Query psy12296
Match_columns 433
No_of_seqs 290 out of 2424
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 15:20:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gsl_A Disks large homolog 4; 99.9 3.4E-24 1.2E-28 196.6 20.6 164 3-193 15-192 (196)
2 3r0h_A INAD, inactivation-NO-a 99.9 2.1E-23 7.3E-28 193.9 19.1 160 3-191 28-196 (206)
3 2qt5_A Glutamate receptor-inte 99.9 1.1E-22 3.8E-27 188.8 20.4 171 3-192 18-196 (200)
4 1p1d_A PDZ45, glutamate recept 99.9 1.8E-21 6.2E-26 180.3 19.6 167 3-191 17-195 (196)
5 2xkx_A Disks large homolog 4; 99.8 3E-20 1E-24 203.8 19.7 164 3-193 69-246 (721)
6 3rle_A Golgi reassembly-stacki 99.8 1.1E-18 3.8E-23 163.7 17.4 163 5-192 3-171 (209)
7 2xkx_A Disks large homolog 4; 99.8 2E-18 6.8E-23 189.4 20.5 186 4-192 165-392 (721)
8 1w9e_A Syntenin 1; cell adhesi 99.8 1E-17 3.5E-22 151.1 20.1 146 3-188 15-163 (166)
9 4a8c_A Periplasmic PH-dependen 99.8 1.8E-17 6.3E-22 171.8 21.5 170 5-197 241-426 (436)
10 3suz_A Amyloid beta A4 precurs 99.8 1.4E-19 4.8E-24 185.2 5.5 158 3-196 215-379 (388)
11 3pv2_A DEGQ; trypsin fold, PDZ 99.7 6.3E-17 2.2E-21 168.5 17.8 171 4-196 258-448 (451)
12 1ky9_A Protease DO, DEGP, HTRA 99.6 3.7E-16 1.3E-20 162.6 3.1 156 17-195 285-444 (448)
13 4fln_A Protease DO-like 2, chl 99.5 7.3E-13 2.5E-17 140.4 20.9 185 4-197 253-478 (539)
14 4amh_A Disks large homolog 1; 99.5 1.8E-13 6.1E-18 114.7 11.9 74 3-76 12-92 (106)
15 2q3g_A PDZ and LIM domain prot 99.5 1.4E-13 4.8E-18 111.2 9.2 74 3-76 12-86 (89)
16 2uzc_A Human pdlim5, PDZ and L 99.5 1.9E-13 6.3E-18 110.1 9.6 74 3-76 12-86 (88)
17 1rgw_A ZAsp protein; PDZ, cyph 99.4 1.7E-13 5.7E-18 109.5 8.2 74 3-76 10-84 (85)
18 2pa1_A PDZ and LIM domain prot 99.4 3E-13 1E-17 108.8 9.5 74 3-76 11-85 (87)
19 2pkt_A PDZ and LIM domain prot 99.4 3.4E-13 1.1E-17 109.4 9.7 74 3-76 12-86 (91)
20 1qav_A Alpha-1 syntrophin (res 99.4 5.1E-13 1.7E-17 108.1 9.3 73 3-75 15-89 (90)
21 1ihj_A INAD; intermolecular di 99.4 5.8E-13 2E-17 109.3 8.9 74 3-76 16-97 (98)
22 2jik_A Synaptojanin-2 binding 99.4 1.2E-12 4.2E-17 108.1 10.7 74 3-76 17-97 (101)
23 1wi2_A Riken cDNA 2700099C19; 99.4 6.8E-13 2.3E-17 110.5 9.0 74 3-76 26-99 (104)
24 1uez_A KIAA1526 protein; PDZ d 99.4 3.9E-13 1.3E-17 111.2 7.5 76 3-78 20-95 (101)
25 2w4f_A Protein LAP4; structura 99.4 1E-12 3.5E-17 107.5 9.9 74 3-76 13-93 (97)
26 2i04_A Membrane-associated gua 99.4 1.1E-12 3.8E-17 104.8 9.7 72 3-74 10-85 (85)
27 2q9v_A Membrane-associated gua 99.4 9.5E-13 3.2E-17 106.4 9.4 74 3-76 12-89 (90)
28 2eeh_A PDZ domain-containing p 99.4 1.3E-12 4.6E-17 107.8 10.3 75 4-78 22-96 (100)
29 2eeg_A PDZ and LIM domain prot 99.4 5E-13 1.7E-17 109.2 7.6 74 3-76 17-91 (94)
30 2i1n_A Discs, large homolog 3; 99.4 1.1E-12 3.6E-17 108.7 9.5 75 3-77 14-95 (102)
31 1n7e_A AMPA receptor interacti 99.4 1.4E-12 4.7E-17 107.1 10.0 74 3-76 15-90 (97)
32 3b76_A E3 ubiquitin-protein li 99.4 1.2E-12 4E-17 112.2 9.9 74 3-76 35-113 (118)
33 2fe5_A Presynaptic protein SAP 99.4 1.5E-12 5.3E-17 105.8 10.0 74 3-76 13-93 (94)
34 2dc2_A GOPC, golgi associated 99.4 8.9E-13 3E-17 109.8 8.8 75 3-77 20-96 (103)
35 2r4h_A Membrane-associated gua 99.4 1.2E-12 4.1E-17 110.6 9.7 74 3-76 34-109 (112)
36 1uep_A Membrane associated gua 99.4 6.5E-13 2.2E-17 110.4 7.8 74 3-76 19-96 (103)
37 1ueq_A Membrane associated gua 99.4 2.3E-12 7.9E-17 110.7 11.5 75 3-77 29-107 (123)
38 2opg_A Multiple PDZ domain pro 99.4 2.2E-12 7.4E-17 105.9 10.7 74 3-76 14-90 (98)
39 1d5g_A Human phosphatase HPTP1 99.4 2.1E-12 7.3E-17 105.5 10.6 74 3-76 15-93 (96)
40 2awx_A Synapse associated prot 99.4 1.6E-12 5.4E-17 108.4 10.0 74 3-76 13-93 (105)
41 4e34_A Golgi-associated PDZ an 99.4 1.1E-12 3.6E-17 105.4 8.6 72 3-74 13-86 (87)
42 1ujd_A KIAA0559 protein; PDZ d 99.4 9.2E-13 3.2E-17 112.2 8.6 74 3-76 29-109 (117)
43 2he4_A Na(+)/H(+) exchange reg 99.4 2.1E-12 7.3E-17 104.4 10.3 73 3-76 14-87 (90)
44 2v90_A PDZ domain-containing p 99.4 1.6E-12 5.5E-17 106.4 9.5 74 3-76 13-89 (96)
45 1uhp_A Hypothetical protein KI 99.4 1.9E-12 6.5E-17 108.2 10.1 75 3-77 18-102 (107)
46 2iwo_A Multiple PDZ domain pro 99.4 5.4E-13 1.8E-17 114.4 6.9 73 4-76 36-113 (120)
47 1m5z_A GRIP, AMPA receptor int 99.4 2.3E-12 8E-17 104.2 10.2 71 4-75 19-90 (91)
48 2vwr_A Ligand of NUMB protein 99.4 2E-12 6.8E-17 105.6 9.8 73 3-76 15-89 (95)
49 1x5q_A LAP4 protein; PDZ domai 99.4 2.6E-12 8.8E-17 107.9 10.6 75 3-77 25-106 (110)
50 2byg_A Channel associated prot 99.4 1.8E-12 6.3E-17 110.6 9.8 74 3-76 34-114 (117)
51 2jil_A GRIP1 protein, glutamat 99.4 1.6E-12 5.6E-17 106.4 9.0 74 3-76 13-92 (97)
52 2dkr_A LIN-7 homolog B; LIN-7B 99.4 1.3E-12 4.4E-17 106.1 8.3 74 3-76 15-90 (93)
53 1r6j_A Syntenin 1; PDZ, membra 99.4 1.4E-12 4.7E-17 105.0 8.0 65 3-74 15-80 (82)
54 3nfk_A Tyrosine-protein phosph 99.4 1.7E-12 5.9E-17 108.3 8.8 72 3-74 28-106 (107)
55 1wf7_A Enigma homologue protei 99.4 5.5E-13 1.9E-17 110.8 5.7 74 3-76 14-88 (103)
56 1mfg_A ERB-B2 interacting prot 99.4 2.8E-12 9.5E-17 104.7 9.5 73 3-76 12-93 (95)
57 1i16_A Interleukin 16, LCF; cy 99.3 1E-12 3.4E-17 114.2 6.8 74 3-76 39-118 (130)
58 3k1r_A Harmonin; protein-prote 99.3 2.9E-12 1E-16 118.3 10.2 76 3-78 95-170 (192)
59 2qg1_A Multiple PDZ domain pro 99.3 3.1E-12 1.1E-16 103.7 9.1 73 3-76 15-89 (92)
60 2ego_A General receptor for ph 99.3 2.9E-12 1E-16 105.0 9.0 72 3-74 15-94 (96)
61 1q3o_A Shank1; PDZ, GKAP, pept 99.3 4.3E-12 1.5E-16 106.4 10.2 74 3-76 18-104 (109)
62 1wfg_A Regulating synaptic mem 99.3 2.1E-12 7.3E-17 112.4 8.6 74 3-76 47-127 (131)
63 3hpk_A Protein interacting wit 99.3 3.6E-12 1.2E-16 109.6 9.9 74 3-76 30-105 (125)
64 3l4f_D SH3 and multiple ankyri 99.3 2.8E-12 9.7E-17 111.8 9.2 74 3-76 38-124 (132)
65 2eno_A Synaptojanin-2-binding 99.3 3.7E-12 1.3E-16 108.7 9.7 74 3-76 27-107 (120)
66 3sfj_A TAX1-binding protein 3; 99.3 5.9E-12 2E-16 104.4 10.6 71 5-75 20-104 (104)
67 2ehr_A INAD-like protein; PDZ 99.3 2.4E-12 8.1E-17 109.3 8.3 74 3-76 26-110 (117)
68 2d92_A INAD-like protein; PDZ 99.3 1.7E-12 5.9E-17 108.9 7.4 74 3-76 25-105 (108)
69 1vb7_A PDZ and LIM domain 2; P 99.3 7.9E-13 2.7E-17 108.0 5.1 74 3-76 15-89 (94)
70 1wha_A KIAA0147 protein, scrib 99.3 2.5E-12 8.5E-17 107.2 8.2 74 3-76 17-98 (105)
71 3axa_A Afadin, nectin-3, prote 99.3 3.8E-12 1.3E-16 106.1 9.3 75 3-77 20-99 (106)
72 3cbz_A Dishevelled-2; PDZ doma 99.3 2.5E-12 8.5E-17 108.1 8.1 74 3-76 16-96 (108)
73 2jre_A C60-1 PDZ domain peptid 99.3 3.6E-12 1.2E-16 106.5 9.0 74 3-76 24-104 (108)
74 2kpk_A Membrane-associated gua 99.3 3.1E-12 1.1E-16 110.8 8.9 76 3-78 28-107 (129)
75 2fne_A Multiple PDZ domain pro 99.3 1.7E-12 5.8E-17 110.8 6.7 74 3-76 35-113 (117)
76 3i4w_A Disks large homolog 4; 99.3 6E-12 2E-16 104.2 9.6 73 3-76 21-95 (104)
77 2dls_A PDZ-rhogef, RHO guanine 99.3 5.7E-12 1.9E-16 102.8 9.3 70 3-76 18-87 (93)
78 1wi4_A Synip, syntaxin binding 99.3 4.6E-12 1.6E-16 106.7 8.9 74 3-76 24-105 (109)
79 1ufx_A KIAA1526 protein; PDZ d 99.3 2.6E-12 8.8E-17 107.3 7.1 75 3-77 16-98 (103)
80 1g9o_A NHE-RF; PDZ domain, com 99.3 1.2E-11 3.9E-16 100.1 10.7 71 3-74 13-84 (91)
81 2db5_A INAD-like protein; PDZ 99.3 2.8E-12 9.7E-17 110.7 7.5 73 4-76 37-115 (128)
82 2djt_A Unnamed protein product 99.3 3E-12 1E-16 106.3 7.3 75 3-77 21-99 (104)
83 2pa1_A PDZ and LIM domain prot 99.3 6.4E-12 2.2E-16 100.9 8.9 82 110-192 4-86 (87)
84 2cs5_A Tyrosine-protein phosph 99.3 2.1E-12 7.1E-17 110.0 6.3 74 3-76 26-106 (119)
85 1um1_A KIAA1849 protein, RSGI 99.3 7.3E-12 2.5E-16 105.0 9.6 74 3-76 18-96 (110)
86 2daz_A INAD-like protein; PDZ 99.3 5.7E-12 2E-16 108.2 8.9 74 3-76 35-111 (124)
87 2h2b_A Tight junction protein 99.3 9.2E-12 3.2E-16 103.8 9.8 74 3-77 18-98 (107)
88 1v62_A KIAA1719 protein; struc 99.3 4.8E-12 1.6E-16 107.8 8.1 75 3-77 26-103 (117)
89 1wf8_A Neurabin-I; PDZ domain, 99.3 5.5E-12 1.9E-16 105.4 8.3 74 3-76 19-100 (107)
90 3o46_A Maguk P55 subfamily mem 99.3 8.8E-12 3E-16 101.4 9.3 73 3-76 14-88 (93)
91 1v6b_A Harmonin isoform A1; st 99.3 4.5E-12 1.5E-16 108.2 7.9 74 3-76 27-107 (118)
92 1wfv_A Membrane associated gua 99.3 1.3E-12 4.5E-17 108.0 4.3 73 4-76 22-96 (103)
93 2qbw_A PDZ-fibronectin fusion 99.3 1.1E-11 3.7E-16 113.8 10.8 71 3-74 1-80 (195)
94 2f5y_A Regulator of G-protein 99.3 1.2E-11 4E-16 100.4 9.5 70 3-76 13-83 (91)
95 3gge_A PDZ domain-containing p 99.3 1.3E-11 4.5E-16 101.8 9.9 71 3-75 15-89 (95)
96 2vz5_A TAX1-binding protein 3; 99.3 1.2E-11 4.3E-16 108.7 10.4 73 4-76 38-124 (139)
97 1uju_A Scribble; PDZ domain, c 99.3 2.1E-12 7.3E-17 108.6 5.2 74 3-76 20-104 (111)
98 1n7t_A 99-MER peptide of densi 99.3 4.3E-12 1.5E-16 105.3 6.8 73 3-76 20-101 (103)
99 2o2t_A Multiple PDZ domain pro 99.3 2.5E-12 8.6E-17 109.1 5.5 74 3-76 31-110 (117)
100 1uf1_A KIAA1526 protein; PDZ d 99.3 1.5E-11 5E-16 106.2 10.4 74 4-77 32-105 (128)
101 2edp_A Fragment, shroom family 99.3 2.7E-12 9.1E-17 106.2 5.4 72 4-76 21-94 (100)
102 3r68_A Na(+)/H(+) exchange reg 99.3 9.2E-12 3.1E-16 101.4 8.5 73 3-76 15-88 (95)
103 2vsp_A PDZ domain-containing p 99.3 3.6E-12 1.2E-16 103.4 6.0 73 3-76 13-86 (91)
104 2koj_A Partitioning defective 99.3 1.3E-11 4.5E-16 103.5 9.6 74 3-76 21-101 (111)
105 1x6d_A Interleukin-16; PDZ dom 99.3 5.7E-12 1.9E-16 107.3 7.3 74 3-76 26-103 (119)
106 1wg6_A Hypothetical protein (r 99.3 2.6E-12 9E-17 111.1 5.3 74 3-76 36-122 (127)
107 2eeh_A PDZ domain-containing p 99.3 2.2E-11 7.4E-16 100.5 10.6 84 108-192 12-95 (100)
108 2dlu_A INAD-like protein; PDZ 99.3 9.7E-12 3.3E-16 104.5 8.5 72 3-76 25-98 (111)
109 1x5n_A Harmonin; PDZ domain, u 99.3 7E-12 2.4E-16 105.9 7.5 73 3-75 26-98 (114)
110 1rgw_A ZAsp protein; PDZ, cyph 99.3 1.3E-11 4.4E-16 98.5 8.7 76 115-191 8-84 (85)
111 3khf_A Microtubule-associated 99.3 7.9E-12 2.7E-16 102.8 7.7 74 3-76 12-93 (99)
112 1q7x_A PDZ2B domain of PTP-BAS 99.3 5.4E-12 1.8E-16 105.5 6.7 74 3-76 19-102 (108)
113 1wi2_A Riken cDNA 2700099C19; 99.3 1.7E-11 5.9E-16 101.9 9.6 83 108-191 17-99 (104)
114 2iwn_A Multiple PDZ domain pro 99.3 2.1E-11 7.2E-16 99.3 9.9 74 3-76 14-93 (97)
115 1nf3_C PAR-6B; semi-CRIB motif 99.3 5.4E-12 1.9E-16 109.1 6.8 74 3-76 41-125 (128)
116 2g5m_B Neurabin-2; spinophilin 99.3 5.9E-12 2E-16 106.2 6.8 75 3-77 14-96 (113)
117 3ngh_A PDZ domain-containing p 99.3 8.9E-12 3.1E-16 103.7 7.8 73 3-76 12-85 (106)
118 2csj_A TJP2 protein; PDZ domai 99.3 5.5E-12 1.9E-16 107.2 6.6 73 3-76 25-104 (117)
119 3egg_C Spinophilin; PP1, serin 99.3 1.2E-11 4.2E-16 112.5 9.2 73 3-75 90-170 (170)
120 2dm8_A INAD-like protein; PDZ 99.3 5E-12 1.7E-16 107.0 6.1 74 3-76 27-103 (116)
121 3qe1_A Sorting nexin-27, G pro 99.3 1.6E-11 5.6E-16 102.3 9.2 74 3-76 16-102 (107)
122 1v5l_A PDZ and LIM domain 3; a 99.3 2.4E-12 8.2E-17 107.0 4.0 75 3-77 14-89 (103)
123 2q3g_A PDZ and LIM domain prot 99.3 1.4E-11 4.8E-16 99.3 8.3 77 115-192 10-87 (89)
124 1kwa_A Hcask/LIN-2 protein; PD 99.2 1.4E-11 4.9E-16 99.6 8.3 72 3-76 12-85 (88)
125 2dmz_A INAD-like protein; PDZ 99.2 1.1E-11 3.7E-16 107.0 8.0 75 3-77 26-107 (129)
126 2uzc_A Human pdlim5, PDZ and L 99.2 1.6E-11 5.6E-16 98.6 8.6 77 115-192 10-87 (88)
127 1uew_A Membrane associated gua 99.2 1.2E-11 4E-16 104.6 7.9 74 3-76 21-103 (114)
128 3b76_A E3 ubiquitin-protein li 99.2 3.1E-11 1E-15 103.3 10.6 83 108-191 26-113 (118)
129 3tsv_A Tight junction protein 99.2 2.6E-11 8.7E-16 104.6 10.1 72 3-76 38-112 (124)
130 2jxo_A Ezrin-radixin-moesin-bi 99.2 1.2E-11 4.2E-16 101.5 7.5 73 3-76 19-93 (98)
131 2qkv_A Inactivation-NO-after-p 99.2 2.2E-11 7.5E-16 99.9 8.9 71 3-76 19-91 (96)
132 1z87_A Alpha-1-syntrophin; pro 99.2 6.8E-12 2.3E-16 121.8 6.3 75 3-77 88-164 (263)
133 1qav_A Alpha-1 syntrophin (res 99.2 2.9E-11 1E-15 97.6 8.8 82 108-190 6-89 (90)
134 1vb7_A PDZ and LIM domain 2; P 99.2 1.8E-11 6.2E-16 99.8 7.4 83 109-192 7-90 (94)
135 1r6j_A Syntenin 1; PDZ, membra 99.2 4.1E-11 1.4E-15 96.3 9.3 74 108-189 6-80 (82)
136 2la8_A Inactivation-NO-after-p 99.2 1.8E-11 6.3E-16 102.6 7.6 71 3-76 13-85 (106)
137 1tp5_A Presynaptic density pro 99.2 3.1E-11 1E-15 102.6 9.0 73 3-76 24-98 (119)
138 2qg1_A Multiple PDZ domain pro 99.2 5.5E-11 1.9E-15 96.3 10.1 82 108-191 6-89 (92)
139 2d90_A PDZ domain containing p 99.2 1.4E-11 4.7E-16 102.0 6.5 73 3-76 16-89 (102)
140 2kom_A Partitioning defective 99.2 4E-11 1.4E-15 102.7 9.6 73 4-76 41-120 (121)
141 2ejy_A 55 kDa erythrocyte memb 99.2 2.5E-11 8.5E-16 100.5 8.0 70 3-74 23-94 (97)
142 2fcf_A Multiple PDZ domain pro 99.2 3.7E-11 1.3E-15 99.3 9.0 73 4-76 16-99 (103)
143 3kzd_A TIAM-1, T-lymphoma inva 99.2 5.1E-11 1.7E-15 98.2 9.7 70 4-74 20-90 (94)
144 2iwo_A Multiple PDZ domain pro 99.2 1.2E-11 4.2E-16 105.9 6.1 85 107-192 25-114 (120)
145 2eei_A PDZ domain-containing p 99.2 1.1E-11 3.8E-16 103.2 5.6 73 3-76 18-91 (106)
146 2pkt_A PDZ and LIM domain prot 99.2 3.4E-11 1.2E-15 97.4 8.3 77 115-192 10-87 (91)
147 1ihj_A INAD; intermolecular di 99.2 4E-11 1.4E-15 98.2 8.7 82 109-191 8-97 (98)
148 1x6d_A Interleukin-16; PDZ dom 99.2 5.8E-11 2E-15 101.0 10.0 88 108-196 17-108 (119)
149 2eeg_A PDZ and LIM domain prot 99.2 5.3E-11 1.8E-15 97.0 9.4 77 115-192 15-92 (94)
150 1va8_A Maguk P55 subfamily mem 99.2 4.3E-11 1.5E-15 101.2 9.1 70 4-76 37-108 (113)
151 2awx_A Synapse associated prot 99.2 7.7E-11 2.6E-15 98.0 10.5 84 109-194 6-96 (105)
152 2gzv_A PRKCA-binding protein; 99.2 4.3E-11 1.5E-15 101.6 9.1 73 3-75 35-109 (114)
153 3bpu_A Membrane-associated gua 99.2 4.8E-11 1.6E-15 96.0 8.9 71 3-76 13-86 (88)
154 1ueq_A Membrane associated gua 99.2 1.3E-10 4.5E-15 99.6 12.2 85 109-195 22-110 (123)
155 2q9v_A Membrane-associated gua 99.2 6.5E-11 2.2E-15 95.4 9.6 80 109-190 5-88 (90)
156 2v90_A PDZ domain-containing p 99.2 5.7E-11 2E-15 97.0 9.4 83 109-193 6-91 (96)
157 2byg_A Channel associated prot 99.2 6.8E-11 2.3E-15 100.8 10.1 82 109-192 27-115 (117)
158 2jik_A Synaptojanin-2 binding 99.2 8.7E-11 3E-15 96.8 10.4 83 108-192 9-98 (101)
159 2kv8_A RGS12, regulator of G-p 99.2 1E-11 3.4E-16 98.9 4.5 69 3-75 12-81 (83)
160 1n7e_A AMPA receptor interacti 99.2 1.1E-10 3.6E-15 95.7 10.8 77 116-193 14-92 (97)
161 2vsp_A PDZ domain-containing p 99.2 4.7E-11 1.6E-15 96.7 8.5 83 109-194 6-89 (91)
162 2vwr_A Ligand of NUMB protein 99.2 6.9E-11 2.4E-15 96.4 9.6 82 109-192 6-90 (95)
163 2ego_A General receptor for ph 99.2 7.5E-11 2.6E-15 96.5 9.7 82 108-190 6-95 (96)
164 1uep_A Membrane associated gua 99.2 4E-11 1.4E-15 99.5 8.1 83 108-192 11-97 (103)
165 3e17_A Tight junction protein 99.2 3.9E-11 1.3E-15 97.0 7.7 67 3-75 12-80 (88)
166 1uit_A Human discs large 5 pro 99.2 5.1E-11 1.8E-15 101.0 8.8 71 4-76 30-101 (117)
167 4e34_A Golgi-associated PDZ an 99.2 4E-11 1.4E-15 96.1 7.7 80 109-189 5-86 (87)
168 4amh_A Disks large homolog 1; 99.2 7.8E-11 2.7E-15 98.5 9.7 77 115-192 10-93 (106)
169 3cbz_A Dishevelled-2; PDZ doma 99.2 2.2E-11 7.5E-16 102.2 6.1 83 109-192 8-97 (108)
170 2iwq_A Multiple PDZ domain pro 99.2 5.2E-11 1.8E-15 102.5 8.6 74 3-76 35-119 (123)
171 1v5q_A GRIP1 homolog, glutamat 99.2 6.3E-11 2.2E-15 101.5 9.0 74 3-76 26-107 (122)
172 2dc2_A GOPC, golgi associated 99.2 4.9E-11 1.7E-15 99.2 8.0 84 108-192 11-96 (103)
173 2edz_A PDZ domain-containing p 99.2 2.7E-11 9.1E-16 102.4 6.4 73 3-76 24-97 (114)
174 2he4_A Na(+)/H(+) exchange reg 99.2 1.9E-10 6.5E-15 92.8 11.0 81 108-191 6-87 (90)
175 1m5z_A GRIP, AMPA receptor int 99.2 2.3E-10 8E-15 92.3 11.5 80 109-190 9-90 (91)
176 3hpk_A Protein interacting wit 99.2 1.2E-10 4E-15 100.1 10.2 81 109-190 22-104 (125)
177 2fe5_A Presynaptic protein SAP 99.2 1.7E-10 5.8E-15 93.6 10.7 81 109-191 6-93 (94)
178 2dkr_A LIN-7 homolog B; LIN-7B 99.2 8.8E-11 3E-15 95.1 9.0 82 108-191 7-90 (93)
179 2fne_A Multiple PDZ domain pro 99.2 3.6E-11 1.2E-15 102.5 6.9 84 108-193 27-115 (117)
180 1uhp_A Hypothetical protein KI 99.2 1.3E-10 4.4E-15 97.0 10.2 82 108-191 10-101 (107)
181 1g9o_A NHE-RF; PDZ domain, com 99.2 1.9E-10 6.6E-15 92.8 10.8 79 109-190 6-85 (91)
182 2e7k_A Maguk P55 subfamily mem 99.2 6.7E-11 2.3E-15 96.2 8.1 70 3-76 17-88 (91)
183 1kwa_A Hcask/LIN-2 protein; PD 99.2 9.9E-11 3.4E-15 94.6 9.0 81 109-192 4-86 (88)
184 1v62_A KIAA1719 protein; struc 99.2 1.4E-10 4.8E-15 98.7 10.4 85 107-192 16-103 (117)
185 2lob_A Golgi-associated PDZ an 98.8 3.1E-12 1E-16 108.5 0.0 71 3-73 38-110 (112)
186 2z17_A Pleckstrin homology SEC 99.2 4.5E-11 1.5E-15 99.3 7.0 70 3-72 26-103 (104)
187 2r4h_A Membrane-associated gua 99.2 1.4E-10 4.7E-15 97.9 10.0 83 108-192 26-110 (112)
188 2opg_A Multiple PDZ domain pro 99.2 2.2E-10 7.4E-15 93.8 10.9 82 109-192 7-91 (98)
189 1ujd_A KIAA0559 protein; PDZ d 99.2 9.5E-11 3.3E-15 99.6 9.0 75 117-192 29-110 (117)
190 2i1n_A Discs, large homolog 3; 99.2 1.3E-10 4.3E-15 96.0 9.5 82 109-192 7-95 (102)
191 2eaq_A LIM domain only protein 99.1 1.2E-10 4E-15 93.9 9.0 70 4-76 17-89 (90)
192 1qau_A Neuronal nitric oxide s 99.1 2.1E-10 7.1E-15 96.3 10.9 73 3-76 12-87 (112)
193 2cs5_A Tyrosine-protein phosph 99.1 4E-11 1.4E-15 102.0 6.5 85 108-193 17-108 (119)
194 1d5g_A Human phosphatase HPTP1 99.1 2.4E-10 8.1E-15 93.2 10.9 82 109-192 8-94 (96)
195 3nfk_A Tyrosine-protein phosph 99.1 6.6E-11 2.3E-15 98.6 7.7 82 108-190 19-107 (107)
196 2vsv_A Rhophilin-2; scaffold p 99.1 1.1E-10 3.8E-15 98.6 9.0 70 3-76 33-104 (109)
197 1y7n_A Amyloid beta A4 precurs 99.1 9E-11 3.1E-15 95.6 8.1 65 3-74 23-88 (90)
198 3soe_A Membrane-associated gua 99.1 1.2E-10 4.2E-15 99.1 9.1 69 3-76 22-93 (113)
199 1uf1_A KIAA1526 protein; PDZ d 99.1 5.5E-10 1.9E-14 96.2 13.4 76 118-194 32-107 (128)
200 1uju_A Scribble; PDZ domain, c 99.1 6.3E-11 2.1E-15 99.6 7.2 84 107-191 10-104 (111)
201 1wha_A KIAA0147 protein, scrib 99.1 2E-10 6.8E-15 95.5 10.2 82 109-192 10-99 (105)
202 1wf7_A Enigma homologue protei 99.1 7.4E-11 2.5E-15 97.8 7.5 78 116-194 13-91 (103)
203 2i04_A Membrane-associated gua 99.1 2.5E-10 8.4E-15 91.0 10.3 77 111-189 5-85 (85)
204 2yt7_A Amyloid beta A4 precurs 99.1 1.3E-10 4.6E-15 96.1 9.0 74 3-76 20-99 (101)
205 2w4f_A Protein LAP4; structura 99.1 2.3E-10 7.8E-15 93.4 10.3 80 111-192 8-94 (97)
206 2o2t_A Multiple PDZ domain pro 99.1 5.3E-11 1.8E-15 100.9 6.6 86 108-193 22-112 (117)
207 3l4f_D SH3 and multiple ankyri 99.1 1.4E-10 4.8E-15 101.0 9.5 84 107-191 28-124 (132)
208 2ehr_A INAD-like protein; PDZ 99.1 1.5E-10 5E-15 98.2 9.4 84 108-192 17-111 (117)
209 1i16_A Interleukin 16, LCF; cy 99.1 7.1E-11 2.4E-15 102.4 7.4 83 107-191 30-118 (130)
210 2d92_A INAD-like protein; PDZ 99.1 9.1E-11 3.1E-15 98.3 7.8 82 108-191 17-105 (108)
211 1mfg_A ERB-B2 interacting prot 99.1 1.8E-10 6.1E-15 93.9 9.3 73 117-191 12-93 (95)
212 3axa_A Afadin, nectin-3, prote 99.1 1.7E-10 5.9E-15 96.0 9.4 77 115-192 18-99 (106)
213 1uez_A KIAA1526 protein; PDZ d 99.1 9.9E-11 3.4E-15 96.6 7.8 76 116-192 19-94 (101)
214 2eno_A Synaptojanin-2-binding 99.1 1.4E-10 4.7E-15 98.9 8.9 83 108-192 19-108 (120)
215 2djt_A Unnamed protein product 99.1 1.4E-10 4.7E-15 96.1 8.7 84 107-192 12-99 (104)
216 1uew_A Membrane associated gua 99.1 1.8E-10 6E-15 97.3 9.5 86 107-193 11-105 (114)
217 1whd_A RGS3, regulator of G-pr 99.1 3.1E-11 1.1E-15 99.8 4.5 69 4-76 26-95 (100)
218 2edp_A Fragment, shroom family 99.1 6.4E-11 2.2E-15 97.9 6.4 82 109-192 12-95 (100)
219 1um7_A Synapse-associated prot 99.1 3.5E-11 1.2E-15 101.0 4.9 73 3-76 25-99 (113)
220 1v5l_A PDZ and LIM domain 3; a 99.1 4.2E-11 1.4E-15 99.4 5.2 83 114-197 11-94 (103)
221 1x5q_A LAP4 protein; PDZ domai 99.1 5.1E-10 1.7E-14 93.7 11.8 82 109-192 18-106 (110)
222 1um1_A KIAA1849 protein, RSGI 99.1 3.8E-10 1.3E-14 94.5 11.1 87 108-196 10-101 (110)
223 2kjd_A Sodium/hydrogen exchang 99.1 1.3E-10 4.4E-15 99.9 8.3 73 3-76 19-93 (128)
224 1wfg_A Regulating synaptic mem 99.1 8.4E-11 2.9E-15 102.2 7.1 79 112-191 42-127 (131)
225 2dls_A PDZ-rhogef, RHO guanine 99.1 2.7E-10 9.4E-15 92.7 9.8 77 109-191 11-87 (93)
226 2jil_A GRIP1 protein, glutamat 99.1 1.6E-10 5.4E-15 94.5 8.2 81 110-192 7-93 (97)
227 2db5_A INAD-like protein; PDZ 99.1 1.2E-10 4.1E-15 100.4 7.7 83 109-191 28-115 (128)
228 2csj_A TJP2 protein; PDZ domai 99.1 1.5E-10 5.1E-15 98.3 8.1 84 108-193 16-106 (117)
229 2h2b_A Tight junction protein 99.1 3.2E-10 1.1E-14 94.4 10.0 84 108-193 9-99 (107)
230 2d8i_A T-cell lymphoma invasio 99.1 6.8E-11 2.3E-15 100.7 5.9 71 5-76 30-101 (114)
231 3ngh_A PDZ domain-containing p 99.1 1.7E-10 6E-15 95.8 8.2 85 109-195 4-89 (106)
232 2yuy_A RHO GTPase activating p 99.1 2.2E-11 7.4E-16 105.0 2.6 59 18-76 61-120 (126)
233 3k1r_A Harmonin; protein-prote 99.1 1.8E-10 6.1E-15 106.3 8.9 86 107-193 85-170 (192)
234 1fc6_A Photosystem II D1 prote 99.1 6.5E-10 2.2E-14 113.3 13.8 172 118-291 85-325 (388)
235 2jre_A C60-1 PDZ domain peptid 99.1 3.4E-10 1.2E-14 94.4 9.5 83 109-192 15-105 (108)
236 2qkv_A Inactivation-NO-after-p 99.1 4.3E-10 1.5E-14 92.1 10.0 81 107-191 9-91 (96)
237 1wfv_A Membrane associated gua 99.1 7.3E-11 2.5E-15 97.4 5.3 83 109-193 14-98 (103)
238 2rcz_A Tight junction protein 99.1 3E-10 1E-14 89.1 8.7 67 3-75 12-80 (81)
239 2f5y_A Regulator of G-protein 99.1 5.4E-10 1.9E-14 90.4 10.4 78 109-192 6-84 (91)
240 2edv_A FERM and PDZ domain-con 99.1 3.6E-11 1.2E-15 98.7 3.3 68 4-76 21-89 (96)
241 2fcf_A Multiple PDZ domain pro 99.1 5.7E-10 1.9E-14 92.1 10.5 83 109-192 7-100 (103)
242 1q3o_A Shank1; PDZ, GKAP, pept 99.1 5.3E-10 1.8E-14 93.6 10.4 82 109-191 10-104 (109)
243 3o46_A Maguk P55 subfamily mem 99.1 4.3E-10 1.5E-14 91.3 9.6 80 109-191 7-88 (93)
244 1wi4_A Synip, syntaxin binding 99.1 4.8E-10 1.6E-14 94.3 10.1 82 108-192 17-106 (109)
245 2la8_A Inactivation-NO-after-p 99.1 8.2E-10 2.8E-14 92.5 11.5 79 109-191 5-85 (106)
246 1x5n_A Harmonin; PDZ domain, u 99.1 2.2E-10 7.6E-15 96.6 7.9 87 107-194 16-103 (114)
247 3cyy_A Tight junction protein 99.1 4.3E-10 1.5E-14 90.8 9.3 67 4-76 15-83 (92)
248 2kpk_A Membrane-associated gua 99.1 4.8E-10 1.6E-14 97.0 10.0 82 109-192 21-106 (129)
249 1ujv_A Membrane associated gua 99.1 3.2E-10 1.1E-14 93.1 8.4 69 3-76 20-91 (96)
250 2kv8_A RGS12, regulator of G-p 99.1 1.9E-10 6.7E-15 91.3 6.9 77 109-191 5-82 (83)
251 2gzv_A PRKCA-binding protein; 99.1 6E-10 2.1E-14 94.5 10.3 84 107-191 25-110 (114)
252 2ejy_A 55 kDa erythrocyte memb 99.1 3.1E-10 1.1E-14 93.9 8.2 79 109-190 15-95 (97)
253 1wif_A RSGI RUH-020, riken cDN 99.1 1E-10 3.4E-15 101.5 5.4 70 3-75 37-110 (126)
254 3gsl_A Disks large homolog 4; 99.1 4.7E-10 1.6E-14 102.1 10.1 73 4-76 111-190 (196)
255 2d90_A PDZ domain containing p 99.1 3E-10 1E-14 93.8 8.0 83 108-193 8-91 (102)
256 1v5q_A GRIP1 homolog, glutamat 99.1 8E-10 2.7E-14 94.5 10.9 89 108-197 17-113 (122)
257 3sfj_A TAX1-binding protein 3; 99.1 6.4E-10 2.2E-14 91.9 9.8 72 118-190 19-104 (104)
258 1va8_A Maguk P55 subfamily mem 99.1 5.5E-10 1.9E-14 94.3 9.4 81 108-192 27-109 (113)
259 1n7t_A 99-MER peptide of densi 99.1 3.4E-10 1.2E-14 93.7 8.0 73 117-191 20-101 (103)
260 3i4w_A Disks large homolog 4; 99.1 9.1E-10 3.1E-14 90.9 10.6 81 108-191 13-95 (104)
261 1wg6_A Hypothetical protein (r 99.1 9.3E-11 3.2E-15 101.3 4.6 81 111-192 30-123 (127)
262 3tsz_A Tight junction protein 99.1 3.7E-10 1.3E-14 115.5 9.8 73 3-77 18-93 (391)
263 2daz_A INAD-like protein; PDZ 99.0 5.1E-10 1.7E-14 96.0 9.2 83 109-193 28-113 (124)
264 3qe1_A Sorting nexin-27, G pro 99.0 7.6E-10 2.6E-14 92.1 10.0 82 109-192 9-103 (107)
265 2dmz_A INAD-like protein; PDZ 99.0 3.9E-10 1.3E-14 97.2 8.5 85 108-193 17-108 (129)
266 3egg_C Spinophilin; PP1, serin 99.0 6.2E-10 2.1E-14 101.2 10.1 81 108-190 82-170 (170)
267 1q7x_A PDZ2B domain of PTP-BAS 99.0 4.3E-10 1.5E-14 93.9 8.1 83 108-192 11-103 (108)
268 3r68_A Na(+)/H(+) exchange reg 99.0 1E-09 3.5E-14 89.1 9.9 81 110-193 9-90 (95)
269 1ufx_A KIAA1526 protein; PDZ d 99.0 4.2E-10 1.4E-14 93.8 7.5 81 109-191 9-97 (103)
270 1wf8_A Neurabin-I; PDZ domain, 99.0 5.3E-10 1.8E-14 93.2 8.2 81 109-191 12-100 (107)
271 2eaq_A LIM domain only protein 99.0 5.7E-10 1.9E-14 89.9 8.0 70 118-191 17-89 (90)
272 2koj_A Partitioning defective 99.0 1.3E-09 4.6E-14 91.2 10.5 75 117-192 21-102 (111)
273 2dm8_A INAD-like protein; PDZ 99.0 6.7E-10 2.3E-14 93.8 8.7 82 109-192 20-104 (116)
274 2eei_A PDZ domain-containing p 99.0 5.4E-10 1.9E-14 92.8 7.9 85 108-195 10-95 (106)
275 1nf3_C PAR-6B; semi-CRIB motif 99.0 3.1E-10 1.1E-14 98.0 6.5 84 108-192 31-126 (128)
276 2edz_A PDZ domain-containing p 99.0 4.2E-10 1.5E-14 95.0 7.1 85 108-194 15-100 (114)
277 2g5m_B Neurabin-2; spinophilin 99.0 5.2E-10 1.8E-14 94.1 7.5 76 117-193 14-97 (113)
278 1wh1_A KIAA1095 protein; PDZ d 99.0 7.3E-10 2.5E-14 95.1 8.5 71 4-76 32-107 (124)
279 2iwq_A Multiple PDZ domain pro 99.0 1.1E-09 3.7E-14 94.2 9.2 83 108-191 26-119 (123)
280 2dlu_A INAD-like protein; PDZ 99.0 1.3E-09 4.6E-14 91.3 9.6 81 108-192 17-99 (111)
281 3gge_A PDZ domain-containing p 99.0 1.4E-09 4.7E-14 89.7 9.4 79 108-190 7-89 (95)
282 2iwn_A Multiple PDZ domain pro 99.0 1.9E-09 6.5E-14 87.5 10.0 76 116-192 13-94 (97)
283 2vz5_A TAX1-binding protein 3; 99.0 1.7E-09 5.7E-14 95.0 10.3 79 118-197 38-130 (139)
284 1z87_A Alpha-1-syntrophin; pro 99.0 8.1E-10 2.8E-14 107.2 9.1 87 107-194 78-166 (263)
285 3bpu_A Membrane-associated gua 99.0 1.6E-09 5.4E-14 86.9 9.3 78 110-192 7-87 (88)
286 3e17_A Tight junction protein 99.0 8.3E-10 2.8E-14 89.1 7.6 69 116-191 11-81 (88)
287 3shw_A Tight junction protein 99.0 8.9E-10 3E-14 114.9 9.7 72 3-76 10-84 (468)
288 3r0h_A INAD, inactivation-NO-a 99.0 1E-09 3.6E-14 101.3 9.1 70 4-76 125-196 (206)
289 3qik_A Phosphatidylinositol 3, 99.0 8.8E-10 3E-14 91.8 7.6 68 3-73 27-98 (101)
290 1qau_A Neuronal nitric oxide s 99.0 1.7E-09 5.9E-14 90.6 9.5 85 109-195 4-91 (112)
291 1b8q_A Protein (neuronal nitri 99.0 3E-10 1E-14 97.7 4.9 72 4-76 20-94 (127)
292 1v6b_A Harmonin isoform A1; st 99.0 1.1E-09 3.9E-14 93.2 8.5 73 118-191 28-107 (118)
293 2yub_A LIMK-2, LIM domain kina 99.0 1E-09 3.5E-14 93.8 8.0 74 4-77 27-106 (118)
294 2kom_A Partitioning defective 99.0 4E-09 1.4E-13 90.2 11.6 75 116-191 39-120 (121)
295 1vae_A Rhophilin 2, rhophilin, 99.0 2.8E-10 9.7E-15 96.2 4.2 70 3-76 25-96 (111)
296 2yt7_A Amyloid beta A4 precurs 99.0 2.9E-09 1E-13 87.9 10.0 82 108-190 11-98 (101)
297 1uit_A Human discs large 5 pro 99.0 3.2E-09 1.1E-13 89.9 10.4 81 109-193 22-103 (117)
298 2jxo_A Ezrin-radixin-moesin-bi 99.0 1.3E-09 4.4E-14 89.2 7.6 80 110-192 13-94 (98)
299 3khf_A Microtubule-associated 98.9 1.3E-09 4.4E-14 89.4 7.1 76 116-192 11-94 (99)
300 2z17_A Pleckstrin homology SEC 98.9 1.7E-09 5.9E-14 89.6 7.9 79 108-187 17-103 (104)
301 2e7k_A Maguk P55 subfamily mem 98.9 2.6E-09 8.9E-14 86.7 8.8 77 109-190 9-87 (91)
302 1whd_A RGS3, regulator of G-pr 98.9 1.9E-09 6.7E-14 88.8 7.7 77 109-191 18-95 (100)
303 2d8i_A T-cell lymphoma invasio 98.9 1.7E-09 5.9E-14 91.9 7.5 81 109-191 18-101 (114)
304 2edv_A FERM and PDZ domain-con 98.9 1E-09 3.5E-14 90.0 5.7 77 109-191 11-89 (96)
305 2qbw_A PDZ-fibronectin fusion 98.9 3.3E-09 1.1E-13 97.2 9.8 74 118-193 2-87 (195)
306 2rcz_A Tight junction protein 98.9 3.7E-09 1.3E-13 82.8 8.7 70 115-191 10-81 (81)
307 2vsv_A Rhophilin-2; scaffold p 98.9 3.2E-09 1.1E-13 89.6 8.9 78 109-192 26-105 (109)
308 3kzd_A TIAM-1, T-lymphoma inva 98.9 5.7E-09 1.9E-13 85.9 10.0 70 118-189 20-90 (94)
309 1tp5_A Presynaptic density pro 98.9 4.5E-09 1.5E-13 89.1 9.7 82 108-192 16-99 (119)
310 3tsv_A Tight junction protein 98.9 5.5E-09 1.9E-13 89.9 10.2 75 115-192 36-113 (124)
311 2qt5_A Glutamate receptor-inte 98.9 5.2E-09 1.8E-13 96.4 10.6 83 108-191 9-93 (200)
312 3cyy_A Tight junction protein 98.9 3.8E-09 1.3E-13 85.1 8.4 71 117-194 14-86 (92)
313 2lob_A Golgi-associated PDZ an 98.4 1.7E-10 5.7E-15 97.8 0.0 79 109-188 30-110 (112)
314 3soe_A Membrane-associated gua 98.9 4.5E-09 1.5E-13 89.4 8.8 78 108-192 14-94 (113)
315 2yuy_A RHO GTPase activating p 98.9 1.3E-09 4.3E-14 93.8 5.4 60 132-192 61-121 (126)
316 1um7_A Synapse-associated prot 98.9 5E-09 1.7E-13 87.7 8.8 83 107-192 16-100 (113)
317 1y7n_A Amyloid beta A4 precurs 98.9 9.2E-09 3.1E-13 83.6 9.7 68 115-190 21-89 (90)
318 1b8q_A Protein (neuronal nitri 98.9 3.7E-09 1.3E-13 90.8 7.4 89 108-198 10-101 (127)
319 2krg_A Na(+)/H(+) exchange reg 98.9 9.7E-10 3.3E-14 103.7 4.1 73 3-76 19-93 (216)
320 2i6v_A General secretion pathw 98.9 6.9E-09 2.4E-13 83.4 8.4 72 5-76 6-78 (87)
321 1wh1_A KIAA1095 protein; PDZ d 98.9 1.1E-08 3.7E-13 87.7 10.0 74 117-193 31-109 (124)
322 2l97_A HTRA, putative serine p 98.8 1.3E-08 4.3E-13 88.7 10.0 57 17-76 56-115 (134)
323 2kjd_A Sodium/hydrogen exchang 98.8 7.5E-09 2.6E-13 88.8 8.3 84 109-195 12-97 (128)
324 1ujv_A Membrane associated gua 98.8 1.2E-08 4.1E-13 83.7 8.8 78 108-192 12-92 (96)
325 1p1d_A PDZ45, glutamate recept 98.8 1.8E-08 6E-13 92.7 9.9 84 109-193 9-100 (196)
326 2i6v_A General secretion pathw 98.8 1.3E-08 4.5E-13 81.7 8.0 65 132-196 19-83 (87)
327 3i18_A LMO2051 protein; alpha- 98.8 2.6E-08 9E-13 82.1 9.6 57 17-76 6-65 (100)
328 2pzd_A Serine protease HTRA2; 98.8 1.5E-08 5E-13 85.1 8.1 58 17-76 34-91 (113)
329 1wif_A RSGI RUH-020, riken cDN 98.8 8.1E-09 2.8E-13 89.4 6.3 76 110-190 31-110 (126)
330 3i18_A LMO2051 protein; alpha- 98.7 4E-08 1.4E-12 81.0 9.7 66 131-197 6-71 (100)
331 2p3w_A Probable serine proteas 98.7 2.1E-08 7.1E-13 84.2 7.9 58 17-76 34-91 (112)
332 2i4s_A General secretion pathw 98.7 3.8E-08 1.3E-12 81.9 9.3 72 5-76 24-96 (105)
333 2yub_A LIMK-2, LIM domain kina 98.7 1.7E-08 5.9E-13 86.1 7.3 76 118-194 27-108 (118)
334 2kjp_A Uncharacterized protein 98.7 4.4E-09 1.5E-13 85.7 3.4 56 18-76 1-59 (91)
335 2l97_A HTRA, putative serine p 98.7 7.3E-08 2.5E-12 83.9 11.4 66 131-197 56-121 (134)
336 1vae_A Rhophilin 2, rhophilin, 98.7 9.7E-09 3.3E-13 86.7 5.5 75 110-190 19-95 (111)
337 2kl1_A YLBL protein; structure 98.7 1.1E-08 3.8E-13 83.6 5.6 59 15-76 2-63 (94)
338 3stj_A Protease DEGQ; serine p 98.7 3.8E-08 1.3E-12 98.8 10.2 71 4-76 240-322 (345)
339 3qik_A Phosphatidylinositol 3, 98.7 2.9E-08 9.8E-13 82.6 7.2 70 116-189 26-99 (101)
340 3tsz_A Tight junction protein 98.7 3E-08 1E-12 101.3 9.0 73 118-193 19-94 (391)
341 2pzd_A Serine protease HTRA2; 98.7 6.7E-08 2.3E-12 81.1 9.2 65 131-198 34-98 (113)
342 2i4s_A General secretion pathw 98.7 6.5E-08 2.2E-12 80.5 9.0 64 133-196 38-101 (105)
343 2kl1_A YLBL protein; structure 98.7 3.7E-08 1.3E-12 80.4 7.1 67 131-198 4-70 (94)
344 1w9e_A Syntenin 1; cell adhesi 98.7 1E-07 3.5E-12 85.4 10.3 82 108-193 6-89 (166)
345 1te0_A Protease DEGS; two doma 98.7 6.9E-08 2.4E-12 95.6 10.1 71 4-76 221-303 (318)
346 3k50_A Putative S41 protease; 98.6 3.7E-08 1.3E-12 101.0 7.9 57 133-193 91-148 (403)
347 3shw_A Tight junction protein 98.6 4.6E-08 1.6E-12 102.0 8.1 72 118-192 11-85 (468)
348 2p3w_A Probable serine proteas 98.6 1.2E-07 4.1E-12 79.4 9.1 65 131-198 34-98 (112)
349 1y8t_A Hypothetical protein RV 98.6 1.3E-07 4.4E-12 93.7 10.3 70 4-76 229-302 (324)
350 3id1_A Regulator of sigma E pr 98.6 1.1E-07 3.8E-12 77.8 8.2 58 135-192 5-62 (95)
351 3id1_A Regulator of sigma E pr 98.6 8.5E-08 2.9E-12 78.5 7.2 55 20-76 4-61 (95)
352 2kjp_A Uncharacterized protein 98.6 1.3E-08 4.6E-13 82.8 2.3 60 133-196 2-64 (91)
353 2zpm_A Regulator of sigma E pr 98.6 9.8E-08 3.4E-12 76.7 7.2 56 19-76 5-62 (91)
354 1fc6_A Photosystem II D1 prote 98.6 1.7E-07 5.9E-12 95.3 10.8 73 4-76 85-159 (388)
355 2krg_A Na(+)/H(+) exchange reg 98.6 3E-08 1E-12 93.5 4.6 84 108-194 11-96 (216)
356 4fgm_A Aminopeptidase N family 98.5 1.9E-07 6.5E-12 100.3 9.8 69 5-76 486-554 (597)
357 2zpm_A Regulator of sigma E pr 98.5 2.5E-07 8.4E-12 74.4 7.7 65 133-198 5-69 (91)
358 3qo6_A Protease DO-like 1, chl 98.5 2.5E-07 8.7E-12 92.7 8.6 70 5-76 234-321 (348)
359 3stj_A Protease DEGQ; serine p 98.5 5E-07 1.7E-11 90.7 10.0 67 131-197 262-328 (345)
360 1lcy_A HTRA2 serine protease; 98.4 4.4E-07 1.5E-11 90.2 9.5 58 17-76 255-312 (325)
361 3rle_A Golgi reassembly-stacki 98.4 5.2E-07 1.8E-11 84.1 8.2 64 129-192 13-77 (209)
362 3suz_A Amyloid beta A4 precurs 98.4 2.3E-07 8E-12 94.6 6.3 84 108-192 206-295 (388)
363 3k50_A Putative S41 protease; 98.4 3.7E-07 1.3E-11 93.6 7.7 71 3-76 73-146 (403)
364 1te0_A Protease DEGS; two doma 98.3 8.7E-07 3E-11 87.6 8.8 67 131-197 243-309 (318)
365 1y8t_A Hypothetical protein RV 98.3 1.3E-06 4.3E-11 86.5 9.9 78 118-196 229-307 (324)
366 1lcy_A HTRA2 serine protease; 98.3 1.4E-06 4.9E-11 86.4 10.2 65 131-198 255-319 (325)
367 2hga_A Conserved protein MTH13 98.3 8.3E-07 2.8E-11 76.5 7.4 60 131-192 24-83 (125)
368 2hga_A Conserved protein MTH13 98.3 6.3E-07 2.2E-11 77.2 6.6 56 17-76 24-82 (125)
369 4fgm_A Aminopeptidase N family 98.3 1.1E-06 3.9E-11 94.3 9.0 78 117-198 484-561 (597)
370 3pv2_A DEGQ; trypsin fold, PDZ 98.3 3E-06 1E-10 88.0 10.6 66 132-197 282-347 (451)
371 4a8c_A Periplasmic PH-dependen 98.3 2.9E-06 1E-10 87.6 10.4 67 131-197 262-328 (436)
372 1k32_A Tricorn protease; prote 98.2 1.2E-06 4E-11 98.9 7.6 153 119-291 738-967 (1045)
373 3num_A Serine protease HTRA1; 98.2 2.7E-07 9.1E-12 91.9 0.0 58 17-76 253-310 (332)
374 3qo6_A Protease DO-like 1, chl 98.1 2.3E-06 8E-11 85.7 6.8 66 132-197 251-327 (348)
375 3num_A Serine protease HTRA1; 97.9 1.2E-06 4.1E-11 87.2 0.0 63 131-196 253-315 (332)
376 1ky9_A Protease DO, DEGP, HTRA 97.8 6.5E-06 2.2E-10 85.4 2.4 67 131-197 285-351 (448)
377 4fln_A Protease DO-like 2, chl 97.7 0.00016 5.4E-09 76.7 11.4 67 131-198 276-352 (539)
378 1k32_A Tricorn protease; prote 97.6 6.6E-05 2.3E-09 84.5 7.6 67 4-76 737-815 (1045)
379 1j7x_A IRBP, interphotorecepto 71.0 1.9 6.4E-05 41.7 2.5 40 252-291 204-244 (302)
380 3m1f_V VOPL, putative uncharac 61.4 3.5 0.00012 25.9 1.4 14 302-315 3-16 (31)
381 3dor_A Protein CT_858, CPAF; m 55.7 4.9 0.00017 42.6 2.3 38 253-290 457-495 (583)
382 3dor_A Protein CT_858, CPAF; m 40.7 26 0.00088 37.1 4.9 43 5-53 85-127 (583)
383 4gdk_C APG16-like 1, autophagy 28.8 15 0.00052 24.3 0.5 31 290-320 6-36 (36)
384 1j98_A Autoinducer-2 productio 23.1 26 0.0009 30.8 1.1 23 358-380 1-23 (157)
385 1j6x_A Autoinducer-2 productio 21.7 29 0.001 30.5 1.2 22 358-380 3-24 (160)
386 2guz_B Mitochondrial import in 20.1 26 0.00088 26.1 0.4 15 309-323 21-35 (65)
No 1
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.92 E-value=3.4e-24 Score=196.63 Aligned_cols=164 Identities=29% Similarity=0.443 Sum_probs=133.1
Q ss_pred CCeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
+++|||+|.+|.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..++|+|.|.
T Consensus 15 ~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~ 94 (196)
T 3gsl_A 15 NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRR 94 (196)
T ss_dssp TTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEE
T ss_pred CCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 56899999998875 5699999999999999999 99999999999999999999888877765 78999999987
Q ss_pred CcccCccccceeeeEeecCCCccCCCCCCCCccceEEeeCCCCCCCceeecCCC-----CCCceEEEEECCCChhhhcC-
Q psy12296 76 GMIPTKERDKSVTWKFVDTNKSNLNQNERFPVVPITLEVPPHGKLGCGICKGPQ-----WKPGIFVQFTKDACVAKDAG- 149 (433)
Q Consensus 76 g~~~~~~~~~~~sv~l~~~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~gg~~-----~~~GV~V~~V~~gspA~~aG- 149 (433)
+.. ......+.+ ... ...||+.+.++.. ...|++|..|.++++|+++|
T Consensus 95 ~~~----~~~~~~v~l---------------------~~~-~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~ 148 (196)
T 3gsl_A 95 KPP----AEKVMEIKL---------------------IKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGR 148 (196)
T ss_dssp CCC----CEEEEEEEE---------------------EEB-TTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCC
T ss_pred CCC----ccccEEEEE---------------------ecC-CCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCC
Confidence 621 111222222 222 2357777765432 13589999999999999999
Q ss_pred CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCee
Q psy12296 150 LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVGL 193 (433)
Q Consensus 150 L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~~ 193 (433)
|++||+|++|||+++. ..++.+++..++.. +.+.|+|.|++..
T Consensus 149 L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 192 (196)
T 3gsl_A 149 LQIGDKILAVNSVGLE-DVMHEDAVAALKNTYDVVYLKVAKPSNA 192 (196)
T ss_dssp CCTTCEEEEETTEECS-SCBHHHHHHHHHSCCEEEEEEEEEESCC
T ss_pred CCCCCEEEEECCCcCC-CCCHHHHHHHHHcCCCeEEEEEeCCCCc
Confidence 9999999999999999 67799999999876 7899999998754
No 2
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.91 E-value=2.1e-23 Score=193.91 Aligned_cols=160 Identities=23% Similarity=0.300 Sum_probs=131.2
Q ss_pred CCeEeEEEEecCCCC--CCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCC--CCHHHHHHHhcC-CcE-EEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHT--TGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIED--ATHSEVLQLIHS-QNI-ISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~--~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~--~s~~eav~lL~~-g~~-V~L~V~R~ 75 (433)
+++|||+|.+|.+.. .|++|..|.++|+|+++| |++||+|++|||+++.+ +++.+++.+++. +.. |.|+|.|.
T Consensus 28 ~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~ 107 (206)
T 3r0h_A 28 KKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRA 107 (206)
T ss_dssp TSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECC
T ss_pred CCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEec
Confidence 579999999988764 489999999999999999 99999999999999999 888888888875 555 99999987
Q ss_pred CcccCccccceeeeEeecCCCccCCCCCCCCccceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCC
Q psy12296 76 GMIPTKERDKSVTWKFVDTNKSNLNQNERFPVVPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGD 154 (433)
Q Consensus 76 g~~~~~~~~~~~sv~l~~~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD 154 (433)
+.. ....+.+. +.......|||.+..+ ..|++|..|.++|+|+++| |++||
T Consensus 108 ~~~----~~~~~~v~---------------------l~~~~~~~lG~~~~~~---~~gv~V~~V~~gs~A~~aG~L~~GD 159 (206)
T 3r0h_A 108 DPP----ELEKFNVD---------------------LMKKAGKELGLSLSPN---EIGCTIADLIQGQYPEIDSKLQRGD 159 (206)
T ss_dssp SSC----CEEEEEEE---------------------EECCTTCCCCEEEEEC---SSCEEEEEECTTSCHHHHHHCCTTC
T ss_pred ccC----CCcEEEEE---------------------EecCCCCccCeEEEcC---CceEEEEEECCCChHHHcCCCCCCC
Confidence 621 11122222 2223345688888642 3689999999999999999 99999
Q ss_pred EEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECC
Q psy12296 155 QILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGV 191 (433)
Q Consensus 155 ~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~ 191 (433)
+|++|||+++. ..++.+++..++.. +.+.|+|.|..
T Consensus 160 ~Il~VNg~~v~-~~~~~~~~~~l~~~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 160 IITKFNGDALE-GLPFQVCYALFKGANGKVSMEVTRPK 196 (206)
T ss_dssp EEEEETTEECT-TCCHHHHHHHHHTCCSEEEEEEEEEC
T ss_pred EEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 99999999999 67889999988775 78999999864
No 3
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.90 E-value=1.1e-22 Score=188.79 Aligned_cols=171 Identities=26% Similarity=0.376 Sum_probs=133.8
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhC-CCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcCcccC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERS-GLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVGMIPT 80 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~a-GL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g~~~~ 80 (433)
+++|||+|.+|.+...|++|..|.++|||+++ ||++||+|++|||+++.++++.++..+++. ++.|.|+|.|++....
T Consensus 18 ~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~ 97 (200)
T 2qt5_A 18 GTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYELPPVS 97 (200)
T ss_dssp TCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEECCCCC
T ss_pred CCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEeccCCCcc
Confidence 57999999999888889999999999999999 899999999999999999999998888864 7899999998752100
Q ss_pred ccccceeeeEeecCCCccCCCCCCCCccceEEeeCCCCCCCceeecCCCC----CCceEEEEECCCChhhhcC-CCCCCE
Q psy12296 81 KERDKSVTWKFVDTNKSNLNQNERFPVVPITLEVPPHGKLGCGICKGPQW----KPGIFVQFTKDACVAKDAG-LKCGDQ 155 (433)
Q Consensus 81 ~~~~~~~sv~l~~~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~gg~~~----~~GV~V~~V~~gspA~~aG-L~~GD~ 155 (433)
... .... .....+.+.. ....||+.+.++... ..|++|..|.++++|+++| |++||+
T Consensus 98 ~~g-~~~~----------------~~~~~v~l~~-~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~ 159 (200)
T 2qt5_A 98 IQG-SSVM----------------FRTVEVTLHK-EGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDR 159 (200)
T ss_dssp CCC-SSEE----------------EEEEEEEEEC-BTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCE
T ss_pred cCC-Cccc----------------eeEEEEEEec-CCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCE
Confidence 000 0000 0011122222 335688887654321 3589999999999999999 999999
Q ss_pred EEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCe
Q psy12296 156 ILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVG 192 (433)
Q Consensus 156 Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~ 192 (433)
|++|||+++. ..++.++++.++.. +.+.|+|.|++.
T Consensus 160 I~~ing~~v~-~~~~~~~~~~l~~~~~~v~l~v~R~~~ 196 (200)
T 2qt5_A 160 LLSVDGIRLL-GTTHAEAMSILKQCGQEATLLIEYDVS 196 (200)
T ss_dssp EEEETTEECT-TCCHHHHHHHHHTTCSEEEEEEEEEEE
T ss_pred EEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 9999999999 77888888888764 799999999864
No 4
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.88 E-value=1.8e-21 Score=180.30 Aligned_cols=167 Identities=25% Similarity=0.395 Sum_probs=129.8
Q ss_pred CCeEeEEEEecCCC----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREH----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R 74 (433)
.++|||+|.+|.+. ..+++|..|.++|||+++| |++||+|++|||+++.+.++.++..+++. +..|+|+|.|
T Consensus 17 ~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 96 (196)
T 1p1d_A 17 VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEF 96 (196)
T ss_dssp TTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEE
T ss_pred CCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEe
Confidence 47999999998543 3589999999999999999 99999999999999998877888888874 6789999999
Q ss_pred cCcccCccccceeeeEeecCCCccCCCCCCCCccceEEeeCCCCCCCceeecCCCC--CCceEEEEECCCChhhhcC-CC
Q psy12296 75 VGMIPTKERDKSVTWKFVDTNKSNLNQNERFPVVPITLEVPPHGKLGCGICKGPQW--KPGIFVQFTKDACVAKDAG-LK 151 (433)
Q Consensus 75 ~g~~~~~~~~~~~sv~l~~~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~gg~~~--~~GV~V~~V~~gspA~~aG-L~ 151 (433)
++..... |. .....+.+.......||+.+...... ..|++|..|.++++|+++| |+
T Consensus 97 ~~~~~~~-------------~~--------~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~ 155 (196)
T 1p1d_A 97 DVAESVI-------------PS--------SGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLE 155 (196)
T ss_dssp CSCSCCB-------------CC--------SSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCC
T ss_pred cCCCCCC-------------CC--------CCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCC
Confidence 8732100 00 00111222222345688887653211 3689999999999999999 99
Q ss_pred CCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEEEEECC
Q psy12296 152 CGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELLVHRGV 191 (433)
Q Consensus 152 ~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~V~R~~ 191 (433)
+||+|++|||+++. ..++.++.+.++. ++.+.|+|.|++
T Consensus 156 ~GD~I~~vng~~v~-~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 156 LGDKLLAIDNIRLD-SCSMEDAVQILQQCEDLVKLKIRKDE 195 (196)
T ss_dssp TTCEEEEETTEEGG-GCCHHHHHHHHHHCTTCEEEEEECCC
T ss_pred CCCEEEEECCEECC-CCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 99999999999999 5557888777765 488999999975
No 5
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.84 E-value=3e-20 Score=203.80 Aligned_cols=164 Identities=30% Similarity=0.449 Sum_probs=134.4
Q ss_pred CCeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
.++|||+|.||.+. ..|++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|.
T Consensus 69 ~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 148 (721)
T 2xkx_A 69 NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRR 148 (721)
T ss_pred CCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhccccccceEEEec
Confidence 36999999999875 5789999999999999999 99999999999999999999999988875 78899999887
Q ss_pred CcccCccccceeeeEeecCCCccCCCCCCCCccceEEeeCCCCCCCceeecCCC-----CCCceEEEEECCCChhhhcC-
Q psy12296 76 GMIPTKERDKSVTWKFVDTNKSNLNQNERFPVVPITLEVPPHGKLGCGICKGPQ-----WKPGIFVQFTKDACVAKDAG- 149 (433)
Q Consensus 76 g~~~~~~~~~~~sv~l~~~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~gg~~-----~~~GV~V~~V~~gspA~~aG- 149 (433)
+... ...+.++ |... ...|||.+.++.. ...|++|..|.++++|+++|
T Consensus 149 ~~~~----~~~~~v~---------------------l~k~-~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~ 202 (721)
T 2xkx_A 149 KPPA----EKVMEIK---------------------LIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGR 202 (721)
T ss_pred cccc----ccceeee---------------------eeee-cCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCC
Confidence 6210 0112222 2221 3458888876432 24689999999999999999
Q ss_pred CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCee
Q psy12296 150 LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVGL 193 (433)
Q Consensus 150 L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~~ 193 (433)
|++||+|++|||+++. ..++.+++..++.. ..+.|+|.|++..
T Consensus 203 L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~~v~l~V~R~g~~ 246 (721)
T 2xkx_A 203 LQIGDKILAVNSVGLE-DVMHEDAVAALKNTYDVVYLKVAKPSNA 246 (721)
T ss_pred CCCCCEEEEECCeeCC-CCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 9999999999999999 77788999888764 7899999998764
No 6
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.80 E-value=1.1e-18 Score=163.73 Aligned_cols=163 Identities=19% Similarity=0.103 Sum_probs=119.0
Q ss_pred eEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCC-CEEEEECCEecCCCCHHHH-HHHhcCCcEEEEEEEEcCcccCcc
Q psy12296 5 TLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIG-DQIIRINGFPIEDATHSEV-LQLIHSQNIISLKVRSVGMIPTKE 82 (433)
Q Consensus 5 gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~G-D~ILaVNG~~V~~~s~~ea-v~lL~~g~~V~L~V~R~g~~~~~~ 82 (433)
++|++...+.+...|++|..|.++|||++|||++| |+|++|||+++.++.+... +.....+..|+|+|.|.+.
T Consensus 3 g~~~~~~~~~~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~----- 77 (209)
T 3rle_A 3 GSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKT----- 77 (209)
T ss_dssp -----CCCTTSSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTT-----
T ss_pred chhhhhhccCCCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCC-----
Confidence 45666666777778999999999999999999999 9999999999999875332 2222347889999998752
Q ss_pred ccceeeeEeecCCCccCCCCCCCCccceEEeeCCCCCCCceeecC---CCCCCceEEEEECCCChhhhcCCCC-CCEEEE
Q psy12296 83 RDKSVTWKFVDTNKSNLNQNERFPVVPITLEVPPHGKLGCGICKG---PQWKPGIFVQFTKDACVAKDAGLKC-GDQILA 158 (433)
Q Consensus 83 ~~~~~sv~l~~~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~gg---~~~~~GV~V~~V~~gspA~~aGL~~-GD~Il~ 158 (433)
.....+++.+ ... ......+|+.+... .....|++|..|.++|||+++||++ ||+|++
T Consensus 78 -~~~~~v~l~p--~~~---------------~~~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ 139 (209)
T 3rle_A 78 -LELRETSVTP--SNL---------------WGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIG 139 (209)
T ss_dssp -CCEEEEEECC--CSS---------------SSSSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEE
T ss_pred -ceEEEEEEcc--ccc---------------ccccCccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEE
Confidence 1233333321 100 01234577766421 1113689999999999999999999 999999
Q ss_pred EccEecCChhhHHHHHHHhcCCCeEEEEEEECCe
Q psy12296 159 CNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVG 192 (433)
Q Consensus 159 ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~ 192 (433)
|||+ +.+..++.++++.. .++.+.|+|.|++.
T Consensus 140 ing~-v~~~~~l~~~l~~~-~g~~v~l~v~r~~~ 171 (209)
T 3rle_A 140 ADTV-MNESEDLFSLIETH-EAKPLKLYVYNTDT 171 (209)
T ss_dssp ESSC-CCSSSCHHHHHHHT-TTSCEEEEEEETTT
T ss_pred CCCE-eCCHHHHHHHHHhC-CCCeEEEEEEECCc
Confidence 9998 88788888888876 56889999988753
No 7
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.79 E-value=2e-18 Score=189.42 Aligned_cols=186 Identities=25% Similarity=0.395 Sum_probs=135.7
Q ss_pred CeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
.+|||+|.++.+. ..|++|..|.++|+|+++| |++||+|++|||++|.++++.+++.+++. +..|.|+|.|.+
T Consensus 165 ~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g 244 (721)
T 2xkx_A 165 KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPS 244 (721)
T ss_pred CCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 5799999986542 4699999999999999999 99999999999999999998888888875 788999999987
Q ss_pred cccCcccc--ce--------eeeEeec------------CCC---c-cCC----CC-CC--CCccceEEeeCCCCCCCce
Q psy12296 77 MIPTKERD--KS--------VTWKFVD------------TNK---S-NLN----QN-ER--FPVVPITLEVPPHGKLGCG 123 (433)
Q Consensus 77 ~~~~~~~~--~~--------~sv~l~~------------~p~---s-~~~----~~-~~--~~~~~v~L~~~~~~~LG~~ 123 (433)
........ .. ....... .+. . .+. .. .. .....+.|... ...|||.
T Consensus 245 ~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~~-~~~lG~~ 323 (721)
T 2xkx_A 245 NAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRG-STGLGFN 323 (721)
T ss_pred cccccCCCCCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEEEEC-CCCccEE
Confidence 43110000 00 0000000 000 0 000 00 00 01223444543 4679999
Q ss_pred eecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCe
Q psy12296 124 ICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVG 192 (433)
Q Consensus 124 l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~ 192 (433)
+.++.. ..|++|..|.++|+|+++| |++||+|++|||+++. ..+++++++.|+.. ..+.|+|.|+..
T Consensus 324 i~~~~~-~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~-~~~~~e~~~~l~~~~~~v~L~v~r~~~ 392 (721)
T 2xkx_A 324 IVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLR-NASHEQAAIALKNAGQTVTIIAQYKPE 392 (721)
T ss_pred EeccCC-CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECC-CCCHHHHHHHHHhcCCeEEEEEEeCch
Confidence 876543 4699999999999999999 9999999999999999 77899999999875 789999988753
No 8
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.78 E-value=1e-17 Score=151.15 Aligned_cols=146 Identities=20% Similarity=0.299 Sum_probs=111.5
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc--CCcEEEEEEEEcCcccC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH--SQNIISLKVRSVGMIPT 80 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~--~g~~V~L~V~R~g~~~~ 80 (433)
.++|||.+... ..|++|..|.++|||+++||++||+|++|||+++.++++..+..+++ .+..|+|+|+|.+
T Consensus 15 ~~~lG~~~~~~---~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~~---- 87 (166)
T 1w9e_A 15 DGKIGLRLKSI---DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRP---- 87 (166)
T ss_dssp TSCCSEEEEEE---TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCT----
T ss_pred CCcEeEEEEeC---CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcCC----
Confidence 46899999873 36899999999999999999999999999999999998755555554 4678999994432
Q ss_pred ccccceeeeEeecCCCccCCCCCCCCccceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEc
Q psy12296 81 KERDKSVTWKFVDTNKSNLNQNERFPVVPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACN 160 (433)
Q Consensus 81 ~~~~~~~sv~l~~~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~IN 160 (433)
...++.+.. .....||+.+. .| +|..|.++++|+++||++||+|++||
T Consensus 88 ----~~~~v~l~~---------------------~~~~~lG~~~~------~g-~v~~v~~~s~a~~aGl~~GD~I~~in 135 (166)
T 1w9e_A 88 ----FERTITMHK---------------------DSTGHVGFIFK------NG-KITSIVKDSSAARNGLLTEHNICEIN 135 (166)
T ss_dssp ----TCEEEEEEC---------------------CTTSCCSEEEE------TT-EEEEECTTSHHHHTTCCSSEEEEEET
T ss_pred ----CcEEEEEec---------------------CCCCcEeEEEe------CC-EEEEEccCCHHHHcCCCCCCEEEEEC
Confidence 122233321 12356788875 35 79999999999999999999999999
Q ss_pred cEecCChhhHHHHHHH-hcCCCeEEEEEE
Q psy12296 161 GVKFSPDVTFEHAVSV-MKSSCLLELLVH 188 (433)
Q Consensus 161 G~~v~s~~s~~eav~~-Lr~~~~v~L~V~ 188 (433)
|+++. .....++... .+.+..+.+.|.
T Consensus 136 g~~v~-~~~~~~v~~~v~r~g~~~~l~v~ 163 (166)
T 1w9e_A 136 GQNVI-GLKDSQIADILSTSGTVVTITIM 163 (166)
T ss_dssp TEECT-TCCHHHHHHHHHHSCSEEEEEEE
T ss_pred CEECC-CCChHHHHHHHhhCCCEEEEEEE
Confidence 99999 4466665444 455566766654
No 9
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.77 E-value=1.8e-17 Score=171.83 Aligned_cols=170 Identities=19% Similarity=0.208 Sum_probs=117.6
Q ss_pred eEeEEEEe---------cCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHH-HHHhcCCcEEEEEEEE
Q psy12296 5 TLGFSIRG---------GREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEV-LQLIHSQNIISLKVRS 74 (433)
Q Consensus 5 gLGfsI~g---------G~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~ea-v~lL~~g~~V~L~V~R 74 (433)
.||+.+.. |++...|++|..|.++|||+++||+.||+|++|||+++.++.+... +.....|+.|+|+|.|
T Consensus 241 ~lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R 320 (436)
T 4a8c_A 241 LLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLR 320 (436)
T ss_pred cCceEecccCHHHHHHhCCCCCcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 56776653 2344579999999999999999999999999999999999854322 2222347899999999
Q ss_pred cCcccCccccceeeeEeecCCCccCCCCCCCCccceEEeeCCCCCCCceeecC-----CCCCCceEEEEECCCChhhhcC
Q psy12296 75 VGMIPTKERDKSVTWKFVDTNKSNLNQNERFPVVPITLEVPPHGKLGCGICKG-----PQWKPGIFVQFTKDACVAKDAG 149 (433)
Q Consensus 75 ~g~~~~~~~~~~~sv~l~~~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~gg-----~~~~~GV~V~~V~~gspA~~aG 149 (433)
++. ...+.+.+...+...... . ...+|+..... .....|++|..|.++++|+++|
T Consensus 321 ~g~------~~~~~v~l~~~~~~~~~~----~----------~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG 380 (436)
T 4a8c_A 321 NGK------PLEVEVTLDTSTSSSASA----E----------MITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAG 380 (436)
T ss_pred CCE------EEEEEEEECCCCcccccc----c----------ccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcC
Confidence 873 234444443322111000 0 00122221111 1123589999999999999999
Q ss_pred CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCeeeeec
Q psy12296 150 LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVGLDLFP 197 (433)
Q Consensus 150 L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~~~~~~ 197 (433)
|++||+|++|||+++.+. +++.+.++.. ..+.|+|.|++....+.
T Consensus 381 L~~GD~I~~vng~~v~~~---~~~~~~l~~~~~~v~l~v~R~g~~~~~~ 426 (436)
T 4a8c_A 381 LQKDDVIIGVNRDRVNSI---AEMRKVLAAKPAIIALQIVRGNESIYLL 426 (436)
T ss_pred CCCCCEEEEECCEECCCH---HHHHHHHHhCCCeEEEEEEECCEEEEEE
Confidence 999999999999999954 4455554443 68999999999776554
No 10
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.77 E-value=1.4e-19 Score=185.19 Aligned_cols=158 Identities=22% Similarity=0.258 Sum_probs=63.1
Q ss_pred CCeEeEEEEecCC--CCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGRE--HTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~--~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~g 76 (433)
+++|||+|.++.. ...|++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|.+
T Consensus 215 ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~ 294 (388)
T 3suz_A 215 GEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCP 294 (388)
T ss_dssp SCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECC
T ss_pred CCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCcccccccccc
Confidence 5789999998432 12469999999999999999 99999999999999999998888888864 456999999865
Q ss_pred cccCccccceeeeEeecCCCccCCCCCCCCccceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEE
Q psy12296 77 MIPTKERDKSVTWKFVDTNKSNLNQNERFPVVPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQI 156 (433)
Q Consensus 77 ~~~~~~~~~~~sv~l~~~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~I 156 (433)
. ..++.+.. ......||+.+.+ .+|..|.++++|+++||++||+|
T Consensus 295 ~--------~~~v~l~~--------------------~~~~~~lG~~i~~-------g~I~~V~~gs~A~~aGL~~GD~I 339 (388)
T 3suz_A 295 P--------VTTVLIKR--------------------PDLKYQLGFSVQN-------GIICSLMRGGIAERGGVRVGHRI 339 (388)
T ss_dssp S--------CC---------------------------------------------------------------------
T ss_pred c--------cceeeEee--------------------cCCCCccceEEec-------CEEEEeecCCHHHHcCCCCCCEE
Confidence 2 11111100 1123467887642 27999999999999999999999
Q ss_pred EEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCeeeee
Q psy12296 157 LACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVGLDLF 196 (433)
Q Consensus 157 l~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~~~~~ 196 (433)
++|||+++. ..+++++++.++.. ..+.|+|.+......+
T Consensus 340 l~VNg~~v~-~~s~~~~~~~l~~~~~~v~L~V~p~~~~~ll 379 (388)
T 3suz_A 340 IEINGQSVV-ATAHEKIVQALSNSVGEIHMKTMPAAMFRLL 379 (388)
T ss_dssp -----------------------------------------
T ss_pred EEECCEECC-CCCHHHHHHHHHhCCCeEEEEEEeccccccc
Confidence 999999998 78899999998876 6788888665433333
No 11
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.73 E-value=6.3e-17 Score=168.54 Aligned_cols=171 Identities=23% Similarity=0.262 Sum_probs=117.9
Q ss_pred CeEeEEEEe---------cCCCC-CCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHh---cCCcEEEE
Q psy12296 4 GTLGFSIRG---------GREHT-TGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLI---HSQNIISL 70 (433)
Q Consensus 4 ~gLGfsI~g---------G~~~~-~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL---~~g~~V~L 70 (433)
+.||+.+.. |++.. .|++|..|.++|||+++||++||+|++|||++|.++.+ +...+ ..|+.|+|
T Consensus 258 ~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~--l~~~l~~~~~g~~v~l 335 (451)
T 3pv2_A 258 GLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQ--VKTTISLLRVGSTVKI 335 (451)
T ss_dssp CBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH--HHHHHHTSCTTCEEEE
T ss_pred ccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHH--HHHHHHhcCCCCEEEE
Confidence 457887764 33334 79999999999999999999999999999999999844 44333 34889999
Q ss_pred EEEEcCcccCccccceeeeEeecCCCccCCCCCCCCccceEEeeCCCCCCCceeec------CCCCCCceEEEEECCCCh
Q psy12296 71 KVRSVGMIPTKERDKSVTWKFVDTNKSNLNQNERFPVVPITLEVPPHGKLGCGICK------GPQWKPGIFVQFTKDACV 144 (433)
Q Consensus 71 ~V~R~g~~~~~~~~~~~sv~l~~~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~g------g~~~~~GV~V~~V~~gsp 144 (433)
+|.|++. ...+.+++...+....... . .....+|+.+.. ......|++|..|.++|+
T Consensus 336 ~V~R~g~------~~~~~v~l~~~~~~~~~~~------~-----~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gsp 398 (451)
T 3pv2_A 336 IVERDNK------PLTLSAVVTDIKSHEQKLQ------S-----NNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSA 398 (451)
T ss_dssp EEEETTE------EEEEEEECBCHHHHHHHHH------H-----HSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSH
T ss_pred EEEECCE------EEEEEEEEccCCccccccc------c-----ccccccccccccCChhHhcccCCCceEEEEECCCCH
Confidence 9999873 2333333322211000000 0 000112222210 001125899999999999
Q ss_pred hhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCeeeee
Q psy12296 145 AKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVGLDLF 196 (433)
Q Consensus 145 A~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~~~~~ 196 (433)
|+++||++||+|++|||+++.+ ++++.+.++.. +.+.|+|.|++...++
T Consensus 399 A~~aGL~~GD~I~~Vng~~v~~---~~~~~~~l~~~~~~v~l~v~R~g~~~~v 448 (451)
T 3pv2_A 399 GWRAGIRPGDIIISANKKPVTD---VKSLQTIAQEKKKELLVQVLRGPGSMYL 448 (451)
T ss_dssp HHHHTCCTTCEEEEETTEECCS---HHHHHHHTTSSCSCEEEEEEETTEEEEE
T ss_pred HHHcCCCCCCEEEEECCEECCC---HHHHHHHHhcCCCeEEEEEEECCEEEEE
Confidence 9999999999999999999994 45555555544 7899999999877655
No 12
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.58 E-value=3.7e-16 Score=162.59 Aligned_cols=156 Identities=24% Similarity=0.342 Sum_probs=52.9
Q ss_pred CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcCcccCccccceeeeEeec
Q psy12296 17 TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVGMIPTKERDKSVTWKFVD 93 (433)
Q Consensus 17 ~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g~~~~~~~~~~~sv~l~~ 93 (433)
..|++|..|.++|||+++||++||+|++|||+.+.++ .++...+. .|+.|+|+|.|++.. ..+.+++..
T Consensus 285 ~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~------~~~~v~~~~ 356 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGKQ------VNVNLELQQ 356 (448)
T ss_dssp CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSCE------EECCCC---
T ss_pred CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEE------EEEEEEEec
Confidence 4699999999999999999999999999999999998 44665554 378899999987731 222222211
Q ss_pred CCCccCCCCCCCCccceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHH
Q psy12296 94 TNKSNLNQNERFPVVPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHA 173 (433)
Q Consensus 94 ~p~s~~~~~~~~~~~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~ea 173 (433)
.+.... . .. . ....-+|+.+..- ....|++|..|.++++|+++||++||+|++|||+++.+ ++++
T Consensus 357 ~~~~~~----~-~~-~-----~~~~~~G~~l~~~-~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~---~~~l 421 (448)
T 1ky9_A 357 SSQNQV----D-SS-S-----IFNGIEGAEMSNK-GKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKN---IAEL 421 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCccc----c-cc-c-----ccccccceEeecc-CCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCC---HHHH
Confidence 110000 0 00 0 0011235554211 12458999999999999999999999999999999984 4455
Q ss_pred HHHhcCC-CeEEEEEEECCeeee
Q psy12296 174 VSVMKSS-CLLELLVHRGVGLDL 195 (433)
Q Consensus 174 v~~Lr~~-~~v~L~V~R~~~~~~ 195 (433)
.+.++.. ..+.|+|.|++....
T Consensus 422 ~~~l~~~~~~v~l~v~R~g~~~~ 444 (448)
T 1ky9_A 422 RKVLDSKPSVLALNIQRGDSTIY 444 (448)
T ss_dssp -----------------------
T ss_pred HHHHHcCCCeEEEEEEECCEEEE
Confidence 5555443 578899999876543
No 13
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.51 E-value=7.3e-13 Score=140.36 Aligned_cols=185 Identities=15% Similarity=0.155 Sum_probs=119.0
Q ss_pred CeEeEEEEe----------cCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCH-----------HHHHHHh
Q psy12296 4 GTLGFSIRG----------GREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATH-----------SEVLQLI 62 (433)
Q Consensus 4 ~gLGfsI~g----------G~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~-----------~eav~lL 62 (433)
..||+.+.. |++...|++|..|.++|||+++ |+.||+|++|||+.|.+... ..++...
T Consensus 253 ~~LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~ 331 (539)
T 4fln_A 253 PCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQK 331 (539)
T ss_dssp CBCCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTS
T ss_pred eecceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcC
Confidence 357888765 2344579999999999999987 99999999999999976431 3344555
Q ss_pred cCCcEEEEEEEEcCcccCccccceeeeEeecCCCccCCCCC--CCC---ccceEE---ee-----CCCCCCCceee----
Q psy12296 63 HSQNIISLKVRSVGMIPTKERDKSVTWKFVDTNKSNLNQNE--RFP---VVPITL---EV-----PPHGKLGCGIC---- 125 (433)
Q Consensus 63 ~~g~~V~L~V~R~g~~~~~~~~~~~sv~l~~~p~s~~~~~~--~~~---~~~v~L---~~-----~~~~~LG~~l~---- 125 (433)
+.|+.|+|+|.|++ +...+.+++...+...+.... ... ...+.+ .. .....+++.+.
T Consensus 332 ~~Gd~v~l~v~R~G------k~~~v~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~ 405 (539)
T 4fln_A 332 FAGDIAEIGIIRAG------EHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKAR 405 (539)
T ss_dssp CTTCEEEEEEEETT------EEEEEEEECBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHH
T ss_pred CCCCEEEEEEEECC------EEEEEEEEEccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhh
Confidence 56999999999998 335566666554432221110 000 011111 10 01112222111
Q ss_pred ---cCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeec
Q psy12296 126 ---KGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFP 197 (433)
Q Consensus 126 ---gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~ 197 (433)
.......||+|+.|.++++|..+|++.||+|++|||+++.+..++.++++..+ .+.+.|.+. ++...++.
T Consensus 406 ~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~l~~~l~~~k-~~~l~~~~~-~~~~ivL~ 478 (539)
T 4fln_A 406 YSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCK-DKYLVFEFE-DNYVAVLE 478 (539)
T ss_dssp HCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHHHHHHHHTCC-SSEEEEEET-TSCEEEEE
T ss_pred hhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHHHHHHHHHcC-CCeEEEEEC-CCEEEEEE
Confidence 01233568999999999999999999999999999999996666655555322 155666653 34444443
No 14
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.49 E-value=1.8e-13 Score=114.71 Aligned_cols=74 Identities=31% Similarity=0.618 Sum_probs=67.6
Q ss_pred CCeEeEEEEecCCCCC-----CeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTT-----GVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~-----Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
+.+|||+|.||.+... |++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|.
T Consensus 12 ~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 91 (106)
T 4amh_A 12 SKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAKP 91 (106)
T ss_dssp CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEECC
T ss_pred CCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeC
Confidence 5799999999988643 89999999999999999 99999999999999999999998888875 67899999987
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 92 ~ 92 (106)
T 4amh_A 92 G 92 (106)
T ss_dssp S
T ss_pred C
Confidence 6
No 15
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.47 E-value=1.4e-13 Score=111.19 Aligned_cols=74 Identities=24% Similarity=0.448 Sum_probs=67.7
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||+|.+|.+...|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. ++.+.|+|.|.+
T Consensus 12 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 86 (89)
T 2q3g_A 12 PAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAI 86 (89)
T ss_dssp SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEEEC
T ss_pred CCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 47899999998887789999999999999999999999999999999999988888888874 788999999876
No 16
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.46 E-value=1.9e-13 Score=110.10 Aligned_cols=74 Identities=20% Similarity=0.446 Sum_probs=67.7
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||+|.+|.+...+++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..+.|+|.|.+
T Consensus 12 ~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 86 (88)
T 2uzc_A 12 PAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRES 86 (88)
T ss_dssp SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 46899999998887789999999999999999999999999999999999998888888874 788999998865
No 17
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.45 E-value=1.7e-13 Score=109.53 Aligned_cols=74 Identities=30% Similarity=0.504 Sum_probs=67.1
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||+|.+|.+...|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..+.|+|.|.+
T Consensus 10 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 84 (85)
T 1rgw_A 10 PGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSK 84 (85)
T ss_dssp SSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEESCC
T ss_pred CCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 46899999998887789999999999999999999999999999999999998888888874 677999998764
No 18
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.44 E-value=3e-13 Score=108.76 Aligned_cols=74 Identities=30% Similarity=0.487 Sum_probs=67.7
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
.++|||+|.+|.+...|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. ...|.|+|.|++
T Consensus 11 ~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 85 (87)
T 2pa1_A 11 PAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRIT 85 (87)
T ss_dssp SSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEECC
T ss_pred CCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEecC
Confidence 46899999998887789999999999999999999999999999999999888899988875 478999999876
No 19
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.44 E-value=3.4e-13 Score=109.37 Aligned_cols=74 Identities=31% Similarity=0.473 Sum_probs=68.1
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||++.+|.+...|++|..|.++|||+++||++||+|++|||+++.++.+.++..+++. +..+.|+|.|++
T Consensus 12 ~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g 86 (91)
T 2pkt_A 12 PGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSE 86 (91)
T ss_dssp SSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEEEC
T ss_pred CCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 46899999998887789999999999999999999999999999999999998888888875 789999999987
No 20
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.42 E-value=5.1e-13 Score=108.09 Aligned_cols=73 Identities=33% Similarity=0.607 Sum_probs=66.5
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhC-CCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERS-GLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~a-GL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
+++|||+|.++.+...|++|..|.++|||+++ ||++||+|++|||+++.++++.+++.+++. +..++|+|.|.
T Consensus 15 ~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 89 (90)
T 1qav_A 15 AGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM 89 (90)
T ss_dssp TTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEC
T ss_pred CCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEEe
Confidence 47999999998887789999999999999999 799999999999999999999998888875 78899999873
No 21
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.41 E-value=5.8e-13 Score=109.30 Aligned_cols=74 Identities=28% Similarity=0.579 Sum_probs=65.7
Q ss_pred CCeEeEEEEecCCCCC------CeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTT------GVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~------Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R 74 (433)
+++|||+|.+|.+... |++|..|.++|||+++| |++||+|++|||+++.++++.++..+++. +..|.|+|.|
T Consensus 16 ~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R 95 (98)
T 1ihj_A 16 KKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT 95 (98)
T ss_dssp SSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEe
Confidence 5799999999876544 89999999999999999 99999999999999999988888877764 7899999998
Q ss_pred cC
Q psy12296 75 VG 76 (433)
Q Consensus 75 ~g 76 (433)
++
T Consensus 96 ~g 97 (98)
T 1ihj_A 96 FD 97 (98)
T ss_dssp C-
T ss_pred CC
Confidence 75
No 22
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.40 E-value=1.2e-12 Score=108.09 Aligned_cols=74 Identities=30% Similarity=0.580 Sum_probs=66.8
Q ss_pred CCeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
.++|||+|.+|.+. ..|++|..|.++|+|+++| |++||+|++|||+++.++++.++..+++. ++.|.|+|.|.
T Consensus 17 ~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 96 (101)
T 2jik_A 17 PSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHR 96 (101)
T ss_dssp TTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeC
Confidence 36899999998775 3699999999999999999 99999999999999999998888888874 78899999987
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 97 ~ 97 (101)
T 2jik_A 97 L 97 (101)
T ss_dssp S
T ss_pred C
Confidence 6
No 23
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.40 E-value=6.8e-13 Score=110.50 Aligned_cols=74 Identities=38% Similarity=0.728 Sum_probs=68.4
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g 76 (433)
+++|||+|.++.+...|++|..|.++|||+++||++||+|++|||+++.++++.+++.+++.+..+.|+|.|..
T Consensus 26 ~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~v~l~v~r~~ 99 (104)
T 1wi2_A 26 GAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKTAREISMRVRFFS 99 (104)
T ss_dssp TCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHHSSSEEEEEECCC
T ss_pred CCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCEEEEEEEECC
Confidence 47899999998877789999999999999999999999999999999999888999999987888999998865
No 24
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=3.9e-13 Score=111.21 Aligned_cols=76 Identities=46% Similarity=0.741 Sum_probs=68.6
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcCcc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVGMI 78 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g~~ 78 (433)
..+|||+|.++.+...|++|..|.++|||+++||++||+|++|||+++.++.+.+++..++.+..|.|+|.|++..
T Consensus 20 ~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~v~l~v~R~g~~ 95 (101)
T 1uez_A 20 HEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRI 95 (101)
T ss_dssp TTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHSSSSSSCCEEECCCCCC
T ss_pred CCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhhcCCCeEEEEEEECCcc
Confidence 4689999999877778999999999999999999999999999999999999888888888777899999987743
No 25
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.40 E-value=1e-12 Score=107.48 Aligned_cols=74 Identities=30% Similarity=0.652 Sum_probs=66.1
Q ss_pred CCeEeEEEEecCC------CCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGRE------HTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~------~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~ 75 (433)
.++|||+|.+|.+ ...|++|..|.++|||+++||++||+|++|||+++.++.+.+++..++ .+..|.|+|.|+
T Consensus 13 ~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 92 (97)
T 2w4f_A 13 TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRE 92 (97)
T ss_dssp TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECC
T ss_pred CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeC
Confidence 5799999998765 357999999999999999999999999999999999998877776665 588999999997
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 93 g 93 (97)
T 2w4f_A 93 R 93 (97)
T ss_dssp S
T ss_pred C
Confidence 7
No 26
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.40 E-value=1.1e-12 Score=104.84 Aligned_cols=72 Identities=22% Similarity=0.387 Sum_probs=64.8
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R 74 (433)
..+|||++.+|.+...|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++. ++.+.|+|.|
T Consensus 10 ~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 10 SRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 468999999987777889999999999999999 99999999999999999988888888864 6789998865
No 27
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.40 E-value=9.5e-13 Score=106.36 Aligned_cols=74 Identities=31% Similarity=0.609 Sum_probs=66.1
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~g 76 (433)
..+|||+|.+|.+...+++|..|.++|||+++| |++||+|++|||+++.+.++.++..+++. +..|+|+|.|..
T Consensus 12 ~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 12 ETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp TTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEECC
T ss_pred CCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 468999999988877889999999999999999 99999999999999999998888888864 348999998753
No 28
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=1.3e-12 Score=107.84 Aligned_cols=75 Identities=44% Similarity=0.772 Sum_probs=68.2
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcCcc
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVGMI 78 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g~~ 78 (433)
+.|||++.++.+...|++|..|.++|||+++||++||+|++|||+++.++++.+++..++.+..|.|+|.|++..
T Consensus 22 ~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 22 GRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTSSSRLHMMVRRMGSG 96 (100)
T ss_dssp SSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHSCSSEEEEEEECSCC
T ss_pred CCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcCCCEEEEEEEECCcC
Confidence 469999998766567999999999999999999999999999999999988888999998889999999998753
No 29
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=5e-13 Score=109.22 Aligned_cols=74 Identities=32% Similarity=0.406 Sum_probs=67.2
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||.|.+|.+...+++|..|.++|||+++||++||+|++|||+++.++++.++..+++. ++.+.|+|.|.+
T Consensus 17 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 91 (94)
T 2eeg_A 17 PSPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLSVSSGP 91 (94)
T ss_dssp SSCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEEEEECCS
T ss_pred CCccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 46899999999888889999999999999999999999999999999999988888877764 778999998876
No 30
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.39 E-value=1.1e-12 Score=108.66 Aligned_cols=75 Identities=29% Similarity=0.576 Sum_probs=66.9
Q ss_pred CCeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
..+|||+|.+|.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..++. +..|.|+|.|.
T Consensus 14 ~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 93 (102)
T 2i1n_A 14 NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRR 93 (102)
T ss_dssp TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 46899999998764 4699999999999999999 99999999999999999988888877764 78999999997
Q ss_pred Cc
Q psy12296 76 GM 77 (433)
Q Consensus 76 g~ 77 (433)
+.
T Consensus 94 ~~ 95 (102)
T 2i1n_A 94 QP 95 (102)
T ss_dssp CC
T ss_pred CC
Confidence 73
No 31
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.39 E-value=1.4e-12 Score=107.08 Aligned_cols=74 Identities=30% Similarity=0.531 Sum_probs=66.4
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||+|.++.+...|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++. +..|.|+|.|.+
T Consensus 15 ~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 90 (97)
T 1n7e_A 15 GGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQT 90 (97)
T ss_dssp TSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 457999999876655799999999999999999 99999999999999999888888888864 788999999876
No 32
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.39 E-value=1.2e-12 Score=112.19 Aligned_cols=74 Identities=27% Similarity=0.539 Sum_probs=66.6
Q ss_pred CCeEeEEEEecCC---CCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGRE---HTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~---~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||+|.+|.+ ...|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|..
T Consensus 35 ~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 35 GESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALEVK 113 (118)
T ss_dssp TCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSEEEEEEEEEE
T ss_pred CCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 4799999999874 34689999999999999999 99999999999999999999999999976 788999998753
No 33
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.39 E-value=1.5e-12 Score=105.84 Aligned_cols=74 Identities=28% Similarity=0.591 Sum_probs=65.4
Q ss_pred CCeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
..+|||+|.+|.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++. +..|.|+|.|.
T Consensus 13 ~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 92 (94)
T 2fe5_A 13 PKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP 92 (94)
T ss_dssp TTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCCSEEEEEEECC
T ss_pred CCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcC
Confidence 46899999998764 3589999999999999999 99999999999999999988888888874 67899999876
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 93 g 93 (94)
T 2fe5_A 93 G 93 (94)
T ss_dssp C
T ss_pred C
Confidence 5
No 34
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.39 E-value=8.9e-13 Score=109.79 Aligned_cols=75 Identities=33% Similarity=0.671 Sum_probs=67.4
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhC-CCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcCc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERS-GLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVGM 77 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~a-GL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g~ 77 (433)
+++|||+|.+|.+...|++|..|.++|+|+++ ||++||+|++|||+++.++++.+++.+++. +..|+|+|.|...
T Consensus 20 ~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 20 HEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVAL 96 (103)
T ss_dssp SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEEEEEEECC-
T ss_pred CCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCC
Confidence 47999999998887779999999999999995 899999999999999999999999988875 6789999988663
No 35
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=110.61 Aligned_cols=74 Identities=35% Similarity=0.599 Sum_probs=67.2
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||+|.++.+...|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. +..|.|+|.|.+
T Consensus 34 ~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 109 (112)
T 2r4h_A 34 AKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRGE 109 (112)
T ss_dssp TTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECCE
T ss_pred CCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 358999999988777899999999999999999 99999999999999999988888888874 788999998865
No 36
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=6.5e-13 Score=110.43 Aligned_cols=74 Identities=31% Similarity=0.589 Sum_probs=67.8
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~g 76 (433)
..+|||+|.+|.+...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|.+
T Consensus 19 ~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 96 (103)
T 1uep_A 19 ESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKV 96 (103)
T ss_dssp SSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCC
Confidence 468999999988877899999999999999999 99999999999999999988899888864 689999999876
No 37
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=2.3e-12 Score=110.67 Aligned_cols=75 Identities=31% Similarity=0.404 Sum_probs=68.5
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEcCc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSVGM 77 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~g~ 77 (433)
..+|||+|.+|.+...|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+|+. +..|.|+|.|...
T Consensus 29 ~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 29 NMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp TTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCC
T ss_pred CCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 458999999988877899999999999999999 99999999999999999999999988875 6889999999763
No 38
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.38 E-value=2.2e-12 Score=105.86 Aligned_cols=74 Identities=28% Similarity=0.513 Sum_probs=66.6
Q ss_pred CCeEeEEEEecCCCC-CCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHT-TGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~-~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||+|.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++. ++.|.|+|.|.+
T Consensus 14 ~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 90 (98)
T 2opg_A 14 RTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRLTLYRDE 90 (98)
T ss_dssp TTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEECS
T ss_pred CCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCC
Confidence 468999999987654 699999999999999999 99999999999999999988888888874 688999999877
No 39
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.38 E-value=2.1e-12 Score=105.52 Aligned_cols=74 Identities=28% Similarity=0.607 Sum_probs=66.2
Q ss_pred CCeEeEEEEecCCC---CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREH---TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~---~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||+|.+|.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++. +..|.|+|.|.+
T Consensus 15 ~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 15 DNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQ 93 (96)
T ss_dssp SSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEECCS
T ss_pred CCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 46899999998764 3589999999999999999 99999999999999999998888888875 788999998865
No 40
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.38 E-value=1.6e-12 Score=108.37 Aligned_cols=74 Identities=30% Similarity=0.580 Sum_probs=66.4
Q ss_pred CCeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
.++|||+|.+|.+. ..|++|..|.++|+|+++| |++||+|++|||+++.+.++.+++..++. +..|.|+|.|.
T Consensus 13 ~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 92 (105)
T 2awx_A 13 PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTSDFVYLKVAKP 92 (105)
T ss_dssp TTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCCSEEEEEEECC
T ss_pred CCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcC
Confidence 46899999998764 2589999999999999999 99999999999999999998888888875 78899999987
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 93 ~ 93 (105)
T 2awx_A 93 T 93 (105)
T ss_dssp C
T ss_pred C
Confidence 6
No 41
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.38 E-value=1.1e-12 Score=105.38 Aligned_cols=72 Identities=33% Similarity=0.670 Sum_probs=64.7
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHh-CCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAER-SGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~-aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R 74 (433)
+.+|||++.+|.+...+++|..|.++|||++ +||++||+|++|||+++.++++.+++.+++. ++.++|+|.+
T Consensus 13 ~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~~ 86 (87)
T 4e34_A 13 HEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVY 86 (87)
T ss_dssp TBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 4689999999887777899999999999999 7999999999999999999999999888864 6788888864
No 42
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=9.2e-13 Score=112.18 Aligned_cols=74 Identities=31% Similarity=0.520 Sum_probs=66.9
Q ss_pred CCeEeEEEEecCCCC-----CCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHT-----TGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~-----~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
+.+|||+|.++.+.. .|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|+
T Consensus 29 ~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 108 (117)
T 1ujd_A 29 GNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLD 108 (117)
T ss_dssp CCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCSSCEEEEEESS
T ss_pred CCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEEC
Confidence 478999999987642 389999999999999999 99999999999999999999999999876 68899999987
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 109 ~ 109 (117)
T 1ujd_A 109 L 109 (117)
T ss_dssp C
T ss_pred C
Confidence 6
No 43
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.38 E-value=2.1e-12 Score=104.37 Aligned_cols=73 Identities=30% Similarity=0.517 Sum_probs=65.6
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||+|.++.+ ..|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..|.|+|.|.+
T Consensus 14 ~~g~G~~~~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 87 (90)
T 2he4_A 14 PQGYGFNLHSDKS-RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 87 (90)
T ss_dssp TTBCCEEEEECSS-SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEEEEECCC
T ss_pred CCCccEEEEccCC-CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEccC
Confidence 3689999998654 569999999999999999999999999999999999999889998876 688999998865
No 44
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.37 E-value=1.6e-12 Score=106.37 Aligned_cols=74 Identities=27% Similarity=0.496 Sum_probs=66.3
Q ss_pred CCeEeEEEEe--cCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRG--GREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~g--G~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||+|.+ |.+...|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..|.|+|.|.+
T Consensus 13 ~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 89 (96)
T 2v90_A 13 PQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVSLTVVDPE 89 (96)
T ss_dssp TTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECCC
T ss_pred CCcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEECCC
Confidence 3589999998 4555568999999999999999999999999999999999888889888876 789999999876
No 45
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=1.9e-12 Score=108.24 Aligned_cols=75 Identities=35% Similarity=0.605 Sum_probs=66.4
Q ss_pred CCeEeEEEEecCCC--------CCCeEEEEeCCCCHhHhC-CCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEE
Q psy12296 3 NGTLGFSIRGGREH--------TTGVFVSNVEPKSEAERS-GLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKV 72 (433)
Q Consensus 3 ~~gLGfsI~gG~~~--------~~Gv~Vs~V~pgSpA~~a-GL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V 72 (433)
+++|||+|.++.+. ..|++|..|.++|||+++ ||++||+|++|||+++.++++.+++.+++ .+..|.|+|
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 97 (107)
T 1uhp_A 18 SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQV 97 (107)
T ss_dssp SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEE
T ss_pred CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEE
Confidence 47899999997642 568999999999999999 79999999999999999999999888887 478899999
Q ss_pred EEcCc
Q psy12296 73 RSVGM 77 (433)
Q Consensus 73 ~R~g~ 77 (433)
.|...
T Consensus 98 ~R~~~ 102 (107)
T 1uhp_A 98 LRRTS 102 (107)
T ss_dssp EECCS
T ss_pred EeCCC
Confidence 88763
No 46
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.37 E-value=5.4e-13 Score=114.44 Aligned_cols=73 Identities=30% Similarity=0.556 Sum_probs=65.3
Q ss_pred CeEeEEEEecCCC---CCCeEEEEeCCCCHhHhC-CCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREH---TTGVFVSNVEPKSEAERS-GLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~---~~Gv~Vs~V~pgSpA~~a-GL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
++|||+|.+|.+. ..|++|..|.++|||+++ ||++||+|++|||+++.++++.+++.+++. +..|+|+|.|.+
T Consensus 36 ~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g 113 (120)
T 2iwo_A 36 DSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGSIEMQVVAGG 113 (120)
T ss_dssp -CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEECCT
T ss_pred CCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 5899999998763 358999999999999999 799999999999999999999999988874 678999999876
No 47
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.37 E-value=2.3e-12 Score=104.23 Aligned_cols=71 Identities=27% Similarity=0.437 Sum_probs=63.0
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
++|||+|.++.+ ..|++|..|.++|||+++||++||+|++|||+++.++.+.++..+++. ++.+.|+|.|+
T Consensus 19 ~~~G~~~~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 19 EDFGFSVADGLL-EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN 90 (91)
T ss_dssp SSSSEEEEECTT-SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEEC
T ss_pred CCccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 589999998655 379999999999999999999999999999999999988777777764 78899999874
No 48
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.37 E-value=2e-12 Score=105.59 Aligned_cols=73 Identities=25% Similarity=0.409 Sum_probs=65.1
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
+.+|||+|.++.+ ..|++|..|.++|||+++| |++||+|++|||+++.++++.++...++ .+..+.|+|.|.+
T Consensus 15 ~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 89 (95)
T 2vwr_A 15 GEQLGIKLVRRTD-EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNLTIARPG 89 (95)
T ss_dssp TCCCCEEEEECSS-SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEEES
T ss_pred CCcccEEEEeccC-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCC
Confidence 4689999998654 4699999999999999999 9999999999999999998888887776 4789999999876
No 49
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=2.6e-12 Score=107.86 Aligned_cols=75 Identities=29% Similarity=0.634 Sum_probs=66.9
Q ss_pred CCeEeEEEEecCC------CCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGRE------HTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~------~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~ 75 (433)
.++|||+|.+|.+ ...|++|..|.++|||+++||++||+|++|||+++.+..+.+++..++ .+..|.|+|.|+
T Consensus 25 ~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 104 (110)
T 1x5q_A 25 TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRE 104 (110)
T ss_dssp SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEEEC
T ss_pred CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhCCCCeEEEEEEEC
Confidence 5799999998865 457999999999999999999999999999999999998888777776 488999999998
Q ss_pred Cc
Q psy12296 76 GM 77 (433)
Q Consensus 76 g~ 77 (433)
+.
T Consensus 105 g~ 106 (110)
T 1x5q_A 105 SG 106 (110)
T ss_dssp SS
T ss_pred Cc
Confidence 73
No 50
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=1.8e-12 Score=110.56 Aligned_cols=74 Identities=28% Similarity=0.617 Sum_probs=66.7
Q ss_pred CCeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
.++|||+|.+|.+. ..|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|.
T Consensus 34 ~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 113 (117)
T 2byg_A 34 PKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKP 113 (117)
T ss_dssp TTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 36899999998653 3589999999999999999 99999999999999999999999998875 78899999986
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 114 ~ 114 (117)
T 2byg_A 114 T 114 (117)
T ss_dssp E
T ss_pred C
Confidence 5
No 51
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.36 E-value=1.6e-12 Score=106.40 Aligned_cols=74 Identities=27% Similarity=0.549 Sum_probs=66.5
Q ss_pred CCeEeEEEEecCCC----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREH----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
+.+|||+|.++.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++ .+..+.|+|.|++
T Consensus 13 ~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 92 (97)
T 2jil_A 13 GNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAALLIEYDV 92 (97)
T ss_dssp TTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEEC
T ss_pred CCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 46899999998653 4689999999999999999 9999999999999999988888888887 4789999999976
No 52
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=1.3e-12 Score=106.07 Aligned_cols=74 Identities=36% Similarity=0.673 Sum_probs=66.4
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
..+|||+|.++.+...|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++ .+..|.|+|.|..
T Consensus 15 ~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 15 DEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVRSGP 90 (93)
T ss_dssp TTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEEEEECCCC
T ss_pred CCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEeCC
Confidence 468999999988777899999999999999996 9999999999999999998888888886 4678999998764
No 53
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.36 E-value=1.4e-12 Score=104.95 Aligned_cols=65 Identities=23% Similarity=0.506 Sum_probs=58.6
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R 74 (433)
+++|||++.+| +|..|.++|||+++||++||+|++|||+++.+++|.+++++|++ +..|+|+|..
T Consensus 15 ~g~~Gf~i~~g-------~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v~p 80 (82)
T 1r6j_A 15 TGHVGFIFKNG-------KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 80 (82)
T ss_dssp TSCCCEEEETT-------EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCCeEEEEECC-------EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEe
Confidence 46899999864 37899999999999999999999999999999999999999985 7889999863
No 54
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.36 E-value=1.7e-12 Score=108.26 Aligned_cols=72 Identities=38% Similarity=0.597 Sum_probs=65.3
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC--CCCCCEEEEECCEecCCCCHHHHHHHhcC-Cc----EEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG--LLIGDQIIRINGFPIEDATHSEVLQLIHS-QN----IISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG--L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~----~V~L~V~R 74 (433)
.++|||.|.+|.+...+++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. +. .|.|+|.|
T Consensus 28 ~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 28 NGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp TSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred CCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 368999999988877799999999999999999 99999999999999999999999988875 33 89999876
No 55
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.35 E-value=5.5e-13 Score=110.77 Aligned_cols=74 Identities=20% Similarity=0.452 Sum_probs=67.0
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
+.+|||+|.+|.+...+++|..|.++|||+++||++||+|++|||+++.++++.++..+++ .++.+.|+|.|.+
T Consensus 14 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 88 (103)
T 1wf7_A 14 PAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS 88 (103)
T ss_dssp SSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEEEECCCS
T ss_pred CCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 4689999999988777899999999999999999999999999999999998888887775 4788999998876
No 56
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.35 E-value=2.8e-12 Score=104.73 Aligned_cols=73 Identities=34% Similarity=0.594 Sum_probs=64.4
Q ss_pred CCeEeEEEEecCC--------CCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEE
Q psy12296 3 NGTLGFSIRGGRE--------HTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVR 73 (433)
Q Consensus 3 ~~gLGfsI~gG~~--------~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~ 73 (433)
+.+|||+|.+|.+ ...|++|..|.++|||++ ||++||+|++|||+++.++++.+++..++ .+..|.|+|.
T Consensus 12 ~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 90 (95)
T 1mfg_A 12 DPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 90 (95)
T ss_dssp SSSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEE
T ss_pred CCCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhcCCCeEEEEEE
Confidence 4589999999874 356999999999999999 99999999999999999998888887776 4789999998
Q ss_pred EcC
Q psy12296 74 SVG 76 (433)
Q Consensus 74 R~g 76 (433)
|+.
T Consensus 91 R~~ 93 (95)
T 1mfg_A 91 REV 93 (95)
T ss_dssp EEC
T ss_pred eCC
Confidence 864
No 57
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.34 E-value=1e-12 Score=114.19 Aligned_cols=74 Identities=22% Similarity=0.444 Sum_probs=66.8
Q ss_pred CCeEeEEEEecCC---CCCCeEEEEeCCCCHhHhC-CCCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGRE---HTTGVFVSNVEPKSEAERS-GLLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~---~~~Gv~Vs~V~pgSpA~~a-GL~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~V~R~g 76 (433)
..+|||+|.+|.+ ...+++|..|.++|+|+++ ||++||+|++|||+++.++++.+++.+++. +..|.|+|+|..
T Consensus 39 ~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 39 SAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKS 118 (130)
T ss_dssp SSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEES
T ss_pred CCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCC
Confidence 4689999999877 3568999999999999999 799999999999999999999999999986 457999998865
No 58
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.34 E-value=2.9e-12 Score=118.30 Aligned_cols=76 Identities=43% Similarity=0.820 Sum_probs=70.7
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcCcc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVGMI 78 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g~~ 78 (433)
+++|||+|.+|.+...|++|..|.++|||+++||++||+|++|||++|.++++.+++.+++.+..|.|+|.|.+..
T Consensus 95 ~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~v~l~v~r~g~~ 170 (192)
T 3k1r_A 95 PEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTEKTVSIKVRHIGLI 170 (192)
T ss_dssp TTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTSSSEEEEEEEECCEE
T ss_pred CCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcCCCeEEEEEEECCcc
Confidence 5799999999888778999999999999999999999999999999999999999999998889999999998753
No 59
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.34 E-value=3.1e-12 Score=103.74 Aligned_cols=73 Identities=38% Similarity=0.605 Sum_probs=64.8
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
+++|||+|.++.+ ..|++|..|.++|||+++| |++||+|++|||+++.+.++.++..+++ .+..|.|+|.|.+
T Consensus 15 ~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 15 GKGLGLSIVGKRN-DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTLEVGRIS 89 (92)
T ss_dssp TSCCSEEEECCSS-SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECCC
T ss_pred CCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEccc
Confidence 4789999998644 5799999999999999999 9999999999999999988888888776 4788999998865
No 60
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.34 E-value=2.9e-12 Score=105.02 Aligned_cols=72 Identities=32% Similarity=0.534 Sum_probs=61.5
Q ss_pred CCeEeEEEEe-------cCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEE
Q psy12296 3 NGTLGFSIRG-------GREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~g-------G~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R 74 (433)
+++|||+|.+ +.+...|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..|.|+|.+
T Consensus 15 ~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~ 94 (96)
T 2ego_A 15 NQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLY 94 (96)
T ss_dssp TCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEEC
T ss_pred CCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEE
Confidence 4699999997 3344568999999999999999999999999999999999988888888864 5689998875
No 61
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.34 E-value=4.3e-12 Score=106.41 Aligned_cols=74 Identities=30% Similarity=0.514 Sum_probs=65.3
Q ss_pred CCeEeEEEEecCCCC------------CCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEE
Q psy12296 3 NGTLGFSIRGGREHT------------TGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIIS 69 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~------------~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~ 69 (433)
+++|||+|.++.+.. .|++|..|.++|+|+++||++||+|++|||+++.++++.+++.+++ .+..+.
T Consensus 18 ~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~ 97 (109)
T 1q3o_A 18 SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLM 97 (109)
T ss_dssp TSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEE
T ss_pred CCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEE
Confidence 579999999976532 3899999999999999999999999999999999999988888886 477899
Q ss_pred EEEEEcC
Q psy12296 70 LKVRSVG 76 (433)
Q Consensus 70 L~V~R~g 76 (433)
|+|.|..
T Consensus 98 l~v~~~~ 104 (109)
T 1q3o_A 98 VKVVMVT 104 (109)
T ss_dssp EEEEEEE
T ss_pred EEEEECC
Confidence 9998765
No 62
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.34 E-value=2.1e-12 Score=112.38 Aligned_cols=74 Identities=30% Similarity=0.482 Sum_probs=66.4
Q ss_pred CCeEeEEEEecCCCC---CCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHT---TGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~---~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~ 75 (433)
+++|||+|.+|.+.. .|+||..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|.
T Consensus 47 ~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 47 GAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp CTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 568999999987653 389999999999999999 99999999999999999999999988863 48899999987
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 127 g 127 (131)
T 1wfg_A 127 G 127 (131)
T ss_dssp C
T ss_pred C
Confidence 6
No 63
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.34 E-value=3.6e-12 Score=109.58 Aligned_cols=74 Identities=24% Similarity=0.444 Sum_probs=67.2
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
.++|||+|.+|.+...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|..
T Consensus 30 ~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 105 (125)
T 3hpk_A 30 QNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 105 (125)
T ss_dssp TSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEEC
T ss_pred CCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 468999999998877899999999999999999 99999999999999999999999988874 667999998844
No 64
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.33 E-value=2.8e-12 Score=111.79 Aligned_cols=74 Identities=30% Similarity=0.514 Sum_probs=65.8
Q ss_pred CCeEeEEEEecCCCC------------CCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEE
Q psy12296 3 NGTLGFSIRGGREHT------------TGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIIS 69 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~------------~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~ 69 (433)
.++|||+|.++.+.. .|++|..|.++|+|+++||++||+|++|||++|.++++.+++.+++ .+..|.
T Consensus 38 ~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~ 117 (132)
T 3l4f_D 38 SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLM 117 (132)
T ss_dssp TSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHHTTTEEE
T ss_pred CCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 479999999987632 3799999999999999999999999999999999999999998887 478899
Q ss_pred EEEEEcC
Q psy12296 70 LKVRSVG 76 (433)
Q Consensus 70 L~V~R~g 76 (433)
|+|.|..
T Consensus 118 l~v~~~~ 124 (132)
T 3l4f_D 118 VKVVMVT 124 (132)
T ss_dssp EEEECCC
T ss_pred EEEEECC
Confidence 9998765
No 65
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=3.7e-12 Score=108.69 Aligned_cols=74 Identities=30% Similarity=0.580 Sum_probs=66.8
Q ss_pred CCeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
..+|||+|.++.+. ..|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. ++.|.|+|.|.
T Consensus 27 ~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 106 (120)
T 2eno_A 27 PSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHR 106 (120)
T ss_dssp SSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHHCSEEEEEEEEE
T ss_pred CCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 36899999998764 5799999999999999999 99999999999999999998888888864 78899999987
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 107 ~ 107 (120)
T 2eno_A 107 L 107 (120)
T ss_dssp E
T ss_pred C
Confidence 6
No 66
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.33 E-value=5.9e-12 Score=104.37 Aligned_cols=71 Identities=34% Similarity=0.638 Sum_probs=63.5
Q ss_pred eEeEEEEecCCC------------CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEE
Q psy12296 5 TLGFSIRGGREH------------TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISL 70 (433)
Q Consensus 5 gLGfsI~gG~~~------------~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L 70 (433)
+|||+|.++.+. ..|++|..|.++|||+++||++||+|++|||+++.+.++.++...++. +..+.|
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l 99 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRL 99 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEE
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEE
Confidence 799999987653 568999999999999999999999999999999999988889988864 678999
Q ss_pred EEEEc
Q psy12296 71 KVRSV 75 (433)
Q Consensus 71 ~V~R~ 75 (433)
+|.|.
T Consensus 100 ~v~R~ 104 (104)
T 3sfj_A 100 LVTRQ 104 (104)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 99873
No 67
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.33 E-value=2.4e-12 Score=109.34 Aligned_cols=74 Identities=34% Similarity=0.592 Sum_probs=66.5
Q ss_pred CCeEeEEEEecCCC---------CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEE
Q psy12296 3 NGTLGFSIRGGREH---------TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLK 71 (433)
Q Consensus 3 ~~gLGfsI~gG~~~---------~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~ 71 (433)
+++|||+|.+|.+. ..|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. +..|.|+
T Consensus 26 ~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~ 105 (117)
T 2ehr_A 26 NVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNAGNPVVFI 105 (117)
T ss_dssp SSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTSCSSEEEE
T ss_pred CCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 47999999998753 3699999999999999999 99999999999999999999899888876 7889999
Q ss_pred EEEcC
Q psy12296 72 VRSVG 76 (433)
Q Consensus 72 V~R~g 76 (433)
|.|..
T Consensus 106 v~r~~ 110 (117)
T 2ehr_A 106 VQSLS 110 (117)
T ss_dssp ECCBS
T ss_pred EEECC
Confidence 98765
No 68
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.33 E-value=1.7e-12 Score=108.85 Aligned_cols=74 Identities=24% Similarity=0.469 Sum_probs=65.6
Q ss_pred CCeEeEEEEecCC----CCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGRE----HTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~----~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~V~R~ 75 (433)
+.+|||+|.+|.+ ...|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|.
T Consensus 25 ~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 25 CKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp SSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECC
T ss_pred CCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 4689999999765 35689999999999999999 99999999999999999999999999875 46899999875
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
.
T Consensus 105 ~ 105 (108)
T 2d92_A 105 P 105 (108)
T ss_dssp C
T ss_pred C
Confidence 3
No 69
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.33 E-value=7.9e-13 Score=108.00 Aligned_cols=74 Identities=31% Similarity=0.497 Sum_probs=67.7
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+.+|||+|.+|.+...|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..+.|+|.|++
T Consensus 15 ~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g 89 (94)
T 1vb7_A 15 PAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSS 89 (94)
T ss_dssp SSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCC
T ss_pred CCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECC
Confidence 46899999998887779999999999999999999999999999999999988889888875 478999999876
No 70
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=2.5e-12 Score=107.16 Aligned_cols=74 Identities=34% Similarity=0.657 Sum_probs=66.7
Q ss_pred CCeEeEEEEecCCC------CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREH------TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~------~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R 74 (433)
..+|||+|.+|.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..|.|+|.|
T Consensus 17 ~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R 96 (105)
T 1wha_A 17 ERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLER 96 (105)
T ss_dssp TTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCCSCEEEEEEE
T ss_pred CCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 45799999998762 4689999999999999999 99999999999999999998999999875 7889999998
Q ss_pred cC
Q psy12296 75 VG 76 (433)
Q Consensus 75 ~g 76 (433)
..
T Consensus 97 ~~ 98 (105)
T 1wha_A 97 EA 98 (105)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 71
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.33 E-value=3.8e-12 Score=106.10 Aligned_cols=75 Identities=23% Similarity=0.484 Sum_probs=66.4
Q ss_pred CCeEeEEEEecCC---CCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcCc
Q psy12296 3 NGTLGFSIRGGRE---HTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVGM 77 (433)
Q Consensus 3 ~~gLGfsI~gG~~---~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g~ 77 (433)
+.+|||+|.+|.+ ...|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. ++.|.|+|.|.+.
T Consensus 20 ~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 99 (106)
T 3axa_A 20 QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGA 99 (106)
T ss_dssp SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCS
T ss_pred CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 5789999998754 34589999999999999999 99999999999999999999888888864 7899999998763
No 72
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.33 E-value=2.5e-12 Score=108.07 Aligned_cols=74 Identities=20% Similarity=0.454 Sum_probs=65.3
Q ss_pred CCeEeEEEEecCCC--CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC----CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH--TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS----QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~--~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~----g~~V~L~V~R~ 75 (433)
+++|||+|.++.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|.
T Consensus 16 ~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~ 95 (108)
T 3cbz_A 16 YNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKS 95 (108)
T ss_dssp HCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECC
T ss_pred CCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeC
Confidence 36899999998654 5789999999999999999 99999999999999999999999988863 34699999886
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
.
T Consensus 96 ~ 96 (108)
T 3cbz_A 96 G 96 (108)
T ss_dssp C
T ss_pred C
Confidence 5
No 73
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.33 E-value=3.6e-12 Score=106.51 Aligned_cols=74 Identities=27% Similarity=0.500 Sum_probs=65.8
Q ss_pred CCeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
..+|||+|.++.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..|.|+|.|.
T Consensus 24 ~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 103 (108)
T 2jre_A 24 TSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNAGNPVRLLLIRR 103 (108)
T ss_dssp TSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHHCSEEEEEEEEC
T ss_pred CCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 46899999987653 3599999999999999999 99999999999999999988888888764 78999999987
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 104 ~ 104 (108)
T 2jre_A 104 L 104 (108)
T ss_dssp C
T ss_pred C
Confidence 6
No 74
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.33 E-value=3.1e-12 Score=110.82 Aligned_cols=76 Identities=21% Similarity=0.337 Sum_probs=68.0
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEcCcc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSVGMI 78 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~g~~ 78 (433)
..+|||+|.++.+...|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. +..|+|+|.|....
T Consensus 28 ~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 107 (129)
T 2kpk_A 28 SRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPL 107 (129)
T ss_dssp SSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSCC
T ss_pred CCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 458999999987766789999999999999999 99999999999999999999899888864 67899999997643
No 75
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=1.7e-12 Score=110.82 Aligned_cols=74 Identities=36% Similarity=0.562 Sum_probs=65.6
Q ss_pred CCeEeEEEEecCCC---CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREH---TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~---~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
.++|||+|.+|.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++ .+..|+|+|.|.+
T Consensus 35 ~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g 113 (117)
T 2fne_A 35 PDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD 113 (117)
T ss_dssp TTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECS
T ss_pred CCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 36899999998654 3589999999999999999 9999999999999999998889988887 3667999999876
No 76
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.31 E-value=6e-12 Score=104.22 Aligned_cols=73 Identities=29% Similarity=0.519 Sum_probs=64.6
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+.+|||+|.++.+ ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..++. +..++|+|.|.+
T Consensus 21 ~~glG~~~~~~~~-~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 95 (104)
T 3i4w_A 21 STGLGFNIVGGEX-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP 95 (104)
T ss_dssp TTBTSEEEEECC--CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECH
T ss_pred CCccCEEEECCCC-CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECc
Confidence 4589999998755 4699999999999999999 99999999999999999998888877765 788999999864
No 77
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.31 E-value=5.7e-12 Score=102.76 Aligned_cols=70 Identities=31% Similarity=0.569 Sum_probs=63.9
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g 76 (433)
..+|||.|.+ ..|++|..|.++|||+++||++||+|++|||+++.++.+.+++..++.++.|+|+|.|.+
T Consensus 18 ~~~~G~~l~~----~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~g~~v~l~v~R~~ 87 (93)
T 2dls_A 18 QHGFGFTVSG----DRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIKSGAYVALTLLGSS 87 (93)
T ss_dssp SSSCCEEEEC----SSSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHTSSSEEEEEEECCC
T ss_pred CCceeEEEeC----CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcCCCEEEEEEEECC
Confidence 4689999986 258999999999999999999999999999999999988888888888999999999876
No 78
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.31 E-value=4.6e-12 Score=106.73 Aligned_cols=74 Identities=24% Similarity=0.396 Sum_probs=65.8
Q ss_pred CCeEeEEEEecCCCC--CCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-----CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHT--TGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-----QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~--~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-----g~~V~L~V~R 74 (433)
+.+|||+|.+|.+.. .+++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+|+. +..++|.|.|
T Consensus 24 ~~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R 103 (109)
T 1wi4_A 24 ETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIR 103 (109)
T ss_dssp SSCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEEC
T ss_pred CCccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEe
Confidence 468999999987643 479999999999999999 99999999999999999999999999863 5678999988
Q ss_pred cC
Q psy12296 75 VG 76 (433)
Q Consensus 75 ~g 76 (433)
.+
T Consensus 104 ~~ 105 (109)
T 1wi4_A 104 SG 105 (109)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 79
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=2.6e-12 Score=107.27 Aligned_cols=75 Identities=24% Similarity=0.463 Sum_probs=66.1
Q ss_pred CCeEeEEEEecCCCCCC-eEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC------CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTTG-VFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS------QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~G-v~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~------g~~V~L~V~R 74 (433)
+.+|||+|.+|.+.... ++|..|.+++||+++| |++||+|++|||+++.++++.+++.+|+. ++.++|+|.|
T Consensus 16 ~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r 95 (103)
T 1ufx_A 16 AATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTE 95 (103)
T ss_dssp SSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECC
T ss_pred CCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEE
Confidence 46899999998876544 4999999999999999 99999999999999999999999988863 5789999988
Q ss_pred cCc
Q psy12296 75 VGM 77 (433)
Q Consensus 75 ~g~ 77 (433)
.+.
T Consensus 96 ~~~ 98 (103)
T 1ufx_A 96 FNS 98 (103)
T ss_dssp CCC
T ss_pred ccc
Confidence 763
No 80
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.31 E-value=1.2e-11 Score=100.11 Aligned_cols=71 Identities=35% Similarity=0.625 Sum_probs=60.4
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R 74 (433)
+.+|||+|.++.+ ..|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..+.+.+.|
T Consensus 13 ~~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 84 (91)
T 1g9o_A 13 PNGYGFHLHGEKG-KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVD 84 (91)
T ss_dssp TTBCCEEEEECTT-CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEC
T ss_pred CCcccEEEEecCC-CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEc
Confidence 4689999998654 469999999999999999999999999999999999999999998875 4455554443
No 81
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.31 E-value=2.8e-12 Score=110.67 Aligned_cols=73 Identities=33% Similarity=0.551 Sum_probs=65.9
Q ss_pred CeEeEEEEecCCCC---CCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecC-CCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHT---TGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIE-DATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~---~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~-~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
++|||+|.++.+.. .|++|..|.++|+|+++| |++||+|++|||+++. ++++.+++.+++. +..|.|+|.|..
T Consensus 37 ~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~r~~ 115 (128)
T 2db5_A 37 GGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLRLIVAREP 115 (128)
T ss_dssp SCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCCSEEEEEEEECC
T ss_pred CccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 69999999987653 389999999999999999 9999999999999998 8999999988874 788999999875
No 82
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=3e-12 Score=106.25 Aligned_cols=75 Identities=27% Similarity=0.441 Sum_probs=66.4
Q ss_pred CCeEeEEEEecCCC--CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcCc
Q psy12296 3 NGTLGFSIRGGREH--TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVGM 77 (433)
Q Consensus 3 ~~gLGfsI~gG~~~--~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g~ 77 (433)
..+|||+|.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++ .+..|.|+|.|.+.
T Consensus 21 ~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 99 (104)
T 2djt_A 21 YAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLS 99 (104)
T ss_dssp SSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSEEEEEECCCCC
T ss_pred CCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 36899999987654 4789999999999999999 9999999999999999998888888776 47899999988763
No 83
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.30 E-value=6.4e-12 Score=100.89 Aligned_cols=82 Identities=29% Similarity=0.354 Sum_probs=70.0
Q ss_pred eEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEE
Q psy12296 110 ITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVH 188 (433)
Q Consensus 110 v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~ 188 (433)
+.+.+.....|||.+.++.+...|++|..|.+++||+++||++||+|++|||+++. ..++.++.+.++.. ..+.|+|.
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~v~l~v~ 82 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAE-GMLHAEAQSKIRQSPSPLRLQLD 82 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEEST-TCCHHHHHHHHHTCCSSEEEEEE
T ss_pred EEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEE
Confidence 44555566789999987765556899999999999999999999999999999999 66688888888776 78999999
Q ss_pred ECCe
Q psy12296 189 RGVG 192 (433)
Q Consensus 189 R~~~ 192 (433)
|++.
T Consensus 83 R~~~ 86 (87)
T 2pa1_A 83 RITS 86 (87)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 9863
No 84
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=2.1e-12 Score=110.03 Aligned_cols=74 Identities=36% Similarity=0.593 Sum_probs=66.6
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhC--CCCCCCEEEEECCEecCCCCHHHHHHHhcCC-----cEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERS--GLLIGDQIIRINGFPIEDATHSEVLQLIHSQ-----NIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~a--GL~~GD~ILaVNG~~V~~~s~~eav~lL~~g-----~~V~L~V~R~ 75 (433)
+++|||+|.+|.+...|++|..|.++|||+++ ||++||+|++|||+++.++++.+++.+++.. ..|.|+|.|+
T Consensus 26 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~ 105 (119)
T 2cs5_A 26 NGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 105 (119)
T ss_dssp SSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECC
T ss_pred CCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcc
Confidence 35799999999887778999999999999999 8999999999999999999999999888752 4799999987
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
.
T Consensus 106 ~ 106 (119)
T 2cs5_A 106 A 106 (119)
T ss_dssp C
T ss_pred c
Confidence 5
No 85
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=7.3e-12 Score=105.05 Aligned_cols=74 Identities=23% Similarity=0.422 Sum_probs=66.2
Q ss_pred CCeEeEEEEecCCC---CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREH---TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~---~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||+|.+|.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..|.|+|.|.+
T Consensus 18 ~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 96 (110)
T 1um1_A 18 PSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKSD 96 (110)
T ss_dssp TTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 36899999997664 3589999999999999999 99999999999999999988888888875 788999999876
No 86
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.30 E-value=5.7e-12 Score=108.25 Aligned_cols=74 Identities=23% Similarity=0.477 Sum_probs=66.2
Q ss_pred CCeEeEEEEecCCCC-CCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHT-TGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~-~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
..+|||+|.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.+.++.+++.+++ .+..|.|+|.|.+
T Consensus 35 ~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 111 (124)
T 2daz_A 35 KNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNE 111 (124)
T ss_dssp SSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSEEEEEEEECT
T ss_pred CCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 468999999987653 699999999999999999 9999999999999999999988888875 4678999999876
No 87
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.30 E-value=9.2e-12 Score=103.82 Aligned_cols=74 Identities=24% Similarity=0.401 Sum_probs=64.6
Q ss_pred CCeEeEEEEecCCC------CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH------TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~------~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~ 75 (433)
+.+|||+|.++.+. ..|++|..|.++|||+ +||++||+|++|||+++.++.+.+++..+. .++.|.|+|.|.
T Consensus 18 ~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 96 (107)
T 2h2b_A 18 GFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRK 96 (107)
T ss_dssp TTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEEC
Confidence 46899999998763 4699999999999999 999999999999999999998877766665 578999999987
Q ss_pred Cc
Q psy12296 76 GM 77 (433)
Q Consensus 76 g~ 77 (433)
+.
T Consensus 97 ~~ 98 (107)
T 2h2b_A 97 KG 98 (107)
T ss_dssp SC
T ss_pred CC
Confidence 73
No 88
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=4.8e-12 Score=107.83 Aligned_cols=75 Identities=27% Similarity=0.440 Sum_probs=66.8
Q ss_pred CCeEeEEEEecCCCCC-CeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcCc
Q psy12296 3 NGTLGFSIRGGREHTT-GVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVGM 77 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~-Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g~ 77 (433)
+.+|||.|.++.+... +++|..|.++|+|+++| |++||+|++|||+++.+.++.+++.+++. +..|+|+|.|.+.
T Consensus 26 ~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 103 (117)
T 1v62_A 26 GSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEILPVPQ 103 (117)
T ss_dssp TCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSEEEEEECCBTT
T ss_pred CCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCC
Confidence 4689999999766444 49999999999999999 99999999999999999999999999975 7899999998763
No 89
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=5.5e-12 Score=105.42 Aligned_cols=74 Identities=24% Similarity=0.491 Sum_probs=64.9
Q ss_pred CCeEeEEEEe---cCCC---CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEE
Q psy12296 3 NGTLGFSIRG---GREH---TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~g---G~~~---~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R 74 (433)
..+|||+|.+ |.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++ .+..|.|+|.|
T Consensus 19 ~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R 98 (107)
T 1wf8_A 19 EDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGR 98 (107)
T ss_dssp TTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEe
Confidence 4689999998 4432 3589999999999999999 9999999999999999999888888776 47899999998
Q ss_pred cC
Q psy12296 75 VG 76 (433)
Q Consensus 75 ~g 76 (433)
..
T Consensus 99 ~~ 100 (107)
T 1wf8_A 99 EK 100 (107)
T ss_dssp EC
T ss_pred CC
Confidence 76
No 90
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.29 E-value=8.8e-12 Score=101.43 Aligned_cols=73 Identities=30% Similarity=0.581 Sum_probs=63.9
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||+|.++ +...+++|..|.++|||+++| |++||+|++|||+++.+.++.++..+++. +..|+|+|.+..
T Consensus 14 ~~~lG~~i~~~-~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 14 REPLGATIKKD-EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPGS 88 (93)
T ss_dssp SSCCCEEEEEC-TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEEEECC-
T ss_pred CCCccEEEEec-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 46899999985 445789999999999999999 99999999999999999999999999964 568899988643
No 91
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=4.5e-12 Score=108.20 Aligned_cols=74 Identities=34% Similarity=0.502 Sum_probs=65.0
Q ss_pred CCeEeEEEEecCCCCCC-eEEEEeCCCCHhHhC-CCCCCCEEEEECCEecCCCCHHHHHHHhcC-----CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTTG-VFVSNVEPKSEAERS-GLLIGDQIIRINGFPIEDATHSEVLQLIHS-----QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~G-v~Vs~V~pgSpA~~a-GL~~GD~ILaVNG~~V~~~s~~eav~lL~~-----g~~V~L~V~R~ 75 (433)
.++|||+|.+|.+...+ ++|..|.++|||+++ ||++||+|++|||+++.++++.+++.+++. +..|+|+|.|.
T Consensus 27 ~~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 27 EGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp CSCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CCccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 46899999998876544 999999999999999 799999999999999999999888887752 78899999885
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
.
T Consensus 107 ~ 107 (118)
T 1v6b_A 107 P 107 (118)
T ss_dssp C
T ss_pred C
Confidence 4
No 92
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=1.3e-12 Score=108.01 Aligned_cols=73 Identities=38% Similarity=0.608 Sum_probs=66.5
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
.+|||+|.++.+...|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..|.|+|.|.+
T Consensus 22 ~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 96 (103)
T 1wfv_A 22 KGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRGT 96 (103)
T ss_dssp TSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEECEEEECTT
T ss_pred CcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 57999999987776799999999999999999 99999999999999999988888888764 789999999876
No 93
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.29 E-value=1.1e-11 Score=113.80 Aligned_cols=71 Identities=35% Similarity=0.649 Sum_probs=64.5
Q ss_pred CCeEeEEEEecCC--------CCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEE
Q psy12296 3 NGTLGFSIRGGRE--------HTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVR 73 (433)
Q Consensus 3 ~~gLGfsI~gG~~--------~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~ 73 (433)
+++|||+|.||.+ ...|++|..|.++|||++ ||++||+|++|||+++.++++.+++.+++. +..|.|+|.
T Consensus 1 ~~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 1 SPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CCcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 5789999999874 357999999999999999 999999999999999999999998888864 678999999
Q ss_pred E
Q psy12296 74 S 74 (433)
Q Consensus 74 R 74 (433)
|
T Consensus 80 r 80 (195)
T 2qbw_A 80 R 80 (195)
T ss_dssp E
T ss_pred E
Confidence 8
No 94
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1.2e-11 Score=100.41 Aligned_cols=70 Identities=30% Similarity=0.359 Sum_probs=62.6
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||.+.+. .|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..+.|+|.|.+
T Consensus 13 ~~g~G~~l~~~----~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 83 (91)
T 2f5y_A 13 KDGFGFTICCD----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMV 83 (91)
T ss_dssp TTBTSEEEECS----SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEECC
T ss_pred CCCccEEEecC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 36799999862 47999999999999999999999999999999999988888888875 678999999876
No 95
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.28 E-value=1.3e-11 Score=101.76 Aligned_cols=71 Identities=20% Similarity=0.355 Sum_probs=62.8
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~ 75 (433)
.++|||+|.++ ....+||+.|.++|+|++.| |++||+|++|||+++.+++|.+++++|++ |..++|++.+.
T Consensus 15 ~~~LG~tI~~~--g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 15 EDSLGLTITDN--GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEP 89 (95)
T ss_dssp SSCCCEEEECS--SSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred CCCceEEEEcC--CCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECc
Confidence 47999999963 23459999999999999999 99999999999999999999999999985 67888888753
No 96
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.28 E-value=1.2e-11 Score=108.68 Aligned_cols=73 Identities=33% Similarity=0.596 Sum_probs=65.9
Q ss_pred CeEeEEEEecCC------------CCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEE
Q psy12296 4 GTLGFSIRGGRE------------HTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIIS 69 (433)
Q Consensus 4 ~gLGfsI~gG~~------------~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~ 69 (433)
.+|||+|.+|.+ ...|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. |+.|.
T Consensus 38 ~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~ 117 (139)
T 2vz5_A 38 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVR 117 (139)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEE
T ss_pred ccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEE
Confidence 379999998765 2479999999999999999999999999999999999888899998874 68899
Q ss_pred EEEEEcC
Q psy12296 70 LKVRSVG 76 (433)
Q Consensus 70 L~V~R~g 76 (433)
|+|.|++
T Consensus 118 l~v~R~g 124 (139)
T 2vz5_A 118 LLVTRQS 124 (139)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999987
No 97
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=2.1e-12 Score=108.62 Aligned_cols=74 Identities=34% Similarity=0.561 Sum_probs=66.2
Q ss_pred CCeEeEEEEecCC---------CCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEE
Q psy12296 3 NGTLGFSIRGGRE---------HTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLK 71 (433)
Q Consensus 3 ~~gLGfsI~gG~~---------~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~ 71 (433)
+++|||+|.+|.+ ...|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. +..|.|+
T Consensus 20 ~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~g~~v~l~ 99 (111)
T 1uju_A 20 GERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVL 99 (111)
T ss_dssp TCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSSCSSEEEEC
T ss_pred CCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 4799999999873 34689999999999999999 99999999999999999999999998875 6889999
Q ss_pred EEEcC
Q psy12296 72 VRSVG 76 (433)
Q Consensus 72 V~R~g 76 (433)
|.|..
T Consensus 100 v~r~~ 104 (111)
T 1uju_A 100 VCDGF 104 (111)
T ss_dssp CCCCC
T ss_pred EEECC
Confidence 98764
No 98
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.28 E-value=4.3e-12 Score=105.26 Aligned_cols=73 Identities=34% Similarity=0.613 Sum_probs=64.7
Q ss_pred CCeEeEEEEecCC--------CCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEE
Q psy12296 3 NGTLGFSIRGGRE--------HTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVR 73 (433)
Q Consensus 3 ~~gLGfsI~gG~~--------~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~ 73 (433)
+.+|||+|.+|.+ ...|++|..|.++|||++ ||++||+|++|||+++.++++.+++..++. +..|.|+|.
T Consensus 20 ~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~ 98 (103)
T 1n7t_A 20 DPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 98 (103)
T ss_dssp SSCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CCCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhhcCCCeEEEEEE
Confidence 4589999999775 457999999999999999 999999999999999999988888877764 789999998
Q ss_pred EcC
Q psy12296 74 SVG 76 (433)
Q Consensus 74 R~g 76 (433)
|+.
T Consensus 99 R~~ 101 (103)
T 1n7t_A 99 REV 101 (103)
T ss_dssp CCC
T ss_pred ecC
Confidence 854
No 99
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.28 E-value=2.5e-12 Score=109.10 Aligned_cols=74 Identities=32% Similarity=0.589 Sum_probs=65.8
Q ss_pred CCeEeEEEEecCCC---CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecC-CCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREH---TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIE-DATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~---~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~-~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
+++|||+|.++.+. ..|++|..|.++|||+++| |++||+|++|||+++. ++++.+++.+++ .+..|.|+|.|.+
T Consensus 31 ~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~R~~ 110 (117)
T 2o2t_A 31 SGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIARGS 110 (117)
T ss_dssp SSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCCSEEEEEEESSC
T ss_pred CCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCEEEEEEEeCC
Confidence 47899999987643 3589999999999999999 9999999999999998 888888888886 4789999999876
No 100
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1.5e-11 Score=106.19 Aligned_cols=74 Identities=42% Similarity=0.737 Sum_probs=67.5
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcCc
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVGM 77 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g~ 77 (433)
++|||.+.++.+...|++|..|.++|||+++||++||+|++|||+++.++.+.+++..++.+..+.|+|.|++.
T Consensus 32 ~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~v~l~v~R~g~ 105 (128)
T 1uf1_A 32 RSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSRHLILTVKDVGR 105 (128)
T ss_dssp CCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSEEEEEEECCSC
T ss_pred CccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCeEEEEEEECCc
Confidence 57999999876556799999999999999999999999999999999999888889999888899999999874
No 101
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=2.7e-12 Score=106.23 Aligned_cols=72 Identities=35% Similarity=0.563 Sum_probs=64.8
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhC-CCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERS-GLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~a-GL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
.+|||+|.+|.+...+++|..|.++|||+++ ||++||+|++|||+++.++ +.+++.+++. +..|.|+|.|.+
T Consensus 21 ~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~l~v~R~~ 94 (100)
T 2edp_A 21 APWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILKLIVRRRN 94 (100)
T ss_dssp SCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCEEEEEECC
T ss_pred CCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEEEEEEeCC
Confidence 5899999998887778999999999999999 8999999999999999997 6778888765 678999999976
No 102
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.27 E-value=9.2e-12 Score=101.40 Aligned_cols=73 Identities=30% Similarity=0.528 Sum_probs=62.8
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||.+.++.+. .|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..+.+++.|.+
T Consensus 15 ~~~~G~~l~~~~~~-~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~r~~ 88 (95)
T 3r68_A 15 SNGYGFYLRAGPEQ-KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKE 88 (95)
T ss_dssp TTBCSCEEEEC--C-CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEECC
T ss_pred CCcccEEEEecCCC-CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEECCc
Confidence 46899999985443 69999999999999999999999999999999999999999998886 677777777654
No 103
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.27 E-value=3.6e-12 Score=103.36 Aligned_cols=73 Identities=27% Similarity=0.388 Sum_probs=62.5
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
.++|||+|.++.+ ..|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..|.|+|.|.+
T Consensus 13 ~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 86 (91)
T 2vsp_A 13 ENGYGFHLNAIRG-LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKK 86 (91)
T ss_dssp TTBTSCCCBCCTT-CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEEEEC--
T ss_pred CCcccEEEEeccC-CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeCC
Confidence 3589999987433 468999999999999999999999999999999998888899999876 789999999866
No 104
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.27 E-value=1.3e-11 Score=103.53 Aligned_cols=74 Identities=31% Similarity=0.536 Sum_probs=65.2
Q ss_pred CCeEeEEEEecCCC---CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH---TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~---~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~ 75 (433)
..+|||+|.++.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..|.|+|.|.
T Consensus 21 ~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 100 (111)
T 2koj_A 21 TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQ 100 (111)
T ss_dssp TTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEEC
T ss_pred CCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 46899999986532 2689999999999999999 99999999999999999988888888863 78899999987
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 101 ~ 101 (111)
T 2koj_A 101 E 101 (111)
T ss_dssp C
T ss_pred C
Confidence 6
No 105
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.27 E-value=5.7e-12 Score=107.31 Aligned_cols=74 Identities=26% Similarity=0.453 Sum_probs=64.8
Q ss_pred CCeEeEEEEecCCC-CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREH-TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~V~R~g 76 (433)
..+|||+|.++.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..+.++|.|.+
T Consensus 26 ~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~~ 103 (119)
T 1x6d_A 26 GAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKL 103 (119)
T ss_dssp TSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEECC
T ss_pred CCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 57999999998764 5799999999999999999 99999999999999999999999888864 455668888876
No 106
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.27 E-value=2.6e-12 Score=111.12 Aligned_cols=74 Identities=23% Similarity=0.478 Sum_probs=66.1
Q ss_pred CCeEeEEEEecCCC----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC--------CcEEE
Q psy12296 3 NGTLGFSIRGGREH----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS--------QNIIS 69 (433)
Q Consensus 3 ~~gLGfsI~gG~~~----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~--------g~~V~ 69 (433)
..+|||+|.++.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+. +..|+
T Consensus 36 ~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~ 115 (127)
T 1wg6_A 36 SAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQ 115 (127)
T ss_dssp TTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEE
Confidence 46899999987653 3589999999999999999 99999999999999999999999988873 67899
Q ss_pred EEEEEcC
Q psy12296 70 LKVRSVG 76 (433)
Q Consensus 70 L~V~R~g 76 (433)
|+|.|..
T Consensus 116 l~v~R~~ 122 (127)
T 1wg6_A 116 LVILRRS 122 (127)
T ss_dssp EEEEECS
T ss_pred EEEEeCC
Confidence 9999876
No 107
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=2.2e-11 Score=100.52 Aligned_cols=84 Identities=33% Similarity=0.522 Sum_probs=72.6
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLV 187 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V 187 (433)
..+.|.+.....|||.+..+.....|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.+..+.|+|
T Consensus 12 ~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~~~~~~~v~l~v 90 (100)
T 2eeh_A 12 HSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLE-STTMGSAVKVLTSSSRLHMMV 90 (100)
T ss_dssp CCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECS-SCCHHHHHHHHHSCSSEEEEE
T ss_pred EEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHhhcCCCEEEEEE
Confidence 4456666666779999987655457999999999999999999999999999999999 555899999998889999999
Q ss_pred EECCe
Q psy12296 188 HRGVG 192 (433)
Q Consensus 188 ~R~~~ 192 (433)
.|++.
T Consensus 91 ~R~g~ 95 (100)
T 2eeh_A 91 RRMGS 95 (100)
T ss_dssp EECSC
T ss_pred EECCc
Confidence 99874
No 108
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.27 E-value=9.7e-12 Score=104.47 Aligned_cols=72 Identities=33% Similarity=0.588 Sum_probs=64.6
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+.+|||.|.++.+ .|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. ++.|.|+|.|.+
T Consensus 25 ~~~lG~~l~~~~~--~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 98 (111)
T 2dlu_A 25 GSGLGFGIVGGKT--SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDP 98 (111)
T ss_dssp SSCCCEEEECCSS--SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEEEEEESC
T ss_pred CCccCEEEeccCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 4689999997554 589999999999999999 99999999999999999988888888874 788999999876
No 109
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.27 E-value=7e-12 Score=105.86 Aligned_cols=73 Identities=32% Similarity=0.594 Sum_probs=66.1
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~ 75 (433)
..+|||+|.++.+...|++|..|.++|+|+++||++||+|++|||+++.++.+.+++.+++.+..+.|+|.|.
T Consensus 26 ~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~v~l~v~r~ 98 (114)
T 1x5n_A 26 SRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSSRSLTISIVAA 98 (114)
T ss_dssp SCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHCSSEEEEECSS
T ss_pred CCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCeEEEEEEcC
Confidence 4689999999877778999999999999999999999999999999999998877888887667899999887
No 110
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.27 E-value=1.3e-11 Score=98.46 Aligned_cols=76 Identities=21% Similarity=0.277 Sum_probs=66.0
Q ss_pred CCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECC
Q psy12296 115 PPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGV 191 (433)
Q Consensus 115 ~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~ 191 (433)
.....|||.+.++.+...|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.. ..+.|+|.|++
T Consensus 8 ~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l~v~R~~ 84 (85)
T 1rgw_A 8 TGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTD-TMTHLEAQNKIKSASYNLSLTLQKSK 84 (85)
T ss_dssp CCSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECT-TCCHHHHHHHHTTCSSCEEEEEESCC
T ss_pred eCCCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CcCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 345679999988766566899999999999999999999999999999999 66888999888754 67999999875
No 111
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.26 E-value=7.9e-12 Score=102.77 Aligned_cols=74 Identities=36% Similarity=0.452 Sum_probs=64.0
Q ss_pred CCeEeEEEEecCCC-------CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREH-------TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~-------~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R 74 (433)
+.+|||+|.++... ..|++|..|.++|||+++||++||+|++|||+++.++++.++..+++ .++.+.|+|.|
T Consensus 12 ~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r 91 (99)
T 3khf_A 12 GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSGNKISLRTTA 91 (99)
T ss_dssp CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEC
T ss_pred CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCEEEEEEEE
Confidence 56899999975431 12678999999999999999999999999999999988888888886 58899999998
Q ss_pred cC
Q psy12296 75 VG 76 (433)
Q Consensus 75 ~g 76 (433)
.+
T Consensus 92 ~~ 93 (99)
T 3khf_A 92 LE 93 (99)
T ss_dssp SC
T ss_pred CC
Confidence 76
No 112
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=5.4e-12 Score=105.53 Aligned_cols=74 Identities=28% Similarity=0.610 Sum_probs=65.3
Q ss_pred CCeEeEEEE-----ecCCC---CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEE
Q psy12296 3 NGTLGFSIR-----GGREH---TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKV 72 (433)
Q Consensus 3 ~~gLGfsI~-----gG~~~---~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V 72 (433)
+.+|||+|. +|.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++ .+..|.|+|
T Consensus 19 ~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v 98 (108)
T 1q7x_A 19 DNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLL 98 (108)
T ss_dssp SCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHTTSEEEEEE
T ss_pred CCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 468999999 77664 4689999999999999999 9999999999999999888888887776 478999999
Q ss_pred EEcC
Q psy12296 73 RSVG 76 (433)
Q Consensus 73 ~R~g 76 (433)
.|.+
T Consensus 99 ~R~~ 102 (108)
T 1q7x_A 99 EKGQ 102 (108)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 9876
No 113
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=1.7e-11 Score=101.95 Aligned_cols=83 Identities=34% Similarity=0.469 Sum_probs=73.3
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLV 187 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V 187 (433)
..+.|.+.....|||.+.++.....|++|..|.+++||+++||++||+|++|||+++. ..++.++++.++.+..+.|+|
T Consensus 17 ~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~v~l~v 95 (104)
T 1wi2_A 17 RIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQ-DIEHSKAVEILKTAREISMRV 95 (104)
T ss_dssp EEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECS-SCCHHHHHHHHHHSSSEEEEE
T ss_pred EEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHhCCCEEEEEE
Confidence 4567777776899999988766567999999999999999999999999999999999 677999999988888999999
Q ss_pred EECC
Q psy12296 188 HRGV 191 (433)
Q Consensus 188 ~R~~ 191 (433)
.|+.
T Consensus 96 ~r~~ 99 (104)
T 1wi2_A 96 RFFS 99 (104)
T ss_dssp ECCC
T ss_pred EECC
Confidence 9874
No 114
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.26 E-value=2.1e-11 Score=99.27 Aligned_cols=74 Identities=27% Similarity=0.503 Sum_probs=64.7
Q ss_pred CCeEeEEEEecCC----CCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGRE----HTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~----~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||++.++.+ ...|++|..|.++|+|+++| |++||+|++|||+++.++++.++..+++. +..|.|+|.|.+
T Consensus 14 ~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~g 93 (97)
T 2iwn_A 14 VQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 93 (97)
T ss_dssp TTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEEE
T ss_pred CCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 4579999998643 35699999999999999999 99999999999999999988888877764 788999998876
No 115
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.26 E-value=5.4e-12 Score=109.14 Aligned_cols=74 Identities=26% Similarity=0.566 Sum_probs=65.1
Q ss_pred CCeEeEEEEecCC---------CCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEE
Q psy12296 3 NGTLGFSIRGGRE---------HTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLK 71 (433)
Q Consensus 3 ~~gLGfsI~gG~~---------~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~ 71 (433)
+++|||+|.++.+ ...|++|..|.++|+|+++| |++||+|++|||+++.+.++.+++.+++ .+..|.|+
T Consensus 41 ~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 120 (128)
T 1nf3_C 41 EKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIIT 120 (128)
T ss_dssp TSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHTTTSEEEE
T ss_pred CCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 4789999998753 22589999999999999999 9999999999999999999999998886 46779999
Q ss_pred EEEcC
Q psy12296 72 VRSVG 76 (433)
Q Consensus 72 V~R~g 76 (433)
|.|.+
T Consensus 121 v~r~~ 125 (128)
T 1nf3_C 121 VRPAN 125 (128)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 99876
No 116
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.26 E-value=5.9e-12 Score=106.16 Aligned_cols=75 Identities=23% Similarity=0.438 Sum_probs=65.5
Q ss_pred CCeEeEEEEe---cCC---CCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEE
Q psy12296 3 NGTLGFSIRG---GRE---HTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~g---G~~---~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R 74 (433)
..+|||+|.+ |.+ ...|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. ++.|.|+|.|
T Consensus 14 ~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R 93 (113)
T 2g5m_B 14 SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGR 93 (113)
T ss_dssp SSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSCSSCEEEEEE
T ss_pred CCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEe
Confidence 4689999998 443 24689999999999999999 99999999999999999988888877764 7889999999
Q ss_pred cCc
Q psy12296 75 VGM 77 (433)
Q Consensus 75 ~g~ 77 (433)
.+.
T Consensus 94 ~~~ 96 (113)
T 2g5m_B 94 ERP 96 (113)
T ss_dssp CCC
T ss_pred CCC
Confidence 773
No 117
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.26 E-value=8.9e-12 Score=103.73 Aligned_cols=73 Identities=34% Similarity=0.582 Sum_probs=64.7
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
+++|||.+..+.+ ..|++|..|.++|||+++||++||+|++|||+++.++++.++..+++ .+..|+|+|.|.+
T Consensus 12 ~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 85 (106)
T 3ngh_A 12 GQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDGD 85 (106)
T ss_dssp TCCCCCEEECCTT-CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEEECHH
T ss_pred CCeeCEEEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEECC
Confidence 4689999997543 46899999999999999999999999999999999999888888885 4789999999876
No 118
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=5.5e-12 Score=107.16 Aligned_cols=73 Identities=30% Similarity=0.531 Sum_probs=64.9
Q ss_pred CCeEeEEEEecCCC------CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREH------TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~------~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~ 75 (433)
+.+|||+|.+|.+. ..|++|..|.++|+|+ +||++||+|++|||+++.++++.+++.+++ .++.|.|+|.|.
T Consensus 25 ~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 103 (117)
T 2csj_A 25 KRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKSGKIAAIVVKRP 103 (117)
T ss_dssp SSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEEC
Confidence 47999999998763 4689999999999997 789999999999999999999988888876 478999999986
Q ss_pred C
Q psy12296 76 G 76 (433)
Q Consensus 76 g 76 (433)
+
T Consensus 104 ~ 104 (117)
T 2csj_A 104 R 104 (117)
T ss_dssp E
T ss_pred C
Confidence 5
No 119
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.26 E-value=1.2e-11 Score=112.49 Aligned_cols=73 Identities=23% Similarity=0.458 Sum_probs=64.5
Q ss_pred CCeEeEEEEe---cCCC---CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEE
Q psy12296 3 NGTLGFSIRG---GREH---TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~g---G~~~---~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R 74 (433)
.++|||+|.+ |.+. ..|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+. +..|+|+|.|
T Consensus 90 ~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~v~L~V~R 169 (170)
T 3egg_C 90 SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGR 169 (170)
T ss_dssp TTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEe
Confidence 3689999999 3332 3579999999999999999 99999999999999999999999999874 7899999987
Q ss_pred c
Q psy12296 75 V 75 (433)
Q Consensus 75 ~ 75 (433)
+
T Consensus 170 ~ 170 (170)
T 3egg_C 170 E 170 (170)
T ss_dssp C
T ss_pred C
Confidence 4
No 120
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.26 E-value=5e-12 Score=106.99 Aligned_cols=74 Identities=28% Similarity=0.540 Sum_probs=66.4
Q ss_pred CCeEeEEEEecCCCC-CCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHT-TGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~-~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||+|.++.+.. .|++|..|.++|+|+++| |++||+|++|||+++.++++.+++.+++. +..|.|+|.|.+
T Consensus 27 ~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 103 (116)
T 2dm8_A 27 RSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKVRLVVYRDE 103 (116)
T ss_dssp SSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEEEEEEECCS
T ss_pred CCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 468999999877654 599999999999999999 99999999999999999988888888874 688999999876
No 121
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.26 E-value=1.6e-11 Score=102.29 Aligned_cols=74 Identities=36% Similarity=0.578 Sum_probs=63.6
Q ss_pred CCeEeEEEEecCCC------------CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEE
Q psy12296 3 NGTLGFSIRGGREH------------TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIIS 69 (433)
Q Consensus 3 ~~gLGfsI~gG~~~------------~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~ 69 (433)
..+|||+|.++.+. ..+++|..|.++|||+++||++||+|++|||+++.++++.++..+++. ++.+.
T Consensus 16 ~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 95 (107)
T 3qe1_A 16 ESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELI 95 (107)
T ss_dssp TTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHCSSEEE
T ss_pred CCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 35899999987443 234579999999999999999999999999999999998999888875 78999
Q ss_pred EEEEEcC
Q psy12296 70 LKVRSVG 76 (433)
Q Consensus 70 L~V~R~g 76 (433)
|+|.|..
T Consensus 96 l~v~r~~ 102 (107)
T 3qe1_A 96 LTVLSVE 102 (107)
T ss_dssp EEEECSS
T ss_pred EEEEcCC
Confidence 9998865
No 122
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.25 E-value=2.4e-12 Score=106.97 Aligned_cols=75 Identities=27% Similarity=0.493 Sum_probs=67.9
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcCc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVGM 77 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g~ 77 (433)
+.+|||+|.++.+...+++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..+.|+|.|++.
T Consensus 14 ~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 14 PAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET 89 (103)
T ss_dssp SSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCTT
T ss_pred CCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCe
Confidence 46899999998876678999999999999999999999999999999999888899988876 7899999998773
No 123
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.25 E-value=1.4e-11 Score=99.30 Aligned_cols=77 Identities=18% Similarity=0.236 Sum_probs=66.6
Q ss_pred CCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCe
Q psy12296 115 PPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVG 192 (433)
Q Consensus 115 ~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~ 192 (433)
.....|||.+.++.+...|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.. ..+.|+|.|++.
T Consensus 10 ~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~~~~~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 10 EGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAG-SLTHIEAQNKIRACGERLSLGLSRAIT 87 (89)
T ss_dssp ESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGG-GCCHHHHHHHHHTCTTEEEEEEEEECC
T ss_pred cCCCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCEEEEEEEeCCC
Confidence 345789999987665566899999999999999999999999999999999 67889998888764 789999998763
No 124
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=1.4e-11 Score=99.57 Aligned_cols=72 Identities=18% Similarity=0.370 Sum_probs=62.4
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHh-CCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAER-SGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~-aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||+|.++. ..+++|..|.++|||++ +||++||+|++|||+++.++++.++..+++. ...|+|+|.|.+
T Consensus 12 ~~~lG~~i~~~~--~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 85 (88)
T 1kwa_A 12 DEPMGITLKMNE--LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY 85 (88)
T ss_dssp SSCCCEEEECSC--GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEEECCC
T ss_pred CCceeEEEEeCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEECCc
Confidence 478999999732 35799999999999999 7899999999999999999999999999974 348889888754
No 125
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.25 E-value=1.1e-11 Score=107.01 Aligned_cols=75 Identities=23% Similarity=0.481 Sum_probs=67.0
Q ss_pred CCeEeEEEEecCC-----CCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGRE-----HTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~-----~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
+.+|||+|.++.+ ...|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++. +..|.|+|.|.
T Consensus 26 ~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 105 (129)
T 2dmz_A 26 GQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNAGQVVHLTLVRR 105 (129)
T ss_dssp TCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHCCSSEEEEEEEE
T ss_pred CCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 5789999998765 34689999999999999999 99999999999999999988999888874 78899999997
Q ss_pred Cc
Q psy12296 76 GM 77 (433)
Q Consensus 76 g~ 77 (433)
+.
T Consensus 106 ~~ 107 (129)
T 2dmz_A 106 KT 107 (129)
T ss_dssp SS
T ss_pred Cc
Confidence 73
No 126
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.25 E-value=1.6e-11 Score=98.59 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=66.5
Q ss_pred CCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCe
Q psy12296 115 PPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVG 192 (433)
Q Consensus 115 ~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~ 192 (433)
.....|||.+.++.+...+++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.. ..+.|+|.|++.
T Consensus 10 ~~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~~~~~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 10 VGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQ-GMTHLEAQNKIKGCTGSLNMTLQRESD 87 (88)
T ss_dssp ESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECT-TCCHHHHHHHHHTCCSEEEEEEECCCC
T ss_pred cCCCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 445689999988766566899999999999999999999999999999999 66688888888754 789999999863
No 127
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=1.2e-11 Score=104.64 Aligned_cols=74 Identities=24% Similarity=0.420 Sum_probs=64.8
Q ss_pred CCeEeEEEEecCCCC-------CCeEEEEeCCCCHhHh-CCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHT-------TGVFVSNVEPKSEAER-SGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVR 73 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~-------~Gv~Vs~V~pgSpA~~-aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~ 73 (433)
+++|||+|.++.+.. .+++|..|.++|||++ +||++||+|++|||+++.++++.++..+++. +..|.|+|.
T Consensus 21 ~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~ 100 (114)
T 1uew_A 21 NEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRII 100 (114)
T ss_dssp TSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHHTTTEEEEEEC
T ss_pred CCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 468999999865432 2679999999999999 9999999999999999999988888888864 789999999
Q ss_pred EcC
Q psy12296 74 SVG 76 (433)
Q Consensus 74 R~g 76 (433)
|.+
T Consensus 101 r~~ 103 (114)
T 1uew_A 101 PQE 103 (114)
T ss_dssp CCS
T ss_pred eCC
Confidence 876
No 128
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.25 E-value=3.1e-11 Score=103.32 Aligned_cols=83 Identities=24% Similarity=0.432 Sum_probs=72.1
Q ss_pred cceEEeeCCCCCCCceeecCC---CCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-Ce
Q psy12296 108 VPITLEVPPHGKLGCGICKGP---QWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CL 182 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~---~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~ 182 (433)
..+.+.+.....|||.+.++. ....|++|..|.++|+|+++| |++||+|++|||+++. .+++.+++.+++.. ..
T Consensus 26 ~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~-~~~~~~~~~~l~~~~~~ 104 (118)
T 3b76_A 26 KVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELT-EVSRSEAVALLKRTSSS 104 (118)
T ss_dssp EEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGG-GSCHHHHHHHHHSCCSE
T ss_pred EEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCe
Confidence 445666666789999999875 335689999999999999999 9999999999999999 99999999999876 78
Q ss_pred EEEEEEECC
Q psy12296 183 LELLVHRGV 191 (433)
Q Consensus 183 v~L~V~R~~ 191 (433)
+.|+|.|..
T Consensus 105 v~L~v~R~~ 113 (118)
T 3b76_A 105 IVLKALEVK 113 (118)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEECC
Confidence 999998864
No 129
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.25 E-value=2.6e-11 Score=104.59 Aligned_cols=72 Identities=25% Similarity=0.500 Sum_probs=64.0
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g 76 (433)
+.+|||.+.++.+ .|++|..|.++|||+++||++||+|++|||+++.++++.++..++. .+..|+|+|.|.+
T Consensus 38 ~~~lG~~l~~~~~--~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 38 GDSVGLRLAGGND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 112 (124)
T ss_dssp SSCCCEEEEECTT--SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECH
T ss_pred CCceeEEEecCCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 4689999998554 6999999999999999999999999999999999998888877665 4789999999876
No 130
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.24 E-value=1.2e-11 Score=101.45 Aligned_cols=73 Identities=30% Similarity=0.522 Sum_probs=63.1
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~V~R~g 76 (433)
..+|||+|.++.+ ..|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..+.|+|.|++
T Consensus 19 ~~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g 93 (98)
T 2jxo_A 19 PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRET 93 (98)
T ss_dssp TTCCCEEEECCCS-SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCHHH
T ss_pred CCcccEEEEecCC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCc
Confidence 3689999997543 459999999999999999999999999999999999888888888875 566778888765
No 131
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.24 E-value=2.2e-11 Score=99.91 Aligned_cols=71 Identities=21% Similarity=0.300 Sum_probs=62.1
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||.+.+ ...|++|..|.++|||+++| |++||+|++|||+++.+.++.++..+++. +..|.|+|.|..
T Consensus 19 ~~glG~~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 19 GKELGLSLSP---NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSMEVTRPK 91 (96)
T ss_dssp TBCCCEEEEE---CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCC
T ss_pred CCCccEEEEe---CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEEeCC
Confidence 4589999986 23689999999999999999 99999999999999999888888877765 678999998854
No 132
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.23 E-value=6.8e-12 Score=121.79 Aligned_cols=75 Identities=32% Similarity=0.571 Sum_probs=68.8
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHh-CCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcCc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAER-SGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVGM 77 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~-aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g~ 77 (433)
+++|||+|.+|.+...|++|..|.++|||++ +||++||+|++|||++|.++++.+++.+++. ++.|+|+|.|...
T Consensus 88 ~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 88 AGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKE 164 (263)
T ss_dssp TCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCCEEEECCSS
T ss_pred CCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEeCcc
Confidence 4799999999998888999999999999999 6899999999999999999999999998875 7789999998654
No 133
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.22 E-value=2.9e-11 Score=97.60 Aligned_cols=82 Identities=28% Similarity=0.307 Sum_probs=70.4
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhc-CCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDA-GLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~a-GL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
..+.+.+.....|||.+.++.+...|++|..|.++|||+++ ||++||+|++|||+++. ..++.+++..++.. ..+.|
T Consensus 6 ~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~-~~~~~~~~~~~~~~~~~v~l 84 (90)
T 1qav_A 6 RRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLS-SATHDEAVQALKKTGKEVVL 84 (90)
T ss_dssp EEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECT-TCCHHHHHHHHHTCCSEEEE
T ss_pred EEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEE
Confidence 45666676778999999876554568999999999999999 89999999999999999 77899999998865 78999
Q ss_pred EEEEC
Q psy12296 186 LVHRG 190 (433)
Q Consensus 186 ~V~R~ 190 (433)
+|.|-
T Consensus 85 ~v~r~ 89 (90)
T 1qav_A 85 EVKYM 89 (90)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99873
No 134
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.22 E-value=1.8e-11 Score=99.85 Aligned_cols=83 Identities=28% Similarity=0.368 Sum_probs=70.8
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLV 187 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V 187 (433)
.+.+.+.....|||.+.++.+...|++|..|.+++||+++||++||+|++|||+++. ..++.++++.++.. ..+.|+|
T Consensus 7 ~~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~v~l~v 85 (94)
T 1vb7_A 7 GLTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAE-NMLHAEAQSKIRQSASPLRLQL 85 (94)
T ss_dssp CEEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECT-TCCHHHHHHHHHTCCSSEEEEE
T ss_pred EEEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCcEEEEE
Confidence 345555666789999987666567899999999999999999999999999999999 66778888888765 7899999
Q ss_pred EECCe
Q psy12296 188 HRGVG 192 (433)
Q Consensus 188 ~R~~~ 192 (433)
.|++.
T Consensus 86 ~R~g~ 90 (94)
T 1vb7_A 86 DRSSG 90 (94)
T ss_dssp ECCCC
T ss_pred EECCc
Confidence 99874
No 135
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.22 E-value=4.1e-11 Score=96.32 Aligned_cols=74 Identities=16% Similarity=0.219 Sum_probs=65.0
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
..+.|.++..+.|||.+.+ | +|..+.+++||+++||++||+|++|||+++. +.+|++++++|+.. ..++|+
T Consensus 6 r~v~l~k~~~g~~Gf~i~~------g-~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~-~~~~~evv~llr~~g~~V~L~ 77 (82)
T 1r6j_A 6 RTITMHKDSTGHVGFIFKN------G-KITSIVKDSSAARNGLLTEHNICEINGQNVI-GLKDSQIADILSTSGTVVTIT 77 (82)
T ss_dssp EEEEEECCTTSCCCEEEET------T-EEEEECTTSHHHHHTCCSSEEEEEETTEECT-TCCHHHHHHHHHHSCSEEEEE
T ss_pred EEEEEEECCCCCeEEEEEC------C-EEEEecCCCHHHHcCCCCCCEEEEECCEEcC-CCCHHHHHHHHhcCCCEEEEE
Confidence 4577788877889999864 3 4889999999999999999999999999999 99999999999865 789998
Q ss_pred EEE
Q psy12296 187 VHR 189 (433)
Q Consensus 187 V~R 189 (433)
|..
T Consensus 78 v~p 80 (82)
T 1r6j_A 78 IMP 80 (82)
T ss_dssp EEE
T ss_pred EEe
Confidence 864
No 136
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.22 E-value=1.8e-11 Score=102.63 Aligned_cols=71 Identities=21% Similarity=0.304 Sum_probs=62.5
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+.+|||++.+ ...|++|..|.++|||+++| |++||+|++|||+++.+.++.++..+++. ++.|.|+|.|..
T Consensus 13 ~~glG~~i~~---~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 85 (106)
T 2la8_A 13 GKELGLSLSP---NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPK 85 (106)
T ss_dssp SSTTCCEEEE---CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEEECC
T ss_pred CCccCEEEEe---CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCC
Confidence 4689999987 23689999999999999999 99999999999999999888888887765 577999999864
No 137
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.22 E-value=3.1e-11 Score=102.64 Aligned_cols=73 Identities=29% Similarity=0.529 Sum_probs=64.1
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||+|.++.+ ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. +..+.|+|.|.+
T Consensus 24 ~~glG~~l~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 24 STGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP 98 (119)
T ss_dssp TSCCCEEEEECGG-GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECH
T ss_pred CCCccEEEecCCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 3579999998654 4699999999999999999 99999999999999999988777777764 788999999865
No 138
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.21 E-value=5.5e-11 Score=96.27 Aligned_cols=82 Identities=30% Similarity=0.374 Sum_probs=69.2
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L 185 (433)
..+.|.+.+...|||.+.++.. ..|++|..|.++|||+++| |++||+|++|||+++. ..++.++...++. ...+.|
T Consensus 6 ~~v~l~k~~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l 83 (92)
T 2qg1_A 6 LTIGLQKKPGKGLGLSIVGKRN-DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVR-NATQEAVAALLKCSLGTVTL 83 (92)
T ss_dssp EEEEEECCTTSCCSEEEECCSS-SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECT-TCCHHHHHHHHHHCCSEEEE
T ss_pred EEEEEEeCCCCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEE
Confidence 3456666667889999987543 5699999999999999999 9999999999999998 6678888888774 478999
Q ss_pred EEEECC
Q psy12296 186 LVHRGV 191 (433)
Q Consensus 186 ~V~R~~ 191 (433)
+|.|.+
T Consensus 84 ~v~R~~ 89 (92)
T 2qg1_A 84 EVGRIS 89 (92)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 999985
No 139
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.21 E-value=1.4e-11 Score=101.97 Aligned_cols=73 Identities=30% Similarity=0.522 Sum_probs=64.2
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||+|.++.+ ..|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. ++.|.|+|.|.+
T Consensus 16 ~~g~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 89 (102)
T 2d90_A 16 SNGYGFYLRAGPE-QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKE 89 (102)
T ss_dssp SSSSSCEEEECSS-SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEEEECSTT
T ss_pred CCCccEEEEeecC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 3589999998433 469999999999999999999999999999999999888888888764 789999998765
No 140
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.21 E-value=4e-11 Score=102.73 Aligned_cols=73 Identities=32% Similarity=0.532 Sum_probs=63.9
Q ss_pred CeEeEEEEecCCC---CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREH---TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~---~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~g 76 (433)
.+|||+|.++.+. ..|++|..|.++|||+++| |++||+|++|||+++.+++..+++.+++. +..|.|+|.|.+
T Consensus 41 ~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 41 EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp TCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred CcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 5799999986542 2689999999999999999 99999999999999999888888888863 688999999865
No 141
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.21 E-value=2.5e-11 Score=100.52 Aligned_cols=70 Identities=23% Similarity=0.425 Sum_probs=61.2
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R 74 (433)
+++|||+|.... ..|++|..|.++|||+++| |++||+|++|||+++.+++..++..+++. +..|+|+|.+
T Consensus 23 ~~~lG~~l~~~~--~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~V~~ 94 (97)
T 2ejy_A 23 EEPMGICLKLNE--KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLKVIP 94 (97)
T ss_dssp SSCCSEEEEECT--TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEEEEC
T ss_pred CCCeeEEEEeCC--CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 578999998633 3699999999999999999 99999999999999999777888888874 6788888874
No 142
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=3.7e-11 Score=99.33 Aligned_cols=73 Identities=34% Similarity=0.613 Sum_probs=61.9
Q ss_pred CeEeEEEEecCCC---------CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEE
Q psy12296 4 GTLGFSIRGGREH---------TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKV 72 (433)
Q Consensus 4 ~gLGfsI~gG~~~---------~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V 72 (433)
++|||++.++.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++. +..+.|+|
T Consensus 16 ~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 95 (103)
T 2fcf_A 16 KSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMV 95 (103)
T ss_dssp CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEE
T ss_pred CceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEE
Confidence 5799999985442 2589999999999999999 99999999999999999888899988875 56899999
Q ss_pred EEcC
Q psy12296 73 RSVG 76 (433)
Q Consensus 73 ~R~g 76 (433)
.|..
T Consensus 96 ~r~~ 99 (103)
T 2fcf_A 96 QSII 99 (103)
T ss_dssp ECCC
T ss_pred EECC
Confidence 8865
No 143
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.21 E-value=5.1e-11 Score=98.20 Aligned_cols=70 Identities=27% Similarity=0.428 Sum_probs=60.5
Q ss_pred CeEeEEEEecCC-CCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEE
Q psy12296 4 GTLGFSIRGGRE-HTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRS 74 (433)
Q Consensus 4 ~gLGfsI~gG~~-~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R 74 (433)
.+|||+|....+ ...|++|..|.++|||+++||++||+|++|||+++.++++.++..++++ ..++|+|+.
T Consensus 20 ~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~-~~l~ltV~~ 90 (94)
T 3kzd_A 20 DTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ-PSLGLLVRT 90 (94)
T ss_dssp -CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS-SEEEEEEEE
T ss_pred CCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CeEEEEEEe
Confidence 479999998433 2458999999999999999999999999999999999998888888874 678888864
No 144
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.21 E-value=1.2e-11 Score=105.95 Aligned_cols=85 Identities=25% Similarity=0.384 Sum_probs=69.7
Q ss_pred ccceEEeeCCCCCCCceeecCCC---CCCceEEEEECCCChhhhc-CCCCCCEEEEEccEecCChhhHHHHHHHhcCC-C
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQ---WKPGIFVQFTKDACVAKDA-GLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-C 181 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~---~~~GV~V~~V~~gspA~~a-GL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~ 181 (433)
...+.|.+.....|||.++++.. ...|++|..|.+++||+++ ||++||+|++|||+++. ..++.+++..++.. .
T Consensus 25 ~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~-~~~~~~~~~~l~~~~~ 103 (120)
T 2iwo_A 25 LRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTE-GMTHTQAVNLLKNASG 103 (120)
T ss_dssp CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECT-TCBHHHHHHHHHHCCS
T ss_pred cEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCC
Confidence 35677777776799999987643 2358999999999999998 89999999999999999 78999999998865 6
Q ss_pred eEEEEEEECCe
Q psy12296 182 LLELLVHRGVG 192 (433)
Q Consensus 182 ~v~L~V~R~~~ 192 (433)
.++|+|.|++.
T Consensus 104 ~v~l~v~r~g~ 114 (120)
T 2iwo_A 104 SIEMQVVAGGD 114 (120)
T ss_dssp EEEEEEECCTT
T ss_pred eEEEEEEECCc
Confidence 89999999864
No 145
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=1.1e-11 Score=103.18 Aligned_cols=73 Identities=29% Similarity=0.581 Sum_probs=64.1
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||+|.++. ...|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..+.|+|.|.+
T Consensus 18 ~~~~G~~l~~~~-~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 91 (106)
T 2eei_A 18 GGSYGFSLKTVQ-GKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKE 91 (106)
T ss_dssp SSSCSCCEECCS-SCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEEEEECCTT
T ss_pred CCCCCEEEEecc-CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCc
Confidence 568999998743 3579999999999999999999999999999999999988888887764 788999998765
No 146
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.20 E-value=3.4e-11 Score=97.40 Aligned_cols=77 Identities=25% Similarity=0.245 Sum_probs=65.7
Q ss_pred CCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEEEEECCe
Q psy12296 115 PPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELLVHRGVG 192 (433)
Q Consensus 115 ~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~V~R~~~ 192 (433)
.....|||.+.++.....|++|..|.++|||+++||++||+|++|||+++. ..++.++...++. +..+.|+|.|++.
T Consensus 10 ~~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g~~v~l~v~R~g~ 87 (91)
T 2pkt_A 10 QGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTS-NMTHLEAQNRIKGCTDNLTLTVARSEH 87 (91)
T ss_dssp ESSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECT-TCCHHHHHHHHHTCSSEEEEEEEEECC
T ss_pred CCCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 345679999987655456899999999999999999999999999999999 6677788877776 4899999999875
No 147
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.20 E-value=4e-11 Score=98.23 Aligned_cols=82 Identities=27% Similarity=0.359 Sum_probs=67.0
Q ss_pred ceEEeeCCCCCCCceeecCCCC------CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC-C
Q psy12296 109 PITLEVPPHGKLGCGICKGPQW------KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS-S 180 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~------~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~ 180 (433)
.+.|.+.....|||.+.++.+. ..|++|..|.++|||+++| |++||+|++|||+++. ..++.+++..++. +
T Consensus 8 ~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g 86 (98)
T 1ihj_A 8 MVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVR-NSTEQAVIDLIKEAD 86 (98)
T ss_dssp EEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECT-TCCHHHHHHHHHHSC
T ss_pred EEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHhcCC
Confidence 4556665677899999876432 2389999999999999999 9999999999999999 6667777777665 4
Q ss_pred CeEEEEEEECC
Q psy12296 181 CLLELLVHRGV 191 (433)
Q Consensus 181 ~~v~L~V~R~~ 191 (433)
..+.|+|.|++
T Consensus 87 ~~v~l~v~R~g 97 (98)
T 1ihj_A 87 FKIELEIQTFD 97 (98)
T ss_dssp SEEEEEEEEC-
T ss_pred CeEEEEEEeCC
Confidence 79999999985
No 148
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.20 E-value=5.8e-11 Score=101.01 Aligned_cols=88 Identities=18% Similarity=0.283 Sum_probs=72.3
Q ss_pred cceEEeeCCCCCCCceeecCCCC-CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC--CeE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQW-KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLL 183 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~-~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v 183 (433)
..+.+.+.....|||.+.++.+. ..|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. ..+
T Consensus 17 ~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~-~~~~~~~~~~l~~~~~~~~ 95 (119)
T 1x6d_A 17 HVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLK-GTTHHDALAILRQAREPRQ 95 (119)
T ss_dssp EEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECS-SCCHHHHHHHHHHTTSSSE
T ss_pred EEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCeE
Confidence 34556666778999999887642 4689999999999999999 9999999999999998 78899999888654 556
Q ss_pred EEEEEECCeeeee
Q psy12296 184 ELLVHRGVGLDLF 196 (433)
Q Consensus 184 ~L~V~R~~~~~~~ 196 (433)
.++|.|++....+
T Consensus 96 ~l~v~R~~~~~~~ 108 (119)
T 1x6d_A 96 AVIVTRKLTPEAM 108 (119)
T ss_dssp EEEEEECCCSSSC
T ss_pred EEEEEcCCCccch
Confidence 6888898765443
No 149
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=5.3e-11 Score=97.04 Aligned_cols=77 Identities=23% Similarity=0.185 Sum_probs=66.5
Q ss_pred CCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCe
Q psy12296 115 PPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVG 192 (433)
Q Consensus 115 ~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~ 192 (433)
.....|||.+.++.+...+++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.. ..+.|+|.|++.
T Consensus 15 ~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~~~~~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 15 RGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTE-LMTHLEAQNRIKGCHDHLTLSVSSGPS 92 (94)
T ss_dssp CCSSCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETT-TCCHHHHHHHHHTCCSCEEEEEECCSS
T ss_pred eCCCccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 345689999998877677899999999999999999999999999999999 56778888877654 789999999863
No 150
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.20 E-value=4.3e-11 Score=101.19 Aligned_cols=70 Identities=27% Similarity=0.470 Sum_probs=62.6
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCC-CCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGL-LIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL-~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
++|||.|.++ ..|++|..|.++|||+++|| ++||+|++|||++|.++++.++..+++. +..|.|+|.|.+
T Consensus 37 ~~lG~~i~~~---~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 108 (113)
T 1va8_A 37 IPLGATVRNE---MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSS 108 (113)
T ss_dssp CCCCEEEEEC---SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEEEECCC
T ss_pred CceeEEEEeC---CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 4899999874 36899999999999999997 9999999999999999988899988864 678999998876
No 151
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.20 E-value=7.7e-11 Score=98.03 Aligned_cols=84 Identities=31% Similarity=0.425 Sum_probs=69.3
Q ss_pred ceEEeeCCCCCCCceeecCCCC-----CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-C
Q psy12296 109 PITLEVPPHGKLGCGICKGPQW-----KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-C 181 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~-----~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~ 181 (433)
.+.|.+.. .+|||.+.++.+. ..|++|..|.++|+|+++| |++||+|++|||+++. ..++.+++..++.. .
T Consensus 6 ~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~ 83 (105)
T 2awx_A 6 EIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLE-EVTHEEAVTALKNTSD 83 (105)
T ss_dssp EEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TCBHHHHHHHHHSCCS
T ss_pred EEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCC
Confidence 34555554 6899999876432 3589999999999999999 9999999999999998 77899999988765 7
Q ss_pred eEEEEEEECCeee
Q psy12296 182 LLELLVHRGVGLD 194 (433)
Q Consensus 182 ~v~L~V~R~~~~~ 194 (433)
.+.|+|.|++...
T Consensus 84 ~v~l~v~R~~~~~ 96 (105)
T 2awx_A 84 FVYLKVAKPTSMY 96 (105)
T ss_dssp EEEEEEECCCC--
T ss_pred eEEEEEEcCCCCC
Confidence 8999999987543
No 152
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.20 E-value=4.3e-11 Score=101.60 Aligned_cols=73 Identities=25% Similarity=0.449 Sum_probs=62.0
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~ 75 (433)
.++|||+|.++.+...+++|..|.++|||+++| |++||+|++|||+++.+.+..++..+++ .+..|.|+|.+.
T Consensus 35 ~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 109 (114)
T 2gzv_A 35 QNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 109 (114)
T ss_dssp TSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECC
T ss_pred CCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEec
Confidence 356999999987766789999999999999999 9999999999999998878788888886 356688888643
No 153
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.20 E-value=4.8e-11 Score=95.95 Aligned_cols=71 Identities=24% Similarity=0.355 Sum_probs=59.5
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~g 76 (433)
..+|||++.+..+ ..|++|..| ++|||+ +||++||+|++|||+++.++++.++...++. +..+.|+|.|.+
T Consensus 13 ~~g~G~~~~~~~~-~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 13 PMGFGFTIADSPG-GGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQT 86 (88)
T ss_dssp TTBSSCEEEECTT-SSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEEC
T ss_pred CCceeEEEEecCC-CCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeCC
Confidence 4689999997433 468999887 999999 9999999999999999999988888888763 789999999876
No 154
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=1.3e-10 Score=99.60 Aligned_cols=85 Identities=24% Similarity=0.241 Sum_probs=71.5
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC---CCeEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS---SCLLE 184 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~~v~ 184 (433)
.+.+.+. ...|||.+.++.....|++|..|.++++|+++| |++||+|++|||+++. ..++.+++++|+. +..+.
T Consensus 22 ~v~l~~~-~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~g~~v~ 99 (123)
T 1ueq_A 22 STTLKKS-NMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVL-GHTHADVVKLFQSVPIGQSVN 99 (123)
T ss_dssp EEEEECC-TTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECT-TSCHHHHHHHHHTSCTTCEEE
T ss_pred EEEEEeC-CCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCCeEE
Confidence 4555553 567999998876656789999999999999999 9999999999999999 7788999888877 37899
Q ss_pred EEEEECCeeee
Q psy12296 185 LLVHRGVGLDL 195 (433)
Q Consensus 185 L~V~R~~~~~~ 195 (433)
|+|.|++...+
T Consensus 100 l~v~R~~~~~~ 110 (123)
T 1ueq_A 100 LVLCRGYPLPF 110 (123)
T ss_dssp EEEEESCCCCC
T ss_pred EEEEeCCCCCC
Confidence 99999875443
No 155
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.20 E-value=6.5e-11 Score=95.43 Aligned_cols=80 Identities=20% Similarity=0.286 Sum_probs=67.4
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC---CeEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS---CLLE 184 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~---~~v~ 184 (433)
.+.|.+.. ..|||.+.++.+...+++|..|.++|||+++| |++||+|++|||+++. ..++.+++..++.. ..+.
T Consensus 5 ~v~l~~~~-~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~~~v~ 82 (90)
T 2q9v_A 5 DIFLWRKE-TGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVI-GKSHQLVVQLMQQAAKQGHVN 82 (90)
T ss_dssp EEEEECBT-TBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TSCHHHHHHHHHHHHHHTEEE
T ss_pred EEEEEECC-CccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCCeEE
Confidence 44555544 67999998876555689999999999999999 9999999999999998 77888888888764 4899
Q ss_pred EEEEEC
Q psy12296 185 LLVHRG 190 (433)
Q Consensus 185 L~V~R~ 190 (433)
|+|.|.
T Consensus 83 l~v~R~ 88 (90)
T 2q9v_A 83 LTVRQT 88 (90)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999886
No 156
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.20 E-value=5.7e-11 Score=97.03 Aligned_cols=83 Identities=25% Similarity=0.343 Sum_probs=68.6
Q ss_pred ceEEeeCCCCCCCceeec--CCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 109 PITLEVPPHGKLGCGICK--GPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~g--g~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
.+.|.+.. .+|||.+.+ +.+...|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.. ..+.|
T Consensus 6 ~v~l~k~~-~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g~~v~l 83 (96)
T 2v90_A 6 CLHLEKGP-QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVE-GLGHEETVSRIQGQGSCVSL 83 (96)
T ss_dssp EEEEECBT-TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECT-TCCHHHHHHHHHTTTTEEEE
T ss_pred EEEEEeCC-CcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCEEEE
Confidence 45555544 489999876 344455899999999999999999999999999999999 66788888888764 89999
Q ss_pred EEEECCee
Q psy12296 186 LVHRGVGL 193 (433)
Q Consensus 186 ~V~R~~~~ 193 (433)
+|.|++..
T Consensus 84 ~v~r~~~~ 91 (96)
T 2v90_A 84 TVVDPEAD 91 (96)
T ss_dssp EEECCCTT
T ss_pred EEECCCCc
Confidence 99998754
No 157
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=6.8e-11 Score=100.77 Aligned_cols=82 Identities=30% Similarity=0.417 Sum_probs=69.8
Q ss_pred ceEEeeCCCCCCCceeecCCC-----CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-C
Q psy12296 109 PITLEVPPHGKLGCGICKGPQ-----WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-C 181 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~-----~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~ 181 (433)
.+.+.+.. .+|||.+.++.+ ...|++|..|.++|+|+++| |++||+|++|||+++. ..++.+++..++.. .
T Consensus 27 ~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~g~ 104 (117)
T 2byg_A 27 EIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLE-EVTHEEAVAILKNTSE 104 (117)
T ss_dssp EEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHHHTCCS
T ss_pred EEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCC
Confidence 45555554 789999987643 24589999999999999999 9999999999999999 88999999999865 7
Q ss_pred eEEEEEEECCe
Q psy12296 182 LLELLVHRGVG 192 (433)
Q Consensus 182 ~v~L~V~R~~~ 192 (433)
.+.|+|.|++.
T Consensus 105 ~v~l~v~R~~~ 115 (117)
T 2byg_A 105 VVYLKVGKPTT 115 (117)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEeCCc
Confidence 89999999753
No 158
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.19 E-value=8.7e-11 Score=96.82 Aligned_cols=83 Identities=29% Similarity=0.459 Sum_probs=69.8
Q ss_pred cceEEeeCCCCCCCceeecCCCC-----CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQW-----KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS- 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~-----~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~- 180 (433)
..+.|.+.. .+|||.+.++.+. ..|++|..|.++++|+++| |++||+|++|||+++. ..++.+++..++..
T Consensus 9 ~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~~~~~g 86 (101)
T 2jik_A 9 EEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLK-NLLHQDAVDLFRNAG 86 (101)
T ss_dssp EEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECS-SCCHHHHHHHHHTCC
T ss_pred EEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCC
Confidence 345666655 7899999987543 3699999999999999999 9999999999999999 67888998888764
Q ss_pred CeEEEEEEECCe
Q psy12296 181 CLLELLVHRGVG 192 (433)
Q Consensus 181 ~~v~L~V~R~~~ 192 (433)
..+.|+|.|++.
T Consensus 87 ~~v~l~v~R~~~ 98 (101)
T 2jik_A 87 YAVSLRVQHRLE 98 (101)
T ss_dssp SEEEEEEEEESC
T ss_pred CeEEEEEEeCCC
Confidence 789999998753
No 159
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.19 E-value=1e-11 Score=98.87 Aligned_cols=69 Identities=28% Similarity=0.475 Sum_probs=60.8
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
..+|||++.++ .|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..++|+|.|.
T Consensus 12 ~~g~G~~~~~~----~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 81 (83)
T 2kv8_A 12 RAGYGFTLSGQ----APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEG 81 (83)
T ss_dssp SSCCSCBCCCS----SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEEECC
T ss_pred CCcccEEEEcC----CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcC
Confidence 36789988762 47999999999999999999999999999999999998889988875 57799999875
No 160
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.19 E-value=1.1e-10 Score=95.71 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=66.0
Q ss_pred CCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCee
Q psy12296 116 PHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVGL 193 (433)
Q Consensus 116 ~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~~ 193 (433)
....|||.+.++.....+++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|+|.|++..
T Consensus 14 ~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 14 YGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLK-GKPLSEAIHLLQMAGETVTLKIKKQTDA 92 (97)
T ss_dssp TTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECT-TCCHHHHHHHHHTCCSEEEEEEECCCCC
T ss_pred CCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEEeCCCC
Confidence 4566999998765444789999999999999999 9999999999999998 66788998888743 7899999998753
No 161
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.19 E-value=4.7e-11 Score=96.70 Aligned_cols=83 Identities=27% Similarity=0.284 Sum_probs=64.9
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELLV 187 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~V 187 (433)
.+.|.+... .|||.+.+... ..|++|..|.++|||+++||++||+|++|||+++. ..++.++.+.++. +..+.|+|
T Consensus 6 ~v~l~k~~~-~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g~~v~l~v 82 (91)
T 2vsp_A 6 LCRLAKGEN-GYGFHLNAIRG-LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVL-DEPYEKVVDRIQSSGKNVTLLV 82 (91)
T ss_dssp EEEEECBTT-BTSCCCBCCTT-CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECT-TSCHHHHHHHHTTSCSEEEEEE
T ss_pred EEEEEeCCC-cccEEEEeccC-CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCEEEEEE
Confidence 455555544 79999876432 46899999999999999999999999999999998 7788999988877 48999999
Q ss_pred EECCeee
Q psy12296 188 HRGVGLD 194 (433)
Q Consensus 188 ~R~~~~~ 194 (433)
.|++...
T Consensus 83 ~r~~~~~ 89 (91)
T 2vsp_A 83 CGKKAQD 89 (91)
T ss_dssp EC-----
T ss_pred EeCCccc
Confidence 9987543
No 162
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.19 E-value=6.9e-11 Score=96.36 Aligned_cols=82 Identities=24% Similarity=0.363 Sum_probs=68.0
Q ss_pred ceEEeeC-CCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 109 PITLEVP-PHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 109 ~v~L~~~-~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
.+.|.+. ....|||.+.++.. ..|++|..|.++|||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|
T Consensus 6 ~v~l~k~~~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~~~~~g~~v~l 83 (95)
T 2vwr_A 6 QVALHKRDSGEQLGIKLVRRTD-EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLK-YGTPELAAQIIQASGERVNL 83 (95)
T ss_dssp EEEEECSSTTCCCCEEEEECSS-SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHHHHCCSEEEE
T ss_pred EEEEEECCCCCcccEEEEeccC-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCEEEE
Confidence 3455553 45679999977544 4689999999999999999 9999999999999999 77788888887654 89999
Q ss_pred EEEECCe
Q psy12296 186 LVHRGVG 192 (433)
Q Consensus 186 ~V~R~~~ 192 (433)
+|.|++.
T Consensus 84 ~v~R~~~ 90 (95)
T 2vwr_A 84 TIARPGK 90 (95)
T ss_dssp EEEEESC
T ss_pred EEEcCCc
Confidence 9999864
No 163
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.19 E-value=7.5e-11 Score=96.53 Aligned_cols=82 Identities=27% Similarity=0.338 Sum_probs=66.4
Q ss_pred cceEEeeCCCCCCCceeec-------CCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC
Q psy12296 108 VPITLEVPPHGKLGCGICK-------GPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~g-------g~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~ 180 (433)
..+.|.+.....|||.+.+ +.....|++|..|.+++||+++||++||+|++|||+++. ..++.++.+.++..
T Consensus 6 r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~l~~~ 84 (96)
T 2ego_A 6 KVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVE-GIRHREIVDIIKAS 84 (96)
T ss_dssp EEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECT-TCCHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhC
Confidence 3566677777789999986 333356899999999999999999999999999999999 66678888877654
Q ss_pred -CeEEEEEEEC
Q psy12296 181 -CLLELLVHRG 190 (433)
Q Consensus 181 -~~v~L~V~R~ 190 (433)
..+.|+|.++
T Consensus 85 ~~~v~l~v~~~ 95 (96)
T 2ego_A 85 GNVLRLETLYG 95 (96)
T ss_dssp TTEEEEEEECC
T ss_pred CCeEEEEEEEC
Confidence 6899998775
No 164
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=4e-11 Score=99.55 Aligned_cols=83 Identities=20% Similarity=0.275 Sum_probs=70.5
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC---CeE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS---CLL 183 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~---~~v 183 (433)
..+.|.+ ....|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++. ..++.+++++++.. ..+
T Consensus 11 ~~v~l~~-~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~-~~~~~~~~~~l~~~~~g~~v 88 (103)
T 1uep_A 11 LDVHLRR-MESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVA-GKTHRYVIDLMHHAARNGQV 88 (103)
T ss_dssp ECCEEES-SSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECT-TSCHHHHHHHHHHHHHHTEE
T ss_pred EEEEEEe-CCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCCcE
Confidence 3455555 4567999998876656789999999999999999 9999999999999998 77899999888763 799
Q ss_pred EEEEEECCe
Q psy12296 184 ELLVHRGVG 192 (433)
Q Consensus 184 ~L~V~R~~~ 192 (433)
.|+|.|++.
T Consensus 89 ~l~v~R~~~ 97 (103)
T 1uep_A 89 NLTVRRKVL 97 (103)
T ss_dssp EEEEEEECC
T ss_pred EEEEEeCCC
Confidence 999999864
No 165
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.18 E-value=3.9e-11 Score=96.99 Aligned_cols=67 Identities=27% Similarity=0.426 Sum_probs=59.7
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
+++|||.+.+ |++|..|.++|+|+++| |++||+|++|||+++.+.++.+++.+++. +..|+|++.+.
T Consensus 12 ~~~~G~~~~~------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~ 80 (88)
T 3e17_A 12 NEEYGLRLGS------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRD 80 (88)
T ss_dssp BCCCCEEEEE------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC
T ss_pred CCCCCEEEeC------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCC
Confidence 4578998875 79999999999999999 99999999999999999999999999875 67888888643
No 166
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=5.1e-11 Score=101.04 Aligned_cols=71 Identities=31% Similarity=0.479 Sum_probs=62.5
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
.+|||.+.++.+ .|++|..|.++|||+++||++||+|++|||+++.++++.+++..+. .++.|.|+|.|++
T Consensus 30 ~~lG~~~~~~~~--~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~ 101 (117)
T 1uit_A 30 EPLGISIVSGEK--GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNP 101 (117)
T ss_dssp CCCCEEEEECTT--SCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCCS
T ss_pred CCccEEEEccCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 589999997544 5999999999999999999999999999999999998887776554 4789999999876
No 167
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.18 E-value=4e-11 Score=96.08 Aligned_cols=80 Identities=29% Similarity=0.384 Sum_probs=67.6
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhh-cCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKD-AGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~-aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
.+.|.+.....|||.+.++.....+++|..|.++|||++ +||++||+|++|||+++. ..++.+++..++.. ..+.|+
T Consensus 5 ~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l~ 83 (87)
T 4e34_A 5 KVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLR-DTKHKEAVTILSQQRGEIEFE 83 (87)
T ss_dssp EEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECT-TCCHHHHHHHHHHCCSEEEEE
T ss_pred EEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEE
Confidence 456666667789999987655456899999999999999 699999999999999998 77999999988765 678888
Q ss_pred EEE
Q psy12296 187 VHR 189 (433)
Q Consensus 187 V~R 189 (433)
|.+
T Consensus 84 v~~ 86 (87)
T 4e34_A 84 VVY 86 (87)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 168
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.18 E-value=7.8e-11 Score=98.53 Aligned_cols=77 Identities=30% Similarity=0.400 Sum_probs=66.6
Q ss_pred CCCCCCCceeecCCCCC-----CceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEE
Q psy12296 115 PPHGKLGCGICKGPQWK-----PGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLV 187 (433)
Q Consensus 115 ~~~~~LG~~l~gg~~~~-----~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V 187 (433)
.....|||++.+|.... .|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|+|
T Consensus 10 ~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~~v~l~v 88 (106)
T 4amh_A 10 RGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALE-EVTHEEAVTALKNTSDFVYLKV 88 (106)
T ss_dssp --CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECS-SCCHHHHHHHHHSCCSEEEEEE
T ss_pred CCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHhCCCCeEEEEE
Confidence 34678999999886533 389999999999999999 9999999999999998 78899999988775 7899999
Q ss_pred EECCe
Q psy12296 188 HRGVG 192 (433)
Q Consensus 188 ~R~~~ 192 (433)
.|++.
T Consensus 89 ~R~~~ 93 (106)
T 4amh_A 89 AKPGS 93 (106)
T ss_dssp ECCSS
T ss_pred EeCCC
Confidence 99864
No 169
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.18 E-value=2.2e-11 Score=102.23 Aligned_cols=83 Identities=23% Similarity=0.360 Sum_probs=68.9
Q ss_pred ceEEeeCCCCCCCceeecCCCC--CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC----C
Q psy12296 109 PITLEVPPHGKLGCGICKGPQW--KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS----C 181 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~--~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~----~ 181 (433)
.+.|.+.....|||.+.++... ..|++|..|.+++||+++| |++||+|++|||+++. .+++++++.+|+.. .
T Consensus 8 ~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~~~~ 86 (108)
T 3cbz_A 8 TVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFE-NMSNDDAVRVLRDIVHKPG 86 (108)
T ss_dssp EEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETT-SCCHHHHHHHHHHHHTSSS
T ss_pred EEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhcccCCC
Confidence 4455555567899999876432 5789999999999999999 9999999999999999 77899999988653 4
Q ss_pred eEEEEEEECCe
Q psy12296 182 LLELLVHRGVG 192 (433)
Q Consensus 182 ~v~L~V~R~~~ 192 (433)
.+.|+|.|...
T Consensus 87 ~v~l~v~R~~~ 97 (108)
T 3cbz_A 87 PIVLTVAKSGG 97 (108)
T ss_dssp CEEEEEECCCC
T ss_pred eEEEEEEeCCC
Confidence 79999999754
No 170
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.18 E-value=5.2e-11 Score=102.49 Aligned_cols=74 Identities=34% Similarity=0.606 Sum_probs=63.8
Q ss_pred CCeEeEEEEecCC---------CCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEE
Q psy12296 3 NGTLGFSIRGGRE---------HTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLK 71 (433)
Q Consensus 3 ~~gLGfsI~gG~~---------~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~ 71 (433)
.++|||++.++.+ ...|++|..|.++|||+++| |++||+|++|||+++.+++..++..+++. +..|.|+
T Consensus 35 ~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~ 114 (123)
T 2iwq_A 35 SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFM 114 (123)
T ss_dssp TSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEE
T ss_pred CCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 3689999987543 23689999999999999999 99999999999999999888899888864 5689999
Q ss_pred EEEcC
Q psy12296 72 VRSVG 76 (433)
Q Consensus 72 V~R~g 76 (433)
|.|..
T Consensus 115 v~r~~ 119 (123)
T 2iwq_A 115 VQSII 119 (123)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 98765
No 171
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.17 E-value=6.3e-11 Score=101.47 Aligned_cols=74 Identities=32% Similarity=0.531 Sum_probs=64.5
Q ss_pred CCeEeEEEEecC----CCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGR----EHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~----~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R 74 (433)
..+|||+|.++. +...+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++. +..|+|+|.|
T Consensus 26 ~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 105 (122)
T 1v5q_A 26 VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEF 105 (122)
T ss_dssp SSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEE
T ss_pred CCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEE
Confidence 478999999863 124579999999999999999 99999999999999999888888888863 6789999999
Q ss_pred cC
Q psy12296 75 VG 76 (433)
Q Consensus 75 ~g 76 (433)
++
T Consensus 106 ~~ 107 (122)
T 1v5q_A 106 DV 107 (122)
T ss_dssp EC
T ss_pred CC
Confidence 77
No 172
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.17 E-value=4.9e-11 Score=99.18 Aligned_cols=84 Identities=27% Similarity=0.328 Sum_probs=71.6
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhc-CCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDA-GLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~a-GL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
..+.+.+.....|||.+.++.+...|++|..|.++++|+++ ||++||+|++|||+++. ..++.+++..++.. ..+.|
T Consensus 11 ~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~-~~~~~~~~~~l~~~~~~v~l 89 (103)
T 2dc2_A 11 RKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLR-DTKHKEAVTILSQQRGEIEF 89 (103)
T ss_dssp EEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEEST-TSCHHHHHHHHHHCCSEEEE
T ss_pred EEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCcEEE
Confidence 34566666778899999887554568999999999999995 99999999999999999 77999999998775 78999
Q ss_pred EEEECCe
Q psy12296 186 LVHRGVG 192 (433)
Q Consensus 186 ~V~R~~~ 192 (433)
+|.|...
T Consensus 90 ~v~~~~~ 96 (103)
T 2dc2_A 90 EVVYVAL 96 (103)
T ss_dssp EEEECC-
T ss_pred EEEecCC
Confidence 9998754
No 173
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.17 E-value=2.7e-11 Score=102.44 Aligned_cols=73 Identities=33% Similarity=0.573 Sum_probs=64.2
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||.|..+.+ ..|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. ++.|.|+|.|.+
T Consensus 24 ~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 97 (114)
T 2edz_A 24 GQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDGD 97 (114)
T ss_dssp TCCCSCEEECCTT-CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEEEECHH
T ss_pred CCcccEEEEEecC-CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 4578999886433 479999999999999999999999999999999999888888888864 789999999876
No 174
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.17 E-value=1.9e-10 Score=92.80 Aligned_cols=81 Identities=20% Similarity=0.320 Sum_probs=68.2
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
..+.+.+.. .+|||.+.++.. ..|++|..|.+++||+++||++||+|++|||+++. ..++.++.+.++.. ..+.|+
T Consensus 6 r~v~l~k~~-~g~G~~~~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~v~l~ 82 (90)
T 2he4_A 6 RLCHLRKGP-QGYGFNLHSDKS-RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVE-GLRHAEVVASIKAREDEARLL 82 (90)
T ss_dssp EEEEEECBT-TBCCEEEEECSS-SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TSCHHHHHHHHTTSSSEEEEE
T ss_pred EEEEEEECC-CCccEEEEccCC-CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCcEEEE
Confidence 345555544 579999987543 46899999999999999999999999999999999 67778999988876 789999
Q ss_pred EEECC
Q psy12296 187 VHRGV 191 (433)
Q Consensus 187 V~R~~ 191 (433)
|.|.+
T Consensus 83 v~r~~ 87 (90)
T 2he4_A 83 VVGPS 87 (90)
T ss_dssp EECCC
T ss_pred EEccC
Confidence 99875
No 175
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.17 E-value=2.3e-10 Score=92.34 Aligned_cols=80 Identities=24% Similarity=0.343 Sum_probs=65.2
Q ss_pred ceEEeeCCC-CCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEE
Q psy12296 109 PITLEVPPH-GKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~-~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~ 186 (433)
.+.|.+... ..|||.+.++.. ..|++|..|.++++|+++||++||+|++|||+++. ..++.+++..++. +..+.|+
T Consensus 9 ~v~l~k~~~~~~~G~~~~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~-~~~~~~~~~~~~~~g~~v~l~ 86 (91)
T 1m5z_A 9 KVTLYKDSGMEDFGFSVADGLL-EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTR-DFDCCLVVPLIAESGNKLDLV 86 (91)
T ss_dssp EEEEECCTTCSSSSEEEEECTT-SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TCCHHHHHHHHHTSTTEEEEE
T ss_pred EEEEEECCCCCCccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCEEEEE
Confidence 345555443 579999987643 46999999999999999999999999999999999 6667777777665 4789999
Q ss_pred EEEC
Q psy12296 187 VHRG 190 (433)
Q Consensus 187 V~R~ 190 (433)
|.|+
T Consensus 87 v~R~ 90 (91)
T 1m5z_A 87 ISRN 90 (91)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9886
No 176
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.16 E-value=1.2e-10 Score=100.07 Aligned_cols=81 Identities=20% Similarity=0.287 Sum_probs=71.0
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
.+.+.+.....|||.+.++.....+++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|+
T Consensus 22 ~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~-~~~~~~~~~~l~~~~~~v~l~ 100 (125)
T 3hpk_A 22 KVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIK-GKTKVEVAKMIQEVKGEVTIH 100 (125)
T ss_dssp EEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHHHHSCSEEEEE
T ss_pred EEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEE
Confidence 45566667788999999887666789999999999999999 9999999999999998 88999999998865 679999
Q ss_pred EEEC
Q psy12296 187 VHRG 190 (433)
Q Consensus 187 V~R~ 190 (433)
|.|.
T Consensus 101 v~r~ 104 (125)
T 3hpk_A 101 YNKL 104 (125)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9884
No 177
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.16 E-value=1.7e-10 Score=93.61 Aligned_cols=81 Identities=27% Similarity=0.368 Sum_probs=67.4
Q ss_pred ceEEeeCCCCCCCceeecCCC-----CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-C
Q psy12296 109 PITLEVPPHGKLGCGICKGPQ-----WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-C 181 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~-----~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~ 181 (433)
.+.|.+. ...|||.+.++.. ...|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. .
T Consensus 6 ~v~l~k~-~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~ 83 (94)
T 2fe5_A 6 EVNLLKG-PKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQ-DVRHEEAVASLKNTSD 83 (94)
T ss_dssp EEEEECC-TTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TCBHHHHHHHHHTCCS
T ss_pred EEEEEEC-CCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCC
Confidence 4555554 4679999987643 23589999999999999999 9999999999999999 77888998888765 6
Q ss_pred eEEEEEEECC
Q psy12296 182 LLELLVHRGV 191 (433)
Q Consensus 182 ~v~L~V~R~~ 191 (433)
.+.|+|.|++
T Consensus 84 ~v~l~v~R~g 93 (94)
T 2fe5_A 84 MVYLKVAKPG 93 (94)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEcCC
Confidence 8999998875
No 178
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=8.8e-11 Score=95.13 Aligned_cols=82 Identities=30% Similarity=0.426 Sum_probs=68.8
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
..+.|.+. ...|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|
T Consensus 7 r~v~l~k~-~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l 84 (93)
T 2dkr_A 7 GVVELPKT-DEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVE-GEQHEKAVELLKAAQGSVKL 84 (93)
T ss_dssp CEEEEECC-TTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECT-TSCHHHHHHHHHHCCSEEEE
T ss_pred EEEEEEeC-CCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCcEEE
Confidence 34556554 478999998776656799999999999999996 9999999999999999 66888998888754 68999
Q ss_pred EEEECC
Q psy12296 186 LVHRGV 191 (433)
Q Consensus 186 ~V~R~~ 191 (433)
+|.|+.
T Consensus 85 ~v~r~~ 90 (93)
T 2dkr_A 85 VVRSGP 90 (93)
T ss_dssp EECCCC
T ss_pred EEEeCC
Confidence 998874
No 179
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=3.6e-11 Score=102.53 Aligned_cols=84 Identities=36% Similarity=0.437 Sum_probs=70.0
Q ss_pred cceEEeeCCCCCCCceeecCCC---CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-Ce
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ---WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CL 182 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~---~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~ 182 (433)
..+.|.+.. .+|||.+.++.+ ...|++|..|.++|||+++| |++||+|++|||+++. ..++.+++..++.. ..
T Consensus 27 ~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~~ 104 (117)
T 2fne_A 27 KSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLE-GVTHEEAVAILKRTKGT 104 (117)
T ss_dssp EEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHHHHCCSS
T ss_pred EEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCe
Confidence 456666655 679999987532 13589999999999999999 9999999999999999 77899999988754 67
Q ss_pred EEEEEEECCee
Q psy12296 183 LELLVHRGVGL 193 (433)
Q Consensus 183 v~L~V~R~~~~ 193 (433)
+.|+|.|+++.
T Consensus 105 v~l~v~R~g~~ 115 (117)
T 2fne_A 105 VTLMVLSSDET 115 (117)
T ss_dssp EEEEEEECSCE
T ss_pred EEEEEEeCCcc
Confidence 99999998754
No 180
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.3e-10 Score=97.03 Aligned_cols=82 Identities=30% Similarity=0.420 Sum_probs=69.0
Q ss_pred cceEEeeCCCCCCCceeecCCC--------CCCceEEEEECCCChhhhc-CCCCCCEEEEEccEecCChhhHHHHHHHhc
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ--------WKPGIFVQFTKDACVAKDA-GLKCGDQILACNGVKFSPDVTFEHAVSVMK 178 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~--------~~~GV~V~~V~~gspA~~a-GL~~GD~Il~ING~~v~s~~s~~eav~~Lr 178 (433)
..+.|.+. ...|||.+.++.. ...|++|..|.+++||+++ ||++||+|++|||+++. ..++.+++..++
T Consensus 10 ~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~-~~~~~~~~~~~~ 87 (107)
T 1uhp_A 10 LTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLS-RATHDQAVEAFK 87 (107)
T ss_dssp EEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECT-TCCHHHHHHHHH
T ss_pred EEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHH
Confidence 44555554 5789999987653 2468999999999999999 89999999999999998 888999999887
Q ss_pred CC-CeEEEEEEECC
Q psy12296 179 SS-CLLELLVHRGV 191 (433)
Q Consensus 179 ~~-~~v~L~V~R~~ 191 (433)
.. ..+.|+|.|..
T Consensus 88 ~~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 88 TAKEPIVVQVLRRT 101 (107)
T ss_dssp HCCSSEEEEEEECC
T ss_pred cCCCcEEEEEEeCC
Confidence 54 78999998874
No 181
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.16 E-value=1.9e-10 Score=92.85 Aligned_cols=79 Identities=25% Similarity=0.383 Sum_probs=64.2
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLV 187 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V 187 (433)
.+.+.+.. .+|||.+.++.. ..|++|..|.++|||+++||++||+|++|||+++. ..++.+++..++.. ..+.+++
T Consensus 6 ~v~l~r~~-~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~~~~~~ 82 (91)
T 1g9o_A 6 LCCLEKGP-NGYGFHLHGEKG-KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVE-KETHQQVVSRIRAALNAVRLLV 82 (91)
T ss_dssp EEEEECBT-TBCCEEEEECTT-CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECT-TCCHHHHHHHHHTCSSEEEEEE
T ss_pred EEEEEeCC-CcccEEEEecCC-CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCcEEEEE
Confidence 45555554 579999987553 46999999999999999999999999999999999 77899999998875 5555555
Q ss_pred EEC
Q psy12296 188 HRG 190 (433)
Q Consensus 188 ~R~ 190 (433)
.|.
T Consensus 83 ~~r 85 (91)
T 1g9o_A 83 VDP 85 (91)
T ss_dssp ECC
T ss_pred EcC
Confidence 444
No 182
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=6.7e-11 Score=96.23 Aligned_cols=70 Identities=21% Similarity=0.367 Sum_probs=61.0
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
+++|||+|.+ ...|++|..|.++|||+++| |++||+|++|||+++ +.++.++..+++. ++.|.|+|.|..
T Consensus 17 ~~~lG~~i~~---~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 17 GEHLGVTFRV---EGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVILKILSGP 88 (91)
T ss_dssp TCCCCEEEEE---SSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCEEEECCS
T ss_pred CCcEeEEEEe---cCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 4689999997 24689999999999999987 999999999999999 7788889988875 677889988643
No 183
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=9.9e-11 Score=94.59 Aligned_cols=81 Identities=12% Similarity=0.171 Sum_probs=68.6
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhh-cCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKD-AGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~-aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
.+.|.+.+...||+.+.++. ..+++|..|.+++||++ +||++||+|++|||+++. +++++++++.++.. ..+.|+
T Consensus 4 ~V~l~K~~~~~lG~~i~~~~--~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~-~~~~~~~~~~l~~~~~~v~l~ 80 (88)
T 1kwa_A 4 LVQFQKNTDEPMGITLKMNE--LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVA-NQTVEQLQKMLREMRGSITFK 80 (88)
T ss_dssp EEEEEECSSSCCCEEEECSC--GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGG-GSCHHHHHHHHHHCCEEEEEE
T ss_pred EEEEEeCCCCceeEEEEeCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHhcCCCcEEEE
Confidence 46677777788999997532 35799999999999999 789999999999999999 88999999998765 578899
Q ss_pred EEECCe
Q psy12296 187 VHRGVG 192 (433)
Q Consensus 187 V~R~~~ 192 (433)
|.|.+.
T Consensus 81 v~r~~~ 86 (88)
T 1kwa_A 81 IVPSYR 86 (88)
T ss_dssp EECCCC
T ss_pred EECCcC
Confidence 988754
No 184
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.4e-10 Score=98.66 Aligned_cols=85 Identities=20% Similarity=0.255 Sum_probs=71.6
Q ss_pred ccceEEeeCCCCCCCceeecCCCCC-CceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeE
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQWK-PGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLL 183 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~~~-~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v 183 (433)
...+.|.+.....|||.+.++.... .+++|..|.++++|+++| |++||+|++|||+++. ..++++++++|+.. ..+
T Consensus 16 ~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~-~~~~~~~~~~l~~~g~~v 94 (117)
T 1v62_A 16 PLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSME-HCSLLEATKLLASISEKV 94 (117)
T ss_dssp SEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETT-SCCHHHHHHHHHSCSSEE
T ss_pred cEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeE
Confidence 3456677776678999998754323 359999999999999999 9999999999999998 77999999999754 899
Q ss_pred EEEEEECCe
Q psy12296 184 ELLVHRGVG 192 (433)
Q Consensus 184 ~L~V~R~~~ 192 (433)
.|+|.|++.
T Consensus 95 ~l~v~r~~~ 103 (117)
T 1v62_A 95 RLEILPVPQ 103 (117)
T ss_dssp EEEECCBTT
T ss_pred EEEEEECCC
Confidence 999999864
No 185
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.78 E-value=3.1e-12 Score=108.53 Aligned_cols=71 Identities=34% Similarity=0.688 Sum_probs=62.7
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHh-CCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAER-SGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVR 73 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~-aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~ 73 (433)
+++|||+|.+|.+...|++|..|.++|||++ +||++||+|++|||+++.+.+..+++.+++. +..|+|+|.
T Consensus 38 ~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~l~V~ 110 (112)
T 2lob_A 38 HEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVV 110 (112)
Confidence 4699999999888778999999999999999 8999999999999999998888888888864 556777765
No 186
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.15 E-value=4.5e-11 Score=99.30 Aligned_cols=70 Identities=30% Similarity=0.469 Sum_probs=59.7
Q ss_pred CCeEeEEEEec-------CCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEE
Q psy12296 3 NGTLGFSIRGG-------REHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKV 72 (433)
Q Consensus 3 ~~gLGfsI~gG-------~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V 72 (433)
+++|||+|.+. .+...|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..|+|+|
T Consensus 26 ~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 103 (104)
T 2z17_A 26 NETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIET 103 (104)
T ss_dssp TSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHTTTEEEEEC
T ss_pred CCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEE
Confidence 46899999983 233468999999999999999999999999999999998888899988864 45777765
No 187
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.15 E-value=1.4e-10 Score=97.89 Aligned_cols=83 Identities=22% Similarity=0.405 Sum_probs=69.7
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
..+.+.+.. .+|||.+.++.+...|++|..|.++++|+++| |++||+|++|||+++. ..++.+++..++.. ..+.|
T Consensus 26 ~~v~l~~~~-~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~g~~v~l 103 (112)
T 2r4h_A 26 YTVELERGA-KGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTK-NMKHSRAIELIKNGGRRVRL 103 (112)
T ss_dssp EEEEEECBT-TBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECT-TCCHHHHHHHHHTTTTEEEE
T ss_pred EEEEEEcCC-CccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEE
Confidence 345555543 57999998875556799999999999999999 9999999999999998 66889998888754 78999
Q ss_pred EEEECCe
Q psy12296 186 LVHRGVG 192 (433)
Q Consensus 186 ~V~R~~~ 192 (433)
+|.|++.
T Consensus 104 ~v~R~~~ 110 (112)
T 2r4h_A 104 FLKRGET 110 (112)
T ss_dssp EEECCEE
T ss_pred EEEeCCc
Confidence 9999864
No 188
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.15 E-value=2.2e-10 Score=93.82 Aligned_cols=82 Identities=26% Similarity=0.373 Sum_probs=68.4
Q ss_pred ceEEeeCCCCCCCceeecCCCCC-CceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWK-PGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~-~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
.+.+.+. ...|||.+.++.+.. .|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|
T Consensus 7 ~v~l~~~-~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l 84 (98)
T 2opg_A 7 TIEISKG-RTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLR-KATHDEAINVLRQTPQRVRL 84 (98)
T ss_dssp EEEEECB-TTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHHHTCCSEEEE
T ss_pred EEEEEEC-CCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEE
Confidence 3444443 467999998765433 589999999999999999 9999999999999999 66788999888765 78999
Q ss_pred EEEECCe
Q psy12296 186 LVHRGVG 192 (433)
Q Consensus 186 ~V~R~~~ 192 (433)
+|.|++.
T Consensus 85 ~v~R~~~ 91 (98)
T 2opg_A 85 TLYRDEA 91 (98)
T ss_dssp EEEECSS
T ss_pred EEEcCCC
Confidence 9999864
No 189
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=9.5e-11 Score=99.63 Aligned_cols=75 Identities=24% Similarity=0.342 Sum_probs=65.6
Q ss_pred CCCCCceeecCCC-----CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEE
Q psy12296 117 HGKLGCGICKGPQ-----WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHR 189 (433)
Q Consensus 117 ~~~LG~~l~gg~~-----~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R 189 (433)
...|||.|.++.. ...|++|..|.++++|+++| |++||+|++|||+++. ..++.+++.+++.. ..+.|+|.|
T Consensus 29 ~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~-~~~~~~~~~~l~~~~~~v~l~v~R 107 (117)
T 1ujd_A 29 GNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLT-SKTYEEVQSIISQQSGEAEICVRL 107 (117)
T ss_dssp CCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECT-TCCHHHHHHHHSCCSSCEEEEEES
T ss_pred CCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcC-CCCHHHHHHHHhcCCCEEEEEEEE
Confidence 4679999987643 23489999999999999999 9999999999999999 88899999999875 789999999
Q ss_pred CCe
Q psy12296 190 GVG 192 (433)
Q Consensus 190 ~~~ 192 (433)
++.
T Consensus 108 ~~~ 110 (117)
T 1ujd_A 108 DLN 110 (117)
T ss_dssp SCC
T ss_pred CCc
Confidence 864
No 190
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.15 E-value=1.3e-10 Score=96.03 Aligned_cols=82 Identities=32% Similarity=0.408 Sum_probs=68.6
Q ss_pred ceEEeeCCCCCCCceeecCCC-----CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-C
Q psy12296 109 PITLEVPPHGKLGCGICKGPQ-----WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-C 181 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~-----~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~ 181 (433)
.+.|.+. ..+|||.+.++.+ ...|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. .
T Consensus 7 ~v~l~k~-~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~~~~~g~ 84 (102)
T 2i1n_A 7 EIVLERG-NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVS-EVVHSRAVEALKEAGP 84 (102)
T ss_dssp EEEEECB-TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECS-SCCHHHHHHHHHHSCS
T ss_pred EEEEEEC-CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCC
Confidence 3445543 5679999988653 24699999999999999999 9999999999999998 77788888887765 8
Q ss_pred eEEEEEEECCe
Q psy12296 182 LLELLVHRGVG 192 (433)
Q Consensus 182 ~v~L~V~R~~~ 192 (433)
.+.|+|.|++.
T Consensus 85 ~v~l~v~R~~~ 95 (102)
T 2i1n_A 85 VVRLVVRRRQP 95 (102)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEEeCCC
Confidence 99999999864
No 191
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.15 E-value=1.2e-10 Score=93.94 Aligned_cols=70 Identities=31% Similarity=0.425 Sum_probs=59.0
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g 76 (433)
.+|||++... ..|++|..|.++|||+++||++||+|++|||+++.+.+..++..++. .+..|.|+|.|++
T Consensus 17 ~~lG~~~~~~---~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 17 LDFGFTIKWD---IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp SCCSEEEEEE---TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CcccEEEEec---CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 3799998742 35899999999999999999999999999999996666667776665 3788999999875
No 192
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.15 E-value=2.1e-10 Score=96.30 Aligned_cols=73 Identities=25% Similarity=0.378 Sum_probs=64.2
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCC-CCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGL-LIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL-~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~V~R~g 76 (433)
.++|||.+.++.+ ..|++|..|.++|||+++|| ++||+|++|||+++.++++.++..+++. +..+.|+|.|++
T Consensus 12 ~~glG~~~~~~~~-~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g 87 (112)
T 1qau_A 12 VGGLGFLVKERVS-KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGP 87 (112)
T ss_dssp TTBTSEEEEECSS-SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEECC
T ss_pred CCceeEEEEecCC-CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeCC
Confidence 3689999997543 46899999999999999997 9999999999999999888888888863 688999999987
No 193
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=4e-11 Score=102.04 Aligned_cols=85 Identities=26% Similarity=0.304 Sum_probs=72.2
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhc--CCCCCCEEEEEccEecCChhhHHHHHHHhcCC-----
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDA--GLKCGDQILACNGVKFSPDVTFEHAVSVMKSS----- 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~a--GL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~----- 180 (433)
..+.+.+.....|||.+.++.+...|++|..|.++++|+++ ||++||+|++|||+++. ..++.+++..++..
T Consensus 17 ~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~-~~~~~~~~~~~~~~~~~~~ 95 (119)
T 2cs5_A 17 VLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIA-EHTHDQVVLFIKASCERHS 95 (119)
T ss_dssp EEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTT-SSCHHHHHHHHHHHHHCCS
T ss_pred EEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhccccCC
Confidence 44666666667899999887655568999999999999999 99999999999999999 77899999988765
Q ss_pred CeEEEEEEECCee
Q psy12296 181 CLLELLVHRGVGL 193 (433)
Q Consensus 181 ~~v~L~V~R~~~~ 193 (433)
..+.|+|.|+...
T Consensus 96 ~~v~l~v~R~~~~ 108 (119)
T 2cs5_A 96 GELMLLVRPNAVY 108 (119)
T ss_dssp SCEEEEEECCCCC
T ss_pred CEEEEEEEccccc
Confidence 4899999998643
No 194
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.15 E-value=2.4e-10 Score=93.23 Aligned_cols=82 Identities=27% Similarity=0.492 Sum_probs=67.9
Q ss_pred ceEEeeCCCCCCCceeecCCC---CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQ---WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLL 183 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~---~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v 183 (433)
.+.|.+. ...|||.+.++.. ...|++|..|.++|+|+++| |++||+|++|||+++. ..++.+++..++.. ..+
T Consensus 8 ~v~l~k~-~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~l~~~g~~v 85 (96)
T 1d5g_A 8 EVELAKN-DNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLE-GATHKQAVETLRNTGQVV 85 (96)
T ss_dssp EEEEECS-SSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECT-TCCHHHHHHHHHSCCSEE
T ss_pred EEEEEeC-CCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeE
Confidence 3444443 4689999987643 23589999999999999999 9999999999999999 77889999888765 789
Q ss_pred EEEEEECCe
Q psy12296 184 ELLVHRGVG 192 (433)
Q Consensus 184 ~L~V~R~~~ 192 (433)
.|+|.|++.
T Consensus 86 ~l~v~R~~~ 94 (96)
T 1d5g_A 86 HLLLEKGQS 94 (96)
T ss_dssp EEEEECCSC
T ss_pred EEEEEcCCC
Confidence 999998753
No 195
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.15 E-value=6.6e-11 Score=98.57 Aligned_cols=82 Identities=27% Similarity=0.314 Sum_probs=69.9
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC--CCCCCEEEEEccEecCChhhHHHHHHHhcCC-C---
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG--LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-C--- 181 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG--L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~--- 181 (433)
..+.|.+.....|||.+.++.+...+++|..|.++++|+++| |++||+|++|||+++. ..++.+++..++.. .
T Consensus 19 ~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~-~~~~~~~~~~i~~~~~~~~ 97 (107)
T 3nfk_A 19 VLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIA-EHTHDQVVLFIKASCERHS 97 (107)
T ss_dssp EEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECT-TCCHHHHHHHHHCGGGSBT
T ss_pred EEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECC-CCCHHHHHHHHHhccccCC
Confidence 445566666678999998766555689999999999999999 9999999999999999 88889999998876 3
Q ss_pred -eEEEEEEEC
Q psy12296 182 -LLELLVHRG 190 (433)
Q Consensus 182 -~v~L~V~R~ 190 (433)
.+.|+|.|+
T Consensus 98 ~~v~l~v~r~ 107 (107)
T 3nfk_A 98 GELMLLVRPN 107 (107)
T ss_dssp TBEEEEEECC
T ss_pred cEEEEEEEcC
Confidence 899999874
No 196
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.15 E-value=1.1e-10 Score=98.62 Aligned_cols=70 Identities=36% Similarity=0.462 Sum_probs=60.2
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-C-cEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-Q-NIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g-~~V~L~V~R~g 76 (433)
.++|||.+.+ ..+++|..|.++|||+++||++||+|++|||+++.++++.++..+++. + ..|+|+|.|..
T Consensus 33 ~~~~G~~l~~----~~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 33 EGDLGFTLRG----NAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSLL 104 (109)
T ss_dssp GGCCCEEEES----SSSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESCC
T ss_pred CCceeEEEeC----CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEECC
Confidence 3689999975 247999999999999999999999999999999999888888888874 3 45999998643
No 197
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=9e-11 Score=95.57 Aligned_cols=65 Identities=28% Similarity=0.535 Sum_probs=57.3
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRS 74 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R 74 (433)
.++|||.+.+ | +|..|.++|+|+++||++||+|++|||+++.+.++.++..+++ .+..|.|+|.+
T Consensus 23 ~~~lG~~~~~------G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p 88 (90)
T 1y7n_A 23 RYQLGFSVQN------G-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMP 88 (90)
T ss_dssp TSCCCEEEET------T-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEEC
T ss_pred ccccCeEecC------C-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 4679999864 3 8999999999999999999999999999999888889988886 47888888864
No 198
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.14 E-value=1.2e-10 Score=99.08 Aligned_cols=69 Identities=25% Similarity=0.303 Sum_probs=61.0
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~g 76 (433)
..||||+|.++. .|.+|..|.+ +|+.+||++||+|++|||++|.+++|.+++.+|+. |..|+|+|.|.+
T Consensus 22 ~~G~GFsI~~~~---~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g 93 (113)
T 3soe_A 22 PKGFGFAIADSP---TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGG 93 (113)
T ss_dssp TTBSSEEEEEET---TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESS
T ss_pred CCcccEEEeCCC---CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECC
Confidence 469999997643 4788999988 58888999999999999999999999999999984 779999999987
No 199
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=5.5e-10 Score=96.23 Aligned_cols=76 Identities=36% Similarity=0.472 Sum_probs=66.0
Q ss_pred CCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeee
Q psy12296 118 GKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLD 194 (433)
Q Consensus 118 ~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~ 194 (433)
..|||.+.++.....|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.+..+.|+|.|++...
T Consensus 32 ~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~v~l~v~R~g~~~ 107 (128)
T 1uf1_A 32 RSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFL-NILHDEAVRLLKSSRHLILTVKDVGRLP 107 (128)
T ss_dssp CCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECS-SCCHHHHHHHHTTCSEEEEEEECCSCCS
T ss_pred CccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECC-CCCHHHHHHHHhcCCeEEEEEEECCccc
Confidence 568888876554456899999999999999999999999999999999 5556899999988899999999997653
No 200
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=6.3e-11 Score=99.56 Aligned_cols=84 Identities=26% Similarity=0.400 Sum_probs=72.7
Q ss_pred ccceEEeeCCCCCCCceeecCC---------CCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHH
Q psy12296 107 VVPITLEVPPHGKLGCGICKGP---------QWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSV 176 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~---------~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~ 176 (433)
...+.|.+.....|||.++++. ....|++|..|.++++|+++| |++||+|++|||+++. ..++.+++.+
T Consensus 10 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~-~~~~~~~~~~ 88 (111)
T 1uju_A 10 LRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLL-GLTHGEAVQL 88 (111)
T ss_dssp SSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCT-TSCHHHHHHH
T ss_pred cEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHH
Confidence 3457777777789999999875 234689999999999999999 9999999999999999 7799999999
Q ss_pred hcCC-CeEEEEEEECC
Q psy12296 177 MKSS-CLLELLVHRGV 191 (433)
Q Consensus 177 Lr~~-~~v~L~V~R~~ 191 (433)
++.. ..+.|+|.|+.
T Consensus 89 l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 89 LRSVGDTLTVLVCDGF 104 (111)
T ss_dssp HSSCSSEEEECCCCCC
T ss_pred HHcCCCeEEEEEEECC
Confidence 9875 78999998874
No 201
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=2e-10 Score=95.51 Aligned_cols=82 Identities=33% Similarity=0.528 Sum_probs=68.3
Q ss_pred ceEEeeCCCCCCCceeecCCC------CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-
Q psy12296 109 PITLEVPPHGKLGCGICKGPQ------WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS- 180 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~------~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~- 180 (433)
.+.|.+. ...|||.+.++.+ ...|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++..
T Consensus 10 ~v~l~~~-~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~l~~~g 87 (105)
T 1wha_A 10 VACLARS-ERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVT-EARHDHAVSLLTAAS 87 (105)
T ss_dssp EEEECCC-TTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCT-TCCHHHHHHHHTSCC
T ss_pred EEEEEeC-CCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCC
Confidence 3444443 3569999988653 24689999999999999999 9999999999999999 77799999999865
Q ss_pred CeEEEEEEECCe
Q psy12296 181 CLLELLVHRGVG 192 (433)
Q Consensus 181 ~~v~L~V~R~~~ 192 (433)
..+.|+|.|++.
T Consensus 88 ~~v~l~v~R~~~ 99 (105)
T 1wha_A 88 PTIALLLEREAG 99 (105)
T ss_dssp SCEEEEEEECCC
T ss_pred CeEEEEEEECCC
Confidence 789999999853
No 202
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.14 E-value=7.4e-11 Score=97.79 Aligned_cols=78 Identities=19% Similarity=0.276 Sum_probs=66.5
Q ss_pred CCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCeee
Q psy12296 116 PHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVGLD 194 (433)
Q Consensus 116 ~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~~~ 194 (433)
....|||.+.++.+...+++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.. ..+.|+|.|++...
T Consensus 13 ~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 91 (103)
T 1wf7_A 13 GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQ-GMTHLEAQNKIKACTGSLNMTLQRASAAA 91 (103)
T ss_dssp SSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECS-SCCHHHHHHHHHHCSSEEEEEECCCSCCC
T ss_pred CCCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEEeCCCcC
Confidence 45779999998776666899999999999999999999999999999999 55777887777544 78999999987543
No 203
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.14 E-value=2.5e-10 Score=91.02 Aligned_cols=77 Identities=18% Similarity=0.196 Sum_probs=63.8
Q ss_pred EEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC---CCeEEEE
Q psy12296 111 TLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS---SCLLELL 186 (433)
Q Consensus 111 ~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~~v~L~ 186 (433)
.+.+. ..+|||.+.++.....|++|..|.+++||+++| |++||+|++|||+++. ..++.++.+.++. ++.+.|+
T Consensus 5 ~l~k~-~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~l~~~~~g~~v~l~ 82 (85)
T 2i04_A 5 KLRKS-SRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVL-GHTHAQVVKIFQSIPIGASVDLE 82 (85)
T ss_dssp EEECB-TTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHHHTSCTTCEEEEE
T ss_pred EEEEC-CCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCCeEEEE
Confidence 33443 357999998766556789999999999999999 9999999999999998 7778888888765 3688888
Q ss_pred EEE
Q psy12296 187 VHR 189 (433)
Q Consensus 187 V~R 189 (433)
|.|
T Consensus 83 v~R 85 (85)
T 2i04_A 83 LCR 85 (85)
T ss_dssp EEC
T ss_pred EEC
Confidence 865
No 204
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.14 E-value=1.3e-10 Score=96.08 Aligned_cols=74 Identities=22% Similarity=0.281 Sum_probs=61.3
Q ss_pred CCeEeEEEEecCC--CCCCeEEEEeCCCCHhHh-CCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGRE--HTTGVFVSNVEPKSEAER-SGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~--~~~Gv~Vs~V~pgSpA~~-aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g 76 (433)
+.+|||+|.+... ...+++|..|.++|+|++ +||++||+|++|||+++.+.++.++..+++ .+..|+|+|.|..
T Consensus 20 g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 20 GEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHCP 99 (101)
T ss_dssp TCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 4689999985211 123799999999999999 459999999999999998888889988886 4788999998743
No 205
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.14 E-value=2.3e-10 Score=93.38 Aligned_cols=80 Identities=28% Similarity=0.442 Sum_probs=64.5
Q ss_pred EEeeCCCCCCCceeecCCC------CCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhc-CCCeE
Q psy12296 111 TLEVPPHGKLGCGICKGPQ------WKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMK-SSCLL 183 (433)
Q Consensus 111 ~L~~~~~~~LG~~l~gg~~------~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr-~~~~v 183 (433)
.+... ...|||.+.++.. ...|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++ .+..+
T Consensus 8 ~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~~~~~g~~v 85 (97)
T 2w4f_A 8 TILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQ-GAEHHEAVEALRGAGTAV 85 (97)
T ss_dssp EEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TCCHHHHHHHHHTSCSEE
T ss_pred EEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECC-CcCHHHHHHHHhCCCCeE
Confidence 33343 6789999987543 357899999999999999999999999999999999 555556666664 45899
Q ss_pred EEEEEECCe
Q psy12296 184 ELLVHRGVG 192 (433)
Q Consensus 184 ~L~V~R~~~ 192 (433)
.|+|.|++.
T Consensus 86 ~l~v~R~g~ 94 (97)
T 2w4f_A 86 QMRVWRERE 94 (97)
T ss_dssp EEEEECCSS
T ss_pred EEEEEeCCc
Confidence 999999874
No 206
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.14 E-value=5.3e-11 Score=100.88 Aligned_cols=86 Identities=34% Similarity=0.472 Sum_probs=70.0
Q ss_pred cceEEeeCCCCCCCceeecCCC---CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-Ce
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ---WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CL 182 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~---~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~ 182 (433)
..+.|.+.....|||.+.++.. ...|++|..|.++++|+++| |++||+|++|||+++.+..++.+++..++.. ..
T Consensus 22 ~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~ 101 (117)
T 2o2t_A 22 EVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAKDT 101 (117)
T ss_dssp EEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCCSE
T ss_pred EEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCE
Confidence 3455566556789999887542 24589999999999999999 9999999999999996467888888887654 79
Q ss_pred EEEEEEECCee
Q psy12296 183 LELLVHRGVGL 193 (433)
Q Consensus 183 v~L~V~R~~~~ 193 (433)
+.|+|.|++..
T Consensus 102 v~l~v~R~~~~ 112 (117)
T 2o2t_A 102 VQLVIARGSLP 112 (117)
T ss_dssp EEEEEESSCCG
T ss_pred EEEEEEeCCcc
Confidence 99999998754
No 207
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.14 E-value=1.4e-10 Score=100.98 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=71.5
Q ss_pred ccceEEeeCCCCCCCceeecCCCC------------CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHH
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQW------------KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAV 174 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~~------------~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav 174 (433)
...+.|.+....+|||.|.++... ..|++|..|.++++|+++||++||+|++|||+++. ..++.+++
T Consensus 28 ~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~-~~~~~~~~ 106 (132)
T 3l4f_D 28 EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVV-KVGHRQVV 106 (132)
T ss_dssp CCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCT-TSCHHHHH
T ss_pred CEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHH
Confidence 346777777778999999886532 23799999999999999999999999999999999 88899999
Q ss_pred HHhcCC-CeEEEEEEECC
Q psy12296 175 SVMKSS-CLLELLVHRGV 191 (433)
Q Consensus 175 ~~Lr~~-~~v~L~V~R~~ 191 (433)
..++.. ..+.|+|.|..
T Consensus 107 ~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 107 NMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp HHHHHTTTEEEEEEECCC
T ss_pred HHHHcCCCEEEEEEEECC
Confidence 998864 78999998875
No 208
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.13 E-value=1.5e-10 Score=98.21 Aligned_cols=84 Identities=25% Similarity=0.376 Sum_probs=71.6
Q ss_pred cceEEeeCCCCCCCceeecCCCC---------CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHh
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQW---------KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVM 177 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~---------~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~L 177 (433)
..+.|.+.....|||.+.++... ..|++|..|.++++|+++| |++||+|++|||+++. ..++.+++..+
T Consensus 17 ~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~-~~~~~~~~~~~ 95 (117)
T 2ehr_A 17 RIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQ-NASHSEAVEAI 95 (117)
T ss_dssp EEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCT-TCCHHHHHHHH
T ss_pred EEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHH
Confidence 45667776678899999887532 3699999999999999999 9999999999999999 77899999998
Q ss_pred cCC-CeEEEEEEECCe
Q psy12296 178 KSS-CLLELLVHRGVG 192 (433)
Q Consensus 178 r~~-~~v~L~V~R~~~ 192 (433)
+.. ..+.|+|.|...
T Consensus 96 ~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 96 KNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HTSCSSEEEEECCBSC
T ss_pred HcCCCeEEEEEEECCC
Confidence 875 789999987643
No 209
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.13 E-value=7.1e-11 Score=102.41 Aligned_cols=83 Identities=19% Similarity=0.261 Sum_probs=71.0
Q ss_pred ccceEEeeCCCCCCCceeecCCC---CCCceEEEEECCCChhhhc-CCCCCCEEEEEccEecCChhhHHHHHHHhcCC--
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQ---WKPGIFVQFTKDACVAKDA-GLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-- 180 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~---~~~GV~V~~V~~gspA~~a-GL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-- 180 (433)
...+.|.+. ..+|||.|.++.+ ...+++|..|.++++|+++ ||++||+|++|||+++. ..+|++++++|+..
T Consensus 30 ~~~v~l~k~-~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~ 107 (130)
T 1i16_A 30 VCTVTLEKM-SAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQ-GLTRFEAWNIIKALPD 107 (130)
T ss_dssp EEEEEEETT-SSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGG-GSCHHHHHHHHHTSCS
T ss_pred EEEEEEEcC-CCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCC
Confidence 344566654 5789999998765 3568999999999999999 89999999999999999 88999999999886
Q ss_pred CeEEEEEEECC
Q psy12296 181 CLLELLVHRGV 191 (433)
Q Consensus 181 ~~v~L~V~R~~ 191 (433)
..+.|+|.|..
T Consensus 108 ~~v~l~v~r~~ 118 (130)
T 1i16_A 108 GPVTIVIRRKS 118 (130)
T ss_dssp SEEEEEEEEES
T ss_pred ceEEEEEEeCC
Confidence 56999998874
No 210
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.13 E-value=9.1e-11 Score=98.26 Aligned_cols=82 Identities=22% Similarity=0.263 Sum_probs=69.9
Q ss_pred cceEEeeCCCCCCCceeecCCC----CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC--
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ----WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-- 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~----~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-- 180 (433)
..+.|.+.. ..|||.+.++.+ ...|++|..|.+++||+++| |++||+|++|||+++. ..++.+++.+++..
T Consensus 17 ~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~ 94 (108)
T 2d92_A 17 KIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLD-NTSLAEAVEILKAVPP 94 (108)
T ss_dssp EEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCT-TCCHHHHHHHHHHSCS
T ss_pred EEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCC
Confidence 456777764 689999987533 35689999999999999999 9999999999999998 78999999999874
Q ss_pred CeEEEEEEECC
Q psy12296 181 CLLELLVHRGV 191 (433)
Q Consensus 181 ~~v~L~V~R~~ 191 (433)
..+.|+|.|..
T Consensus 95 ~~v~l~v~R~~ 105 (108)
T 2d92_A 95 GLVHLGICSGP 105 (108)
T ss_dssp EEEEEEEECCC
T ss_pred CeEEEEEEcCC
Confidence 58999998873
No 211
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.13 E-value=1.8e-10 Score=93.90 Aligned_cols=73 Identities=33% Similarity=0.469 Sum_probs=62.3
Q ss_pred CCCCCceeecCCC--------CCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEEE
Q psy12296 117 HGKLGCGICKGPQ--------WKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELLV 187 (433)
Q Consensus 117 ~~~LG~~l~gg~~--------~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~V 187 (433)
...|||.++++.. ...|++|..|.+++||++ ||++||+|++|||+++. ..++.+++..++. ...+.|+|
T Consensus 12 ~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l~v 89 (95)
T 1mfg_A 12 DPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFI-NIEHGQAVSLLKTFQNTVELII 89 (95)
T ss_dssp SSSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECT-TCBHHHHHHHHHHCCSEEEEEE
T ss_pred CCCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcC-CCCHHHHHHHhhcCCCeEEEEE
Confidence 3479999987642 346999999999999999 99999999999999999 7778888888765 48899999
Q ss_pred EECC
Q psy12296 188 HRGV 191 (433)
Q Consensus 188 ~R~~ 191 (433)
.|+.
T Consensus 90 ~R~~ 93 (95)
T 1mfg_A 90 VREV 93 (95)
T ss_dssp EEEC
T ss_pred EeCC
Confidence 9873
No 212
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.13 E-value=1.7e-10 Score=95.99 Aligned_cols=77 Identities=26% Similarity=0.375 Sum_probs=66.3
Q ss_pred CCCCCCCceeecCC---CCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEE
Q psy12296 115 PPHGKLGCGICKGP---QWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHR 189 (433)
Q Consensus 115 ~~~~~LG~~l~gg~---~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R 189 (433)
.....|||.+.++. ....|++|..|.++|+|+++| |++||+|++|||+++. ..++.+++..++.. ..+.|+|.|
T Consensus 18 ~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~-~~~~~~~~~~~~~~g~~v~l~v~R 96 (106)
T 3axa_A 18 KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLV-GLSQERAAELMTRTSSVVTLEVAK 96 (106)
T ss_dssp ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHHHTCCSEEEEEEEC
T ss_pred CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEEe
Confidence 45678999997642 234689999999999999999 9999999999999999 78899999988765 789999999
Q ss_pred CCe
Q psy12296 190 GVG 192 (433)
Q Consensus 190 ~~~ 192 (433)
++.
T Consensus 97 ~~~ 99 (106)
T 3axa_A 97 QGA 99 (106)
T ss_dssp CCS
T ss_pred CCc
Confidence 864
No 213
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=9.9e-11 Score=96.60 Aligned_cols=76 Identities=34% Similarity=0.464 Sum_probs=66.2
Q ss_pred CCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCe
Q psy12296 116 PHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVG 192 (433)
Q Consensus 116 ~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~ 192 (433)
....|||.+.++.+...|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++....+.|+|.|++.
T Consensus 19 ~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 19 AHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLA-RVTHAEAVKALKGSKKLVLSVYSAGR 94 (101)
T ss_dssp TTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECS-SCCHHHHHHHSSSSSSCCEEECCCCC
T ss_pred CCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CcCHHHHHHhhcCCCeEEEEEEECCc
Confidence 35689999987765567999999999999999999999999999999999 55667888888877889999999864
No 214
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=1.4e-10 Score=98.87 Aligned_cols=83 Identities=29% Similarity=0.455 Sum_probs=70.3
Q ss_pred cceEEeeCCCCCCCceeecCCCC-----CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC-C
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQW-----KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS-S 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~-----~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~ 180 (433)
..+.|.+.. ..|||.+.++.+. ..|++|..|.++++|+++| |++||+|++|||+++. ..++.+++..++. .
T Consensus 19 ~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~-~~~~~~~~~~~~~~g 96 (120)
T 2eno_A 19 EEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLK-NLLHQDAVDLFRNAG 96 (120)
T ss_dssp EEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECC-SCCHHHHHHHHHHHC
T ss_pred EEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCC
Confidence 445666655 7899999986543 5699999999999999999 9999999999999999 7778899888875 4
Q ss_pred CeEEEEEEECCe
Q psy12296 181 CLLELLVHRGVG 192 (433)
Q Consensus 181 ~~v~L~V~R~~~ 192 (433)
..+.|+|.|++.
T Consensus 97 ~~v~l~v~R~~~ 108 (120)
T 2eno_A 97 YAVSLRVQHRLQ 108 (120)
T ss_dssp SEEEEEEEEEEE
T ss_pred CeEEEEEEeCCc
Confidence 789999999864
No 215
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=1.4e-10 Score=96.12 Aligned_cols=84 Identities=21% Similarity=0.265 Sum_probs=68.9
Q ss_pred ccceEEeeCCCCCCCceeecCCCC--CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC-CCe
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQW--KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCL 182 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~~--~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~ 182 (433)
...+.|.... ..|||.+.++.+. ..+++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++. ...
T Consensus 12 ~~~v~l~~~~-~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~~~~~g~~ 89 (104)
T 2djt_A 12 HFSVELVRGY-AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQ-GLTHAQAVERIRAGGPQ 89 (104)
T ss_dssp CEEEEEECCS-SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECT-TCCHHHHHHHHHHTCSE
T ss_pred eEEEEEEeCC-CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCe
Confidence 3455555544 6799999875432 4689999999999999999 9999999999999999 6678888888775 488
Q ss_pred EEEEEEECCe
Q psy12296 183 LELLVHRGVG 192 (433)
Q Consensus 183 v~L~V~R~~~ 192 (433)
+.|+|.|++.
T Consensus 90 v~l~v~R~g~ 99 (104)
T 2djt_A 90 LHLVIRRPLS 99 (104)
T ss_dssp EEEEECCCCC
T ss_pred EEEEEEECCC
Confidence 9999999864
No 216
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=1.8e-10 Score=97.35 Aligned_cols=86 Identities=21% Similarity=0.215 Sum_probs=70.0
Q ss_pred ccceEEeeCCCCCCCceeecCCCC-------CCceEEEEECCCChhhh-cCCCCCCEEEEEccEecCChhhHHHHHHHhc
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQW-------KPGIFVQFTKDACVAKD-AGLKCGDQILACNGVKFSPDVTFEHAVSVMK 178 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~~-------~~GV~V~~V~~gspA~~-aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr 178 (433)
...+.+.+.....|||.|.++... ..+++|..|.+++||++ +||++||+|++|||+++. ..++.+++++|+
T Consensus 11 ~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~-~~~~~~~~~~l~ 89 (114)
T 1uew_A 11 TSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSII-NMPHADIVKLIK 89 (114)
T ss_dssp CEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTT-TSCHHHHHHHHH
T ss_pred ceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECC-CCCHHHHHHHHH
Confidence 345667776678899999875321 12679999999999999 999999999999999999 666888888876
Q ss_pred CC-CeEEEEEEECCee
Q psy12296 179 SS-CLLELLVHRGVGL 193 (433)
Q Consensus 179 ~~-~~v~L~V~R~~~~ 193 (433)
.. ..+.|+|.|++..
T Consensus 90 ~~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 90 DAGLSVTLRIIPQEEL 105 (114)
T ss_dssp HTTTEEEEEECCCSCC
T ss_pred cCCCeEEEEEEeCCcC
Confidence 54 8999999998754
No 217
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=3.1e-11 Score=99.76 Aligned_cols=69 Identities=32% Similarity=0.386 Sum_probs=60.4
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
.+|||.+.+. .+++|..|.++|||+++||++||+|++|||+++.++++.++..+++. +..|.|+|.|..
T Consensus 26 ~g~G~~~~~~----~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 95 (100)
T 1whd_A 26 DGFGFTICCD----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRVS 95 (100)
T ss_dssp SSSSCBCCCS----SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEECC
T ss_pred CeeeEEEeCC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 5788887752 57999999999999999999999999999999999988888888864 567999998875
No 218
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=6.4e-11 Score=97.86 Aligned_cols=82 Identities=20% Similarity=0.265 Sum_probs=67.9
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhc-CCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDA-GLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~a-GL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
.+.+.+.....|||.+.++.+...+++|..|.+++||+++ ||++||+|++|||+++.+ . +.+++..++.. ..+.|+
T Consensus 12 ~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~-~-~~~~~~~~~~~~~~v~l~ 89 (100)
T 2edp_A 12 YVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYG-S-RQEALILIKGSFRILKLI 89 (100)
T ss_dssp EEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCS-C-SHHHHHHHHTCCSSCEEE
T ss_pred EEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccc-h-HHHHHHHHHhCCCeEEEE
Confidence 3444555556899999876554568999999999999999 999999999999999994 4 78888888765 789999
Q ss_pred EEECCe
Q psy12296 187 VHRGVG 192 (433)
Q Consensus 187 V~R~~~ 192 (433)
|.|++.
T Consensus 90 v~R~~~ 95 (100)
T 2edp_A 90 VRRRNS 95 (100)
T ss_dssp EEECCC
T ss_pred EEeCCC
Confidence 999874
No 219
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=3.5e-11 Score=101.04 Aligned_cols=73 Identities=30% Similarity=0.525 Sum_probs=64.4
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..+|||+|.++.+ ..|++|..|.++|+|+++| |++||+|++|||+++.++++.++..+++. +..+.|+|.|.+
T Consensus 25 ~~glG~~l~~~~~-~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 99 (113)
T 1um7_A 25 STGLGFNIVGGED-GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRP 99 (113)
T ss_dssp SSCSSBCCBCCST-TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEEEEEECCH
T ss_pred CCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECc
Confidence 3689999998654 5789999999999999999 99999999999999999988888877764 788999998765
No 220
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=4.2e-11 Score=99.41 Aligned_cols=83 Identities=23% Similarity=0.261 Sum_probs=69.9
Q ss_pred eCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCe
Q psy12296 114 VPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVG 192 (433)
Q Consensus 114 ~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~ 192 (433)
......|||.+.++.+...+++|..|.+++||+++||++||+|++|||+++. ..++.++++.++.. +.+.|+|.|++.
T Consensus 11 ~~~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 11 LPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTE-SMTHADAQDRIKAASYQLCLKIDRAET 89 (103)
T ss_dssp EESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECS-SCCHHHHHHHHTTCCSEEECEECCCTT
T ss_pred EcCCCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEEEEEECCe
Confidence 3455689999987665456899999999999999999999999999999999 56688898888774 899999999986
Q ss_pred eeeec
Q psy12296 193 LDLFP 197 (433)
Q Consensus 193 ~~~~~ 197 (433)
..+.+
T Consensus 90 ~~~~~ 94 (103)
T 1v5l_A 90 RLWSP 94 (103)
T ss_dssp TTSCS
T ss_pred EccCC
Confidence 54444
No 221
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=5.1e-10 Score=93.72 Aligned_cols=82 Identities=28% Similarity=0.474 Sum_probs=67.2
Q ss_pred ceEEeeCCCCCCCceeecCCC------CCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CC
Q psy12296 109 PITLEVPPHGKLGCGICKGPQ------WKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SC 181 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~------~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~ 181 (433)
.+.+... ...|||.+.++.. ...|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++. +.
T Consensus 18 ~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~~~~~g~ 95 (110)
T 1x5q_A 18 TLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQ-GAEHHEAVEALRGAGT 95 (110)
T ss_dssp EEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TCCHHHHHHHHHSCCS
T ss_pred EEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CcCHHHHHHHhhCCCC
Confidence 3444443 6789999987643 357899999999999999999999999999999999 6667777777664 58
Q ss_pred eEEEEEEECCe
Q psy12296 182 LLELLVHRGVG 192 (433)
Q Consensus 182 ~v~L~V~R~~~ 192 (433)
.+.|+|.|++.
T Consensus 96 ~v~l~v~R~g~ 106 (110)
T 1x5q_A 96 AVQMRVWRESG 106 (110)
T ss_dssp EEEEEEEECSS
T ss_pred eEEEEEEECCc
Confidence 99999999874
No 222
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=3.8e-10 Score=94.47 Aligned_cols=87 Identities=26% Similarity=0.417 Sum_probs=71.4
Q ss_pred cceEEeeCCCCCCCceeecCCC---CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-Ce
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ---WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CL 182 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~---~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~ 182 (433)
..+.|.+.. ..|||.+.++.. ...|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. ..
T Consensus 10 ~~v~l~~~~-~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~ 87 (110)
T 1um1_A 10 FTVELERGP-SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLL-GLGYLRAVDLIRHGGKK 87 (110)
T ss_dssp EEEEEECCT-TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCS-SCCHHHHHHHHHTCCSE
T ss_pred EEEEEEECC-CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCe
Confidence 345555544 679999987643 24689999999999999999 9999999999999998 77889999888765 78
Q ss_pred EEEEEEECCeeeee
Q psy12296 183 LELLVHRGVGLDLF 196 (433)
Q Consensus 183 v~L~V~R~~~~~~~ 196 (433)
+.|+|.|++....+
T Consensus 88 v~l~v~R~~~~~~~ 101 (110)
T 1um1_A 88 MRFLVAKSDVETAK 101 (110)
T ss_dssp EEEEEECCCHHHHH
T ss_pred EEEEEEeCCcceeE
Confidence 99999999765433
No 223
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.12 E-value=1.3e-10 Score=99.90 Aligned_cols=73 Identities=30% Similarity=0.522 Sum_probs=63.8
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~V~R~g 76 (433)
..+|||.|.++.+ ..|++|..|.++|+|+++||++||+|++|||+++.++++.++..+++. +..+.|+|.|.+
T Consensus 19 ~~g~G~~l~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g 93 (128)
T 2kjd_A 19 PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRET 93 (128)
T ss_dssp SSSCCEEEEECSS-SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHHH
T ss_pred CCcccEEEEecCC-CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeCC
Confidence 3689999998543 459999999999999999999999999999999999888888888875 567889998876
No 224
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.11 E-value=8.4e-11 Score=102.21 Aligned_cols=79 Identities=27% Similarity=0.383 Sum_probs=66.8
Q ss_pred EeeCCCCCCCceeecCCCC---CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC---CeEE
Q psy12296 112 LEVPPHGKLGCGICKGPQW---KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS---CLLE 184 (433)
Q Consensus 112 L~~~~~~~LG~~l~gg~~~---~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~---~~v~ 184 (433)
+.+.....|||.+.++... ..|++|..|.++++|+++| |++||+|++|||+++. ..++++++++|+.. ..+.
T Consensus 42 i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~-~~~~~~~~~~l~~~~~g~~v~ 120 (131)
T 1wfg_A 42 VPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQ-GATFEEVYNIILESKPEPQVE 120 (131)
T ss_dssp CCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECT-TCCHHHHHHHHHHTSSSSEEE
T ss_pred EecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhcCCCCEEE
Confidence 3344677899999875432 3489999999999999999 9999999999999998 77889998888654 7899
Q ss_pred EEEEECC
Q psy12296 185 LLVHRGV 191 (433)
Q Consensus 185 L~V~R~~ 191 (433)
|+|.|++
T Consensus 121 l~v~R~g 127 (131)
T 1wfg_A 121 LVVSRSG 127 (131)
T ss_dssp EEEEEEC
T ss_pred EEEEcCC
Confidence 9999975
No 225
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.11 E-value=2.7e-10 Score=92.68 Aligned_cols=77 Identities=21% Similarity=0.316 Sum_probs=65.3
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVH 188 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~ 188 (433)
.+.+.+. ...|||.+.+ ..|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.+..+.|+|.
T Consensus 11 ~v~l~~~-~~~~G~~l~~----~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~~~~g~~v~l~v~ 84 (93)
T 2dls_A 11 CVIIQKD-QHGFGFTVSG----DRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVT-NSSHLEVVKLIKSGAYVALTLL 84 (93)
T ss_dssp EEEEECS-SSSCCEEEEC----SSSCEEEEECSSSTTTTTTCCSSCEEEEETTEECS-SSCHHHHHHHHTSSSEEEEEEE
T ss_pred EEEEEeC-CCceeEEEeC----CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHhhcCCCEEEEEEE
Confidence 4455443 4678998864 46899999999999999999999999999999999 6666789999988899999999
Q ss_pred ECC
Q psy12296 189 RGV 191 (433)
Q Consensus 189 R~~ 191 (433)
|++
T Consensus 85 R~~ 87 (93)
T 2dls_A 85 GSS 87 (93)
T ss_dssp CCC
T ss_pred ECC
Confidence 985
No 226
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.11 E-value=1.6e-10 Score=94.46 Aligned_cols=81 Identities=23% Similarity=0.371 Sum_probs=66.3
Q ss_pred eEEeeCCCCCCCceeecCCC----CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeE
Q psy12296 110 ITLEVPPHGKLGCGICKGPQ----WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLL 183 (433)
Q Consensus 110 v~L~~~~~~~LG~~l~gg~~----~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v 183 (433)
+.+.+ ....|||.+.++.+ ...|++|..|.+++||+++| |++||+|++|||+++. ..++.++.+.++. +..+
T Consensus 7 v~l~k-~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g~~v 84 (97)
T 2jil_A 7 VTLHK-EGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLL-GTTHAEAMSILKQCGQEA 84 (97)
T ss_dssp EEEEC-BTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECS-SCCHHHHHHHHHHSCSEE
T ss_pred EEEEe-CCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeE
Confidence 34444 34689999987643 24689999999999999999 9999999999999999 6668888888775 4899
Q ss_pred EEEEEECCe
Q psy12296 184 ELLVHRGVG 192 (433)
Q Consensus 184 ~L~V~R~~~ 192 (433)
.|+|.|++.
T Consensus 85 ~l~v~R~~~ 93 (97)
T 2jil_A 85 ALLIEYDVS 93 (97)
T ss_dssp EEEEEEECC
T ss_pred EEEEEeCCC
Confidence 999999864
No 227
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.11 E-value=1.2e-10 Score=100.39 Aligned_cols=83 Identities=30% Similarity=0.418 Sum_probs=69.1
Q ss_pred ceEEeeCCCCCCCceeecCCCC---CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQW---KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLL 183 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~---~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v 183 (433)
.+.+.+.....|||.+.++... ..|++|..|.++++|+++| |++||+|++|||+++.+..++.+++.+++.. ..+
T Consensus 28 ~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v 107 (128)
T 2db5_A 28 YIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSL 107 (128)
T ss_dssp EEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCCSEE
T ss_pred EEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCeE
Confidence 4555555567899999775432 3489999999999999999 9999999999999995478899999988754 789
Q ss_pred EEEEEECC
Q psy12296 184 ELLVHRGV 191 (433)
Q Consensus 184 ~L~V~R~~ 191 (433)
.|+|.|+.
T Consensus 108 ~l~v~r~~ 115 (128)
T 2db5_A 108 RLIVAREP 115 (128)
T ss_dssp EEEEEECC
T ss_pred EEEEEcCC
Confidence 99999985
No 228
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=1.5e-10 Score=98.25 Aligned_cols=84 Identities=20% Similarity=0.280 Sum_probs=70.0
Q ss_pred cceEEeeCCCCCCCceeecCCC------CCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ------WKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS- 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~------~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~- 180 (433)
..+.|.+.....|||.+.++.+ ...|++|..|.++++|+ +||++||+|++|||+++. ..++.+++..++..
T Consensus 16 ~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~-~~~~~~~~~~l~~~~ 93 (117)
T 2csj_A 16 YTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPME-DVLHSFAVQQLRKSG 93 (117)
T ss_dssp EEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCB-TCCHHHHHHHHHHSC
T ss_pred EEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECC-CcCHHHHHHHHhcCC
Confidence 3455666666889999998754 25689999999999997 899999999999999998 77888998888754
Q ss_pred CeEEEEEEECCee
Q psy12296 181 CLLELLVHRGVGL 193 (433)
Q Consensus 181 ~~v~L~V~R~~~~ 193 (433)
..+.|+|.|.+..
T Consensus 94 ~~v~l~v~R~~~~ 106 (117)
T 2csj_A 94 KIAAIVVKRPRKV 106 (117)
T ss_dssp SEEEEEEEEEEEC
T ss_pred CeEEEEEEECCcc
Confidence 8999999997543
No 229
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.11 E-value=3.2e-10 Score=94.36 Aligned_cols=84 Identities=23% Similarity=0.281 Sum_probs=66.8
Q ss_pred cceEEeeCCCCCCCceeecCCC------CCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhc-CC
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ------WKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMK-SS 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~------~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr-~~ 180 (433)
..+.|.+.+...|||.+.++.+ ...|++|..|.+++||+ +||++||+|++|||+++. ..+..+++..++ .+
T Consensus 9 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~-~~~~~~~~~~~~~~g 86 (107)
T 2h2b_A 9 HTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMD-NVEHAFAVQQLRKSG 86 (107)
T ss_dssp EEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECT-TCCHHHHHHHHHTCC
T ss_pred EEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECC-CccHHHHHHHhhCCC
Confidence 3456666667889999987654 24599999999999999 999999999999999999 555555555544 45
Q ss_pred CeEEEEEEECCee
Q psy12296 181 CLLELLVHRGVGL 193 (433)
Q Consensus 181 ~~v~L~V~R~~~~ 193 (433)
..+.|+|.|++..
T Consensus 87 ~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 87 KNAKITIRRKKGG 99 (107)
T ss_dssp SEEEEEEEEESCC
T ss_pred CEEEEEEEECCCC
Confidence 8999999998753
No 230
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=6.8e-11 Score=100.67 Aligned_cols=71 Identities=27% Similarity=0.415 Sum_probs=61.8
Q ss_pred eEeEEEEecCCCC-CCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcC
Q psy12296 5 TLGFSIRGGREHT-TGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVG 76 (433)
Q Consensus 5 gLGfsI~gG~~~~-~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g 76 (433)
+|||+|.+..+.. .|++|..|.++|||+++||++||+|++|||+++.++++.++..+++. ..+.|+|.|..
T Consensus 30 ~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~-~~v~l~v~R~p 101 (114)
T 2d8i_A 30 TYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ-PSLGLLVRTYP 101 (114)
T ss_dssp CCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS-SEEEEEEEECC
T ss_pred ccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC-CcEEEEEEECC
Confidence 6999998743322 58999999999999999999999999999999999887888888875 58999998865
No 231
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.10 E-value=1.7e-10 Score=95.84 Aligned_cols=85 Identities=21% Similarity=0.284 Sum_probs=70.3
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELLV 187 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~V 187 (433)
.+.+.+.....+||.+..+.. ..|++|..|.++|||+++||++||+|++|||+++. ..++.+++..++. +..+.|+|
T Consensus 4 ~v~l~~~~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g~~v~l~v 81 (106)
T 3ngh_A 4 ESKLSKQEGQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVD-KEEHAQVVELVRKSGNSVTLLV 81 (106)
T ss_dssp EEEEECCTTCCCCCEEECCTT-CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECT-TSCHHHHHHHHHHTTTEEEEEE
T ss_pred EEEEEeCCCCeeCEEEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCEEEEEE
Confidence 355666666789999876543 46899999999999999999999999999999999 7778888888854 48999999
Q ss_pred EECCeeee
Q psy12296 188 HRGVGLDL 195 (433)
Q Consensus 188 ~R~~~~~~ 195 (433)
.|++....
T Consensus 82 ~r~~~~~~ 89 (106)
T 3ngh_A 82 LDGDSYEK 89 (106)
T ss_dssp ECHHHHHH
T ss_pred EECCeeee
Confidence 99876543
No 232
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=2.2e-11 Score=104.98 Aligned_cols=59 Identities=32% Similarity=0.492 Sum_probs=54.7
Q ss_pred CCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 18 TGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 18 ~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
.|++|..|.++|||+++||++||+|++|||+++.++++.+++.+++. +..|.|+|.|.+
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKD 120 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 67999999999999999999999999999999999899999998875 789999998876
No 233
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.10 E-value=1.8e-10 Score=106.26 Aligned_cols=86 Identities=21% Similarity=0.342 Sum_probs=75.7
Q ss_pred ccceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEE
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELL 186 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~ 186 (433)
...+.+.+....+|||.+.++.....|++|..|.++|+|+++||++||+|++|||+++. ..++.+++..++.+..+.|+
T Consensus 85 ~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~-~~~~~~~~~~l~~~~~v~l~ 163 (192)
T 3k1r_A 85 LKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSIS-SCTHEEVINLIRTEKTVSIK 163 (192)
T ss_dssp CEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECT-TCCHHHHHHHHTSSSEEEEE
T ss_pred eEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHcCCCeEEEE
Confidence 34567777767899999987655556899999999999999999999999999999999 77899999999888899999
Q ss_pred EEECCee
Q psy12296 187 VHRGVGL 193 (433)
Q Consensus 187 V~R~~~~ 193 (433)
|.|++..
T Consensus 164 v~r~g~~ 170 (192)
T 3k1r_A 164 VRHIGLI 170 (192)
T ss_dssp EEECCEE
T ss_pred EEECCcc
Confidence 9999863
No 234
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=99.09 E-value=6.5e-10 Score=113.30 Aligned_cols=172 Identities=13% Similarity=0.147 Sum_probs=110.7
Q ss_pred CCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC--CeEEEEEEECCe---
Q psy12296 118 GKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLLELLVHRGVG--- 192 (433)
Q Consensus 118 ~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v~L~V~R~~~--- 192 (433)
.++|+.+........+++|..|.+++||+++||++||+|++|||+++. ..+..++...++.. ..+.|+|.|++.
T Consensus 85 ~giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~-~~~~~~~~~~l~~~~g~~v~l~v~r~g~~~~ 163 (388)
T 1fc6_A 85 TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVK-GMSLYDVSDLLQGEADSQVEVVLHAPGAPSN 163 (388)
T ss_dssp BBCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECT-TCCHHHHHHHHCBSTTCEEEEEEEETTEEEE
T ss_pred EEEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHhcCCCCEEEEEEEeCCCCcc
Confidence 456776643201136899999999999999999999999999999999 66677888888753 789999999987
Q ss_pred eeeecCCCCCCCCC-CCCCCC----CCCCCCccccccceeeEEeeecCCCCC---------------------------c
Q psy12296 193 LDLFPGGSSGYNSS-TSSLNG----DNQDEPTLVQFKRLSVVKEESVGNGRS---------------------------N 240 (433)
Q Consensus 193 ~~~~~~~~~~~~~s-~ss~~~----~~~~sP~~~~~~r~~~l~~~sf~~~~~---------------------------~ 240 (433)
...+...+..+... .....- ...+. .-...+++.|+++.+|..+.. .
T Consensus 164 ~~~~~l~r~~i~~~~v~~~~~~~~~~~~~~-~~~~~~~igYi~i~~F~~~~~~~~~~~l~~l~~~~~~~lIlDLR~N~GG 242 (388)
T 1fc6_A 164 TRTLQLTRQKVTINPVTFTTCSNVAAAALP-PGAAKQQLGYVRLATFNSNTTAAAQQAFTELSKQGVAGLVLDIRNNGGG 242 (388)
T ss_dssp EEEEEEECBCCCCCCEEEEEECSCCGGGSC-TTCSSSCEEEEEECCBSTTHHHHHHHHHHHHHHTTCSEEEEECTTCCCB
T ss_pred eEEEEEEEceeecCceeeeeeccccccccc-cccCCCCEEEEEeCccCcchHHHHHHHHHHHHhCCCCeEEEEcCCCCCC
Confidence 33232211111000 000000 00000 001126889999999976321 0
Q ss_pred c------hhH-Hhhh------------------------cCCceeecCCCCCCchhHHHhHHhhh-ccccccCCCccccc
Q psy12296 241 S------LED-VTQA------------------------RAEPRTLHNGGGGASLSSAISEEIKR-RSERLNSGKEFVKV 288 (433)
Q Consensus 241 ~------l~~-~~~~------------------------~~~~~~l~~~ggg~s~s~~v~~~l~~-~~~~~~~~~~f~~~ 288 (433)
. +.. ++.. .....+++.|++++|+|++++++|++ .+.+++++.+|+++
T Consensus 243 ~~~~~~~~~~~f~~~~~i~~~~~r~~~~~~~~~~~~~~~~~~pv~VLvn~~taSasEi~a~al~~~~~~~~vG~~T~Gkg 322 (388)
T 1fc6_A 243 LFPAGVNVARMLVDRGDLVLIADSQGIRDIYSADGNSIDSATPLVVLVNRGTASASEVLAGALKDSKRGLIAGERTFGKG 322 (388)
T ss_dssp CHHHHHHHHHHHCSSSEEEEEEETTEEEEEEECCSCCSCSSSCEEEEECTTCCTHHHHHHHHHHHTTSEEEEESCCCCCC
T ss_pred CHHHHHHHHHHHcCCCcEEEEecCCCceeEEecCCccccCCCCEEEEeCCCCccHHHHHHHHHhhCCCEEEEeecCCCCC
Confidence 0 000 0000 01123677888999999999999998 67888899999998
Q ss_pred ccc
Q psy12296 289 ETT 291 (433)
Q Consensus 289 ~~~ 291 (433)
.++
T Consensus 323 ~~~ 325 (388)
T 1fc6_A 323 LIQ 325 (388)
T ss_dssp EEE
T ss_pred eee
Confidence 776
No 235
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.09 E-value=3.4e-10 Score=94.40 Aligned_cols=83 Identities=22% Similarity=0.281 Sum_probs=67.9
Q ss_pred ceEEe-eCCCCCCCceeecCCC-----CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC-C
Q psy12296 109 PITLE-VPPHGKLGCGICKGPQ-----WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS-S 180 (433)
Q Consensus 109 ~v~L~-~~~~~~LG~~l~gg~~-----~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~ 180 (433)
.+.+. ......|||.+.++.+ ...|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++. +
T Consensus 15 ~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~l~~~g 93 (108)
T 2jre_A 15 SVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQ-GMAQSDVVEVLRNAG 93 (108)
T ss_dssp EEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECT-TSCHHHHHHHHHHHC
T ss_pred EEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCC
Confidence 34443 3566789999987543 24589999999999999999 9999999999999999 6678888888764 4
Q ss_pred CeEEEEEEECCe
Q psy12296 181 CLLELLVHRGVG 192 (433)
Q Consensus 181 ~~v~L~V~R~~~ 192 (433)
..+.|+|.|++.
T Consensus 94 ~~v~l~v~R~~~ 105 (108)
T 2jre_A 94 NPVRLLLIRRLP 105 (108)
T ss_dssp SEEEEEEEECCC
T ss_pred CeEEEEEEeCCc
Confidence 789999999864
No 236
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.09 E-value=4.3e-10 Score=92.12 Aligned_cols=81 Identities=17% Similarity=0.183 Sum_probs=66.7
Q ss_pred ccceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEE
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLE 184 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~ 184 (433)
...+.+.+.....||+.+.. ...|++|..|.++|||+++| |++||+|++|||+++. ..++.+++..++.. ..+.
T Consensus 9 ~~~v~l~~~~~~glG~~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~-~~~~~~~~~~~~~~~~~v~ 84 (96)
T 2qkv_A 9 KFNVDLMKKAGKELGLSLSP---NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALE-GLPFQVSYALFKGANGKVS 84 (96)
T ss_dssp CEEEEEECBTTBCCCEEEEE---CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECT-TCCHHHHHHHHHTCSSEEE
T ss_pred eEEEEEEeCCCCCccEEEEe---CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECC-CCCHHHHHHHHhcCCCcEE
Confidence 34455555566778998765 24689999999999999999 9999999999999998 66788888887765 7899
Q ss_pred EEEEECC
Q psy12296 185 LLVHRGV 191 (433)
Q Consensus 185 L~V~R~~ 191 (433)
|+|.|..
T Consensus 85 l~v~R~~ 91 (96)
T 2qkv_A 85 MEVTRPK 91 (96)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9999863
No 237
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=7.3e-11 Score=97.43 Aligned_cols=83 Identities=29% Similarity=0.462 Sum_probs=68.0
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~ 186 (433)
.+.+... ...|||.+.++.+...|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++. +..+.|+
T Consensus 14 ~v~l~~~-~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~~~~~g~~v~l~ 91 (103)
T 1wfv_A 14 TVDMEKG-AKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTR-DMTHARAIELIKSGGRRVRLL 91 (103)
T ss_dssp ECCEECC-TTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECS-SCCHHHHHHHHHHHCSEECEE
T ss_pred EEEEecC-CCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEE
Confidence 3444443 356999998765545689999999999999999 9999999999999999 6678888888874 4789999
Q ss_pred EEECCee
Q psy12296 187 VHRGVGL 193 (433)
Q Consensus 187 V~R~~~~ 193 (433)
|.|++..
T Consensus 92 v~R~~~~ 98 (103)
T 1wfv_A 92 LKRGTGS 98 (103)
T ss_dssp EECTTCS
T ss_pred EEECCCC
Confidence 9998753
No 238
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.09 E-value=3e-10 Score=89.14 Aligned_cols=67 Identities=25% Similarity=0.462 Sum_probs=57.6
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~ 75 (433)
...|||.+. .|++|..|.++|+|+++| |++||+|++|||+++.++++.++..+++. +..+.|+|.|.
T Consensus 12 ~~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 12 NEEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp TCCCCEEEE------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred CCCCCEEEe------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 357888776 379999999999999999 99999999999999998888888888874 46888998875
No 239
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=5.4e-10 Score=90.44 Aligned_cols=78 Identities=26% Similarity=0.247 Sum_probs=64.2
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLV 187 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V 187 (433)
.+.+.+. ...|||.+.+ ..|++|..|.++++|+++||++||+|++|||+++. ..++.+++..++.. ..+.|+|
T Consensus 6 ~v~l~~~-~~g~G~~l~~----~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~-~~~~~~~~~~l~~~~~~v~l~v 79 (91)
T 2f5y_A 6 QITIPRG-KDGFGFTICC----DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVE-HWKCVELAHEIRSCPSEIILLV 79 (91)
T ss_dssp EEEEECB-TTBTSEEEEC----SSSCEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TCCHHHHHHHHHTCSSEEEEEE
T ss_pred EEEEEeC-CCCccEEEec----CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEE
Confidence 3445443 3568998864 35799999999999999999999999999999999 67888888888764 7899999
Q ss_pred EECCe
Q psy12296 188 HRGVG 192 (433)
Q Consensus 188 ~R~~~ 192 (433)
.|++.
T Consensus 80 ~R~~~ 84 (91)
T 2f5y_A 80 WRMVP 84 (91)
T ss_dssp EECC-
T ss_pred EeCCC
Confidence 99864
No 240
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=3.6e-11 Score=98.71 Aligned_cols=68 Identities=25% Similarity=0.417 Sum_probs=61.1
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
++|||.|.+ ..+++|..|.++|||+ +||++||+|++|||+++.++++.+++.+++ .++.|.|+|.|+.
T Consensus 21 ~~~G~~l~~----~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 21 QDYGFHISE----SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVRCT 89 (96)
T ss_dssp CSCSBCCCS----SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEEEEECC
T ss_pred CcccEEEec----CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 479999986 4689999999999996 899999999999999999999888888887 5889999999976
No 241
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=5.7e-10 Score=92.11 Aligned_cols=83 Identities=27% Similarity=0.443 Sum_probs=64.4
Q ss_pred ceEEeeCCCCCCCceeecCCC---------CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhc
Q psy12296 109 PITLEVPPHGKLGCGICKGPQ---------WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMK 178 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~---------~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr 178 (433)
.+.+.+.....||+.+.++.. ...|++|..|.++|||+++| |++||+|++|||+++. ..++.++.+.++
T Consensus 7 ~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~-~~~~~~~~~~l~ 85 (103)
T 2fcf_A 7 RVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLR-DASHEQAVEAIR 85 (103)
T ss_dssp EEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHHH
T ss_pred EEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHH
Confidence 344555556678888776432 12589999999999999999 9999999999999999 667888888887
Q ss_pred CC-CeEEEEEEECCe
Q psy12296 179 SS-CLLELLVHRGVG 192 (433)
Q Consensus 179 ~~-~~v~L~V~R~~~ 192 (433)
.. ..+.|+|.|...
T Consensus 86 ~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 86 KAGNPVVFMVQSIIS 100 (103)
T ss_dssp TCCSSEEEEEECCCC
T ss_pred hCCCcEEEEEEECCC
Confidence 65 689999988753
No 242
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.08 E-value=5.3e-10 Score=93.55 Aligned_cols=82 Identities=18% Similarity=0.227 Sum_probs=66.4
Q ss_pred ceEEeeCCCCCCCceeecCCCC------------CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHH
Q psy12296 109 PITLEVPPHGKLGCGICKGPQW------------KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSV 176 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~------------~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~ 176 (433)
.+.+.+.....|||.+.++... ..|++|..|.++++|+++||++||+|++|||+++. ..++.+++..
T Consensus 10 ~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~-~~~~~~~~~~ 88 (109)
T 1q3o_A 10 TVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVV-KVGHRQVVNM 88 (109)
T ss_dssp EEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECT-TCCHHHHHHH
T ss_pred EEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHH
Confidence 3455555667899998875431 23899999999999999999999999999999999 6678888888
Q ss_pred hcC-CCeEEEEEEECC
Q psy12296 177 MKS-SCLLELLVHRGV 191 (433)
Q Consensus 177 Lr~-~~~v~L~V~R~~ 191 (433)
++. +..+.|+|.|..
T Consensus 89 l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 89 IRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHTTTEEEEEEEEEE
T ss_pred HHhCCCEEEEEEEECC
Confidence 875 478999888763
No 243
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.08 E-value=4.3e-10 Score=91.34 Aligned_cols=80 Identities=23% Similarity=0.298 Sum_probs=66.6
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
.+.+.+.. ..|||.+.++ ....+++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|+
T Consensus 7 ~v~l~k~~-~~lG~~i~~~-~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~v~l~ 83 (93)
T 3o46_A 7 IIRLVKNR-EPLGATIKKD-EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVE-DKRPEEIIQILAQSQGAITFK 83 (93)
T ss_dssp EEEEEESS-SCCCEEEEEC-TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEEST-TSCHHHHHHHHHHCCEEEEEE
T ss_pred EEEEEeCC-CCccEEEEec-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEEE
Confidence 45556654 5899999865 334689999999999999999 9999999999999998 78999999998765 678888
Q ss_pred EEECC
Q psy12296 187 VHRGV 191 (433)
Q Consensus 187 V~R~~ 191 (433)
|.|..
T Consensus 84 v~~~~ 88 (93)
T 3o46_A 84 IIPGS 88 (93)
T ss_dssp EECC-
T ss_pred EEeCC
Confidence 88764
No 244
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.08 E-value=4.8e-10 Score=94.29 Aligned_cols=82 Identities=26% Similarity=0.288 Sum_probs=68.4
Q ss_pred cceEEeeCCCCCCCceeecCCCC--CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC----
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQW--KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS---- 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~--~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~---- 180 (433)
..+.+.+. ..|||.+.++.+. ..+++|..|.++++|+++| |++||+|++|||+++. .++|++++++|+..
T Consensus 17 ~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~-~~~~~~~~~~l~~~~~r~ 93 (109)
T 1wi4_A 17 RVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMI-GVSFEEAKSIITRAKLRS 93 (109)
T ss_dssp EEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCT-TCCHHHHHHHHHHSCCSS
T ss_pred EEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHccccCC
Confidence 34555553 7899999987542 3479999999999999999 9999999999999999 88899999998653
Q ss_pred -CeEEEEEEECCe
Q psy12296 181 -CLLELLVHRGVG 192 (433)
Q Consensus 181 -~~v~L~V~R~~~ 192 (433)
..+.|.|.|++.
T Consensus 94 ~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 94 ESPWEIAFIRSGP 106 (109)
T ss_dssp SSCEEEEEECCCC
T ss_pred CceEEEEEEeCCC
Confidence 578999998753
No 245
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.08 E-value=8.2e-10 Score=92.50 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=66.1
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
.+.|.+.....||+.+.+ ...|++|..|.++|||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|+
T Consensus 5 ~v~L~k~~~~glG~~i~~---~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~-~~~~~~~~~~~~~~~~~v~l~ 80 (106)
T 2la8_A 5 NVDLMKKAGKELGLSLSP---NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALE-GLPFQVCYALFKGANGKVSME 80 (106)
T ss_dssp EEEECCBSSSTTCCEEEE---CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCS-SSCHHHHHHHHHSCBSCEEEE
T ss_pred EEEEEeCCCCccCEEEEe---CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHhCCCCeEEEE
Confidence 344555566778998865 24689999999999999999 9999999999999998 77788888888765 789999
Q ss_pred EEECC
Q psy12296 187 VHRGV 191 (433)
Q Consensus 187 V~R~~ 191 (433)
|.|..
T Consensus 81 v~R~~ 85 (106)
T 2la8_A 81 VTRPK 85 (106)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99974
No 246
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.08 E-value=2.2e-10 Score=96.55 Aligned_cols=87 Identities=34% Similarity=0.546 Sum_probs=72.9
Q ss_pred ccceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEE
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELL 186 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~ 186 (433)
+..+.+.+.....|||.+.++.+...|++|..|.++++|+++||++||+|++|||+++. ..++.+++..++....+.|+
T Consensus 16 ~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~-~~~~~~~~~~~~~~~~v~l~ 94 (114)
T 1x5n_A 16 EKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFS-NLDHKEAVNVLKSSRSLTIS 94 (114)
T ss_dssp SEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETT-SCCTTHHHHHHHHCSSEEEE
T ss_pred cEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHhcCCeEEEE
Confidence 45566666677889999987765567999999999999999999999999999999999 55577788887767789999
Q ss_pred EEEC-Ceee
Q psy12296 187 VHRG-VGLD 194 (433)
Q Consensus 187 V~R~-~~~~ 194 (433)
|.|+ +...
T Consensus 95 v~r~~g~~~ 103 (114)
T 1x5n_A 95 IVAAAGREL 103 (114)
T ss_dssp ECSSTTTHH
T ss_pred EEcCCCCce
Confidence 9998 6543
No 247
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.08 E-value=4.3e-10 Score=90.76 Aligned_cols=67 Identities=24% Similarity=0.439 Sum_probs=57.7
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
..|||.+. .|++|..|.++|+|+++| |++||+|++|||+++.++++.++..+++. +..+.|+|.|.+
T Consensus 15 ~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g 83 (92)
T 3cyy_A 15 EEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDE 83 (92)
T ss_dssp SCCCEEEE------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC--
T ss_pred CCCCEEEe------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCC
Confidence 46788776 489999999999999999 99999999999999998888888888875 568999998876
No 248
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.07 E-value=4.8e-10 Score=96.97 Aligned_cols=82 Identities=18% Similarity=0.184 Sum_probs=68.3
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC---CeEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS---CLLE 184 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~---~~v~ 184 (433)
.+.+.+. ...|||.+.++.....+++|..|.++++|+++| |++||+|++|||+++. ..++.+++++|+.. ..+.
T Consensus 21 ~v~l~~~-~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~-~~~~~~~~~~l~~~~~g~~v~ 98 (129)
T 2kpk_A 21 HTKLRKS-SRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVL-GHTHAQVVKIFQSIPIGASVD 98 (129)
T ss_dssp EEEEEEC-SSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECT-TSCHHHHHHHHHHSCTTEEEE
T ss_pred EEEEEEC-CCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCCeEE
Confidence 4455553 457999998765445679999999999999999 9999999999999999 77888888888663 6799
Q ss_pred EEEEECCe
Q psy12296 185 LLVHRGVG 192 (433)
Q Consensus 185 L~V~R~~~ 192 (433)
|+|.|+..
T Consensus 99 l~v~R~~~ 106 (129)
T 2kpk_A 99 LELCRGYP 106 (129)
T ss_dssp EEEEECSC
T ss_pred EEEEeCCC
Confidence 99999864
No 249
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=3.2e-10 Score=93.14 Aligned_cols=69 Identities=26% Similarity=0.394 Sum_probs=60.0
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~g 76 (433)
..+|||+|... ..|++|..|.++ |+++||++||+|++|||+++.++++.+++.+++. +..|.|+|.|.+
T Consensus 20 ~~g~G~~i~~~---~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 91 (96)
T 1ujv_A 20 AQGFGFTIADS---PTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGS 91 (96)
T ss_dssp SSSSSEEEEEE---TTEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCS
T ss_pred CCceeEEEEcC---CCCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECC
Confidence 36899999753 248999999983 7889999999999999999999999999988874 789999999876
No 250
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.07 E-value=1.9e-10 Score=91.31 Aligned_cols=77 Identities=21% Similarity=0.358 Sum_probs=63.7
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLV 187 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V 187 (433)
.+.|.+.. .+|||.+.+ ..|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.. ..+.|+|
T Consensus 5 ~v~l~~~~-~g~G~~~~~----~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~v~l~v 78 (83)
T 2kv8_A 5 SVEVARGR-AGYGFTLSG----QAPCVLSCVMRGSPADFVGLRAGDQILAVNEINVK-KASHEDVVKLIGKCSGVLHMVI 78 (83)
T ss_dssp EEEECCCS-SCCSCBCCC----SSSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECS-SCCHHHHHHHHTTCSSCEEEEE
T ss_pred EEEEEeCC-CcccEEEEc----CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEEEE
Confidence 34555544 668888754 34799999999999999999999999999999999 66789999988765 6799999
Q ss_pred EECC
Q psy12296 188 HRGV 191 (433)
Q Consensus 188 ~R~~ 191 (433)
.|+.
T Consensus 79 ~R~~ 82 (83)
T 2kv8_A 79 AEGV 82 (83)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8873
No 251
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.07 E-value=6e-10 Score=94.48 Aligned_cols=84 Identities=19% Similarity=0.251 Sum_probs=68.7
Q ss_pred ccceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEE
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLE 184 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~ 184 (433)
...+.+.+.....|||.+.++.....+++|..|.++|||+++| |++||+|++|||+++. ..++.++++.++.. ..+.
T Consensus 25 ~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~-~~~~~~~~~~l~~~~~~v~ 103 (114)
T 2gzv_A 25 PGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIK-GKTKVEVAKMIQEVKGEVT 103 (114)
T ss_dssp CEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHHHHCCSEEE
T ss_pred CEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEE
Confidence 3456777777778999998876555689999999999999999 9999999999999996 66888888888744 6788
Q ss_pred EEEEECC
Q psy12296 185 LLVHRGV 191 (433)
Q Consensus 185 L~V~R~~ 191 (433)
|+|.+..
T Consensus 104 l~v~~~~ 110 (114)
T 2gzv_A 104 IHYNKLQ 110 (114)
T ss_dssp EEEECCC
T ss_pred EEEEecc
Confidence 8886653
No 252
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.07 E-value=3.1e-10 Score=93.89 Aligned_cols=79 Identities=22% Similarity=0.284 Sum_probs=65.8
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
.+.+.+.....||+.+.... ..|++|..|.+++||+++| |++||+|++|||+++. ..+++++.+.++.. ..+.|+
T Consensus 15 ~v~l~K~~~~~lG~~l~~~~--~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~-~~~~~~~~~~l~~~~~~v~L~ 91 (97)
T 2ejy_A 15 LIQFEKVTEEPMGICLKLNE--KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVT-NHSVDQLQKAMKETKGMISLK 91 (97)
T ss_dssp EEEEEECSSSCCSEEEEECT--TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCC-SSCSHHHHHHHHHCCEEEEEE
T ss_pred EEEEEeCCCCCeeEEEEeCC--CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEE
Confidence 46677777788999987532 3689999999999999999 9999999999999998 66788888887754 678888
Q ss_pred EEEC
Q psy12296 187 VHRG 190 (433)
Q Consensus 187 V~R~ 190 (433)
|.+.
T Consensus 92 V~~~ 95 (97)
T 2ejy_A 92 VIPN 95 (97)
T ss_dssp EECC
T ss_pred EEEC
Confidence 8764
No 253
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=1e-10 Score=101.48 Aligned_cols=70 Identities=23% Similarity=0.287 Sum_probs=62.3
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC---CcEEEEEEEEc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS---QNIISLKVRSV 75 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~---g~~V~L~V~R~ 75 (433)
..+|||+|.+. ..+++|..|.++|||+++| |++||+|++|||++|.+.++.+++.+++. |..|+|+|.|+
T Consensus 37 ~~glG~~i~~~---~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 37 NLGLGLVVIQN---GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TTCCCCCEEEE---TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CceEeEEEEcC---CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 46899999862 3579999999999999999 99999999999999998888999999975 78899999986
No 254
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.06 E-value=4.7e-10 Score=102.13 Aligned_cols=73 Identities=30% Similarity=0.586 Sum_probs=65.2
Q ss_pred CeEeEEEEecCCC-----CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREH-----TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~-----~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
.+|||++.++.+. ..|++|..|.++|+|+++| |++||+|++|||++|.++++.+++.+++. ++.+.|+|.|.+
T Consensus 111 ~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 190 (196)
T 3gsl_A 111 KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPS 190 (196)
T ss_dssp TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEEEEEEEEEES
T ss_pred CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCeEEEEEeCCC
Confidence 4799999986553 2589999999999999999 99999999999999999888999998876 678999999876
No 255
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.06 E-value=3e-10 Score=93.80 Aligned_cols=83 Identities=20% Similarity=0.288 Sum_probs=67.9
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELL 186 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~ 186 (433)
..+.|.+. ...|||.+.++.. ..|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++. +..+.|+
T Consensus 8 r~v~l~k~-~~g~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g~~v~l~ 84 (102)
T 2d90_A 8 RVVVIKKG-SNGYGFYLRAGPE-QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVE-ALDHDGVVEMIRKGGDQTTLL 84 (102)
T ss_dssp EEEEEECC-SSSSSCEEEECSS-SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCT-TSCHHHHHHHHHHSTTEEEEE
T ss_pred EEEEEeeC-CCCccEEEEeecC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCEEEEE
Confidence 34555554 3579999986443 46899999999999999999999999999999999 6668888888765 5899999
Q ss_pred EEECCee
Q psy12296 187 VHRGVGL 193 (433)
Q Consensus 187 V~R~~~~ 193 (433)
|.|.+..
T Consensus 85 v~r~~~~ 91 (102)
T 2d90_A 85 VLDKEAE 91 (102)
T ss_dssp ECSTTCC
T ss_pred EEECCCc
Confidence 9887654
No 256
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=8e-10 Score=94.54 Aligned_cols=89 Identities=21% Similarity=0.390 Sum_probs=70.2
Q ss_pred cceEEeeCCCCCCCceeecCC----CCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC---
Q psy12296 108 VPITLEVPPHGKLGCGICKGP----QWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS--- 179 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~----~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~--- 179 (433)
..+.|.+.....|||.+.++. ....+++|..|.+++||+++| |++||+|++|||+++. ..++++++++++.
T Consensus 17 ~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~ 95 (122)
T 1v5q_A 17 TEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTE-DSTFEEANQLLRDSSI 95 (122)
T ss_dssp EEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESS-SSCHHHHHHHHHHHTT
T ss_pred EEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCC
Confidence 345555666688999998752 224578999999999999999 9999999999999998 5567777776654
Q ss_pred CCeEEEEEEECCeeeeec
Q psy12296 180 SCLLELLVHRGVGLDLFP 197 (433)
Q Consensus 180 ~~~v~L~V~R~~~~~~~~ 197 (433)
.+.+.|+|.|++...+++
T Consensus 96 g~~v~l~v~R~~~~~~~~ 113 (122)
T 1v5q_A 96 TSKVTLEIEFDVAESVIP 113 (122)
T ss_dssp TTCEEEEEEEECCCSCCC
T ss_pred CCeEEEEEEECCccccCC
Confidence 468999999998655554
No 257
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.06 E-value=6.4e-10 Score=91.95 Aligned_cols=72 Identities=32% Similarity=0.414 Sum_probs=61.0
Q ss_pred CCCCceeecCCC------------CCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC--CeE
Q psy12296 118 GKLGCGICKGPQ------------WKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLL 183 (433)
Q Consensus 118 ~~LG~~l~gg~~------------~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v 183 (433)
..|||++.++.+ ...|++|..|.++|||+++||++||+|++|||+++. ..+|++++..++.. ..+
T Consensus 19 ~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~g~~v 97 (104)
T 3sfj_A 19 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMT-MVTHDQARKRLTKRSEEVV 97 (104)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TCCHHHHHHHHTCTTCSEE
T ss_pred CcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCEE
Confidence 358888875432 356899999999999999999999999999999998 66799999998754 689
Q ss_pred EEEEEEC
Q psy12296 184 ELLVHRG 190 (433)
Q Consensus 184 ~L~V~R~ 190 (433)
.|+|.|.
T Consensus 98 ~l~v~R~ 104 (104)
T 3sfj_A 98 RLLVTRQ 104 (104)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999874
No 258
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=5.5e-10 Score=94.30 Aligned_cols=81 Identities=16% Similarity=0.288 Sum_probs=69.4
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCC-CCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGL-KCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL-~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
..+.+.+.....|||.+... ..|++|..|.++++|+++|| ++||+|++|||+++. ..++.+++++++.. ..+.|
T Consensus 27 ~~v~l~k~~~~~lG~~i~~~---~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~-~~~~~~~~~~l~~~~~~v~l 102 (113)
T 1va8_A 27 KIVRIEKARDIPLGATVRNE---MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIR-GKDVNEVFDLLSDMHGTLTF 102 (113)
T ss_dssp EEEEEEECTTCCCCEEEEEC---SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECT-TCCHHHHHHHHHHCCEEEEE
T ss_pred EEEEEEeCCCCceeEEEEeC---CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEE
Confidence 44677777766899998653 46899999999999999998 999999999999999 77899999988654 68999
Q ss_pred EEEECCe
Q psy12296 186 LVHRGVG 192 (433)
Q Consensus 186 ~V~R~~~ 192 (433)
+|.|+++
T Consensus 103 ~v~r~~~ 109 (113)
T 1va8_A 103 VLIPSSG 109 (113)
T ss_dssp EEECCCC
T ss_pred EEEECCc
Confidence 9998864
No 259
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.05 E-value=3.4e-10 Score=93.69 Aligned_cols=73 Identities=33% Similarity=0.469 Sum_probs=62.9
Q ss_pred CCCCCceeecCCC--------CCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEEE
Q psy12296 117 HGKLGCGICKGPQ--------WKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELLV 187 (433)
Q Consensus 117 ~~~LG~~l~gg~~--------~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~V 187 (433)
...|||.+.++.. ...|++|..|.+++||++ ||++||+|++|||+++. ..++.+++..++. +..+.|+|
T Consensus 20 ~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~-~~~~~~~~~~~~~~g~~v~l~v 97 (103)
T 1n7t_A 20 DPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFI-NIEHGQAVSLLKTFQNTVELII 97 (103)
T ss_dssp SSCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECS-SCCHHHHHHHHHHCCSEEEEEE
T ss_pred CCCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECC-CCCHHHHHHHhhcCCCeEEEEE
Confidence 3489999988653 456999999999999999 99999999999999998 7778888888765 48899999
Q ss_pred EECC
Q psy12296 188 HRGV 191 (433)
Q Consensus 188 ~R~~ 191 (433)
.|+.
T Consensus 98 ~R~~ 101 (103)
T 1n7t_A 98 VREV 101 (103)
T ss_dssp ECCC
T ss_pred EecC
Confidence 9873
No 260
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.05 E-value=9.1e-10 Score=90.93 Aligned_cols=81 Identities=28% Similarity=0.432 Sum_probs=67.3
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
..+.+.+. ..+|||.+.++.. ..|++|..|.++|||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|
T Consensus 13 ~~v~l~k~-~~glG~~~~~~~~-~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l 89 (104)
T 3i4w_A 13 RRIVIHRG-STGLGFNIVGGEX-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLR-NASHEQAAIALKNAGQTVTI 89 (104)
T ss_dssp EEEEEECB-TTBTSEEEEECC--CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECT-TCCHHHHHHHHHTSCSEEEE
T ss_pred EEEEEEeC-CCccCEEEECCCC-CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEE
Confidence 34555554 4579999987644 4599999999999999999 9999999999999998 77888888887765 78999
Q ss_pred EEEECC
Q psy12296 186 LVHRGV 191 (433)
Q Consensus 186 ~V~R~~ 191 (433)
+|.|++
T Consensus 90 ~v~r~~ 95 (104)
T 3i4w_A 90 IAQYKP 95 (104)
T ss_dssp EEEECH
T ss_pred EEEECc
Confidence 999874
No 261
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.05 E-value=9.3e-11 Score=101.33 Aligned_cols=81 Identities=22% Similarity=0.359 Sum_probs=68.1
Q ss_pred EEeeCCCCCCCceeecCCCC----CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC------
Q psy12296 111 TLEVPPHGKLGCGICKGPQW----KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS------ 179 (433)
Q Consensus 111 ~L~~~~~~~LG~~l~gg~~~----~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~------ 179 (433)
.+.+.....|||.+.++... ..|++|..|.+++||+++| |++||+|++|||+++. ..+|.+++++|+.
T Consensus 30 ~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~~~g 108 (127)
T 1wg6_A 30 PLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLL-GKSNHEAMETLRRSMSMEG 108 (127)
T ss_dssp ECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEEST-TSCHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHHhhcccc
Confidence 33335678899999875421 2489999999999999999 9999999999999999 8899999999874
Q ss_pred --CCeEEEEEEECCe
Q psy12296 180 --SCLLELLVHRGVG 192 (433)
Q Consensus 180 --~~~v~L~V~R~~~ 192 (433)
...|.|+|.|+..
T Consensus 109 ~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 109 NIRGMIQLVILRRSG 123 (127)
T ss_dssp HHTCEEEEEEEECSC
T ss_pred CCCCEEEEEEEeCCC
Confidence 4799999999853
No 262
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.05 E-value=3.7e-10 Score=115.47 Aligned_cols=73 Identities=25% Similarity=0.480 Sum_probs=66.5
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcCc
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVGM 77 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g~ 77 (433)
+++|||+|.+|.+ .|++|..|.+||||+++||++||+|++|||+++.++++.+++.+++ .|..|+|+|.|++.
T Consensus 18 ~~~lG~~i~gg~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~ 93 (391)
T 3tsz_A 18 GDSVGLRLAGGND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 93 (391)
T ss_dssp CSSCCEEEEEETT--TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCceeEEEEecCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCc
Confidence 5689999998765 7999999999999999999999999999999999999999998887 47899999999763
No 263
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.05 E-value=5.1e-10 Score=95.97 Aligned_cols=83 Identities=22% Similarity=0.308 Sum_probs=68.9
Q ss_pred ceEEeeCCCCCCCceeecCCCC-CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQW-KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~-~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
.+.+.+. ...|||.+.++.+. ..|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|
T Consensus 28 ~v~l~k~-~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~-~~~~~~~~~~~~~~~~~v~l 105 (124)
T 2daz_A 28 IIELEKD-KNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILY-GRSHQNASAIIKTAPSKVKL 105 (124)
T ss_dssp EEEEECC-SSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCT-TSCHHHHHHHHHHSCSEEEE
T ss_pred EEEEEeC-CCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEE
Confidence 4455554 46799999876543 3689999999999999999 9999999999999998 77889998888654 78999
Q ss_pred EEEECCee
Q psy12296 186 LVHRGVGL 193 (433)
Q Consensus 186 ~V~R~~~~ 193 (433)
+|.|++..
T Consensus 106 ~v~R~~~~ 113 (124)
T 2daz_A 106 VFIRNEDA 113 (124)
T ss_dssp EEEECTTH
T ss_pred EEEeCCCc
Confidence 99998653
No 264
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.05 E-value=7.6e-10 Score=92.10 Aligned_cols=82 Identities=22% Similarity=0.237 Sum_probs=66.0
Q ss_pred ceEEeeCCCCCCCceeecCCCC------------CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHH
Q psy12296 109 PITLEVPPHGKLGCGICKGPQW------------KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSV 176 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~------------~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~ 176 (433)
.+.|.+.. ..|||.+.++... ..+++|..|.+++||+++||++||+|++|||+++. ..++.+++..
T Consensus 9 ~v~l~k~~-~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~ 86 (107)
T 3qe1_A 9 VVRIVKSE-SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVE-GATHKQVVDL 86 (107)
T ss_dssp EEEEECBT-TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TCCHHHHHHH
T ss_pred EEEEEECC-CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHH
Confidence 45555544 3799998776321 23457999999999999999999999999999999 7888888888
Q ss_pred hcCC-CeEEEEEEECCe
Q psy12296 177 MKSS-CLLELLVHRGVG 192 (433)
Q Consensus 177 Lr~~-~~v~L~V~R~~~ 192 (433)
++.. ..+.|+|.|.+.
T Consensus 87 l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 87 IRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHCSSEEEEEEECSSC
T ss_pred HHcCCCEEEEEEEcCCC
Confidence 8764 889999998753
No 265
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.05 E-value=3.9e-10 Score=97.18 Aligned_cols=85 Identities=21% Similarity=0.273 Sum_probs=70.5
Q ss_pred cceEEeeCCCCCCCceeecCCC-----CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC-C
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ-----WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS-S 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~-----~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~ 180 (433)
..+.+.+.....|||.+.++.. ...|++|..|.+++||+++| |++||+|++|||+++. .+++.+++++++. +
T Consensus 17 ~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~l~~~~ 95 (129)
T 2dmz_A 17 YNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQ-GFANHDVVEVLRNAG 95 (129)
T ss_dssp EEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCT-TCCHHHHHHHHHHCC
T ss_pred EEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCC
Confidence 4455555567889999987532 34689999999999999999 9999999999999999 7778888888875 4
Q ss_pred CeEEEEEEECCee
Q psy12296 181 CLLELLVHRGVGL 193 (433)
Q Consensus 181 ~~v~L~V~R~~~~ 193 (433)
..+.|+|.|++..
T Consensus 96 ~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 96 QVVHLTLVRRKTS 108 (129)
T ss_dssp SSEEEEEEEESSS
T ss_pred CeEEEEEEeCCcc
Confidence 7899999998753
No 266
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.05 E-value=6.2e-10 Score=101.22 Aligned_cols=81 Identities=27% Similarity=0.460 Sum_probs=68.5
Q ss_pred cceEEeeCCCCCCCceeec---CCC---CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC
Q psy12296 108 VPITLEVPPHGKLGCGICK---GPQ---WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~g---g~~---~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~ 180 (433)
..+.|.+.. .+|||.|.+ +.. ...|++|..|.++++|+++| |++||+|++|||+++. ..++.+++.+|+..
T Consensus 82 ~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~-~~~~~~~~~~l~~~ 159 (170)
T 3egg_C 82 FPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLV-GVTQSFAASVLRNT 159 (170)
T ss_dssp EEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TBCHHHHHHHHHHC
T ss_pred EEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcC
Confidence 345566554 679999987 322 23689999999999999999 9999999999999999 88999999999865
Q ss_pred -CeEEEEEEEC
Q psy12296 181 -CLLELLVHRG 190 (433)
Q Consensus 181 -~~v~L~V~R~ 190 (433)
..|.|+|.|+
T Consensus 160 g~~v~L~V~R~ 170 (170)
T 3egg_C 160 KGRVRFMIGRE 170 (170)
T ss_dssp CSEEEEEEEEC
T ss_pred CCEEEEEEEeC
Confidence 7999999985
No 267
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=4.3e-10 Score=93.87 Aligned_cols=83 Identities=27% Similarity=0.487 Sum_probs=68.0
Q ss_pred cceEEeeCCCCCCCceee-----cCCC---CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhc
Q psy12296 108 VPITLEVPPHGKLGCGIC-----KGPQ---WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMK 178 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~-----gg~~---~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr 178 (433)
..+.|.+. ...|||.+. ++.. ...|++|..|.++|||+++| |++||+|++|||+++. ..++.+++..++
T Consensus 11 ~~v~l~k~-~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~~~ 88 (108)
T 1q7x_A 11 FEVELAKN-DNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLE-GATHKQAVETLR 88 (108)
T ss_dssp EEEEEESS-SCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECB-SCTTSHHHHHHH
T ss_pred EEEEEEEC-CCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHH
Confidence 34555554 467999998 5543 24689999999999999999 9999999999999998 668888888876
Q ss_pred CC-CeEEEEEEECCe
Q psy12296 179 SS-CLLELLVHRGVG 192 (433)
Q Consensus 179 ~~-~~v~L~V~R~~~ 192 (433)
.. ..+.|+|.|++.
T Consensus 89 ~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 89 NTGQVVHLLLEKGQS 103 (108)
T ss_dssp HTTSEEEEEEECCCC
T ss_pred cCCCeEEEEEEeCCc
Confidence 55 899999999864
No 268
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.03 E-value=1e-09 Score=89.11 Aligned_cols=81 Identities=21% Similarity=0.291 Sum_probs=64.5
Q ss_pred eEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEE
Q psy12296 110 ITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVH 188 (433)
Q Consensus 110 v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~ 188 (433)
+.|.+ ....|||.+.++.. ..|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.. ..+.+++.
T Consensus 9 v~l~~-~~~~~G~~l~~~~~-~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~~~~~~~ 85 (95)
T 3r68_A 9 VVIKK-GSNGYGFYLRAGPE-QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVE-ALDHDGVVEMIRKGGDQTTLLVL 85 (95)
T ss_dssp EEEEC-BTTBCSCEEEEC---CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECT-TCCHHHHHHHHHTTTTEEEEEEE
T ss_pred EEEec-CCCcccEEEEecCC-CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEEEEE
Confidence 44444 34679999976543 25899999999999999999999999999999999 77889999988875 67888777
Q ss_pred ECCee
Q psy12296 189 RGVGL 193 (433)
Q Consensus 189 R~~~~ 193 (433)
|.+..
T Consensus 86 r~~~~ 90 (95)
T 3r68_A 86 DKELE 90 (95)
T ss_dssp ECC--
T ss_pred CCccc
Confidence 76543
No 269
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=4.2e-10 Score=93.76 Aligned_cols=81 Identities=20% Similarity=0.281 Sum_probs=67.3
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCc-eEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC------C
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPG-IFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS------S 180 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~G-V~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~------~ 180 (433)
.+.+. .....|||.|.++.+...+ ++|..|.+++||+++| |++||+|++|||+++. .++|++++++|+. .
T Consensus 9 ~v~l~-k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~~~~~ 86 (103)
T 1ufx_A 9 LVRVK-KSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLR-GKEHREAARIIAEAFKTKDR 86 (103)
T ss_dssp EEEEE-CCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECT-TCBHHHHHHHHHHHHHCSSC
T ss_pred EEEEE-cCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHHhcccCCC
Confidence 34443 3557899999987654434 4999999999999999 9999999999999999 8899999999876 2
Q ss_pred CeEEEEEEECC
Q psy12296 181 CLLELLVHRGV 191 (433)
Q Consensus 181 ~~v~L~V~R~~ 191 (433)
+.+.|+|.|.+
T Consensus 87 ~~i~l~v~r~~ 97 (103)
T 1ufx_A 87 DYIDFLVTEFN 97 (103)
T ss_dssp SEEEEEECCCC
T ss_pred CeEEEEEEEcc
Confidence 68899998875
No 270
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=5.3e-10 Score=93.23 Aligned_cols=81 Identities=28% Similarity=0.487 Sum_probs=66.7
Q ss_pred ceEEeeCCCCCCCceeec---CCC---CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-
Q psy12296 109 PITLEVPPHGKLGCGICK---GPQ---WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS- 180 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~g---g~~---~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~- 180 (433)
.+.|.+. ...|||.+.+ +.+ ...|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++..
T Consensus 12 ~v~l~k~-~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~ 89 (107)
T 1wf8_A 12 PVELEKD-EDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLV-GVTQNFAATVLRNTK 89 (107)
T ss_dssp EEEEECB-TTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECB-SCCHHHHHHHHHHCC
T ss_pred EEEEEEC-CCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHhcCC
Confidence 3444443 4679999987 332 24689999999999999999 9999999999999998 77888888887654
Q ss_pred CeEEEEEEECC
Q psy12296 181 CLLELLVHRGV 191 (433)
Q Consensus 181 ~~v~L~V~R~~ 191 (433)
..+.|+|.|++
T Consensus 90 ~~v~l~v~R~~ 100 (107)
T 1wf8_A 90 GNVRFVIGREK 100 (107)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 89999999975
No 271
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.03 E-value=5.7e-10 Score=89.85 Aligned_cols=70 Identities=29% Similarity=0.226 Sum_probs=55.4
Q ss_pred CCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhc---CCCeEEEEEEECC
Q psy12296 118 GKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMK---SSCLLELLVHRGV 191 (433)
Q Consensus 118 ~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr---~~~~v~L~V~R~~ 191 (433)
..||+.+.. ...|++|..|.+++||+++||++||+|++|||+++. ..++.++...++ .+..+.|+|.|++
T Consensus 17 ~~lG~~~~~---~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 17 LDFGFTIKW---DIPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFS-YNDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp SCCSEEEEE---ETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECC-TTCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CcccEEEEe---cCCCEEEEEECCCChHHHcCCCCCCEEEEECCEEcc-CCCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 368887753 245899999999999999999999999999999994 334555555444 3588999999975
No 272
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.02 E-value=1.3e-09 Score=91.16 Aligned_cols=75 Identities=29% Similarity=0.390 Sum_probs=63.7
Q ss_pred CCCCCceeecCCCC---CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC---CCeEEEEEEE
Q psy12296 117 HGKLGCGICKGPQW---KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS---SCLLELLVHR 189 (433)
Q Consensus 117 ~~~LG~~l~gg~~~---~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~~v~L~V~R 189 (433)
...|||.+.++... ..|++|..|.+++||+++| |++||+|++|||+++. ..++.++++.++. +..+.|+|.|
T Consensus 21 ~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~g~~v~l~v~R 99 (111)
T 2koj_A 21 TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLA-GKSQEEVVSLLRSTKMEGTVSLLVFR 99 (111)
T ss_dssp TTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECT-TSCHHHHHHHHHHCCCSSEEEEEEEE
T ss_pred CCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCCeEEEEEEe
Confidence 46799998765421 2689999999999999999 9999999999999998 6778888888875 4789999999
Q ss_pred CCe
Q psy12296 190 GVG 192 (433)
Q Consensus 190 ~~~ 192 (433)
++.
T Consensus 100 ~~~ 102 (111)
T 2koj_A 100 QEE 102 (111)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
No 273
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.02 E-value=6.7e-10 Score=93.77 Aligned_cols=82 Identities=27% Similarity=0.387 Sum_probs=68.4
Q ss_pred ceEEeeCCCCCCCceeecCCCCC-CceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWK-PGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~-~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
.+.+.. ....|||.+.++.+.. .|++|..|.++++|+++| |++||+|++|||+++. ..++.+++..++.. ..+.|
T Consensus 20 ~v~l~~-~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~l~~~~~~v~l 97 (116)
T 2dm8_A 20 IIEISK-GRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLR-NSSHEEAITALRQTPQKVRL 97 (116)
T ss_dssp EEEEEC-CSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECS-SSCHHHHHHHHHTCCSEEEE
T ss_pred EEEEEE-CCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEE
Confidence 444544 3567999998765433 589999999999999999 9999999999999999 66789999888765 78999
Q ss_pred EEEECCe
Q psy12296 186 LVHRGVG 192 (433)
Q Consensus 186 ~V~R~~~ 192 (433)
+|.|++.
T Consensus 98 ~v~R~~~ 104 (116)
T 2dm8_A 98 VVYRDEA 104 (116)
T ss_dssp EEECCSS
T ss_pred EEEeCCc
Confidence 9999864
No 274
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.02 E-value=5.4e-10 Score=92.82 Aligned_cols=85 Identities=20% Similarity=0.210 Sum_probs=69.5
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELL 186 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~ 186 (433)
..+.|.+ ....|||.+.+.. ...|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++. ...+.|+
T Consensus 10 r~v~l~k-~~~~~G~~l~~~~-~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l~ 86 (106)
T 2eei_A 10 RLCYLVK-EGGSYGFSLKTVQ-GKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVE-DASHEEVVEKVKKSGSRVMFL 86 (106)
T ss_dssp EEEEEEC-CSSSCSCCEECCS-SCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECT-TCCHHHHHHHHHHHCSEEEEE
T ss_pred EEEEEEE-CCCCCCEEEEecc-CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEEE
Confidence 4455665 4678999997643 256899999999999999999999999999999998 7788888888765 4789999
Q ss_pred EEECCeeee
Q psy12296 187 VHRGVGLDL 195 (433)
Q Consensus 187 V~R~~~~~~ 195 (433)
|.|.+...+
T Consensus 87 v~r~~~~~~ 95 (106)
T 2eei_A 87 LVDKETDKR 95 (106)
T ss_dssp ECCTTTSCC
T ss_pred EEcCchhhH
Confidence 988865433
No 275
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.02 E-value=3.1e-10 Score=97.98 Aligned_cols=84 Identities=24% Similarity=0.325 Sum_probs=69.2
Q ss_pred cceEEeeCC-CCCCCceeecCCC---------CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHH
Q psy12296 108 VPITLEVPP-HGKLGCGICKGPQ---------WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSV 176 (433)
Q Consensus 108 ~~v~L~~~~-~~~LG~~l~gg~~---------~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~ 176 (433)
..+.+.+.. ...|||.+.++.. ...|++|..|.++|+|+++| |++||+|++|||+++. ..++.+++.+
T Consensus 31 r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~-~~~~~~~~~~ 109 (128)
T 1nf3_C 31 RRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVS-GKSLDQVTDM 109 (128)
T ss_dssp EEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEEST-TCCHHHHHHH
T ss_pred EEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHH
Confidence 456666654 4789999976532 12489999999999999999 9999999999999998 7799999998
Q ss_pred hcCC-CeEEEEEEECCe
Q psy12296 177 MKSS-CLLELLVHRGVG 192 (433)
Q Consensus 177 Lr~~-~~v~L~V~R~~~ 192 (433)
++.. ..+.|+|.|++.
T Consensus 110 l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 110 MIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHTTTSEEEEEECCCC
T ss_pred HHcCCCeEEEEEEECCc
Confidence 8654 679999999864
No 276
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.01 E-value=4.2e-10 Score=94.98 Aligned_cols=85 Identities=21% Similarity=0.287 Sum_probs=70.1
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELL 186 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~ 186 (433)
..+.+.......|||.+..+.. ..|++|..|.++|||+++||++||+|++|||+++. ..++.+++..++. +..+.|+
T Consensus 15 ~~~~l~~~~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g~~v~l~ 92 (114)
T 2edz_A 15 RECKLSKQEGQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVD-KEEHAQVVELVRKSGNSVTLL 92 (114)
T ss_dssp EEEEEECCTTCCCSCEEECCTT-CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCS-SSCHHHHHHHHHHTCSEEEEE
T ss_pred EEEEEeCCCCCcccEEEEEecC-CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCEEEEE
Confidence 3455566667789998876433 46899999999999999999999999999999999 6778888888765 4899999
Q ss_pred EEECCeee
Q psy12296 187 VHRGVGLD 194 (433)
Q Consensus 187 V~R~~~~~ 194 (433)
|.|++...
T Consensus 93 v~R~~~~~ 100 (114)
T 2edz_A 93 VLDGDSYE 100 (114)
T ss_dssp EECHHHHH
T ss_pred EEECCcce
Confidence 99987553
No 277
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.01 E-value=5.2e-10 Score=94.11 Aligned_cols=76 Identities=25% Similarity=0.382 Sum_probs=64.5
Q ss_pred CCCCCceeec---CCC---CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEE
Q psy12296 117 HGKLGCGICK---GPQ---WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVH 188 (433)
Q Consensus 117 ~~~LG~~l~g---g~~---~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~ 188 (433)
...|||.+.+ +.+ ...|++|..|.++|||+++| |++||+|++|||+++. ..++.+++..++.. ..+.|+|.
T Consensus 14 ~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~~~~~g~~v~l~v~ 92 (113)
T 2g5m_B 14 SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLV-GVTQSFAASVLRNTKGRVRFMIG 92 (113)
T ss_dssp SSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECS-SCCHHHHHHHHHHSCSSCEEEEE
T ss_pred CCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHhcCCCeEEEEEE
Confidence 3679999887 332 24689999999999999999 9999999999999998 77788888887654 78999999
Q ss_pred ECCee
Q psy12296 189 RGVGL 193 (433)
Q Consensus 189 R~~~~ 193 (433)
|++..
T Consensus 93 R~~~~ 97 (113)
T 2g5m_B 93 RERPG 97 (113)
T ss_dssp ECCCC
T ss_pred eCCCC
Confidence 98753
No 278
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=7.3e-10 Score=95.06 Aligned_cols=71 Identities=28% Similarity=0.557 Sum_probs=60.6
Q ss_pred CeEeEEEEecCCC--CCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREH--TTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~--~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~V~R~g 76 (433)
.+|||++....+. ..|++|..|.++|||+++| |++||+|++|||++|.++ .++..+|+. +..|.|+|.|.+
T Consensus 32 ~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~g 107 (124)
T 1wh1_A 32 DKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNR--EEAVALLTSEENKNFSLLIARPE 107 (124)
T ss_dssp CCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSH--HHHHHHHTCSSCCSCCEEEEECS
T ss_pred CcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCEEEEEEEECC
Confidence 4799999974321 3699999999999999999 999999999999999864 677777764 678999999987
No 279
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.00 E-value=1.1e-09 Score=94.22 Aligned_cols=83 Identities=27% Similarity=0.433 Sum_probs=66.6
Q ss_pred cceEEeeCCCCCCCceeecCCC---------CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHh
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ---------WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVM 177 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~---------~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~L 177 (433)
..+.+.+.....|||.+.++.. ...|++|..|.++|||+++| |++||+|++|||+++. ..++.++++.+
T Consensus 26 ~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~l 104 (123)
T 2iwq_A 26 RRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLR-DASHEQAVEAI 104 (123)
T ss_dssp EEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHH
T ss_pred EEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHH
Confidence 3455555556778888865432 23589999999999999999 9999999999999999 66788888888
Q ss_pred cCC-CeEEEEEEECC
Q psy12296 178 KSS-CLLELLVHRGV 191 (433)
Q Consensus 178 r~~-~~v~L~V~R~~ 191 (433)
+.. ..+.|+|.|..
T Consensus 105 ~~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 105 RKAGNPVVFMVQSII 119 (123)
T ss_dssp HHCCSSEEEEEECCC
T ss_pred HcCCCeEEEEEEECC
Confidence 754 68999998874
No 280
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.00 E-value=1.3e-09 Score=91.26 Aligned_cols=81 Identities=27% Similarity=0.419 Sum_probs=67.0
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L 185 (433)
..+.+.+. ...|||.+.++. ..|++|..|.++++|+++| |++||+|++|||+++. ..++.+++..++. +..+.|
T Consensus 17 ~~v~l~~~-~~~lG~~l~~~~--~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~l~~~g~~v~l 92 (111)
T 2dlu_A 17 EEVELIND-GSGLGFGIVGGK--TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQ-GMTSEQVAQVLRNCGNSVRM 92 (111)
T ss_dssp EEEEEECC-SSCCCEEEECCS--SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCT-TSCHHHHHHHHHHHCSEEEE
T ss_pred EEEEEEeC-CCccCEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEE
Confidence 44555553 467999998653 3689999999999999999 9999999999999998 7778888888765 478999
Q ss_pred EEEECCe
Q psy12296 186 LVHRGVG 192 (433)
Q Consensus 186 ~V~R~~~ 192 (433)
+|.|++.
T Consensus 93 ~v~R~~~ 99 (111)
T 2dlu_A 93 LVARDPA 99 (111)
T ss_dssp EEEESCT
T ss_pred EEEeCCC
Confidence 9999864
No 281
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.00 E-value=1.4e-09 Score=89.66 Aligned_cols=79 Identities=18% Similarity=0.165 Sum_probs=66.7
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC---CeE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS---CLL 183 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~---~~v 183 (433)
..+.|.+.. ..||++|.++ ....+||..|.+|++|++.| |++||.|++|||+++. +++|.+++++|+.. ..+
T Consensus 7 k~V~l~K~~-~~LG~tI~~~--g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~-g~~h~evv~lLk~~~~g~~~ 82 (95)
T 3gge_A 7 KEVNVYKSE-DSLGLTITDN--GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIV-GWRHYDVAKKLKELKKEELF 82 (95)
T ss_dssp EEEEEECCS-SCCCEEEECS--SSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECT-TCCHHHHHHHHHHSCTTCEE
T ss_pred EEEEEEECC-CCceEEEEcC--CCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEcc-CCCHHHHHHHHHhCCCCCEE
Confidence 345666654 7899999853 23458999999999999988 9999999999999999 99999999999874 578
Q ss_pred EEEEEEC
Q psy12296 184 ELLVHRG 190 (433)
Q Consensus 184 ~L~V~R~ 190 (433)
+|.+.+.
T Consensus 83 ~L~lv~p 89 (95)
T 3gge_A 83 TMKLIEP 89 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEECc
Confidence 8888775
No 282
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.99 E-value=1.9e-09 Score=87.54 Aligned_cols=76 Identities=26% Similarity=0.347 Sum_probs=63.6
Q ss_pred CCCCCCceeecCCC----CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEE
Q psy12296 116 PHGKLGCGICKGPQ----WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHR 189 (433)
Q Consensus 116 ~~~~LG~~l~gg~~----~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R 189 (433)
....|||.+.++.. ...|++|..|.++++|+++| |++||+|++|||+++. ..++.+++..++.. ..+.|+|.|
T Consensus 13 ~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l~v~r 91 (97)
T 2iwn_A 13 NVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQ-GFTNQQAVEVLRHTGQTVLLTLMR 91 (97)
T ss_dssp BTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECT-TSCHHHHHHHHHTCCSEEEEEEEE
T ss_pred CCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEEe
Confidence 34669999876532 24689999999999999999 9999999999999999 77788888887654 789999998
Q ss_pred CCe
Q psy12296 190 GVG 192 (433)
Q Consensus 190 ~~~ 192 (433)
++.
T Consensus 92 ~g~ 94 (97)
T 2iwn_A 92 RGE 94 (97)
T ss_dssp EEE
T ss_pred CCC
Confidence 764
No 283
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.99 E-value=1.7e-09 Score=95.03 Aligned_cols=79 Identities=29% Similarity=0.344 Sum_probs=62.5
Q ss_pred CCCCceeecCCC------------CCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC--CeE
Q psy12296 118 GKLGCGICKGPQ------------WKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLL 183 (433)
Q Consensus 118 ~~LG~~l~gg~~------------~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v 183 (433)
..|||.+.++.+ ...|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.. ..+
T Consensus 38 ~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~-~~~~~~~~~~l~~~~g~~v 116 (139)
T 2vz5_A 38 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMT-MVTHDQARKRLTKRSEEVV 116 (139)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TCCHHHHHHHHCCTTCSEE
T ss_pred ccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcC-CCCHHHHHHHHHhCCCCEE
Confidence 357777765432 246999999999999999999999999999999999 77889999988763 789
Q ss_pred EEEEEECCeeeeec
Q psy12296 184 ELLVHRGVGLDLFP 197 (433)
Q Consensus 184 ~L~V~R~~~~~~~~ 197 (433)
.|+|.|++....+.
T Consensus 117 ~l~v~R~g~~~~v~ 130 (139)
T 2vz5_A 117 RLLVTRQSLQKAVQ 130 (139)
T ss_dssp EEEEEECC------
T ss_pred EEEEEECCEEEEEE
Confidence 99999998654443
No 284
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.99 E-value=8.1e-10 Score=107.18 Aligned_cols=87 Identities=26% Similarity=0.279 Sum_probs=75.6
Q ss_pred ccceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhh-cCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEE
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKD-AGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLE 184 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~-aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~ 184 (433)
...|.|.+....+|||.|.++.+...|++|..|.++++|++ +||++||+|++|||+++. ..++.+++.+++.. ..|.
T Consensus 78 ~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~-~~t~~e~v~~l~~~g~~V~ 156 (263)
T 1z87_A 78 RRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLS-SATHDEAVQALKKTGKEVV 156 (263)
T ss_dssp SEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCT-TSCHHHHHHHHHHCCSCCC
T ss_pred cEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECC-CcCHHHHHHHHhcCCCeEE
Confidence 34566777667899999998876667999999999999999 799999999999999999 88999999998875 7899
Q ss_pred EEEEECCeee
Q psy12296 185 LLVHRGVGLD 194 (433)
Q Consensus 185 L~V~R~~~~~ 194 (433)
|+|.|.....
T Consensus 157 L~V~R~~~~~ 166 (263)
T 1z87_A 157 LEVKYMKEVS 166 (263)
T ss_dssp EEEECCSSSS
T ss_pred EEEEeCcccc
Confidence 9999986543
No 285
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.99 E-value=1.6e-09 Score=86.93 Aligned_cols=78 Identities=23% Similarity=0.275 Sum_probs=61.0
Q ss_pred eEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC---CCeEEEE
Q psy12296 110 ITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS---SCLLELL 186 (433)
Q Consensus 110 v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~~v~L~ 186 (433)
+.|.+. ..+|||.+.+... ..+++|..+ +++||+ +||++||+|++|||+++. ..++.+++..++. +..+.|+
T Consensus 7 v~l~k~-~~g~G~~~~~~~~-~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~-~~~~~~~~~~l~~~~~g~~v~l~ 81 (88)
T 3bpu_A 7 VHIVKG-PMGFGFTIADSPG-GGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQ-ALTHNQVVDMLVESPKGSEVTLL 81 (88)
T ss_dssp EEEECB-TTBSSCEEEECTT-SSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECT-TSCHHHHHHHHHTSCTTCEEEEE
T ss_pred EEEEcC-CCceeEEEEecCC-CCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcC-CCCHHHHHHHHHhCCCCCEEEEE
Confidence 444453 3679999976433 468899887 899999 999999999999999999 6678888888864 4799999
Q ss_pred EEECCe
Q psy12296 187 VHRGVG 192 (433)
Q Consensus 187 V~R~~~ 192 (433)
|.|++.
T Consensus 82 v~R~g~ 87 (88)
T 3bpu_A 82 VQRQTR 87 (88)
T ss_dssp EEEECC
T ss_pred EEeCCc
Confidence 999763
No 286
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.99 E-value=8.3e-10 Score=89.12 Aligned_cols=69 Identities=28% Similarity=0.401 Sum_probs=60.0
Q ss_pred CCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECC
Q psy12296 116 PHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGV 191 (433)
Q Consensus 116 ~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~ 191 (433)
....+|+.+. .|++|..|.++++|+++| |++||+|++|||+++. ..+++++++.++.. ..+.|+|.+..
T Consensus 11 ~~~~~G~~~~------~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~-~~~~~~~~~~i~~~~~~v~L~v~~~~ 81 (88)
T 3e17_A 11 ANEEYGLRLG------SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTE-NMSLTDARKLIEKSRGKLQLVVLRDL 81 (88)
T ss_dssp TBCCCCEEEE------EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT-TCCHHHHHHHHHHTTTEEEEEECCC-
T ss_pred CCCCCCEEEe------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEeCCC
Confidence 3457888874 389999999999999999 9999999999999998 88999999999876 78999887663
No 287
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.99 E-value=8.9e-10 Score=114.91 Aligned_cols=72 Identities=25% Similarity=0.500 Sum_probs=65.9
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g 76 (433)
+++|||+|.+|.+ .|++|..|.+||||+++||++||+|++|||++|.++++.+++.+|+ .|..|+|+|.|++
T Consensus 10 ~~~lG~~i~gg~~--~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g 84 (468)
T 3shw_A 10 GDSVGLRLAGGND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 84 (468)
T ss_dssp CSSCCEEEEEETT--TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECH
T ss_pred CCccceEEEccCc--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 4789999998755 6999999999999999999999999999999999999999998886 4789999999976
No 288
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.98 E-value=1e-09 Score=101.25 Aligned_cols=70 Identities=21% Similarity=0.303 Sum_probs=62.4
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCC-CCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSG-LLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aG-L~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g 76 (433)
.+|||++.++ ..|++|..|.++|+|+++| |++||+|++|||++|.++++.+++.+++. +..+.|+|.|..
T Consensus 125 ~~lG~~~~~~---~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 125 KELGLSLSPN---EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPK 196 (206)
T ss_dssp CCCCEEEEEC---SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEEC
T ss_pred CccCeEEEcC---CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 5799999853 2589999999999999999 99999999999999999998888888875 678999998864
No 289
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.98 E-value=8.8e-10 Score=91.76 Aligned_cols=68 Identities=31% Similarity=0.360 Sum_probs=57.5
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc----CCcEEEEEEE
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH----SQNIISLKVR 73 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~----~g~~V~L~V~ 73 (433)
..++||.+... ..+++|..|.++|||++|||++||+|++|||+++...+..++...++ .++.|.|.|.
T Consensus 27 ~~g~G~~l~~~---~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 27 EEDYGFDIEEK---NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp SSSSSEEEEEE---TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCcccEEEEcc---CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 46899999862 35799999999999999999999999999999997666677777665 3788998885
No 290
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.98 E-value=1.7e-09 Score=90.63 Aligned_cols=85 Identities=26% Similarity=0.332 Sum_probs=68.5
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCC-CCCCEEEEEccEecCChhhHHHHHHHhcC--CCeEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGL-KCGDQILACNGVKFSPDVTFEHAVSVMKS--SCLLEL 185 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL-~~GD~Il~ING~~v~s~~s~~eav~~Lr~--~~~v~L 185 (433)
.+.+.+.....||+.+.+... ..|++|..|.+++||+++|| ++||+|++|||+++. .+++.++.+.++. +..+.|
T Consensus 4 ~v~l~~~~~~glG~~~~~~~~-~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~g~~v~l 81 (112)
T 1qau_A 4 SVRLFKRKVGGLGFLVKERVS-KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLV-DLSYDSALEVLRGIASETHVV 81 (112)
T ss_dssp EEEEECBTTTBTSEEEEECSS-SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECT-TSCHHHHHHHHHHSCSSSEEE
T ss_pred EEEEEcCCCCceeEEEEecCC-CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCcEEE
Confidence 345555566789999876432 45899999999999999997 999999999999999 5568888877764 378999
Q ss_pred EEEECCeeee
Q psy12296 186 LVHRGVGLDL 195 (433)
Q Consensus 186 ~V~R~~~~~~ 195 (433)
+|.|++....
T Consensus 82 ~v~R~g~~~~ 91 (112)
T 1qau_A 82 LILRGPEGFT 91 (112)
T ss_dssp EEEECCTTSE
T ss_pred EEEeCCcccc
Confidence 9999975433
No 291
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.98 E-value=3e-10 Score=97.65 Aligned_cols=72 Identities=25% Similarity=0.393 Sum_probs=63.9
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCC-CCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGL-LIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL-~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~V~R~g 76 (433)
.+|||.+.++.+ ..+++|..|.++|||+++|| ++||+|++|||+.+.++++.++..+++. +..+.|+|.|++
T Consensus 20 ~glG~~~~~~~~-~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g 94 (127)
T 1b8q_A 20 GGLGFLVKERVS-KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGP 94 (127)
T ss_dssp SCCSCCEEECTT-SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEECCC
T ss_pred CcEeEEEEecCC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEeCC
Confidence 689999997433 46899999999999999997 9999999999999999888889888874 678999999877
No 292
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.98 E-value=1.1e-09 Score=93.17 Aligned_cols=73 Identities=23% Similarity=0.304 Sum_probs=62.6
Q ss_pred CCCCceeecCCCCC-CceEEEEECCCChhhhc-CCCCCCEEEEEccEecCChhhHHHHHHHhcC-----CCeEEEEEEEC
Q psy12296 118 GKLGCGICKGPQWK-PGIFVQFTKDACVAKDA-GLKCGDQILACNGVKFSPDVTFEHAVSVMKS-----SCLLELLVHRG 190 (433)
Q Consensus 118 ~~LG~~l~gg~~~~-~GV~V~~V~~gspA~~a-GL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-----~~~v~L~V~R~ 190 (433)
.+|||.+.++.+.. ..++|..|.+++||+++ ||++||+|++|||+++. ..+|+++++.|+. +..+.|+|.|.
T Consensus 28 ~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~-~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 28 GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVT-DYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCT-TCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 47999998775433 34999999999999999 89999999999999999 8889999888764 47899999986
Q ss_pred C
Q psy12296 191 V 191 (433)
Q Consensus 191 ~ 191 (433)
.
T Consensus 107 ~ 107 (118)
T 1v6b_A 107 P 107 (118)
T ss_dssp C
T ss_pred C
Confidence 3
No 293
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.97 E-value=1e-09 Score=93.82 Aligned_cols=74 Identities=27% Similarity=0.360 Sum_probs=60.9
Q ss_pred CeEeEEEEe--c-CCCCCCeEEEEeCC--CCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEEEEEEEEcCc
Q psy12296 4 GTLGFSIRG--G-REHTTGVFVSNVEP--KSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNIISLKVRSVGM 77 (433)
Q Consensus 4 ~gLGfsI~g--G-~~~~~Gv~Vs~V~p--gSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V~L~V~R~g~ 77 (433)
+.|||.|.- . .+...|++|..|.+ +|||+++||++||+|++|||+++.++++.++..+++. +..|.|+|.|++.
T Consensus 27 g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~ 106 (118)
T 2yub_A 27 CRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPV 106 (118)
T ss_dssp SSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSS
T ss_pred CCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCE
Confidence 445655552 2 12347899999999 9999999999999999999999999988888888875 7889999999873
No 294
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.97 E-value=4e-09 Score=90.19 Aligned_cols=75 Identities=29% Similarity=0.377 Sum_probs=63.2
Q ss_pred CCCCCCceeecCCCC---CCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC---CCeEEEEEE
Q psy12296 116 PHGKLGCGICKGPQW---KPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS---SCLLELLVH 188 (433)
Q Consensus 116 ~~~~LG~~l~gg~~~---~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~~v~L~V~ 188 (433)
....|||.+.++... ..|++|..|.+++||+++| |++||+|++|||+++. ..++.++++.++. +..+.|+|.
T Consensus 39 ~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~-~~~~~~~~~~l~~~~~g~~v~l~v~ 117 (121)
T 2kom_A 39 GTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLV-GKSQEEVVSLLRSTKMEGTVSLLVF 117 (121)
T ss_dssp CTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECT-TSCHHHHHHHHHHCCSSCEEEEEEE
T ss_pred CCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcC-CCCHHHHHHHHhcCCCCCEEEEEEE
Confidence 456799998865421 2689999999999999999 9999999999999999 6678888888764 478999999
Q ss_pred ECC
Q psy12296 189 RGV 191 (433)
Q Consensus 189 R~~ 191 (433)
|++
T Consensus 118 R~g 120 (121)
T 2kom_A 118 RQE 120 (121)
T ss_dssp ECC
T ss_pred eCC
Confidence 975
No 295
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.97 E-value=2.8e-10 Score=96.24 Aligned_cols=70 Identities=37% Similarity=0.525 Sum_probs=59.9
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~V~R~g 76 (433)
+++|||.+.++ .+++|..|.++|+|+++||++||+|++|||+++.++++.++..+++. +..|.|+|.|..
T Consensus 25 ~~~~G~~l~~~----~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~~~ 96 (111)
T 1vae_A 25 EGDLGFTLRGN----TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSLL 96 (111)
T ss_dssp SSCCSCCEESS----SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECEE
T ss_pred CCcccEEEeCC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEecC
Confidence 46899998753 47999999999999999999999999999999998888888888863 456999997643
No 296
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.96 E-value=2.9e-09 Score=87.92 Aligned_cols=82 Identities=16% Similarity=0.213 Sum_probs=64.8
Q ss_pred cceEEeeCCCCCCCceeecCCC--CCCceEEEEECCCChhhh-cCCCCCCEEEEEccEecCChhhHHHHHHHhcC---CC
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ--WKPGIFVQFTKDACVAKD-AGLKCGDQILACNGVKFSPDVTFEHAVSVMKS---SC 181 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~--~~~GV~V~~V~~gspA~~-aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~ 181 (433)
..+.+.+.....|||.+..... ...+++|..|.++++|++ +||++||+|++|||+++. ..++++++++|+. +.
T Consensus 11 ~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~-~~~~~~~~~~l~~~~~g~ 89 (101)
T 2yt7_A 11 REVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLV-GLPLAACQAAVRETKSQT 89 (101)
T ss_dssp EEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCT-TSCHHHHHHHHHHTTTSS
T ss_pred EEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCC
Confidence 3455666555789999864221 123799999999999999 569999999999999997 6688888888865 47
Q ss_pred eEEEEEEEC
Q psy12296 182 LLELLVHRG 190 (433)
Q Consensus 182 ~v~L~V~R~ 190 (433)
.+.|+|.|.
T Consensus 90 ~v~l~v~R~ 98 (101)
T 2yt7_A 90 SVTLSIVHC 98 (101)
T ss_dssp EEEEEECCC
T ss_pred eEEEEEEeC
Confidence 899999886
No 297
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=3.2e-09 Score=89.89 Aligned_cols=81 Identities=26% Similarity=0.420 Sum_probs=63.9
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELLV 187 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~V 187 (433)
.+.+... ...||+.+.++. ..|++|..|.+++||+++||++||+|++|||+++. ..++.+++..++. ...+.|+|
T Consensus 22 ~v~l~~~-~~~lG~~~~~~~--~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~-~~~~~~~~~~~~~~g~~v~l~v 97 (117)
T 1uit_A 22 HVKVQKG-SEPLGISIVSGE--KGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLR-SATEQQARLIIGQQCDTITILA 97 (117)
T ss_dssp EEEEECS-SCCCCEEEEECT--TSCEEEEEECTTSHHHHHTCCTTCEECEETTEETT-TCCHHHHHHHTTSCCSEEEEEE
T ss_pred EEEEEeC-CCCccEEEEccC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEE
Confidence 3445443 367999987654 35899999999999999999999999999999999 5555566655543 48999999
Q ss_pred EECCee
Q psy12296 188 HRGVGL 193 (433)
Q Consensus 188 ~R~~~~ 193 (433)
.|++..
T Consensus 98 ~r~~~~ 103 (117)
T 1uit_A 98 QYNPHV 103 (117)
T ss_dssp CCCSCC
T ss_pred EECCch
Confidence 998754
No 298
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.96 E-value=1.3e-09 Score=89.24 Aligned_cols=80 Identities=24% Similarity=0.363 Sum_probs=63.7
Q ss_pred eEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC--CeEEEEE
Q psy12296 110 ITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLLELLV 187 (433)
Q Consensus 110 v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v~L~V 187 (433)
+.+... ..++||.+.++.. ..|++|..|.++|||+++||++||+|++|||+++. ..++.++.+.++.. ..+.|+|
T Consensus 13 ~~l~~~-~~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~~~~l~v 89 (98)
T 2jxo_A 13 CTMKKG-PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCME-GKQHGDVVSAIRAGGDETKLLVV 89 (98)
T ss_dssp EEEECT-TTCCCEEEECCCS-SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TCCHHHHHHHHHTTTTEEEEEEC
T ss_pred EEEEeC-CCcccEEEEecCC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCcEEEEEE
Confidence 344443 4679999876442 45899999999999999999999999999999999 56688888887764 4567888
Q ss_pred EECCe
Q psy12296 188 HRGVG 192 (433)
Q Consensus 188 ~R~~~ 192 (433)
.|++.
T Consensus 90 ~R~g~ 94 (98)
T 2jxo_A 90 DRETD 94 (98)
T ss_dssp CHHHH
T ss_pred ECCch
Confidence 88753
No 299
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.94 E-value=1.3e-09 Score=89.44 Aligned_cols=76 Identities=20% Similarity=0.191 Sum_probs=62.1
Q ss_pred CCCCCCceeecCCC-------CCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEEE
Q psy12296 116 PHGKLGCGICKGPQ-------WKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELLV 187 (433)
Q Consensus 116 ~~~~LG~~l~gg~~-------~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~V 187 (433)
....|||.+..+.. ...|++|..|.++|||+++||++||+|++|||+++. ..++.+++..++. ++.+.|+|
T Consensus 11 ~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g~~v~l~v 89 (99)
T 3khf_A 11 SGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVL-GLVHMDVVELLLKSGNKISLRT 89 (99)
T ss_dssp -CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TCCHHHHHHHHHHSCSEEEEEE
T ss_pred CCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHhcCCCEEEEEE
Confidence 46678988874321 012678999999999999999999999999999999 7788888888874 48999999
Q ss_pred EECCe
Q psy12296 188 HRGVG 192 (433)
Q Consensus 188 ~R~~~ 192 (433)
.|++.
T Consensus 90 ~r~~~ 94 (99)
T 3khf_A 90 TALEN 94 (99)
T ss_dssp ECSCS
T ss_pred EECCC
Confidence 99764
No 300
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.94 E-value=1.7e-09 Score=89.63 Aligned_cols=79 Identities=24% Similarity=0.279 Sum_probs=63.5
Q ss_pred cceEEeeCCCCCCCceeecC-------CCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC
Q psy12296 108 VPITLEVPPHGKLGCGICKG-------PQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS 180 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg-------~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~ 180 (433)
..+.+.+.....|||.+.+. .....+++|..|.+++||+++||++||+|++|||+++. ..++.++++.++..
T Consensus 17 ~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~-~~~~~~~~~~l~~~ 95 (104)
T 2z17_A 17 KLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTE-GFTYKQVVDLIRSS 95 (104)
T ss_dssp CEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECT-TCCHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcC-CCCHHHHHHHHHhC
Confidence 34556666667899999862 12346899999999999999999999999999999998 77888888887665
Q ss_pred -CeEEEEE
Q psy12296 181 -CLLELLV 187 (433)
Q Consensus 181 -~~v~L~V 187 (433)
..+.|+|
T Consensus 96 ~~~v~l~v 103 (104)
T 2z17_A 96 GNLLTIET 103 (104)
T ss_dssp TTEEEEEC
T ss_pred CCcEEEEE
Confidence 5666654
No 301
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=2.6e-09 Score=86.72 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=63.1
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
.+.|.+.....||+.+.+. ..+++|..|.+++||+++| |++||+|++|||+++ ..+++++++.++.. ..+.|+
T Consensus 9 ~v~l~k~~~~~lG~~i~~~---~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v--~~~~~~~~~~l~~~~~~v~l~ 83 (91)
T 2e7k_A 9 MVGIRKTAGEHLGVTFRVE---GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV--GSDPRALQELLRNASGSVILK 83 (91)
T ss_dssp BCCBCCCTTCCCCEEEEES---SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC--TTCHHHHHHHHHTCCSSBCEE
T ss_pred EEEEEECCCCcEeEEEEec---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC--CCCHHHHHHHHHcCCCeEEEE
Confidence 4555566678899999762 4689999999999999987 999999999999999 23778888887654 678888
Q ss_pred EEEC
Q psy12296 187 VHRG 190 (433)
Q Consensus 187 V~R~ 190 (433)
|.|.
T Consensus 84 v~~~ 87 (91)
T 2e7k_A 84 ILSG 87 (91)
T ss_dssp EECC
T ss_pred EEEC
Confidence 8875
No 302
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=1.9e-09 Score=88.84 Aligned_cols=77 Identities=25% Similarity=0.243 Sum_probs=63.1
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLV 187 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V 187 (433)
.+.+.. ....|||.+.. ..+++|..|.+++||+++||++||+|++|||+++. ..++.+++..++.. ..+.|+|
T Consensus 18 ~v~l~~-~~~g~G~~~~~----~~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~-~~~~~~~~~~l~~~~~~v~l~v 91 (100)
T 1whd_A 18 QITIRR-GKDGFGFTICC----DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVE-HWKCVELAHEIRSCPSEIILLV 91 (100)
T ss_dssp EEEEEC-CSSSSSCBCCC----SSSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECT-TCCHHHHHHHHHHCSSEEEEEE
T ss_pred EEEEEC-CCCeeeEEEeC----CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEE
Confidence 344444 34578988754 36799999999999999999999999999999999 67788888888754 6799999
Q ss_pred EECC
Q psy12296 188 HRGV 191 (433)
Q Consensus 188 ~R~~ 191 (433)
.|+.
T Consensus 92 ~R~~ 95 (100)
T 1whd_A 92 WRVS 95 (100)
T ss_dssp EECC
T ss_pred EECC
Confidence 9985
No 303
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=1.7e-09 Score=91.95 Aligned_cols=81 Identities=22% Similarity=0.256 Sum_probs=65.0
Q ss_pred ceEEeeCCCC--CCCceeecCCCC-CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEE
Q psy12296 109 PITLEVPPHG--KLGCGICKGPQW-KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLEL 185 (433)
Q Consensus 109 ~v~L~~~~~~--~LG~~l~gg~~~-~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L 185 (433)
.+.|.+.... .|||.+.+.... ..|++|..|.++++|+++||++||+|++|||+++. ..++.++.+.++. ..+.|
T Consensus 18 ~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~-~~~~~~~~~~l~~-~~v~l 95 (114)
T 2d8i_A 18 SIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAAD-ALNSSMLKDFLSQ-PSLGL 95 (114)
T ss_dssp EEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGG-GCCHHHHHHHHTS-SEEEE
T ss_pred EEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECC-CcCHHHHHHHHhC-CcEEE
Confidence 4455555443 689998753221 25899999999999999999999999999999999 6678888888875 48999
Q ss_pred EEEECC
Q psy12296 186 LVHRGV 191 (433)
Q Consensus 186 ~V~R~~ 191 (433)
+|.|..
T Consensus 96 ~v~R~p 101 (114)
T 2d8i_A 96 LVRTYP 101 (114)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999974
No 304
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=1e-09 Score=89.96 Aligned_cols=77 Identities=23% Similarity=0.281 Sum_probs=63.9
Q ss_pred ceEEeeCCC-CCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhc-CCCeEEEE
Q psy12296 109 PITLEVPPH-GKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMK-SSCLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~-~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr-~~~~v~L~ 186 (433)
.+.|.+... ..|||.+.+ ..+++|..|.+++||+ +||++||+|++|||+++. ..++.+++..++ .++.+.|+
T Consensus 11 ~v~l~~~~~~~~~G~~l~~----~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~-~~~~~~~~~~~~~~g~~v~l~ 84 (96)
T 2edv_A 11 TVKIDKDTLLQDYGFHISE----SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAE-DLSWERAVDILREAEDSLSIT 84 (96)
T ss_dssp EEEECCCSSSCSCSBCCCS----SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBST-TCCHHHHHHHHHHCSSCEEEE
T ss_pred EEEEEECCCCCcccEEEec----CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEE
Confidence 344444443 378998865 5689999999999996 999999999999999998 778899998887 45899999
Q ss_pred EEECC
Q psy12296 187 VHRGV 191 (433)
Q Consensus 187 V~R~~ 191 (433)
|.|++
T Consensus 85 v~R~~ 89 (96)
T 2edv_A 85 VVRCT 89 (96)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99985
No 305
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.92 E-value=3.3e-09 Score=97.16 Aligned_cols=74 Identities=31% Similarity=0.415 Sum_probs=64.1
Q ss_pred CCCCceeecCCC--------CCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEE
Q psy12296 118 GKLGCGICKGPQ--------WKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVH 188 (433)
Q Consensus 118 ~~LG~~l~gg~~--------~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~ 188 (433)
.+|||.|.|+.+ ...|++|..|.+++||++ ||++||+|++|||+++. ..++.+++..++.. ..+.|+|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFI-NIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECT-TCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEE
Confidence 468999988753 356999999999999999 99999999999999999 77899999988765 78999999
Q ss_pred E---CCee
Q psy12296 189 R---GVGL 193 (433)
Q Consensus 189 R---~~~~ 193 (433)
| ++..
T Consensus 80 r~~~~G~~ 87 (195)
T 2qbw_A 80 REVGNGAK 87 (195)
T ss_dssp EECSSSCE
T ss_pred EcCCCCCC
Confidence 9 6654
No 306
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.92 E-value=3.7e-09 Score=82.82 Aligned_cols=70 Identities=23% Similarity=0.394 Sum_probs=57.8
Q ss_pred CCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECC
Q psy12296 115 PPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGV 191 (433)
Q Consensus 115 ~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~ 191 (433)
.....||+.+. .|++|..|.++++|+++| |++||+|++|||+++. ..++.++...++.. ..+.|+|.|++
T Consensus 10 ~~~~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~v~l~v~R~g 81 (81)
T 2rcz_A 10 RKNEEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTE-NMSLTDAKTLIERSKGKLKMVVQRDE 81 (81)
T ss_dssp STTCCCCEEEE------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECT-TCCHHHHHHHHHTSTTEEEEEEEC--
T ss_pred CCCCCCCEEEe------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECC-CCCHHHHHHHHHCCCCeEEEEEEeCC
Confidence 34567888763 489999999999999999 9999999999999998 67788888877654 68899998863
No 307
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.92 E-value=3.2e-09 Score=89.57 Aligned_cols=78 Identities=24% Similarity=0.310 Sum_probs=62.5
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC--CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v~L~ 186 (433)
.+.|.+. ...+||.+.+ ..+++|..|.+++||+++||++||+|++|||+++. ..++.++++.++.. ..+.|+
T Consensus 26 ~v~l~k~-~~~~G~~l~~----~~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~-~~~~~dv~~~i~~~~~~~v~l~ 99 (109)
T 2vsv_A 26 SIRFTAE-EGDLGFTLRG----NAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCK-WLTLSEVMKLLKSFGEDEIEMK 99 (109)
T ss_dssp EEEECCG-GGCCCEEEES----SSSCEEEEECTTSHHHHTTCCTTCEEEEETTEECT-TCCHHHHHHHHHTTTTSCEEEE
T ss_pred EEEEEeC-CCceeEEEeC----CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCeEEEE
Confidence 3444443 4678888754 35789999999999999999999999999999999 67788888888764 459999
Q ss_pred EEECCe
Q psy12296 187 VHRGVG 192 (433)
Q Consensus 187 V~R~~~ 192 (433)
|.|...
T Consensus 100 V~~~~~ 105 (109)
T 2vsv_A 100 VVSLLD 105 (109)
T ss_dssp EESCC-
T ss_pred EEECCC
Confidence 988743
No 308
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.91 E-value=5.7e-09 Score=85.91 Aligned_cols=70 Identities=23% Similarity=0.285 Sum_probs=58.0
Q ss_pred CCCCceeecC-CCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEE
Q psy12296 118 GKLGCGICKG-PQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHR 189 (433)
Q Consensus 118 ~~LG~~l~gg-~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R 189 (433)
..|||.+... .+...|++|..|.++|||+++||++||+|++|||+++. ..+++++.+.++ ...++|+|+.
T Consensus 20 ~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~-~~~~~~l~~~l~-~~~l~ltV~~ 90 (94)
T 3kzd_A 20 DTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAAD-ALNSSMLKDFLS-QPSLGLLVRT 90 (94)
T ss_dssp -CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGG-GCCHHHHHHHHH-SSEEEEEEEE
T ss_pred CCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHh-CCeEEEEEEe
Confidence 4689988763 23346899999999999999999999999999999999 778888888876 4678887764
No 309
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.91 E-value=4.5e-09 Score=89.12 Aligned_cols=82 Identities=28% Similarity=0.427 Sum_probs=66.4
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L 185 (433)
..+.|.+.. .+|||.+.++.. ..|++|..|.+++||+++| |++||+|++|||+++. ..++.+++..++. ...+.|
T Consensus 16 ~~v~l~k~~-~glG~~l~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~-~~~~~~~~~~~~~~~~~v~l 92 (119)
T 1tp5_A 16 RRIVIHRGS-TGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLR-NASHEQAAIALKNAGQTVTI 92 (119)
T ss_dssp EEEEEECTT-SCCCEEEEECGG-GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECT-TCCHHHHHHHHHTSCSEEEE
T ss_pred EEEEEEECC-CCccEEEecCCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEE
Confidence 445566544 569999987543 3689999999999999999 9999999999999999 6666777777765 478999
Q ss_pred EEEECCe
Q psy12296 186 LVHRGVG 192 (433)
Q Consensus 186 ~V~R~~~ 192 (433)
+|.|++.
T Consensus 93 ~v~r~~~ 99 (119)
T 1tp5_A 93 IAQYKPE 99 (119)
T ss_dssp EEEECHH
T ss_pred EEEECCc
Confidence 9998753
No 310
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.91 E-value=5.5e-09 Score=89.89 Aligned_cols=75 Identities=28% Similarity=0.391 Sum_probs=62.3
Q ss_pred CCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhc---CCCeEEEEEEECC
Q psy12296 115 PPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMK---SSCLLELLVHRGV 191 (433)
Q Consensus 115 ~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr---~~~~v~L~V~R~~ 191 (433)
.....||+.+.++. ..|++|..|.+++||+++||++||+|++|||+++. ..++.+++..+. .+..+.|+|.|++
T Consensus 36 ~~~~~lG~~l~~~~--~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~-~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 36 RKGDSVGLRLAGGN--DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFT-NIIREEAVLFLLDLPKGEEVTILAQKKK 112 (124)
T ss_dssp ECSSCCCEEEEECT--TSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECS-SCCHHHHHHHHHHSCTTCEEEEEEEECH
T ss_pred CCCCceeEEEecCC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 34568999987654 36899999999999999999999999999999999 556677777655 3479999999986
Q ss_pred e
Q psy12296 192 G 192 (433)
Q Consensus 192 ~ 192 (433)
.
T Consensus 113 ~ 113 (124)
T 3tsv_A 113 D 113 (124)
T ss_dssp H
T ss_pred c
Confidence 4
No 311
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.91 E-value=5.2e-09 Score=96.42 Aligned_cols=83 Identities=20% Similarity=0.235 Sum_probs=71.4
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhc-CCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDA-GLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~a-GL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L 185 (433)
..+.+.+.....|||.+.++.+...+++|..|.+++||+++ ||++||+|++|||+++. ..++.+++.+++.. ..+.|
T Consensus 9 ~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~-~~~~~~~~~~~~~~g~~v~l 87 (200)
T 2qt5_A 9 TVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLA-KFRHDEIISLLKNVGERVVL 87 (200)
T ss_dssp EEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECT-TSCHHHHHHHHHTCCSEEEE
T ss_pred EEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCeEEE
Confidence 34556666778999999987766678999999999999999 99999999999999999 77788888888654 78999
Q ss_pred EEEECC
Q psy12296 186 LVHRGV 191 (433)
Q Consensus 186 ~V~R~~ 191 (433)
+|.|++
T Consensus 88 ~v~R~~ 93 (200)
T 2qt5_A 88 EVEYEL 93 (200)
T ss_dssp EEEEEC
T ss_pred EEeccC
Confidence 999875
No 312
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.90 E-value=3.8e-09 Score=85.13 Aligned_cols=71 Identities=23% Similarity=0.385 Sum_probs=57.4
Q ss_pred CCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCeee
Q psy12296 117 HGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVGLD 194 (433)
Q Consensus 117 ~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~~~ 194 (433)
...||+.+. .|++|..|.++++|+++| |++||+|++|||+++. .+++.++.+.++.. ..+.|+|.|++...
T Consensus 14 ~~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~v~l~v~r~g~~~ 86 (92)
T 3cyy_A 14 NEEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTE-NMSLTDAKTLIERSKGKLKMVVQRDERAT 86 (92)
T ss_dssp TSCCCEEEE------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECT-TCCHHHHHHHHHTTTTEEEEEEEC-----
T ss_pred CCCCCEEEe------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCcEEEEEEeCCcee
Confidence 456888763 589999999999999999 9999999999999998 77888888887754 68999999987543
No 313
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.42 E-value=1.7e-10 Score=97.78 Aligned_cols=79 Identities=29% Similarity=0.397 Sum_probs=66.0
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhh-cCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKD-AGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~-aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~ 186 (433)
.+.+.+....+|||.+.++.+...|++|..|.++|||++ +||++||+|++|||+++. ..++.+++..++.. ..+.|+
T Consensus 30 ~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~-~~~~~~~~~~l~~~~~~v~l~ 108 (112)
T 2lob_A 30 KVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLR-DTKHKEAVTILSQQRGEIEFE 108 (112)
Confidence 455666667789999988765556899999999999999 899999999999999998 77899999988764 557776
Q ss_pred EE
Q psy12296 187 VH 188 (433)
Q Consensus 187 V~ 188 (433)
|.
T Consensus 109 V~ 110 (112)
T 2lob_A 109 VV 110 (112)
Confidence 64
No 314
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.89 E-value=4.5e-09 Score=89.36 Aligned_cols=78 Identities=27% Similarity=0.268 Sum_probs=64.7
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC---CeEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS---CLLE 184 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~---~~v~ 184 (433)
..+.|.+. ...|||+|.++ ..|.+|..|.+ +++.+||++||+|++|||+++. .++|.|++++|+.. ..+.
T Consensus 14 ~~V~L~Kg-~~G~GFsI~~~---~~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~-~~~h~evv~~lk~~~~G~~v~ 86 (113)
T 3soe_A 14 VTIPLIKG-PKGFGFAIADS---PTGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQ-NLTHLQVVEVLKQFPVGADVP 86 (113)
T ss_dssp EEEEEECB-TTBSSEEEEEE---TTEEEEEEESC--GGGSTTCCTTCEEEEETTEECT-TSCHHHHHHHHHHSCTTCEEE
T ss_pred EEEEEEEC-CCcccEEEeCC---CCCcEEEEecC--hHHhCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCCCEEE
Confidence 34555665 46899999654 34778999986 5788999999999999999999 99999999999863 6899
Q ss_pred EEEEECCe
Q psy12296 185 LLVHRGVG 192 (433)
Q Consensus 185 L~V~R~~~ 192 (433)
|+|.|++.
T Consensus 87 L~V~R~g~ 94 (113)
T 3soe_A 87 LLILRGGP 94 (113)
T ss_dssp EEEEESSC
T ss_pred EEEEECCc
Confidence 99999974
No 315
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=1.3e-09 Score=93.82 Aligned_cols=60 Identities=32% Similarity=0.432 Sum_probs=54.7
Q ss_pred CceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEECCe
Q psy12296 132 PGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRGVG 192 (433)
Q Consensus 132 ~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~~~ 192 (433)
.+++|..|.+++||+++||++||+|++|||+++. ..++.+++++|+.. ..+.|+|.|++.
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~-~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVI-GKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECS-SCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 5799999999999999999999999999999998 78899999998875 899999998864
No 316
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=5e-09 Score=87.73 Aligned_cols=83 Identities=30% Similarity=0.424 Sum_probs=68.0
Q ss_pred ccceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEE
Q psy12296 107 VVPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLE 184 (433)
Q Consensus 107 ~~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~ 184 (433)
...+.|.+. ...|||.+.++.. ..|++|..|.++++|+++| |++||+|++|||+++. ..++.+++..++.. ..+.
T Consensus 16 ~~~v~l~k~-~~glG~~l~~~~~-~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~-~~~~~~~~~~~~~~~~~v~ 92 (113)
T 1um7_A 16 PRKIILHKG-STGLGFNIVGGED-GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLR-NATHEQAAAALKRAGQSVT 92 (113)
T ss_dssp EEEEEEECC-SSCSSBCCBCCST-TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCT-TCCHHHHHHHHHSCCSEEE
T ss_pred eEEEEEEEC-CCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCcEE
Confidence 344566554 4679999987543 4689999999999999999 9999999999999999 66788888887754 7899
Q ss_pred EEEEECCe
Q psy12296 185 LLVHRGVG 192 (433)
Q Consensus 185 L~V~R~~~ 192 (433)
|+|.|++.
T Consensus 93 l~v~r~~~ 100 (113)
T 1um7_A 93 IVAQYRPE 100 (113)
T ss_dssp EEEECCHH
T ss_pred EEEEECcc
Confidence 99988753
No 317
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=9.2e-09 Score=83.59 Aligned_cols=68 Identities=16% Similarity=0.295 Sum_probs=56.9
Q ss_pred CCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC-CeEEEEEEEC
Q psy12296 115 PPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS-CLLELLVHRG 190 (433)
Q Consensus 115 ~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~-~~v~L~V~R~ 190 (433)
.....|||.+.+ | +|..|.++|+|+++||++||+|++|||+++. ..++.++++.++.. ..+.|+|.+.
T Consensus 21 ~~~~~lG~~~~~------G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~-~~~~~~~~~~l~~~g~~v~l~v~p~ 89 (90)
T 1y7n_A 21 DLRYQLGFSVQN------G-IICSLMRGGIAERGGVRVGHRIIEINGQSVV-ATPHEKIVHILSNAVGEIHMKTMPA 89 (90)
T ss_dssp STTSCCCEEEET------T-EEEEECTTSHHHHHTCCSSCEEEEETTEECT-TSCHHHHHHHHHHCCEEEEEEEECC
T ss_pred CCccccCeEecC------C-EEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 345678988743 4 8999999999999999999999999999997 67888888888644 6888888654
No 318
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.86 E-value=3.7e-09 Score=90.77 Aligned_cols=89 Identities=24% Similarity=0.285 Sum_probs=71.9
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCC-CCCCEEEEEccEecCChhhHHHHHHHhcCC--CeEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGL-KCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLLE 184 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL-~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v~ 184 (433)
..+.+.+.....||+.+.+... ..+++|..|.++++|+++|| ++||+|++|||+++. ..++.++.+.++.. ..+.
T Consensus 10 ~~v~l~~~~~~glG~~~~~~~~-~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~g~~v~ 87 (127)
T 1b8q_A 10 ISVRLFKRKVGGLGFLVKERVS-KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLV-DLSYDSALEVLRGIASETHV 87 (127)
T ss_dssp EEEEEECTTTSCCSCCEEECTT-SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECS-SSCHHHHHHHHHSCCSSCEE
T ss_pred EEEEEEeCCCCcEeEEEEecCC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCeEE
Confidence 3455556556789999876432 45899999999999999998 999999999999999 66688888888763 7899
Q ss_pred EEEEECCeeeeecC
Q psy12296 185 LLVHRGVGLDLFPG 198 (433)
Q Consensus 185 L~V~R~~~~~~~~~ 198 (433)
|+|.|++....+..
T Consensus 88 l~v~R~g~~~~~~~ 101 (127)
T 1b8q_A 88 VLILRGPEGFTTHL 101 (127)
T ss_dssp EEEECCCCSEEECC
T ss_pred EEEEeCCceEEEEE
Confidence 99999987655543
No 319
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.86 E-value=9.7e-10 Score=103.69 Aligned_cols=73 Identities=30% Similarity=0.516 Sum_probs=63.0
Q ss_pred CCeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC-CcEE-EEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS-QNII-SLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~-g~~V-~L~V~R~g 76 (433)
.+||||.|.++.+ ..|++|..|.++|+|+++||++||+|++|||+.|.++++.++..+++. +..| .|+|.|.+
T Consensus 19 ~~glG~~l~~~~~-~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~~l~V~R~g 93 (216)
T 2krg_A 19 PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRET 93 (216)
T ss_dssp SSSSCEEECCCSS-SCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEEEEECCHHH
T ss_pred CCCceEEEEecCC-CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEEECC
Confidence 3689999987543 458999999999999999999999999999999998777888888765 7788 88887766
No 320
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.86 E-value=6.9e-09 Score=83.40 Aligned_cols=72 Identities=24% Similarity=0.259 Sum_probs=54.4
Q ss_pred eEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHH-HHHHHhcCCcEEEEEEEEcC
Q psy12296 5 TLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHS-EVLQLIHSQNIISLKVRSVG 76 (433)
Q Consensus 5 gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~-eav~lL~~g~~V~L~V~R~g 76 (433)
.+|+...-..+...|+.|..+.|+|+|+++||++||+|++|||+++.++.+. .++..++.++.++|+|.|++
T Consensus 6 ~~~~~p~~~~g~~~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 6 YVRLSQVKRDDKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp TEEEEEEEETTEEEEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETT
T ss_pred ccceEEEeeCCeEEEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 4666655322223478899999999999999999999999999999987432 22333345788999999987
No 321
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.85 E-value=1.1e-08 Score=87.69 Aligned_cols=74 Identities=27% Similarity=0.437 Sum_probs=60.3
Q ss_pred CCCCCceeecCCC--CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC--CeEEEEEEECC
Q psy12296 117 HGKLGCGICKGPQ--WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLLELLVHRGV 191 (433)
Q Consensus 117 ~~~LG~~l~gg~~--~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v~L~V~R~~ 191 (433)
...||+.+..... ...|++|..|.+++||+++| |++||+|++|||+++. ++.++...|+.. ..+.|+|.|++
T Consensus 31 ~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~---~~~~~~~~l~~~~g~~v~l~v~R~g 107 (124)
T 1wh1_A 31 QDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ---NREEAVALLTSEENKNFSLLIARPE 107 (124)
T ss_dssp TCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC---SHHHHHHHHTCSSCCSCCEEEEECS
T ss_pred CCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC---CHHHHHHHHHhCCCCEEEEEEEECC
Confidence 3468888875432 13689999999999999999 9999999999999998 466777777653 68999999987
Q ss_pred ee
Q psy12296 192 GL 193 (433)
Q Consensus 192 ~~ 193 (433)
..
T Consensus 108 ~~ 109 (124)
T 1wh1_A 108 LQ 109 (124)
T ss_dssp SC
T ss_pred EE
Confidence 54
No 322
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.84 E-value=1.3e-08 Score=88.72 Aligned_cols=57 Identities=23% Similarity=0.291 Sum_probs=49.1
Q ss_pred CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcC
Q psy12296 17 TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVG 76 (433)
Q Consensus 17 ~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g 76 (433)
..|++|..|.++|||+ +||++||+|++|||+++.++. ++...+. .|+.|+|+|.|++
T Consensus 56 ~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g 115 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASST--DLQSALYNHSIGDTIKITYYRNG 115 (134)
T ss_dssp CSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHH--HHHHHHHHSSTTCEEEEEEEETT
T ss_pred CCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHH--HHHHHHHhCCCCCEEEEEEEECC
Confidence 4799999999999999 999999999999999999874 3444443 4789999999987
No 323
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.83 E-value=7.5e-09 Score=88.78 Aligned_cols=84 Identities=23% Similarity=0.315 Sum_probs=67.0
Q ss_pred ceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC--CeEEEE
Q psy12296 109 PITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLLELL 186 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v~L~ 186 (433)
.+.+... ..+|||.+.++.. ..|++|..|.++++|+++||++||+|++|||+++. .+++.++...++.. ..+.|+
T Consensus 12 ~v~l~~~-~~g~G~~l~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~l~~~~~~~~~l~ 88 (128)
T 2kjd_A 12 LCTMKKG-PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCME-GKQHGDVVSAIRAGGDETKLLV 88 (128)
T ss_dssp EEEEECC-SSSCCEEEEECSS-SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECT-TCCHHHHHHHHHTTCSEEEEEE
T ss_pred EEEEecC-CCcccEEEEecCC-CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCCEEEEE
Confidence 3444444 3579999876543 45899999999999999999999999999999999 66688888887764 567799
Q ss_pred EEECCeeee
Q psy12296 187 VHRGVGLDL 195 (433)
Q Consensus 187 V~R~~~~~~ 195 (433)
|.|++....
T Consensus 89 v~R~g~~~~ 97 (128)
T 2kjd_A 89 VDRETDEFF 97 (128)
T ss_dssp ECHHHHHHH
T ss_pred EEeCCcceE
Confidence 999875543
No 324
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=1.2e-08 Score=83.67 Aligned_cols=78 Identities=24% Similarity=0.362 Sum_probs=62.6
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC---CCeEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS---SCLLE 184 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~~v~ 184 (433)
..+.+.+. ...|||.+... ..|++|..|.++ |+++||++||+|++|||+++. ..+|.+++++|+. +..+.
T Consensus 12 ~~v~l~~~-~~g~G~~i~~~---~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~-~~~~~~~~~~l~~~~~g~~v~ 84 (96)
T 1ujv_A 12 MTLTIVKG-AQGFGFTIADS---PTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQ-NLSHTEVVDILKDCPIGSETS 84 (96)
T ss_dssp EEEEEECC-SSSSSEEEEEE---TTEEEEEEESCG--GGSTTCCSSCEEEEETTEECS-SCCHHHHHHHHHHSCTTSEEE
T ss_pred EEEEEEeC-CCceeEEEEcC---CCCEEEEEEecc--cccCCCCCCCEEEEECCEECC-CCCHHHHHHHHHcCCCCCEEE
Confidence 34445553 46799998642 348999999873 778999999999999999999 7788999888875 47899
Q ss_pred EEEEECCe
Q psy12296 185 LLVHRGVG 192 (433)
Q Consensus 185 L~V~R~~~ 192 (433)
|+|.|++.
T Consensus 85 l~v~R~g~ 92 (96)
T 1ujv_A 85 LIIHRGSG 92 (96)
T ss_dssp EEEECCSS
T ss_pred EEEEECCC
Confidence 99999864
No 325
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.79 E-value=1.8e-08 Score=92.73 Aligned_cols=84 Identities=23% Similarity=0.363 Sum_probs=69.6
Q ss_pred ceEEeeCCCCCCCceeecCCC----CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC---
Q psy12296 109 PITLEVPPHGKLGCGICKGPQ----WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS--- 180 (433)
Q Consensus 109 ~v~L~~~~~~~LG~~l~gg~~----~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--- 180 (433)
.+.|.+.....|||.+.++.. ...+++|..|.+++||+++| |++||+|++|||+++. ..++.++...++..
T Consensus 9 ~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~-~~~~~~~~~~l~~~~~g 87 (196)
T 1p1d_A 9 EVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTE-DSTFEEANQLLRDSSIT 87 (196)
T ss_dssp EEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCST-TSCHHHHHHHHHTCCSS
T ss_pred EEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCC
Confidence 455666667889999998632 24579999999999999999 9999999999999998 66777887777653
Q ss_pred CeEEEEEEECCee
Q psy12296 181 CLLELLVHRGVGL 193 (433)
Q Consensus 181 ~~v~L~V~R~~~~ 193 (433)
..+.|+|.|++..
T Consensus 88 ~~v~l~v~R~~~~ 100 (196)
T 1p1d_A 88 SKVTLEIEFDVAE 100 (196)
T ss_dssp SEEEEEEEECSCS
T ss_pred CeEEEEEEecCCC
Confidence 6899999998753
No 326
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.79 E-value=1.3e-08 Score=81.73 Aligned_cols=65 Identities=23% Similarity=0.244 Sum_probs=55.5
Q ss_pred CceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeee
Q psy12296 132 PGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLF 196 (433)
Q Consensus 132 ~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~ 196 (433)
.|+.|..+.++++|+++||++||+|++|||+++.+..++.+++..++.++.+.|+|.|++....+
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~ 83 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDV 83 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEEEEE
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEE
Confidence 37788898888999999999999999999999997777777777666678999999999865443
No 327
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.78 E-value=2.6e-08 Score=82.12 Aligned_cols=57 Identities=25% Similarity=0.401 Sum_probs=48.7
Q ss_pred CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcC
Q psy12296 17 TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVG 76 (433)
Q Consensus 17 ~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g 76 (433)
..|++|..|.++|||++ ||++||+|++|||+++.++. ++...+. .+..+.|+|.|++
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~--dl~~~l~~~~~g~~v~l~v~R~g 65 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQ--EFIDYIHSKKVGDTVKINYKHGD 65 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHH--HHHHHHHTSCTTCEEEEEEEETT
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHH--HHHHHHHhCCCCCEEEEEEEECC
Confidence 46999999999999996 99999999999999999874 4444443 4789999999987
No 328
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.77 E-value=1.5e-08 Score=85.12 Aligned_cols=58 Identities=28% Similarity=0.444 Sum_probs=51.4
Q ss_pred CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcC
Q psy12296 17 TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVG 76 (433)
Q Consensus 17 ~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g 76 (433)
..|++|..|.++|||+++||++||+|++|||+++.++ .++...+..++.+.|+|.|++
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~~v~l~v~R~g 91 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA--EDVYEAVRTQSQLAVQIRRGR 91 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHHCSSEEEEEEETT
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHhCCCeEEEEEEECC
Confidence 4789999999999999999999999999999999875 556666766788999999977
No 329
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.77 E-value=8.1e-09 Score=89.43 Aligned_cols=76 Identities=18% Similarity=0.295 Sum_probs=64.0
Q ss_pred eEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcC---CCeEEE
Q psy12296 110 ITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKS---SCLLEL 185 (433)
Q Consensus 110 v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~~v~L 185 (433)
+.+.. ....|||.+.+. ..+++|..|.+++||+++| |++||+|++|||+++. ..++.++++.|+. +..+.|
T Consensus 31 ~~l~k-~~~glG~~i~~~---~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~-~~s~~d~~~~l~~~~~G~~v~l 105 (126)
T 1wif_A 31 TKLTV-GNLGLGLVVIQN---GPYLQISHLINKGAAASDGILQPGDVLISVGHANVL-GYTLREFLKLLQNITIGTVLQI 105 (126)
T ss_dssp EEEEC-CTTCCCCCEEEE---TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCT-TCCHHHHHHHHTSCCSSCEEEE
T ss_pred EEEec-CCceEeEEEEcC---CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcC-CCCHHHHHHHHhcCCCCCEEEE
Confidence 34443 456799988652 3578999999999999999 9999999999999997 7789999999876 378999
Q ss_pred EEEEC
Q psy12296 186 LVHRG 190 (433)
Q Consensus 186 ~V~R~ 190 (433)
+|.|+
T Consensus 106 ~V~R~ 110 (126)
T 1wif_A 106 KAYRG 110 (126)
T ss_dssp EEESS
T ss_pred EEEEC
Confidence 99998
No 330
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.75 E-value=4e-08 Score=81.05 Aligned_cols=66 Identities=23% Similarity=0.262 Sum_probs=55.5
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeec
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFP 197 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~ 197 (433)
..|++|..|.+++||+. ||++||+|++|||+++.+..++.+++...+.++.+.|+|.|++....+.
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~ 71 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQAD 71 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEE
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEE
Confidence 46899999999999995 9999999999999999966667666665555689999999998765543
No 331
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.74 E-value=2.1e-08 Score=84.15 Aligned_cols=58 Identities=33% Similarity=0.642 Sum_probs=51.1
Q ss_pred CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcC
Q psy12296 17 TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVG 76 (433)
Q Consensus 17 ~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g 76 (433)
..|++|..|.++|||+++||++||+|++|||+++.++ .++...+..++.+.|+|.|++
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~g~~v~l~v~R~g 91 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDS--SELQEAVLTESPLLLEVRRGN 91 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHHCSSEEEEEEETT
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHhCCCeEEEEEEECC
Confidence 4689999999999999999999999999999999876 456666666788999999977
No 332
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.73 E-value=3.8e-08 Score=81.91 Aligned_cols=72 Identities=24% Similarity=0.259 Sum_probs=54.0
Q ss_pred eEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHH-HHHHHhcCCcEEEEEEEEcC
Q psy12296 5 TLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHS-EVLQLIHSQNIISLKVRSVG 76 (433)
Q Consensus 5 gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~-eav~lL~~g~~V~L~V~R~g 76 (433)
.+|+....-.....|+.|..+.|+|+|+++||++||+|++|||+++.++.+. .++..++.++.+.|+|.|++
T Consensus 24 ~~g~~~~~~~~~~~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 24 YVRLSQVKRDDKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp HEEEEEEEETTEEEEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETT
T ss_pred hceeEEEecCCcEEEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECC
Confidence 3566544311112467788888888999999999999999999999998653 33444456789999999987
No 333
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.73 E-value=1.7e-08 Score=86.15 Aligned_cols=76 Identities=18% Similarity=0.258 Sum_probs=59.7
Q ss_pred CCCCceeecCC---CCCCceEEEEECC--CChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEEEEECC
Q psy12296 118 GKLGCGICKGP---QWKPGIFVQFTKD--ACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELLVHRGV 191 (433)
Q Consensus 118 ~~LG~~l~gg~---~~~~GV~V~~V~~--gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~V~R~~ 191 (433)
+.+||.+.... ....|++|..|.+ ++||+++||++||+|++|||+++. ..++.++...++. ++.+.|+|.|++
T Consensus 27 g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~-~~~~~dl~~~l~~~g~~v~l~v~R~g 105 (118)
T 2yub_A 27 CRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVR-TLRVEEVEDAIKQTSQTLQLLIEHDP 105 (118)
T ss_dssp SSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTT-TSCHHHHHHHHHCCSSCEEEEEEECS
T ss_pred CCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECC-CcCHHHHHHHHHhCCCEEEEEEEECC
Confidence 45666665322 2346899999999 999999999999999999999999 4455777777665 478999999997
Q ss_pred eee
Q psy12296 192 GLD 194 (433)
Q Consensus 192 ~~~ 194 (433)
...
T Consensus 106 ~~~ 108 (118)
T 2yub_A 106 VPQ 108 (118)
T ss_dssp SCC
T ss_pred EEE
Confidence 643
No 334
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.73 E-value=4.4e-09 Score=85.69 Aligned_cols=56 Identities=23% Similarity=0.445 Sum_probs=48.9
Q ss_pred CCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcC
Q psy12296 18 TGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVG 76 (433)
Q Consensus 18 ~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g 76 (433)
.|++|..|.++|||++ ||++||+|++|||+++.++ .++..++. .|+.|+|+|.|++
T Consensus 1 ~Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g 59 (91)
T 2kjp_A 1 NGIYASSVVENMPAKG-KIEVGDKIISADGKNYQSA--EKLIDYISSKKAGDKVTLKIEREE 59 (91)
T ss_dssp CCSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSH--HHHHHHHSSCCSSCEECEEEESSS
T ss_pred CceEEEEECCCChHHH-cCCCCCEEEEECCEECCCH--HHHHHHHHcCCCCCEEEEEEEECC
Confidence 3789999999999999 9999999999999999986 45666665 3788999999987
No 335
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.73 E-value=7.3e-08 Score=83.86 Aligned_cols=66 Identities=12% Similarity=0.101 Sum_probs=56.4
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeec
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFP 197 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~ 197 (433)
..|++|..|.++|||+ +||++||+|++|||+++.+..++..++...+.++.+.|+|.|++....+.
T Consensus 56 ~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 121 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTS 121 (134)
T ss_dssp CSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEETTEEEEEE
T ss_pred CCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEE
Confidence 4689999999999999 99999999999999999977777777666555689999999998765443
No 336
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.73 E-value=9.7e-09 Score=86.73 Aligned_cols=75 Identities=29% Similarity=0.366 Sum_probs=61.2
Q ss_pred eEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCC--CeEEEEE
Q psy12296 110 ITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLLELLV 187 (433)
Q Consensus 110 v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v~L~V 187 (433)
+.+.+ ....|||.+.+ ..+++|..|.++++|+++||++||+|++|||+++. ..+++++++.++.. ..+.|+|
T Consensus 19 v~l~~-~~~~~G~~l~~----~~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~-~~~~~d~~~~i~~~~~~~v~l~V 92 (111)
T 1vae_A 19 IHFTV-EEGDLGFTLRG----NTPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCK-WLTVSEVMKLLKSFGGEEVEMKV 92 (111)
T ss_dssp CCEEC-CSSCCSCCEES----SSSCEECCCCTTSSHHHHHCCTTCEEEEETTEECS-SCCHHHHHHHHHHTTTSEECEEE
T ss_pred EEEEc-CCCcccEEEeC----CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhCCCceEEEEE
Confidence 44444 35678998864 35789999999999999999999999999999999 67788888887653 5699998
Q ss_pred EEC
Q psy12296 188 HRG 190 (433)
Q Consensus 188 ~R~ 190 (433)
.|.
T Consensus 93 ~~~ 95 (111)
T 1vae_A 93 VSL 95 (111)
T ss_dssp ECE
T ss_pred Eec
Confidence 775
No 337
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.73 E-value=1.1e-08 Score=83.60 Aligned_cols=59 Identities=24% Similarity=0.431 Sum_probs=50.1
Q ss_pred CCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcC
Q psy12296 15 EHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVG 76 (433)
Q Consensus 15 ~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g 76 (433)
+...|++|..|.++|||++ ||++||+|++|||+++.++ .++..++. .|+.+.|+|.|++
T Consensus 2 ~~~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g 63 (94)
T 2kl1_A 2 NEAKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTS--EQIVSYVREKQAGDRVRVTFIRDR 63 (94)
T ss_dssp CCCCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCH--HHHHHHHHHSCTTCCEEEEEEETT
T ss_pred CCCCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECC
Confidence 3457899999999999999 9999999999999999986 34555553 4789999999987
No 338
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.71 E-value=3.8e-08 Score=98.83 Aligned_cols=71 Identities=30% Similarity=0.442 Sum_probs=58.6
Q ss_pred CeEeEEEEe---------cCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEE
Q psy12296 4 GTLGFSIRG---------GREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLK 71 (433)
Q Consensus 4 ~gLGfsI~g---------G~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~ 71 (433)
+.||+.+.. |++...|++|..|.++|||+++||++||+|++|||++|.++. ++...+. .|+.|+|+
T Consensus 240 ~~lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~--~l~~~l~~~~~g~~v~l~ 317 (345)
T 3stj_A 240 GLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFA--ELRSRIATTEPGTKVKLG 317 (345)
T ss_dssp EECCEEEEECCHHHHHHTTCSCCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHH--HHHHHHHTSCTTCEEEEE
T ss_pred cccceeeEeecHHHHHhcCCCCCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCEEEEE
Confidence 357777764 334458999999999999999999999999999999999874 4555553 48999999
Q ss_pred EEEcC
Q psy12296 72 VRSVG 76 (433)
Q Consensus 72 V~R~g 76 (433)
|.|++
T Consensus 318 v~R~g 322 (345)
T 3stj_A 318 LLRNG 322 (345)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99988
No 339
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.69 E-value=2.9e-08 Score=82.62 Aligned_cols=70 Identities=23% Similarity=0.266 Sum_probs=56.0
Q ss_pred CCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC----CCeEEEEEEE
Q psy12296 116 PHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS----SCLLELLVHR 189 (433)
Q Consensus 116 ~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~----~~~v~L~V~R 189 (433)
....+||.+.. ...+.+|..|.++|||+++||++||+|++|||+++. ..+++++...++. ++.+.|+|..
T Consensus 26 ~~~g~G~~l~~---~~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~-~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 26 QEEDYGFDIEE---KNKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVF-LRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp CSSSSSEEEEE---ETTEEEEEEECTTSHHHHHTCCTTCBEEEETTEEST-TSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCcccEEEEc---cCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcC-cCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 34568888753 245788999999999999999999999999999986 5567777666654 5889888853
No 340
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.69 E-value=3e-08 Score=101.29 Aligned_cols=73 Identities=29% Similarity=0.425 Sum_probs=64.6
Q ss_pred CCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC---CCeEEEEEEECCee
Q psy12296 118 GKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS---SCLLELLVHRGVGL 193 (433)
Q Consensus 118 ~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~~v~L~V~R~~~~ 193 (433)
.+||+.+.++. ..|++|..|.+||||+++||++||+|++|||+++. ..++++++..++. +..+.|+|.|++..
T Consensus 19 ~~lG~~i~gg~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~-~~~~~e~~~~l~~~~~g~~v~l~v~r~~~~ 94 (391)
T 3tsz_A 19 DSVGLRLAGGN--DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFT-NIIREEAVLFLLDLPKGEEVTILAQKKKDV 94 (391)
T ss_dssp SSCCEEEEEET--TTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECT-TCCHHHHHHHHHHSCTTSEEEEEEEECHHH
T ss_pred CceeEEEEecC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhhcCCCeEEEEEeeCCcc
Confidence 46999998754 37999999999999999999999999999999999 7789999999873 47999999998643
No 341
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.68 E-value=6.7e-08 Score=81.05 Aligned_cols=65 Identities=22% Similarity=0.244 Sum_probs=54.2
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeecC
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFPG 198 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~~ 198 (433)
..|++|..|.++|||+++||++||+|++|||+++.+ +.++...++.+..+.|+|.|++....+..
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~l~~~~~v~l~v~R~g~~~~~~v 98 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN---AEDVYEAVRTQSQLAVQIRRGRETLTLYV 98 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCS---HHHHHHHHHHCSSEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCC---HHHHHHHHhCCCeEEEEEEECCEEEEEEE
Confidence 468999999999999999999999999999999984 44555555556889999999987765543
No 342
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.68 E-value=6.5e-08 Score=80.46 Aligned_cols=64 Identities=23% Similarity=0.259 Sum_probs=55.8
Q ss_pred ceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeee
Q psy12296 133 GIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLF 196 (433)
Q Consensus 133 GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~ 196 (433)
|++|..+.++++|+++||++||+|++|||+++.+..++.+++..++.++.+.|+|.|++....+
T Consensus 38 G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~ 101 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDV 101 (105)
T ss_dssp EEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETTEEEEE
T ss_pred EEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECCEEEEE
Confidence 6778888888889999999999999999999998888888888777778999999999876443
No 343
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.66 E-value=3.7e-08 Score=80.42 Aligned_cols=67 Identities=16% Similarity=0.121 Sum_probs=56.0
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeecC
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFPG 198 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~~ 198 (433)
..|++|..|.++|||++ ||++||+|++|||+++.+..++.+++...+.++.+.|+|.|++....+..
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 70 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRKQHEAEL 70 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEE
Confidence 46899999999999998 99999999999999999666666666655456899999999998655543
No 344
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.66 E-value=1e-07 Score=85.37 Aligned_cols=82 Identities=26% Similarity=0.306 Sum_probs=62.8
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhc--CCCeEEE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMK--SSCLLEL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr--~~~~v~L 185 (433)
..+.+.+.....||+.+... ..|++|..|.+++||+++||++||+|++|||+++. ..+...+...++ .+..+.|
T Consensus 6 r~v~l~k~~~~~lG~~~~~~---~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~-~~~~~~~~~~~~~~~~~~v~l 81 (166)
T 1w9e_A 6 REVILCKDQDGKIGLRLKSI---DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCA-GWSSDKAHKVLKQAFGEKITM 81 (166)
T ss_dssp EEEEEECCTTSCCSEEEEEE---TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECT-TCCHHHHHHHHHHCCSSEEEE
T ss_pred EEEEEEeCCCCcEeEEEEeC---CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHhcCCCCEEEE
Confidence 34666676778899998642 46899999999999999999999999999999999 444434444444 3468999
Q ss_pred EEEECCee
Q psy12296 186 LVHRGVGL 193 (433)
Q Consensus 186 ~V~R~~~~ 193 (433)
+|+|++..
T Consensus 82 ~vr~~~~~ 89 (166)
T 1w9e_A 82 TIRDRPFE 89 (166)
T ss_dssp EEECCTTC
T ss_pred EEEcCCCc
Confidence 99555333
No 345
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.65 E-value=6.9e-08 Score=95.57 Aligned_cols=71 Identities=25% Similarity=0.453 Sum_probs=58.0
Q ss_pred CeEeEEEEe---------cCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEE
Q psy12296 4 GTLGFSIRG---------GREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLK 71 (433)
Q Consensus 4 ~gLGfsI~g---------G~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~ 71 (433)
..||+.+.. |++...|++|..|.++|||+++||++||+|++|||+++.++ .++..++. .|+.|+|+
T Consensus 221 ~~lGi~~~~~~~~~~~~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~ 298 (318)
T 1te0_A 221 GYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISA--LETMDQVAEIRPGSVIPVV 298 (318)
T ss_dssp EECCEEEEECSCCCSSSSCSSSCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCH--HHHHHHHHTSCTTCEEEEE
T ss_pred ccceeEeeecchhHHHhccCCCCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEE
Confidence 357777764 23345799999999999999999999999999999999987 44555554 47899999
Q ss_pred EEEcC
Q psy12296 72 VRSVG 76 (433)
Q Consensus 72 V~R~g 76 (433)
|.|++
T Consensus 299 v~R~g 303 (318)
T 1te0_A 299 VMRDD 303 (318)
T ss_dssp EESSS
T ss_pred EEECC
Confidence 99987
No 346
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.64 E-value=3.7e-08 Score=101.04 Aligned_cols=57 Identities=19% Similarity=0.279 Sum_probs=46.4
Q ss_pred ceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeEEEEEEECCee
Q psy12296 133 GIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLLELLVHRGVGL 193 (433)
Q Consensus 133 GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v~L~V~R~~~~ 193 (433)
.++|..|.++|||+++||++||+|++|||+++. ..+ +..+++. +..++|+|.|++..
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~-~~~---~~~~l~~~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYIT-KKV---ESELLQGSTRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBC-TTT---GGGGTSCSCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEcc-chh---HHHHhhCCCCEEEEEEEeCCcc
Confidence 378999999999999999999999999999998 444 3444444 36899999998653
No 347
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.62 E-value=4.6e-08 Score=102.00 Aligned_cols=72 Identities=29% Similarity=0.423 Sum_probs=64.4
Q ss_pred CCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC---CCeEEEEEEECCe
Q psy12296 118 GKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS---SCLLELLVHRGVG 192 (433)
Q Consensus 118 ~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~~v~L~V~R~~~ 192 (433)
..|||.+.++. ..|++|..|.+||||+++||++||+|++|||+++. ..++++++..|+. +..++|+|.|++.
T Consensus 11 ~~lG~~i~gg~--~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~-~~t~~e~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 11 DSVGLRLAGGN--DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFT-NIIREEAVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp SSCCEEEEEET--TTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECT-TCCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CccceEEEccC--cCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 78999998765 36999999999999999999999999999999999 7789999998875 4799999999754
No 348
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.62 E-value=1.2e-07 Score=79.42 Aligned_cols=65 Identities=26% Similarity=0.308 Sum_probs=53.5
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeecC
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFPG 198 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~~ 198 (433)
..|++|..|.+++||+++||++||+|++|||+++.+.. ++...++.++.+.|+|.|++....+..
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~---~~~~~l~~g~~v~l~v~R~g~~~~~~v 98 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSS---ELQEAVLTESPLLLEVRRGNDDLLFSI 98 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHH---HHHHHHHHCSSEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHH---HHHHHHhCCCeEEEEEEECCEEEEEEE
Confidence 46899999999999999999999999999999999544 444444456789999999987655543
No 349
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.60 E-value=1.3e-07 Score=93.75 Aligned_cols=70 Identities=19% Similarity=0.379 Sum_probs=57.8
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEE-cC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRS-VG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R-~g 76 (433)
..||+.+.. .+...|++|..|.++|||+++||++||+|++|||+++.++. ++...+. .|+.|+|+|.| ++
T Consensus 229 ~~lGi~~~~-~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~~g 302 (324)
T 1y8t_A 229 ASLGVQVTN-DKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSAD--ALVAAVRSKAPGATVALTFQDPSG 302 (324)
T ss_dssp EECCEEEES-CSSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHH--HHHHHHHTSCTTCEEEEEEECSSC
T ss_pred cccceEeee-ccCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCEEEEEEEECCC
Confidence 467888764 33457999999999999999999999999999999999874 4554443 47899999999 76
No 350
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.60 E-value=1.1e-07 Score=77.78 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=49.3
Q ss_pred EEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCe
Q psy12296 135 FVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVG 192 (433)
Q Consensus 135 ~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~ 192 (433)
+|..|.++|+|+++||++||+|++|||+.+.+..++.+++.....++.+.|+|.|++.
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 5889999999999999999999999999999666666666554444789999999973
No 351
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.59 E-value=8.5e-08 Score=78.48 Aligned_cols=55 Identities=16% Similarity=0.258 Sum_probs=46.4
Q ss_pred eEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcC
Q psy12296 20 VFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVG 76 (433)
Q Consensus 20 v~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g 76 (433)
.+|..|.++|||+++||++||+|++|||+.+.++. ++...+. .+..+.|+|.|++
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~--d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWD--AVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHH--HHHHHHHHTTTCSEEEEEEECTT
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHH--HHHHHHHHhcCCCcEEEEEEECC
Confidence 46889999999999999999999999999999874 4554443 2478999999976
No 352
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.59 E-value=1.3e-08 Score=82.81 Aligned_cols=60 Identities=20% Similarity=0.353 Sum_probs=48.9
Q ss_pred ceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC---CCeEEEEEEECCeeeee
Q psy12296 133 GIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS---SCLLELLVHRGVGLDLF 196 (433)
Q Consensus 133 GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~---~~~v~L~V~R~~~~~~~ 196 (433)
|++|..|.++|||++ ||++||+|++|||+++.+. .++...++. ++.+.|+|.|++....+
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~---~~l~~~l~~~~~g~~v~l~v~R~g~~~~~ 64 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSA---EKLIDYISSKKAGDKVTLKIEREEKEKRV 64 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSH---HHHHHHHSSCCSSCEECEEEESSSCEECC
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCH---HHHHHHHHcCCCCCEEEEEEEECCEEEEE
Confidence 678899999999999 9999999999999999844 455555543 47899999999865443
No 353
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.58 E-value=9.8e-08 Score=76.72 Aligned_cols=56 Identities=27% Similarity=0.533 Sum_probs=47.2
Q ss_pred CeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc--CCcEEEEEEEEcC
Q psy12296 19 GVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH--SQNIISLKVRSVG 76 (433)
Q Consensus 19 Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~--~g~~V~L~V~R~g 76 (433)
.++|..|.++|+|+++||+.||+|++|||+.+.++ .++...+. .+..+.|+|.|++
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~g 62 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQW--VTFVMLVRDNPGXSLALEIERQG 62 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCH--HHHHHHHHHCTTCCEEEEEEETT
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCH--HHHHHHHhcCCCCeEEEEEEECC
Confidence 46788999999999999999999999999999987 44555554 3778999999977
No 354
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.58 E-value=1.7e-07 Score=95.31 Aligned_cols=73 Identities=21% Similarity=0.369 Sum_probs=62.2
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEEEEEcC
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLKVRSVG 76 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~V~R~g 76 (433)
.|+|+.+........+++|..|.++|||+++||++||+|++|||+++.+++..++..+++. |..|+|+|.|.+
T Consensus 85 ~giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g 159 (388)
T 1fc6_A 85 TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPG 159 (388)
T ss_dssp BBCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETT
T ss_pred EEEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 3788988752122468999999999999999999999999999999999887788888863 788999999976
No 355
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.58 E-value=3e-08 Score=93.50 Aligned_cols=84 Identities=24% Similarity=0.330 Sum_probs=66.5
Q ss_pred cceEEeeCCCCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcC-CCeE-EE
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKS-SCLL-EL 185 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~-~~~v-~L 185 (433)
..+.|.+.. .+|||.+.++.. ..|++|..|.++++|+++||++||+|++|||+.+. ..++.+++..++. +..+ .|
T Consensus 11 r~v~l~k~~-~glG~~l~~~~~-~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~-~~s~~dl~~~l~~~g~~v~~l 87 (216)
T 2krg_A 11 RLCTMKKGP-SGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCME-GKQHGDVVSAIRAGGDETKLL 87 (216)
T ss_dssp EEEEEECCS-SSSCEEECCCSS-SCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECT-TCCTHHHHHHHHHHCSEEEEE
T ss_pred EEEEEEeCC-CCceEEEEecCC-CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECC-CCCHHHHHHHHHhcCCeEEEE
Confidence 345555543 579999876442 45899999999999999999999999999999998 6777777777665 4678 88
Q ss_pred EEEECCeee
Q psy12296 186 LVHRGVGLD 194 (433)
Q Consensus 186 ~V~R~~~~~ 194 (433)
+|.|++...
T Consensus 88 ~V~R~g~~~ 96 (216)
T 2krg_A 88 VVDRETDEF 96 (216)
T ss_dssp ECCHHHHHH
T ss_pred EEEECCEEE
Confidence 888887543
No 356
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.53 E-value=1.9e-07 Score=100.28 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=55.4
Q ss_pred eEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcC
Q psy12296 5 TLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVG 76 (433)
Q Consensus 5 gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g 76 (433)
+||+.+... ..|++|..|.++|||+++||++||+|++|||+.|......+++...+.|+.|+|+|.|++
T Consensus 486 ~lG~~~~~~---~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~~~~l~~~l~~~~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 486 NFGAKYKAS---PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQATEQSVKRILERYIPGDTVTIHAFRRD 554 (597)
T ss_dssp CCSEEEEEE---TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCTTTHHHHHTTCCTTCEEEEEEEETT
T ss_pred ccceEEecc---CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 688887642 358999999999999999999999999999999953333334433345899999999987
No 357
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.51 E-value=2.5e-07 Score=74.36 Aligned_cols=65 Identities=23% Similarity=0.220 Sum_probs=51.6
Q ss_pred ceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeecC
Q psy12296 133 GIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFPG 198 (433)
Q Consensus 133 GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~~ 198 (433)
.++|..|.++++|+++||++||+|++|||+++.+..++..++... .++.+.|+|.|++....+..
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~-~g~~v~l~v~R~g~~~~~~v 69 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVRDN-PGXSLALEIERQGSPLSLTL 69 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHHHC-TTCCEEEEEEETTEEEEEEE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHhcC-CCCeEEEEEEECCeEEEEEE
Confidence 356889999999999999999999999999999665555555542 35789999999987655543
No 358
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.48 E-value=2.5e-07 Score=92.75 Aligned_cols=70 Identities=23% Similarity=0.446 Sum_probs=56.4
Q ss_pred eEeEEEEecCC----CCCCeEEEEeCCCCHhHhCCCCC-----------CCEEEEECCEecCCCCHHHHHHHhc---CCc
Q psy12296 5 TLGFSIRGGRE----HTTGVFVSNVEPKSEAERSGLLI-----------GDQIIRINGFPIEDATHSEVLQLIH---SQN 66 (433)
Q Consensus 5 gLGfsI~gG~~----~~~Gv~Vs~V~pgSpA~~aGL~~-----------GD~ILaVNG~~V~~~s~~eav~lL~---~g~ 66 (433)
.||+.+..... ...|++|..|.++|||++|||++ ||+|++|||++|.++ .++...+. .|+
T Consensus 234 ~lGi~~~~~~~~~~~~~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~ 311 (348)
T 3qo6_A 234 ILGIKFAPDQSVEQLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGD 311 (348)
T ss_dssp ECCCEECCTTTTTTTTCSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTC
T ss_pred ecCcEEccchhhhhcCCceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcC
Confidence 46776653111 02699999999999999999999 999999999999998 45666663 378
Q ss_pred EEEEEEEEcC
Q psy12296 67 IISLKVRSVG 76 (433)
Q Consensus 67 ~V~L~V~R~g 76 (433)
.|+|+|.|++
T Consensus 312 ~v~l~v~R~g 321 (348)
T 3qo6_A 312 EVTVEVLRGD 321 (348)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEECC
Confidence 9999999987
No 359
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.45 E-value=5e-07 Score=90.71 Aligned_cols=67 Identities=19% Similarity=0.202 Sum_probs=58.1
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeec
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFP 197 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~ 197 (433)
..|++|..|.++|||+++||++||+|++|||+++.+..++.+++...+.++.+.|+|.|+++...+.
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 328 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVE 328 (345)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEEEETTEEEEEE
T ss_pred CceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 4799999999999999999999999999999999977777777766556689999999999875543
No 360
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.45 E-value=4.4e-07 Score=90.17 Aligned_cols=58 Identities=28% Similarity=0.444 Sum_probs=52.7
Q ss_pred CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcC
Q psy12296 17 TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVG 76 (433)
Q Consensus 17 ~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g 76 (433)
..|++|..|.++|||+++||++||+|++|||+++.++ .++...++.++.|.|+|.|++
T Consensus 255 ~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~--~~l~~~l~~~~~v~l~v~R~g 312 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA--EDVYEAVRTQSQLAVQIRRGR 312 (325)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHTTCSSEEEEEEETT
T ss_pred CCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCH--HHHHHHHhCCCeEEEEEEECC
Confidence 3699999999999999999999999999999999986 567777877888999999987
No 361
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.40 E-value=5.2e-07 Score=84.06 Aligned_cols=64 Identities=17% Similarity=0.149 Sum_probs=53.3
Q ss_pred CCCCceEEEEECCCChhhhcCCCCC-CEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCe
Q psy12296 129 QWKPGIFVQFTKDACVAKDAGLKCG-DQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVG 192 (433)
Q Consensus 129 ~~~~GV~V~~V~~gspA~~aGL~~G-D~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~ 192 (433)
....|++|..|.++|||+++||++| |+|++|||+++.+..++...+.....+..+.|+|.|++.
T Consensus 13 ~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 77 (209)
T 3rle_A 13 GGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKT 77 (209)
T ss_dssp SSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTT
T ss_pred CCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCC
Confidence 3456899999999999999999999 999999999999666666555544556889999999753
No 362
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.40 E-value=2.3e-07 Score=94.55 Aligned_cols=84 Identities=19% Similarity=0.250 Sum_probs=67.7
Q ss_pred cceEEeeCCCCCCCceeecCCC--CCCceEEEEECCCChhhhcC-CCCCCEEEEEccEecCChhhHHHHHHHhcCC---C
Q psy12296 108 VPITLEVPPHGKLGCGICKGPQ--WKPGIFVQFTKDACVAKDAG-LKCGDQILACNGVKFSPDVTFEHAVSVMKSS---C 181 (433)
Q Consensus 108 ~~v~L~~~~~~~LG~~l~gg~~--~~~GV~V~~V~~gspA~~aG-L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~---~ 181 (433)
..+.+.+.....||+.+.+... ...|++|..|.++|||+++| |++||+|++|||+++. ..++.+++.+++.. .
T Consensus 206 ~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~-~~~~~~~~~~l~~~~~~~ 284 (388)
T 3suz_A 206 KELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLV-GLPLATCQGIIKGLKNQT 284 (388)
T ss_dssp EEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECS-SCCSTTHHHHTTTCTTCS
T ss_pred eEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEcc-CCCHHHHHHHHHhccCCC
Confidence 4566777667789999876431 12468999999999999999 9999999999999999 77778888887764 5
Q ss_pred eEEEEEEECCe
Q psy12296 182 LLELLVHRGVG 192 (433)
Q Consensus 182 ~v~L~V~R~~~ 192 (433)
.+.|+|.|++.
T Consensus 285 ~v~l~v~r~~~ 295 (388)
T 3suz_A 285 QVKLNIVSCPP 295 (388)
T ss_dssp CEEEEEEECCS
T ss_pred ccccccccccc
Confidence 69999999754
No 363
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.40 E-value=3.7e-07 Score=93.62 Aligned_cols=71 Identities=24% Similarity=0.290 Sum_probs=57.2
Q ss_pred CCeEeEEEEecCCCCC--CeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc-CCcEEEEEEEEcC
Q psy12296 3 NGTLGFSIRGGREHTT--GVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH-SQNIISLKVRSVG 76 (433)
Q Consensus 3 ~~gLGfsI~gG~~~~~--Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~-~g~~V~L~V~R~g 76 (433)
.-|+||++....+... .++|..|.++|||++|||++||+|++|||++|.++. +..+++ .|..|+|+|.|.+
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g 146 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEV 146 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEE
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCC
Confidence 4578888886433222 478999999999999999999999999999999985 444454 3788999999876
No 364
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.35 E-value=8.7e-07 Score=87.63 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=56.0
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeec
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFP 197 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~ 197 (433)
..|++|..|.+++||+++||++||+|++|||+++.+..++.+++...+.++.+.|+|.|+++...+.
T Consensus 243 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 309 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQ 309 (318)
T ss_dssp CCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESSSCEEEEE
T ss_pred CCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 4689999999999999999999999999999999966666666554445589999999998765443
No 365
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.35 E-value=1.3e-06 Score=86.54 Aligned_cols=78 Identities=14% Similarity=0.117 Sum_probs=60.7
Q ss_pred CCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEE-CCeeeee
Q psy12296 118 GKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHR-GVGLDLF 196 (433)
Q Consensus 118 ~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R-~~~~~~~ 196 (433)
..||+.+... ....|++|..|.+++||+++||++||+|++|||+++.+..++..++...+.++.+.|+|.| +++...+
T Consensus 229 ~~lGi~~~~~-~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g~~~~~ 307 (324)
T 1y8t_A 229 ASLGVQVTND-KDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTV 307 (324)
T ss_dssp EECCEEEESC-SSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECSSCCEEEE
T ss_pred cccceEeeec-cCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCCCEEEE
Confidence 4567766431 2256899999999999999999999999999999999666666666544456899999999 8765433
No 366
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.34 E-value=1.4e-06 Score=86.44 Aligned_cols=65 Identities=22% Similarity=0.251 Sum_probs=55.4
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeecC
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFPG 198 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~~ 198 (433)
..|++|..|.+++||+++||++||+|++|||+++. ++.+..+.++..+.+.|+|.|+++...+..
T Consensus 255 ~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~---~~~~l~~~l~~~~~v~l~v~R~g~~~~~~v 319 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQ---NAEDVYEAVRTQSQLAVQIRRGRETLTLYV 319 (325)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECC---SHHHHHHHHTTCSSEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcC---CHHHHHHHHhCCCeEEEEEEECCEEEEEEE
Confidence 46999999999999999999999999999999999 455555666667899999999998765543
No 367
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.34 E-value=8.3e-07 Score=76.45 Aligned_cols=60 Identities=17% Similarity=0.157 Sum_probs=49.9
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCe
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVG 192 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~ 192 (433)
..|++|..|.+++||+++ |++||+|++|||+++.+..++..++...+.++.+.|+| |++.
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 468999999999999999 99999999999999996555555554434457899999 9886
No 368
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.34 E-value=6.3e-07 Score=77.20 Aligned_cols=56 Identities=29% Similarity=0.413 Sum_probs=48.1
Q ss_pred CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhc---CCcEEEEEEEEcC
Q psy12296 17 TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIH---SQNIISLKVRSVG 76 (433)
Q Consensus 17 ~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~---~g~~V~L~V~R~g 76 (433)
..|++|..|.++|||+++ |++||+|++|||+++.++. ++...+. .++.|.|+| |++
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~--dl~~~l~~~~~g~~v~l~V-R~g 82 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLT--TYSAALKTISVGEVINITT-DQG 82 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHH--HHHHHHTTCCTTCEEEEEE-TTE
T ss_pred CCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEE-ECC
Confidence 468999999999999999 9999999999999999874 4555554 378899999 876
No 369
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.30 E-value=1.1e-06 Score=94.30 Aligned_cols=78 Identities=17% Similarity=0.136 Sum_probs=65.4
Q ss_pred CCCCCceeecCCCCCCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeee
Q psy12296 117 HGKLGCGICKGPQWKPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLF 196 (433)
Q Consensus 117 ~~~LG~~l~gg~~~~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~ 196 (433)
...+|+.+.. ...|++|..|.++|||+++||++||+|++|||+.+. ..++.+++...+.++.|.|+|.|+++...+
T Consensus 484 ~~~lG~~~~~---~~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~-~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~ 559 (597)
T 4fgm_A 484 RVNFGAKYKA---SPQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQAT-EQSVKRILERYIPGDTVTIHAFRRDELMTL 559 (597)
T ss_dssp SCCCSEEEEE---ETTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECC-TTTHHHHHTTCCTTCEEEEEEEETTEEEEE
T ss_pred ccccceEEec---cCCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECC-HHHHHHHHHhcCCCCEEEEEEEECCEEEEE
Confidence 3467777643 134899999999999999999999999999999996 889998888766678999999999987655
Q ss_pred cC
Q psy12296 197 PG 198 (433)
Q Consensus 197 ~~ 198 (433)
..
T Consensus 560 ~v 561 (597)
T 4fgm_A 560 EL 561 (597)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 370
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.25 E-value=3e-06 Score=88.00 Aligned_cols=66 Identities=23% Similarity=0.325 Sum_probs=57.7
Q ss_pred CceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeec
Q psy12296 132 PGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFP 197 (433)
Q Consensus 132 ~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~ 197 (433)
.|++|..|.++|||+++||++||+|++|||+++.+..++..++...+.++.+.|+|.|+++...+.
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~ 347 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLS 347 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEE
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 699999999999999999999999999999999977777777766566689999999999875543
No 371
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.25 E-value=2.9e-06 Score=87.65 Aligned_cols=67 Identities=19% Similarity=0.202 Sum_probs=57.5
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeec
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFP 197 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~ 197 (433)
..|++|..|.++|||+++||++||+|++|||+++.+..++..++.....++.+.|+|.|++....+.
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 328 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVE 328 (436)
T ss_pred CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 4689999999999999999999999999999999977677666665555689999999998775554
No 372
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.24 E-value=1.2e-06 Score=98.86 Aligned_cols=153 Identities=10% Similarity=0.002 Sum_probs=99.7
Q ss_pred CCCceeecCCCCCCceEEEEECCC--------ChhhhcC--CCCCCEEEEEccEecCChhhHHHHHHHhcCC--CeEEEE
Q psy12296 119 KLGCGICKGPQWKPGIFVQFTKDA--------CVAKDAG--LKCGDQILACNGVKFSPDVTFEHAVSVMKSS--CLLELL 186 (433)
Q Consensus 119 ~LG~~l~gg~~~~~GV~V~~V~~g--------spA~~aG--L~~GD~Il~ING~~v~s~~s~~eav~~Lr~~--~~v~L~ 186 (433)
.+|+.+.. ...+++|..|.++ +||+++| |+ ||+|++|||+++.+.. +++..++.. ..+.|+
T Consensus 738 g~G~~~~~---~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~---~~~~~~~~~~g~~v~l~ 810 (1045)
T 1k32_A 738 RIACDFKL---DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS---NIYRVLSEKAGTSARIR 810 (1045)
T ss_dssp BCSEEEEE---ETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB---CHHHHHHTTTTSEEEEE
T ss_pred eecEEEEE---eCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh---hHHHhhcCCCCCEEEEE
Confidence 55665532 2357899999988 9999999 99 9999999999998333 556666653 799999
Q ss_pred EEECCe-eeeecCCCCCCCCCCCCCCCCCCCCCc----c----------ccccceeeEEeeecCCCCC------------
Q psy12296 187 VHRGVG-LDLFPGGSSGYNSSTSSLNGDNQDEPT----L----------VQFKRLSVVKEESVGNGRS------------ 239 (433)
Q Consensus 187 V~R~~~-~~~~~~~~~~~~~s~ss~~~~~~~sP~----~----------~~~~r~~~l~~~sf~~~~~------------ 239 (433)
|.|++. ...+... ... +. .+. | ...+++.|+++.+|..+..
T Consensus 811 v~r~~~~~~~~~~~---------~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~igyi~~~~f~~~~~~~~~~~~~~~~~ 878 (1045)
T 1k32_A 811 LSGKGGDKRDLMID---------ILD-DD--RFIRYRSWVEANRRYVHERSKGTIGYIHIPDMGMMGLNEFYRLFINESS 878 (1045)
T ss_dssp EECSSSCEEEEEEE---------CBS-CC--HHHHHHHHHHHHHHHHHHHTTTSEEEEECCCBSHHHHHHHHHHHHHHTT
T ss_pred EECCCCceEEEEEE---------Ecc-cc--cchhhhhhhhhcceeEEEecCCCEEEEEECccCchHHHHHHHHHHHhCC
Confidence 999863 2112110 000 00 110 1 1136789999999966221
Q ss_pred -----------------cchhHHhhh--------c------------CCceeecCCCCCCchhHHHhHHhhh-ccccccC
Q psy12296 240 -----------------NSLEDVTQA--------R------------AEPRTLHNGGGGASLSSAISEEIKR-RSERLNS 281 (433)
Q Consensus 240 -----------------~~l~~~~~~--------~------------~~~~~l~~~ggg~s~s~~v~~~l~~-~~~~~~~ 281 (433)
..+...+.. + ....+++.|++.+|+|++++.+|++ .+.++++
T Consensus 879 ~~~liiDlR~N~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vL~~~~taSa~e~~~~~l~~~~~~~~vG 958 (1045)
T 1k32_A 879 YQGLIVDVRFNGGGFVSQLIIEKLMNKRIGYDNPRRGTLSPYPTNSVRGKIIAITNEYAGSDGDIFSFSFKKLGLGKLIG 958 (1045)
T ss_dssp SSEEEEECTTCCCBSCHHHHHHHHTCBCCEEEEESSSCCEEESTTCBCSEEEEEECTTCCTHHHHHHHHHHHTTSEEEEE
T ss_pred CCEEEEEcCcCCCCCHHHHHHhhccCCcEEEEecCCCceeeccccCCCCCEEEEECCCCccHHHHHHHHHhhcCCEEEEc
Confidence 111111100 0 0123777888999999999999998 6788888
Q ss_pred CCcccccccc
Q psy12296 282 GKEFVKVETT 291 (433)
Q Consensus 282 ~~~f~~~~~~ 291 (433)
+.+|+ +.++
T Consensus 959 ~~t~G-g~~~ 967 (1045)
T 1k32_A 959 TRTWG-GVVG 967 (1045)
T ss_dssp SCCCC-CCEE
T ss_pred cCCCC-Cccc
Confidence 88888 6554
No 373
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.15 E-value=2.7e-07 Score=91.90 Aligned_cols=58 Identities=31% Similarity=0.503 Sum_probs=0.0
Q ss_pred CCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCCCHHHHHHHhcCCcEEEEEEEEcC
Q psy12296 17 TTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDATHSEVLQLIHSQNIISLKVRSVG 76 (433)
Q Consensus 17 ~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~s~~eav~lL~~g~~V~L~V~R~g 76 (433)
..|++|..|.++|||+++||++||+|++|||+++.++. ++...++.++.|+|+|.|++
T Consensus 253 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~--~~~~~l~~~~~v~l~v~R~g 310 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSAN--DVSDVIKRESTLNMVVRRGN 310 (332)
T ss_dssp ------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHH--HHHHHHhCCCeEEEEEEECC
Confidence 46899999999999999999999999999999998774 46666666788999999987
No 374
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.15 E-value=2.3e-06 Score=85.70 Aligned_cols=66 Identities=26% Similarity=0.276 Sum_probs=55.3
Q ss_pred CceEEEEECCCChhhhcCCCC-----------CCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeec
Q psy12296 132 PGIFVQFTKDACVAKDAGLKC-----------GDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFP 197 (433)
Q Consensus 132 ~GV~V~~V~~gspA~~aGL~~-----------GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~ 197 (433)
.|++|..|.+++||+++||++ ||+|++|||+++.+..++.+++...+.++.+.|+|.|+++...+.
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~ 327 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKIS 327 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSSEEEEE
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCEEEEEE
Confidence 699999999999999999999 999999999999966666665554444589999999998765443
No 375
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.94 E-value=1.2e-06 Score=87.15 Aligned_cols=63 Identities=24% Similarity=0.319 Sum_probs=0.0
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeee
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLF 196 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~ 196 (433)
..|++|..|.+++||+++||++||+|++|||+++. ++.++...++.+..+.|+|.|+++...+
T Consensus 253 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~---~~~~~~~~l~~~~~v~l~v~R~g~~~~~ 315 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVV---SANDVSDVIKRESTLNMVVRRGNEDIMI 315 (332)
T ss_dssp ------------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcCCCCCCEEEEECCEECC---CHHHHHHHHhCCCeEEEEEEECCEEEEE
Confidence 46899999999999999999999999999999998 4455555555567899999999865433
No 376
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.78 E-value=6.5e-06 Score=85.38 Aligned_cols=67 Identities=27% Similarity=0.251 Sum_probs=53.9
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChhhHHHHHHHhcCCCeEEEEEEECCeeeeec
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDVTFEHAVSVMKSSCLLELLVHRGVGLDLFP 197 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~s~~eav~~Lr~~~~v~L~V~R~~~~~~~~ 197 (433)
..|++|..|.+++||+++||++||+|++|||+.+.+..++..++...+.++.+.|+|.|++....+.
T Consensus 285 ~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 351 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVN 351 (448)
T ss_dssp CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESSSCEEECC
T ss_pred CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 3699999999999999999999999999999999955555444443334588999999998665443
No 377
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.70 E-value=0.00016 Score=76.67 Aligned_cols=67 Identities=18% Similarity=0.188 Sum_probs=56.1
Q ss_pred CCceEEEEECCCChhhhcCCCCCCEEEEEccEecCChh----------hHHHHHHHhcCCCeEEEEEEECCeeeeecC
Q psy12296 131 KPGIFVQFTKDACVAKDAGLKCGDQILACNGVKFSPDV----------TFEHAVSVMKSSCLLELLVHRGVGLDLFPG 198 (433)
Q Consensus 131 ~~GV~V~~V~~gspA~~aGL~~GD~Il~ING~~v~s~~----------s~~eav~~Lr~~~~v~L~V~R~~~~~~~~~ 198 (433)
..|++|..|.++|||+++ |++||+|++|||+.+.+.. .+..++...+.++.+.|+|.|+++...+..
T Consensus 276 ~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~V 352 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQV 352 (539)
T ss_dssp SBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEE
T ss_pred cCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEE
Confidence 469999999999999876 9999999999999996432 266777777777999999999998765543
No 378
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.62 E-value=6.6e-05 Score=84.53 Aligned_cols=67 Identities=13% Similarity=0.219 Sum_probs=56.2
Q ss_pred CeEeEEEEecCCCCCCeEEEEeCCC--------CHhHhCC--CCCCCEEEEECCEecCCCCHHHHHHHhcC--CcEEEEE
Q psy12296 4 GTLGFSIRGGREHTTGVFVSNVEPK--------SEAERSG--LLIGDQIIRINGFPIEDATHSEVLQLIHS--QNIISLK 71 (433)
Q Consensus 4 ~gLGfsI~gG~~~~~Gv~Vs~V~pg--------SpA~~aG--L~~GD~ILaVNG~~V~~~s~~eav~lL~~--g~~V~L~ 71 (433)
+++|+.+.- . ..+++|..|.++ |||+++| |+ ||+|++|||+++.++. ++..+++. |..|+|+
T Consensus 737 ~g~G~~~~~--~-~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~ 810 (1045)
T 1k32_A 737 GRIACDFKL--D-GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIR 810 (1045)
T ss_dssp CBCSEEEEE--E-TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEE
T ss_pred ceecEEEEE--e-CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEE
Confidence 478888874 2 368999999998 9999999 99 9999999999999975 45666653 7899999
Q ss_pred EEEcC
Q psy12296 72 VRSVG 76 (433)
Q Consensus 72 V~R~g 76 (433)
|.|.+
T Consensus 811 v~r~~ 815 (1045)
T 1k32_A 811 LSGKG 815 (1045)
T ss_dssp EECSS
T ss_pred EECCC
Confidence 99865
No 379
>1j7x_A IRBP, interphotoreceptor retinoid-binding protein; beta BETA alpha spiral, transport protein; 1.80A {Xenopus laevis} SCOP: c.14.1.2
Probab=70.99 E-value=1.9 Score=41.72 Aligned_cols=40 Identities=3% Similarity=-0.091 Sum_probs=35.8
Q ss_pred ceeecCCCCCCchhHHHhHHhhh-ccccccCCCcccccccc
Q psy12296 252 PRTLHNGGGGASLSSAISEEIKR-RSERLNSGKEFVKVETT 291 (433)
Q Consensus 252 ~~~l~~~ggg~s~s~~v~~~l~~-~~~~~~~~~~f~~~~~~ 291 (433)
..+++.|++.+|+|++++..|++ ++..++++.+|+++..+
T Consensus 204 pvvVLvn~~TaSAsE~~a~alq~~~~a~vVG~~T~Gk~~~~ 244 (302)
T 1j7x_A 204 GVYVLTSHQTATAAEEFAYLMQSLSRATIIGEITSGNLMHS 244 (302)
T ss_dssp EEEEEECTTCCTHHHHHHHHHHHTTCCEEEESCCCCCCSCE
T ss_pred CEEEEeCCCcCcHHHHHHHHHHhCCCEEEEcccCCCCCCCc
Confidence 35788999999999999999999 68899999999999654
No 380
>3m1f_V VOPL, putative uncharacterized protein VPA1370; actin, actin-binding protein, crosslinking, nucleator, prote protein interaction; HET: HIC ATP; 2.89A {Oryctolagus cuniculus}
Probab=61.40 E-value=3.5 Score=25.90 Aligned_cols=14 Identities=14% Similarity=0.394 Sum_probs=11.5
Q ss_pred hHHHHHHHHHHHHH
Q psy12296 302 HLKLQTLMKEVKEA 315 (433)
Q Consensus 302 ~~~~~~~~~~~~~~ 315 (433)
.++++|||.|||.-
T Consensus 3 nedrSKLMEqIRqG 16 (31)
T 3m1f_V 3 NEDHSKLMEQIRQG 16 (31)
T ss_dssp STTHHHHHHHHHHC
T ss_pred chhHHHHHHHHHhh
Confidence 46799999999863
No 381
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=55.67 E-value=4.9 Score=42.61 Aligned_cols=38 Identities=5% Similarity=-0.160 Sum_probs=34.2
Q ss_pred eeecCCCCCCchhHHHhHHhhh-ccccccCCCccccccc
Q psy12296 253 RTLHNGGGGASLSSAISEEIKR-RSERLNSGKEFVKVET 290 (433)
Q Consensus 253 ~~l~~~ggg~s~s~~v~~~l~~-~~~~~~~~~~f~~~~~ 290 (433)
.+++.|++++|+|+++++.|++ .+.+++++.+|+++.+
T Consensus 457 vvVLVN~~SASASEifA~aLKd~~ra~lVGe~T~Gkg~v 495 (583)
T 3dor_A 457 ICVLINEQDFSCADFFPVVLKDNDRALIVGTRTAGAGGF 495 (583)
T ss_dssp EEEEECTTBCTHHHHHHHHHHHTTCEEEEESCCCCCCSC
T ss_pred EEEEECCCCccHHHHHHHHHHhCCCEEEEeeCCCCCCce
Confidence 3788999999999999999999 6889999999999954
No 382
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=40.71 E-value=26 Score=37.15 Aligned_cols=43 Identities=16% Similarity=0.519 Sum_probs=28.0
Q ss_pred eEeEEEEecCCCCCCeEEEEeCCCCHhHhCCCCCCCEEEEECCEecCCC
Q psy12296 5 TLGFSIRGGREHTTGVFVSNVEPKSEAERSGLLIGDQIIRINGFPIEDA 53 (433)
Q Consensus 5 gLGfsI~gG~~~~~Gv~Vs~V~pgSpA~~aGL~~GD~ILaVNG~~V~~~ 53 (433)
.+||.+.--.+ .-++|..+..... ++..||+|++|||+++..+
T Consensus 85 ~~Pf~vki~iD--G~i~V~dv~~~~s----~I~vGdEIlsING~pv~e~ 127 (583)
T 3dor_A 85 YLPYTVQKSSD--GRFYFVDIMTFSS----EIRVGDELLEVDGAPVQDV 127 (583)
T ss_dssp ECSEEEEECTT--SCEEEEEECSSCC----SSCTTCEEEEETTEEHHHH
T ss_pred cCCeEEEEEEC--CcEEEEecccccc----CCCCCCEEEEECCccHHHH
Confidence 45665551133 2377766633221 6999999999999998763
No 383
>4gdk_C APG16-like 1, autophagy-related protein 16-1; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_C
Probab=28.78 E-value=15 Score=24.32 Aligned_cols=31 Identities=13% Similarity=0.043 Sum_probs=25.4
Q ss_pred cccccccccccchHHHHHHHHHHHHHHhccC
Q psy12296 290 TTKNNIEEDSSYHLKLQTLMKEVKEAHNKMF 320 (433)
Q Consensus 290 ~~r~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (433)
-+|+-+++.+.-|+-...+|+||-..|||.|
T Consensus 6 Wrr~I~~~Lr~RdR~q~~~F~diI~~yNkLl 36 (36)
T 4gdk_C 6 WKRHISEQLRRRDRLQRQAFEEIILQYNKLL 36 (36)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhcccC
Confidence 4566667777778888899999999999986
No 384
>1j98_A Autoinducer-2 production protein LUXS; autoinducer synthesis, signaling protein; 1.20A {Bacillus subtilis} SCOP: d.185.1.2 PDB: 1jqw_A 1jvi_A* 1ie0_A 2fqo_A* 2fqt_A* 1ycl_A*
Probab=23.08 E-value=26 Score=30.76 Aligned_cols=23 Identities=26% Similarity=0.218 Sum_probs=18.2
Q ss_pred eecccccccCcCCCCCCCcccCC
Q psy12296 358 MASFKSFSAAPAPAKPPPVYFPP 380 (433)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~ 380 (433)
|+.||||.+.-+..|||-||+.-
T Consensus 1 M~~i~SF~lDHtkv~ap~VR~~~ 23 (157)
T 1j98_A 1 MPSVESFELDHNAVVAPYVRHCG 23 (157)
T ss_dssp ---CGGGGSCTTTCCSSEEEEEE
T ss_pred CCcCceEeccchhcCCCeEEEEE
Confidence 78999999999999999998843
No 385
>1j6x_A Autoinducer-2 production protein LUXS; alpha-beta fold, signaling protein; 2.38A {Helicobacter pylori} SCOP: d.185.1.2
Probab=21.67 E-value=29 Score=30.51 Aligned_cols=22 Identities=27% Similarity=0.351 Sum_probs=19.7
Q ss_pred eecccccccCcCCCCCCCcccCC
Q psy12296 358 MASFKSFSAAPAPAKPPPVYFPP 380 (433)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~ 380 (433)
|+ ||||.|.-+..|||-||+.-
T Consensus 3 M~-i~SF~lDHtkv~ap~VR~~~ 24 (160)
T 1j6x_A 3 MN-VESFNLDHTKVKAPYVRIAD 24 (160)
T ss_dssp CS-SGGGGSCTTSCCSSEEEEEE
T ss_pred CC-CceEeccccccCCCeEEEEE
Confidence 78 99999999999999988843
No 386
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=20.05 E-value=26 Score=26.08 Aligned_cols=15 Identities=20% Similarity=0.417 Sum_probs=12.3
Q ss_pred HHHHHHHHhccCCCC
Q psy12296 309 MKEVKEAHNKMFPGS 323 (433)
Q Consensus 309 ~~~~~~~~~~~~~~~ 323 (433)
.+|||++|+++|..-
T Consensus 21 ~~~Ik~~yr~Lm~~n 35 (65)
T 2guz_B 21 MDKINNRFNYLFEVN 35 (65)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 389999999999643
Done!