.. +..++.|+.|++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~lNl 107 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSLNL 107 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhccc
Confidence 33455555554433321 123334455555555555555555444445555555555555555544 445555555555
Q ss_pred CCCcccccccccccCCccCcEEeccCCCCCCCC
Q psy12291 149 SQNVLTSIQYGTFSGMYSLKRLKLQSNRINQLP 181 (404)
Q Consensus 149 ~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~~~ 181 (404)
+.|++.... ..+..+.++..|+..+|.+..++
T Consensus 108 ~~N~l~~~p-~vi~~L~~l~~Lds~~na~~eid 139 (177)
T KOG4579|consen 108 RFNPLNAEP-RVIAPLIKLDMLDSPENARAEID 139 (177)
T ss_pred ccCccccch-HHHHHHHhHHHhcCCCCccccCc
Confidence 555554433 22222445555555555444444
No 61
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.90 E-value=0.00011 Score=67.01 Aligned_cols=133 Identities=17% Similarity=0.166 Sum_probs=72.2
Q ss_pred CCCCCCEEECCCCcccccccccccCCccCcEEeccCC-CCCCCCCCccCCCCCCCeEecCCC-cCcccCCCccCCCCCCC
Q psy12291 139 DLISLEELDLSQNVLTSIQYGTFSGMYSLKRLKLQSN-RINQLPPGIFDDLKYLDFLSLRNN-RLSFIRPGLFNYFKHLT 216 (404)
Q Consensus 139 ~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~-~l~~~~~~~~~~l~~L~~L~l~~~-~~~~~~~~~~~~l~~L~ 216 (404)
.+.+++.|++++|.+..++ .+ ..+|++|.+.++ .++.++. .+ .++|+.|.+++| .+..+ .++|+
T Consensus 50 ~~~~l~~L~Is~c~L~sLP--~L--P~sLtsL~Lsnc~nLtsLP~-~L--P~nLe~L~Ls~Cs~L~sL-------P~sLe 115 (426)
T PRK15386 50 EARASGRLYIKDCDIESLP--VL--PNELTEITIENCNNLTTLPG-SI--PEGLEKLTVCHCPEISGL-------PESVR 115 (426)
T ss_pred HhcCCCEEEeCCCCCcccC--CC--CCCCcEEEccCCCCcccCCc-hh--hhhhhheEccCccccccc-------ccccc
Confidence 3567788888888776664 12 236888888764 3444442 22 256777888776 33322 23567
Q ss_pred EEECCCCcCCCCChhhhcCC-CCCcEEECCCCCCc---ccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeec
Q psy12291 217 FLELSENWISSLNGDEFSQL-TSLKELHLGQNYIE---TIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFL 292 (404)
Q Consensus 217 ~L~l~~~~~~~~~~~~~~~l-~~L~~L~l~~~~l~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l 292 (404)
.|++..+....+ ..+ ++|+.|.+.+++.. .++. . -.++|+.|++++|....++.. +. .+|+.|++
T Consensus 116 ~L~L~~n~~~~L-----~~LPssLk~L~I~~~n~~~~~~lp~-~--LPsSLk~L~Is~c~~i~LP~~-LP--~SLk~L~l 184 (426)
T PRK15386 116 SLEIKGSATDSI-----KNVPNGLTSLSINSYNPENQARIDN-L--ISPSLKTLSLTGCSNIILPEK-LP--ESLQSITL 184 (426)
T ss_pred eEEeCCCCCccc-----ccCcchHhheecccccccccccccc-c--cCCcccEEEecCCCcccCccc-cc--ccCcEEEe
Confidence 777665543322 122 35667766443211 1110 1 125677777777765543321 22 57777777
Q ss_pred cccc
Q psy12291 293 NNNL 296 (404)
Q Consensus 293 ~~n~ 296 (404)
+.+.
T Consensus 185 s~n~ 188 (426)
T PRK15386 185 HIEQ 188 (426)
T ss_pred cccc
Confidence 6653
No 62
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.86 E-value=0.00016 Score=66.13 Aligned_cols=136 Identities=17% Similarity=0.172 Sum_probs=76.6
Q ss_pred CCCCCCEEeCCCCCCcccCccccCCCCCCcEEEccC-CCCCcCCCccCCCCCCCCEEECCCC-cccccccccccCCccCc
Q psy12291 91 STINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSY-NAIESLPANVFHDLISLEELDLSQN-VLTSIQYGTFSGMYSLK 168 (404)
Q Consensus 91 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~~-~l~~~~~~~l~~l~~L~ 168 (404)
.+.+++.|++++|.++.+|. + ..+|+.|.+++ +.++.++.. + .++|+.|.+++| .+..++ ..|+
T Consensus 50 ~~~~l~~L~Is~c~L~sLP~--L--P~sLtsL~Lsnc~nLtsLP~~-L--P~nLe~L~Ls~Cs~L~sLP-------~sLe 115 (426)
T PRK15386 50 EARASGRLYIKDCDIESLPV--L--PNELTEITIENCNNLTTLPGS-I--PEGLEKLTVCHCPEISGLP-------ESVR 115 (426)
T ss_pred HhcCCCEEEeCCCCCcccCC--C--CCCCcEEEccCCCCcccCCch-h--hhhhhheEccCcccccccc-------cccc
Confidence 46788999999998888873 2 34789999886 445555542 2 357888888877 443322 3577
Q ss_pred EEeccCCCCCCCCCCccCCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcEEECCCC
Q psy12291 169 RLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKELHLGQN 247 (404)
Q Consensus 169 ~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~ 247 (404)
.|++..+....+.. -.++|+.|.+.+++........-.-.++|++|.+++|.....+ ..+. .+|+.|+++.+
T Consensus 116 ~L~L~~n~~~~L~~----LPssLk~L~I~~~n~~~~~~lp~~LPsSLk~L~Is~c~~i~LP-~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 116 SLEIKGSATDSIKN----VPNGLTSLSINSYNPENQARIDNLISPSLKTLSLTGCSNIILP-EKLP--ESLQSITLHIE 187 (426)
T ss_pred eEEeCCCCCccccc----CcchHhheeccccccccccccccccCCcccEEEecCCCcccCc-cccc--ccCcEEEeccc
Confidence 77776655433221 1134666666432211000000011246777777776654333 1121 46777777655
No 63
>KOG3665|consensus
Probab=97.79 E-value=8.5e-06 Score=80.39 Aligned_cols=109 Identities=22% Similarity=0.182 Sum_probs=54.8
Q ss_pred CCCCCEEECCCCcccccc-cccccCCccCcEEeccCCCCCCCCCCccCCCCCCCeEecCCCcCccc-CCCccCCCCCCCE
Q psy12291 140 LISLEELDLSQNVLTSIQ-YGTFSGMYSLKRLKLQSNRINQLPPGIFDDLKYLDFLSLRNNRLSFI-RPGLFNYFKHLTF 217 (404)
Q Consensus 140 l~~L~~L~l~~~~l~~~~-~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~-~~~~~~~l~~L~~ 217 (404)
+|+|+.|.+.+-.+..-. .....++++|..||++++.++.+. ..+.+++|+.|.+.+-.+... .-..+.++++|++
T Consensus 147 LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~--GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~v 224 (699)
T KOG3665|consen 147 LPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLS--GISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRV 224 (699)
T ss_pred CcccceEEecCceecchhHHHHhhccCccceeecCCCCccCcH--HHhccccHHHHhccCCCCCchhhHHHHhcccCCCe
Confidence 555666665554332211 122344556666666666665542 235566666666665544421 1122445666666
Q ss_pred EECCCCcCCCCCh------hhhcCCCCCcEEECCCCCCc
Q psy12291 218 LELSENWISSLNG------DEFSQLTSLKELHLGQNYIE 250 (404)
Q Consensus 218 L~l~~~~~~~~~~------~~~~~l~~L~~L~l~~~~l~ 250 (404)
||+|.......+. +.-..+|+|+.||++++.+.
T Consensus 225 LDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 225 LDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred eeccccccccchHHHHHHHHhcccCccccEEecCCcchh
Confidence 6666654443331 11124566777777665544
No 64
>KOG3665|consensus
Probab=97.79 E-value=7.1e-06 Score=80.96 Aligned_cols=82 Identities=23% Similarity=0.255 Sum_probs=35.0
Q ss_pred ccCcEEeccCCCCCC--CCCCccCCCCCCCeEecCCCcCcccC-CCccCCCCCCCEEECCCCcCCCCChhhhcCCCCCcE
Q psy12291 165 YSLKRLKLQSNRINQ--LPPGIFDDLKYLDFLSLRNNRLSFIR-PGLFNYFKHLTFLELSENWISSLNGDEFSQLTSLKE 241 (404)
Q Consensus 165 ~~L~~L~l~~~~l~~--~~~~~~~~l~~L~~L~l~~~~~~~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~ 241 (404)
.+|++|++++...-. -+...-..+|+|+.|.+.+-.+..-. .....++++|..||+++..++.+ ..++.+++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 366777776643221 11111123455555555554432110 12233444455555554444443 23344444444
Q ss_pred EECCCCC
Q psy12291 242 LHLGQNY 248 (404)
Q Consensus 242 L~l~~~~ 248 (404)
|.+.+-.
T Consensus 200 L~mrnLe 206 (699)
T KOG3665|consen 200 LSMRNLE 206 (699)
T ss_pred HhccCCC
Confidence 4444433
No 65
>KOG2123|consensus
Probab=97.75 E-value=1.1e-06 Score=74.14 Aligned_cols=82 Identities=27% Similarity=0.329 Sum_probs=48.1
Q ss_pred CCCcEEECCCCCCcccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCc-cccCCCCCCcEEe
Q psy12291 237 TSLKELHLGQNYIETIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDT-KAFEPMLHLKKLQ 315 (404)
Q Consensus 237 ~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~ 315 (404)
.+.+.|++-|+.+.+|.. ...++.|+.|.|+-|+|+.+.+ |..|++|++|+|..|.|..+.. ..+.++++|+.|.
T Consensus 19 ~~vkKLNcwg~~L~DIsi--c~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LW 94 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLDDISI--CEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLW 94 (388)
T ss_pred HHhhhhcccCCCccHHHH--HHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHh
Confidence 345556666666655542 4456666666666666666543 5556666666666666665543 4555666666666
Q ss_pred CCCCCCc
Q psy12291 316 LDSNKLQ 322 (404)
Q Consensus 316 l~~n~l~ 322 (404)
|..|.-.
T Consensus 95 L~ENPCc 101 (388)
T KOG2123|consen 95 LDENPCC 101 (388)
T ss_pred hccCCcc
Confidence 6666543
No 66
>KOG2739|consensus
Probab=97.66 E-value=1.9e-05 Score=66.40 Aligned_cols=39 Identities=28% Similarity=0.376 Sum_probs=17.2
Q ss_pred CCCCeeecccccccccCc-cccCCCCCCcEEeCCCCCCcc
Q psy12291 285 TNLTALFLNNNLLRYLDT-KAFEPMLHLKKLQLDSNKLQY 323 (404)
Q Consensus 285 ~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~ 323 (404)
|+|+++++++|+|+.+.. ..+..+.+|..|++.+|..+.
T Consensus 91 P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 91 PNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTN 130 (260)
T ss_pred CceeEEeecCCccccccccchhhhhcchhhhhcccCCccc
Confidence 445555555554443221 223334444455555544444
No 67
>KOG4341|consensus
Probab=97.48 E-value=2e-06 Score=76.56 Aligned_cols=285 Identities=18% Similarity=0.054 Sum_probs=142.4
Q ss_pred CCCEEEccCCcCc-ccCcc-cccCCCCCCEEeCCCCC-CcccCc-cccCCCCCCcEEEccCC-CCCcCCC-ccCCCCCCC
Q psy12291 70 KLTELKLRKNHLS-ELPGK-LFISTINLSTMDLSQNL-IKTLPS-TFFKGAIRLTVVQLSYN-AIESLPA-NVFHDLISL 143 (404)
Q Consensus 70 ~L~~L~l~~~~l~-~~~~~-~~~~~~~L~~L~l~~n~-l~~~~~-~~~~~~~~L~~L~l~~n-~l~~~~~-~~~~~l~~L 143 (404)
-|+.|.++++.=. .-+.. .-.+++++++|.+.++. +++..- .+-..+.+|++|++..+ .++...- ..-.++++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 4566666665322 11111 12456677777666663 332111 11223566666666663 3333221 122345667
Q ss_pred CEEECCCCc-ccccccc-cccCCccCcEEeccCCCCCCCCCCcc----CCCCCCCeEecCCCc-CcccCC-CccCCCCCC
Q psy12291 144 EELDLSQNV-LTSIQYG-TFSGMYSLKRLKLQSNRINQLPPGIF----DDLKYLDFLSLRNNR-LSFIRP-GLFNYFKHL 215 (404)
Q Consensus 144 ~~L~l~~~~-l~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~----~~l~~L~~L~l~~~~-~~~~~~-~~~~~l~~L 215 (404)
++|.+++++ +..-... .+.++..++.+...+|. +...+.+ .....+..+++..+. ++.... ..-..+..|
T Consensus 219 ~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~--e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~l 296 (483)
T KOG4341|consen 219 KYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCL--ELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHAL 296 (483)
T ss_pred HHhhhccCchhhcCcchHHhccchhhhhhhhcccc--cccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHh
Confidence 777776663 2221111 12344445555444432 1111111 112223334433331 121110 011234567
Q ss_pred CEEECCCCcCCC-CChhhh-cCCCCCcEEECCCCC-CcccCcccc-cCCCCCcEEECcCCCccccc-c-ccccCCCCCCe
Q psy12291 216 TFLELSENWISS-LNGDEF-SQLTSLKELHLGQNY-IETIPAGSF-ANLQSLEKLFLYSNNIQELH-A-GTFAGLTNLTA 289 (404)
Q Consensus 216 ~~L~l~~~~~~~-~~~~~~-~~l~~L~~L~l~~~~-l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~-~-~~~~~~~~L~~ 289 (404)
++++.+++.... ..-.++ .+.++|+.|-+.+++ ++......+ .+.+.|+.+++.++...... . ..-.+++.|++
T Consensus 297 q~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~ 376 (483)
T KOG4341|consen 297 QVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRV 376 (483)
T ss_pred hhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhcc
Confidence 777777664322 111222 356788888888874 444332222 24678888888887544322 1 22346889999
Q ss_pred eecccccc-cccCc----cccCCCCCCcEEeCCCCCCcc-cCcccccCCCCCcEEEccCCccccccCcHHHHH
Q psy12291 290 LFLNNNLL-RYLDT----KAFEPMLHLKKLQLDSNKLQY-LATDSLSLLPNLITLKLAKNPWHCDCAILYMAR 356 (404)
Q Consensus 290 L~l~~n~i-~~~~~----~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~l~l~~Np~~C~c~~~~~~~ 356 (404)
+.++.+.. +..+. ..-..+..|..+.|+++.... .....+..+++|+.+++.+..-.-.-....|.+
T Consensus 377 lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~vtk~~i~~~~~ 449 (483)
T KOG4341|consen 377 LSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQDVTKEAISRFAT 449 (483)
T ss_pred CChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhhhhhhhhHHHHh
Confidence 99987743 32211 222346778999999986543 434567778999999997654433333333333
No 68
>KOG2123|consensus
Probab=97.36 E-value=5.5e-06 Score=70.05 Aligned_cols=82 Identities=28% Similarity=0.379 Sum_probs=71.6
Q ss_pred CCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCc-ccccCCCCCcEE
Q psy12291 260 LQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLAT-DSLSLLPNLITL 338 (404)
Q Consensus 260 l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~l 338 (404)
+.+.++|+.-|+.+.+|.. ...++.|++|.|+-|+|+.+. .+..|++|++|+|+.|.|.+++. ..+.++|+|+.|
T Consensus 18 l~~vkKLNcwg~~L~DIsi--c~kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDISI--CEKMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHHHH--HHhcccceeEEeeccccccch--hHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 4677899999999999864 467899999999999999884 47789999999999999999875 446789999999
Q ss_pred EccCCcc
Q psy12291 339 KLAKNPW 345 (404)
Q Consensus 339 ~l~~Np~ 345 (404)
.|..||-
T Consensus 94 WL~ENPC 100 (388)
T KOG2123|consen 94 WLDENPC 100 (388)
T ss_pred hhccCCc
Confidence 9999995
No 69
>KOG2739|consensus
Probab=97.35 E-value=8.5e-05 Score=62.56 Aligned_cols=105 Identities=27% Similarity=0.301 Sum_probs=51.7
Q ss_pred CCCCCCCeEecCCCcCcccCCCccCCCCCCCEEECCCCcCC--CCChhhhcCCCCCcEEECCCCCCcccCc-ccccCCCC
Q psy12291 186 DDLKYLDFLSLRNNRLSFIRPGLFNYFKHLTFLELSENWIS--SLNGDEFSQLTSLKELHLGQNYIETIPA-GSFANLQS 262 (404)
Q Consensus 186 ~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~--~~~~~~~~~l~~L~~L~l~~~~l~~~~~-~~~~~l~~ 262 (404)
..+..|+.+.+.+..++.+. .+..+++|+.|.++.|+.. .-.......+|+|+++++++|++..+.. ..+..+++
T Consensus 40 d~~~~le~ls~~n~gltt~~--~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~n 117 (260)
T KOG2739|consen 40 DEFVELELLSVINVGLTTLT--NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELEN 117 (260)
T ss_pred ccccchhhhhhhccceeecc--cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcc
Confidence 34455666666665555432 3455667777777777332 2111122334666666666666553221 11334455
Q ss_pred CcEEECcCCCcccccc---ccccCCCCCCeeec
Q psy12291 263 LEKLFLYSNNIQELHA---GTFAGLTNLTALFL 292 (404)
Q Consensus 263 L~~L~L~~n~l~~~~~---~~~~~~~~L~~L~l 292 (404)
|..|++.+|..+.... ..|.-+++|++|+-
T Consensus 118 L~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~ 150 (260)
T KOG2739|consen 118 LKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDG 150 (260)
T ss_pred hhhhhcccCCccccccHHHHHHHHhhhhccccc
Confidence 5556665554443222 23334455554444
No 70
>KOG4341|consensus
Probab=97.06 E-value=1.4e-05 Score=71.47 Aligned_cols=292 Identities=17% Similarity=0.081 Sum_probs=164.0
Q ss_pred CeeEEEcCCCCCcc-cChhh-cCCCCCCCEEEccCCc-CcccCcccc-cCCCCCCEEeCCCC-CCcccC-ccccCCCCCC
Q psy12291 46 DIRVIDLGINQLST-LSKDA-FTGLYKLTELKLRKNH-LSELPGKLF-ISTINLSTMDLSQN-LIKTLP-STFFKGAIRL 119 (404)
Q Consensus 46 ~l~~L~l~~~~i~~-~~~~~-~~~~~~L~~L~l~~~~-l~~~~~~~~-~~~~~L~~L~l~~n-~l~~~~-~~~~~~~~~L 119 (404)
.++.|.++++.-.. -.... -..++++++|.+.++. +++..-..+ ..+++|++|++..| .++... .....++++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 46777777764222 22222 3467888888887773 443221111 45788888888886 455332 1234568888
Q ss_pred cEEEccCCC-CCc--CCCccCCCCCCCCEEECCCCccccccc--ccccCCccCcEEeccCCC-CCCCCC-CccCCCCCCC
Q psy12291 120 TVVQLSYNA-IES--LPANVFHDLISLEELDLSQNVLTSIQY--GTFSGMYSLKRLKLQSNR-INQLPP-GIFDDLKYLD 192 (404)
Q Consensus 120 ~~L~l~~n~-l~~--~~~~~~~~l~~L~~L~l~~~~l~~~~~--~~l~~l~~L~~L~l~~~~-l~~~~~-~~~~~l~~L~ 192 (404)
++++++.+. ++. +. ..+.++..++.+.+.+|.-..... ..-+++.-+..+++..|. ++...- .+-..+..|+
T Consensus 219 ~~lNlSwc~qi~~~gv~-~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq 297 (483)
T KOG4341|consen 219 KYLNLSWCPQISGNGVQ-ALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQ 297 (483)
T ss_pred HHhhhccCchhhcCcch-HHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhh
Confidence 888888764 221 11 123455566666666653111110 011233445566655542 232210 1113456788
Q ss_pred eEecCCCcCc-cc-CCCccCCCCCCCEEECCCCc-CCCCChhhh-cCCCCCcEEECCCCCCcccC--cccccCCCCCcEE
Q psy12291 193 FLSLRNNRLS-FI-RPGLFNYFKHLTFLELSENW-ISSLNGDEF-SQLTSLKELHLGQNYIETIP--AGSFANLQSLEKL 266 (404)
Q Consensus 193 ~L~l~~~~~~-~~-~~~~~~~l~~L~~L~l~~~~-~~~~~~~~~-~~l~~L~~L~l~~~~l~~~~--~~~~~~l~~L~~L 266 (404)
.+..+++... .. ......+.++|+++.+..++ ++......+ .+++.|+.+++.++...... ...-.+++.|+.|
T Consensus 298 ~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~l 377 (483)
T KOG4341|consen 298 VLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVL 377 (483)
T ss_pred hhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccC
Confidence 8888776431 11 11123456889999998875 333332222 35678999999887543221 1223467999999
Q ss_pred ECcCCCcc-ccccccc----cCCCCCCeeeccccccc-ccCccccCCCCCCcEEeCCCCCCcc-cC-cccccCCCCCcEE
Q psy12291 267 FLYSNNIQ-ELHAGTF----AGLTNLTALFLNNNLLR-YLDTKAFEPMLHLKKLQLDSNKLQY-LA-TDSLSLLPNLITL 338 (404)
Q Consensus 267 ~L~~n~l~-~~~~~~~----~~~~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~-~~-~~~~~~l~~L~~l 338 (404)
.++.+.+. +.....+ .++..|..+.|+++... +-.-+.+..+++|+.+++-+++-.. .+ .....++|+++..
T Consensus 378 slshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~vtk~~i~~~~~~lp~i~v~ 457 (483)
T KOG4341|consen 378 SLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQDVTKEAISRFATHLPNIKVH 457 (483)
T ss_pred ChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhhhhhhhhHHHHhhCccceeh
Confidence 99987543 3222222 34678999999988543 3444667788899999998875322 21 2233456766543
No 71
>KOG1947|consensus
Probab=96.41 E-value=0.00018 Score=69.40 Aligned_cols=35 Identities=26% Similarity=0.187 Sum_probs=15.2
Q ss_pred CcEEeCCCCCCcccCc-ccccC-CCCCcEEEccCCcc
Q psy12291 311 LKKLQLDSNKLQYLAT-DSLSL-LPNLITLKLAKNPW 345 (404)
Q Consensus 311 L~~L~l~~n~l~~~~~-~~~~~-l~~L~~l~l~~Np~ 345 (404)
++.|+++.+....... ..... +..+..+++.+.+.
T Consensus 403 l~~L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~ 439 (482)
T KOG1947|consen 403 LRVLNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRV 439 (482)
T ss_pred cceEecccCccccccchHHHhhhhhccccCCccCccc
Confidence 5566666654433221 11111 44455555555443
No 72
>PF01462 LRRNT: Leucine rich repeat N-terminal domain; InterPro: IPR000372 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain and a C-terminal LRR domain (IPR000483 from INTERPRO). This entry represents the N-terminal LRR domain. ; PDB: 3E6J_A 1W8A_A 2V9S_C 2V9T_B 3TWI_D 3ZYN_A 3ZYO_A 1OOK_G 1QYY_G 1SQ0_B ....
Probab=96.13 E-value=0.0058 Score=32.72 Aligned_cols=25 Identities=32% Similarity=0.817 Sum_probs=20.7
Q ss_pred CCCCceecCCCceEEecCCCCCccCCC
Q psy12291 14 CEGPCRCRPEIHTLSCWKQDMEELPFD 40 (404)
Q Consensus 14 ~~~~c~c~~~~~~~~~~~~~l~~ip~~ 40 (404)
||..|.|. ...|+|++.+|+++|.+
T Consensus 2 CP~~C~C~--~~~V~C~~~~L~~vP~~ 26 (28)
T PF01462_consen 2 CPRPCTCS--GLTVDCSGRGLTAVPSD 26 (28)
T ss_dssp SETTSEEE--TTEEEETTSS-SSS-ST
T ss_pred cCCCCEec--CCEeECCCCCCCccCCC
Confidence 78899999 68899999999999975
No 73
>smart00013 LRRNT Leucine rich repeat N-terminal domain.
Probab=95.99 E-value=0.011 Score=33.11 Aligned_cols=30 Identities=33% Similarity=0.946 Sum_probs=25.2
Q ss_pred CCCCCceecCCCceEEecCCCCCccCCCCCCCCC
Q psy12291 13 CCEGPCRCRPEIHTLSCWKQDMEELPFDQIIPVD 46 (404)
Q Consensus 13 ~~~~~c~c~~~~~~~~~~~~~l~~ip~~~~~~~~ 46 (404)
.||..|.|. ...++|.+.+++.+|.. +|.+
T Consensus 1 ~CP~~C~C~--~~~V~C~~~~L~~vP~~--iP~~ 30 (33)
T smart00013 1 ACPAPCNCS--GTAVDCSGRGLTEVPLD--LPPD 30 (33)
T ss_pred CcCCCCEEC--CCEeEeCCCCcCccCCC--CCcc
Confidence 378999998 57899999999999986 5543
No 74
>KOG1947|consensus
Probab=95.94 E-value=0.00032 Score=67.60 Aligned_cols=34 Identities=24% Similarity=0.242 Sum_probs=16.2
Q ss_pred CCeeecccccccccCc-cccCC-CCCCcEEeCCCCC
Q psy12291 287 LTALFLNNNLLRYLDT-KAFEP-MLHLKKLQLDSNK 320 (404)
Q Consensus 287 L~~L~l~~n~i~~~~~-~~~~~-l~~L~~L~l~~n~ 320 (404)
++.|+++.+....... ..... +..++.+++.+..
T Consensus 403 l~~L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~ 438 (482)
T KOG1947|consen 403 LRVLNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCR 438 (482)
T ss_pred cceEecccCccccccchHHHhhhhhccccCCccCcc
Confidence 6677777665433222 11111 4455555555543
No 75
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.82 E-value=0.0031 Score=31.65 Aligned_cols=16 Identities=44% Similarity=0.683 Sum_probs=7.3
Q ss_pred CCEEeCCCCCCcccCc
Q psy12291 95 LSTMDLSQNLIKTLPS 110 (404)
Q Consensus 95 L~~L~l~~n~l~~~~~ 110 (404)
|++|++++|.++.+|+
T Consensus 2 L~~Ldls~n~l~~ip~ 17 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPS 17 (22)
T ss_dssp ESEEEETSSEESEEGT
T ss_pred ccEEECCCCcCEeCCh
Confidence 4444444444444443
No 76
>PF01463 LRRCT: Leucine rich repeat C-terminal domain; InterPro: IPR000483 Leucine-rich repeats (LRR, see IPR001611 from INTERPRO) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions []. Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain (IPR000372 from INTERPRO) and a C-terminal LRR domain. This entry represents the C-terminal LRR domain. ; PDB: 3RFE_B 3REZ_D 2WFH_A 2V70_B 2V9S_C 2V9T_B 1W8A_A.
Probab=95.46 E-value=0.004 Score=32.37 Aligned_cols=23 Identities=30% Similarity=0.729 Sum_probs=17.5
Q ss_pred CeeCCCCCCCCCcccCCCCcCC-CC
Q psy12291 370 PTCRGPGNLGGKSVEDMSFDDL-CE 393 (404)
Q Consensus 370 ~~C~~p~~l~~~~l~~~~~~~~-C~ 393 (404)
.+|++|+.++| +|.++...++ |+
T Consensus 2 ~~Ca~P~~lrg-~l~~~~~~~f~C~ 25 (25)
T PF01463_consen 2 ARCASPPELRG-PLLDLPPSDFKCS 25 (25)
T ss_dssp -BEEESGGGTT-BGGGSSGGG----
T ss_pred CccCCChHHcC-cHhhCCcccCcCC
Confidence 58999999999 9999987665 63
No 77
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.29 E-value=0.0079 Score=30.13 Aligned_cols=17 Identities=35% Similarity=0.589 Sum_probs=9.8
Q ss_pred CCEEEccCCcCcccCcc
Q psy12291 71 LTELKLRKNHLSELPGK 87 (404)
Q Consensus 71 L~~L~l~~~~l~~~~~~ 87 (404)
|++|++++|+++.+|..
T Consensus 2 L~~Ldls~n~l~~ip~~ 18 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSS 18 (22)
T ss_dssp ESEEEETSSEESEEGTT
T ss_pred ccEEECCCCcCEeCChh
Confidence 55566666666555554
No 78
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.01 E-value=0.014 Score=27.08 Aligned_cols=11 Identities=55% Similarity=0.761 Sum_probs=3.2
Q ss_pred CCEEeCCCCCC
Q psy12291 95 LSTMDLSQNLI 105 (404)
Q Consensus 95 L~~L~l~~n~l 105 (404)
|++|++++|++
T Consensus 3 L~~L~l~~n~L 13 (17)
T PF13504_consen 3 LRTLDLSNNRL 13 (17)
T ss_dssp -SEEEETSS--
T ss_pred cCEEECCCCCC
Confidence 33344443333
No 79
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.00 E-value=0.017 Score=26.83 Aligned_cols=15 Identities=40% Similarity=0.687 Sum_probs=6.2
Q ss_pred CCcEEeCCCCCCccc
Q psy12291 310 HLKKLQLDSNKLQYL 324 (404)
Q Consensus 310 ~L~~L~l~~n~l~~~ 324 (404)
+|+.|++++|+++.+
T Consensus 2 ~L~~L~l~~n~L~~l 16 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSL 16 (17)
T ss_dssp T-SEEEETSS--SSE
T ss_pred ccCEEECCCCCCCCC
Confidence 455555555555443
No 80
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=94.97 E-value=0.022 Score=29.80 Aligned_cols=20 Identities=45% Similarity=0.735 Sum_probs=10.1
Q ss_pred CCCEEeCCCCCCcccCcccc
Q psy12291 94 NLSTMDLSQNLIKTLPSTFF 113 (404)
Q Consensus 94 ~L~~L~l~~n~l~~~~~~~~ 113 (404)
+|++|++++|.++.+|+.+|
T Consensus 3 ~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 3 NLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCEEECCCCcCCcCCHHHc
Confidence 45555555555555554443
No 81
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=94.97 E-value=0.022 Score=29.80 Aligned_cols=20 Identities=45% Similarity=0.735 Sum_probs=10.1
Q ss_pred CCCEEeCCCCCCcccCcccc
Q psy12291 94 NLSTMDLSQNLIKTLPSTFF 113 (404)
Q Consensus 94 ~L~~L~l~~n~l~~~~~~~~ 113 (404)
+|++|++++|.++.+|+.+|
T Consensus 3 ~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 3 NLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCEEECCCCcCCcCCHHHc
Confidence 45555555555555554443
No 82
>KOG3864|consensus
Probab=94.67 E-value=0.0071 Score=49.26 Aligned_cols=92 Identities=16% Similarity=0.078 Sum_probs=61.1
Q ss_pred ccCCCCCCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEccCCc-CcccCcccc-cCCCCCCEEeCCCC-CCcccCccc
Q psy12291 36 ELPFDQIIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLRKNH-LSELPGKLF-ISTINLSTMDLSQN-LIKTLPSTF 112 (404)
Q Consensus 36 ~ip~~~~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~-l~~~~~~~~-~~~~~L~~L~l~~n-~l~~~~~~~ 112 (404)
+.|........++.+|-++..|..+....+.+++.++.|.+.++. +.+-.-..+ .-.++|+.|++++| .|++-.-..
T Consensus 92 ~lp~~~~~~~~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~ 171 (221)
T KOG3864|consen 92 SLPGPNADNVKIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLAC 171 (221)
T ss_pred cCCCCCCCcceEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHH
Confidence 444433333468999999999988888888888899998888873 332111111 23567888888888 577655444
Q ss_pred cCCCCCCcEEEccCC
Q psy12291 113 FKGAIRLTVVQLSYN 127 (404)
Q Consensus 113 ~~~~~~L~~L~l~~n 127 (404)
+..+++|+.|.+.+-
T Consensus 172 L~~lknLr~L~l~~l 186 (221)
T KOG3864|consen 172 LLKLKNLRRLHLYDL 186 (221)
T ss_pred HHHhhhhHHHHhcCc
Confidence 666777777766543
No 83
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=94.65 E-value=0.029 Score=29.37 Aligned_cols=23 Identities=48% Similarity=0.615 Sum_probs=18.4
Q ss_pred CCCCCEEEccCCcCcccCccccc
Q psy12291 68 LYKLTELKLRKNHLSELPGKLFI 90 (404)
Q Consensus 68 ~~~L~~L~l~~~~l~~~~~~~~~ 90 (404)
+++|+.|++++|+|..+|.++|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 45788888888888888887764
No 84
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=94.65 E-value=0.029 Score=29.37 Aligned_cols=23 Identities=48% Similarity=0.615 Sum_probs=18.4
Q ss_pred CCCCCEEEccCCcCcccCccccc
Q psy12291 68 LYKLTELKLRKNHLSELPGKLFI 90 (404)
Q Consensus 68 ~~~L~~L~l~~~~l~~~~~~~~~ 90 (404)
+++|+.|++++|+|..+|.++|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 45788888888888888887764
No 85
>KOG3864|consensus
Probab=93.98 E-value=0.0052 Score=49.99 Aligned_cols=33 Identities=27% Similarity=0.268 Sum_probs=12.8
Q ss_pred CCcEEeCCCC-CCcccCcccccCCCCCcEEEccC
Q psy12291 310 HLKKLQLDSN-KLQYLATDSLSLLPNLITLKLAK 342 (404)
Q Consensus 310 ~L~~L~l~~n-~l~~~~~~~~~~l~~L~~l~l~~ 342 (404)
+|+.|+|++| +|++-.-..+..+++|+.|.+.+
T Consensus 152 ~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 152 SLQDLDLSGCPRITDGGLACLLKLKNLRRLHLYD 185 (221)
T ss_pred chheeeccCCCeechhHHHHHHHhhhhHHHHhcC
Confidence 3444444433 23333333333444444444433
No 86
>KOG4308|consensus
Probab=91.61 E-value=0.00081 Score=63.74 Aligned_cols=61 Identities=25% Similarity=0.271 Sum_probs=31.9
Q ss_pred CcEEECcCCCcccccc----ccccCC-CCCCeeecccccccccCc----cccCCCCCCcEEeCCCCCCcc
Q psy12291 263 LEKLFLYSNNIQELHA----GTFAGL-TNLTALFLNNNLLRYLDT----KAFEPMLHLKKLQLDSNKLQY 323 (404)
Q Consensus 263 L~~L~L~~n~l~~~~~----~~~~~~-~~L~~L~l~~n~i~~~~~----~~~~~l~~L~~L~l~~n~l~~ 323 (404)
+..|++..|.+.+... ..+..+ ..+++++++.|.|+.-.. +.+..++.++++.+.+|.+..
T Consensus 235 ~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 235 LRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred hHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 4446666665554322 122223 455666666666654433 334445566666666666654
No 87
>KOG4308|consensus
Probab=90.75 E-value=0.0028 Score=60.15 Aligned_cols=183 Identities=22% Similarity=0.200 Sum_probs=103.8
Q ss_pred CCEEECCCCcccccccc----cccCCccCcEEeccCCCCCCCCCCc----cCCC-CCCCeEecCCCcCcccCCCccCCCC
Q psy12291 143 LEELDLSQNVLTSIQYG----TFSGMYSLKRLKLQSNRINQLPPGI----FDDL-KYLDFLSLRNNRLSFIRPGLFNYFK 213 (404)
Q Consensus 143 L~~L~l~~~~l~~~~~~----~l~~l~~L~~L~l~~~~l~~~~~~~----~~~l-~~L~~L~l~~~~~~~~~~~~~~~l~ 213 (404)
+..|.+.+|.+..-... .+...+.|+.|++++|.+....... +... ..+++|.+..|.++.....
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~------ 162 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAA------ 162 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchH------
Confidence 66777777766544322 3445567777777777766321110 1111 2334444444433321100
Q ss_pred CCCEEECCCCcCCCCChhhhcCCCCCcEEECCCCCCcccC--------cccccCCCCCcEEECcCCCcccccc----ccc
Q psy12291 214 HLTFLELSENWISSLNGDEFSQLTSLKELHLGQNYIETIP--------AGSFANLQSLEKLFLYSNNIQELHA----GTF 281 (404)
Q Consensus 214 ~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~--------~~~~~~l~~L~~L~L~~n~l~~~~~----~~~ 281 (404)
.....+.....++.++++.|.+.... ...+....++++|.+.++.++.... ..+
T Consensus 163 --------------~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l 228 (478)
T KOG4308|consen 163 --------------PLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVL 228 (478)
T ss_pred --------------HHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHH
Confidence 00122233445555555555442110 1112345678888888887764322 244
Q ss_pred cCCCC-CCeeecccccccccCc----cccCCC-CCCcEEeCCCCCCcccCccc----ccCCCCCcEEEccCCcc
Q psy12291 282 AGLTN-LTALFLNNNLLRYLDT----KAFEPM-LHLKKLQLDSNKLQYLATDS----LSLLPNLITLKLAKNPW 345 (404)
Q Consensus 282 ~~~~~-L~~L~l~~n~i~~~~~----~~~~~l-~~L~~L~l~~n~l~~~~~~~----~~~l~~L~~l~l~~Np~ 345 (404)
...++ +..|++..|++..... ..+..+ ..+++++++.|.++.-.... +..++.++.+.+.+|+.
T Consensus 229 ~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l 302 (478)
T KOG4308|consen 229 ASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPL 302 (478)
T ss_pred hccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcc
Confidence 45555 7789999999876533 233444 67799999999999865533 44567899999999987
No 88
>KOG0473|consensus
Probab=90.12 E-value=0.0043 Score=51.58 Aligned_cols=85 Identities=22% Similarity=0.212 Sum_probs=35.1
Q ss_pred cCCCCCCCEEEccCCcCcccCcccccCCCCCCEEeCCCCCCcccCccccCCCCCCcEEEccCCCCCcCCCccCCCCCCCC
Q psy12291 65 FTGLYKLTELKLRKNHLSELPGKLFISTINLSTMDLSQNLIKTLPSTFFKGAIRLTVVQLSYNAIESLPANVFHDLISLE 144 (404)
Q Consensus 65 ~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 144 (404)
+..+...+.||++.|++..+... |+.++.|..|+++.|.+..+|.+ +.....++.+++..|.....|.. +...+.++
T Consensus 38 i~~~kr~tvld~~s~r~vn~~~n-~s~~t~~~rl~~sknq~~~~~~d-~~q~~e~~~~~~~~n~~~~~p~s-~~k~~~~k 114 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLVNLGKN-FSILTRLVRLDLSKNQIKFLPKD-AKQQRETVNAASHKNNHSQQPKS-QKKEPHPK 114 (326)
T ss_pred hhccceeeeehhhhhHHHhhccc-hHHHHHHHHHhccHhhHhhChhh-HHHHHHHHHHHhhccchhhCCcc-ccccCCcc
Confidence 33334444444444444433322 23344444444444444444433 33333344444444444433322 23444444
Q ss_pred EEECCCCc
Q psy12291 145 ELDLSQNV 152 (404)
Q Consensus 145 ~L~l~~~~ 152 (404)
.+++-++.
T Consensus 115 ~~e~k~~~ 122 (326)
T KOG0473|consen 115 KNEQKKTE 122 (326)
T ss_pred hhhhccCc
Confidence 44444443
No 89
>KOG0473|consensus
Probab=87.63 E-value=0.012 Score=49.02 Aligned_cols=92 Identities=22% Similarity=0.219 Sum_probs=57.3
Q ss_pred ccCcccccCCCCCcEEECcCCCccccccccccCCCCCCeeecccccccccCccccCCCCCCcEEeCCCCCCcccCccccc
Q psy12291 251 TIPAGSFANLQSLEKLFLYSNNIQELHAGTFAGLTNLTALFLNNNLLRYLDTKAFEPMLHLKKLQLDSNKLQYLATDSLS 330 (404)
Q Consensus 251 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 330 (404)
.++...+......+.||++.|.+..... -|..++.+..|+++.|++...+. .+.....+..+++.+|..+..|- .+.
T Consensus 32 ~~~v~ei~~~kr~tvld~~s~r~vn~~~-n~s~~t~~~rl~~sknq~~~~~~-d~~q~~e~~~~~~~~n~~~~~p~-s~~ 108 (326)
T KOG0473|consen 32 EIPVREIASFKRVTVLDLSSNRLVNLGK-NFSILTRLVRLDLSKNQIKFLPK-DAKQQRETVNAASHKNNHSQQPK-SQK 108 (326)
T ss_pred ccchhhhhccceeeeehhhhhHHHhhcc-chHHHHHHHHHhccHhhHhhChh-hHHHHHHHHHHHhhccchhhCCc-ccc
Confidence 3343334455666667777666655533 24455667777777777766633 33444556667777777766643 466
Q ss_pred CCCCCcEEEccCCcc
Q psy12291 331 LLPNLITLKLAKNPW 345 (404)
Q Consensus 331 ~l~~L~~l~l~~Np~ 345 (404)
..+.++.+++.+|||
T Consensus 109 k~~~~k~~e~k~~~~ 123 (326)
T KOG0473|consen 109 KEPHPKKNEQKKTEF 123 (326)
T ss_pred ccCCcchhhhccCcc
Confidence 777888888888875
No 90
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=86.13 E-value=0.55 Score=24.53 Aligned_cols=15 Identities=33% Similarity=0.461 Sum_probs=7.0
Q ss_pred CCCeeeccccccccc
Q psy12291 286 NLTALFLNNNLLRYL 300 (404)
Q Consensus 286 ~L~~L~l~~n~i~~~ 300 (404)
+|+.|+++.|+|+.+
T Consensus 3 ~L~~L~L~~NkI~~I 17 (26)
T smart00365 3 NLEELDLSQNKIKKI 17 (26)
T ss_pred ccCEEECCCCcccee
Confidence 444444444444433
No 91
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=84.35 E-value=0.26 Score=25.03 Aligned_cols=11 Identities=45% Similarity=0.537 Sum_probs=3.5
Q ss_pred CCeeecccccc
Q psy12291 287 LTALFLNNNLL 297 (404)
Q Consensus 287 L~~L~l~~n~i 297 (404)
|++|+|++|+|
T Consensus 4 L~~L~l~~n~i 14 (24)
T PF13516_consen 4 LETLDLSNNQI 14 (24)
T ss_dssp -SEEE-TSSBE
T ss_pred CCEEEccCCcC
Confidence 33344443333
No 92
>KOG3763|consensus
Probab=83.93 E-value=0.5 Score=44.81 Aligned_cols=12 Identities=42% Similarity=0.451 Sum_probs=7.9
Q ss_pred CCcEEEccCCcc
Q psy12291 334 NLITLKLAKNPW 345 (404)
Q Consensus 334 ~L~~l~l~~Np~ 345 (404)
.|++|.+.|||.
T Consensus 271 ~Leel~l~GNPl 282 (585)
T KOG3763|consen 271 PLEELVLEGNPL 282 (585)
T ss_pred CHHHeeecCCcc
Confidence 456666777776
No 93
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=82.68 E-value=0.93 Score=23.59 Aligned_cols=18 Identities=33% Similarity=0.471 Sum_probs=13.1
Q ss_pred CCCcEEeCCCCCCcccCc
Q psy12291 309 LHLKKLQLDSNKLQYLAT 326 (404)
Q Consensus 309 ~~L~~L~l~~n~l~~~~~ 326 (404)
++|+.|++++|+++.+|.
T Consensus 2 ~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLTSLPE 19 (26)
T ss_pred cccceeecCCCccccCcc
Confidence 467778888888777764
No 94
>KOG3763|consensus
Probab=76.41 E-value=1.1 Score=42.57 Aligned_cols=63 Identities=22% Similarity=0.182 Sum_probs=36.0
Q ss_pred CCCCCcEEECCCCCCcccCc--ccccCCCCCcEEECcCC--Ccccccc-ccccCCCCCCeeeccccccc
Q psy12291 235 QLTSLKELHLGQNYIETIPA--GSFANLQSLEKLFLYSN--NIQELHA-GTFAGLTNLTALFLNNNLLR 298 (404)
Q Consensus 235 ~l~~L~~L~l~~~~l~~~~~--~~~~~l~~L~~L~L~~n--~l~~~~~-~~~~~~~~L~~L~l~~n~i~ 298 (404)
+.+.+..+.+++|++..+.. ..-...|+|+.|+|++| .+..... ..+ +...|++|.+.||.+.
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~-k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKL-KGLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhh-cCCCHHHeeecCCccc
Confidence 44567777777777765543 12234577778888777 3332211 111 2345677777777664
No 95
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=70.06 E-value=3.8 Score=21.69 Aligned_cols=13 Identities=46% Similarity=0.718 Sum_probs=6.9
Q ss_pred CCcEEeCCCCCCc
Q psy12291 310 HLKKLQLDSNKLQ 322 (404)
Q Consensus 310 ~L~~L~l~~n~l~ 322 (404)
+|++|+|++|.+.
T Consensus 3 ~L~~LdL~~N~i~ 15 (28)
T smart00368 3 SLRELDLSNNKLG 15 (28)
T ss_pred ccCEEECCCCCCC
Confidence 4555555555554
No 96
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=47.70 E-value=12 Score=43.30 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=28.1
Q ss_pred ECcCCCccccccccccCCCCCCeeecccccccc
Q psy12291 267 FLYSNNIQELHAGTFAGLTNLTALFLNNNLLRY 299 (404)
Q Consensus 267 ~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~ 299 (404)
+|++|+|+.++...|..+++|+.|+|++|.+..
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~C 33 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFEC 33 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCcccc
Confidence 578899999999899999999999999886653
No 97
>PF05725 FNIP: FNIP Repeat; InterPro: IPR008615 This repeat is approximately 22 residues long and is only found in Dictyostelium discoideum (Slime mould). It appears to be related to IPR001611 from INTERPRO. The alignment consists of two tandem repeats. It is termed the FNIP repeat after the pattern of conserved residues.
Probab=43.07 E-value=40 Score=20.00 Aligned_cols=34 Identities=15% Similarity=0.286 Sum_probs=17.8
Q ss_pred CCCCCeeEEEcCCCCCcccChhhcCCCCCCCEEEcc
Q psy12291 42 IIPVDIRVIDLGINQLSTLSKDAFTGLYKLTELKLR 77 (404)
Q Consensus 42 ~~~~~l~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~ 77 (404)
.+|.++++|.+..+--..+..+.+. .+|++|.++
T Consensus 9 ~iP~~l~~L~~g~~fn~~i~~~~lP--~sl~~L~fg 42 (44)
T PF05725_consen 9 SIPSSLKSLIFGSSFNQPIEPGSLP--NSLKSLSFG 42 (44)
T ss_pred eeCCCCeEEEECCccCccCCCCccC--CCceEEEee
Confidence 3666777777744433333333333 356666554
No 98
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=42.75 E-value=16 Score=18.76 Aligned_cols=11 Identities=27% Similarity=0.450 Sum_probs=6.2
Q ss_pred CCCcEEeCCCC
Q psy12291 309 LHLKKLQLDSN 319 (404)
Q Consensus 309 ~~L~~L~l~~n 319 (404)
++|++|+|++|
T Consensus 2 ~~L~~L~l~~C 12 (26)
T smart00367 2 PNLRELDLSGC 12 (26)
T ss_pred CCCCEeCCCCC
Confidence 45555555555
No 99
>PF08576 DUF1764: Eukaryotic protein of unknown function (DUF1764); InterPro: IPR013885 This entry consists of eukaryotic proteins of unknown function, including many hypothetical proteins.
Probab=21.06 E-value=40 Score=24.55 Aligned_cols=8 Identities=50% Similarity=1.472 Sum_probs=6.8
Q ss_pred CCcccccc
Q psy12291 342 KNPWHCDC 349 (404)
Q Consensus 342 ~Np~~C~c 349 (404)
.+||.|+|
T Consensus 93 ~CPFDC~C 100 (102)
T PF08576_consen 93 LCPFDCDC 100 (102)
T ss_pred CCCCcCCC
Confidence 58999998
No 100
>KOG4242|consensus
Probab=20.19 E-value=5.4e+02 Score=24.90 Aligned_cols=227 Identities=19% Similarity=0.082 Sum_probs=105.1
Q ss_pred CCCCEEEccCCcCc-ccCccc--ccCCCCCCEEeCCCCCCc--c-cCccccCCCCCCcEEEccCCCCC-----cCC---C
Q psy12291 69 YKLTELKLRKNHLS-ELPGKL--FISTINLSTMDLSQNLIK--T-LPSTFFKGAIRLTVVQLSYNAIE-----SLP---A 134 (404)
Q Consensus 69 ~~L~~L~l~~~~l~-~~~~~~--~~~~~~L~~L~l~~n~l~--~-~~~~~~~~~~~L~~L~l~~n~l~-----~~~---~ 134 (404)
..+.+++++.|... .++..+ ......+++++.+...+. . ..+.++...+++...+++.|... ..+ .
T Consensus 214 ~~lteldls~n~~Kddip~~~n~~a~~~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~s~skg~Egg~~~k 293 (553)
T KOG4242|consen 214 LWLTELDLSTNGGKDDIPRTLNKKAGTLVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGTSPSKGEEGGGAEK 293 (553)
T ss_pred ccccccccccCCCCccchhHHHHhhhhhhhhcccccccccchhhcccccccccccccchhhhccCCCCcccccccccccc
Confidence 34778888877655 333211 122234667777766543 1 23333444567777777766533 111 1
Q ss_pred ccCCCCCCCCEEECCCCccccccccc-c-----cCCccCcEEeccCCCCCCC--CCCccCCCCCCCeEecCCCcCcccCC
Q psy12291 135 NVFHDLISLEELDLSQNVLTSIQYGT-F-----SGMYSLKRLKLQSNRINQL--PPGIFDDLKYLDFLSLRNNRLSFIRP 206 (404)
Q Consensus 135 ~~~~~l~~L~~L~l~~~~l~~~~~~~-l-----~~l~~L~~L~l~~~~l~~~--~~~~~~~l~~L~~L~l~~~~~~~~~~ 206 (404)
..|..-+++ +|++.++........+ + ..-+.=-.+++..|....- .... .+-..+++|.+..|...+...
T Consensus 294 ~~fS~~~sg-hln~~~~~~psE~lks~LLgla~ne~t~g~rldl~~cp~~~a~vleac-i~g~R~q~l~~rdnnldgeg~ 371 (553)
T KOG4242|consen 294 DTFSPDPSG-HLNSRPRYTPSEKLKSMLLGLAENEATLGARLDLRRCPLERAEVLEAC-IFGQRVQVLLQRDNNLDGEGG 371 (553)
T ss_pred cccCcCccc-ccccccccCchhhhhhhhcccccccccccccCChhhccccccchhhcc-ccceeeeEeeccccccccccc
Confidence 223333455 6666555432211100 0 0001111234444433211 1111 111347777777776543222
Q ss_pred C--ccCCCCCCCEEECCCCcCCCCC-hhhhc--------CCCCCcEEECCCCCCcccCcc---cccCCCCCcEEECcCCC
Q psy12291 207 G--LFNYFKHLTFLELSENWISSLN-GDEFS--------QLTSLKELHLGQNYIETIPAG---SFANLQSLEKLFLYSNN 272 (404)
Q Consensus 207 ~--~~~~l~~L~~L~l~~~~~~~~~-~~~~~--------~l~~L~~L~l~~~~l~~~~~~---~~~~l~~L~~L~L~~n~ 272 (404)
. .....+..+.+.+.+..-..+. ..... .---+..+.++.+.+..-... ....-+.+..|++++|.
T Consensus 372 ~vgk~~~s~s~r~l~agrs~~kqvm~s~~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~ 451 (553)
T KOG4242|consen 372 AVGKRKQSKSGRILKAGRSGDKQVMDSSTEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNG 451 (553)
T ss_pred cccceeeccccccccccccCCceeccccccchhhhhhhcccccccCcccCCCcccccHHHHHHhhccCcccccccccCCC
Confidence 1 2333456666666554331110 00000 111366677777766543321 23345788899999998
Q ss_pred ccccccccc----cCCCCCCeeecccccc
Q psy12291 273 IQELHAGTF----AGLTNLTALFLNNNLL 297 (404)
Q Consensus 273 l~~~~~~~~----~~~~~L~~L~l~~n~i 297 (404)
..+.....+ ..-.+++.+..+.|..
T Consensus 452 mgd~gap~lpkalq~n~rlr~ipds~n~p 480 (553)
T KOG4242|consen 452 MGDGGAPPLPKALQSNCRLRPIPDSLNLP 480 (553)
T ss_pred cccCCCCcCccccCCCCccCCCCCCCCCc
Confidence 776544322 2223455555554443
Done!