Your job contains 1 sequence.
>psy12294
MDFLQLFWGHLMVTSGILFCQHKVLGLIVTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQ
MAGIEDCYTSARGSTGTLGNFGECNTQHETSSYTETQCMQVLVSSHFPISESLNTISEIL
EST
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12294
(123 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0004867 - symbol:RpS2 "Ribosomal protein S2" speci... 260 2.1e-22 1
UNIPROTKB|E9PT76 - symbol:E9PT76 "Uncharacterized protein... 252 1.5e-21 1
UNIPROTKB|I3L404 - symbol:RPS2 "40S ribosomal protein S2"... 251 1.9e-21 1
UNIPROTKB|E9PSQ6 - symbol:LOC100359960 "Protein LOC100359... 250 2.4e-21 1
UNIPROTKB|E1C4M0 - symbol:E1C4M0 "Uncharacterized protein... 247 4.9e-21 1
UNIPROTKB|O18789 - symbol:RPS2 "40S ribosomal protein S2"... 247 4.9e-21 1
UNIPROTKB|E2QWY6 - symbol:LOC608162 "Uncharacterized prot... 247 4.9e-21 1
UNIPROTKB|E9PM36 - symbol:RPS2 "40S ribosomal protein S2"... 247 4.9e-21 1
UNIPROTKB|E9PQD7 - symbol:RPS2 "40S ribosomal protein S2"... 247 4.9e-21 1
UNIPROTKB|H0YEN5 - symbol:RPS2 "40S ribosomal protein S2"... 247 4.9e-21 1
UNIPROTKB|P15880 - symbol:RPS2 "40S ribosomal protein S2"... 247 4.9e-21 1
UNIPROTKB|I3LJ87 - symbol:RPS2 "Uncharacterized protein" ... 247 4.9e-21 1
RGD|2323085 - symbol:LOC100359960 "ribosomal protein S2-l... 247 4.9e-21 1
RGD|619887 - symbol:Rps2 "ribosomal protein S2" species:1... 247 4.9e-21 1
UNIPROTKB|E9PU05 - symbol:LOC100359960 "Protein LOC100359... 247 4.9e-21 1
ZFIN|ZDB-GENE-040426-2454 - symbol:rps2 "ribosomal protei... 247 4.9e-21 1
UNIPROTKB|E9PTY3 - symbol:LOC100359960 "Protein LOC100359... 245 8.0e-21 1
WB|WBGene00004471 - symbol:rps-2 species:6239 "Caenorhabd... 244 1.0e-20 1
RGD|1588815 - symbol:LOC688473 "similar to 40S ribosomal ... 237 5.7e-20 1
MGI|MGI:3643826 - symbol:Gm8225 "predicted gene 8225" spe... 235 9.2e-20 1
RGD|1562399 - symbol:RGD1562399 "similar to 40S ribosomal... 230 3.1e-19 1
UNIPROTKB|F1M5X9 - symbol:F1M5X9 "Uncharacterized protein... 227 6.5e-19 1
UNIPROTKB|J9P0D3 - symbol:J9P0D3 "Uncharacterized protein... 225 1.1e-18 1
RGD|1560789 - symbol:RGD1560789 "similar to ribosomal pro... 224 1.4e-18 1
UNIPROTKB|F1S275 - symbol:F1S275 "Uncharacterized protein... 222 2.2e-18 1
UNIPROTKB|F1LUE4 - symbol:F1LUE4 "Uncharacterized protein... 222 2.2e-18 1
POMBASE|SPCC576.08c - symbol:rps2 "40S ribosomal protein ... 219 4.6e-18 1
UNIPROTKB|F1LUI9 - symbol:F1LUI9 "Uncharacterized protein... 219 4.6e-18 1
UNIPROTKB|F1LZV8 - symbol:F1LZV8 "Uncharacterized protein... 219 4.6e-18 1
DICTYBASE|DDB_G0293742 - symbol:rps2 "ribosomal protein S... 217 7.5e-18 1
TAIR|locus:2016585 - symbol:XW6 species:3702 "Arabidopsis... 212 2.5e-17 1
TAIR|locus:504956181 - symbol:AT1G58684 species:3702 "Ara... 212 2.5e-17 1
TAIR|locus:2826988 - symbol:AT1G58983 species:3702 "Arabi... 212 2.5e-17 1
TAIR|locus:2826968 - symbol:AT1G59359 species:3702 "Arabi... 212 2.5e-17 1
TAIR|locus:2054406 - symbol:AT2G41840 species:3702 "Arabi... 212 2.5e-17 1
TAIR|locus:2103539 - symbol:AT3G57490 species:3702 "Arabi... 212 2.5e-17 1
RGD|1586357 - symbol:LOC689943 "similar to 40S ribosomal ... 204 1.8e-16 1
UNIPROTKB|J9PAX1 - symbol:J9PAX1 "Uncharacterized protein... 196 1.3e-15 1
UNIPROTKB|F1LVB4 - symbol:F1LVB4 "Uncharacterized protein... 195 1.6e-15 1
GENEDB_PFALCIPARUM|PF14_0448 - symbol:PF14_0448 "ribosoma... 194 2.0e-15 1
UNIPROTKB|Q8IL02 - symbol:PF14_0448 "40S ribosomal protei... 194 2.0e-15 1
UNIPROTKB|F1LUJ6 - symbol:F1LUJ6 "Uncharacterized protein... 194 2.0e-15 1
UNIPROTKB|F1LUA6 - symbol:F1LUA6 "Uncharacterized protein... 192 3.3e-15 1
CGD|CAL0004119 - symbol:RPS21 species:5476 "Candida albic... 191 4.2e-15 1
SGD|S000003091 - symbol:RPS2 "Protein component of the sm... 188 8.8e-15 1
UNIPROTKB|F1M9M7 - symbol:F1M9M7 "Uncharacterized protein... 187 1.1e-14 1
UNIPROTKB|G4MPT3 - symbol:MGG_16248 "30S ribosomal protei... 186 1.4e-14 1
ASPGD|ASPL0000036430 - symbol:AN3413 species:162425 "Emer... 183 3.0e-14 1
UNIPROTKB|F1M103 - symbol:F1M103 "Uncharacterized protein... 173 3.4e-13 1
UNIPROTKB|E9PMM9 - symbol:RPS2 "40S ribosomal protein S2"... 158 1.3e-11 1
RGD|1589430 - symbol:LOC680646 "similar to 40S ribosomal ... 157 1.7e-11 1
UNIPROTKB|F1M474 - symbol:F1M474 "Uncharacterized protein... 154 3.5e-11 1
UNIPROTKB|F1PW41 - symbol:F1PW41 "Uncharacterized protein... 124 5.3e-08 1
UNIPROTKB|J9P3M6 - symbol:J9P3M6 "Uncharacterized protein... 126 9.6e-08 1
TIGR_CMR|CHY_2292 - symbol:CHY_2292 "ribosomal protein S5... 90 0.00029 1
TIGR_CMR|CPS_0618 - symbol:CPS_0618 "ribosomal protein S5... 90 0.00030 1
>FB|FBgn0004867 [details] [associations]
symbol:RpS2 "Ribosomal protein S2" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0007275 GO:GO:0030154
EMBL:AE014134 GO:GO:0005811 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0048477 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 KO:K02981 TIGRFAMs:TIGR01020
OMA:GIKDVWT CTD:6187 GeneTree:ENSGT00390000001433 EMBL:U01334
EMBL:U01335 EMBL:X69120 EMBL:AY094799 PIR:S30395 RefSeq:NP_476874.1
UniGene:Dm.3451 ProteinModelPortal:P31009 SMR:P31009 DIP:DIP-18767N
IntAct:P31009 MINT:MINT-769241 STRING:P31009 PaxDb:P31009
PRIDE:P31009 EnsemblMetazoa:FBtr0079905 EnsemblMetazoa:FBtr0330682
GeneID:34309 KEGG:dme:Dmel_CG5920 FlyBase:FBgn0004867
InParanoid:P31009 OrthoDB:EOG4TX97W PhylomeDB:P31009
GenomeRNAi:34309 NextBio:787861 Bgee:P31009 GermOnline:CG5920
Uniprot:P31009
Length = 267
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 50/55 (90%), Positives = 51/55 (92%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGE 83
VTGKCGSV VRLIPAPRGTGIV APVPKKLL MAGIEDCYTSARGSTGTLGNF +
Sbjct: 167 VTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAK 221
>UNIPROTKB|E9PT76 [details] [associations]
symbol:E9PT76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433
IPI:IPI00562369 Ensembl:ENSRNOT00000043480 OMA:DSKEWIP
Uniprot:E9PT76
Length = 223
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 57/112 (50%), Positives = 71/112 (63%)
Query: 7 FWGHLMVTSGILFCQHKVLGLIVTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIED 66
+WG+ + + C+ + VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+D
Sbjct: 97 YWGNKIGKPHTVPCK-----VAVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDD 151
Query: 67 CYTSARGSTGTLGNFGECNTQHETSSYTE-TQCMQVLVSSHFPISESLNTIS 117
CYTSARG T TLGNF + + +Y+ T + L S I SL +S
Sbjct: 152 CYTSARGCTATLGNFAKATFDAISKTYSYLTPSGKRLCSPSLLIRNSLTILS 203
>UNIPROTKB|I3L404 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 HGNC:HGNC:10404 Ensembl:ENST00000526586
Bgee:I3L404 Uniprot:I3L404
Length = 155
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 48/58 (82%), Positives = 51/58 (87%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNT 86
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNFG +T
Sbjct: 95 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFGRWST 152
>UNIPROTKB|E9PSQ6 [details] [associations]
symbol:LOC100359960 "Protein LOC100359960" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
IPI:IPI00568581 Ensembl:ENSRNOT00000048967 ArrayExpress:E9PSQ6
Uniprot:E9PSQ6
Length = 221
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 54/90 (60%), Positives = 62/90 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQH 88
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 112 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 171
Query: 89 ETSSYTE-TQCMQVLVSSHFPISESLNTIS 117
+ +Y+ T + L S I SL +S
Sbjct: 172 ISKTYSYLTPSGKRLCSPSLLIRNSLTILS 201
>UNIPROTKB|E1C4M0 [details] [associations]
symbol:E1C4M0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0017134 "fibroblast growth factor binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0005654 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020 OMA:GIKDVWT
GeneTree:ENSGT00390000001433 EMBL:AADN02023671 IPI:IPI00572788
PRIDE:E1C4M0 Ensembl:ENSGALT00000008816 Uniprot:E1C4M0
Length = 286
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 177 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 236
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 237 ISKTYSYLTPDLWKETVFTKSPYQE 261
>UNIPROTKB|O18789 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9913 "Bos
taurus" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0017134 "fibroblast growth factor binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0005654 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020 OMA:GIKDVWT
EMBL:BC102227 EMBL:AF013215 IPI:IPI00695732 RefSeq:NP_001028785.1
UniGene:Bt.48814 ProteinModelPortal:O18789 SMR:O18789 STRING:O18789
PRIDE:O18789 Ensembl:ENSBTAT00000012544 GeneID:286867
KEGG:bta:286867 CTD:6187 GeneTree:ENSGT00390000001433
HOVERGEN:HBG000437 InParanoid:O18789 OrthoDB:EOG4SXND8
NextBio:20806516 Uniprot:O18789
Length = 293
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 184 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 243
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 244 ISKTYSYLTPDLWKETVFTKSPYQE 268
>UNIPROTKB|E2QWY6 [details] [associations]
symbol:LOC608162 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020 OMA:GIKDVWT
GeneTree:ENSGT00390000001433 EMBL:AAEX03004635
Ensembl:ENSCAFT00000030964 Uniprot:E2QWY6
Length = 293
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 184 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 243
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 244 ISKTYSYLTPDLWKETVFTKSPYQE 268
>UNIPROTKB|E9PM36 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 HGNC:HGNC:10404 IPI:IPI00977151
ProteinModelPortal:E9PM36 SMR:E9PM36 Ensembl:ENST00000529806
ArrayExpress:E9PM36 Bgee:E9PM36 Uniprot:E9PM36
Length = 209
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 47/54 (87%), Positives = 49/54 (90%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFG 82
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNFG
Sbjct: 154 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFG 207
>UNIPROTKB|E9PQD7 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
Pfam:PF03719 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC005363
PANTHER:PTHR13718 HGNC:HGNC:10404 IPI:IPI00979595
ProteinModelPortal:E9PQD7 SMR:E9PQD7 PRIDE:E9PQD7
Ensembl:ENST00000526522 ArrayExpress:E9PQD7 Bgee:E9PQD7
Uniprot:E9PQD7
Length = 235
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 126 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 185
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 186 ISKTYSYLTPDLWKETVFTKSPYQE 210
>UNIPROTKB|H0YEN5 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
PANTHER:PTHR13718 TIGRFAMs:TIGR01020 HGNC:HGNC:10404 PRIDE:H0YEN5
Ensembl:ENST00000533186 Bgee:H0YEN5 Uniprot:H0YEN5
Length = 195
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 86 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 145
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 146 ISKTYSYLTPDLWKETVFTKSPYQE 170
>UNIPROTKB|P15880 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0017134 "fibroblast growth factor binding" evidence=IPI]
[GO:0006412 "translation" evidence=IC;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 Reactome:REACT_116125 GO:GO:0005654
GO:GO:0000184 GO:GO:0006413 Gene3D:3.30.160.20 GO:GO:0003723
EMBL:CH471112 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006415 GO:GO:0006414
GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0019083
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020 OMA:GIKDVWT
CTD:6187 HOVERGEN:HBG000437 OrthoDB:EOG4SXND8 EMBL:X17206
EMBL:AK312173 EMBL:BC001795 EMBL:BC006559 EMBL:BC008862
EMBL:BC010165 EMBL:BC012354 EMBL:BC016178 EMBL:BC016951
EMBL:BC018993 EMBL:BC021545 EMBL:BC023541 EMBL:BC025677
EMBL:BC066321 EMBL:BC068051 EMBL:BC071922 EMBL:BC071923
EMBL:BC071924 EMBL:BC073966 EMBL:BC075830 EMBL:BC103756
EMBL:BC105985 IPI:IPI00013485 PIR:S08228 RefSeq:NP_002943.2
UniGene:Hs.356366 UniGene:Hs.381079 UniGene:Hs.498569
UniGene:Hs.506997 ProteinModelPortal:P15880 SMR:P15880
IntAct:P15880 MINT:MINT-3008399 STRING:P15880 PhosphoSite:P15880
DMDM:1710756 PaxDb:P15880 PRIDE:P15880 DNASU:6187
Ensembl:ENST00000343262 GeneID:6187 KEGG:hsa:6187 UCSC:uc002cnn.2
GeneCards:GC16M002012 H-InvDB:HIX0029256 H-InvDB:HIX0039223
H-InvDB:HIX0202579 HGNC:HGNC:10404 MIM:603624 neXtProt:NX_P15880
PharmGKB:PA34806 InParanoid:P15880 PhylomeDB:P15880 GenomeRNAi:6187
NextBio:24025 ArrayExpress:P15880 Bgee:P15880 CleanEx:HS_RPS2
Genevestigator:P15880 GermOnline:ENSG00000140988 Uniprot:P15880
Length = 293
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 184 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 243
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 244 ISKTYSYLTPDLWKETVFTKSPYQE 268
>UNIPROTKB|I3LJ87 [details] [associations]
symbol:RPS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005654 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433
Ensembl:ENSSSCT00000024892 OMA:DSKEWAP Uniprot:I3LJ87
Length = 184
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 75 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 134
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 135 ISKTYSYLTPDLWKETVFTKSPYQE 159
>RGD|2323085 [details] [associations]
symbol:LOC100359960 "ribosomal protein S2-like" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 EMBL:CH473948 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
Ensembl:ENSRNOT00000035386 Uniprot:G3V957
Length = 267
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 158 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 217
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 218 ISKTYSYLTPDLWKETVFTKSPYQE 242
>RGD|619887 [details] [associations]
symbol:Rps2 "ribosomal protein S2" species:10116 "Rattus
norvegicus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IMP] [GO:0001731 "formation of translation preinitiation
complex" evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO;IMP]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0017134 "fibroblast
growth factor binding" evidence=ISO] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO;IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0032403 "protein complex binding"
evidence=IMP] [GO:0071353 "cellular response to interleukin-4"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 RGD:619887 GO:GO:0032403 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000028 GO:GO:0001731
GO:GO:0022627 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
CTD:6187 GeneTree:ENSGT00390000001433 HOVERGEN:HBG000437
EMBL:X57432 EMBL:BC098726 IPI:IPI00392390 PIR:S18828
RefSeq:NP_114026.3 UniGene:Rn.2115 UniGene:Rn.220062
ProteinModelPortal:P27952 SMR:P27952 IntAct:P27952 STRING:P27952
PhosphoSite:P27952 PRIDE:P27952 Ensembl:ENSRNOT00000019508
GeneID:83789 KEGG:rno:83789 UCSC:RGD:619887 InParanoid:P27952
OMA:DSEGHIG NextBio:616365 ArrayExpress:P27952
Genevestigator:P27952 GermOnline:ENSRNOG00000014179 Uniprot:P27952
Length = 293
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 184 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 243
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 244 ISKTYSYLTPDLWKETVFTKSPYQE 268
>UNIPROTKB|E9PU05 [details] [associations]
symbol:LOC100359960 "Protein LOC100359960" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 IPI:IPI00781732
Ensembl:ENSRNOT00000002656 ArrayExpress:E9PU05 Uniprot:E9PU05
Length = 259
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 150 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 209
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 210 ISKTYSYLTPDLWKETVFTKSPYQE 234
>ZFIN|ZDB-GENE-040426-2454 [details] [associations]
symbol:rps2 "ribosomal protein S2" species:7955
"Danio rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 ZFIN:ZDB-GENE-040426-2454
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981
TIGRFAMs:TIGR01020 OMA:GIKDVWT CTD:6187
GeneTree:ENSGT00390000001433 HOVERGEN:HBG000437 OrthoDB:EOG4SXND8
EMBL:CR392027 EMBL:BC067645 IPI:IPI00493658 RefSeq:NP_998444.1
UniGene:Dr.32854 SMR:Q6NWC3 STRING:Q6NWC3
Ensembl:ENSDART00000110842 Ensembl:ENSDART00000138107 GeneID:406565
KEGG:dre:406565 InParanoid:Q6NWC3 NextBio:20818125 Uniprot:Q6NWC3
Length = 280
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 170 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 229
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 230 ISKTYSYLTPDLWKETVFTKSPYQE 254
>UNIPROTKB|E9PTY3 [details] [associations]
symbol:LOC100359960 "Protein LOC100359960" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
IPI:IPI00951764 Ensembl:ENSRNOT00000067137 ArrayExpress:E9PTY3
Uniprot:E9PTY3
Length = 297
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 47/66 (71%), Positives = 53/66 (80%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQH 88
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 184 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 243
Query: 89 ETSSYT 94
+ +Y+
Sbjct: 244 ISKTYS 249
>WB|WBGene00004471 [details] [associations]
symbol:rps-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0000003
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 OMA:FSMAPFQ TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 EMBL:FO080908 PIR:T34184
RefSeq:NP_501322.1 ProteinModelPortal:P51403 SMR:P51403
DIP:DIP-25206N IntAct:P51403 MINT:MINT-228946 STRING:P51403
PaxDb:P51403 PRIDE:P51403 EnsemblMetazoa:C49H3.11.1
EnsemblMetazoa:C49H3.11.2 EnsemblMetazoa:C49H3.11.3 GeneID:177583
KEGG:cel:CELE_C49H3.11 UCSC:C49H3.11.1 CTD:177583 WormBase:C49H3.11
InParanoid:P51403 NextBio:897468 Uniprot:P51403
Length = 272
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 49/67 (73%), Positives = 52/67 (77%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECN--T 86
VTGKC SV VRLIPAPRGTGIV APVPKKLL MAGIEDCYT+A+GST TLGNF +
Sbjct: 180 VTGKCASVMVRLIPAPRGTGIVSAPVPKKLLHMAGIEDCYTAAKGSTATLGNFAKATYAA 239
Query: 87 QHETSSY 93
T SY
Sbjct: 240 LQRTYSY 246
>RGD|1588815 [details] [associations]
symbol:LOC688473 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:1588815 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 IPI:IPI00958659
PRIDE:D3ZIY7 Ensembl:ENSRNOT00000060074 UCSC:RGD:1588815
OMA:CAGQRIR Uniprot:D3ZIY7
Length = 269
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 50/85 (58%), Positives = 56/85 (65%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG CGSV +RLIP PRGTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 160 VTGHCGSVLMRLIPTPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDP 219
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 220 ISKTYSYLTPDLWKETVFTKSPYQE 244
>MGI|MGI:3643826 [details] [associations]
symbol:Gm8225 "predicted gene 8225" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005840 "ribosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 MGI:MGI:3643826 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
HOGENOM:HOG000072596 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 EMBL:AC122252
IPI:IPI00875177 ProteinModelPortal:D3Z536 SMR:D3Z536 PRIDE:D3Z536
Ensembl:ENSMUST00000090257 OMA:LMASIDD Bgee:D3Z536 Uniprot:D3Z536
Length = 292
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 51/85 (60%), Positives = 57/85 (67%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECN--T 86
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MA I+DCYTSARG T TL NF +
Sbjct: 184 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLL-MASIDDCYTSARGCTATLSNFAKATFYA 242
Query: 87 QHETSSYTETQCMQVLVSSHFPISE 111
+T SY +V V + P E
Sbjct: 243 TSKTCSYLTPDLWKVTVFTQSPYQE 267
>RGD|1562399 [details] [associations]
symbol:RGD1562399 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:1562399 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 KO:K02981 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 IPI:IPI00358026
RefSeq:XP_001064690.1 RefSeq:XP_217412.3 Ensembl:ENSRNOT00000058491
GeneID:301438 KEGG:rno:301438 UCSC:RGD:1562399 CTD:301438
NextBio:648730 Uniprot:D3ZAS1
Length = 291
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 46/65 (70%), Positives = 50/65 (76%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQH 88
VTG+CGSV V LIPAPRGTGIV A VPKKLL MAGIEDCYTSARG T TLGNF +
Sbjct: 182 VTGRCGSVLVDLIPAPRGTGIVSALVPKKLLMMAGIEDCYTSARGCTATLGNFAKATFDA 241
Query: 89 ETSSY 93
+ +Y
Sbjct: 242 ISKTY 246
>UNIPROTKB|F1M5X9 [details] [associations]
symbol:F1M5X9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
IPI:IPI00188066 PRIDE:F1M5X9 Ensembl:ENSRNOT00000007876
Uniprot:F1M5X9
Length = 250
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 49/85 (57%), Positives = 54/85 (63%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+C S V LIPAPRGTGIV APVPKKLL MAGI DCYTSARG TLGNF +
Sbjct: 161 VTGRCASELVCLIPAPRGTGIVSAPVPKKLLMMAGINDCYTSARGCIATLGNFAKATFDA 220
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + FP E
Sbjct: 221 ISKTYSYLTPDLWKETVFTKFPYQE 245
>UNIPROTKB|J9P0D3 [details] [associations]
symbol:J9P0D3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 EMBL:AAEX03026702
Ensembl:ENSCAFT00000027736 OMA:DKEWISI Uniprot:J9P0D3
Length = 265
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 43/66 (65%), Positives = 51/66 (77%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQH 88
VTG+CG V V LIPAPRGTGIV APVP+KLL MAGI++CYTSARG T TLGNF +
Sbjct: 156 VTGRCGFVLVHLIPAPRGTGIVSAPVPEKLLMMAGIDNCYTSARGCTATLGNFAKATFDA 215
Query: 89 ETSSYT 94
+ +Y+
Sbjct: 216 ISKTYS 221
>RGD|1560789 [details] [associations]
symbol:RGD1560789 "similar to ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:1560789 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 EMBL:AC096051
IPI:IPI00201692 Ensembl:ENSRNOT00000028014 Uniprot:D4A577
Length = 272
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 50/93 (53%), Positives = 57/93 (61%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG CGSV V LIP PRGTGIV APVPKKLL MA I+DCYTSAR T TLGNF +
Sbjct: 175 VTGHCGSVLVCLIPTPRGTGIVSAPVPKKLLMMASIDDCYTSARVCTATLGNFAKATFDA 234
Query: 88 -HETSSYTETQCMQVLVSSHFPISESLNTISEI 119
+T SY + V + P E L T + +
Sbjct: 235 ISKTYSYLTPDLWKETVFTWSPYQEFLKTHTRV 267
>UNIPROTKB|F1S275 [details] [associations]
symbol:F1S275 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 EMBL:CU407229
Ensembl:ENSSSCT00000006592 Uniprot:F1S275
Length = 270
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 53/113 (46%), Positives = 65/113 (57%)
Query: 7 FWGHLMVTSGILFCQHKVLGLIVTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIED 66
+WG+ + L C+ VTG CG V V LIPAPRGTGIV PVPKKLL MAGIED
Sbjct: 147 YWGNKIGKPRTLPCK-------VTGCCGYVLVCLIPAPRGTGIVSTPVPKKLLMMAGIED 199
Query: 67 CYTSARGSTGTLGNFGECNTQHETSSYTE-TQCMQVLVSSHFPISESLNTISE 118
CYTSARG T TLGN + + Y T + LV + P E + +++
Sbjct: 200 CYTSARGCTATLGNLAKATLDAISKMYNYLTPISKELVFTKPPYQEFTDRLAK 252
>UNIPROTKB|F1LUE4 [details] [associations]
symbol:F1LUE4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 Pfam:PF03719 InterPro:IPR014720 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR13718 GeneTree:ENSGT00390000001433
IPI:IPI00188513 Ensembl:ENSRNOT00000015702 Uniprot:F1LUE4
Length = 158
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 48/83 (57%), Positives = 53/83 (63%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQH 88
VTG+CGSV V L PAPRGTGIV APVPKK L MAGI+DCYTSARG T LGNF + T
Sbjct: 52 VTGRCGSVLVGLFPAPRGTGIVSAPVPKKRLVMAGIDDCYTSARGCTAILGNFAKA-TFD 110
Query: 89 ETSSYTETQCMQVLVSSHFPISE 111
Y + V + FP E
Sbjct: 111 AIFKYLTPDLWKESVFTKFPSQE 133
>POMBASE|SPCC576.08c [details] [associations]
symbol:rps2 "40S ribosomal protein S2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0032040 "small-subunit processome" evidence=ISO]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 PomBase:SPCC576.08c EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 GO:GO:0002181 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0032040 GO:GO:0022627
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020 OMA:NPGVEAP
PIR:T41418 RefSeq:NP_588435.1 ProteinModelPortal:O74892 SMR:O74892
IntAct:O74892 STRING:O74892 PRIDE:O74892 EnsemblFungi:SPCC576.08c.1
GeneID:2539067 KEGG:spo:SPCC576.08c OrthoDB:EOG4T1MWN
NextBio:20800240 Uniprot:O74892
Length = 253
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNF 81
V+GKCGSV VRL+PAPRG G+V APV K+ LQ+AGIEDCYT +RGST TLGNF
Sbjct: 157 VSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNF 209
>UNIPROTKB|F1LUI9 [details] [associations]
symbol:F1LUI9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
IPI:IPI00564910 Ensembl:ENSRNOT00000014416 Uniprot:F1LUI9
Length = 287
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 44/66 (66%), Positives = 50/66 (75%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQH 88
VTG+CGSV VRLI P GTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 180 VTGRCGSVLVRLISTP-GTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 238
Query: 89 ETSSYT 94
+ +Y+
Sbjct: 239 ISKNYS 244
>UNIPROTKB|F1LZV8 [details] [associations]
symbol:F1LZV8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
IPI:IPI00567374 Ensembl:ENSRNOT00000045325 OMA:THTRVSI
Uniprot:F1LZV8
Length = 287
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 44/66 (66%), Positives = 50/66 (75%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQH 88
VTG+CGSV VRLI P GTGIV APVPKKLL MAGI+DCYTSARG T TLGNF +
Sbjct: 180 VTGRCGSVLVRLISTP-GTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 238
Query: 89 ETSSYT 94
+ +Y+
Sbjct: 239 ISKNYS 244
>DICTYBASE|DDB_G0293742 [details] [associations]
symbol:rps2 "ribosomal protein S2" species:44689
"Dictyostelium discoideum" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
dictyBase:DDB_G0293742 GenomeReviews:CM000155_GR GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AAFI02000219 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 KO:K02981 TIGRFAMs:TIGR01020
EMBL:X56297 PIR:S22297 RefSeq:XP_628967.1 ProteinModelPortal:P27685
STRING:P27685 PRIDE:P27685 EnsemblProtists:DDB0215391
GeneID:8629395 KEGG:ddi:DDB_G0293742 OMA:GLVENIH
ProtClustDB:PTZ00070 Uniprot:P27685
Length = 265
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNF 81
VTGKCGSV VRL+PAPRGTGIV A VPKKLLQ AG++D YTS+RG T T+GNF
Sbjct: 171 VTGKCGSVAVRLVPAPRGTGIVAARVPKKLLQYAGVDDVYTSSRGKTRTMGNF 223
>TAIR|locus:2016585 [details] [associations]
symbol:XW6 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0009506 GO:GO:0009507 GO:GO:0006412
Gene3D:3.30.160.20 EMBL:AB077822 EMBL:AC008051 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC082643 GO:GO:0022627
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
EMBL:AB008016 EMBL:AF386958 EMBL:AY072528 EMBL:AY088743
IPI:IPI00521681 PIR:T50673 RefSeq:NP_176134.1 UniGene:At.23094
UniGene:At.23348 UniGene:At.70116 HSSP:P02357
ProteinModelPortal:Q8L8Y0 SMR:Q8L8Y0 STRING:Q8L8Y0
EnsemblPlants:AT1G58380.1 GeneID:842207 KEGG:ath:AT1G58380
TAIR:At1g58380 HOGENOM:HOG000072596 InParanoid:Q8L8Y0 KO:K02981
OMA:FSMAPFQ PhylomeDB:Q8L8Y0 ProtClustDB:CLSN2679407
Genevestigator:Q8L8Y0 GermOnline:AT1G58380 TIGRFAMs:TIGR01020
Uniprot:Q8L8Y0
Length = 284
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNF 81
VTGKCGSV VR++PAPRG+GIV A VPKK+LQ AGI+D +TS+RGST TLGNF
Sbjct: 177 VTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNF 229
>TAIR|locus:504956181 [details] [associations]
symbol:AT1G58684 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618 GO:GO:0016020
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036 GO:GO:0022627
EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348 UniGene:At.70116
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 ProtClustDB:CLSN2679407
TIGRFAMs:TIGR01020 EMBL:AY065030 EMBL:AY120723 EMBL:AY133659
EMBL:AK220575 EMBL:BT025727 EMBL:AB008017 IPI:IPI00528173
PIR:T52466 RefSeq:NP_564737.1 RefSeq:NP_564740.1 RefSeq:NP_683443.1
UniGene:At.72872 UniGene:At.74837 ProteinModelPortal:Q93VB8
SMR:Q93VB8 IntAct:Q93VB8 STRING:Q93VB8 EnsemblPlants:AT1G58684.1
EnsemblPlants:AT1G58983.1 EnsemblPlants:AT1G59359.1 GeneID:842222
GeneID:842229 GeneID:842237 KEGG:ath:AT1G58684 KEGG:ath:AT1G58983
KEGG:ath:AT1G59359 TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359
InParanoid:Q93VB8 OMA:NPGVEAP PhylomeDB:Q93VB8
Genevestigator:Q93VB8 GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNF 81
VTGKCGSV VR++PAPRG+GIV A VPKK+LQ AGI+D +TS+RGST TLGNF
Sbjct: 177 VTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNF 229
>TAIR|locus:2826988 [details] [associations]
symbol:AT1G58983 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0005618 "cell wall" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618 GO:GO:0016020
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036 GO:GO:0022627
EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348 UniGene:At.70116
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 ProtClustDB:CLSN2679407
TIGRFAMs:TIGR01020 EMBL:AY065030 EMBL:AY120723 EMBL:AY133659
EMBL:AK220575 EMBL:BT025727 EMBL:AB008017 IPI:IPI00528173
PIR:T52466 RefSeq:NP_564737.1 RefSeq:NP_564740.1 RefSeq:NP_683443.1
UniGene:At.72872 UniGene:At.74837 ProteinModelPortal:Q93VB8
SMR:Q93VB8 IntAct:Q93VB8 STRING:Q93VB8 EnsemblPlants:AT1G58684.1
EnsemblPlants:AT1G58983.1 EnsemblPlants:AT1G59359.1 GeneID:842222
GeneID:842229 GeneID:842237 KEGG:ath:AT1G58684 KEGG:ath:AT1G58983
KEGG:ath:AT1G59359 TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359
InParanoid:Q93VB8 OMA:NPGVEAP PhylomeDB:Q93VB8
Genevestigator:Q93VB8 GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNF 81
VTGKCGSV VR++PAPRG+GIV A VPKK+LQ AGI+D +TS+RGST TLGNF
Sbjct: 177 VTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNF 229
>TAIR|locus:2826968 [details] [associations]
symbol:AT1G59359 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618
GO:GO:0016020 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036
GO:GO:0022627 EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348
UniGene:At.70116 HSSP:P02357 HOGENOM:HOG000072596 KO:K02981
ProtClustDB:CLSN2679407 TIGRFAMs:TIGR01020 EMBL:AY065030
EMBL:AY120723 EMBL:AY133659 EMBL:AK220575 EMBL:BT025727
EMBL:AB008017 IPI:IPI00528173 PIR:T52466 RefSeq:NP_564737.1
RefSeq:NP_564740.1 RefSeq:NP_683443.1 UniGene:At.72872
UniGene:At.74837 ProteinModelPortal:Q93VB8 SMR:Q93VB8 IntAct:Q93VB8
STRING:Q93VB8 EnsemblPlants:AT1G58684.1 EnsemblPlants:AT1G58983.1
EnsemblPlants:AT1G59359.1 GeneID:842222 GeneID:842229 GeneID:842237
KEGG:ath:AT1G58684 KEGG:ath:AT1G58983 KEGG:ath:AT1G59359
TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359 InParanoid:Q93VB8
OMA:NPGVEAP PhylomeDB:Q93VB8 Genevestigator:Q93VB8
GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNF 81
VTGKCGSV VR++PAPRG+GIV A VPKK+LQ AGI+D +TS+RGST TLGNF
Sbjct: 177 VTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNF 229
>TAIR|locus:2054406 [details] [associations]
symbol:AT2G41840 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0006412
Gene3D:3.30.160.20 EMBL:AC002339 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981
ProtClustDB:CLSN2679407 TIGRFAMs:TIGR01020 EMBL:AY048250
EMBL:AY133561 EMBL:Z17622 IPI:IPI00533598 PIR:G84846
RefSeq:NP_181715.1 UniGene:At.12251 UniGene:At.67324
ProteinModelPortal:P49688 SMR:P49688 IntAct:P49688 STRING:P49688
PaxDb:P49688 PRIDE:P49688 EnsemblPlants:AT2G41840.1 GeneID:818784
KEGG:ath:AT2G41840 TAIR:At2g41840 InParanoid:P49688 OMA:QIEQIYL
PhylomeDB:P49688 Genevestigator:P49688 GermOnline:AT2G41840
Uniprot:P49688
Length = 285
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNF 81
VTGKCGSV VR++PAPRG+GIV A VPKK+LQ AGI+D +TS+RGST TLGNF
Sbjct: 178 VTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNF 230
>TAIR|locus:2103539 [details] [associations]
symbol:AT3G57490 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS;IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 EMBL:AL133248
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HSSP:P02357 HOGENOM:HOG000072596
KO:K02981 ProtClustDB:CLSN2679407 TIGRFAMs:TIGR01020 EMBL:BT006200
EMBL:AY084252 EMBL:AK228054 IPI:IPI00516307 PIR:T46185
RefSeq:NP_191308.1 UniGene:At.34827 ProteinModelPortal:Q9SCM3
SMR:Q9SCM3 STRING:Q9SCM3 PaxDb:Q9SCM3 PRIDE:Q9SCM3
EnsemblPlants:AT3G57490.1 GeneID:824916 KEGG:ath:AT3G57490
TAIR:At3g57490 InParanoid:Q9SCM3 OMA:GIKDVWT PhylomeDB:Q9SCM3
Genevestigator:Q9SCM3 GermOnline:AT3G57490 Uniprot:Q9SCM3
Length = 276
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNF 81
VTGKCGSV VR++PAPRG+GIV A VPKK+LQ AGI+D +TS+RGST TLGNF
Sbjct: 169 VTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNF 221
>RGD|1586357 [details] [associations]
symbol:LOC689943 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 Pfam:PF03719 RGD:1586357
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR13718 GeneTree:ENSGT00390000001433 IPI:IPI00567447
Ensembl:ENSRNOT00000050867 OMA:MARIEDC Uniprot:F1LVD1
Length = 192
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 44/85 (51%), Positives = 54/85 (63%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG+CGS+ V LIP+PRGTGIV A VPKKLL M+ +DCY SARG T TLGNF + +
Sbjct: 84 VTGRCGSMLVYLIPSPRGTGIVSASVPKKLLLMSVTDDCYNSARGCTATLGNFAKASFDA 143
Query: 88 -HETSSYTETQCMQVLVSSHFPISE 111
+T SY + V + P E
Sbjct: 144 ISKTYSYLTADLWKETVFTKSPYQE 168
>UNIPROTKB|J9PAX1 [details] [associations]
symbol:J9PAX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 EMBL:AAEX03012471
Ensembl:ENSCAFT00000029347 Uniprot:J9PAX1
Length = 218
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 39/66 (59%), Positives = 46/66 (69%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQH 88
VT CGSV VRLIPAP+GTGIV APVPKKLL MAG + CY SARG LG+F +
Sbjct: 125 VTCLCGSVLVRLIPAPKGTGIVSAPVPKKLLMMAGTDHCYPSARGCPAALGHFAKATFDA 184
Query: 89 ETSSYT 94
+ +Y+
Sbjct: 185 VSKTYS 190
>UNIPROTKB|F1LVB4 [details] [associations]
symbol:F1LVB4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 IPI:IPI00569467 PRIDE:F1LVB4
Ensembl:ENSRNOT00000035389 Uniprot:F1LVB4
Length = 271
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 40/55 (72%), Positives = 42/55 (76%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGE 83
VTG C SV V LIP PRGTGIV APVPKK MA I+DCYTSARG T TLGNF +
Sbjct: 163 VTGCCDSVLVCLIPTPRGTGIVSAPVPKKFPIMACIDDCYTSARGCTATLGNFAK 217
>GENEDB_PFALCIPARUM|PF14_0448 [details] [associations]
symbol:PF14_0448 "ribosomal protein S2,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 EMBL:AE014187 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 PANTHER:PTHR13718
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
ProtClustDB:PTZ00070 OMA:DSEGHIG RefSeq:XP_001348622.1
ProteinModelPortal:Q8IL02 SMR:Q8IL02 MINT:MINT-1571495 PRIDE:Q8IL02
EnsemblProtists:PF14_0448:mRNA GeneID:812030 KEGG:pfa:PF14_0448
EuPathDB:PlasmoDB:PF3D7_1447000 Uniprot:Q8IL02
Length = 272
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 41/85 (48%), Positives = 52/85 (61%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGEC--NT 86
V+GKCGSV++RL+PAPRGT IVGAP KK+L AGI+DC++S+ G T T GNF N
Sbjct: 170 VSGKCGSVRIRLVPAPRGTQIVGAPTTKKMLNFAGIKDCFSSSCGKTKTKGNFLRAIFNA 229
Query: 87 QHETSSYTETQCMQVLVSSHFPISE 111
+T Y +V P E
Sbjct: 230 LSKTYGYLTPDLWKVTNFDKSPYEE 254
>UNIPROTKB|Q8IL02 [details] [associations]
symbol:PF14_0448 "40S ribosomal protein S2, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
EMBL:AE014187 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 PANTHER:PTHR13718
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
ProtClustDB:PTZ00070 OMA:DSEGHIG RefSeq:XP_001348622.1
ProteinModelPortal:Q8IL02 SMR:Q8IL02 MINT:MINT-1571495 PRIDE:Q8IL02
EnsemblProtists:PF14_0448:mRNA GeneID:812030 KEGG:pfa:PF14_0448
EuPathDB:PlasmoDB:PF3D7_1447000 Uniprot:Q8IL02
Length = 272
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 41/85 (48%), Positives = 52/85 (61%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGEC--NT 86
V+GKCGSV++RL+PAPRGT IVGAP KK+L AGI+DC++S+ G T T GNF N
Sbjct: 170 VSGKCGSVRIRLVPAPRGTQIVGAPTTKKMLNFAGIKDCFSSSCGKTKTKGNFLRAIFNA 229
Query: 87 QHETSSYTETQCMQVLVSSHFPISE 111
+T Y +V P E
Sbjct: 230 LSKTYGYLTPDLWKVTNFDKSPYEE 254
>UNIPROTKB|F1LUJ6 [details] [associations]
symbol:F1LUJ6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
GeneTree:ENSGT00390000001433 IPI:IPI00949941
Ensembl:ENSRNOT00000003897 Uniprot:F1LUJ6
Length = 218
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 40/69 (57%), Positives = 51/69 (73%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMA-GIEDCYTSARGSTGTLGNFGE---C 84
VTG+C SV V LIPAPRGTGIV +PVP+KLL + GI DC+T+ARG TLG+F + C
Sbjct: 130 VTGRCSSVLVHLIPAPRGTGIVSSPVPRKLLMLKDGIADCHTAARGHNTTLGSFAKADIC 189
Query: 85 NTQHETSSY 93
++ +T SY
Sbjct: 190 DSIFKTYSY 198
>UNIPROTKB|F1LUA6 [details] [associations]
symbol:F1LUA6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 Pfam:PF03719 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
IPI:IPI00561961 Ensembl:ENSRNOT00000051118 OMA:NIAKATY
Uniprot:F1LUA6
Length = 127
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 37/57 (64%), Positives = 42/57 (73%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECN 85
VTG CGSV VRLI AP GTGIV PVPKK+L M GI+DCY S +G TLGNF + +
Sbjct: 47 VTGCCGSVPVRLISAPGGTGIVSVPVPKKVLMMTGIDDCYISGKGCMTTLGNFAKAS 103
>CGD|CAL0004119 [details] [associations]
symbol:RPS21 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IEA] [GO:0070181 "SSU rRNA
binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006407 "rRNA export from nucleus"
evidence=IEA] [GO:0045903 "positive regulation of translational
fidelity" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 CGD:CAL0004119 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 EMBL:AACQ01000045
EMBL:AACQ01000042 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
RefSeq:XP_718157.1 RefSeq:XP_718427.1 STRING:Q5A900 GeneID:3639967
GeneID:3640242 KEGG:cal:CaO19.10845 KEGG:cal:CaO19.3334
Uniprot:Q5A900
Length = 249
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 37/52 (71%), Positives = 43/52 (82%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGN 80
VTGKCGSV VRLIPAPRG GIV +PV K+L+Q+AG+ED YTS+ GST T N
Sbjct: 153 VTGKCGSVAVRLIPAPRGKGIVASPVVKRLMQLAGVEDVYTSSSGSTRTTEN 204
>SGD|S000003091 [details] [associations]
symbol:RPS2 "Protein component of the small (40S) subunit"
species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IMP]
[GO:0070181 "SSU rRNA binding" evidence=IDA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0006407 "rRNA export
from nucleus" evidence=IMP] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 SGD:S000003091 InterPro:IPR014720 GO:GO:0005730
EMBL:BK006941 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0032040 GO:GO:0070181
GO:GO:0045903 PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30
PDBsum:3U5C PDBsum:3U5G EMBL:X94106 GO:GO:0006407 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585 PDB:1K5X
PDBsum:1K5X HOGENOM:HOG000072596 KO:K02981 OMA:FSMAPFQ
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 OrthoDB:EOG4T1MWN
EMBL:M59375 EMBL:Z72645 EMBL:AY557815 PIR:A36363 RefSeq:NP_011392.1
ProteinModelPortal:P25443 SMR:P25443 IntAct:P25443 STRING:P25443
PaxDb:P25443 PeptideAtlas:P25443 EnsemblFungi:YGL123W GeneID:852754
KEGG:sce:YGL123W EvolutionaryTrace:P25443 NextBio:972192
Genevestigator:P25443 GermOnline:YGL123W Uniprot:P25443
Length = 254
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 36/51 (70%), Positives = 41/51 (80%)
Query: 30 TGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGN 80
TGKCGSV VRLIPAPRG+GIV +P KKLLQ+AG+ED YT + G T TL N
Sbjct: 159 TGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLEN 209
>UNIPROTKB|F1M9M7 [details] [associations]
symbol:F1M9M7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 Pfam:PF03719 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
IPI:IPI00779798 Ensembl:ENSRNOT00000037793 Uniprot:F1M9M7
Length = 140
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 41/67 (61%), Positives = 45/67 (67%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQ- 87
VTG CGSV V LIPA RGTGI APVP K L MAGI+DCYTSARG T +L F +
Sbjct: 20 VTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCTASLDYFAQATFDA 79
Query: 88 -HETSSY 93
+T SY
Sbjct: 80 IFKTYSY 86
>UNIPROTKB|G4MPT3 [details] [associations]
symbol:MGG_16248 "30S ribosomal protein S5" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 EMBL:CM001231 GO:GO:0043581
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 TIGRFAMs:TIGR01020 RefSeq:XP_003709842.1
ProteinModelPortal:G4MPT3 SMR:G4MPT3 EnsemblFungi:MGG_16248T0
GeneID:12985269 KEGG:mgr:MGG_16248 Uniprot:G4MPT3
Length = 265
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 36/51 (70%), Positives = 42/51 (82%)
Query: 30 TGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGN 80
+GKCGSV VRLIPAPRGT +V +P K+LLQ+AGIED YTS+ GST TL N
Sbjct: 171 SGKCGSVTVRLIPAPRGTALVASPAVKRLLQLAGIEDAYTSSSGSTKTLEN 221
>ASPGD|ASPL0000036430 [details] [associations]
symbol:AN3413 species:162425 "Emericella nidulans"
[GO:0006407 "rRNA export from nucleus" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IEA]
[GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
EMBL:BN001306 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000055 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981
TIGRFAMs:TIGR01020 OMA:DSEGHIG OrthoDB:EOG4T1MWN RefSeq:XP_661017.1
ProteinModelPortal:Q5B7R7 SMR:Q5B7R7 STRING:Q5B7R7
EnsemblFungi:CADANIAT00009625 GeneID:2874304 KEGG:ani:AN3413.2
Uniprot:Q5B7R7
Length = 259
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 30 TGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGN 80
+ KCGSV VRLIPAPRGTG+V +P K+LLQ+AG++D YTS+ GST TL N
Sbjct: 165 SAKCGSVSVRLIPAPRGTGLVASPAVKRLLQLAGVQDAYTSSSGSTKTLEN 215
>UNIPROTKB|F1M103 [details] [associations]
symbol:F1M103 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 Pfam:PF03719 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
IPI:IPI00557027 Ensembl:ENSRNOT00000045740 Uniprot:F1M103
Length = 149
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 36/64 (56%), Positives = 43/64 (67%)
Query: 31 GKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQHET 90
G C SV V LIPAPRGTGIV PV KKLL MA I++ Y+SARG T TL NF + +
Sbjct: 21 GLCSSVSVCLIPAPRGTGIVSGPVLKKLLMMASIDNYYSSARGYTATLSNFAKTTFDDIS 80
Query: 91 SSYT 94
+Y+
Sbjct: 81 KTYS 84
>UNIPROTKB|E9PMM9 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 HGNC:HGNC:10404 IPI:IPI00985370
ProteinModelPortal:E9PMM9 SMR:E9PMM9 PRIDE:E9PMM9
Ensembl:ENST00000527302 ArrayExpress:E9PMM9 Bgee:E9PMM9
Uniprot:E9PMM9
Length = 218
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 31/35 (88%), Positives = 32/35 (91%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAG 63
VTG+CGSV VRLIPAPRGTGIV APVPKKLL MAG
Sbjct: 184 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAG 218
>RGD|1589430 [details] [associations]
symbol:LOC680646 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 RGD:1589430 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR13718 GeneTree:ENSGT00390000001433 IPI:IPI00557169
Ensembl:ENSRNOT00000036337 Uniprot:F1M0D1
Length = 210
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 36/65 (55%), Positives = 41/65 (63%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNFGECNTQH 88
VT GSV V LIPAPRGTGIV APV K L AGI +CY SAR T TL NF + +
Sbjct: 103 VTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYNFSKPTIEV 162
Query: 89 ETSSY 93
+ +Y
Sbjct: 163 ISKTY 167
>UNIPROTKB|F1M474 [details] [associations]
symbol:F1M474 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
IPI:IPI00565365 Ensembl:ENSRNOT00000044113 Uniprot:F1M474
Length = 222
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 38/87 (43%), Positives = 50/87 (57%)
Query: 9 GHLMVTSGILFCQHKVLGL--IVTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIED 66
GH V G+ + + V+ + +T ++ V LIPAPR T IV PV KKLL MAGI+D
Sbjct: 95 GH--VGLGVKYSKELVIVIQGAITAAV-TLLVGLIPAPRATVIVSVPVLKKLLVMAGIDD 151
Query: 67 CYTSARGSTGTLGNFGECNTQHETSSY 93
CYT RG TLGNF + + +Y
Sbjct: 152 CYTLVRGCAATLGNFAKATFDAISKTY 178
>UNIPROTKB|F1PW41 [details] [associations]
symbol:F1PW41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR013810 Pfam:PF00333
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR13718 GeneTree:ENSGT00390000001433 EMBL:AAEX03002492
Ensembl:ENSCAFT00000024499 Uniprot:F1PW41
Length = 193
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 34/77 (44%), Positives = 42/77 (54%)
Query: 4 LQLFWGHLMVTSGILFCQHKVLGLIVTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAG 63
+ + WG SG + + VT SV V I APRGT I+ APVPKKLL+MA
Sbjct: 66 IAIAWGGW---SGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMAS 122
Query: 64 IEDCYTSARGSTGTLGN 80
I+D + ARG T L N
Sbjct: 123 IDDGDSLARGCTAILDN 139
>UNIPROTKB|J9P3M6 [details] [associations]
symbol:J9P3M6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR013810 Pfam:PF00333
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR014721 PANTHER:PTHR13718 GeneTree:ENSGT00390000001433
EMBL:AAEX03010296 Ensembl:ENSCAFT00000008016 Uniprot:J9P3M6
Length = 269
Score = 126 (49.4 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 22 HKVLGLIVTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTLGNF 81
H +L + TG ++ + P P+G G+V APVPKKLL + G EDC S R TG LG+
Sbjct: 163 HTILCQVTTG---ALSWYVSP-PQGPGVVSAPVPKKLLMLVGTEDCCPSPRNCTGALGDL 218
Query: 82 GECNT 86
+ ++
Sbjct: 219 AKASS 223
>TIGR_CMR|CHY_2292 [details] [associations]
symbol:CHY_2292 "ribosomal protein S5" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT
ProtClustDB:PRK00550 HAMAP:MF_01307_B RefSeq:YP_361101.1
ProteinModelPortal:Q3A9T3 SMR:Q3A9T3 STRING:Q3A9T3 GeneID:3727429
KEGG:chy:CHY_2292 PATRIC:21277655
BioCyc:CHYD246194:GJCN-2291-MONOMER Uniprot:Q3A9T3
Length = 167
Score = 90 (36.7 bits), Expect = 0.00029, P = 0.00029
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 29 VTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGS 74
+ G+ G+ +V L PA GTG++ + +L+MAG+ D T + GS
Sbjct: 85 IIGEAGAGKVLLKPAAPGTGVIAGSAVRAILEMAGVRDILTKSLGS 130
>TIGR_CMR|CPS_0618 [details] [associations]
symbol:CPS_0618 "ribosomal protein S5" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT HAMAP:MF_01307_B
RefSeq:YP_267368.1 ProteinModelPortal:Q488Z6 SMR:Q488Z6
STRING:Q488Z6 PRIDE:Q488Z6 GeneID:3519484 KEGG:cps:CPS_0618
PATRIC:21464563 BioCyc:CPSY167879:GI48-705-MONOMER Uniprot:Q488Z6
Length = 169
Score = 90 (36.7 bits), Expect = 0.00030, P = 0.00030
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 28 IVTGKCGSVQVRLIPAPRGTGIVGAPVPKKLLQMAGIEDCYTSARGSTGTL 78
++TGK +V + PA GTGI+ + +L++AG+++ + A GST +
Sbjct: 87 VITGKHSGSKVFMKPASEGTGIIAGGAMRAVLEVAGVQNVLSKAYGSTNPI 137
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 123 123 0.00091 102 3 11 22 0.36 31
29 0.50 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 56
No. of states in DFA: 560 (60 KB)
Total size of DFA: 125 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.70u 0.09s 11.79t Elapsed: 00:00:00
Total cpu time: 11.70u 0.09s 11.79t Elapsed: 00:00:00
Start: Thu Aug 15 17:19:19 2013 End: Thu Aug 15 17:19:19 2013