Query psy12301
Match_columns 632
No_of_seqs 448 out of 2637
Neff 8.8
Searched_HMMs 46136
Date Fri Aug 16 15:30:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12301.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12301hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3867|consensus 100.0 4.6E-68 1E-72 558.3 30.2 480 77-630 26-525 (528)
2 TIGR03417 chol_sulfatase choli 100.0 2.6E-67 5.7E-72 576.1 31.2 389 80-604 2-444 (500)
3 PRK13759 arylsulfatase; Provis 100.0 1.4E-65 3.1E-70 560.3 33.1 398 79-606 5-462 (485)
4 COG3119 AslA Arylsulfatase A a 100.0 3.3E-55 7.1E-60 476.6 29.8 374 80-486 4-420 (475)
5 PF00884 Sulfatase: Sulfatase; 100.0 5E-44 1.1E-48 370.4 16.5 299 81-413 1-308 (308)
6 KOG3731|consensus 100.0 8.6E-43 1.9E-47 347.9 20.3 314 81-457 35-387 (541)
7 PRK03776 phosphoglycerol trans 100.0 2.3E-36 4.9E-41 331.0 25.0 308 75-454 156-469 (762)
8 PRK12363 phosphoglycerol trans 100.0 7.7E-36 1.7E-40 327.1 24.5 290 77-417 153-448 (703)
9 PRK09598 lipid A phosphoethano 100.0 9.9E-34 2.2E-38 307.2 21.6 270 78-416 221-506 (522)
10 PRK10649 hypothetical protein; 100.0 4.6E-33 1E-37 306.8 19.2 276 80-418 236-535 (577)
11 COG3083 Predicted hydrolase of 100.0 2.6E-29 5.6E-34 255.8 25.8 304 78-486 257-562 (600)
12 PRK11598 putative metal depend 100.0 5E-30 1.1E-34 278.9 20.2 272 80-418 233-531 (545)
13 PRK11560 phosphoethanolamine t 100.0 1.2E-28 2.7E-33 267.8 22.2 270 79-417 246-542 (558)
14 COG1368 MdoB Phosphoglycerol t 99.9 1.9E-23 4.2E-28 235.5 16.4 288 78-415 259-554 (650)
15 COG2194 Predicted membrane-ass 99.8 1.2E-19 2.7E-24 196.6 15.3 275 79-416 230-530 (555)
16 PRK05362 phosphopentomutase; P 99.8 9.1E-18 2E-22 174.5 19.0 178 156-452 216-393 (394)
17 cd00016 alkPPc Alkaline phosph 99.7 5.2E-17 1.1E-21 170.5 18.4 301 80-413 6-384 (384)
18 TIGR01307 pgm_bpd_ind 2,3-bisp 99.7 8.9E-16 1.9E-20 163.4 18.7 133 244-418 362-494 (501)
19 PRK12383 putative mutase; Prov 99.7 4.2E-15 9E-20 154.6 18.5 177 157-455 228-404 (406)
20 TIGR01696 deoB phosphopentomut 99.6 1.8E-14 3.9E-19 148.4 17.7 168 156-416 209-376 (381)
21 TIGR02335 hydr_PhnA phosphonoa 99.6 5.7E-15 1.2E-19 156.9 13.2 108 73-182 5-121 (408)
22 PRK05434 phosphoglyceromutase; 99.6 5.2E-14 1.1E-18 151.2 17.8 129 247-418 371-499 (507)
23 PF01663 Phosphodiest: Type I 99.6 2.5E-16 5.5E-21 167.2 -0.3 230 83-346 1-247 (365)
24 PF02995 DUF229: Protein of un 99.5 5.9E-13 1.3E-17 145.3 14.8 275 77-417 123-410 (497)
25 TIGR03397 acid_phos_Burk acid 99.4 7.2E-12 1.6E-16 132.7 20.3 89 311-415 365-454 (483)
26 KOG2645|consensus 99.4 4.1E-12 9E-17 132.6 15.9 202 78-346 20-238 (418)
27 COG1015 DeoB Phosphopentomutas 99.3 1.1E-10 2.3E-15 116.7 16.7 167 157-416 220-386 (397)
28 PF01676 Metalloenzyme: Metall 99.3 3.4E-12 7.4E-17 127.7 4.7 125 246-417 123-247 (252)
29 PLN02538 2,3-bisphosphoglycera 99.2 5.9E-10 1.3E-14 119.4 17.9 144 242-418 399-550 (558)
30 COG1524 Uncharacterized protei 99.1 2E-10 4.4E-15 125.3 11.6 74 77-153 35-110 (450)
31 KOG2126|consensus 99.1 7.1E-10 1.5E-14 121.9 11.7 248 83-418 61-322 (895)
32 KOG2125|consensus 99.0 3.1E-10 6.8E-15 121.4 6.6 257 79-418 49-311 (760)
33 KOG4513|consensus 98.9 2.6E-08 5.7E-13 99.1 14.4 133 247-418 388-523 (531)
34 PRK10518 alkaline phosphatase; 98.8 6.9E-08 1.5E-12 102.9 15.8 137 249-414 327-476 (476)
35 KOG2124|consensus 98.8 6.6E-08 1.4E-12 106.5 14.0 253 82-417 45-327 (883)
36 COG3379 Uncharacterized conser 98.8 1.4E-08 3E-13 102.5 7.0 99 81-182 4-110 (471)
37 PF14707 Sulfatase_C: C-termin 98.7 8.7E-09 1.9E-13 92.1 4.8 56 568-631 59-119 (131)
38 COG0696 GpmI Phosphoglyceromut 98.7 2.2E-07 4.8E-12 96.6 13.3 131 244-418 369-500 (509)
39 smart00098 alkPPc Alkaline pho 98.6 4.6E-07 1E-11 95.9 14.4 76 248-346 236-311 (419)
40 PF04185 Phosphoesterase: Phos 98.5 2E-07 4.4E-12 98.9 7.3 261 92-414 111-376 (376)
41 COG1785 PhoA Alkaline phosphat 98.3 3E-05 6.5E-10 82.0 16.4 75 249-346 283-357 (482)
42 PF00245 Alk_phosphatase: Alka 98.0 3.4E-06 7.5E-11 90.0 2.4 75 249-346 240-314 (421)
43 PRK04024 cofactor-independent 97.8 0.00016 3.6E-09 76.9 11.8 103 267-413 294-406 (412)
44 TIGR03396 PC_PLC phospholipase 97.4 0.011 2.4E-07 66.5 20.1 264 95-417 140-430 (690)
45 PRK13759 arylsulfatase; Provis 97.4 0.00033 7.1E-09 77.3 6.9 48 15-67 180-227 (485)
46 PF11658 DUF3260: Protein of u 97.2 0.05 1.1E-06 58.0 20.9 268 82-415 197-473 (518)
47 KOG4126|consensus 97.1 0.0053 1.2E-07 65.0 11.6 71 249-346 328-401 (529)
48 TIGR00306 apgM 2,3-bisphosphog 97.0 0.0045 9.7E-08 65.8 10.5 77 269-389 290-366 (396)
49 TIGR03368 cellulose_yhjU cellu 96.9 0.031 6.8E-07 59.2 15.7 266 82-414 195-469 (518)
50 COG3635 Predicted phosphoglyce 96.7 0.016 3.5E-07 59.3 11.1 99 269-412 299-407 (408)
51 TIGR02535 hyp_Hser_kinase prop 96.3 0.027 5.9E-07 60.0 11.1 58 307-388 307-365 (396)
52 PRK04200 cofactor-independent 96.3 0.023 5E-07 60.4 10.5 79 268-389 285-364 (395)
53 PRK04135 cofactor-independent 96.3 0.041 8.8E-07 58.0 11.6 99 268-413 281-389 (395)
54 KOG3867|consensus 95.8 0.013 2.8E-07 63.7 5.5 95 6-100 200-315 (528)
55 TIGR03417 chol_sulfatase choli 95.7 0.012 2.7E-07 65.1 5.1 46 17-67 162-210 (500)
56 PF07394 DUF1501: Protein of u 95.7 0.043 9.3E-07 58.9 9.0 96 304-416 263-368 (392)
57 KOG3731|consensus 95.3 0.02 4.3E-07 59.6 4.5 51 13-68 181-234 (541)
58 PF00884 Sulfatase: Sulfatase; 93.4 0.23 4.9E-06 50.8 7.6 49 14-68 150-198 (308)
59 COG3635 Predicted phosphoglyce 90.0 0.46 1E-05 49.0 5.0 62 80-142 3-72 (408)
60 PRK03776 phosphoglycerol trans 83.9 2.2 4.7E-05 48.9 6.4 35 15-49 303-338 (762)
61 COG3379 Uncharacterized conser 81.7 2 4.4E-05 44.7 4.7 24 395-418 436-459 (471)
62 PRK04135 cofactor-independent 81.5 1.6 3.6E-05 46.1 4.1 38 81-119 8-49 (395)
63 PRK04024 cofactor-independent 80.4 2 4.2E-05 46.2 4.3 38 82-119 4-45 (412)
64 PRK04200 cofactor-independent 80.1 1.7 3.8E-05 46.3 3.8 39 82-120 2-44 (395)
65 TIGR02535 hyp_Hser_kinase prop 79.8 1.8 4E-05 46.2 3.8 38 82-119 2-43 (396)
66 PF08665 PglZ: PglZ domain; I 75.6 3.7 8E-05 38.8 4.2 53 82-143 2-59 (181)
67 TIGR00306 apgM 2,3-bisphosphog 74.7 2.9 6.3E-05 44.7 3.6 36 84-119 1-40 (396)
68 PRK12363 phosphoglycerol trans 70.3 7.9 0.00017 44.3 5.9 35 15-49 300-335 (703)
69 PF08665 PglZ: PglZ domain; I 67.0 0.87 1.9E-05 43.0 -2.2 26 317-346 151-176 (181)
70 COG4102 Uncharacterized protei 58.8 44 0.00095 34.4 7.9 60 265-346 268-328 (418)
71 TIGR02687 conserved hypothetic 57.5 14 0.00029 43.7 4.8 35 306-346 596-630 (844)
72 COG3083 Predicted hydrolase of 53.4 19 0.00041 39.0 4.6 75 19-93 377-462 (600)
73 PRK13366 protocatechuate 4,5-d 52.4 17 0.00036 37.0 4.0 34 311-346 30-63 (284)
74 PF05991 NYN_YacP: YacP-like N 38.9 26 0.00056 32.5 2.7 32 312-346 77-108 (166)
75 cd00016 alkPPc Alkaline phosph 38.4 40 0.00087 35.9 4.4 31 16-48 232-262 (384)
76 cd07369 PydA_Rs_like PydA is a 37.7 47 0.001 34.5 4.7 34 311-346 28-61 (329)
77 TIGR02370 pyl_corrinoid methyl 34.0 1.9E+02 0.0042 27.5 8.0 50 253-340 125-174 (197)
78 PRK13364 protocatechuate 4,5-d 33.6 48 0.001 33.6 3.9 34 311-346 30-63 (278)
79 cd07364 PCA_45_Dioxygenase_B S 32.7 54 0.0012 33.2 4.1 32 313-346 32-63 (277)
80 cd07950 Gallate_Doxase_N The N 31.0 47 0.001 33.7 3.3 32 313-346 32-63 (277)
81 COG0696 GpmI Phosphoglyceromut 29.7 53 0.0011 35.6 3.5 36 80-116 3-40 (509)
82 PRK13365 protocatechuate 4,5-d 29.3 55 0.0012 33.2 3.5 33 312-346 31-63 (279)
83 cd07949 PCA_45_Doxase_B_like_1 29.3 55 0.0012 33.2 3.5 32 313-346 32-63 (276)
84 COG3885 Uncharacterized conser 28.2 1.3E+02 0.0028 29.2 5.4 34 308-346 143-176 (261)
85 TIGR01501 MthylAspMutase methy 26.6 4.6E+02 0.01 23.3 8.5 17 165-181 20-36 (134)
86 PLN02538 2,3-bisphosphoglycera 26.4 56 0.0012 36.3 3.1 35 80-115 20-56 (558)
87 cd07368 PhnC_Bs_like PhnC is a 23.9 96 0.0021 31.4 4.1 32 313-346 30-61 (277)
88 PRK05434 phosphoglyceromutase; 23.4 73 0.0016 35.3 3.3 35 80-115 4-40 (507)
89 TIGR01307 pgm_bpd_ind 2,3-bisp 23.3 67 0.0015 35.4 3.0 33 82-115 2-36 (501)
90 cd07366 3MGA_Dioxygenase Subun 22.0 1E+02 0.0022 32.2 3.8 29 316-346 73-101 (328)
91 COG5634 Uncharacterized conser 22.0 60 0.0013 29.9 1.9 47 575-628 93-139 (223)
92 COG3511 PlcC Phospholipase C [ 20.7 1.2E+03 0.025 25.9 17.2 74 102-176 154-230 (527)
93 KOG4513|consensus 20.1 89 0.0019 32.6 2.9 36 81-116 19-56 (531)
94 cd02070 corrinoid_protein_B12- 20.1 4.6E+02 0.01 24.9 7.8 50 253-340 123-172 (201)
No 1
>KOG3867|consensus
Probab=100.00 E-value=4.6e-68 Score=558.27 Aligned_cols=480 Identities=32% Similarity=0.447 Sum_probs=370.4
Q ss_pred hhccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeec-CCCCccceeeeccCCCCCcCccCCCCC---
Q psy12301 77 AALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIW--- 152 (632)
Q Consensus 77 a~~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~--- 152 (632)
+..+|||||||+||+++.+++|||+..+.|||||+||++|++|+|+|++ +.|+|||+++|||+||+++|+++....
T Consensus 26 ~~~~PNillIlaDDlG~gDlg~yG~~~i~TPniD~LA~~Gv~f~n~~~a~s~CtPSRaalLTGr~pirtGm~~~~~~r~~ 105 (528)
T KOG3867|consen 26 STDPPNILLILADDLGWGDLGCYGNKTIRTPNIDRLAAEGLLFTNAYAAVSLCSPSRAALLTGRYPIRTGMYHSVIYRVH 105 (528)
T ss_pred CCCCCCEEEEEEccCCCcccccCCCcccCCCCHHHHHhcccceecccccccccCchHHHHhcCCCccccccccceeEeec
Confidence 4558999999999999999999999999999999999999999999997 799999999999999999999988555
Q ss_pred -CCCCCCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCcccccc------CCccCCCCccccc-ccc--
Q psy12301 153 -GAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYL------NGVISYYDHILSD-QYS-- 222 (632)
Q Consensus 153 -~~~~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~------~~~~~~~~~~~~~-~~~-- 222 (632)
+....++|.+++||+++|+++||.|..|||||+|.....+.|..+|||+++|+. .+..+++...... ...
T Consensus 106 ~~~~~gglP~~E~tlae~l~~~GY~T~liGKWHLG~~~~~~~P~~rGFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (528)
T KOG3867|consen 106 HNFSPGGLPLNETTLAEILQEAGYSTGLIGKWHLGRSDPCYHPTNRGFDYFYGEPELHSPLLGPRDVLDVPEQALQFLGK 185 (528)
T ss_pred cCCCCCCcccchhHHHHHHHhCCccccccccccCCCCCCCcCCcccCccccccccccccccccccccccccchhhhhhcc
Confidence 466788999999999999999999999999999987889999999999999983 2333332221110 000
Q ss_pred ccccccccccccCcccccCCCCccchhHHHHHHHHHHHcC-CCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCC
Q psy12301 223 RTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIEDQ-PVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITD 301 (632)
Q Consensus 223 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~-~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~ 301 (632)
......++.+..+..........+..+.++..+...|+.+ ..++|+|++.....+|.....+|..++.++.........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~l~v~~p~~~~~~f~~~ 265 (528)
T KOG3867|consen 186 LKVSAKPFFLREGLHVPHRPGWYSSTGLPTFGACYLMRNHGLSEQPMFLYWAPPAAHKEAMDSPLHVHVPLFTPKTFAGR 265 (528)
T ss_pred cCccccchhhhhhcccccccCCccccccccchhhhhhhccCcCCCCceeeccchhhcccccccccccCccccCCccccch
Confidence 0000123334434444444455666777888888888876 578999999999999997777788888887777777788
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEE
Q psy12301 302 PNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAI 381 (632)
Q Consensus 302 ~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPli 381 (632)
..++.|.++|.++|..||+++++|++.|+++||+|+||||||....+. +.+.+++++++|.|...||+++|+|.+
T Consensus 266 s~~~~y~~~V~~mD~~VG~ildaL~~~gl~nnTiv~FtSDnG~~~~~~-----~~~~~~n~~~~g~~~~~weggir~~~~ 340 (528)
T KOG3867|consen 266 SKRGLYGDMVSEMDWSVGRILDALDDLGLANNTLVIFTSDNGGPLEGG-----RGNGGSNGPWNGIKKPGWEGGIRVPGL 340 (528)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEeCCCCccccCc-----cccccccCCccceecCCccccCCCcch
Confidence 889999999999999999999999999999999999999999998655 445678899999888899999999999
Q ss_pred EECCCCCCCCceecCccchhhHHHHHHHHhCCCCCCCCCCcCCcccccccccCCCCCCCCCCCccccHHhhhcCC-CCCC
Q psy12301 382 LWSPQIQQNPRVSLQMMHISDWLPTLYTAAGGDTSRLPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLLNT-PSRR 460 (632)
Q Consensus 382 i~~P~~~~~g~~~~~~vs~~Di~PTll~l~Gi~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~sl~~~l~~~~-~~~r 460 (632)
+++|+.+++|+++.+++|++||+||+++++|++.|.... +||+||+|+|.+.. .+.+
T Consensus 341 ~~~p~~~~~g~v~~e~~s~~D~~PTl~~lag~~~p~d~~----------------------idG~~l~p~L~g~~~~s~H 398 (528)
T KOG3867|consen 341 ARWPGVVPAGQVSNELTSLLDILPTLADLAGGPLPQDRV----------------------IDGRDLLPLLLGEARHSDH 398 (528)
T ss_pred hcCccccccceeccccccccccchHHHHHcCCCCCcCce----------------------ecccchHHHHhcccccCCc
Confidence 999999999999999999999999999999999986544 99999999999987 2222
Q ss_pred ceeEEeecCCCCeeEEEeCCcEEEEcccCCCCcccccCCCCCCCCccccchhhhhhhhhhhhhhhhcccccccccchhhh
Q psy12301 461 NSVLINIDEKKRTAAVRLDSWKLVLGTQENGTMDGYYGQTRSNKVPLLNFNAIVESKTYQSLQQLSQNIFLPISNIDKMR 540 (632)
Q Consensus 461 ~~~~~~~~~~~~~~avr~~~~K~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (632)
+ + ...++...++.++||.+.+ .++.|...-... .+.. .+ ..
T Consensus 399 ~-~----~~~y~~~~l~~~~~~~~~~-----~~~~w~~~y~t~---~~~p-------------~~-------------~~ 439 (528)
T KOG3867|consen 399 E-F----LFHYGGRYLHARRWKLVDN-----SFDIWKAHYETP---GFQP-------------EL-------------NG 439 (528)
T ss_pred c-c----eeccccchhcccceecccC-----CCcccccceecC---CcCc-------------ch-------------hh
Confidence 2 2 2334566779999999984 234453331111 0000 00 00
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCC-ccccCCCCcccccccc-ccChHHHHHHHHHHHHHHHHhCCCCCCCCCcc--c
Q psy12301 541 STRQQATIHCGANPAPMTPSPCTNGPC-YLFNLGNDPCEQNNIA-SSRPDISSQLYELLKYHRRTLVPQSHEQPDLV--Q 616 (632)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-eLydl~~DP~E~~nla-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~--~ 616 (632)
..+.+....|. ...|...+. +||||+.||+|+.||+ .+++.++..++.++..|......+.+.+.+ + .
T Consensus 440 ~~~~~~~~~~~-------~~~~~~~~~p~Lfdls~DP~E~~nLa~~~~~~~~~~l~~~~~~~~~~~~~~~~~~q~-~~~~ 511 (528)
T KOG3867|consen 440 ACRAQPVCWCL-------GLLVTYHKPPLLFDLSRDPGERYNLAPSEPPYILVLLRVQLAVWQHQTTLPPVPPQF-SVLN 511 (528)
T ss_pred hcccCCchhhh-------ccccccCCCCeeeecccCccccccCCcCccHHHHHHHHHHHHHHHHHhcCCCCCCcc-chhh
Confidence 00111111111 111344444 9999999999999999 589999999999999999888555554443 3 4
Q ss_pred cCCcCCCCeeecCC
Q psy12301 617 ADPKRFNDTWSPWI 630 (632)
Q Consensus 617 ~~~~~~~~~~~~~~ 630 (632)
..++.+...|..|.
T Consensus 512 ~~~~~~~~p~c~~~ 525 (528)
T KOG3867|consen 512 ELPKPWLQPCCGPL 525 (528)
T ss_pred ccCccccCCCCCCC
Confidence 45555555555554
No 2
>TIGR03417 chol_sulfatase choline-sulfatase.
Probab=100.00 E-value=2.6e-67 Score=576.15 Aligned_cols=389 Identities=23% Similarity=0.305 Sum_probs=292.8
Q ss_pred cCceEEEEEEccCCccccCCCC-CCCCCCcHHHHHHcccccceeeec-CCCCccceeeeccCCCCCcCccCCCCCCCCCC
Q psy12301 80 TKSTTLTLLIVYGWNDLSFHGS-NEIPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIWGAEPR 157 (632)
Q Consensus 80 ~pNIvlI~~D~~r~d~l~~~G~-~~~~TPnld~La~~Gv~F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~~ 157 (632)
+|||||||+|++|++.++|||+ ..+.|||||+||++|++|+|+|++ |+|+|||+|||||+||++||+..+. .
T Consensus 2 rPNIllI~~Dd~r~d~lg~~G~~~~~~TPnLD~LA~eGv~F~nay~~~p~C~PSRaSllTG~yp~~~G~~~~~------~ 75 (500)
T TIGR03417 2 RPNILILMADQLNGTLLPDYGPARWLHAPNLKRLAARSVVFDNAYCASPLCAPSRASFMSGQLPSRTGAYDNA------A 75 (500)
T ss_pred CCeEEEEEeCCCCccccccCCCCCcCCCCcHHHHHHhCceecccccCCCccHHHHHHHHHCCCHHhcCcccch------h
Confidence 6999999999999999999998 789999999999999999999985 9999999999999999999986542 2
Q ss_pred CCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccC-----Ccc-CCCCccccccccccccccccc
Q psy12301 158 GVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLN-----GVI-SYYDHILSDQYSRTVELNGHD 231 (632)
Q Consensus 158 ~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~-----~~~-~~~~~~~~~~~~~~~~~~g~~ 231 (632)
.++...+||+++|+++||+|+++||||+.... ..+||+..+.... +.. +|... .... .. .....
T Consensus 76 ~l~~~~~tl~~~L~~aGY~T~~~GK~H~~~~~-----~~~GF~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~--~~~~~ 145 (500)
T TIGR03417 76 EFPSDIPTYAHYLRRAGYRTALSGKMHFCGPD-----QLHGFEERLTTDIYPADFGWTPDWRKP--GERI-DW--YHNMG 145 (500)
T ss_pred hcCcCCCCHHHHHHHCCCeEEEeccccccCCc-----cccCcccccccccCccccCCCcccccc--cccc-cc--ccccc
Confidence 36667899999999999999999999985421 2458876532110 000 01000 0000 00 00000
Q ss_pred cccCcccccCCCCccchhHHHHHHHHHHHc---CCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCC--------
Q psy12301 232 MRRNLSTAWDTVGEYATDLFTKEAVQLIED---QPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYIT-------- 300 (632)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~---~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~-------- 300 (632)
................++.+++.+++||.. .+.++|||+++++..||. ||.+|+++.+.|....
T Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~kPFFl~vs~~~PH~-----P~~~p~~y~~~y~~~~~~~p~~~~ 220 (500)
T TIGR03417 146 SVTGAGPCERTNQLDYDDEVAFHARQKLYDLARGKDARPFCLTVSFTHPHD-----PYVIRRKYWDLYEDCEILMPEVAI 220 (500)
T ss_pred ccccCCcCcccccccCCHHHHHHHHHHHHHHhhccCCCCeEEEecCCCCcC-----CCcCCHHHHhhcCcccCCCCCCCC
Confidence 000000000001112234678889999974 246799999999999999 8888888776653210
Q ss_pred ----------------------------ChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccc
Q psy12301 301 ----------------------------DPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRET 352 (632)
Q Consensus 301 ----------------------------~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~ 352 (632)
...++.|+++|+++|.+||+||++|++.|++||||||||||||+.+.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~il~~L~~~g~~dnTivvf~sDHG~~~G~~--- 297 (500)
T TIGR03417 221 PYAEQDPHSQRLLDACDLWNFPITDEQIRRARRAYFGAISYLDDKIGELLQTLEETRQADDTIVLFTSDHGDMLGER--- 297 (500)
T ss_pred cccccChhhhhhhhhhccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcEEEEECCCchhhccC---
Confidence 0124679999999999999999999999999999999999999987222
Q ss_pred cCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceecCccchhhHHHHHHHHhCCCCCCC-CCCcCCccccccc
Q psy12301 353 SNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHISDWLPTLYTAAGGDTSRL-PLNIDGLDQWSSL 431 (632)
Q Consensus 353 ~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~~~vs~~Di~PTll~l~Gi~~p~~-~~~~~~~~~~~~~ 431 (632)
+. ..|..+||+++||||||++|+..++++ ++.+++++||+||||+++|++.|.. +.
T Consensus 298 ---------g~--~~K~~~ye~~~~vPlii~~p~~~~~~~-~~~~v~~~Di~pTil~l~g~~~~~~~~~----------- 354 (500)
T TIGR03417 298 ---------GL--WYKMSFFEGSARVPLMVHAPGRFAPGR-VAAPVSTVDLLPTLVDLAGGDMDEVLPW----------- 354 (500)
T ss_pred ---------Cc--ccccCcccccceEeEEEEeCCCCCCcc-cCCceeehhHHHHHHHHhCCCCcccCCC-----------
Confidence 11 247889999999999999999654544 5789999999999999999998742 12
Q ss_pred ccCCCCCCCCCCCccccHHhhhcCCCCCCceeEEeecC---CCCeeEEEeCCcEEEEcccCCCCcccccCCCCCCCCccc
Q psy12301 432 LLNTPSRRNSNIDGLDQWSSLLLNTPSRRNSVLINIDE---KKRTAAVRLDSWKLVLGTQENGTMDGYYGQTRSNKVPLL 508 (632)
Q Consensus 432 ~~~~~~~~~~~~dG~sl~~~l~~~~~~~r~~~~~~~~~---~~~~~avr~~~~K~i~~~~~~~~~~~~~~~~~~~~~~~~ 508 (632)
++|+||++++.|.. .|+.++.++.. ....++||+++||||...
T Consensus 355 -----------~~G~SL~~~l~g~~--~~~~v~~e~~~~~~~~~~~~ir~~~~K~i~~~--------------------- 400 (500)
T TIGR03417 355 -----------TDGRSLVPHLQGKG--GHDPVIGEYAAEGSYAPLVMIRRGRYKFVYCE--------------------- 400 (500)
T ss_pred -----------CCCeehHHHhcCCC--CCCeEEEEEecCCCcccceEEEcCCeEEEEec---------------------
Confidence 89999999998753 35667766532 234679999999999742
Q ss_pred cchhhhhhhhhhhhhhhhcccccccccchhhhccccccccccCCCCCCCCCCCCCCCCCccccCCCCccccccccc--cC
Q psy12301 509 NFNAIVESKTYQSLQQLSQNIFLPISNIDKMRSTRQQATIHCGANPAPMTPSPCTNGPCYLFNLGNDPCEQNNIAS--SR 586 (632)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eLydl~~DP~E~~nla~--~~ 586 (632)
..+.|||||.+||.|++||+. +|
T Consensus 401 -------------------------------------------------------~~~~eLyDL~~DP~E~~NLa~~p~~ 425 (500)
T TIGR03417 401 -------------------------------------------------------ADPDQLYDLEADPHELTNLADDPAH 425 (500)
T ss_pred -------------------------------------------------------CChhhhcCcccCcchhhhcccChhH
Confidence 001289999999999999997 79
Q ss_pred hHHHHHHHHHHHH-HHHHh
Q psy12301 587 PDISSQLYELLKY-HRRTL 604 (632)
Q Consensus 587 ~~~~~~l~~~l~~-~~~~~ 604 (632)
++++++|+++|.+ |....
T Consensus 426 ~~~~~~l~~~l~~~w~~~~ 444 (500)
T TIGR03417 426 ADTLAAFRAEAAARWDLPA 444 (500)
T ss_pred HHHHHHHHHHHHhhhcchh
Confidence 9999999999987 77544
No 3
>PRK13759 arylsulfatase; Provisional
Probab=100.00 E-value=1.4e-65 Score=560.32 Aligned_cols=398 Identities=25% Similarity=0.370 Sum_probs=298.5
Q ss_pred ccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeec-CCCCccceeeeccCCCCCcCccCCCCCCCCCC
Q psy12301 79 LTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIWGAEPR 157 (632)
Q Consensus 79 ~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~~ 157 (632)
.+||||||++|++|+++++|||+..+.|||||+||++|+.|+|+|++ ++|+|||+|||||+||.+||+.++..
T Consensus 5 ~rPNIl~I~~Ddlr~d~l~~~G~~~~~TPnld~La~~G~~F~nay~~~p~c~psr~sl~TG~yp~~~g~~~~~~------ 78 (485)
T PRK13759 5 KKPNIILIMVDQMRGDCLGCNGNKAVETPNLDMLASEGYNFENAYSAVPSCTPARAALLTGLSQWHHGRVGYGD------ 78 (485)
T ss_pred CCCCEEEEEECCCCHHHHHhcCCCcCCCccHHHHHhcCceeeceecCCCcchhhHHHHHhcCChhhcCcccccc------
Confidence 47999999999999999999999889999999999999999999985 99999999999999999999865421
Q ss_pred CCCC-CCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCcc---CC-----CCccc-c-c----c-c
Q psy12301 158 GVPL-TERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVI---SY-----YDHIL-S-D----Q-Y 221 (632)
Q Consensus 158 ~l~~-~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~---~~-----~~~~~-~-~----~-~ 221 (632)
..+. ..+||+++|+++||+|++|||||++.. ....||+.++.. .+.. .. +.... . . . .
T Consensus 79 ~~~~~~~~tl~~~l~~~GY~T~~~GK~h~~~~-----~~~~gfd~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (485)
T PRK13759 79 VVPWNYKNTLPQEFRDAGYYTQCIGKMHVFPQ-----RNLLGFHNVLLH-DGYLHSGRNEDKSQFDFVSDYLAWLREKAP 152 (485)
T ss_pred cccccccchHHHHHHHcCCeeEEecccccCCC-----cccCCccceecc-ccccccccccCcccccccchHHHHhhhhcC
Confidence 1222 467999999999999999999999642 124678764311 0000 00 00000 0 0 0 0
Q ss_pred ccccccc--ccccccC-cccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCC
Q psy12301 222 SRTVELN--GHDMRRN-LSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQY 298 (632)
Q Consensus 222 ~~~~~~~--g~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~ 298 (632)
....... +...... ..........+.+..++++|++||++++.++|||+++++.+||. ||.+|+++.++|..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~kPfFl~v~~~~pH~-----P~~~p~~~~~~y~~ 227 (485)
T PRK13759 153 GKDPDLTDIGWDCNSWVARPWDLEERLHPTNWVGSESIEFLRRRDPTKPFFLKMSFARPHS-----PYDPPKRYFDMYKD 227 (485)
T ss_pred CCCCcccccccccccccccccccccceeccHHHHHHHHHHHHhCCCCCCeEEEeCCCCCcC-----CCCCCHHHHHhccc
Confidence 0000000 0000000 00000012234566789999999997556799999999999999 89888887766643
Q ss_pred CC----------------------------------ChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCC
Q psy12301 299 IT----------------------------------DPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGA 344 (632)
Q Consensus 299 ~~----------------------------------~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~ 344 (632)
.. +..++.|.++|+++|.+||+|+++|++.|++||||||||||||+
T Consensus 228 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~l~~~l~~~g~~dnTiiv~tsDHG~ 307 (485)
T PRK13759 228 ADIPDPHIGDWEYAEDQDPEGGSIDALRGNLGEEYARRARAAYYGLITHIDHQIGRFLQALKEFGLLDNTIILFVSDHGD 307 (485)
T ss_pred cCCCCCCCCchhhhcccccccccchhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCeEEEEECCCcc
Confidence 10 01256899999999999999999999999999999999999999
Q ss_pred CCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCC---CCCCceecCccchhhHHHHHHHHhCCCCCCCCCC
Q psy12301 345 PTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQI---QQNPRVSLQMMHISDWLPTLYTAAGGDTSRLPLN 421 (632)
Q Consensus 345 ~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~---~~~g~~~~~~vs~~Di~PTll~l~Gi~~p~~~~~ 421 (632)
.+.. ++. ..|..+|++++||||||++|+. .+.+++++.+++++||+||||+++|++.|..
T Consensus 308 ~~g~------------~~~--~~k~~~~e~~~rVPlii~~p~~~~~~~~g~~~~~~v~~~Di~pTil~l~g~~~p~~--- 370 (485)
T PRK13759 308 MLGD------------HYL--FRKGYPYEGSAHIPFIIYDPGGLLAGNRGTVIDQVVELRDIMPTLLDLAGGTIPDD--- 370 (485)
T ss_pred cccc------------ccc--ccCCccccccceeeEEEecCCcccccCCCceecCcceecchHHHHHHHhCCCCCcC---
Confidence 8622 111 2467889999999999999984 2356778999999999999999999998754
Q ss_pred cCCcccccccccCCCCCCCCCCCccccHHhhhcCCCCCCceeEEeecC-CCCeeEEEeCCcEEEEcccCCCCcccccCCC
Q psy12301 422 IDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLLNTPSRRNSVLINIDE-KKRTAAVRLDSWKLVLGTQENGTMDGYYGQT 500 (632)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~dG~sl~~~l~~~~~~~r~~~~~~~~~-~~~~~avr~~~~K~i~~~~~~~~~~~~~~~~ 500 (632)
++|+||++++.|+....|+.++.++.. .....+||+++||||+...
T Consensus 371 ---------------------~~G~sl~~~l~g~~~~~r~~~~~~~~~~~~~~~~ir~~~~K~i~~~~------------ 417 (485)
T PRK13759 371 ---------------------VDGRSLKNLIFGQYEGWRPYLHGEHALGYSSDNYLTDGKWKYIWFSQ------------ 417 (485)
T ss_pred ---------------------cCCccchhhhcCCCccccceeeeecccccCCcceEEcCCeEEEEeCC------------
Confidence 999999999998655557766654322 1123459999999997520
Q ss_pred CCCCCccccchhhhhhhhhhhhhhhhcccccccccchhhhccccccccccCCCCCCCCCCCCCCCCCccccCCCCccccc
Q psy12301 501 RSNKVPLLNFNAIVESKTYQSLQQLSQNIFLPISNIDKMRSTRQQATIHCGANPAPMTPSPCTNGPCYLFNLGNDPCEQN 580 (632)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eLydl~~DP~E~~ 580 (632)
....|||||++||.|++
T Consensus 418 ---------------------------------------------------------------~~~~eLYDL~~DP~E~~ 434 (485)
T PRK13759 418 ---------------------------------------------------------------TGEEQLFDLKKDPHELH 434 (485)
T ss_pred ---------------------------------------------------------------CCHhhccCcccCcchhh
Confidence 00128999999999999
Q ss_pred cccc--cChHHHHHHHHHHHHHHHHhCC
Q psy12301 581 NIAS--SRPDISSQLYELLKYHRRTLVP 606 (632)
Q Consensus 581 nla~--~~~~~~~~l~~~l~~~~~~~~~ 606 (632)
||+. ++++++++|+++|.+|+.+..+
T Consensus 435 NLa~~~~~~~~~~~l~~~L~~~~~~~~~ 462 (485)
T PRK13759 435 NLSPSEKYQPRLREMRKKLVDHLRGREE 462 (485)
T ss_pred hhccCHhHHHHHHHHHHHHHHHHhccCc
Confidence 9996 7999999999999999998864
No 4
>COG3119 AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-55 Score=476.63 Aligned_cols=374 Identities=32% Similarity=0.496 Sum_probs=255.8
Q ss_pred cCceEEEEEEccCCccccCCCCCCC-CCCcHHHHHHcccccceeeec-CCCCccceeeeccCCCCCcCccCCCCCCCCCC
Q psy12301 80 TKSTTLTLLIVYGWNDLSFHGSNEI-PTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIWGAEPR 157 (632)
Q Consensus 80 ~pNIvlI~~D~~r~d~l~~~G~~~~-~TPnld~La~~Gv~F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~~ 157 (632)
+||||+|++|+++++.+++||.... .||++|+||++||+|+|+|++ +.|+|||++|+||+||.++|+..+........
T Consensus 4 rPNil~i~~Ddlg~~~l~~~g~~~~~~tp~~d~LA~~Gv~f~n~y~~~~~c~PsRa~l~TGr~~~~~G~~~~~~~~g~~~ 83 (475)
T COG3119 4 RPNILIIMADDLGYGDLGAYGGPVVGPTPNIDRLAAEGVRFTNAYTTSPCCGPSRAALLTGRYPFRTGVGGNAEPPGYPG 83 (475)
T ss_pred CCcEEEEEeccCCCCCCCcCCCccccCCCCHHHHHhcCceeeccccCcCCCchhhhHHhhCCCccccccccccCCCCccc
Confidence 8999999999999999999999766 999999999999999999997 55669999999999999999998854334455
Q ss_pred CCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCC--CCCCCccccccCCccCCCCccccccccccccccccccccC
Q psy12301 158 GVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPL--YRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRN 235 (632)
Q Consensus 158 ~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~--~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 235 (632)
.++...+||+++||++||.|+++||||++.... .+. ..||+.+++...+..+.+.......... .... .
T Consensus 84 ~l~~~~~Tla~~Lk~~GY~Ta~~GKwHl~~~~~--~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~ 154 (475)
T COG3119 84 GLPDEVPTLAELLKEAGYYTALFGKWHLGEKDE--DPAGGDHGFDEFYGFLGGLTDEWYPELVDVPPP------GDVP-E 154 (475)
T ss_pred ccCcccchHHHHHHHcCChhhhcccccCCCCcc--CccccccccccccccccccccccccccccCCCC------cCcc-c
Confidence 678899999999999999999999999997544 454 4899998887655554332222111100 0000 0
Q ss_pred cccccC--CCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcC----------------
Q psy12301 236 LSTAWD--TVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQ---------------- 297 (632)
Q Consensus 236 ~~~~~~--~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~---------------- 297 (632)
...... ............+..++......++|+|++......|.+... ++.....+...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (475)
T COG3119 155 FDQEEGDPYVAGKDSADLADRFRRQAKEDAPDKPPFLLTAPFAPPAPDPV-DFEWPDEYRGFYDRAKRLDRPFFLYLAPP 233 (475)
T ss_pred cccccCchhhhcchhhhhhhhhhhhcccccccCCceEEecCCCCCCCCcc-cchhhHHHhhhcchhhcccCccccccCCC
Confidence 000000 000001111122222222223345566666666666642110 0111111111100
Q ss_pred -------------------CCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCC
Q psy12301 298 -------------------YITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNW 358 (632)
Q Consensus 298 -------------------~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~ 358 (632)
......+..|.++|+++|.+||+||+.|++.|++||||||||||||..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~a~v~~~D~~iGrll~~L~~~g~~DnTivvftsDhG~~~~----------- 302 (475)
T COG3119 234 DPHLSRRLPAADGLPAEEEEDGARLMTVYAACVRYLDDQIGRLLDALKELGLLDNTIVVFTSDHGAWLG----------- 302 (475)
T ss_pred ccCccccCccchhccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCccCcEEEEeCCCCCccc-----------
Confidence 00012357899999999999999999999999999999999999997552
Q ss_pred CCCCcccCCCCcccCCcceeeEEEECCCCCC-CCceecCccchhhHHHHHHHHhCCCCCCCCCCcCCcccccccccCCCC
Q psy12301 359 GSNYPYRGVKNTLWEGGVKVPAILWSPQIQQ-NPRVSLQMMHISDWLPTLYTAAGGDTSRLPLNIDGLDQWSSLLLNTPS 437 (632)
Q Consensus 359 g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~-~g~~~~~~vs~~Di~PTll~l~Gi~~p~~~~~~~~~~~~~~~~~~~~~ 437 (632)
..++++++.|.++||+++||||||+||+.++ .+.+++.+++++||+||||+++|++.+. .++|..+.+.+-
T Consensus 303 ~~~~~~~~~k~~~~egg~~VPliI~~Pg~i~~~g~~~~~~v~~~Di~PTll~~aG~~~~~---~~~G~~~~~~~~----- 374 (475)
T COG3119 303 AHGTPFRGYKGTLYEGGTRVPLIIRWPGGIKPGGRVVDALVSLIDLLPTLLDAAGVPPPK---DLDGQSLPPKLQ----- 374 (475)
T ss_pred CCCCcccccccccccCcccceEEEeccCccCCCCccccccchhhHHHHHHHHHcCCCCcc---cccccccCcccc-----
Confidence 1234667888899999999999999999754 4778899999999999999999999875 244444443321
Q ss_pred CCCCCCCccccHHhhhcC-CCCCCceeEEeecCCCCeeEEEeCCcEEEEc
Q psy12301 438 RRNSNIDGLDQWSSLLLN-TPSRRNSVLINIDEKKRTAAVRLDSWKLVLG 486 (632)
Q Consensus 438 ~~~~~~dG~sl~~~l~~~-~~~~r~~~~~~~~~~~~~~avr~~~~K~i~~ 486 (632)
...++|++++..+.+. ... +. .+..+.+....++||+++||+|..
T Consensus 375 --~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~ir~~~~k~~~~ 420 (475)
T COG3119 375 --KPGLDGVPLLEWLAGGKAAV-RE-EYGYFGELFGLRAIRRDDWKYIVF 420 (475)
T ss_pred --ccCCCchhhhhhhcCccccc-cc-cccccccCCceEEEEcCCcccccc
Confidence 1126666666666653 211 11 112234556899999999999843
No 5
>PF00884 Sulfatase: Sulfatase; InterPro: IPR000917 Sulphatases 3.1.6. from EC are enzymes that hydrolyze various sulphate esters. The sequence of different types of sulphatases are available and have shown to be structurally related [, , ]; these include: arylsulphatase A 3.1.6.8 from EC (ASA), a lysosomal enzyme which hydrolyses cerebroside sulphate; arylsulphatase B 3.1.6.12 from EC (ASB), which hydrolyses the sulphate ester group from N-acetylgalactosamine 4-sulphate residues of dermatan sulphate; arylsulphatase C (ASD) and E (ASE); steryl-sulphatase 3.1.6.2 from EC (STS), a membrane bound microsomal enzyme which hydrolyses 3-beta-hydroxy steroid sulphates; iduronate 2-sulphatase precursor 3.1.6.13 from EC (IDS), a lysosomal enzyme that hydrolyses the 2-sulphate groups from non-reducing-terminal iduronic acid residues in dermatan sulphate and heparan sulphate; N-acetylgalactosamine-6-sulphatase 3.1.6.4 from EC, which hydrolyses the 6-sulphate groups of the N-acetyl-d-galactosamine 6-sulphate units of chondroitin sulphate and the D-galactose 6-sulphate units of keratan sulphate; glucosamine-6-sulphatase 3.1.6.14 from EC (G6S), which hydrolyses the N-acetyl-D-glucosamine 6-sulphate units of heparan sulphate and keratan sulphate; N-sulphoglucosamine sulphohydrolase 3.10.1.1 from EC (sulphamidase), the lysosomal enzyme that catalyses the hydrolysis of N-sulpho-d-glucosamine into glucosamine and sulphate; sea urchin embryo arylsulphatase 3.1.6.1 from EC; green algae arylsulphatase 3.1.6.1 from EC, which plays an important role in the mineralisation of sulphates; and arylsulphatase 3.1.6.1 from EC from Escherichia coli (aslA), Klebsiella aerogenes (gene atsA) and Pseudomonas aeruginosa (gene atsA). ; GO: 0008484 sulfuric ester hydrolase activity, 0008152 metabolic process; PDB: 1P49_A 1FSU_A 2QZU_A 2W5Q_A 2W5T_A 2W5S_A 2W5R_A 3LXQ_A 1HDH_B 1E33_P ....
Probab=100.00 E-value=5e-44 Score=370.38 Aligned_cols=299 Identities=27% Similarity=0.437 Sum_probs=221.7
Q ss_pred CceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeec-CCCCccceeeeccCCCCCcCccCCCCCCCCCCCC
Q psy12301 81 KSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIWGAEPRGV 159 (632)
Q Consensus 81 pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~~~l 159 (632)
||||+|++|++|.++++++|.....||+|++|+++|++|+|+|++ +.|.||++++|||+++..+|+..+..... ...
T Consensus 1 pNVv~i~~Es~~~~~~~~~~~~~~~tP~l~~l~~~g~~f~~~~s~~~~T~~s~~~~ltG~~~~~~~~~~~~~~~~--~~~ 78 (308)
T PF00884_consen 1 PNVVLIVLESLRADDLSCYGYPIPTTPNLDRLAENGLRFSNAYSSGPWTSPSRFSMLTGLYPHNSGVYSNGPYQQ--FNL 78 (308)
T ss_dssp -EEEEEEETT--TTSSGGGTSSSSSSHHHHHHHHTSEEESSEE-SSSSHHHHHHHHHHSS-HHHHT-SSSCSTTT--CSS
T ss_pred CEEEEEEcccCCCCCCCCCCCCcccCHHHHHhhhccEEEEEEEeccCccccchhhhccccccccccccccccccc--ccc
Confidence 899999999999999999999888899999999999999999996 78999999999999999998765532111 235
Q ss_pred CCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCcccc
Q psy12301 160 PLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLSTA 239 (632)
Q Consensus 160 ~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 239 (632)
.....+|+++|+++||+|.++++++..+..........||+.+++.......+......... . ...
T Consensus 79 ~~~~~~l~~~l~~~GY~t~~~~~~~~~~~~~~~~~~~~gfd~~~~~~~~~~~~~~~~~~~~~-----------~---~~~ 144 (308)
T PF00884_consen 79 PSKFPSLPDLLKKAGYRTSFFGPWDASFYNNQAFYPSHGFDYFLGQPGLSDRIDNPRISGPF-----------N---DVN 144 (308)
T ss_dssp TTTS--HHHHHHHTT-EEEEEEES-STGGGHHCHCHHTT-SEEEEESSSGGGTTSSTTEEEC-----------T---TTT
T ss_pred cccccccHHHHhhcccccceeeccccCccccccccccCCcceEEeeeccccccccccccccc-----------c---ccc
Confidence 56788999999999999999999988765443333467999876632222111111100000 0 000
Q ss_pred cCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCC-------hhHHHHHHHHH
Q psy12301 240 WDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITD-------PNRRTYAAMVK 312 (632)
Q Consensus 240 ~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~-------~~~~~Y~~~i~ 312 (632)
........++.+.+.++++|.... ++|||+++++..+|. |+..++++...+..... ..++.|.++|.
T Consensus 145 ~~~~~~~~d~~~~~~~~~~l~~~~-~~p~f~~~~~~~~H~-----P~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~ 218 (308)
T PF00884_consen 145 RSNEWGYSDDALFDYAIDFLLNED-DKPFFLFIHTMGPHG-----PYPYPPDYAEKFPKFSPDIPDKDREMRNNYLNAIA 218 (308)
T ss_dssp ESTTTCEHHHHHHHHHHHHHHCTT-TSSEEEEEEE-TTSS-----STCTTCCHHHGGTTCSSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhhhhhhhhhhhhcc-cccceeEEeeccccc-----cccccccccccccccccccccchhhhHHHHHHHHH
Confidence 012235678889999999985444 899999999999999 88888777766554433 56789999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCC-cccCCcceeeEEEECCCCCCCC
Q psy12301 313 KLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKN-TLWEGGVKVPAILWSPQIQQNP 391 (632)
Q Consensus 313 ~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~-~~~e~~~~VPlii~~P~~~~~g 391 (632)
++|++||+|++.|++.|+++||+|||+||||+.+.+. .....+.+. ..+++.+||||||++|+..+.
T Consensus 219 ~~D~~l~~~~~~l~~~~~~d~TiiiitsDHG~~~~e~-----------~~~~~~~~~~~~~~~~~~vP~~i~~p~~~~~- 286 (308)
T PF00884_consen 219 YVDDQLGRFIEYLKEQGLYDNTIIIITSDHGESFGEN-----------GHYFHGGKGNDLYEESYHVPLIIYWPGGEPQ- 286 (308)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGEEEEEEESSSSSTGGH-----------HTTSSSSTTHSSSHHHHBEEEEEECTTSSSC-
T ss_pred HHHHHhhhhhhhhhhcCCcccceeEEecCcCcccccc-----------cccccccccccchhhccccceEEEcCCCCCC-
Confidence 9999999999999999999999999999999988320 112234555 789999999999999998765
Q ss_pred ceecCccchhhHHHHHHHHhCC
Q psy12301 392 RVSLQMMHISDWLPTLYTAAGG 413 (632)
Q Consensus 392 ~~~~~~vs~~Di~PTll~l~Gi 413 (632)
++.+.++|++||+||||+|+||
T Consensus 287 ~~~~~~~s~~Di~pTll~l~Gi 308 (308)
T PF00884_consen 287 QTIDRLVSHIDIAPTLLDLLGI 308 (308)
T ss_dssp EEECS-EEGGGHHHHHHHHTT-
T ss_pred cEECCeEEhHHHHHHHHHHhCC
Confidence 6789999999999999999997
No 6
>KOG3731|consensus
Probab=100.00 E-value=8.6e-43 Score=347.92 Aligned_cols=314 Identities=20% Similarity=0.283 Sum_probs=243.4
Q ss_pred CceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeec-CCCCccceeeeccCCCCCcCccCCCCC--CCCCC
Q psy12301 81 KSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIW--GAEPR 157 (632)
Q Consensus 81 pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~--~~~~~ 157 (632)
||||+|+.||+. ..+|+-.+.+|.++-+++.|..|+++|++ |.|+|||.|++||+|++.|+++.+... .....
T Consensus 35 PNvIlvLTDDqD----~eLGsm~vm~kt~~~~~dgg~~Fi~aYvttslCcPSRnSiLTGky~hnhhv~tnn~ncss~~Wq 110 (541)
T KOG3731|consen 35 PNVILVLTDDQD----VELGSMAVMFKTLTIMLDGGAHFISAYVTTSLCCPSRNSILTGKYVHNHHVYTNNENCSSPSWQ 110 (541)
T ss_pred CCEEEEEccCcc----hhcccccccchHHHHHhcCCceEEecccCccccccccchhhhccccccccccccccccCchhHh
Confidence 899999999996 44677788999999999999999999995 999999999999999999999877221 11112
Q ss_pred CCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCcc
Q psy12301 158 GVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLS 237 (632)
Q Consensus 158 ~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (632)
..-...+..+.+..++||+|+++||.-..+ +..+.|. ||+++.+. .....||+...+.+... ..
T Consensus 111 ~~he~~t~~~~l~~~~GYrT~~~GKylney-~gsyiPp--gW~ew~~l-~knskfyNytv~~Ng~~------------~k 174 (541)
T KOG3731|consen 111 ADHEKRTFAVYLAIDQGYRTAFFGKYLNEY-NGSYIPP--GWSEWAGL-IKNSKFYNYTVCKNGIK------------EK 174 (541)
T ss_pred hhhccCchhhhhhhhhceeeecchhhcccc-CcccCCC--Cchhhhcc-ccccchhcchhhcCccc------------cc
Confidence 222234444555555999999999963333 4466665 88888764 44567888777655311 11
Q ss_pred cccCCCCccchhHHHHHHHHHHHcC---CCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCC--------------
Q psy12301 238 TAWDTVGEYATDLFTKEAVQLIEDQ---PVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYIT-------------- 300 (632)
Q Consensus 238 ~~~~~~~~~~~~~~~~~a~~~i~~~---~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~-------------- 300 (632)
........|.++.++...+.|++.. .+.+||||.+++.+||. |+..++.|...|....
T Consensus 175 hg~~y~kdyltDlitn~s~~ff~~s~~~~~~~Pf~l~is~~aPHg-----ped~apQf~~~F~n~~~h~t~s~n~aPnpd 249 (541)
T KOG3731|consen 175 HGSDYSKDYLTDLITNDSLLFFDGSKKRHSQEPFFLAISFPAPHG-----PEDSAPQFSHLFNNVQFHRTPSYNLAPNPD 249 (541)
T ss_pred cccccchhhhchhhhhhhHHHHhhccccccCCCeEEEeccCCCCC-----CCCccHHHHHhccccccccCcccccCCCCc
Confidence 1122334688899999999999843 34789999999999999 8888888776554211
Q ss_pred -------------------ChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCC
Q psy12301 301 -------------------DPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSN 361 (632)
Q Consensus 301 -------------------~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~ 361 (632)
+-....-++.+..+|+.|.+|.+.|++.|.+|||.||+|||||.+++.+
T Consensus 250 k~W~~~~t~pm~~ih~~ft~~l~rkrlQtlqSvd~sve~l~n~l~elgeLdnTyivytsDhGyhlGqf------------ 317 (541)
T KOG3731|consen 250 KHWILRTTGPMSNIHIPFTNILPRKRLQTLQSVDDSVERLYNLLGELGELDNTYIVYTSDHGYHLGQF------------ 317 (541)
T ss_pred cceeeeeccCCCccccccccchHHHHHHHHHhHHHHHHHHHHHHHHhhcccceEEEEEcCCccccccc------------
Confidence 1123455677889999999999999999999999999999999998322
Q ss_pred CcccCCCCcccCCcceeeEEEECCCCCCCCceecCccchhhHHHHHHHHhCCCCCCCCCCcCCcccccccccCCCCCCCC
Q psy12301 362 YPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHISDWLPTLYTAAGGDTSRLPLNIDGLDQWSSLLLNTPSRRNS 441 (632)
Q Consensus 362 ~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~~~vs~~Di~PTll~l~Gi~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (632)
++..+|..+||-.+||||+|++||+. ++++++.+|-.+||+|||||+||++.|..
T Consensus 318 -gl~kgks~pyEfdiRVPf~iRgP~v~-~~~~~~~Iv~niDlaPTilDiAGlp~p~~----------------------- 372 (541)
T KOG3731|consen 318 -GLWKGKSMPYEFDIRVPFLIRGPGVA-PNKTVNEIVLNIDLAPTILDIAGLPKPAC----------------------- 372 (541)
T ss_pred -ccccCCCCceeEeeeeeEEeeCCCCC-ccccchhhheeccccchhhhhcCCCCccc-----------------------
Confidence 23346778899999999999999974 57888999999999999999999999854
Q ss_pred CCCccccHHhhhcCCC
Q psy12301 442 NIDGLDQWSSLLLNTP 457 (632)
Q Consensus 442 ~~dG~sl~~~l~~~~~ 457 (632)
++|+||++++.....
T Consensus 373 -mdg~sll~ll~~~~~ 387 (541)
T KOG3731|consen 373 -MDGRSLLPLLGKSKY 387 (541)
T ss_pred -ccccchhhhhccchh
Confidence 999999998876543
No 7
>PRK03776 phosphoglycerol transferase I; Provisional
Probab=100.00 E-value=2.3e-36 Score=330.99 Aligned_cols=308 Identities=15% Similarity=0.129 Sum_probs=220.2
Q ss_pred hhhhccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeee--c-CCCCccceeeeccCCCCCcCccCCCC
Q psy12301 75 TYAALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYA--Q-PVCTPSRASLMTGKYPIHTGMQGPPI 151 (632)
Q Consensus 75 ~~a~~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys--~-~~~~Psr~sllTG~~p~~~g~~~~~~ 151 (632)
.....+||||+|++||+....++..+. ...||+|++|+++|+.|+|++. . ..|..+..++++|. |.......+..
T Consensus 156 ~~p~kK~NVViI~LESle~ty~d~~~~-~~ltP~LdkLakegl~FsN~~q~~gt~~Ti~GmfAs~cGl-Pl~~pf~~n~s 233 (762)
T PRK03776 156 TIPNPKLNLVYIYGESLERTYFDNEAF-PGLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGI-PLFAPFEGNAS 233 (762)
T ss_pred ccCCCCCcEEEEEEecCChhhhccCCC-CCCChhHHHHHhcCeeecCceecCCCCccHHHHHHHHcCC-CCCCCCCCccc
Confidence 456789999999999999988876554 5789999999999999999873 3 56778899999997 33221111110
Q ss_pred CCCCCCCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccc
Q psy12301 152 WGAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHD 231 (632)
Q Consensus 152 ~~~~~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 231 (632)
......-+...||+++||++||+|.++++|+.++.+.......+|||++++... ....+
T Consensus 234 --~~~~~f~P~~~cLgdILK~~GY~T~Fi~G~d~~F~n~~~f~~~hGFD~~yg~~d-~~~~~------------------ 292 (762)
T PRK03776 234 --ASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEE-LKSVV------------------ 292 (762)
T ss_pred --ccccccCCccccHHHHHHhCCCceEEEeCCCcCcCchhhhHHhCCCcEEecchh-ccccc------------------
Confidence 001112235579999999999999999999999988888888899998876321 00000
Q ss_pred cccCcccccCCCCccchhHHHHHHHHHHHc-CCCCCCeEEeccCcCCCCCCCCCCCCCChHHH--hhcCCCCChhHHHHH
Q psy12301 232 MRRNLSTAWDTVGEYATDLFTKEAVQLIED-QPVDKPLFLYLAHLAAHAGNAGKHLEAPQETI--NQFQYITDPNRRTYA 308 (632)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~-~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~--~~~~~~~~~~~~~Y~ 308 (632)
....+.....+.|+.+.+++++.+++ .+.++|||+++.+.++|. |+..+.+.. ..+. .+.....|.
T Consensus 293 ----~~~~~~n~WG~~Dd~Lfd~A~e~l~eLsk~~kPFfl~llTlstH~-----P~g~~~~~c~~~~y~--~~g~~~~~~ 361 (762)
T PRK03776 293 ----ADPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHH-----PDGFISRTCNRKSYD--FDGKPNQSF 361 (762)
T ss_pred ----ccccccCCcccCcHHHHHHHHHHHHHhhcCCCCEEEEecCCCCcC-----CCccCchhhcccccc--cCCcchHHH
Confidence 00001112346788899999987775 346789999999999999 654332211 1121 111235678
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCC
Q psy12301 309 AMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQ 388 (632)
Q Consensus 309 ~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~ 388 (632)
++|+++|++||+|+++|+++|++|||+|||+||||.+...+ +.. .......+++|||.+|+.
T Consensus 362 ~~v~~~D~~iG~fi~~Lk~~g~~dNTiIV~~sDHG~m~g~~------------~~~-----l~~~kr~~i~lII~~p~~- 423 (762)
T PRK03776 362 SAVSCSQENIAALINKIKASPWFKNTVIVVSSDHLAMNNTA------------WKY-----LNKQDRNNLFFVIRGDKP- 423 (762)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccCeEEEEEccCCcccccc------------chh-----hccCCceeEEEEEECCCc-
Confidence 99999999999999999999999999999999999875211 000 011123578899999983
Q ss_pred CCCceecCccchhhHHHHHHHHhCCCCCCCCCCcCCcccccccccCCCCCCCCCCCccccHHhhhc
Q psy12301 389 QNPRVSLQMMHISDWLPTLYTAAGGDTSRLPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLL 454 (632)
Q Consensus 389 ~~g~~~~~~vs~~Di~PTll~l~Gi~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~sl~~~l~~ 454 (632)
++++++..++++||+||||+++|++.... +- ...++|+||++++..
T Consensus 424 -~g~~~~~~vs~IDI~PTILdlaGi~~~lg------lG-------------~nllsG~SL~pll~~ 469 (762)
T PRK03776 424 -QQETLAVKRNTMDNGATVLDILGGDNYIG------LG-------------RSSLSGQSLSEIFLN 469 (762)
T ss_pred -CCceECCceeehhHHHHHHHHhCCCcccc------CC-------------cccCCCCCHHHHHHH
Confidence 45677999999999999999999974211 00 001899999999875
No 8
>PRK12363 phosphoglycerol transferase I; Provisional
Probab=100.00 E-value=7.7e-36 Score=327.06 Aligned_cols=290 Identities=15% Similarity=0.122 Sum_probs=202.4
Q ss_pred hhccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeecCCCCccceeee---ccCCCCCcCcc-CCCCC
Q psy12301 77 AALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQPVCTPSRASLM---TGKYPIHTGMQ-GPPIW 152 (632)
Q Consensus 77 a~~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~~~~~Psr~sll---TG~~p~~~g~~-~~~~~ 152 (632)
.+.+||||+|++||++...++..+. ...||||++|+++|+.|+|+|+++.|..+..+|. +|. |...... .+..
T Consensus 153 ~aKk~NVVvI~LESle~~~id~~~~-~~lTPnLd~Lakegl~FtNfy~~~G~g~Ti~Gl~as~~Gl-Pl~~~~g~~Nt~- 229 (703)
T PRK12363 153 LQKRKNIVWIYGESLERTYFDEDVF-PGLMPNLTRLATEAVDVRNLASTEGSGWTIAGMVASMCGV-PLTTAQGDENSM- 229 (703)
T ss_pred ccCCCCEEEEEEccCchhhhcCCCC-CCcChhHHHHHhCCeeECCeEeCCCCCcchhhHhHHHhCC-CCcCCCCccccc-
Confidence 3568999999999999887877665 4689999999999999999997655544444443 342 2111000 0100
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCcccccccccccccccccc
Q psy12301 153 GAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDM 232 (632)
Q Consensus 153 ~~~~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 232 (632)
. ....+.+...+|+++|+++||+|++++..+..+++.......+|||++++. ++|.....
T Consensus 230 ~-~~~~f~p~~~~La~ILkq~GY~Taf~hG~~~sF~nrd~fyk~hGFD~f~d~-----~~f~~~~~-------------- 289 (703)
T PRK12363 230 D-RMGHFLPEARCLGDYLKDQGYTNHYVGGADASFAGKGKFLSSHGFDEVHDV-----NYFLHDKG-------------- 289 (703)
T ss_pred c-cccccCcccchHHHHHHhCCCcEEEEeCCCcCcCchhhHHHhCCCCEEeec-----hhhccccc--------------
Confidence 0 011234467899999999999999999888888777777788999987652 12210000
Q ss_pred ccCcccccCCCCccchhHHHHHHHHHHHcC-CCCCCeEEeccCcCCCCCCCCCCCC-CChHHHhhcCCCCChhHHHHHHH
Q psy12301 233 RRNLSTAWDTVGEYATDLFTKEAVQLIEDQ-PVDKPLFLYLAHLAAHAGNAGKHLE-APQETINQFQYITDPNRRTYAAM 310 (632)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~-~~~~Pffl~~~~~~~H~p~~~~P~~-~p~~~~~~~~~~~~~~~~~Y~~~ 310 (632)
............|+.+.+.++++|++. +.++|||+++.+.++|. |+. .|+........ .......|.++
T Consensus 290 ---~~~~~~~~WGl~Dd~lfd~A~~~Le~Ls~~~qPFfl~llTvsnH~-----Py~~lp~~~~~~~~~-~~~gd~~Yl~t 360 (703)
T PRK12363 290 ---VAPKHFSAWGVHDDVLLDDAYDEFETLSRAGQPFMLTTLTMDTHH-----PAGHLPSACKGQRYD-SPLGDIGMLHA 360 (703)
T ss_pred ---cCcccCCCCCcccHHHHHHHHHHHHhhhccCCCEEEEeeCCCCCC-----CcccCchhccccccc-cccccHHHHHH
Confidence 000011122356888999999999863 45799999999999999 542 22211111100 11113679999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCC
Q psy12301 311 VKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQN 390 (632)
Q Consensus 311 i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~ 390 (632)
++++|++||+|++.||++|++|||+|||+||||....+. ... .....|||++|++|+..++
T Consensus 361 I~ysD~aIG~FId~LKksglydNTIIV~~GDH~~~~~~~-----------~~~--------L~~~kRvP~~I~ip~gik~ 421 (703)
T PRK12363 361 IKCSDRLIGQLVDRIRNSRYGKNTIIVIASDHLAMPNDL-----------SDV--------LTKQKRENLLLFLGKDIAP 421 (703)
T ss_pred HHHHHHHHHHHHHHHHhcCCcCCeEEEEEcCCCcccccc-----------ccc--------CCCCCeEEEEEEECCcCCC
Confidence 999999999999999999999999999999999654110 111 1223589999888665566
Q ss_pred CceecCccchhhHHHHHHHHhCCCCCC
Q psy12301 391 PRVSLQMMHISDWLPTLYTAAGGDTSR 417 (632)
Q Consensus 391 g~~~~~~vs~~Di~PTll~l~Gi~~p~ 417 (632)
+.+.+..++++||+||||+++|++.+.
T Consensus 422 g~i~~~~gS~iDI~PTLL~LLGi~~~~ 448 (703)
T PRK12363 422 QQVVTRAGTTLDSGATLLQLLEPGMRT 448 (703)
T ss_pred CcEECCeeeeeHHHHHHHHHhCCCCCC
Confidence 777799999999999999999997653
No 9
>PRK09598 lipid A phosphoethanolamine transferase; Reviewed
Probab=100.00 E-value=9.9e-34 Score=307.19 Aligned_cols=270 Identities=14% Similarity=0.143 Sum_probs=196.9
Q ss_pred hccCceEEEEEEccCCccccCCCCCCCCCCcHHH-HHHcccccceeeec-CCCCccceeeeccCCCCCcCccCCCCCCCC
Q psy12301 78 ALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDA-LAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIWGAE 155 (632)
Q Consensus 78 ~~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~-La~~Gv~F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~~~~ 155 (632)
+.++|||+|+.|++|++++++||+++.+||+|++ ++++|+.|.|++++ +.|.+|+++||||.++..+.
T Consensus 221 ~~~~~vVlViGES~R~d~~slyGY~r~TTP~L~~~la~~~~~f~n~~S~gt~T~~Slp~mls~~~~~~~~---------- 290 (522)
T PRK09598 221 HSKSVVVLVIGESARKHNYALYGYEKPTNPRLSKRLATHELTLFNATSCATYTTASLECILDSSFKNTSN---------- 290 (522)
T ss_pred CCCCEEEEEEECCccHhhcccCCCCCCCChhhhhhcccCceEEcceeeCCCCHHHHHHHHccCCCccccc----------
Confidence 4578999999999999999999999999999977 66789999999996 88999999999998875421
Q ss_pred CCCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccC
Q psy12301 156 PRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRN 235 (632)
Q Consensus 156 ~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 235 (632)
...+|+++|+++||+|.++++++ |. ...+++.+.+. .++..
T Consensus 291 ------~~~nl~~ilk~aGy~T~W~snq~-g~-------~~~~~~~~~~~----~~~~~--------------------- 331 (522)
T PRK09598 291 ------AYENLPTYLTRAGIKVFWRSAND-GE-------PNVKVTSYLKN----YELIQ--------------------- 331 (522)
T ss_pred ------ccCCHHHHHHHCCCeEEEEECCC-CC-------CCccceeeccc----hhccc---------------------
Confidence 22479999999999999999864 11 01122222110 00000
Q ss_pred cccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCC----------CChhHH
Q psy12301 236 LSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYI----------TDPNRR 305 (632)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~----------~~~~~~ 305 (632)
.........|+.+.+.+.++|++.. ++|+|+++|++++|.|+.. ...|+++ ++|.+. .+...+
T Consensus 332 ---~~~~~~~~~De~LL~~l~~~l~~~~-~~p~fivlH~~GSH~P~Y~--~RyP~~f-~~F~p~~~~~~l~~~~~~~~~n 404 (522)
T PRK09598 332 ---KCPNCEAPYDESLLYNLPELIKASS-NENVLLILHLAGSHGPNYD--NKYPLNF-RVFKPVCSSVELSSCSKESLIN 404 (522)
T ss_pred ---cCCCCCCCCHHHHHHHHHHHHHhcC-CCCeEEEEeCcCCCCCccc--ccCChhh-cccCCCCcchhhhhccHHHHHH
Confidence 0000011245666778888888632 4799999999999994211 1235554 444332 123457
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccC-CCCcccCCcceeeEEEEC
Q psy12301 306 TYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRG-VKNTLWEGGVKVPAILWS 384 (632)
Q Consensus 306 ~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g-~k~~~~e~~~~VPlii~~ 384 (632)
.|+++|.++|..||++++.|++.+. ||+||++||||+.+.++ +.++ .| .+...+++++|||||||+
T Consensus 405 ~YdnsI~ytD~~l~~ii~~Lk~~~~--~t~iIy~SDHGe~lge~------g~~~-----hg~p~~~~~~~~~~VP~ii~~ 471 (522)
T PRK09598 405 AYDNTIFYNDYLLDKIISMLKNLKQ--PALMIYLSDHGESLGEG------AFYL-----HGIPKSIAPKEQYEIPFIVWA 471 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC--CeEEEEEccCccccccC------Cccc-----CCCCcCCCccccccccEEEEE
Confidence 8999999999999999999999886 99999999999997221 1111 01 123567899999999999
Q ss_pred CCCCCCC---ceecCccchhhHHHHHHHHhCCCCC
Q psy12301 385 PQIQQNP---RVSLQMMHISDWLPTLYTAAGGDTS 416 (632)
Q Consensus 385 P~~~~~g---~~~~~~vs~~Di~PTll~l~Gi~~p 416 (632)
|+..+++ ...+.++|+.||+||||+++|++.+
T Consensus 472 s~~~~~~~~~~~~~~~~S~ddif~TlL~l~gv~t~ 506 (522)
T PRK09598 472 SDSFKKQHSIIQTQTPINQNVIFHSVLGVFDFKNP 506 (522)
T ss_pred ChhhhhhchhhhcCCCchHHHHHHHHHHHcCCCCc
Confidence 8754433 2457899999999999999999886
No 10
>PRK10649 hypothetical protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=306.78 Aligned_cols=276 Identities=17% Similarity=0.198 Sum_probs=192.1
Q ss_pred cCceEEEEEEccCCccccCCCCCCCCCCcHHHHHH---cccccceeeec-CCCCccceeeeccCCCCCcCccCCCCCCCC
Q psy12301 80 TKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAY---NGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIWGAE 155 (632)
Q Consensus 80 ~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~---~Gv~F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~~~~ 155 (632)
.+|||+|+.|+.|++.+++||+++.+||+||+|++ +++.|+|++++ +.|.+|++++||..... +
T Consensus 236 p~niVlVIGES~r~d~~slyGY~r~TTP~Ld~l~~~~~~~~~F~n~~S~~~~T~~Sl~~~LS~~~~~------~------ 303 (577)
T PRK10649 236 PRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLTVFNNVVTSRPYTIEILQQALTFADEK------N------ 303 (577)
T ss_pred CCeEEEEEEeccCHhhccccCCCCCCChhHHhhhccCCCeEEeCceecCCcCHHHHHHHHccCCccc------c------
Confidence 44999999999999999999999999999999998 88999999996 89999999999842110 0
Q ss_pred CCCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccC
Q psy12301 156 PRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRN 235 (632)
Q Consensus 156 ~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 235 (632)
.......++|+++|+++||+|.++++++.-..... +++.+... .. ..+|. ..
T Consensus 304 -~~~~~~~~~l~~llk~aGY~T~wisNq~~~~~~~~------~~~~~~~~-~d-~~~f~-------------------~~ 355 (577)
T PRK10649 304 -PDLYLTQPSLMNMMKQAGYKTFWITNQQTMTARNT------MLTVFSRQ-TD-KQYYM-------------------NQ 355 (577)
T ss_pred -hhhhccCCCHHHHHHHCCCeEEEEeCCccccccch------hhhHhhhh-cc-chhhc-------------------cc
Confidence 01112456899999999999999998654110000 11110000 00 00000 00
Q ss_pred cccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCC--CCChHHHhhcCCCC-----------Ch
Q psy12301 236 LSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHL--EAPQETINQFQYIT-----------DP 302 (632)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~--~~p~~~~~~~~~~~-----------~~ 302 (632)
.. ......+ |+.+.....++|+. ..+|+|+++|++++|. || ..|+++ ++|.... .+
T Consensus 356 ~~--~~~~~~~-D~~LL~~l~~~L~~--~~~~~fivlHl~GsH~-----~Y~~RyP~~~-~~F~~~~~~~~~~~~~~~~~ 424 (577)
T PRK10649 356 QR--TQNAREY-DTNVLKPFSEVLAD--PAPKKFIIVHLLGTHI-----KYKYRYPENQ-GKFDDRTGHVPPGLNADELE 424 (577)
T ss_pred cc--cCCCCCc-HHHHHHHHHHHHhc--cCCCcEEEEEecCCCc-----chhhhCCHHH-hcCCCCCCcccccccchHHH
Confidence 00 0001122 44555556677754 3568899999999999 65 346665 4443211 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCC-CcccCCcceeeEE
Q psy12301 303 NRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVK-NTLWEGGVKVPAI 381 (632)
Q Consensus 303 ~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k-~~~~e~~~~VPli 381 (632)
..+.|+++|.++|..||+|++.|++.+ +||+|||+||||+...+. +.+ .+.|++ +..|++++|||||
T Consensus 425 ~~~~Y~nsI~y~D~~l~~ii~~Lk~~~--~nt~iiy~SDHGe~~~~~---------~~~-~~lG~~~~~~~~~~~~VP~i 492 (577)
T PRK10649 425 SYNDYDNANLYNDHVVASLIKDFKATD--PNGFLVYFSDHGEEVYDT---------PPH-KTQGRNEDNPTRHMYTIPFL 492 (577)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHhcCC--CCeEEEEECCCCcccccC---------Ccc-cccCCCCCCCCcccceecEE
Confidence 246899999999999999999999974 999999999999986321 111 123333 5788999999999
Q ss_pred EECCCCCC---C---CceecCccchhhHHHHHHHHhCCCCCCC
Q psy12301 382 LWSPQIQQ---N---PRVSLQMMHISDWLPTLYTAAGGDTSRL 418 (632)
Q Consensus 382 i~~P~~~~---~---g~~~~~~vs~~Di~PTll~l~Gi~~p~~ 418 (632)
||+++... + +..+++++|+.||+||+++++|++.+..
T Consensus 493 i~~s~~~~~~~~~~~~~~~~~~~s~~Dl~~Tll~laGi~~~~~ 535 (577)
T PRK10649 493 LWTSEKWQAAHPRDFSQDVDRKYSLAELIHTWSDLAGLSYDGY 535 (577)
T ss_pred EEECHHHHhhCchhhhhhhcCCeeHHhHHHHHHHHcCCCCCcC
Confidence 99854321 1 2346899999999999999999998765
No 11
>COG3083 Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only]
Probab=99.97 E-value=2.6e-29 Score=255.84 Aligned_cols=304 Identities=22% Similarity=0.272 Sum_probs=209.5
Q ss_pred hccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeecCC-CCccceeeeccCCCCCcCccCCCCCCCCC
Q psy12301 78 ALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQPV-CTPSRASLMTGKYPIHTGMQGPPIWGAEP 156 (632)
Q Consensus 78 ~~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~~~-~~Psr~sllTG~~p~~~g~~~~~~~~~~~ 156 (632)
+..||||+|.+|++|.|++. ...||+|..++++.+.|+|+|++.. +.-+..+|+-|..+.-. ....
T Consensus 257 a~~~NillI~vdglR~d~l~-----~~~MP~la~Fa~q~i~FtnHySsGN~t~~GlfGLFYGL~~~Y~---d~vl----- 323 (600)
T COG3083 257 AHGPNILLITVDGLRYDALD-----EKQMPNLADFANQNIRFTNHYSSGNSTQAGLFGLFYGLSATYW---DSVL----- 323 (600)
T ss_pred CCCCCEEEEEeccccccccC-----hhhChhHHHHHhhhcccccccCCCCccccchheeeccCChhHH---HHHH-----
Confidence 33789999999999999986 6789999999999999999999744 45677777777665321 1100
Q ss_pred CCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCc
Q psy12301 157 RGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNL 236 (632)
Q Consensus 157 ~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 236 (632)
.....+.|.+.|+++||+-+.++.. ||..- -|+....... .+.
T Consensus 324 --s~~t~p~Lie~L~qq~YQfglfss~--------------~F~sp---------lfrqalf~~l---------~~~--- 366 (600)
T COG3083 324 --SARTPPALIEALRQQNYQFGLFSSD--------------GFKSP---------LFRQALFSDL---------SLP--- 366 (600)
T ss_pred --hcCCchHHHHHHHhcCceEEeeccC--------------CCCCc---------hHHHHHhhhc---------Ccc---
Confidence 1124567999999999999888752 22211 0111111111 000
Q ss_pred ccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHH
Q psy12301 237 STAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDD 316 (632)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~ 316 (632)
.....+ -.++..++-...|++.+++++|||.|+.+..+|.-+. |-...+ ....+.++.|.+++.++|.
T Consensus 367 --~~~t~~-~~~~~~t~~~~wf~~~~~~d~PwFs~L~l~~~~~~~~--~~s~q~-------~~~~~~~~~Y~~a~~~vD~ 434 (600)
T COG3083 367 --ALVTQS-SDDERATQWLLWFGRYRDEDNPWFSYLSLNSSHANDD--PSSNQA-------KARPPFKNRYQNALREVDS 434 (600)
T ss_pred --ccccCC-chHHHHHHHHHHHHHhhccCCCceEEEEccccccccc--cccccc-------cccchHHHHHHHHHHHHHH
Confidence 000000 0233444545555566677899999999999998322 111111 1112357889999999999
Q ss_pred HHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceecC
Q psy12301 317 SVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQ 396 (632)
Q Consensus 317 ~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~~ 396 (632)
+||++++.|+++|.+|||+||+|||||+.+.+.. ..-|| +.....-..++|||+|+|||.. + ..++.
T Consensus 435 ~I~~vLe~L~~~~~L~NTvVIITs~HG~eFne~~----~~ywG-------~~t~ysr~qlqVPlvihwpg~~-~-~~v~~ 501 (600)
T COG3083 435 QIGRVLEQLRNSGLLDNTVVIITADHGEEFNEEE----QNYWG-------HGTNYSRYQLQVPLVIHWPGTP-A-GRVNH 501 (600)
T ss_pred HHHHHHHHHhhcccccceEEEEECCCCcccCccc----ccccc-------CCCccccceecccEEEEeCCCc-c-hhhcC
Confidence 9999999999999999999999999999994430 11122 3323333468999999999963 3 45589
Q ss_pred ccchhhHHHHHHH-HhCCCCCCCCCCcCCcccccccccCCCCCCCCCCCccccHHhhhcCCCCCCceeEEeecCCCCeeE
Q psy12301 397 MMHISDWLPTLYT-AAGGDTSRLPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLLNTPSRRNSVLINIDEKKRTAA 475 (632)
Q Consensus 397 ~vs~~Di~PTll~-l~Gi~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~sl~~~l~~~~~~~r~~~~~~~~~~~~~~a 475 (632)
+++++||+||++. ++|++.|.... -.|++|+. ....|+++.. ......+
T Consensus 502 lTsH~Dl~~tLMq~ll~V~np~~dY----------------------SqG~dLf~-----~~~~r~Wv~a---~d~~~~a 551 (600)
T COG3083 502 LTSHLDLMTTLMQRLLGVSNPPSDY----------------------SQGQDLFN-----ESRRRDWVLA---ADYRTLA 551 (600)
T ss_pred ccchhhhHHHHHHHHhcCCCChhhh----------------------hcccchhc-----cCcccceEEe---cccceEE
Confidence 9999999999997 99999876432 68999873 3344777764 2345678
Q ss_pred EEeCCcEEEEc
Q psy12301 476 VRLDSWKLVLG 486 (632)
Q Consensus 476 vr~~~~K~i~~ 486 (632)
+.+.+.+|+..
T Consensus 552 iit~~~tlv~~ 562 (600)
T COG3083 552 IITPKGTLVLD 562 (600)
T ss_pred EEcCCceEEec
Confidence 88888888765
No 12
>PRK11598 putative metal dependent hydrolase; Provisional
Probab=99.97 E-value=5e-30 Score=278.87 Aligned_cols=272 Identities=15% Similarity=0.152 Sum_probs=186.5
Q ss_pred cCc-eEEEEEEccCCccccCCCCCCCCCCcHHHHHHccc-ccceeeec-CCCCccceeeeccCCCCCcCccCCCCCCCCC
Q psy12301 80 TKS-TTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGI-ILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIWGAEP 156 (632)
Q Consensus 80 ~pN-IvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv-~F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~ 156 (632)
+|| ||+|+.|+.|++++++||+++.+||.|.+ +++ .|++++|+ +.|.+|.++|+|+..+.....
T Consensus 233 ~~~~vVlViGESaR~~~~slyGY~r~TtP~L~~---~~~~~F~~~~S~gt~T~~Svp~mfS~~~~~~y~~---------- 299 (545)
T PRK11598 233 RKNLTILVVGETSRAENFSLGGYPRETNPRLAK---DNVIYFPHTTSCGTATAVSVPCMFSNMPRKHYDE---------- 299 (545)
T ss_pred CCcEEEEEehhhHHHhhcCCCCCCCCCCccccc---cCceeecccccCccchHHHHHHHhcccccccccc----------
Confidence 566 78899999999999999999999999764 555 69999996 778899999999876643221
Q ss_pred CCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCc
Q psy12301 157 RGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNL 236 (632)
Q Consensus 157 ~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 236 (632)
.......+|.++|+++||+|.++... .|+...+.. ..... +....
T Consensus 300 -~~~~~~~~l~d~l~~aG~~t~W~~Nq-------------~g~~g~~~r-------~~~~~--------------~~~~~ 344 (545)
T PRK11598 300 -ELAHHQEGLLDIIQRAGINVLWNDND-------------GGCKGACDR-------VPHQD--------------VTALN 344 (545)
T ss_pred -hhhhhcccHHHHHHHcCCeEEeecCC-------------CCCcchhcc-------cchhh--------------hhhhc
Confidence 01123468999999999999887531 121100000 00000 00000
Q ss_pred ccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCC----------CChhHHH
Q psy12301 237 STAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYI----------TDPNRRT 306 (632)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~----------~~~~~~~ 306 (632)
.......+...|+.+.+...++|++. +++.|+++|++++|.|+.. -..|+++ .++... .+...+.
T Consensus 345 ~~~~~~~~~~~De~LL~~l~~~L~~~--~~~~fivLH~~GSH~P~Y~--~RyP~~~-~~F~p~~~~~~~~~~~~~~~~n~ 419 (545)
T PRK11598 345 LPGQCIDGECYDEVLFHGLENYINNL--QGDGVIVLHTIGSHGPTYY--NRYPPQF-RKFTPTCDTNEIQTCTQQQLVNT 419 (545)
T ss_pred cccccCCCCccHHHHHHHHHHHHHhc--CCCeEEEEeCCCCCCcchh--hcCChhh-ccCCCCCCccccccccHHHHHHH
Confidence 00011122345778888888888753 3468999999999994210 0344444 222211 1234678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCccc----CCcceeeEEE
Q psy12301 307 YAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLW----EGGVKVPAIL 382 (632)
Q Consensus 307 Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~----e~~~~VPlii 382 (632)
|+++|.++|..||++++.|++.+..+||+||++||||+.+.++ +.+ .++..| ++++||||||
T Consensus 420 YdnsI~ytD~~lg~ii~~Lk~~~~~~nT~iIy~SDHGe~lge~------------g~~--~hg~~y~~aP~~~~~VPlii 485 (545)
T PRK11598 420 YDNTILYVDYIVDKAINLLKQHQDKFNTSLVYLSDHGESLGEN------------GIY--LHGLPYAIAPDQQTHVPMLL 485 (545)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCCeEEEEECcCCCccccC------------Ccc--cCCCccccCccccccccEEE
Confidence 9999999999999999999999999999999999999998222 111 223333 7899999999
Q ss_pred ECCC-CCCC---------CceecCccchhhHHHHHHHHhCCCCCCC
Q psy12301 383 WSPQ-IQQN---------PRVSLQMMHISDWLPTLYTAAGGDTSRL 418 (632)
Q Consensus 383 ~~P~-~~~~---------g~~~~~~vs~~Di~PTll~l~Gi~~p~~ 418 (632)
|+++ ..+. +...+.++++.||+||+|+++|++.+..
T Consensus 486 w~s~~~~~~~~~~~~~l~~~~~~~~~s~ddl~~TlL~l~gI~t~~y 531 (545)
T PRK11598 486 WLSPDYQKRYGVDQQCLQKQAQTQDYSQDNLFSTLLGLTGVQTKEY 531 (545)
T ss_pred EECcchhccccchhhhhhhhccCCceeHHhHHHHHHHHhCCCCCCC
Confidence 8654 3221 1223568999999999999999998764
No 13
>PRK11560 phosphoethanolamine transferase; Provisional
Probab=99.96 E-value=1.2e-28 Score=267.82 Aligned_cols=270 Identities=13% Similarity=0.173 Sum_probs=181.5
Q ss_pred ccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccc-cceeeec-CCCCccceeeeccCCCCCcCccCCCCCCCCC
Q psy12301 79 LTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGII-LNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIWGAEP 156 (632)
Q Consensus 79 ~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~-F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~ 156 (632)
.++|||+|+.|+.|++++++||+++.+||+|++ ++++. |++ +++ +.|..|..+|+++.....-- .
T Consensus 246 ~~~~vVlViGESaRad~~slyGY~r~TtP~L~~--~~~~~~f~~-~S~gt~T~~Slp~mfs~~~~~~~~--~-------- 312 (558)
T PRK11560 246 DDTYVVFIIGETTRWDHMGILGYERNTTPKLAQ--EKNLAAFRG-YSCDTATKLSLRCMFVREGGAEDN--P-------- 312 (558)
T ss_pred CCCEEEEEEEcccCHhhcccCCCCCCCCcchHh--cCCEEEecC-ccCCccchhhhHHHhcCCCccccc--h--------
Confidence 356899999999999999999999999999997 35665 555 775 67778999998875432100 0
Q ss_pred CCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCc
Q psy12301 157 RGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNL 236 (632)
Q Consensus 157 ~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 236 (632)
.......+|.++|+++||+|.+++.....+. . .+.|.+...- .... .
T Consensus 313 -~~~~~~~nlld~l~~aGy~t~w~SnQ~~~w~-~----n~~~~~~~~~-----~~~~---------------------~- 359 (558)
T PRK11560 313 -QRTLKEQNVFAVLKQLGFSSELFAMQSEMWF-Y----NNTMADNYAY-----REQI---------------------G- 359 (558)
T ss_pred -hhhcccCCHHHHHHHCCCcEEEeecccceee-e----cCcccccchh-----hhhc---------------------c-
Confidence 0011356899999999999999874211000 0 0011111100 0000 0
Q ss_pred ccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCC--CChHHHhhcCCC---------CChhHH
Q psy12301 237 STAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLE--APQETINQFQYI---------TDPNRR 305 (632)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~--~p~~~~~~~~~~---------~~~~~~ 305 (632)
...........|+.+.+...++|++..+ +++|+++|+.++|. +|. .|+++ ++|.+. .+...+
T Consensus 360 ~~~~~~g~~~~D~~LL~~l~~~L~~~~~-~~~~ivLH~~GSH~-----~Y~~RyP~~f-~~F~p~~~~~~~~c~~~~~~n 432 (558)
T PRK11560 360 AEPRNRGKPVDDMLLVDEMKQSLGRNPD-GKHLIILHTKGSHY-----NYTQRYPRSF-ARYQPECIGVDSGCSKAQLIN 432 (558)
T ss_pred cccCCCCCCcChHHHHHHHHHHHHhcCC-CCeEEEEeccCCCc-----ChhhcCCHhh-hccCCcCCCcccccchHHHHH
Confidence 0000011223477788888888886433 34677999999999 553 34433 333321 123457
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccC-CcceeeEEEEC
Q psy12301 306 TYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWE-GGVKVPAILWS 384 (632)
Q Consensus 306 ~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e-~~~~VPlii~~ 384 (632)
.|+++|.++|..||++++.|++ +||+|||+||||+.+ | .++.+.|.+...++ +++|||||||+
T Consensus 433 ~YdnsI~ytD~~lg~ii~~Lk~----~nTivIy~SDHGe~l-g-----------e~~~lhg~~~~~~~~~~~~VPliv~~ 496 (558)
T PRK11560 433 SYDNSVLYVDHFISSVIDQLRD----KKAIVFYAADHGESI-N-----------EREHLHGTPREMAPPEQFRVPMMVWM 496 (558)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----cCeEEEEEcCCCCcC-C-----------CCcccCCCCcccCCccCeeeCEEEEE
Confidence 8999999999999999999997 699999999999997 2 22234455554444 89999999998
Q ss_pred CCC-------------CCCCceecCccchhhHHHHHHHHhCCCCCC
Q psy12301 385 PQI-------------QQNPRVSLQMMHISDWLPTLYTAAGGDTSR 417 (632)
Q Consensus 385 P~~-------------~~~g~~~~~~vs~~Di~PTll~l~Gi~~p~ 417 (632)
++. .+++++.+.++|+.||+||||+++|++.|.
T Consensus 497 s~~~~~~p~~~~~~~~l~~~~~~~~~~s~~dlf~TlL~~~gv~~p~ 542 (558)
T PRK11560 497 SDKYLANPDNAQAFAQLKKQADMKVPRRHVELFDTILGCLGYTSPD 542 (558)
T ss_pred ccccccCCccchhHHHhccccccCCceeehhHHHHHHHHcCCCCCh
Confidence 432 123345578999999999999999999753
No 14
>COG1368 MdoB Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=1.9e-23 Score=235.46 Aligned_cols=288 Identities=20% Similarity=0.262 Sum_probs=207.5
Q ss_pred hccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcc--cccceeeec-CC-CCccceeee-ccCCCCCcCccCCCCC
Q psy12301 78 ALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNG--IILNNMYAQ-PV-CTPSRASLM-TGKYPIHTGMQGPPIW 152 (632)
Q Consensus 78 ~~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~G--v~F~n~ys~-~~-~~Psr~sll-TG~~p~~~g~~~~~~~ 152 (632)
+..||||+|++|++..-.+..-......||+|++|++++ ..|+|++.+ .. ++....+++ +..++...|..-..
T Consensus 259 ~~~~nvIvi~lES~~~~~~~~~~~g~~vtP~ln~l~~~~~s~~f~~ff~~~~~~~~~~ae~~~~~s~~~~~~~~~~~~-- 336 (650)
T COG1368 259 AKGPNVIVIQLESFQGFLINPKVNGIEVTPNLNKLQKGGVSLLFSNFFGGVTAGSTFDAETGVLSSLFPAARGSVFQT-- 336 (650)
T ss_pred cCCCcEEEEEeccccchheeccccCCCCCCcHHHHhccCchhHHHHHHhhcCCCCcccchhhhccCCCCCccCceeee--
Confidence 557999999999997555554455588999999999997 888998874 33 333333333 45566555443211
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCcccccccccccccccccc
Q psy12301 153 GAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDM 232 (632)
Q Consensus 153 ~~~~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 232 (632)
.+.. ...+|+.+|++.||+|++++.+.-++++....-...|||.+++ ...|+....
T Consensus 337 ----~~~~-~~~slp~iLk~~GY~t~a~hg~~~~fwNr~~~yk~~Gfd~f~~-----~~~~~~~~~-------------- 392 (650)
T COG1368 337 ----YGDN-KYSSLPAILKQQGYKTAALHGGDGSFWNRKSFYKIFGFDDFFD-----LESFDGNAD-------------- 392 (650)
T ss_pred ----cCCC-CcccHHHHHhcCCceEEEEeCCCcceecHHHHHHhcChhhccc-----hhhcCCCcc--------------
Confidence 1112 3679999999999999999998888877777777889998876 111111000
Q ss_pred ccCcccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHh-hcCC--CCChhHHHHHH
Q psy12301 233 RRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETIN-QFQY--ITDPNRRTYAA 309 (632)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~-~~~~--~~~~~~~~Y~~ 309 (632)
........|+.+.+++++.+++. ++|||.++.+...|. ||..|++..+ .+.. ......+.|.+
T Consensus 393 -------~~~~~G~sD~~l~~~~~~~l~~~--~~Pfy~~~iTlsnH~-----Pf~~~~~~~~~~~~~~~~~~~~l~~y~~ 458 (650)
T COG1368 393 -------SEIGWGLSDKDLFKESLPLLKKL--KKPFFSFVITLSNHG-----PFELPEGKRNELLEEPLSASTALANYLQ 458 (650)
T ss_pred -------cccCCCCchHHHHHHHHHHHHhc--CCChHheEEeccCCC-----CCCCChhhhcccccccCcCcccccchhh
Confidence 01112356778889999999974 469999999999999 8888876553 2211 11225678999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCC
Q psy12301 310 MVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQ 389 (632)
Q Consensus 310 ~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~ 389 (632)
.++|.|+++|++++.|+++|+++||+||++|||.....+. . .......+. .......-+||++|+.|+...
T Consensus 459 ~~~y~D~al~~F~~~lkk~~~~~~sviv~~GDH~~~~~~~-----~---~~~~~~~~~-~~~~~~~~~vP~~i~~~g~~~ 529 (650)
T COG1368 459 AVHYADEALGQFIDKLKKSGLYKNSVIVLYGDHYGISGNQ-----N---LAMPKFLGK-SYDIDMLQRVPLLIHAPGIKN 529 (650)
T ss_pred hhhhHHHHHHHHHHHHHhcCCCCCcEEEEECCCCCcchhh-----h---hhhhhhccc-ccchhHHhcCCeEEEcCCCCc
Confidence 9999999999999999999999999999999999876332 0 000111222 233444568999999999865
Q ss_pred CCceecCccchhhHHHHHHHHhCCCC
Q psy12301 390 NPRVSLQMMHISDWLPTLYTAAGGDT 415 (632)
Q Consensus 390 ~g~~~~~~vs~~Di~PTll~l~Gi~~ 415 (632)
+ ...+...+++||+||+++++||+.
T Consensus 530 ~-~~~~~~~~qidi~pTil~l~gi~~ 554 (650)
T COG1368 530 K-KKIDTVGGQLDIAPTILGLLGIST 554 (650)
T ss_pred c-ccccccccccchhhHHHHHcCCCC
Confidence 4 456888999999999999999984
No 15
>COG2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]
Probab=99.82 E-value=1.2e-19 Score=196.61 Aligned_cols=275 Identities=19% Similarity=0.219 Sum_probs=180.6
Q ss_pred ccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeec-CCCCccceeeeccCCCCCcCccCCCCCCCCCC
Q psy12301 79 LTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIWGAEPR 157 (632)
Q Consensus 79 ~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~-~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~~ 157 (632)
+..++|+|+.|+.|+++++.||+++.+||.|+++.++=+.|.|++|+ +.|..|..+|++- ++..+.- .
T Consensus 230 ~~~~~VLVIGESaR~~n~~L~GY~R~TtP~L~~~~~~~~~f~~~~Scgt~Ta~Slpcmfs~-~~r~~~~----------~ 298 (555)
T COG2194 230 KPRTVVLVIGESARRDNMSLYGYPRETTPFLAKLRGPLTVFFNAYSCGTATALSLPCMFSR-DPRENYS----------E 298 (555)
T ss_pred CCcEEEEEEechhhHhhccccCCCCCCChhHHhccCCceeeccccccccceeeeehhhccc-Cchhccc----------c
Confidence 35689999999999999999999999999888765544779999995 8888999999884 2222210 1
Q ss_pred CCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCcc
Q psy12301 158 GVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLS 237 (632)
Q Consensus 158 ~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (632)
........|.++|+++||+|.++.+...+.......+.. +..+. ...
T Consensus 299 ~~~~~~~Nl~dilkrAG~~t~W~~nq~~~k~~~~~~~~~--------------~~~d~-------------------~~~ 345 (555)
T COG2194 299 QKALHQDNLLDLLKRAGYKTFWISNQTGCKGVTDRIPIA--------------NRADE-------------------NYF 345 (555)
T ss_pred ccccccccHHHHHHHcCCeEEeeccCcccccchhhchhh--------------hhhhh-------------------hcc
Confidence 123356789999999999999997641111000000000 00000 000
Q ss_pred cc-cCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCC----------CChhHHH
Q psy12301 238 TA-WDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYI----------TDPNRRT 306 (632)
Q Consensus 238 ~~-~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~----------~~~~~~~ 306 (632)
.. ....+.-.|+.+.....+.+..+ ..+.-|+++|+.+.|. .. -...|+++. +|.+. .+...+.
T Consensus 346 ~~~~~~~~~~~De~LL~~~~~~l~~~-~~~~~~IVLH~~GSHp-~Y--~~Ryp~~~~-kF~p~c~~~~~~~c~~~~lvN~ 420 (555)
T COG2194 346 LKGYCNGGNCYDEALLPDLDQVLAQE-LSQKKLIVLHLMGSHP-NY--YDRYPKEFA-KFTPTCDTNDISSCSQEQLVNC 420 (555)
T ss_pred ccccccCcccchHHHhHhHHHHhhcc-CCCCeEEEEEccCCCc-cH--hhhCCHHHh-ccCCCCCccccccCcHHHHHHh
Confidence 00 11223345666666666777642 2345799999999994 21 112444433 23221 1245689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcc-cC-CCCcccCCcceeeEEEEC
Q psy12301 307 YAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPY-RG-VKNTLWEGGVKVPAILWS 384 (632)
Q Consensus 307 Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~-~g-~k~~~~e~~~~VPlii~~ 384 (632)
|+++|.|+|+.|.++++.||++. ++|.+|++||||+++.+ ++++ .| ......++.+|||||+|.
T Consensus 421 YDNtilYtD~~L~~vi~~Lk~~~--~~~~liY~SDHGEslgE------------n~~ylhg~p~~~ap~~q~~VP~i~w~ 486 (555)
T COG2194 421 YDNTILYTDYFLSKLIDQLKDKK--DNTSLIYFSDHGESLGE------------NGPYLHGTPYEIAPQEQYHVPFIVWS 486 (555)
T ss_pred hhchhhhhHHHHHHHHHHHHhCC--CCeEEEEEcCccHhhcc------------CCcccccCcccCCchhheeeeEEEEE
Confidence 99999999999999999999988 59999999999999822 2221 11 111255889999999997
Q ss_pred CCCC--CCC----------ceecCccchhhHHHHHHHHhCCCCC
Q psy12301 385 PQIQ--QNP----------RVSLQMMHISDWLPTLYTAAGGDTS 416 (632)
Q Consensus 385 P~~~--~~g----------~~~~~~vs~~Di~PTll~l~Gi~~p 416 (632)
.... +.+ .......++.+++-|++.+.++..+
T Consensus 487 S~~~~~~~~~~~~~~c~~~~~~~~~~~~d~lf~s~lg~~~~~~~ 530 (555)
T COG2194 487 SDKFQQKHPRQKDLRCLNYFAQELSYSHDNLFHSLLGVSGVKTG 530 (555)
T ss_pred ChHHHhhhhhhhHHHHHHHhhhccchhHHHhHhhccCccccccc
Confidence 7421 111 0111225789999999998888764
No 16
>PRK05362 phosphopentomutase; Provisional
Probab=99.77 E-value=9.1e-18 Score=174.49 Aligned_cols=178 Identities=15% Similarity=0.183 Sum_probs=129.8
Q ss_pred CCCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccC
Q psy12301 156 PRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRN 235 (632)
Q Consensus 156 ~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 235 (632)
...+++..+|+.+.|+++||+|..|||-.- .....|++....
T Consensus 216 d~~~~p~~~Tl~d~L~~aG~~v~~VGki~D-------iFa~~G~t~~~~------------------------------- 257 (394)
T PRK05362 216 DYALKPPAPTVLDKLKEAGGEVIAVGKIAD-------IFAGQGITEKVK------------------------------- 257 (394)
T ss_pred CcCcCCCCCCHHHHHHHCCCeEEEEEehhh-------cccCCCcccccC-------------------------------
Confidence 345677789999999999999999998321 111234432210
Q ss_pred cccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHH
Q psy12301 236 LSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLD 315 (632)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D 315 (632)
.......++++++.|++ .++++|+++++.+.+.- +.+. .....|.++|+.+|
T Consensus 258 ---------~~~~~~~~~~ale~L~~--~~~~~fvfvn~~~~D~~---------------~GH~--~~~~~y~~ale~~D 309 (394)
T PRK05362 258 ---------TKSNMDGMDATIEEMKE--AGDNGLVFTNLVDFDSL---------------YGHR--RDVAGYAAALEEFD 309 (394)
T ss_pred ---------CCCHHHHHHHHHHHHHh--CCCCcEEEEecccCccc---------------cCCc--CCHHHHHHHHHHHH
Confidence 01224556888888874 25789999999988761 1121 12367999999999
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceec
Q psy12301 316 DSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSL 395 (632)
Q Consensus 316 ~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~ 395 (632)
++||+|++.|+ +||+||||||||... +. .+... ...+|||||++|+.. +...+
T Consensus 310 ~~lg~ll~~L~-----~~tlliiTaDHG~d~-t~---------------~gt~H----T~e~VPlIi~gp~v~--~~~l~ 362 (394)
T PRK05362 310 ARLPELLAALK-----EDDLLIITADHGNDP-TW---------------PGTDH----TREYVPLLVYGPKFK--GGSLG 362 (394)
T ss_pred HHHHHHHHHhc-----cCCEEEEeCCCCCCC-CC---------------CCCCC----CCCceeEEEEECCCC--ccEEC
Confidence 99999999997 489999999999743 10 01111 136999999999964 45678
Q ss_pred CccchhhHHHHHHHHhCCCCCCCCCCcCCcccccccccCCCCCCCCCCCccccHHhh
Q psy12301 396 QMMHISDWLPTLYTAAGGDTSRLPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSL 452 (632)
Q Consensus 396 ~~vs~~Di~PTll~l~Gi~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~sl~~~l 452 (632)
..++++||+|||++++|++.| .+|+||++.|
T Consensus 363 ~~~sl~DI~pTia~l~Gv~~P--------------------------~~G~Sfl~~l 393 (394)
T PRK05362 363 HRETFADIGATIADNFGVEPM--------------------------EYGKSFLDEL 393 (394)
T ss_pred CCCEehhHHHHHHHHcCcCCC--------------------------CCCCcHHHhh
Confidence 889999999999999999853 4799999876
No 17
>cd00016 alkPPc Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity.
Probab=99.74 E-value=5.2e-17 Score=170.48 Aligned_cols=301 Identities=15% Similarity=0.155 Sum_probs=181.9
Q ss_pred cCceEEEEEEccCCccccCCC---CCC----CCCCcHHHHHHcccccceeeec--CCCCccceeeeccCCCCCc--CccC
Q psy12301 80 TKSTTLTLLIVYGWNDLSFHG---SNE----IPTPNIDALAYNGIILNNMYAQ--PVCTPSRASLMTGKYPIHT--GMQG 148 (632)
Q Consensus 80 ~pNIvlI~~D~~r~d~l~~~G---~~~----~~TPnld~La~~Gv~F~n~ys~--~~~~Psr~sllTG~~p~~~--g~~~ 148 (632)
.+||||++.|++++..+++.. ... ..++++++|...|+.++.+..+ +-|.++.++++||..+.+. |+..
T Consensus 6 ~kNVIl~igDGmg~~~~taar~~~~~~~~~~~~~l~~d~~~~~G~~~T~~~~~~vtDSAa~aTA~~tG~Kt~~~~igv~~ 85 (384)
T cd00016 6 AKNVILFIGDGMGVSTITAARIYKGQENGAEEGKLLFDDFPLTGLSKTYSVDSQVTDSAATATAYATGVKTNNGAIGVSA 85 (384)
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHhcCcccccccccchhccchhheeecccCCCCccccHHHHhHhhhcccccCceeeecC
Confidence 589999999999998887653 222 4679999999999999865542 5788999999999998763 3332
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHhcCCceeecccCcCCCC---CCCCCC-----------------CCCCCCccccccCC
Q psy12301 149 PPIWGAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFF---RREYTP-----------------LYRGFESHFGYLNG 208 (632)
Q Consensus 149 ~~~~~~~~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~---~~~~~~-----------------~~~GFd~~~g~~~~ 208 (632)
.... .....+....||.+++|++||.|+.|.+..+... ...... ..+++|...| |
T Consensus 86 ~~~~--~~~~~~~~~~ti~e~ak~~G~~tGiVtT~~ithATPAa~~AH~~~R~~~~~Ia~q~~~~~~g~~~dv~~G---G 160 (384)
T cd00016 86 DVSR--DDTDNGKPVTSVLEWAKAAGKATGIVTTTRVTHATPAAFYAHVPDRNWEEDIAEQLIEEAPGRGIDVLLG---G 160 (384)
T ss_pred CCCc--ccccCCcchhhHHHHHHHcCCCEEEEeeeecCCCcchhhhccccccCCHHHHHHHHhhccCCCCCeEEEe---C
Confidence 2111 1123445688999999999999999987433221 000000 1225665443 3
Q ss_pred ccCCCCcccc---ccccc----ccccccccccc----------------------CcccccCC----CCccchhHHHHHH
Q psy12301 209 VISYYDHILS---DQYSR----TVELNGHDMRR----------------------NLSTAWDT----VGEYATDLFTKEA 255 (632)
Q Consensus 209 ~~~~~~~~~~---~~~~~----~~~~~g~~~~~----------------------~~~~~~~~----~~~~~~~~~~~~a 255 (632)
...+|..... +...+ .....|+.... ........ ...-.-..+++.+
T Consensus 161 G~~~f~~~~~~g~r~d~~~l~~~~~~~gy~~v~~~~~l~~~~~~~~k~lglF~~~~l~~~~~r~~~~~~~psL~emt~~a 240 (384)
T cd00016 161 GRRYFLPSTTGGGRKDGRDLIAEWKAKGYQYVWNRTELLAVNVATDKLLGLFADSHLPYELDRDPFGKGEPSLAEMTEKA 240 (384)
T ss_pred ChhhccccCCccccccchHHHHHHHHcCCEEECCHHHHhhccccCCcEEEEeCCCCCChhhccCccccCCCCHHHHHHHH
Confidence 3333332110 00000 00000111000 00000000 1122346678999
Q ss_pred HHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEE
Q psy12301 256 VQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSI 335 (632)
Q Consensus 256 ~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTl 335 (632)
+++|++. .++||+++....+|. .-.. . ....|...+..+|++|+.+++.++. .+||+
T Consensus 241 l~~L~~~--~~gFfl~ve~~~iD~-----~gH~-----------~--d~~~~~~~l~~~D~av~~~l~~l~~---~~dTL 297 (384)
T cd00016 241 IDVLSKN--PNGFFLMVEGGRIDH-----AHHA-----------N--DAAGALSETLAFDDAVEAALDFAKK---DGDTL 297 (384)
T ss_pred HHHHHhc--CCcEEEEEeCCCCCc-----ccCC-----------C--cHHHHHHHHHHHHHHHHHHHHHhhC---CCCeE
Confidence 9999752 479999999988887 2111 1 1235888899999999999999982 48999
Q ss_pred EEEEccCCCCCC--CcccccCcCCCCC---------CCcccC---CCCcccCCcceeeEEEECCCCCCCCceecCccchh
Q psy12301 336 IIFMSDNGAPTV--EYRETSNYRNWGS---------NYPYRG---VKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHIS 401 (632)
Q Consensus 336 II~tSDHG~~~~--g~~~~~~~~~~g~---------~~~~~g---~k~~~~e~~~~VPlii~~P~~~~~g~~~~~~vs~~ 401 (632)
||+|||||.... +...+. ....+. ..++.. ...+--..+.-||++.++|+.. .......+.
T Consensus 298 iIvTADHg~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~Htg~~Vpv~a~Gp~a~----~f~g~~ent 372 (384)
T cd00016 298 VVVTADHSHGGTILGYAGRG-NPILGLADAPELDVDGLPYTTLTYANTTGTHGGEDVPVFAYGPGSH----LFRGVMENT 372 (384)
T ss_pred EEEECCCCCCccccCCCCCC-CcccccccccccccCCCCceEEEecCCCCCCcCceeeEEeecCCcc----ccCcceecH
Confidence 999999998651 110000 000000 000000 0011122356799999999853 345778899
Q ss_pred hHHHHHHHHhCC
Q psy12301 402 DWLPTLYTAAGG 413 (632)
Q Consensus 402 Di~PTll~l~Gi 413 (632)
||++.|+.++++
T Consensus 373 ~I~~~i~~al~~ 384 (384)
T cd00016 373 EIAHVMAYALGL 384 (384)
T ss_pred HHHHHHHHHhcC
Confidence 999999999875
No 18
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=99.69 E-value=8.9e-16 Score=163.36 Aligned_cols=133 Identities=15% Similarity=0.134 Sum_probs=96.9
Q ss_pred CccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHH
Q psy12301 244 GEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVIS 323 (632)
Q Consensus 244 ~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~ 323 (632)
....+..++++++++|++ ++|+|+++++..+... .+.. ....|..+|+.+|++||+|++
T Consensus 362 PeMsa~evtd~~i~~I~~---~k~dfi~vnfan~Dmv----------------GHtg--~~~a~v~AIE~vD~~LGrIl~ 420 (501)
T TIGR01307 362 PEMSAKAVTDAVLEAIAQ---GKFDLIVVNFANPDMV----------------GHTG--NFEAAIKAVEALDVCLGRIVE 420 (501)
T ss_pred CccCHHHHHHHHHHHHhc---cCCCEEEEECCCcccc----------------cCCC--CHHHHHHHHHHHHHHHHHHHH
Confidence 345678899999999986 6799999999776551 1111 124689999999999999999
Q ss_pred HHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceecCccchhhH
Q psy12301 324 ALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHISDW 403 (632)
Q Consensus 324 ~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~~~vs~~Di 403 (632)
+|++.|. +||||||||...... ..++ +......+.+|||||++|+..+ .....++++||
T Consensus 421 aLke~G~----~VIiTADHGnae~m~---------d~~g-----~p~t~HT~~~VP~Ii~~p~~i~---~~~~~~sL~DI 479 (501)
T TIGR01307 421 ACKKVGG----TLFLTADHGNAEEMI---------DENG-----NPHTAHTTNPVPFVCVGAKNVK---LIREGGVLADI 479 (501)
T ss_pred HHHhCCC----EEEEEcCCCChhhcc---------CCCC-----CcccCCCCeEeeEEEEECCccc---ccCCCceEhHH
Confidence 9999875 699999999642000 0000 0111234689999999996432 12455789999
Q ss_pred HHHHHHHhCCCCCCC
Q psy12301 404 LPTLYTAAGGDTSRL 418 (632)
Q Consensus 404 ~PTll~l~Gi~~p~~ 418 (632)
+||||+++|++.|..
T Consensus 480 aPTiLdL~Gi~~P~e 494 (501)
T TIGR01307 480 APTILDLMGLEQPAE 494 (501)
T ss_pred HHHHHHHhCcCCCCC
Confidence 999999999998754
No 19
>PRK12383 putative mutase; Provisional
Probab=99.65 E-value=4.2e-15 Score=154.56 Aligned_cols=177 Identities=16% Similarity=0.115 Sum_probs=124.2
Q ss_pred CCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCc
Q psy12301 157 RGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNL 236 (632)
Q Consensus 157 ~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 236 (632)
.++.+. ++++..++++|+++++|||...-+ ...|...+.
T Consensus 228 y~~~p~-~~v~~~l~~~G~~v~~VGKi~Di~-------s~~G~t~~~--------------------------------- 266 (406)
T PRK12383 228 YGVDPK-VQVPQKLYEAGVPVVLVGKVADIV-------NNPYGVSWQ--------------------------------- 266 (406)
T ss_pred CCCCCc-chhhhHHHHcCCCEEEEEEhHHee-------ccCCccccc---------------------------------
Confidence 346666 899999999999999999843111 011111110
Q ss_pred ccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHH
Q psy12301 237 STAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDD 316 (632)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~ 316 (632)
....++...+.+++.|++ ..+-|+|+++.++.. +.+.. ....|.++|+.+|+
T Consensus 267 -------~~~~t~~~~~~~l~aL~~---~~~dlvfvnl~~~D~----------------~GH~~--d~~~y~~aiE~iD~ 318 (406)
T PRK12383 267 -------NLVDTQRVMDITLDEFNT---HPTAFICTNIQETDL----------------AGHAE--DVARYAERLEVVDR 318 (406)
T ss_pred -------ccCCHHHHHHHHHHHHhc---CCCCEEEEeccCCcc----------------ccccC--CHHHHHHHHHHHHH
Confidence 012234556778888874 234588998888875 22222 23679999999999
Q ss_pred HHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceecC
Q psy12301 317 SVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQ 396 (632)
Q Consensus 317 ~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~~ 396 (632)
.|++|++.|+ ++|+||||||||...... + +.+ ...+|||||++|+..+ . ....
T Consensus 319 ~lg~ll~~L~-----~~~lliITaDHG~d~~~~-----------------~--t~H-Tre~VPlLi~gp~i~~-~-~lg~ 371 (406)
T PRK12383 319 NLARLLEAMT-----PDDCLVVMADHGNDPTIG-----------------H--SHH-TREVVPLLVYQKGLQA-T-QLGV 371 (406)
T ss_pred HHHHHHHHhc-----cCCEEEEEcCCCCCCCCC-----------------C--cCC-CCcceEEEEEECCccc-c-cCCC
Confidence 9999999997 589999999999843110 0 001 1358999999999643 2 2356
Q ss_pred ccchhhHHHHHHHHhCCCCCCCCCCcCCcccccccccCCCCCCCCCCCccccHHhhhcC
Q psy12301 397 MMHISDWLPTLYTAAGGDTSRLPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLLN 455 (632)
Q Consensus 397 ~vs~~Di~PTll~l~Gi~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~sl~~~l~~~ 455 (632)
.+++.||+|||++++|++.| .+|+||++.|.+.
T Consensus 372 ~~slaDIapTIl~~~Gv~~p--------------------------~~G~Sfl~~L~~~ 404 (406)
T PRK12383 372 RTTLSDVGATVCEFFGAPPP--------------------------QNGRSFLSSLRFA 404 (406)
T ss_pred CcEEhhHHHHHHHHcCCCCC--------------------------CCCCcHHHHhhcc
Confidence 68999999999999999854 5799999998754
No 20
>TIGR01696 deoB phosphopentomutase. This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli and Bacillus. This model matches pfam01676 for Metalloenzyme superfamily.
Probab=99.61 E-value=1.8e-14 Score=148.36 Aligned_cols=168 Identities=15% Similarity=0.173 Sum_probs=118.1
Q ss_pred CCCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccC
Q psy12301 156 PRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRN 235 (632)
Q Consensus 156 ~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 235 (632)
...+++..+|+.+.|+++|+.+..|||..--+ ...|.....
T Consensus 209 dy~~~p~~pTvld~l~~aG~~V~~VGki~DiF-------~g~Glt~a~-------------------------------- 249 (381)
T TIGR01696 209 DYALKPFAPTVLQKLKDEGHDVISIGKIADIY-------DGEGITKKV-------------------------------- 249 (381)
T ss_pred CCCCCCCCCCHHHHHHHCCCeEEEEccHHhEe-------cCCCccccc--------------------------------
Confidence 34567778999999999999999999842111 112222111
Q ss_pred cccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHH
Q psy12301 236 LSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLD 315 (632)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D 315 (632)
.........+.+++.|++ +.+-|+++++.++..- +.+.. ....|..+|+.+|
T Consensus 250 --------~~~~~~~~~~~~l~aL~~---~~~~lif~nl~d~D~~---------------~GH~~--d~~~y~~ale~vD 301 (381)
T TIGR01696 250 --------RTTSNMDGMDATIKEMKE---DFTGISFTNLVDFDAL---------------WGHRR--DVAGYAAALELFD 301 (381)
T ss_pred --------CCCCHHHHHHHHHHHHhc---CCCCEEEEEeCCCccc---------------cCCCC--CHHHHHHHHHHHH
Confidence 012234456778888874 2345888888887741 12221 3566999999999
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceec
Q psy12301 316 DSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSL 395 (632)
Q Consensus 316 ~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~ 395 (632)
++||+|++.|+ +||+||||||||..... .+...+ .-+|||||++|+. +++....
T Consensus 302 ~~Lg~ll~~L~-----~~tllIITADHG~Dp~~----------------~~t~HT----re~VPlIi~gp~i-~~g~~l~ 355 (381)
T TIGR01696 302 RRLPELFSLLR-----EDDLLIITADHGNDPTW----------------TGTDHT----REYIPVLVYSPKV-KPGHSLG 355 (381)
T ss_pred HHHHHHHHHhc-----cCCEEEEECCCCCCCCC----------------CCCcCC----CCCEeEEEEECCC-CCCceeC
Confidence 99999999997 68999999999993200 001111 2399999999995 4555668
Q ss_pred CccchhhHHHHHHHHhCCCCC
Q psy12301 396 QMMHISDWLPTLYTAAGGDTS 416 (632)
Q Consensus 396 ~~vs~~Di~PTll~l~Gi~~p 416 (632)
..+++.||+|||++++|++.|
T Consensus 356 ~~~slaDIapTIldllGv~~p 376 (381)
T TIGR01696 356 HRETFADIGATIADNFGTSDP 376 (381)
T ss_pred CCCEehhHHHHHHHHcCcCCC
Confidence 889999999999999999864
No 21
>TIGR02335 hydr_PhnA phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.
Probab=99.60 E-value=5.7e-15 Score=156.95 Aligned_cols=108 Identities=18% Similarity=0.159 Sum_probs=83.4
Q ss_pred hhhhhhccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeee--cCCCCccceeeeccCCCCCcCccCCC
Q psy12301 73 RRTYAALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYA--QPVCTPSRASLMTGKYPIHTGMQGPP 150 (632)
Q Consensus 73 ~~~~a~~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys--~~~~~Psr~sllTG~~p~~~g~~~~~ 150 (632)
-+.|+-.+..||+|++|+++++.+...-. ...+|||.+|+++|+... ..+ ++.|.|+++||+||.+|..||+.+|.
T Consensus 5 ~~~~~~~~~~vvvi~vDGl~~~~l~~~~~-~g~~P~L~~l~~~G~~~~-~~s~~Ps~T~p~~tSi~TG~~P~~HGI~gn~ 82 (408)
T TIGR02335 5 GRSYALPQRPTVVICVDGCDPEYINRGIA-DGVAPFIAELTGFGTVLT-ADCVVPSFTNPNNLSIVTGAPPAVHGICGNY 82 (408)
T ss_pred CceecCCCCCEEEEEeCCCCHHHHHhhhh-cCCCchHHHHHhcCceee-ccCCCCCcccccceeeecCCChhhCceecce
Confidence 35677778899999999999998864311 246999999999998654 333 36677999999999999999999986
Q ss_pred CCCCCCC-------CCCCCCCcHHHHHHhcCCceeeccc
Q psy12301 151 IWGAEPR-------GVPLTERFLPEYLRELGYSTKAIGK 182 (632)
Q Consensus 151 ~~~~~~~-------~l~~~~~tl~~~Lk~~GY~T~~igk 182 (632)
....... .--...+||.+.++++|.+|+.++.
T Consensus 83 ~~dp~~~~~~~~~~~~~~~~pTi~e~a~~aG~~ta~v~~ 121 (408)
T TIGR02335 83 YLDQDTGEEIMMTDAKYLRAPTILGEMSKAGVLTAVVTA 121 (408)
T ss_pred EEecCCCceEEEeChhhhCCchHHHHHHHcCCeEEEEec
Confidence 5443211 0113568999999999999999863
No 22
>PRK05434 phosphoglyceromutase; Provisional
Probab=99.57 E-value=5.2e-14 Score=151.21 Aligned_cols=129 Identities=19% Similarity=0.188 Sum_probs=94.4
Q ss_pred chhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q psy12301 247 ATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQ 326 (632)
Q Consensus 247 ~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~ 326 (632)
.....++.++++|++ +++.|+++++..+... .+..+ ...|..+|+.+|.+||+|+++|+
T Consensus 371 s~~e~~d~~i~~l~~---~~~Dfv~vnf~~~D~v----------------GHtg~--~~a~~~AIe~vD~~LGrll~aLk 429 (507)
T PRK05434 371 SAYEVTDKLVEAIES---GKYDFIILNFANPDMV----------------GHTGN--LEAAVKAVEAVDECLGRVVDAVL 429 (507)
T ss_pred cHHHHHHHHHHHHhc---cCCCEEEEEecCcchh----------------hcCCC--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 445578899999984 5688999999988661 12121 34688999999999999999999
Q ss_pred HcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceecCccchhhHHHH
Q psy12301 327 RKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHISDWLPT 406 (632)
Q Consensus 327 ~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~~~vs~~Di~PT 406 (632)
+.|. +||||||||....-. . .+. .+........+|||||++|+... ...++++||+||
T Consensus 430 ~~g~----ivIITADHGn~e~m~------d-~~t------g~~~~~HT~~~VPlII~~p~~i~-----~~~~sL~DIaPT 487 (507)
T PRK05434 430 KVGG----TLLITADHGNAEQMI------D-PET------GQPHTAHTTNPVPFILVGGKALR-----LEGGKLADIAPT 487 (507)
T ss_pred hCCC----EEEEEcCCCcccccc------c-CCC------CCcccCCCCeeeEEEEEECCccc-----CCCccHHHHHHH
Confidence 8875 899999999653100 0 000 11223455689999999997321 135689999999
Q ss_pred HHHHhCCCCCCC
Q psy12301 407 LYTAAGGDTSRL 418 (632)
Q Consensus 407 ll~l~Gi~~p~~ 418 (632)
||+++|++.|..
T Consensus 488 IL~LlGi~~P~~ 499 (507)
T PRK05434 488 ILDLLGLEQPAE 499 (507)
T ss_pred HHHHhCcCCCCC
Confidence 999999998764
No 23
>PF01663 Phosphodiest: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro: IPR002591 This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase I / nucleotide pyrophosphatase (nppase). These enzymes catalyse the cleavage of phosphodiester and phosphosulphate bonds in NAD, deoxynucleotides and nucleotide sugars []. Another member of this family is ATX an autotaxin, tumor cell motility-stimulating protein which exhibits type I phosphodiesterases activity []. The alignment encompasses the active site [, ]. Also present within this family is 60 kDa Ca2+-ATPase from Myroides odoratus []. This signature also hits a number of ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis.; GO: 0003824 catalytic activity; PDB: 2XRG_A 2XR9_A 3T02_A 3T01_A 3SZZ_A 3SZY_A 3T00_A 3NKM_A 3NKN_A 3NKR_A ....
Probab=99.57 E-value=2.5e-16 Score=167.21 Aligned_cols=230 Identities=19% Similarity=0.232 Sum_probs=128.7
Q ss_pred eEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeec--CCCCccceeeeccCCCCCcCccCCCCCCCCC----
Q psy12301 83 TTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ--PVCTPSRASLMTGKYPIHTGMQGPPIWGAEP---- 156 (632)
Q Consensus 83 IvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~--~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~---- 156 (632)
||+|++|+++++.+..+- ..+|||.+|+++|+.+.+..+. +.|.|+++||+||.+|..||+.++.......
T Consensus 1 vv~i~iDGl~~~~l~~~~---~~~p~l~~l~~~G~~~~~~~s~~Ps~T~~~~~si~TG~~P~~HGi~~~~~~~~~~~~~~ 77 (365)
T PF01663_consen 1 VVVIGIDGLRPDLLDRYI---GNLPNLKRLAEEGVYGPNLRSVFPSTTAPNWASILTGAYPEEHGIIGNYWYDPKTGKES 77 (365)
T ss_dssp EEEEEETT-BHHHHHHHH---TSSHHHHHHHHHSEEECEEE-SSSBSHHHHHHHHHHSS-HHHHS--SSCEEETTTTEEE
T ss_pred cEEEEEeCCCHHHHHhHh---ccCHHHHHHHHCCCCCCCceecCCCCcccchhhhhcCccccccCCccccccCccccccc
Confidence 799999999999986432 5799999999999999987774 5566999999999999999999875421110
Q ss_pred ---CC--C--CCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccc
Q psy12301 157 ---RG--V--PLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNG 229 (632)
Q Consensus 157 ---~~--l--~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 229 (632)
.. . .....++.+.++++|.++++++........... ..-++...+.+.....+.......... .+
T Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~~~g~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~P~~~~~~~~-----~~ 149 (365)
T PF01663_consen 78 TFWDELGDSGDVDSPPIWESLAKAGKKVAVFGWPGTHPPYPGL---NGILDPSFGTPDTYRYYSPKSLSDELY-----DG 149 (365)
T ss_dssp CEESSSSGGGCCCCHEHHHHHHHTT-EEEECS-CTTSSHHHCC---TCCCCTCTT-EESSTCCCCSCCHHHHH-----HH
T ss_pred cccccccccccccchhHHHHHHHcCCceeeecccccccccccc---ccccccccccccccccccccccccchh-----hc
Confidence 00 0 123358999999999999988542221100000 000010001000000010000000000 00
Q ss_pred cccccCcccc----cCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHH
Q psy12301 230 HDMRRNLSTA----WDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRR 305 (632)
Q Consensus 230 ~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~ 305 (632)
. ..... ........++.+.+.+...|++ .+|-|+++++..++. ....+.. ...
T Consensus 150 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~pdl~~~~~~~~D~------------~~H~~g~----~s~ 206 (365)
T PF01663_consen 150 Q----GDNPLYLAWFFEQSPELDEWITDAAEYLIQK---ERPDLIFVYFPEPDH------------IGHRYGP----DSP 206 (365)
T ss_dssp C-----HHCHSTCHHHSSSHHHHHHHHHHHHHHHHT---TTESEEEEEEECCHH------------HHHHH-T----TSH
T ss_pred c----ccccccccccccchHHHHHHHHHHHHHHHhh---CCCCEEEEEecCCCc------------cccCCCC----CCH
Confidence 0 00000 0000112233333344444544 458898888887765 2222222 123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 306 TYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 306 ~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
.+..+++.+|.+||+|++.|++.+..++|.||++||||...
T Consensus 207 ~~~~~~~~~D~~ig~l~~~l~~~~~~~~~~iiv~SDHG~~~ 247 (365)
T PF01663_consen 207 EIEDAYRRIDQAIGRLLEALDENGLLEDTNIIVTSDHGMTP 247 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEES---EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCceEEEEEccCcccc
Confidence 47789999999999999999999999999999999999976
No 24
>PF02995 DUF229: Protein of unknown function (DUF229); InterPro: IPR004245 Members of this family are uncharacterised with a long conserved region that may contain several domains.
Probab=99.46 E-value=5.9e-13 Score=145.33 Aligned_cols=275 Identities=17% Similarity=0.151 Sum_probs=166.9
Q ss_pred hhccCceEEEEEEccCCccccCCCCCCCCCCcHHHH-HHcccccceeee--cCCCCccceeeeccCCCCCcCccCCCCCC
Q psy12301 77 AALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDAL-AYNGIILNNMYA--QPVCTPSRASLMTGKYPIHTGMQGPPIWG 153 (632)
Q Consensus 77 a~~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~L-a~~Gv~F~n~ys--~~~~~Psr~sllTG~~p~~~g~~~~~~~~ 153 (632)
...+|||++|++||++...+ .-.+|..-++ .+.|...=..|. +..|.|...+|+||..-....+......
T Consensus 123 ~~~~~sV~ilgiDS~Sr~~f------~R~mPkT~~~l~~~~~~~f~gyn~vgdnt~~Nl~alltG~~~~~~~~~~~~~~- 195 (497)
T PF02995_consen 123 SESKPSVLILGIDSMSRMNF------RRSMPKTVKFLRELGAVEFKGYNKVGDNTFPNLMALLTGKIFSEKELKADCNK- 195 (497)
T ss_pred cCCCCcEEEEEeeccChhhh------hhcCcHHHHHHHhCCCEEEccccccCCCcHHHHHHHHhcCCCCchhhcccccc-
Confidence 35579999999999986544 3356655444 444444334454 4678899999999962111111111000
Q ss_pred CCCCCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccc
Q psy12301 154 AEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMR 233 (632)
Q Consensus 154 ~~~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 233 (632)
.....-....+.|++.++++||.|++.-.|.... .......||.. ...++|-.......... .....
T Consensus 196 ~~~~~~~d~~~~iw~~fk~~GY~T~~~ED~~~~~---~f~y~~~GF~~------~ptDhy~rpf~~~~e~~----~~~~~ 262 (497)
T PF02995_consen 196 PYCKGYLDKCPFIWKDFKKAGYVTAYAEDWPSIG---TFNYRKKGFKK------QPTDHYLRPFMLAAEKH----LNKFR 262 (497)
T ss_pred ccCCCCcccccHHHHHHhhcCceEEEecCccccc---ccccCCCCCCC------CCCCcccchHHHHHHHh----cccee
Confidence 1111223467899999999999999986652221 12223456653 22343322211110000 00000
Q ss_pred cCcccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHH
Q psy12301 234 RNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKK 313 (632)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~ 313 (632)
.. . .....+...-+.+.+.+.+|++.. .+.|+|.++++...|+. +.+.+..
T Consensus 263 ~~-~-~~C~g~~~~~~~~~dy~~~f~~~y-~~~~~F~~~w~~~~~h~--------------------------~~~~~~~ 313 (497)
T PF02995_consen 263 RF-G-LKCLGGRESHEYLLDYIEQFMEAY-KDRPKFGFFWFNSLSHD--------------------------DFNGPSS 313 (497)
T ss_pred cc-C-CCccCchHHHHHHHHHHHHHHHHh-hccceeeEEEecccccc--------------------------ccchhHH
Confidence 00 0 002223344566777778888754 36789998888777661 5566889
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEE-ECCCCCCC--
Q psy12301 314 LDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAIL-WSPQIQQN-- 390 (632)
Q Consensus 314 ~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii-~~P~~~~~-- 390 (632)
+|..+-++|+.+++.|+++||+|||+||||...+.. +.......| .+.|++. +-|...+.
T Consensus 314 ~D~~~~~~l~~~~~~g~l~nT~vi~~SDHG~R~g~~---------------r~t~~G~~E--erlP~l~i~lP~~fr~~~ 376 (497)
T PF02995_consen 314 LDDDLLDFLEKLQEEGVLDNTFVIFMSDHGLRFGSF---------------RETSQGKLE--ERLPFLFISLPPWFREKY 376 (497)
T ss_pred HHHHHHHHHHHhhhcCcccccEEEEEcCCCcccCcc---------------ccccccchh--hcCccceeEcCHHHHhHH
Confidence 999999999999999999999999999999987322 211222233 3788764 55653221
Q ss_pred -------CceecCccchhhHHHHHHHHhCCCCCC
Q psy12301 391 -------PRVSLQMMHISDWLPTLYTAAGGDTSR 417 (632)
Q Consensus 391 -------g~~~~~~vs~~Di~PTll~l~Gi~~p~ 417 (632)
..-.+.+++..||..||.+++.+....
T Consensus 377 p~~~~nL~~N~~rL~T~~Dlh~TL~~il~~~~~~ 410 (497)
T PF02995_consen 377 PEAVENLKENQNRLTTPFDLHATLKDILNLQELS 410 (497)
T ss_pred HHHHHHHHHHHhccCChhHHHHHHHHHhcccccc
Confidence 012368999999999999999987643
No 25
>TIGR03397 acid_phos_Burk acid phosphatase, Burkholderia-type. A member of this family, AcpA from Burkholderia mallei, has been charactized as a surface-bound glycoprotein with acid phosphatase activity, as can be shown with the colorigenic substrate 5-bromo-4-chloro-3-indolyl phosphate. This family shares regions of sequence similarity with phosphocholine-preferring phospholipase C enzymes (TIGR03396) from many of the same species.
Probab=99.44 E-value=7.2e-12 Score=132.66 Aligned_cols=89 Identities=25% Similarity=0.298 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCEEEEEEcc-CCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCC
Q psy12301 311 VKKLDDSVGTVISALQRKGMLENSIIIFMSD-NGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQ 389 (632)
Q Consensus 311 i~~~D~~iG~ll~~L~~~g~~dnTlII~tSD-HG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~ 389 (632)
|...|..||+||+.|++.++++||+||||+| ||... ++ .. ..|...|++++|||+||.+|+. +
T Consensus 365 v~~gD~~vg~vl~aL~~~p~w~NTlII~T~DENGG~~-Dh----------v~----pPk~~~~ggG~RVP~IVisP~~-k 428 (483)
T TIGR03397 365 VAAGDRHIADVIAHLQKSPQWKNMVVIVTYDENGGFW-DH----------VA----PPKGDRWGPGTRIPAIVVSPFA-K 428 (483)
T ss_pred HHHHHHHHHHHHHHHHhCccccCcEEEEEEECCCCcC-cC----------CC----CCCcCCCCCccEEEEEEEECCC-C
Confidence 8899999999999999999999999999999 98643 11 11 1367899999999999999997 6
Q ss_pred CCceecCccchhhHHHHHHHHhCCCC
Q psy12301 390 NPRVSLQMMHISDWLPTLYTAAGGDT 415 (632)
Q Consensus 390 ~g~~~~~~vs~~Di~PTll~l~Gi~~ 415 (632)
+|.+.+.+++++||++||.+++|++.
T Consensus 429 ~G~v~~~~~dh~SiL~Tie~~~GL~~ 454 (483)
T TIGR03397 429 KGYVDHTPYDTTSILRFITRRFGLPP 454 (483)
T ss_pred CCcEeCceeeeehHHHHHHHHhCCCC
Confidence 78889999999999999999999976
No 26
>KOG2645|consensus
Probab=99.41 E-value=4.1e-12 Score=132.59 Aligned_cols=202 Identities=18% Similarity=0.238 Sum_probs=126.8
Q ss_pred hccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeec--CCCCccceeeeccCCCCCcCccCCCCCCCC
Q psy12301 78 ALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ--PVCTPSRASLMTGKYPIHTGMQGPPIWGAE 155 (632)
Q Consensus 78 ~~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~--~~~~Psr~sllTG~~p~~~g~~~~~~~~~~ 155 (632)
...|.+|+|.+|++|++.+.. ..||+|..|++.|+..++.+.. +.|.|.+.||.||+||..||+.++..+...
T Consensus 20 ~~~p~lllis~DGFr~~yl~~-----~~~p~i~~l~~~gv~~~~~~pvFpT~TfPNhySivTGlype~HGIv~N~~~Dp~ 94 (418)
T KOG2645|consen 20 STHPKLLLISFDGFRADYLYK-----VLTPNIHKLASCGVWVTYVIPVFPTKTFPNHYSIVTGLYPESHGIVGNYFFDPK 94 (418)
T ss_pred CCCCCEEEEEecccchhhccC-----ccCccHHHHHhccccccEEEecCcccccCCcceeeecccchhceeeceeeeccc
Confidence 346899999999999998864 7899999999999999997764 568899999999999999999988665432
Q ss_pred CCC---------CC----CCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCcccccccc
Q psy12301 156 PRG---------VP----LTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYS 222 (632)
Q Consensus 156 ~~~---------l~----~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~ 222 (632)
... +. .. .-|+.....+|.+.++.- |. |. .....|+ ...+
T Consensus 95 ~~~~F~~~~~~~~~~~ww~~-ePiW~t~~~~~~kaa~~~-wp-g~-----~v~~~~~---------~~~~---------- 147 (418)
T KOG2645|consen 95 TNKEFDLFTNSDLEPFWWNG-EPIWVTARKQGRKVATFF-WP-GC-----EVEIHGY---------IPDP---------- 147 (418)
T ss_pred cccccccCCCccccccccCC-CcchhhhhhcCCceeEEe-cC-Cc-----ccccccc---------cccc----------
Confidence 110 00 11 223333444554433321 00 00 0000000 0000
Q ss_pred ccccccccccccCcccccCCCCccchhHHHHHHHHHHH--cCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCC
Q psy12301 223 RTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIE--DQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYIT 300 (632)
Q Consensus 223 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~--~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~ 300 (632)
......+.-+.+++.+.++ -...++|-|+.+.+..+...-+ -+.++
T Consensus 148 -------------------~~~~n~~~~~~~~~~~i~~~~~~~~e~p~l~~~Y~~~pD~~gh--~~Gp~----------- 195 (418)
T KOG2645|consen 148 -------------------YDIYNQSVPLEERADTVLDLDLPEKERPDLLLLYVEEPDHSGH--RYGPD----------- 195 (418)
T ss_pred -------------------cccccccccHHHHHHHHhccccccccCCCceEEeccCCCcccc--ccCCC-----------
Confidence 0000111112233333333 1234677777777766655111 11111
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 301 DPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 301 ~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
......++..+|..||.|++.|+++++.+++-||++||||+..
T Consensus 196 ---~~~v~~~l~~vD~~i~~L~~~Lk~r~L~~~vNvIi~SDHGM~~ 238 (418)
T KOG2645|consen 196 ---SPEVEKALKEVDDFIGYLIKGLKDRNLFEDVNVIIVSDHGMTD 238 (418)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHHHccccccceEEEeecCCccc
Confidence 1225678999999999999999999999999999999999986
No 27
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=99.28 E-value=1.1e-10 Score=116.66 Aligned_cols=167 Identities=17% Similarity=0.228 Sum_probs=116.7
Q ss_pred CCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCc
Q psy12301 157 RGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNL 236 (632)
Q Consensus 157 ~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 236 (632)
.++.+..+|+.+.|+++|..|..|||..--+ ...|+...+
T Consensus 220 ya~~P~~~tvl~~L~e~g~~vi~IGKI~DI~-------~~~Git~~~--------------------------------- 259 (397)
T COG1015 220 YAVKPFAPTVLDKLKEAGRPVIAIGKIADIY-------AGQGITEKV--------------------------------- 259 (397)
T ss_pred cccCCChhhHHHHHHHcCCceEEEeeHHhhh-------ccccccccc---------------------------------
Confidence 4566778899999999999999999942111 122332111
Q ss_pred ccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHH
Q psy12301 237 STAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDD 316 (632)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~ 316 (632)
.........+..++.++++..+ -|++.++.+... .|.+..+ ...|.++++.+|+
T Consensus 260 -------~~~~n~~~~d~tl~~~~~~~~~--~~vFtNlVdfD~---------------~yGHRrD--v~gYa~aLe~FD~ 313 (397)
T COG1015 260 -------KAVSNMDGMDVTLEEMKTAEFN--GLVFTNLVDFDS---------------LYGHRRD--VAGYAAALEEFDR 313 (397)
T ss_pred -------cCCCcHHHHHHHHHHHhcCCCC--cEEEEeeeeccc---------------ccccccc--hHHHHHHHHHHHH
Confidence 0122345678888888864323 466777777665 1223222 4679999999999
Q ss_pred HHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceecC
Q psy12301 317 SVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQ 396 (632)
Q Consensus 317 ~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~~ 396 (632)
.+.+|++.|+ ++-++|+|+|||.-.. | .| +. ...-+||+|+++|++++. . ...
T Consensus 314 rL~e~~~~l~-----edDlLiiTADHGnDPT----------~------~g---Td-HTRE~iPvl~y~~~~k~~-~-lg~ 366 (397)
T COG1015 314 RLPELIENLR-----EDDLLIITADHGNDPT----------W------GG---TD-HTREYIPVLVYGPGLKPG-S-LGT 366 (397)
T ss_pred HHHHHHHhcC-----CCCEEEEecCCCCCCC----------C------CC---CC-ccccccceEEEcCCccCC-c-ccc
Confidence 9999999998 7789999999998751 1 01 11 113579999999998654 3 355
Q ss_pred ccchhhHHHHHHHHhCCCCC
Q psy12301 397 MMHISDWLPTLYTAAGGDTS 416 (632)
Q Consensus 397 ~vs~~Di~PTll~l~Gi~~p 416 (632)
.-+..||..||++.+|++.+
T Consensus 367 r~tfADiGaTvA~~fgv~~~ 386 (397)
T COG1015 367 RETFADIGATVADNFGVSPP 386 (397)
T ss_pred cccHHHHHHHHHHHhCCCCc
Confidence 56889999999999999864
No 28
>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases. This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....
Probab=99.26 E-value=3.4e-12 Score=127.69 Aligned_cols=125 Identities=17% Similarity=0.327 Sum_probs=88.9
Q ss_pred cchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy12301 246 YATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISAL 325 (632)
Q Consensus 246 ~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L 325 (632)
+.+..+++.+++.|++ .++-|+++++..+.. ..+. .....|..+|+.+|+.|++|++.|
T Consensus 123 ~~~~~~~~~~~~~l~~---~~~~~v~~~~~~~D~----------------~GH~--~~~~~~~~~ie~~D~~l~~l~~~~ 181 (252)
T PF01676_consen 123 MSAKEIAEAAIEALKK---DKYDFVFVHVKGTDE----------------AGHR--GDPEAYIEAIERIDRFLGRLLEAL 181 (252)
T ss_dssp TTHHHHHHHHHHHHHH---TTSSEEEEEEEHHHH----------------HHTT--T-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhhhc---ccCCeEEEeecCcch----------------hhcc--CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567888888865 345589998887743 1111 124679999999999999999999
Q ss_pred HHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceecCccchhhHHH
Q psy12301 326 QRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHISDWLP 405 (632)
Q Consensus 326 ~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~~~vs~~Di~P 405 (632)
++ ++++||+|||||...... + + ....-.||+++++|+.... . .....++.||+|
T Consensus 182 ~~----~~~~liiTaDHg~~~~~~-----------------~--~-~Ht~~~VPll~~g~~~~~~-~-~~~~~~~~di~~ 235 (252)
T PF01676_consen 182 DK----EDDLLIITADHGNDETMG-----------------H--T-SHTREPVPLLIYGPGVRGD-S-VGEFGELADIAP 235 (252)
T ss_dssp HH----TTEEEEEEESSBSTTTSB-----------------S--S-S-B-B-EEEEEECTTEEE--S-C-STSBCGHHHH
T ss_pred hc----CCCEEEEECCCCCccccC-----------------C--c-CCCCceEEEEEEeCCCccC-c-cCcCCEEehHHH
Confidence 65 679999999999876211 1 0 0112379999999986432 2 245668899999
Q ss_pred HHHHHhCCCCCC
Q psy12301 406 TLYTAAGGDTSR 417 (632)
Q Consensus 406 Tll~l~Gi~~p~ 417 (632)
||++++|++.|.
T Consensus 236 ti~~~~G~~~~~ 247 (252)
T PF01676_consen 236 TILELLGLELPE 247 (252)
T ss_dssp HHHHHHTGGHHT
T ss_pred HHHHHcCCCchH
Confidence 999999998764
No 29
>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Probab=99.20 E-value=5.9e-10 Score=119.40 Aligned_cols=144 Identities=13% Similarity=0.122 Sum_probs=93.9
Q ss_pred CCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHH
Q psy12301 242 TVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTV 321 (632)
Q Consensus 242 ~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~l 321 (632)
....-+...+++++++.|++ ++.-|+++++..+.. ..+. .....+..+|+.+|.+||+|
T Consensus 399 ~~PeMSA~eVtd~~i~~i~~---~~ydfi~vNfan~Dm----------------vGHt--G~~ea~ikAIE~vD~~Lg~I 457 (558)
T PLN02538 399 VQPKMKALEIAEKARDALLS---GKFDQVRVNLANGDM----------------VGHT--GDLEATIVACEAVDAAVKEI 457 (558)
T ss_pred cCCCCCHHHHHHHHHHHHhc---CCCCEEEEeccCccc----------------ccCC--CCHHHHHHHHHHHHHHHHHH
Confidence 33455677889999999986 456689999988876 1121 13456888999999999999
Q ss_pred HHHHHHcCCCCCEEEEEEccCCCCC--CCcccccCcCCCCCCCcccCCCCcc--c--CCcceeeEEEECCCCCCCCceec
Q psy12301 322 ISALQRKGMLENSIIIFMSDNGAPT--VEYRETSNYRNWGSNYPYRGVKNTL--W--EGGVKVPAILWSPQIQQNPRVSL 395 (632)
Q Consensus 322 l~~L~~~g~~dnTlII~tSDHG~~~--~g~~~~~~~~~~g~~~~~~g~k~~~--~--e~~~~VPlii~~P~~~~~g~~~~ 395 (632)
++++++.| .++|+|||||-.. ... ...|. +..+..++. + -..-.||+||++|+..+.-....
T Consensus 458 l~al~~~g----~~liITADHGNaE~M~d~------~~~G~--p~~~~~Gtp~~~t~HT~npVP~Ii~g~~~~~~~~l~~ 525 (558)
T PLN02538 458 LDAVEQVG----GIYLVTADHGNAEDMVKR------DKSGK--PLLDKDGNPQILTSHTLAPVPVAIGGPGLPPGVRFRD 525 (558)
T ss_pred HHHHHhcC----CEEEEeCCCCCchhhccc------cccCC--ccccccCCCCCCCCCCCCCcCEEEEeCCcccCccccc
Confidence 99998654 7899999999542 100 00011 001100110 0 01246999999998543111111
Q ss_pred --CccchhhHHHHHHHHhCCCCCCC
Q psy12301 396 --QMMHISDWLPTLYTAAGGDTSRL 418 (632)
Q Consensus 396 --~~vs~~Di~PTll~l~Gi~~p~~ 418 (632)
..-++.||+||||+++|++.|..
T Consensus 526 ~l~~~gLaDVApTIL~lLGl~~P~e 550 (558)
T PLN02538 526 DLPTAGLANVAATVMNLHGFEAPAD 550 (558)
T ss_pred CccCCcHHhHHHHHHHHhCCCCchh
Confidence 11259999999999999998764
No 30
>COG1524 Uncharacterized proteins of the AP superfamily [General function prediction only]
Probab=99.14 E-value=2e-10 Score=125.25 Aligned_cols=74 Identities=23% Similarity=0.318 Sum_probs=62.4
Q ss_pred hhccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeec--CCCCccceeeeccCCCCCcCccCCCCCC
Q psy12301 77 AALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ--PVCTPSRASLMTGKYPIHTGMQGPPIWG 153 (632)
Q Consensus 77 a~~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~--~~~~Psr~sllTG~~p~~~g~~~~~~~~ 153 (632)
.++++-+|+|++|++|+|.+... ...+|+|.+|+++|+.+..+.+. +.|.|.+.+|+||.+|..||+.+|....
T Consensus 35 ~~~~~klvli~iDgl~~d~~~~~---~~~~p~l~~l~~~g~~~~~~~s~~Pt~T~p~~~tl~TG~~P~~hgi~~N~~~~ 110 (450)
T COG1524 35 PAPKKKLVLISIDGLRADVLDRK---AGILPFLSSLAENGVHVAELISVFPTTTRPRHTTLITGSYPDEHGIVGNILYD 110 (450)
T ss_pred CcchheEEEEEEeccChhhhhhh---ccCchhHHHHHhCCceeEEEecCCCccccccceeeecccCcchhccccccccC
Confidence 45577899999999999988653 45799999999999987777774 4566999999999999999999886544
No 31
>KOG2126|consensus
Probab=99.07 E-value=7.1e-10 Score=121.85 Aligned_cols=248 Identities=17% Similarity=0.220 Sum_probs=146.0
Q ss_pred eEEEEEEccCCccccCCCCCC-----C-CCCcHHHHHHcccccceeee-cCCCCccc-eeeeccCCCCCcCccCCCCCCC
Q psy12301 83 TTLTLLIVYGWNDLSFHGSNE-----I-PTPNIDALAYNGIILNNMYA-QPVCTPSR-ASLMTGKYPIHTGMQGPPIWGA 154 (632)
Q Consensus 83 IvlI~~D~~r~d~l~~~G~~~-----~-~TPnld~La~~Gv~F~n~ys-~~~~~Psr-~sllTG~~p~~~g~~~~~~~~~ 154 (632)
||++++|.+|+|.+=.+.++. . ..-++..|-+++.....+.+ +|.|+-.| -.+-||..|.---++.|..
T Consensus 61 vvilliDaLrydf~ip~~~~~~y~n~~~~l~~~~~l~~~~~~l~~f~ADpPTTTlQRLKGLTTGsLPTFID~GsNF~--- 137 (895)
T KOG2126|consen 61 VVILLIDALRYDFLIPINSPLPYHNRGTILQELKHLNKSKAFLAKFIADPPTTTLQRLKGLTTGSLPTFIDIGSNFA--- 137 (895)
T ss_pred eEEEEeehhhhccccccCCCchhhhcchhHHHHHhhCcchhHHHHHhcCCCccHHHHhhccccCCCccceeccccCC---
Confidence 999999999999655444211 1 11223333445555556667 47777666 4788899987655544421
Q ss_pred CCCCCCCCCCcHHHHHHhcCCceeeccc--CcCCCCCCCCCCCCCCCCccccccCCccCCCCcccccccccccccccccc
Q psy12301 155 EPRGVPLTERFLPEYLRELGYSTKAIGK--WHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDM 232 (632)
Q Consensus 155 ~~~~l~~~~~tl~~~Lk~~GY~T~~igk--~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 232 (632)
+-.-.+..+...+..+|-...+.|. |..-+ |.. |...+.+. . |+ .++.
T Consensus 138 ---g~~I~EDNfv~Ql~~~gk~vvflGDdTW~~LF------p~~--f~~s~s~p----S-fn------------v~DL-- 187 (895)
T KOG2126|consen 138 ---GPAIAEDNFVRQLVLNGKSVVFLGDDTWTSLF------PNQ--FNKSYSFP----S-FN------------VHDL-- 187 (895)
T ss_pred ---CcccchhHHHHHHHHCCCeEEEecCccHHHhC------hHh--hcCCCCCC----C-CC------------Cccc--
Confidence 1223566889999999999999986 32221 110 11000000 0 00 0000
Q ss_pred ccCcccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHH
Q psy12301 233 RRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVK 312 (632)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~ 312 (632)
.-.|+.+.+...+.|++. .=-.+..|+.+..+ +++...+........+.
T Consensus 188 ------------dtVDn~v~~~if~~l~s~---dwdVlIAHfLGVDH----------------~GHk~GPdH~~M~~KL~ 236 (895)
T KOG2126|consen 188 ------------DTVDNGVIEKIFKSLNSK---DWDVLIAHFLGVDH----------------CGHKHGPDHPEMADKLV 236 (895)
T ss_pred ------------cccchHHHHHhhhhhccC---chHHHHHHHhCccc----------------ccccCCCCCHHHHHHHH
Confidence 112334444444444421 11234445555554 22222233344667789
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCC----
Q psy12301 313 KLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQ---- 388 (632)
Q Consensus 313 ~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~---- 388 (632)
.+|+.|+++++.++ |||++|++||||+...|. ++...+..++.-++++.+...
T Consensus 237 qmD~vI~~ii~~md-----edTlLvVmGDHGMt~nGd------------------HGGdS~dEv~a~lf~ySKk~~f~~l 293 (895)
T KOG2126|consen 237 QMDRVINEIIKKMD-----EDTLLVVMGDHGMTDNGD------------------HGGDSEDEVEATLFAYSKKHRFALL 293 (895)
T ss_pred HHHHHHHHHHHHhc-----cCeeEEEecCCCCCCCCC------------------CCCccHHHhhhheeEEecCccccCC
Confidence 99999999999999 999999999999987332 222334456666777766422
Q ss_pred CCCceecCccchhhHHHHHHHHhCCCCCCC
Q psy12301 389 QNPRVSLQMMHISDWLPTLYTAAGGDTSRL 418 (632)
Q Consensus 389 ~~g~~~~~~vs~~Di~PTll~l~Gi~~p~~ 418 (632)
+++. ..+...++|+.||+.-++|++.|-.
T Consensus 294 p~~~-~~~~~~QIDLVptlalllGlPIPf~ 322 (895)
T KOG2126|consen 294 PPEN-KVESIEQIDLVPTLALLLGLPIPFS 322 (895)
T ss_pred CCCC-CccceeeehhHhHHHHHhCCCCCcc
Confidence 1211 1234789999999999999998753
No 32
>KOG2125|consensus
Probab=99.02 E-value=3.1e-10 Score=121.43 Aligned_cols=257 Identities=16% Similarity=0.137 Sum_probs=143.3
Q ss_pred ccCceEEEEEEccCCccccCCCCCCCCCCcHHHHHHc--ccccceeee-c-CCCCccceeeeccCCCCCcCccCCCCCCC
Q psy12301 79 LTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYN--GIILNNMYA-Q-PVCTPSRASLMTGKYPIHTGMQGPPIWGA 154 (632)
Q Consensus 79 ~~pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~--Gv~F~n~ys-~-~~~~Psr~sllTG~~p~~~g~~~~~~~~~ 154 (632)
..+-+|++++|.+|.|.+- + .+..+|+-..++.. +.-|. +|+ . ++|.|-.-++.||..|.---+--|.....
T Consensus 49 ~~~~lvf~viDalr~dF~~--~-s~~smp~t~s~~~~~~a~g~~-a~A~~PTVTmPRLka~tTGtlp~FidvllNva~~~ 124 (760)
T KOG2125|consen 49 EKDRLVFVVIDALRADFLF--S-SKESMPFTQSLLANGDAKGYH-AFARPPTVTMPRLKAITTGTLPSFIDVLLNVATQE 124 (760)
T ss_pred ccceEEEEEhhhhhhhccc--c-CCCCCccHHHHHhcCCceeee-cccCCCcccchhhhhhhcCCCccHHHHHHhhhhHh
Confidence 4678999999999998774 2 27789999887653 33344 444 3 67889999999999997544433321111
Q ss_pred CCCCCCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCcccccccccccccccccccc
Q psy12301 155 EPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRR 234 (632)
Q Consensus 155 ~~~~l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 234 (632)
.....+-..+++.|-+..+.|.-.. -...|. -|..+.| ...+|-.... +..+
T Consensus 125 ------~~~d~wl~q~~~~n~kv~f~GDdTW----LkLfPs--~f~~f~g----~~SFfVsDyt------------~vDn 176 (760)
T KOG2125|consen 125 ------LLDDNWLGQFFQINKKVHFNGDDTW----LKLFPS--EFLRFEG----VTSFFVSDYT------------DVDN 176 (760)
T ss_pred ------hcccHHHHHHHHhCcEEEEccchHH----HHHhhH--HHHhccC----cceEEehhhh------------hhhh
Confidence 0112367788888888887764000 000010 0111111 1111100000 0000
Q ss_pred CcccccCCCCccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHH
Q psy12301 235 NLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKL 314 (632)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~ 314 (632)
+.....+......+++ .-..+.++-- + ..-|..++|. |. --+.+.++
T Consensus 177 NVTr~L~~l~~~~~~W-d~lILHYLGl---D----HIGH~~G~~S-----p~--------------------vp~KLkEm 223 (760)
T KOG2125|consen 177 NVTRHLPTLELNSSDW-DLLILHYLGL---D----HIGHVLGPSS-----PL--------------------VPAKLKEM 223 (760)
T ss_pred hhhhcCCchhhhhcch-hHHHHHHhcc---c----eeccccCCcc-----hh--------------------hhHHHHHH
Confidence 0000000000000000 0001111100 0 0112223333 22 33568899
Q ss_pred HHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCC--CCc
Q psy12301 315 DDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQ--NPR 392 (632)
Q Consensus 315 D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~--~g~ 392 (632)
|+-+++|.+++++..-.++|++|+++|||....|. |.+. -.+.+.+|++++.|+..- -..
T Consensus 224 Deiv~~I~~~~~~~~s~d~tllil~gDHGM~e~Gn-----------------HGGs-s~~ET~s~l~~~~~N~~~~d~~~ 285 (760)
T KOG2125|consen 224 DEIVKRIHDYLMEHRSGDQTLLILCGDHGMTESGN-----------------HGGS-SPGETSSPLLFLLPNSNISDWLA 285 (760)
T ss_pred HHHHHHHHHHHhhcCCCCceEEEEEccccccccCC-----------------CCCC-CcccccccEEEEecCCCCcccch
Confidence 99999999999998777899999999999987332 2222 334589999999984110 011
Q ss_pred eecCccchhhHHHHHHHHhCCCCCCC
Q psy12301 393 VSLQMMHISDWLPTLYTAAGGDTSRL 418 (632)
Q Consensus 393 ~~~~~vs~~Di~PTll~l~Gi~~p~~ 418 (632)
.....+.++|++|||..++|++.|..
T Consensus 286 a~~~rv~QiDl~pTI~~llgvpIP~~ 311 (760)
T KOG2125|consen 286 AGLERVEQIDLAPTIALLLGVPIPKG 311 (760)
T ss_pred hccchhhhhhhHHHHHHHhCCCccCC
Confidence 22566889999999999999999864
No 33
>KOG4513|consensus
Probab=98.90 E-value=2.6e-08 Score=99.08 Aligned_cols=133 Identities=18% Similarity=0.194 Sum_probs=85.7
Q ss_pred chhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q psy12301 247 ATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQ 326 (632)
Q Consensus 247 ~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~ 326 (632)
....+.+++++.|++- .-|+ +.+++..+... .+..+ ...--.+++.+|.+||+|+++++
T Consensus 388 ~a~eva~ka~~~ie~G--~~p~-v~vNlappDMV----------------GHTG~--~EAtv~AcEatD~aig~Iy~A~~ 446 (531)
T KOG4513|consen 388 KALEVAEKARDAIESG--KFPQ-VRVNLAPPDMV----------------GHTGD--IEATVVACEATDEAIGKIYDAIE 446 (531)
T ss_pred hHHHHHHHHHHHHHcC--CCCe-EEEcCCCcccc----------------Ccccc--hhhhhhHHHHHHHHHHHHHHHHH
Confidence 3455778888888852 2344 45555544331 11111 11233568899999999999999
Q ss_pred HcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCce---ecCccchhhH
Q psy12301 327 RKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRV---SLQMMHISDW 403 (632)
Q Consensus 327 ~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~---~~~~vs~~Di 403 (632)
+.| -++|+|+|||... .... . -++|.+ -....+||++|-.||..+.-+. .+.--++.|+
T Consensus 447 ~~~----y~lvvTADHGNAE-kMv~----~--------dgGk~t-sHT~~~VPl~i~~pg~~~g~~f~~~~dt~p~L~dV 508 (531)
T KOG4513|consen 447 QVG----YILVVTADHGNAE-KMVK----R--------DGGKLT-SHTLKPVPLAIGGPGLVKGVRFRGDVDTDPGLADV 508 (531)
T ss_pred hcC----cEEEEEcCCCCHH-Hhcc----C--------CCCccc-cccccccceEecCCccccceeeccccccCchhhhh
Confidence 876 5899999999864 1100 0 012222 1234689999999987654222 2333468999
Q ss_pred HHHHHHHhCCCCCCC
Q psy12301 404 LPTLYTAAGGDTSRL 418 (632)
Q Consensus 404 ~PTll~l~Gi~~p~~ 418 (632)
+||+|.++|++.|..
T Consensus 509 ApTVl~imG~p~PsE 523 (531)
T KOG4513|consen 509 APTVLNIMGFPAPSE 523 (531)
T ss_pred hHHHHHHhCCCCccc
Confidence 999999999998864
No 34
>PRK10518 alkaline phosphatase; Provisional
Probab=98.83 E-value=6.9e-08 Score=102.91 Aligned_cols=137 Identities=13% Similarity=0.195 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy12301 249 DLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRK 328 (632)
Q Consensus 249 ~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~ 328 (632)
..++++||+.|++ .++.|||+|--.....- .|..+ -..-...+..+|++|+..++..++.
T Consensus 327 aeMT~kAI~~Lsk--n~~GFFLmVEGg~ID~a----------------~H~nd--a~~~i~E~~~fD~AV~~A~~~~~~~ 386 (476)
T PRK10518 327 AQMTDKAIDLLKK--NEKGFFLQVEGASIDKQ----------------DHAAN--PCGQIGETVDLDEAVQKALEFARKD 386 (476)
T ss_pred HHHHHHHHHHhcc--CCCceEEEeeccccchh----------------hccCC--HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4589999999975 36899999976555441 01111 1223345678999999999999976
Q ss_pred CCCCCEEEEEEccCCCCC--CCcccccCcCCCC------CCCcc--cCC---CCcccCCcceeeEEEECCCCCCCCceec
Q psy12301 329 GMLENSIIIFMSDNGAPT--VEYRETSNYRNWG------SNYPY--RGV---KNTLWEGGVKVPAILWSPQIQQNPRVSL 395 (632)
Q Consensus 329 g~~dnTlII~tSDHG~~~--~g~~~~~~~~~~g------~~~~~--~g~---k~~~~e~~~~VPlii~~P~~~~~g~~~~ 395 (632)
+|||||+|+||++.+ .+. .+ +..... ...++ ... ..+--..+.-||++.++|+.. ...
T Consensus 387 ---~dTLVIVTADH~h~~~i~g~-~~-~~~g~~~~~~~~dg~~~~l~y~~g~g~s~~HtG~dV~v~A~GP~A~----~f~ 457 (476)
T PRK10518 387 ---GNTLVIVTADHAHSSQIIAP-DA-KAPGLTQALNTKDGAVMVVSYGNSEEDSQEHTGTQLRIAAYGPHAA----NVV 457 (476)
T ss_pred ---CCeEEEEEccCCCcceecCC-CC-CCCCcccccccCCCCeeEEEeccCCCCCcCcCCceeEEEecCCccc----ccc
Confidence 599999999999876 221 00 000000 00000 000 011122457899999999852 345
Q ss_pred CccchhhHHHHHHHHhCCC
Q psy12301 396 QMMHISDWLPTLYTAAGGD 414 (632)
Q Consensus 396 ~~vs~~Di~PTll~l~Gi~ 414 (632)
....+.||+-+|...+++.
T Consensus 458 G~~eqt~if~~m~~Al~~~ 476 (476)
T PRK10518 458 GLTDQTDLFYTMKDALGLK 476 (476)
T ss_pred cceeccHHHHHHHHHhCCC
Confidence 6778999999999999873
No 35
>KOG2124|consensus
Probab=98.78 E-value=6.6e-08 Score=106.52 Aligned_cols=253 Identities=15% Similarity=0.124 Sum_probs=152.1
Q ss_pred ceEEEEEEccCCccccCCCCCCCCCCcHHHHHHc-cccc-ceeeecCCCCccceeeeccCCCCCcCccCCCCCCCCCCCC
Q psy12301 82 STTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYN-GIIL-NNMYAQPVCTPSRASLMTGKYPIHTGMQGPPIWGAEPRGV 159 (632)
Q Consensus 82 NIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~-Gv~F-~n~ys~~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~~~l 159 (632)
-.|+++.|++|+|.+-.-.. ...-|+|..+..+ |..= +++.+++.+-|++-+++-|-|...+-+...... -
T Consensus 45 RLvl~v~DGLRAd~~~~~~~-~s~ap~LR~ii~~qg~~GiS~tr~PTeSRpghvAliaGfyedpSAvtkgwk~------N 117 (883)
T KOG2124|consen 45 RLVLFVGDGLRADTLFEPNC-ESRAPFLRSIILNQGTVGISHTRVPTESRPGHVALIAGFYEDPSAVTKGWKS------N 117 (883)
T ss_pred hEEEEcccccchhhhcCccc-cccCCcHHHHHHhcCcccccccCCCCCCCCCcEEEEeccccChHHhhhhhhc------C
Confidence 58999999999987632222 1478999888655 5442 333334667799999999999887655432111 1
Q ss_pred CCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCcccc
Q psy12301 160 PLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLSTA 239 (632)
Q Consensus 160 ~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 239 (632)
|.+..++....+. |..+|.-|....-.. ...++-+.. |++. ...
T Consensus 118 Pv~FDsvFN~S~~----t~~~gs~dil~~fs~--~~~~v~~~~----------y~~~--------------------~~~ 161 (883)
T KOG2124|consen 118 PVNFDSVFNRSRH----TYSFGSPDILPMFSE--DLSHVDTPM----------YDHE--------------------LED 161 (883)
T ss_pred Cchhhhhhhhhhh----hhcccCcccchhhhc--CCCccCccc----------cchh--------------------Hhh
Confidence 2234455444442 333333222211000 000111100 0000 001
Q ss_pred cCCCCccchhHHHHHHHHHHHcCC-----------CCCCeEEeccCcC----CCCCCCCCCCCCChHHHhhcCCCCChhH
Q psy12301 240 WDTVGEYATDLFTKEAVQLIEDQP-----------VDKPLFLYLAHLA----AHAGNAGKHLEAPQETINQFQYITDPNR 304 (632)
Q Consensus 240 ~~~~~~~~~~~~~~~a~~~i~~~~-----------~~~Pffl~~~~~~----~H~p~~~~P~~~p~~~~~~~~~~~~~~~ 304 (632)
....+...|++..++..+++++.. ++--||+.+.=.+ .|. |+ .
T Consensus 162 ~~~d~~~lD~WvFd~~~~l~~~~~~~~~L~~~~~~~kvVfflhLlg~dt~gH~~~-----P~-----------------s 219 (883)
T KOG2124|consen 162 FDSDAIELDEWVFDRVDDLLHNSTNDQELRDLLHQDKIVFFLHLLGIDTAGHAHR-----PY-----------------S 219 (883)
T ss_pred ccccccccchhhhhhHHHHHhhhhcchhHHHhhccCceEEEEeecCcCccccccC-----CC-----------------c
Confidence 111234456666666666665311 1124566665555 334 32 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEEC
Q psy12301 305 RTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWS 384 (632)
Q Consensus 305 ~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~ 384 (632)
..|...+.++|..|.++.+.+++-=-.+.|.-++|+|||....|. ++.-.+++++.|++.|+
T Consensus 220 ~~y~~nl~~~d~~i~~~y~l~e~~fnD~kTayi~TaDhgms~~gs------------------Hg~G~~~~~~TPlv~WG 281 (883)
T KOG2124|consen 220 VEYRENLKYTDKGIRELYDLFENYFNDGKTAYIFTADHGMSDFGS------------------HGDGHPENTRTPLVAWG 281 (883)
T ss_pred HHHHHHhhcCCccHHHHHHHHHHHhcCCcceEEEehhcccccccc------------------cCCCCcccccChHHHhc
Confidence 458899999999999999999987447899999999999986332 22234778999999999
Q ss_pred CCCCCCC----ceec---------CccchhhHHHHHHHHhCCCCCC
Q psy12301 385 PQIQQNP----RVSL---------QMMHISDWLPTLYTAAGGDTSR 417 (632)
Q Consensus 385 P~~~~~g----~~~~---------~~vs~~Di~PTll~l~Gi~~p~ 417 (632)
-|++.+. ...+ .-+.+.||+|-.-.+.|++.|.
T Consensus 282 aGik~~~~n~~~~~~~~~~~~~~~~dl~Qa~IApLMS~LiGlp~P~ 327 (883)
T KOG2124|consen 282 AGIKYPVPNSEQNFDEYSLTEIKRHDLNQADIAPLMSYLIGLPPPV 327 (883)
T ss_pred CCCCccCCCCCcCCccccccccchhhhhHHHHHHHHHHHhCCCCcc
Confidence 9875431 1111 3357899999999999999864
No 36
>COG3379 Uncharacterized conserved protein [Function unknown]
Probab=98.75 E-value=1.4e-08 Score=102.54 Aligned_cols=99 Identities=21% Similarity=0.155 Sum_probs=74.9
Q ss_pred CceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeee-cCCCCccceeeeccCCCCCcCccCCCCCCCCCC--
Q psy12301 81 KSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYA-QPVCTPSRASLMTGKYPIHTGMQGPPIWGAEPR-- 157 (632)
Q Consensus 81 pNIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys-~~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~~-- 157 (632)
..+++|.+|+..+.-+..+ +...|||.+|.++|+.=.--.. +|+|.|+++||+||..|..+|++++........
T Consensus 4 ~K~~liGlDgvp~sl~~~f---~~~lpnl~~Lm~~~s~G~l~S~iPpIT~~~W~sl~TG~~PGe~GiygF~~Rkg~sy~~ 80 (471)
T COG3379 4 RKTLLIGLDGVPPSLFRQF---RDNLPNLNKLMKNGSFGKLESGIPPITPAAWPSLFTGYNPGETGIYGFRHRKGNSYSE 80 (471)
T ss_pred ceEEEEEeCCCCHHHHHHH---hhhhhHHHHHHHhcccccccccCCCcchhhHHHHhhccCCccccceeeecccCCccCc
Confidence 3589999999988655544 5579999999999865432222 589999999999999999999998643322111
Q ss_pred -----CCCCCCCcHHHHHHhcCCceeeccc
Q psy12301 158 -----GVPLTERFLPEYLRELGYSTKAIGK 182 (632)
Q Consensus 158 -----~l~~~~~tl~~~Lk~~GY~T~~igk 182 (632)
+.......+++.|.+.|++...+|-
T Consensus 81 ~yva~Ss~vk~~~iWD~L~~kG~k~~V~~v 110 (471)
T COG3379 81 PYVAHSSTVKEDPIWDLLGKKGKKSVVAGV 110 (471)
T ss_pred eecccccccccccHHHHHhhcCceEEEEeC
Confidence 1124567899999999999998873
No 37
>PF14707 Sulfatase_C: C-terminal region of aryl-sulfatase; PDB: 1P49_A 1E33_P 1E1Z_P 1N2K_A 1N2L_A 1E2S_P 1E3C_P 1AUK_A.
Probab=98.75 E-value=8.7e-09 Score=92.12 Aligned_cols=56 Identities=36% Similarity=0.594 Sum_probs=36.8
Q ss_pred ccccCCCCccccccccccC-h---HHHHHHHHHHHHHHHHhCCCCCCCCCccccCCcCCC-CeeecCCC
Q psy12301 568 YLFNLGNDPCEQNNIASSR-P---DISSQLYELLKYHRRTLVPQSHEQPDLVQADPKRFN-DTWSPWIY 631 (632)
Q Consensus 568 eLydl~~DP~E~~nla~~~-~---~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 631 (632)
.||||..||.|++||+..+ | +++++|.++++++++++.+...+-.. ++ ..|.||..
T Consensus 59 lLfnL~~DP~E~~~l~~~~~p~~~~vl~~l~~~~~~~~~t~~~~p~q~~~--------~~~~~~~pc~~ 119 (131)
T PF14707_consen 59 LLFNLRRDPGERYPLADSHSPEYKEVLAELQKLVDEHRATLTPVPPQLAN--------FNRSSVQPCCQ 119 (131)
T ss_dssp EEEETTT-TT--S-T-STTTCCHHHHHHHHHHHHHHHCCC------TCCH--------HC-HCGSGGCS
T ss_pred EEEeCCcCccccCcCCcCcchhHHHHHHHHHHHHHHHHhhCCCCCccccc--------CCCCccccccC
Confidence 9999999999999999977 8 99999999999999998765555443 22 46777764
No 38
>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]
Probab=98.68 E-value=2.2e-07 Score=96.62 Aligned_cols=131 Identities=18% Similarity=0.238 Sum_probs=86.8
Q ss_pred CccchhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHH
Q psy12301 244 GEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVIS 323 (632)
Q Consensus 244 ~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~ 323 (632)
..-+...+++.+++.|+. ++.-++.+++..|...++ .- ....-..+|+.+|.+||++++
T Consensus 369 PEMSa~evtd~~~~~i~~---g~~D~iV~N~ANpDMVGH-----TG-------------~~eatiKAvEavD~~lg~ivd 427 (509)
T COG0696 369 PEMSAKEVTDALVEAIEK---GKYDLIVLNYANPDMVGH-----TG-------------NFEATIKAVEAVDECLGRIVD 427 (509)
T ss_pred cccchHHHHHHHHHHHhC---CCCCEEEEecCCCccCcc-----cc-------------cHHHHHHHHHHHHHHHHHHHH
Confidence 345567788888888876 445577788877766211 10 112234568899999999999
Q ss_pred HHHHcCCCCCEEEEEEccCCCCC-CCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceecCccchhh
Q psy12301 324 ALQRKGMLENSIIIFMSDNGAPT-VEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHISD 402 (632)
Q Consensus 324 ~L~~~g~~dnTlII~tSDHG~~~-~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~~~vs~~D 402 (632)
.+++.| -.+++|+|||-.- ... .. | .| ..-...-.||+|+-....... ..-..+-|
T Consensus 428 ~~~~~g----g~~~iTaDHGNaE~m~d------~~-g--~p------~TaHT~npVp~i~~~~~~v~~----~~~g~Lad 484 (509)
T COG0696 428 AVKKNG----GTLLITADHGNAEQMSD------PA-G--NP------HTAHTTNPVPVIYTGKKGVKA----RKSGKLAD 484 (509)
T ss_pred HHHhcC----CeEEEeecCcchhhccC------CC-C--Cc------eeccccCCccEEEEcCCccee----eeccchhh
Confidence 999865 5788999999764 111 00 0 01 111223569999987332221 12278999
Q ss_pred HHHHHHHHhCCCCCCC
Q psy12301 403 WLPTLYTAAGGDTSRL 418 (632)
Q Consensus 403 i~PTll~l~Gi~~p~~ 418 (632)
|+||||+|+|++.|..
T Consensus 485 iAPTiL~llg~~~P~e 500 (509)
T COG0696 485 IAPTILDLLGLEIPAE 500 (509)
T ss_pred hhHHHHHHcCCCcchh
Confidence 9999999999999865
No 39
>smart00098 alkPPc Alkaline phosphatase homologues.
Probab=98.63 E-value=4.6e-07 Score=95.86 Aligned_cols=76 Identities=12% Similarity=0.192 Sum_probs=55.5
Q ss_pred hhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12301 248 TDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQR 327 (632)
Q Consensus 248 ~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~ 327 (632)
-..+++.||+.|++ .++.|||++--.....-. +..+ -..-...+..+|++|+..++.+++
T Consensus 236 L~eMt~~Al~~L~~--~~~GFfLmVEgg~ID~a~----------------H~nd--~~~~i~E~~~fd~AV~~a~~~~~~ 295 (419)
T smart00098 236 LAEMTEVAIRLLSK--NERGFFLMVEGGRIDHAH----------------HEND--ACGALHETVDFDQAIQAALEFAKK 295 (419)
T ss_pred HHHHHHHHHHHhhc--CCCceEEEEecccCChhh----------------ccCC--HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 35678999999975 368999999766554410 0011 122345577899999999999987
Q ss_pred cCCCCCEEEEEEccCCCCC
Q psy12301 328 KGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 328 ~g~~dnTlII~tSDHG~~~ 346 (632)
.++||||+|+||+...
T Consensus 296 ---~~dTLiiVTADH~~g~ 311 (419)
T smart00098 296 ---EDETLVIVTADHSHVG 311 (419)
T ss_pred ---CCCcEEEEEecCCCcc
Confidence 4899999999998764
No 40
>PF04185 Phosphoesterase: Phosphoesterase family; InterPro: IPR007312 This entry includes both bacterial phospholipase C enzymes (3.1.4.3 from EC) and eukaryotic acid phosphatases 3.1.3.2 from EC.; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 2D1G_B.
Probab=98.50 E-value=2e-07 Score=98.93 Aligned_cols=261 Identities=16% Similarity=0.110 Sum_probs=116.4
Q ss_pred CCccccCCCCCCCCCCcHHHHHHcccccceeeec--CCCCccceeeeccCCCCCcCccCCCCCCCCCCCCCCCCCcHHHH
Q psy12301 92 GWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ--PVCTPSRASLMTGKYPIHTGMQGPPIWGAEPRGVPLTERFLPEY 169 (632)
Q Consensus 92 r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~--~~~~Psr~sllTG~~p~~~g~~~~~~~~~~~~~l~~~~~tl~~~ 169 (632)
....|++|+ ...+|++.+||++.+.++|+|++ .-|.|.|..+++|... |...+....-.....+...+||++.
T Consensus 111 ~~~~M~~y~--~~~~P~~~~LA~~f~l~Dnyf~s~~~pS~PNr~~l~sG~~~---~~~~~~~~~~~~~~~~~~~~ti~d~ 185 (376)
T PF04185_consen 111 GGQVMGYYT--PADLPFLWALADQFTLCDNYFCSVPGPSQPNRLYLISGTSD---GVGNNGNPFIDNPSPPFSWPTIFDR 185 (376)
T ss_dssp TTGGGEE----TTTSHHHHHHHHHSEEESSEE-SSSS-HHHHHHHHHHS------TT-STS-TTS-EEES------HHHH
T ss_pred CCccceeeC--CCCChHHHHHHhheEEecccccCCCCCCCCCceEEEeeccC---ccccCCCCceecCCCCcccccHHHH
Confidence 345677776 57899999999999999999964 4566999999999762 2211100000000022356799999
Q ss_pred HHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCcccccCCCCccchh
Q psy12301 170 LRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEYATD 249 (632)
Q Consensus 170 Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 249 (632)
|.++|..=...+..-.. .......++..... ++..... .. ......... ......
T Consensus 186 L~~aGisW~~Y~e~~~~----~~~~~~~~~~~~~~-------~~~~~~~-~~----------~~~~~~~~~---~~~~~~ 240 (376)
T PF04185_consen 186 LSAAGISWKWYQEGYPN----PGDNGLAGFDPYFD-------YFYQPFN-PP----------SFGSYSPNP---DRANHI 240 (376)
T ss_dssp HHHHT--EEEEETT-S-----SEEETTEEE---EE-------E-TTS-E-------------S-GGGTTSB---STTTTE
T ss_pred HHHcCCceEeCeecCCc----cCcccccccccchh-------hhhcccc-cc----------ccccccccc---cccccc
Confidence 99999765444320000 00000001100000 0000000 00 000000000 000000
Q ss_pred HHHHHHHHHHHcCCCCCCeEEeccCc---CCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q psy12301 250 LFTKEAVQLIEDQPVDKPLFLYLAHL---AAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQ 326 (632)
Q Consensus 250 ~~~~~a~~~i~~~~~~~Pffl~~~~~---~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~ 326 (632)
.-.++..+-+++ ..=|-|.||... +-|. +. +.+..-|..|++++++|.
T Consensus 241 ~~~~~f~~d~~~--g~LP~~sfI~p~~~~d~Hp-----~~----------------------~~~~~gd~~l~~vv~ai~ 291 (376)
T PF04185_consen 241 VPLSQFYADLAN--GTLPQVSFIEPNMCNDMHP-----PY----------------------SVIADGDAFLARVVEAIR 291 (376)
T ss_dssp EECHHHHHHHHT--T---SEEEEE--GGGS--T-----TT------------------------HHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHc--CCCCceEEEEecCcCCCCC-----CC----------------------CchhHHHHHHHHHHHHHh
Confidence 111233333443 234767776553 3343 11 225788999999999999
Q ss_pred HcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCceecCccchhhHHHH
Q psy12301 327 RKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHISDWLPT 406 (632)
Q Consensus 327 ~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~~~~~vs~~Di~PT 406 (632)
....+++|+||||=|-+.-+.++..-. ...........+. ...+--|.|||+||.+|-. ++|.+.+...++.-|+-|
T Consensus 292 ~sp~W~~T~iiIt~DE~gG~~DHV~pp-~~~~~~~~~~~g~-~~~~g~G~RVP~ivISP~~-k~G~v~~~~ydh~Silrt 368 (376)
T PF04185_consen 292 NSPYWKNTAIIITYDENGGFYDHVPPP-RSPVPNPDEWVGP-FGFDGLGPRVPAIVISPYA-KGGTVDHTPYDHTSILRT 368 (376)
T ss_dssp CSTTGGGEEEEEEES--TT-----------TTTT------S-TT------B--EEEESTTB--TTEEE---EETHHHHHH
T ss_pred cCcCcCCeEEEEEEecCCCcCCCCCCC-CCCcccccccccc-CCCCCccccCCeEEeCCCC-CCCcEeCCccchhHHHHH
Confidence 999999999999988655432220000 0000000000011 2334457999999999985 567888889999999999
Q ss_pred HHHHhCCC
Q psy12301 407 LYTAAGGD 414 (632)
Q Consensus 407 ll~l~Gi~ 414 (632)
|-+++||+
T Consensus 369 ie~~~gLP 376 (376)
T PF04185_consen 369 IEERFGLP 376 (376)
T ss_dssp HHHHHT--
T ss_pred HHHHhCCC
Confidence 99999985
No 41
>COG1785 PhoA Alkaline phosphatase [Inorganic ion transport and metabolism]
Probab=98.25 E-value=3e-05 Score=82.03 Aligned_cols=75 Identities=17% Similarity=0.275 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy12301 249 DLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRK 328 (632)
Q Consensus 249 ~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~ 328 (632)
..+++.||+.|++. ++.|||+|-=....+- .|..+. ..-...+..+|++|...++..++.
T Consensus 283 aeMt~kAi~~L~kn--~~GFFLMVEGg~ID~a----------------~Hand~--~~~i~e~~~fd~Avq~al~fA~k~ 342 (482)
T COG1785 283 AEMTEKAIDLLSKN--KKGFFLMVEGGRIDWA----------------GHANDP--AGAIGETVAFDEAVQAALDFAEKD 342 (482)
T ss_pred HHHHHHHHHHhccC--CCceEEEEeccccchh----------------hcCcCH--HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45789999988763 4799999976655441 111111 123345778999999999999976
Q ss_pred CCCCCEEEEEEccCCCCC
Q psy12301 329 GMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 329 g~~dnTlII~tSDHG~~~ 346 (632)
.|||||+|+||-...
T Consensus 343 ---~~TLVIvTADH~tgg 357 (482)
T COG1785 343 ---GNTLVIVTADHETGG 357 (482)
T ss_pred ---CCeEEEEeccccCCc
Confidence 799999999995543
No 42
>PF00245 Alk_phosphatase: Alkaline phosphatase; InterPro: IPR001952 This entry represents alkaline phosphatases (3.1.3.1 from EC) (ALP), which act as non-specific phosphomonoesterases to hydrolyse phosphate esters, optimally at high pH. The reaction mechanism involves the attack of a serine alkoxide on a phosphorus of the substrate to form a transient covalent enzyme-phosphate complex, followed by the hydrolysis of the serine phosphate. Alkaline phosphatases are found in all kingdoms of life, with the exception of some plants. Alkaline phosphatases are metalloenzymes that exist as a dimer, each monomer binding metal ions. The metal ions they carry can differ, although zinc and magnesium are the most common. For example, Escherichia coli alkaline phosphatase (encoded by phoA) requires the presence of two zinc ions bound at the M1 and M2 metal sites, and one magnesium ion bound at the M3 site []. However, alkaline phosphatases from Thermotoga maritima and Bacillus subtilis require cobalt for maximal activity []. In mammals, there are four alkaline phosphatase isozymes: placental, placental-like (germ cell), intestinal and tissue-nonspecific (liver/bone/kidney). All four isozymes are anchored to the outer surface of the plasma membrane by a covalently attached glycosylphosphatidylinositol (GPI) anchor []. Human alkaline phosphatases have four metal binding sites: two for zinc, one for magnesium, and one for calcium ion. Placental alkaline phosphatase (ALPP or PLAP) is highly polymorphic, with at least three common alleles []. Its activity is down-regulated by a number of effectors such as l-phenylalanine, 5'-AMP, and by p-nitrophenyl-phosphonate (PNPPate) []. The placental-like isozyme (ALPPL or PLAP-like) is elevated in germ cell tumours. The intestinal isozyme (ALPI or IAP) has the ability to detoxify lipopolysaccharide and prevent bacterial invasion across the gut mucosal barrier []. The tissue-nonspecific isozyme (ALPL) is, and may play a role in skeletal mineralisation. Defects in ALPL are a cause of hypophosphatasia, including infantile-type (OMIM:241500), childhood-type (OMIM:241510) and adult-type (OMIM:146300). Hhypophosphatasia is an inherited metabolic bone disease characterised by defective skeletal mineralisation []. This entry also contains the related enzyme streptomycin-6-phosphate phosphatase (3.1.3.39 from EC) (encoded by strK) from Streptomyces species. This enzyme is involved in the synthesis of the antibiotic streptomycin, specifically cleaving both streptomycin-6-phosphate and, more slowly, streptomycin-3-phosphate [].; GO: 0016791 phosphatase activity, 0008152 metabolic process; PDB: 1AJD_B 1ALH_B 2ANH_B 3BDF_A 1ELZ_B 1ELX_B 1B8J_B 2GA3_A 1ANJ_B 1Y6V_B ....
Probab=97.96 E-value=3.4e-06 Score=90.02 Aligned_cols=75 Identities=16% Similarity=0.225 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy12301 249 DLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRK 328 (632)
Q Consensus 249 ~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~ 328 (632)
..+++.||+.|.+ .++.|||++--..... ..|..+. ..-...+..+|++|+..++..++.
T Consensus 240 ~eMt~~Al~~L~~--~~~GFfLmVEg~~ID~----------------a~H~nd~--~~~i~E~~~fD~AV~~a~~~~~~~ 299 (421)
T PF00245_consen 240 AEMTEKALEVLSK--NPKGFFLMVEGGRIDW----------------AGHANDA--ARAIEETLEFDDAVKVALDFAEKD 299 (421)
T ss_dssp HHHHHHHHHHHTT--STT-EEEEEEETHHHH----------------HHHTT-H--HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh--CCCCcEEEecccchhh----------------hhhhchH--HHHHHHHHHHHHHHHHHHHHhccC
Confidence 4689999999985 3589999986543322 1111111 223455778999999999999854
Q ss_pred CCCCCEEEEEEccCCCCC
Q psy12301 329 GMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 329 g~~dnTlII~tSDHG~~~ 346 (632)
+|||||+|+||+..+
T Consensus 300 ---~~TLiIVTADHetg~ 314 (421)
T PF00245_consen 300 ---DDTLIIVTADHETGL 314 (421)
T ss_dssp ---SSEEEEEEESSEESE
T ss_pred ---CCeEEEEEecccCcc
Confidence 999999999998773
No 43
>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional
Probab=97.80 E-value=0.00016 Score=76.89 Aligned_cols=103 Identities=17% Similarity=0.248 Sum_probs=70.6
Q ss_pred CeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 267 PLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 267 Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
.-|+++++..+.. ..+.. ....+..+|+.+|.+|++|++.|+. ++++||+|||||...
T Consensus 294 ~Dfv~vh~~~~D~----------------~GH~g--d~~~k~~aiE~iD~~l~~il~~l~~----~~~~liITaDHgtp~ 351 (412)
T PRK04024 294 YDFVLLNIKGTDE----------------AGHDG--DFEGKVEVIEKIDKMLGYILDNLDL----DEVYIAVTGDHSTPV 351 (412)
T ss_pred CCEEEEeccCcch----------------hhcCC--CHHHHHHHHHHHHHHHHHHHHHhhc----CCCEEEEecCCCCCc
Confidence 5689999888876 12212 2346888999999999999999963 467999999999864
Q ss_pred CCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCce-e---cC------ccchhhHHHHHHHHhCC
Q psy12301 347 VEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRV-S---LQ------MMHISDWLPTLYTAAGG 413 (632)
Q Consensus 347 ~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~~-~---~~------~vs~~Di~PTll~l~Gi 413 (632)
.. ..|. .-.||+||++|+....+.. . +. ...-.||++.+|.+++.
T Consensus 352 -~~---------------~~HT------~~pVP~ii~g~~v~~d~~~~f~E~~~~~g~l~~~~g~~lm~~~l~~~~~ 406 (412)
T PRK04024 352 -EV---------------KDHS------GDPVPILIYGPGVRVDDVEKFNELSAAKGGLGRIRGLDVMPILLDLMNR 406 (412)
T ss_pred -cc---------------ccCC------CCCEeEEEEcCCccCCCCCccCHHHHhCCCCCcccHHHHHHHHHHHhch
Confidence 11 1111 1249999999997532110 0 11 12346999999997765
No 44
>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.
Probab=97.43 E-value=0.011 Score=66.51 Aligned_cols=264 Identities=18% Similarity=0.106 Sum_probs=143.0
Q ss_pred cccCCCCCCCCCCcHHHHHHcccccceeeec--CCCCccceeeeccCCCCCcCccCCCCCCCC-C-----CCCCCCCCcH
Q psy12301 95 DLSFHGSNEIPTPNIDALAYNGIILNNMYAQ--PVCTPSRASLMTGKYPIHTGMQGPPIWGAE-P-----RGVPLTERFL 166 (632)
Q Consensus 95 ~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~--~~~~Psr~sllTG~~p~~~g~~~~~~~~~~-~-----~~l~~~~~tl 166 (632)
.|++|. +...|.+-.||++=+.+++.+++ .-|.|.|.-++||..........-...+.. . .......+|+
T Consensus 140 tMgYy~--r~dlPf~~aLAdaFTvcD~yf~S~~g~T~PNR~~~~sGt~~~~~~~~~~~~~n~~~~~~~~~~~~~~~w~Ti 217 (690)
T TIGR03396 140 TMGYYK--REDIPFQYALADAFTICDAYHCSVQGGTNPNRLYLWTGTNGPLGGAGGPAVTNDDDWPGIGPGEGGYTWTTY 217 (690)
T ss_pred eeeccC--ccccHHHHHHHHHhhhhhhhcccCCCCCCcCceeeEecccCCcccCCcceecCCccccccccccCCCCcCcH
Confidence 456553 66889999999999999999986 567799999999987543211000000110 0 0123456799
Q ss_pred HHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCcccccCCCCcc
Q psy12301 167 PEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEY 246 (632)
Q Consensus 167 ~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 246 (632)
+|.|.++|..=...... ..+....+ ..+|..+-. ...... + .+.+......
T Consensus 218 ~e~L~~aGVSWkvYq~~---~~n~~dnp-l~~F~~~~~-----------~~~~~~-------~-------~~~~~~~~~~ 268 (690)
T TIGR03396 218 PERLEQAGVSWKVYQDM---NDNFTDNP-LAGFKQFRN-----------ASSDNP-------G-------SPLYLGARGM 268 (690)
T ss_pred HHHHHhCCCcEEEEecC---CCccccch-hHHHHHHhh-----------hhccCC-------C-------chhhhcccCc
Confidence 99999999653332110 00000000 001111100 000000 0 0000000000
Q ss_pred chhHHHHHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q psy12301 247 ATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQ 326 (632)
Q Consensus 247 ~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~ 326 (632)
....+.++..+-++. ..=|-+.||.....+. ..|- ..+..-+..|.++++.|.
T Consensus 269 ~~~~~~~~f~~Dv~~--g~LP~VS~I~p~~~~s---eHP~----------------------~~~~~G~~~i~~vl~aL~ 321 (690)
T TIGR03396 269 STRDLLDQLRADVQA--GTLPQVSWIVAPAAYS---EHPG----------------------SSPAYGAWYVSRVLDALT 321 (690)
T ss_pred ccccHHHHHHHHHHc--CCCCeEEEEecCCCCC---CCCC----------------------CChHHHHHHHHHHHHHHH
Confidence 000111222233332 2457777775443332 0010 124466788999999999
Q ss_pred HcC-CCCCEEEEEEccCCCCCCCcccc--------cCc----CCCCCCCccc------CCCCcccCCcceeeEEEECCCC
Q psy12301 327 RKG-MLENSIIIFMSDNGAPTVEYRET--------SNY----RNWGSNYPYR------GVKNTLWEGGVKVPAILWSPQI 387 (632)
Q Consensus 327 ~~g-~~dnTlII~tSDHG~~~~g~~~~--------~~~----~~~g~~~~~~------g~k~~~~e~~~~VPlii~~P~~ 387 (632)
+.. ++++|+||||=|-..-+.++..- .+. ...+..+.+. ......+--+.|||+||..|-.
T Consensus 322 ~nP~vW~~TvliItyDE~gGffDHV~PP~~p~~~~~~~~~g~~t~~~~~e~~~~~~~~~~~~~p~GlG~RVP~iVISPws 401 (690)
T TIGR03396 322 ANPEVWSKTVLLLNYDENDGFFDHVPPPVPPSYNADGTSAGKSTLDTAGEYFDVPDPAEARGRPIGLGPRVPMYVISPWS 401 (690)
T ss_pred hChhhhhceEEEEEEeCCCCcccCcCCCCCCCcccccccccccccCCCccccccccccccccCcCCccceeeEEEECCCC
Confidence 887 59999999998866554333100 000 0000000000 0011244558999999999986
Q ss_pred CCCCceecCccchhhHHHHHHHHhCCCCCC
Q psy12301 388 QQNPRVSLQMMHISDWLPTLYTAAGGDTSR 417 (632)
Q Consensus 388 ~~~g~~~~~~vs~~Di~PTll~l~Gi~~p~ 417 (632)
++|.+.++...+.-|.-+|-..+||..+.
T Consensus 402 -rgG~V~s~~~DHtSvLrflE~~fgl~~~n 430 (690)
T TIGR03396 402 -KGGWVNSQVFDHTSVLRFLEKRFGVREPN 430 (690)
T ss_pred -CCCcccCccccHHHHHHHHHHHhCCCCcc
Confidence 46778889999999999999999998764
No 45
>PRK13759 arylsulfatase; Provisional
Probab=97.36 E-value=0.00033 Score=77.30 Aligned_cols=48 Identities=17% Similarity=0.426 Sum_probs=41.6
Q ss_pred ccchHHHHHHHHHHHcCCCCCCEEEEeeccccccCCCCcCCCCChhcHhhhcC
Q psy12301 15 YATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQY 67 (632)
Q Consensus 15 ~~t~~~~~~a~~~i~~~~~~~Pffl~l~~~a~H~~~~~~p~~~~~~~~~~y~~ 67 (632)
|.+..++++|++||++++.+|||||++++..||. |+.+|+++.++|..
T Consensus 180 ~~~~~~~~~a~~~l~~~~~~kPfFl~v~~~~pH~-----P~~~p~~~~~~y~~ 227 (485)
T PRK13759 180 HPTNWVGSESIEFLRRRDPTKPFFLKMSFARPHS-----PYDPPKRYFDMYKD 227 (485)
T ss_pred eccHHHHHHHHHHHHhCCCCCCeEEEeCCCCCcC-----CCCCCHHHHHhccc
Confidence 4566789999999986566899999999999999 99999888888764
No 46
>PF11658 DUF3260: Protein of unknown function (DUF3260); InterPro: IPR017744 This protein was identified by the partial phylogenetic profiling algorithm [] as part of the system for cellulose biosynthesis in bacteria, and in fact is found in cellulose biosynthesis gene regions. The protein was designated YhjU in Salmonella enteritidis, where disruption of its gene disrupts cellulose biosynthesis and biofilm formation [].
Probab=97.23 E-value=0.05 Score=58.05 Aligned_cols=268 Identities=15% Similarity=0.216 Sum_probs=155.5
Q ss_pred ceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeec-CCCCccceeeeccCCCC--CcCccCCCCCCCCCCC
Q psy12301 82 STTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPI--HTGMQGPPIWGAEPRG 158 (632)
Q Consensus 82 NIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~-~~~~Psr~sllTG~~p~--~~g~~~~~~~~~~~~~ 158 (632)
.||+|-+=|++||++..-|- ...|-+.++ -+.|+|+-|+ +.+.|+---+|.+..-. ++..+..
T Consensus 197 DllvlnICSLsWdDl~a~gl--~~hPl~~~F---Di~F~nFNSAtSYSGPAaIRLLRASCGQ~sH~~Ly~p--------- 262 (518)
T PF11658_consen 197 DLLVLNICSLSWDDLDAAGL--RNHPLWKRF---DIVFDNFNSATSYSGPAAIRLLRASCGQPSHSDLYQP--------- 262 (518)
T ss_pred cEEEEEecccchhhHHHhCC--ccCchHHhh---cchhcccccccccchHHHHHHHHhccCCcchHhhcCC---------
Confidence 79999999999999987663 445655543 6889998775 66778765555543221 1122111
Q ss_pred CCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCccc
Q psy12301 159 VPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLST 238 (632)
Q Consensus 159 l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 238 (632)
. ...--|.+-|+++||++..+-. |.|. ||.|.+.......- +...... .|.. ....
T Consensus 263 a-~~qC~LF~nLa~lGf~~~l~mn-HdG~-----------Fd~Fl~~ir~~G~l-~~pl~s~-------~g~~---~~~~ 318 (518)
T PF11658_consen 263 A-PQQCYLFDNLAKLGFTQQLMMN-HDGH-----------FDNFLQEIREDGGL-QAPLMSQ-------AGLP---VALH 318 (518)
T ss_pred C-cccccHHHHHHhcCCchhhccC-CCCc-----------cccHHHHHHHcCCC-CCCCcCC-------CCCc---hHhh
Confidence 1 1344689999999999887632 3332 44443211100000 0000000 0000 0000
Q ss_pred ccCCCCccchhHHHHHHHHHHHc--CCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHH
Q psy12301 239 AWDTVGEYATDLFTKEAVQLIED--QPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDD 316 (632)
Q Consensus 239 ~~~~~~~~~~~~~~~~a~~~i~~--~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~ 316 (632)
..+...-|.|..+.+ +|+++ +..+.|-.+|+++..-|. --..+.. ......+.|..-...+=+
T Consensus 319 ~FDgSpI~~D~~vL~---rW~~~r~~~~~~~~A~~YNtIsLHD-----GNr~~~~-------~~~~s~~sY~~Ra~~Lld 383 (518)
T PF11658_consen 319 SFDGSPIYDDLAVLN---RWLQQREKSDDGRVATFYNTISLHD-----GNRLPGS-------DRLNSLASYKPRAQKLLD 383 (518)
T ss_pred ccCCCcccchHHHHH---HHHHHHhhcCCCceEEEEeeeeccc-----CCccCCC-------CCcccccchHHHHHHHHH
Confidence 111122344444443 45553 345789999999999999 2222211 000112335555555666
Q ss_pred HHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCC--CCC--Cc
Q psy12301 317 SVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQI--QQN--PR 392 (632)
Q Consensus 317 ~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~--~~~--g~ 392 (632)
.+.++++.||++| .+.+||++=-||..+.|. ...+.|-...+-..-+|||.-|+.=|. ... ..
T Consensus 384 dl~~F~~~Le~Sg--R~v~vv~VPEHGAAlrGD-----------k~QiaGLReIPsP~IthvPVgiK~iG~~~~~~g~~~ 450 (518)
T PF11658_consen 384 DLDRFFDELEKSG--RKVMVVVVPEHGAALRGD-----------KMQIAGLREIPSPSITHVPVGIKFIGMKAPHQGSPV 450 (518)
T ss_pred HHHHHHHHHHHcC--CcEEEEEecCcccccccc-----------chhhccccCCCCCcceecceEEEEeccCCCCCCCCe
Confidence 7889999999999 799999999999998543 111223334555667899988865444 222 34
Q ss_pred eecCccchhhHHHHHHHHhCCCC
Q psy12301 393 VSLQMMHISDWLPTLYTAAGGDT 415 (632)
Q Consensus 393 ~~~~~vs~~Di~PTll~l~Gi~~ 415 (632)
.+++++|-+=|.--|..++..+.
T Consensus 451 ~I~~psSYLAlSeLvsr~l~~~~ 473 (518)
T PF11658_consen 451 HIDQPSSYLALSELVSRLLDGNP 473 (518)
T ss_pred EECCCchHHHHHHHHHHHhcCCC
Confidence 56888888888777777776554
No 47
>KOG4126|consensus
Probab=97.06 E-value=0.0053 Score=64.97 Aligned_cols=71 Identities=18% Similarity=0.339 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEeccCcC---CCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy12301 249 DLFTKEAVQLIEDQPVDKPLFLYLAHLA---AHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISAL 325 (632)
Q Consensus 249 ~~~~~~a~~~i~~~~~~~Pffl~~~~~~---~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L 325 (632)
..+++.|++.|.+. ++=|||+|-=.- .|+ ..+ ...-...+.+.|++|..-++..
T Consensus 328 ~eMte~Al~vL~~~--~~GffLfVEGgrID~ghH-------------------~~~--a~~aL~Et~ef~~Aiq~a~~~t 384 (529)
T KOG4126|consen 328 SEMTEKALEVLSKN--SKGFFLFVEGGRIDHGHH-------------------ETD--ARQALDETLEFDKAIQRALELT 384 (529)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEeccccccccc-------------------ccH--HHHHHHHHHHHHHHHHHHHHhc
Confidence 56899999999874 677999986522 222 011 1122345678899998888777
Q ss_pred HHcCCCCCEEEEEEccCCCCC
Q psy12301 326 QRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 326 ~~~g~~dnTlII~tSDHG~~~ 346 (632)
+. ++|+||+||||.+.+
T Consensus 385 ~~----~dTLivvTaDHsh~~ 401 (529)
T KOG4126|consen 385 SE----EDTLIVVTADHSHTF 401 (529)
T ss_pred Cc----cCCEEEEecccccce
Confidence 64 899999999999876
No 48
>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form. This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).
Probab=96.98 E-value=0.0045 Score=65.79 Aligned_cols=77 Identities=16% Similarity=0.274 Sum_probs=54.7
Q ss_pred EEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCC
Q psy12301 269 FLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVE 348 (632)
Q Consensus 269 fl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g 348 (632)
|+++++..++.. - +. .....+..+|+.+|..++++++.|++ ++.+||+|||||... .
T Consensus 290 fv~v~~~~~D~a-----G-----------H~--gd~~~k~~aIE~iD~~l~~~l~~l~~----~~~~liiTaDHgtp~-~ 346 (396)
T TIGR00306 290 FVLVHTKGPDEA-----G-----------HD--GDPELKVRAIEKIDSKIVGPLLALDL----DETRLILTADHSTPV-E 346 (396)
T ss_pred EEEEEecCCChh-----h-----------hc--CCHHHHHHHHHHHHHHHHHHHHHhhh----CCCEEEEeCCCCCCC-C
Confidence 778888777761 1 11 12355788999999999999999864 567999999999874 1
Q ss_pred cccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCC
Q psy12301 349 YRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQ 389 (632)
Q Consensus 349 ~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~ 389 (632)
. ..|. .-.||+||++|++..
T Consensus 347 ~---------------~~Ht------~~pVP~ii~g~~~~~ 366 (396)
T TIGR00306 347 V---------------KDHS------ADPVPIVIVGPGVRV 366 (396)
T ss_pred C---------------CCCC------CCCeeEEEEeCCccC
Confidence 1 1111 123999999999753
No 49
>TIGR03368 cellulose_yhjU cellulose synthase operon protein YhjU. This protein was identified by the partial phylogenetic profiling algorithm (PubMed:16930487) as part of the system for cellulose biosynthesis in bacteria, and in fact is found in cellulose biosynthesis gene regions. The protein was designated YhjU in Salmonella enteritidis, where disruption of its gene disrupts cellulose biosynthesis and biofilm formation (PubMed:11929533).
Probab=96.91 E-value=0.031 Score=59.20 Aligned_cols=266 Identities=16% Similarity=0.238 Sum_probs=148.8
Q ss_pred ceEEEEEEccCCccccCCCCCCCCCCcHHHHHHcccccceeeec-CCCCccceeeeccCCC--CCcCccCCCCCCCCCCC
Q psy12301 82 STTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYP--IHTGMQGPPIWGAEPRG 158 (632)
Q Consensus 82 NIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv~F~n~ys~-~~~~Psr~sllTG~~p--~~~g~~~~~~~~~~~~~ 158 (632)
.||+|-+=|++||++..-|- ..-|-+.++ -+.|+|+-++ +.+.|+---+|-+..- .++..+..
T Consensus 195 DllvlnICSLSWdDl~aa~l--~~hPl~~~F---DilF~nFnSAtSYSGPAaIRlLRASCGQ~~H~~LY~p--------- 260 (518)
T TIGR03368 195 DLLVLNICSLSWDDLEAAGL--RNHPLLSRF---DILFDNFNSATSYSGPAAIRLLRASCGQESHADLYDP--------- 260 (518)
T ss_pred CEEEEEeccCcHHHHHHhcC--ccCchHHhh---cchhhccccccccchHHHHHHHHhccCCcchHhhcCC---------
Confidence 79999999999999987664 334555443 5889998774 6667765444433221 11111110
Q ss_pred CCCCCCcHHHHHHhcCCceeecccCcCCCCCCCCCCCCCCCCccccccCCccCCCCccccccccccccccccccccCccc
Q psy12301 159 VPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLST 238 (632)
Q Consensus 159 l~~~~~tl~~~Lk~~GY~T~~igk~h~~~~~~~~~~~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 238 (632)
. ...--|.+-|+++||++..+-. |.|. ||.|.......... +...... .|.. ....
T Consensus 261 a-~~qCyLF~nLa~lGf~~~l~ln-HdG~-----------Fd~fl~~ir~~G~~-~~pl~~~-------~g~~---~~~~ 316 (518)
T TIGR03368 261 A-PEQCHLFSNLAKLGFTENLLLN-HDGH-----------FDNFLQLVRENGGM-QSPLMSQ-------TGLP---VAQR 316 (518)
T ss_pred c-cccchHHHHHHHcCCchhhccc-CCCc-----------cchHHHHHHHcCCC-CCCCcCc-------cCCc---HHHh
Confidence 1 1344689999999999877532 2221 55443221000000 0000000 0000 0000
Q ss_pred ccCCCCccchhHHHHHHHHHHHcC--CCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHH
Q psy12301 239 AWDTVGEYATDLFTKEAVQLIEDQ--PVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDD 316 (632)
Q Consensus 239 ~~~~~~~~~~~~~~~~a~~~i~~~--~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~ 316 (632)
..+...-|.|..+. -+|++++ ..+.|--+|+++..-|. --..+.. .......|..-...+=+
T Consensus 317 aFDGSpIy~D~~vL---~rW~~~r~~~~~~~vA~~YNtIsLHD-----GNr~~g~--------~~~s~~sY~~Ra~kLld 380 (518)
T TIGR03368 317 SFDGSPIYDDYAVL---NRWLQERLGEPDGPVALYYNTISLHD-----GNRIPNS--------GMTSLASYPLRAKKLLD 380 (518)
T ss_pred ccCCCcccchHHHH---HHHHHHhhcCCCCceEEEEeeeeccc-----CCcCCCC--------CccchhhhHHHHHHHHH
Confidence 11111223333332 3466643 34567899999999999 3332221 11223456655666666
Q ss_pred HHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECC--CCCC--CCc
Q psy12301 317 SVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSP--QIQQ--NPR 392 (632)
Q Consensus 317 ~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P--~~~~--~g~ 392 (632)
.+.++++.|+++| .+.+||+.=-||..+.|. ...+.|-...+-..-+|||.=|+.= +... ...
T Consensus 381 dld~F~~~le~Sg--R~vvVv~VPEHGAAlrGD-----------k~QisGLREIPsP~IthvPVGik~iG~~~~~~g~~~ 447 (518)
T TIGR03368 381 DLDRFFDELEKSG--RKVVVVLVPEHGAALRGD-----------KMQISGLREIPSPSITHVPVGVKFFGLGAPRRGATV 447 (518)
T ss_pred HHHHHHHHHHHcC--CcEEEEEecCcchhcccc-----------hhhhccccCCCCCcccccceEEEEeccCCCCCCCCe
Confidence 7889999999999 799999999999998543 1111223334455568988855432 2222 234
Q ss_pred eecCccchhhHHHHHHHHhCCC
Q psy12301 393 VSLQMMHISDWLPTLYTAAGGD 414 (632)
Q Consensus 393 ~~~~~vs~~Di~PTll~l~Gi~ 414 (632)
.+++++|-+=|.--|..++..+
T Consensus 448 ~I~~psSyLAlSeLvsr~v~~~ 469 (518)
T TIGR03368 448 TITAPSSYLALSELVSRLVAGS 469 (518)
T ss_pred EECCCchHHHHHHHHHHHhcCC
Confidence 5688888877777666666554
No 50
>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]
Probab=96.67 E-value=0.016 Score=59.28 Aligned_cols=99 Identities=20% Similarity=0.408 Sum_probs=65.5
Q ss_pred EEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCC
Q psy12301 269 FLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVE 348 (632)
Q Consensus 269 fl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g 348 (632)
|+++|+-.+....+ ..+. ..=...|+.+|..||.+++ |. .++++|++|+||-... .
T Consensus 299 fv~vhik~tDeagH----------------dG~~--e~Kv~~IE~iD~~i~pll~-~~----~~~~~i~vt~DHsTPv-~ 354 (408)
T COG3635 299 FVFVHIKATDEAGH----------------DGDF--EGKVRVIEDIDKAIGPLLD-LD----LDEDVIAVTGDHSTPV-S 354 (408)
T ss_pred EEEEEeccCccccC----------------CCCH--HHhHHHHHHHHHHhhhhhc-cc----cCCcEEEEeCCCCCcc-c
Confidence 88899888877211 1111 1123569999999999998 43 3899999999998775 1
Q ss_pred cccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCc-eec---------CccchhhHHHHHHHHhC
Q psy12301 349 YRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPR-VSL---------QMMHISDWLPTLYTAAG 412 (632)
Q Consensus 349 ~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~-~~~---------~~vs~~Di~PTll~l~G 412 (632)
. ..|. +--||++|+.+....... ..+ ..+.-.||++-++++++
T Consensus 355 v---------------k~Hs------~dPVPili~~~~v~~D~v~~F~E~~~~~G~Lgri~g~dlm~ill~~~~ 407 (408)
T COG3635 355 V---------------KDHS------GDPVPILIYGPYVRRDDVKRFDEFSCARGSLGRIRGSDLMPILLDLAG 407 (408)
T ss_pred c---------------cccC------CCCccEEEecCCcccCccceecHhhhhcCCcceeehHHHHHHHHHhhc
Confidence 1 1111 235999999998532210 011 14567899999999986
No 51
>TIGR02535 hyp_Hser_kinase proposed homoserine kinase. The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.
Probab=96.35 E-value=0.027 Score=59.96 Aligned_cols=58 Identities=22% Similarity=0.396 Sum_probs=42.3
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECC
Q psy12301 307 YAAMVKKLDDS-VGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSP 385 (632)
Q Consensus 307 Y~~~i~~~D~~-iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P 385 (632)
-..+|+.+|.. ++.|++.|++.| ++++||+|||||.... . ..|. .--||+||+++
T Consensus 307 kv~aIE~lD~~~~~~ll~al~~~~--~~~~~~vt~DH~tp~~-~---------------~~Ht------~~pVP~ii~g~ 362 (396)
T TIGR02535 307 KIKAIELIDSRIVGPLLEALSDRD--EPFRILVLPDHPTPLE-L---------------KTHT------AEPVPFLLYGK 362 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEEeeeCccCCC-C---------------CccC------CCCEeEEEEeC
Confidence 44679999997 668999997655 4669999999997541 1 1111 24699999999
Q ss_pred CCC
Q psy12301 386 QIQ 388 (632)
Q Consensus 386 ~~~ 388 (632)
+..
T Consensus 363 ~~~ 365 (396)
T TIGR02535 363 GIE 365 (396)
T ss_pred CcC
Confidence 864
No 52
>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional
Probab=96.34 E-value=0.023 Score=60.44 Aligned_cols=79 Identities=19% Similarity=0.371 Sum_probs=52.7
Q ss_pred eEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 268 LFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDS-VGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 268 ffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~-iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
-|+++++-.+... -.. . ....-..+|+.+|+. ++.|++.|++. ++.+||+|||||...
T Consensus 285 DfV~vh~~~~D~a-----GH~-----------g--d~~~kv~aiE~lD~~~~~~ll~al~~~---~~~~l~it~DH~tp~ 343 (395)
T PRK04200 285 DFVFVHVEAPDEA-----GHE-----------G--DLEAKIKAIEDIDERVVGPILEALKKY---EDYRILVLPDHPTPI 343 (395)
T ss_pred CEEEEEecCcchh-----hcc-----------C--CHHHHHHHHHHHHHHhHHHHHHHHHhc---CCCEEEEeccCCcCC
Confidence 4888888887761 111 1 122234679999998 66899999752 467999999999754
Q ss_pred CCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCC
Q psy12301 347 VEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQ 389 (632)
Q Consensus 347 ~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~ 389 (632)
.. ..|. .--||+||++++...
T Consensus 344 -~~---------------~~Ht------~~pVP~ii~g~~~~~ 364 (395)
T PRK04200 344 -EL---------------KTHT------ADPVPFLIYGEGIEP 364 (395)
T ss_pred -CC---------------CccC------CCCEeEEEEcCCcCC
Confidence 11 1111 235999999998753
No 53
>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional
Probab=96.27 E-value=0.041 Score=57.96 Aligned_cols=99 Identities=16% Similarity=0.223 Sum_probs=64.0
Q ss_pred eEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCC
Q psy12301 268 LFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTV 347 (632)
Q Consensus 268 ffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~ 347 (632)
-|+++|+..+... .+..+. ..=..+|+.+|..|..|+ .| ++++||+||||+....
T Consensus 281 DfV~vhvk~~Dea----------------GH~gd~--~~Kv~~IE~iD~~l~~ll-~l------~~~~ivVT~DH~TP~~ 335 (395)
T PRK04135 281 DFFFLHVKKTDSY----------------GEDGNF--EEKVKVIEEVDALLPEIL-AL------KPDVLVITGDHSTPAV 335 (395)
T ss_pred CEEEEEeccCchh----------------hccCCH--HHHHHHHHHHHHHHHHHh-cC------CCcEEEEeCCCCCccc
Confidence 3888888888761 111111 223366999999999888 55 3459999999998761
Q ss_pred CcccccCcCCCCCCCcccCCCCcccCCcceeeEEEECCCCCCCCc-eec---------CccchhhHHHHHHHHhCC
Q psy12301 348 EYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPR-VSL---------QMMHISDWLPTLYTAAGG 413 (632)
Q Consensus 348 g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~~P~~~~~g~-~~~---------~~vs~~Di~PTll~l~Gi 413 (632)
. +.|. .--||++|++++....+. ..+ ....-.||++.+|.+++.
T Consensus 336 ~----------------~~Hs------~dPVP~li~g~~~~~D~v~~F~E~~~~~G~L~~~~G~~lm~~~l~~~~~ 389 (395)
T PRK04135 336 L----------------KGHS------WHPVPLLLYSKYCRPDLSQRFTERECARGGLGHIPAVDLMPLALAHALR 389 (395)
T ss_pred c----------------cccC------CCCEeEEEEcCCCCCCCCCccCHHHHcCCCcCcccHHHHHHHHHHhhhh
Confidence 1 1111 235999999998753210 001 134578999999987764
No 54
>KOG3867|consensus
Probab=95.80 E-value=0.013 Score=63.67 Aligned_cols=95 Identities=20% Similarity=0.172 Sum_probs=76.6
Q ss_pred ccccCCCCcccchHHHHHHHHHHHcC-CCCCCEEEEeeccccccCCCCcCCCCChhcHhhhcCcCCchhhhhhhc-----
Q psy12301 6 STAWDTVGEYATDLFTKEAVQLIEDQ-PVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAL----- 79 (632)
Q Consensus 6 ~~~~~~~~~~~t~~~~~~a~~~i~~~-~~~~Pffl~l~~~a~H~~~~~~p~~~~~~~~~~y~~~~~~~~~~~a~~----- 79 (632)
.+.......++|+++++.++..|+.+ ..++|||+++++.++|......|++++.+.......+..+.++.|+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~l~v~~p~~~~~~f~~~s~~~~y~~~V~~mD 279 (528)
T KOG3867|consen 200 HVPHRPGWYSSTGLPTFGACYLMRNHGLSEQPMFLYWAPPAAHKEAMDSPLHVHVPLFTPKTFAGRSKRGLYGDMVSEMD 279 (528)
T ss_pred ccccccCCccccccccchhhhhhhccCcCCCCceeeccchhhcccccccccccCccccCCccccchhhhhHHHHHHHHHH
Confidence 34445567788999999999999876 567999999999999997777778888877777777777888888877
Q ss_pred ---------------cCceEEEEEEccCCccccCCC
Q psy12301 80 ---------------TKSTTLTLLIVYGWNDLSFHG 100 (632)
Q Consensus 80 ---------------~pNIvlI~~D~~r~d~l~~~G 100 (632)
..|.|+|++-|.++...+..+
T Consensus 280 ~~VG~ildaL~~~gl~nnTiv~FtSDnG~~~~~~~~ 315 (528)
T KOG3867|consen 280 WSVGRILDALDDLGLANNTLVIFTSDNGGPLEGGRG 315 (528)
T ss_pred HHHHHHHHHHHHhCcccCeEEEEeCCCCccccCccc
Confidence 568999999888877666543
No 55
>TIGR03417 chol_sulfatase choline-sulfatase.
Probab=95.70 E-value=0.012 Score=65.15 Aligned_cols=46 Identities=15% Similarity=0.146 Sum_probs=39.2
Q ss_pred chHHHHHHHHHHHc---CCCCCCEEEEeeccccccCCCCcCCCCChhcHhhhcC
Q psy12301 17 TDLFTKEAVQLIED---QPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQY 67 (632)
Q Consensus 17 t~~~~~~a~~~i~~---~~~~~Pffl~l~~~a~H~~~~~~p~~~~~~~~~~y~~ 67 (632)
.+.++++|++||.+ ++.+|||||+++|..||. |+.+|+++.++|..
T Consensus 162 ~~~~~~~a~~~l~~~~~~~~~kPFFl~vs~~~PH~-----P~~~p~~y~~~y~~ 210 (500)
T TIGR03417 162 DDEVAFHARQKLYDLARGKDARPFCLTVSFTHPHD-----PYVIRRKYWDLYED 210 (500)
T ss_pred CHHHHHHHHHHHHHHhhccCCCCeEEEecCCCCcC-----CCcCCHHHHhhcCc
Confidence 34679999999964 356799999999999999 99999998888865
No 56
>PF07394 DUF1501: Protein of unknown function (DUF1501); InterPro: IPR010869 This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.
Probab=95.67 E-value=0.043 Score=58.89 Aligned_cols=96 Identities=18% Similarity=0.286 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCCCCcccccCcCCCCCCCcccCCCCcccCCcceeeEEEE
Q psy12301 304 RRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILW 383 (632)
Q Consensus 304 ~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~~g~~~~~~~~~~g~~~~~~g~k~~~~e~~~~VPlii~ 383 (632)
.......+..+|+.|..|++.|++.|++|+|+||++||=|-....... .|.++|| .--+++|.
T Consensus 263 ~~~~~~ll~~L~~alaaf~~dL~~~g~~d~t~vv~~SEFGRt~~~N~~-~GtDH~g----------------~g~~~~v~ 325 (392)
T PF07394_consen 263 GNRHARLLPELDQALAAFIQDLKERGLLDDTLVVTMSEFGRTPRENGS-GGTDHWG----------------WGGSMLVA 325 (392)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhcCCcCceEEEEeeecCCCcccCCC-CCCCCCC----------------CcceEEEe
Confidence 344677789999999999999999999999999999999988732200 0111111 11234444
Q ss_pred CCCCCCC----------CceecCccchhhHHHHHHHHhCCCCC
Q psy12301 384 SPQIQQN----------PRVSLQMMHISDWLPTLYTAAGGDTS 416 (632)
Q Consensus 384 ~P~~~~~----------g~~~~~~vs~~Di~PTll~l~Gi~~p 416 (632)
+.++... ....+..++.-|+..|++..+|++..
T Consensus 326 GGgv~gG~v~G~~p~l~~~~~~~~~~~~dl~~t~~~~~~~d~~ 368 (392)
T PF07394_consen 326 GGGVKGGRVYGETPSLGEDPLDNPVSPRDLYATRLLPLGIDPR 368 (392)
T ss_pred CCCcCCCcEeCCCCCcccccccCCcChhhccCCeeeccccChH
Confidence 4443211 12235667788999999999998763
No 57
>KOG3731|consensus
Probab=95.31 E-value=0.02 Score=59.62 Aligned_cols=51 Identities=22% Similarity=0.458 Sum_probs=42.5
Q ss_pred CcccchHHHHHHHHHHHcCC---CCCCEEEEeeccccccCCCCcCCCCChhcHhhhcCc
Q psy12301 13 GEYATDLFTKEAVQLIEDQP---VDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYI 68 (632)
Q Consensus 13 ~~~~t~~~~~~a~~~i~~~~---~~~Pffl~l~~~a~H~~~~~~p~~~~~~~~~~y~~~ 68 (632)
-.|.||+++..++.|++..+ .-+||||.++|.|||. |+..++.|...|...
T Consensus 181 kdyltDlitn~s~~ff~~s~~~~~~~Pf~l~is~~aPHg-----ped~apQf~~~F~n~ 234 (541)
T KOG3731|consen 181 KDYLTDLITNDSLLFFDGSKKRHSQEPFFLAISFPAPHG-----PEDSAPQFSHLFNNV 234 (541)
T ss_pred hhhhchhhhhhhHHHHhhccccccCCCeEEEeccCCCCC-----CCCccHHHHHhcccc
Confidence 34899999999999997533 3699999999999999 898888887776554
No 58
>PF00884 Sulfatase: Sulfatase; InterPro: IPR000917 Sulphatases 3.1.6. from EC are enzymes that hydrolyze various sulphate esters. The sequence of different types of sulphatases are available and have shown to be structurally related [, , ]; these include: arylsulphatase A 3.1.6.8 from EC (ASA), a lysosomal enzyme which hydrolyses cerebroside sulphate; arylsulphatase B 3.1.6.12 from EC (ASB), which hydrolyses the sulphate ester group from N-acetylgalactosamine 4-sulphate residues of dermatan sulphate; arylsulphatase C (ASD) and E (ASE); steryl-sulphatase 3.1.6.2 from EC (STS), a membrane bound microsomal enzyme which hydrolyses 3-beta-hydroxy steroid sulphates; iduronate 2-sulphatase precursor 3.1.6.13 from EC (IDS), a lysosomal enzyme that hydrolyses the 2-sulphate groups from non-reducing-terminal iduronic acid residues in dermatan sulphate and heparan sulphate; N-acetylgalactosamine-6-sulphatase 3.1.6.4 from EC, which hydrolyses the 6-sulphate groups of the N-acetyl-d-galactosamine 6-sulphate units of chondroitin sulphate and the D-galactose 6-sulphate units of keratan sulphate; glucosamine-6-sulphatase 3.1.6.14 from EC (G6S), which hydrolyses the N-acetyl-D-glucosamine 6-sulphate units of heparan sulphate and keratan sulphate; N-sulphoglucosamine sulphohydrolase 3.10.1.1 from EC (sulphamidase), the lysosomal enzyme that catalyses the hydrolysis of N-sulpho-d-glucosamine into glucosamine and sulphate; sea urchin embryo arylsulphatase 3.1.6.1 from EC; green algae arylsulphatase 3.1.6.1 from EC, which plays an important role in the mineralisation of sulphates; and arylsulphatase 3.1.6.1 from EC from Escherichia coli (aslA), Klebsiella aerogenes (gene atsA) and Pseudomonas aeruginosa (gene atsA). ; GO: 0008484 sulfuric ester hydrolase activity, 0008152 metabolic process; PDB: 1P49_A 1FSU_A 2QZU_A 2W5Q_A 2W5T_A 2W5S_A 2W5R_A 3LXQ_A 1HDH_B 1E33_P ....
Probab=93.42 E-value=0.23 Score=50.81 Aligned_cols=49 Identities=22% Similarity=0.531 Sum_probs=38.2
Q ss_pred cccchHHHHHHHHHHHcCCCCCCEEEEeeccccccCCCCcCCCCChhcHhhhcCc
Q psy12301 14 EYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYI 68 (632)
Q Consensus 14 ~~~t~~~~~~a~~~i~~~~~~~Pffl~l~~~a~H~~~~~~p~~~~~~~~~~y~~~ 68 (632)
.+..+.+.++++++|.+.+ +||||+++.+..+|. |+..++++..++...
T Consensus 150 ~~~d~~~~~~~~~~l~~~~-~~p~f~~~~~~~~H~-----P~~~~~~~~~~~~~~ 198 (308)
T PF00884_consen 150 GYSDDALFDYAIDFLLNED-DKPFFLFIHTMGPHG-----PYPYPPDYAEKFPKF 198 (308)
T ss_dssp CEHHHHHHHHHHHHHHCTT-TSSEEEEEEE-TTSS-----STCTTCCHHHGGTTC
T ss_pred cccchhhhhhhhhhhhhcc-cccceeEEeeccccc-----ccccccccccccccc
Confidence 3556778999999984344 999999999999999 887777776666543
No 59
>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]
Probab=90.04 E-value=0.46 Score=48.96 Aligned_cols=62 Identities=26% Similarity=0.241 Sum_probs=39.8
Q ss_pred cCceEEEEEEccCCccccCCCC----CCCCCCcHHHHHHccccc-ceeeec---CCCCccceeeeccCCCC
Q psy12301 80 TKSTTLTLLIVYGWNDLSFHGS----NEIPTPNIDALAYNGIIL-NNMYAQ---PVCTPSRASLMTGKYPI 142 (632)
Q Consensus 80 ~pNIvlI~~D~~r~d~l~~~G~----~~~~TPnld~La~~Gv~F-~n~ys~---~~~~Psr~sllTG~~p~ 142 (632)
+..||+|+.|+++-.-++-.++ +...|||||+||++|+.= -..+.. |-+-+++-||| |..|.
T Consensus 3 ~~killiv~DGlgDrP~~~l~gkTpLq~A~tPNmD~LA~~g~~Gl~~~i~pGi~pGSd~ahLsl~-GYDP~ 72 (408)
T COG3635 3 KMKILLIVLDGLGDRPVEELDGKTPLQAAKTPNMDRLAKEGICGLMDPIKPGIRPGSDTAHLSLF-GYDPY 72 (408)
T ss_pred cceEEEEEecCCCCCcccccCCCCchhhcCCCCHHHHHhcCCcccccccCCCCCCCCCcceeeee-ccCcc
Confidence 4679999999998655554433 245899999999999763 333332 33445555543 33333
No 60
>PRK03776 phosphoglycerol transferase I; Provisional
Probab=83.93 E-value=2.2 Score=48.92 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=29.8
Q ss_pred ccchHHHHHHHHHHHc-CCCCCCEEEEeeccccccC
Q psy12301 15 YATDLFTKEAVQLIED-QPVDKPLFLYLAHLAAHAG 49 (632)
Q Consensus 15 ~~t~~~~~~a~~~i~~-~~~~~Pffl~l~~~a~H~~ 49 (632)
+..+.+.++|++++++ .+.+||||+++.+...|.+
T Consensus 303 ~~Dd~Lfd~A~e~l~eLsk~~kPFfl~llTlstH~P 338 (762)
T PRK03776 303 FYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHP 338 (762)
T ss_pred cCcHHHHHHHHHHHHHhhcCCCCEEEEecCCCCcCC
Confidence 5678899999998865 3567999999999999993
No 61
>COG3379 Uncharacterized conserved protein [Function unknown]
Probab=81.70 E-value=2 Score=44.71 Aligned_cols=24 Identities=21% Similarity=0.158 Sum_probs=20.7
Q ss_pred cCccchhhHHHHHHHHhCCCCCCC
Q psy12301 395 LQMMHISDWLPTLYTAAGGDTSRL 418 (632)
Q Consensus 395 ~~~vs~~Di~PTll~l~Gi~~p~~ 418 (632)
..-+++.|++||||.|.|++.|..
T Consensus 436 ~~s~~IyDvaPTIL~L~gi~~~~~ 459 (471)
T COG3379 436 QSSVSIYDVAPTILKLYGINCPSD 459 (471)
T ss_pred ccceeeEeechHHHHHhCCCCCcc
Confidence 456799999999999999998763
No 62
>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional
Probab=81.52 E-value=1.6 Score=46.14 Aligned_cols=38 Identities=26% Similarity=0.166 Sum_probs=29.8
Q ss_pred CceEEEEEEccCCccccCCCCC----CCCCCcHHHHHHccccc
Q psy12301 81 KSTTLTLLIVYGWNDLSFHGSN----EIPTPNIDALAYNGIIL 119 (632)
Q Consensus 81 pNIvlI~~D~~r~d~l~~~G~~----~~~TPnld~La~~Gv~F 119 (632)
..+|||++|+++-.-+.. |+. ...|||||+||++|+.-
T Consensus 8 ~K~v~ii~DGmgD~p~~e-~gkTPLe~A~tPnlD~lA~~G~~G 49 (395)
T PRK04135 8 SKIVLLVLDGLGGLPHPE-NGKTELEAAKTPNLDALAKESDLG 49 (395)
T ss_pred CcEEEEEecCCCCCCCCC-CCCChhhccCCCChHHHHHcCCcc
Confidence 468999999998655555 542 45899999999999764
No 63
>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional
Probab=80.40 E-value=2 Score=46.18 Aligned_cols=38 Identities=32% Similarity=0.313 Sum_probs=29.1
Q ss_pred ceEEEEEEccCCccccCCCCC----CCCCCcHHHHHHccccc
Q psy12301 82 STTLTLLIVYGWNDLSFHGSN----EIPTPNIDALAYNGIIL 119 (632)
Q Consensus 82 NIvlI~~D~~r~d~l~~~G~~----~~~TPnld~La~~Gv~F 119 (632)
.+|+|++|+++-.-+...|+. ...|||||+||++|+.-
T Consensus 4 k~v~~i~DG~~D~p~~~l~gkTpLe~A~tPnlD~lA~~g~~G 45 (412)
T PRK04024 4 KILLIILDGLGDRPVKELGGKTPLEAANTPNMDKLAKEGICG 45 (412)
T ss_pred cEEEEEecCCCCCcccccCCCChhhccCCCChHHHHHcCCcc
Confidence 689999999985554444442 45899999999999753
No 64
>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional
Probab=80.07 E-value=1.7 Score=46.33 Aligned_cols=39 Identities=18% Similarity=0.124 Sum_probs=29.1
Q ss_pred ceEEEEEEccCCccccCCCCC----CCCCCcHHHHHHcccccc
Q psy12301 82 STTLTLLIVYGWNDLSFHGSN----EIPTPNIDALAYNGIILN 120 (632)
Q Consensus 82 NIvlI~~D~~r~d~l~~~G~~----~~~TPnld~La~~Gv~F~ 120 (632)
.+|||++|+++-.-+...|+. ...|||||+||++|+..-
T Consensus 2 k~v~~i~DG~~D~p~~~l~gkTpLe~A~tP~lD~lA~~g~~Gl 44 (395)
T PRK04200 2 KYIILIGDGMADEPIEELGGKTPLQAAKTPNMDKMAREGRVGL 44 (395)
T ss_pred CEEEEEecCCCCCcccccCCCCccceeCCCchHHHHhcCCccc
Confidence 489999999985544444442 358999999999997653
No 65
>TIGR02535 hyp_Hser_kinase proposed homoserine kinase. The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.
Probab=79.81 E-value=1.8 Score=46.18 Aligned_cols=38 Identities=24% Similarity=0.070 Sum_probs=28.6
Q ss_pred ceEEEEEEccCCccccCCCC----CCCCCCcHHHHHHccccc
Q psy12301 82 STTLTLLIVYGWNDLSFHGS----NEIPTPNIDALAYNGIIL 119 (632)
Q Consensus 82 NIvlI~~D~~r~d~l~~~G~----~~~~TPnld~La~~Gv~F 119 (632)
.+|||++|+++-.-+...|+ +...|||||+||++|+..
T Consensus 2 k~v~~i~DG~~D~p~~~l~gkTpLe~A~tP~lD~lA~~g~~G 43 (396)
T TIGR02535 2 KYIILIGDGMADWPLEELGGRTPLQVANTPNMDKLAKRGRCG 43 (396)
T ss_pred CEEEEEecCCCCCcccccCCCChhhccCCCcHHHHHhcCCCc
Confidence 48999999998554433344 245899999999999764
No 66
>PF08665 PglZ: PglZ domain; InterPro: IPR013973 This entry is a member of the Alkaline phosphatase clan.
Probab=75.57 E-value=3.7 Score=38.76 Aligned_cols=53 Identities=21% Similarity=0.218 Sum_probs=34.9
Q ss_pred ceEEEEEEccCCccccCCCCCCCCCCcHHHHHHccc-ccc--eeeec--CCCCccceeeeccCCCCC
Q psy12301 82 STTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGI-ILN--NMYAQ--PVCTPSRASLMTGKYPIH 143 (632)
Q Consensus 82 NIvlI~~D~~r~d~l~~~G~~~~~TPnld~La~~Gv-~F~--n~ys~--~~~~Psr~sllTG~~p~~ 143 (632)
-|+||++|++|++.-.. -...|.+++. .++ -+++. ++|.-||+|||+|..|..
T Consensus 2 kv~liv~Dgmrye~~~e---------L~~~L~~~~~~~~~~~~~~a~LPS~T~~sr~ALl~g~~~~~ 59 (181)
T PF08665_consen 2 KVALIVSDGMRYEQARE---------LAESLSREGWFEVELDPALAWLPSITEVSRAALLPGKLPRY 59 (181)
T ss_pred eEEEEEEcCCCHHHHHH---------HHHHHhhccCcceeeeeeeEeccchhHHHHHHHcCCCChhh
Confidence 48999999999864321 1234444443 232 34553 557789999999998853
No 67
>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form. This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).
Probab=74.69 E-value=2.9 Score=44.68 Aligned_cols=36 Identities=28% Similarity=0.218 Sum_probs=26.4
Q ss_pred EEEEEEccCCccccCCCC----CCCCCCcHHHHHHccccc
Q psy12301 84 TLTLLIVYGWNDLSFHGS----NEIPTPNIDALAYNGIIL 119 (632)
Q Consensus 84 vlI~~D~~r~d~l~~~G~----~~~~TPnld~La~~Gv~F 119 (632)
|+|++|+++-.-+...|+ +...|||||+||++|+.-
T Consensus 1 v~~i~DG~~D~p~~~l~gkTpLe~A~tPnlD~lA~~g~~G 40 (396)
T TIGR00306 1 VLIIIDGLADRPLEELDGKTPLQVAKTPNMDRLAEEGICG 40 (396)
T ss_pred CEEEecCCCCCcccccCCCCchhccCCCChHHHHhcCCee
Confidence 688999998544433344 245899999999999764
No 68
>PRK12363 phosphoglycerol transferase I; Provisional
Probab=70.33 E-value=7.9 Score=44.31 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=29.5
Q ss_pred ccchHHHHHHHHHHHcC-CCCCCEEEEeeccccccC
Q psy12301 15 YATDLFTKEAVQLIEDQ-PVDKPLFLYLAHLAAHAG 49 (632)
Q Consensus 15 ~~t~~~~~~a~~~i~~~-~~~~Pffl~l~~~a~H~~ 49 (632)
+..+.+.++|+++|++. +.+||||+++.+...|.+
T Consensus 300 l~Dd~lfd~A~~~Le~Ls~~~qPFfl~llTvsnH~P 335 (703)
T PRK12363 300 VHDDVLLDDAYDEFETLSRAGQPFMLTTLTMDTHHP 335 (703)
T ss_pred cccHHHHHHHHHHHHhhhccCCCEEEEeeCCCCCCC
Confidence 35678899999999753 557999999999999994
No 69
>PF08665 PglZ: PglZ domain; InterPro: IPR013973 This entry is a member of the Alkaline phosphatase clan.
Probab=66.96 E-value=0.87 Score=43.02 Aligned_cols=26 Identities=23% Similarity=0.425 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 317 SVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 317 ~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
.|.++|..|.+.| .-||+|||||...
T Consensus 151 ~L~~li~~l~~~~----~~V~ITsDHG~v~ 176 (181)
T PF08665_consen 151 ELRSLIKELRNAG----RRVVITSDHGFVY 176 (181)
T ss_pred HHHHHHHHHHhcC----ceEEEECCCCCEE
Confidence 6667777777764 5799999999875
No 70
>COG4102 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.78 E-value=44 Score=34.45 Aligned_cols=60 Identities=13% Similarity=0.174 Sum_probs=39.4
Q ss_pred CCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEEEEccCC
Q psy12301 265 DKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKG-MLENSIIIFMSDNG 343 (632)
Q Consensus 265 ~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g-~~dnTlII~tSDHG 343 (632)
.+-+++-+.-.++|.. -. ..-......++..++-|=..+.+.| .++||+|+..|+-|
T Consensus 268 p~vaalsl~gfDTH~n-----q~-----------------~aq~~La~ql~~~da~l~a~~t~lG~~w~dt~i~t~tEFg 325 (418)
T COG4102 268 PQVAALSLGGFDTHAN-----QN-----------------DAQGRLATQLGGLDAALDAFETELGARWKDTVIVTATEFG 325 (418)
T ss_pred ceEEEEeecCcccccc-----cc-----------------chhhHHHHHhcchHHHHHHHHhhccccccceEEEEeeccc
Confidence 3557788888899981 10 0011234445555555555566777 78999999999999
Q ss_pred CCC
Q psy12301 344 APT 346 (632)
Q Consensus 344 ~~~ 346 (632)
...
T Consensus 326 Rta 328 (418)
T COG4102 326 RTA 328 (418)
T ss_pred cce
Confidence 876
No 71
>TIGR02687 conserved hypothetical protein TIGR02687. Members of this family are uncharacterized proteins sporadically distributed in bacteria and archaea, about 880 amino acids in length. This protein is repeatedly found upstream of another uncharacterized protein of about 470 amino acids in length, modeled by TIGR02688.
Probab=57.47 E-value=14 Score=43.67 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 306 TYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 306 ~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
....++..++..|++|++.|. -+.||+|||||...
T Consensus 596 a~~~~l~el~~~v~~l~~~l~------~~~i~iTADHGfi~ 630 (844)
T TIGR02687 596 AVEETIVELKKLVKYLINRLN------GTNIIVTADHGFLY 630 (844)
T ss_pred HHHHHHHHHHHHHHHHHHhcC------CcEEEEECCCcccc
Confidence 466778888888888888774 35999999999987
No 72
>COG3083 Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only]
Probab=53.36 E-value=19 Score=38.97 Aligned_cols=75 Identities=19% Similarity=0.152 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEeeccccccCCCCcCCCCC--hhcHhhhcCcCCc---------hhhhhhhccCceEEEE
Q psy12301 19 LFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAP--QETINQFQYITDP---------NRRTYAALTKSTTLTL 87 (632)
Q Consensus 19 ~~~~~a~~~i~~~~~~~Pffl~l~~~a~H~~~~~~p~~~~--~~~~~~y~~~~~~---------~~~~~a~~~pNIvlI~ 87 (632)
-.++....|++.++.|+|||.|+.+..+|+......-+++ +++.++|...... +.-.-.....|-|+|+
T Consensus 377 ~~t~~~~wf~~~~~~d~PwFs~L~l~~~~~~~~~~s~q~~~~~~~~~~Y~~a~~~vD~~I~~vLe~L~~~~~L~NTvVII 456 (600)
T COG3083 377 RATQWLLWFGRYRDEDNPWFSYLSLNSSHANDDPSSNQAKARPPFKNRYQNALREVDSQIGRVLEQLRNSGLLDNTVVII 456 (600)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcccccceEEEE
Confidence 3456666666667889999999999999986432212221 2366666542110 0111223456888888
Q ss_pred EEccCC
Q psy12301 88 LIVYGW 93 (632)
Q Consensus 88 ~D~~r~ 93 (632)
+-+.|.
T Consensus 457 Ts~HG~ 462 (600)
T COG3083 457 TADHGE 462 (600)
T ss_pred ECCCCc
Confidence 776654
No 73
>PRK13366 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=52.39 E-value=17 Score=37.03 Aligned_cols=34 Identities=6% Similarity=-0.002 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 311 VKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 311 i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
...+...+.++-+.|++.+ -+|+|||.+||+..+
T Consensus 30 ~~~~~~a~~~i~~~i~~~~--PDvvVii~~dH~~~f 63 (284)
T PRK13366 30 WQPVFKGYEFSKQWEKEEK--PDVIFLVYNDHATAF 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhC--CCEEEEEcCCcHHhh
Confidence 4466667777777777665 799999999998776
No 74
>PF05991 NYN_YacP: YacP-like NYN domain; InterPro: IPR010298 This family consists of several hypothetical bacterial proteins as well as some uncharacterised sequences from Arabidopsis thaliana. The function of this family is unknown.
Probab=38.86 E-value=26 Score=32.53 Aligned_cols=32 Identities=16% Similarity=0.336 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 312 KKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 312 ~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
..+|..|.+++..+.+.+ ..++|+||||....
T Consensus 77 ~tAD~~Ie~~v~~~~~~~---~~v~VVTSD~~iq~ 108 (166)
T PF05991_consen 77 ETADDYIERLVRELKNRP---RQVTVVTSDREIQR 108 (166)
T ss_pred CCHHHHHHHHHHHhccCC---CeEEEEeCCHHHHH
Confidence 478999999999988644 78999999998764
No 75
>cd00016 alkPPc Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity.
Probab=38.37 E-value=40 Score=35.94 Aligned_cols=31 Identities=13% Similarity=0.198 Sum_probs=24.6
Q ss_pred cchHHHHHHHHHHHcCCCCCCEEEEeecccccc
Q psy12301 16 ATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHA 48 (632)
Q Consensus 16 ~t~~~~~~a~~~i~~~~~~~Pffl~l~~~a~H~ 48 (632)
.-..+++.|+++|++ .+++|||++....++.
T Consensus 232 sL~emt~~al~~L~~--~~~gFfl~ve~~~iD~ 262 (384)
T cd00016 232 SLAEMTEKAIDVLSK--NPNGFFLMVEGGRIDH 262 (384)
T ss_pred CHHHHHHHHHHHHHh--cCCcEEEEEeCCCCCc
Confidence 346689999999963 3589999999876666
No 76
>cd07369 PydA_Rs_like PydA is a Class III Extradiol ring-cleavage dioxygenase required for the degradation of 3-hydroxy-4-pyridone (HP). This subfamily is composed of Rhizobium sp. PydA and similar proteins. PydA is required for the degradation of 3-hydroxy-4-pyridone (HP), an intermediate in the Leucaena toxin mimosine degradation pathway. It is a member of the class III extradiol dioxygenase family, a group of enzymes that use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=37.73 E-value=47 Score=34.52 Aligned_cols=34 Identities=15% Similarity=0.184 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 311 VKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 311 i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
+..+-..+.++-+.+++.+ -+|+|||.+||+..+
T Consensus 28 ~~~~~~a~~~l~~~v~~~~--PD~iVV~~sdH~~~~ 61 (329)
T cd07369 28 RARTEEATLKLGRTLTAAR--PDVIIAFLDDHFENH 61 (329)
T ss_pred HHHHHHHHHHHHHHHHHhC--CCEEEEEcCCchhhh
Confidence 3455556666666666654 789999999998843
No 77
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=34.02 E-value=1.9e+02 Score=27.51 Aligned_cols=50 Identities=16% Similarity=0.261 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q psy12301 253 KEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLE 332 (632)
Q Consensus 253 ~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~d 332 (632)
+..++.+++ .+|-++.++...++. + ..+.++++.|++.|..+
T Consensus 125 e~~v~~~~~---~~pd~v~lS~~~~~~-------------------------------~----~~~~~~i~~l~~~~~~~ 166 (197)
T TIGR02370 125 DTVVEKVKK---EKPLMLTGSALMTTT-------------------------------M----YGQKDINDKLKEEGYRD 166 (197)
T ss_pred HHHHHHHHH---cCCCEEEEccccccC-------------------------------H----HHHHHHHHHHHHcCCCC
Confidence 444555554 468888888776665 1 12578999999999888
Q ss_pred CEEEEEEc
Q psy12301 333 NSIIIFMS 340 (632)
Q Consensus 333 nTlII~tS 340 (632)
+..|++.+
T Consensus 167 ~v~i~vGG 174 (197)
T TIGR02370 167 SVKFMVGG 174 (197)
T ss_pred CCEEEEEC
Confidence 88877754
No 78
>PRK13364 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=33.63 E-value=48 Score=33.63 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 311 VKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 311 i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
...+.+.+.++-+.+++.. -+++|||++||+..+
T Consensus 30 ~~~v~~a~~~~~~~v~~~~--PDvvVvis~dH~~~f 63 (278)
T PRK13364 30 WKPFFDGFPPVREWLEKVK--PDVAVVFYNDHGLNF 63 (278)
T ss_pred HHHHHHHHHHHHHHHHHhC--CCEEEEECCchHhhh
Confidence 4466677777777777754 789999999999985
No 79
>cd07364 PCA_45_Dioxygenase_B Subunit B of the Class III extradiol dioxygenase, Protocatechuate 4,5-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of protocatechuate. Protocatechuate 4,5-dioxygenase (LigAB) catalyzes the oxidization and subsequent ring-opening of protocatechuate (or 3,4-dihydroxybenzoic acid, PCA), an intermediate in the breakdown of lignin and other compounds. Protocatechuate 4,5-dioxygenase is an aromatic ring opening dioxygenase belonging to the class III extradiol enzyme family, a group of enyzmes that cleaves aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon using a non-heme Fe(II). LigAB is composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. The B subunit (LigB) is the catalytic subunit of LigAB.
Probab=32.71 E-value=54 Score=33.24 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 313 KLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 313 ~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
.+.+.+.++-+.|++.+ -+|+|||.+||...+
T Consensus 32 ~~~~a~~~~~~~~~~~~--pD~vVvi~~dH~~~f 63 (277)
T cd07364 32 PLFKGYQPARDWIKKNK--PDVAIIVYNDHASAF 63 (277)
T ss_pred HHHHHHHHHHHHHHHhC--CCEEEEEcCchHHhh
Confidence 45556666666666654 799999999998876
No 80
>cd07950 Gallate_Doxase_N The N-terminal domain of the Class III extradiol dioxygenase, Gallate Dioxygenase, which catalyzes the oxidization and subsequent ring-opening of gallate. Gallate Dioxygenase catalyzes the oxidization and subsequent ring-opening of gallate, an intermediate in the degradation of the aromatic compound, syringate. The reaction product of gallate dioxygenase is 4-oxalomesaconate. The amino acid sequence of the N-terminal and C-terminal regions of gallate dioxygenase exhibits homology with the sequence of PCA 4,5-dioxygenase B (catalytic) and A subunits, respectively. The enzyme is estimated to be a homodimer according to the Escherichia coli enzyme. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. In this subfamily, the subunits A and B are fused to make a single polypeptide chain. The dimer interface for this subfamily may resemble the tetramer interface of classical LigAB en
Probab=30.95 E-value=47 Score=33.66 Aligned_cols=32 Identities=13% Similarity=0.134 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 313 KLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 313 ~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
.+...+.++-+.+++.+ -+|+|||++||+..+
T Consensus 32 ~~~~a~~~~~~~i~~~~--PD~iVvi~~dH~~~f 63 (277)
T cd07950 32 PIFDGYEPVKQWLAEQK--PDVLFMVYNDHVTSF 63 (277)
T ss_pred HHHHHHHHHHHHHHHhC--CCEEEEEcCcHHHHh
Confidence 45556666666666654 799999999999987
No 81
>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]
Probab=29.71 E-value=53 Score=35.56 Aligned_cols=36 Identities=31% Similarity=0.440 Sum_probs=27.8
Q ss_pred cCceEEEEEEccCCccccCCCCC--CCCCCcHHHHHHcc
Q psy12301 80 TKSTTLTLLIVYGWNDLSFHGSN--EIPTPNIDALAYNG 116 (632)
Q Consensus 80 ~pNIvlI~~D~~r~d~l~~~G~~--~~~TPnld~La~~G 116 (632)
+.-|++|++|++++.. ...|+. ...||++|+|.++-
T Consensus 3 ~k~~~LiIlDG~G~~~-~~~~NAv~~A~tP~~d~l~~~~ 40 (509)
T COG0696 3 KKPVVLIILDGWGYRE-ETEGNAVALAKTPTMDALLNNY 40 (509)
T ss_pred CCcEEEEEecCCCCCc-ccccCHHHhcCCchHHHHHHhC
Confidence 4578999999999876 444442 45899999998873
No 82
>PRK13365 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=29.29 E-value=55 Score=33.23 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 312 KKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 312 ~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
..+.+.+.++-+.+++.+ -+|+|||.|||+..+
T Consensus 31 ~~~~~a~~~i~~~v~~~~--PDviVvi~sdH~~~f 63 (279)
T PRK13365 31 KPLFDGYEPVAAWLAEQK--ADVLVFFYNDHCTTF 63 (279)
T ss_pred HHHHHHHHHHHHHHHHhC--CCEEEEEcCchHHHh
Confidence 355566666777776654 799999999999876
No 83
>cd07949 PCA_45_Doxase_B_like_1 The B subunit of unknown Class III extradiol dioxygenases with similarity to Protocatechuate 4,5-dioxygenase. This subfamily is composed of proteins of unknown function with similarity to the B subunit of Protocatechuate 4,5-dioxygenase (LigAB). LigAB belongs to the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Dioxygenases play key roles in the degradation of aromatic compounds. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=29.27 E-value=55 Score=33.18 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 313 KLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 313 ~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
.+-+.+.++-+.+++.. -+|+|||++||+..+
T Consensus 32 ~~~~a~~~~~~~v~~~~--PD~iVvis~dH~~~f 63 (276)
T cd07949 32 PFFDGFPPVHDWLEKAK--PDVAVVFYNDHGLNF 63 (276)
T ss_pred HHHHHHHHHHHHHHHcC--CCEEEEECCcHHhhh
Confidence 44555666666666654 789999999998876
No 84
>COG3885 Uncharacterized conserved protein [Function unknown]
Probab=28.19 E-value=1.3e+02 Score=29.23 Aligned_cols=34 Identities=15% Similarity=0.361 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 308 AAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 308 ~~~i~~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
...+...-..|+++++.++ .+-.+|+.+||++..
T Consensus 143 ~~~l~~Fg~~l~~~le~~~-----~ki~lIiSaD~aHth 176 (261)
T COG3885 143 REILVKFGDNLGKALEEYE-----RKISLIISADHAHTH 176 (261)
T ss_pred HHHHHHHHHHHHHHHHHhh-----cceEEEEeccccccc
Confidence 3456677788999999988 788999999999986
No 85
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=26.58 E-value=4.6e+02 Score=23.32 Aligned_cols=17 Identities=18% Similarity=0.471 Sum_probs=13.6
Q ss_pred cHHHHHHhcCCceeecc
Q psy12301 165 FLPEYLRELGYSTKAIG 181 (632)
Q Consensus 165 tl~~~Lk~~GY~T~~ig 181 (632)
-+...|+++||+....|
T Consensus 20 iv~~~l~~~GfeVi~LG 36 (134)
T TIGR01501 20 ILDHAFTNAGFNVVNLG 36 (134)
T ss_pred HHHHHHHHCCCEEEECC
Confidence 45778899999988765
No 86
>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Probab=26.42 E-value=56 Score=36.35 Aligned_cols=35 Identities=29% Similarity=0.316 Sum_probs=26.4
Q ss_pred cCceEEEEEEccCCccccCCCC--CCCCCCcHHHHHHc
Q psy12301 80 TKSTTLTLLIVYGWNDLSFHGS--NEIPTPNIDALAYN 115 (632)
Q Consensus 80 ~pNIvlI~~D~~r~d~l~~~G~--~~~~TPnld~La~~ 115 (632)
+.-||||++|+++...-. .|+ ....||++|+|.++
T Consensus 20 ~~pv~LiILDGwG~~~~~-~~NAi~~A~tP~~D~l~~~ 56 (558)
T PLN02538 20 GKPLLLIVLDGWGENAPD-EFNAIHVAPTPTMDSLKAG 56 (558)
T ss_pred CCCEEEEEecCCCCCCCC-CCCHhhhcCCCCHHHHHHh
Confidence 357999999999875433 343 24589999999886
No 87
>cd07368 PhnC_Bs_like PhnC is a Class III Extradiol ring-cleavage dioxygenase involved in the polycyclic aromatic hydrocarbon (PAH) catabolic pathway. This subfamily is composed of Burkholderia sp. PhnC and similar poteins. PhnC is one of nine protein products encoded by the phn locus. These proteins are involved in the polycyclic aromatic hydrocarbon (PAH) catabolic pathway. PhnC is a member of the class III extradiol dioxygenase family, a group os enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=23.91 E-value=96 Score=31.43 Aligned_cols=32 Identities=9% Similarity=-0.034 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 313 KLDDSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 313 ~~D~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
.+-..+.++-+.+++.+ -+|+|||+.||...+
T Consensus 30 ~~~~a~~~~~~~v~~~~--pD~ivvi~~dH~~~f 61 (277)
T cd07368 30 ICWHAYAICAERLAALQ--VTSVVVIGDDHYTLF 61 (277)
T ss_pred HHHHHHHHHHHHHHHcC--CCEEEEEcCchHhhh
Confidence 33366667777777665 799999999999886
No 88
>PRK05434 phosphoglyceromutase; Provisional
Probab=23.36 E-value=73 Score=35.28 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=25.9
Q ss_pred cCceEEEEEEccCCccccCCCC--CCCCCCcHHHHHHc
Q psy12301 80 TKSTTLTLLIVYGWNDLSFHGS--NEIPTPNIDALAYN 115 (632)
Q Consensus 80 ~pNIvlI~~D~~r~d~l~~~G~--~~~~TPnld~La~~ 115 (632)
+.-||||++|+++...-.. |+ ....||++|+|.++
T Consensus 4 ~~~~~L~IlDG~G~~~~~~-~nai~~A~tp~~d~l~~~ 40 (507)
T PRK05434 4 KKPVVLIILDGWGYREETE-GNAIALAKTPNLDRLWAN 40 (507)
T ss_pred CCcEEEEEecCCCCCCCCC-CCHHHhcCCCcHHHHHHh
Confidence 4469999999998754332 33 24689999999885
No 89
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=23.32 E-value=67 Score=35.39 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=24.8
Q ss_pred ceEEEEEEccCCccccCCCC--CCCCCCcHHHHHHc
Q psy12301 82 STTLTLLIVYGWNDLSFHGS--NEIPTPNIDALAYN 115 (632)
Q Consensus 82 NIvlI~~D~~r~d~l~~~G~--~~~~TPnld~La~~ 115 (632)
.||||++|+++...-. .|+ ....||++|+|.++
T Consensus 2 p~~L~IlDG~G~~~~~-~~nai~~A~tP~~d~l~~~ 36 (501)
T TIGR01307 2 KVVLVILDGWGYRNDD-DGNAIFAAKTPTMDELIAA 36 (501)
T ss_pred CEEEEEecCCCCCCCC-CCCHHHhcCCCcHHHHHHh
Confidence 4899999999875433 233 24689999999986
No 90
>cd07366 3MGA_Dioxygenase Subunit B of the Class III Extradiol ring-cleavage dioxygenase, 3-O-Methylgallate Dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 3-O-Methylgallate. 3-O-Methylgallate Dioxygenase catalyzes the oxidization and subsequent ring-opening of 3-O-Methylgallate (3MGA) between carbons 2 and 3. 3-O-Methylgallate Dioxygenase is a key enzyme in the syringate degradation pathway, in which the syringate is first converted to 3-O-Methylgallate by O-demethylase. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which uses a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=22.05 E-value=1e+02 Score=32.15 Aligned_cols=29 Identities=7% Similarity=0.068 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEEEccCCCCC
Q psy12301 316 DSVGTVISALQRKGMLENSIIIFMSDNGAPT 346 (632)
Q Consensus 316 ~~iG~ll~~L~~~g~~dnTlII~tSDHG~~~ 346 (632)
+.+.++-+.|++.. -+|+|||+.||...+
T Consensus 73 ~a~~~~~~~i~~~~--PDvlVIispDH~~~f 101 (328)
T cd07366 73 AALDRLADFIRAAR--IDVAVIVGDDQKELF 101 (328)
T ss_pred HHHHHHHHHHHHhC--CCEEEEEcCccHhhh
Confidence 44556666666554 799999999999876
No 91
>COG5634 Uncharacterized conserved protein [Function unknown]
Probab=22.00 E-value=60 Score=29.91 Aligned_cols=47 Identities=13% Similarity=0.146 Sum_probs=32.9
Q ss_pred CccccccccccChHHHHHHHHHHHHHHHHhCCCCCCCCCccccCCcCCCCeeec
Q psy12301 575 DPCEQNNIASSRPDISSQLYELLKYHRRTLVPQSHEQPDLVQADPKRFNDTWSP 628 (632)
Q Consensus 575 DP~E~~nla~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (632)
||.|++.|--+-+.-...|...|+.+++.+..+...+.- ++|+-|+|
T Consensus 93 dpr~MkPlPy~~~Gp~nDlNd~ie~yl~~a~~~~~t~ly-------~fg~~~gP 139 (223)
T COG5634 93 DPRRMKPLPYADEGPRNDLNDIIEEYLSIATTQPPTSLY-------YFGGNGGP 139 (223)
T ss_pred CHhHcCCCCcCCCCCcccHHHHHHHHHHHhccCCCceee-------ccCCCCCc
Confidence 689999997655566677888888888877654433332 56676766
No 92
>COG3511 PlcC Phospholipase C [Cell envelope biogenesis, outer membrane]
Probab=20.75 E-value=1.2e+03 Score=25.87 Aligned_cols=74 Identities=20% Similarity=0.118 Sum_probs=50.9
Q ss_pred CCCCCCcHHHHHHcccccceeeec--CCCCccceeeeccCC-CCCcCccCCCCCCCCCCCCCCCCCcHHHHHHhcCCc
Q psy12301 102 NEIPTPNIDALAYNGIILNNMYAQ--PVCTPSRASLMTGKY-PIHTGMQGPPIWGAEPRGVPLTERFLPEYLRELGYS 176 (632)
Q Consensus 102 ~~~~TPnld~La~~Gv~F~n~ys~--~~~~Psr~sllTG~~-p~~~g~~~~~~~~~~~~~l~~~~~tl~~~Lk~~GY~ 176 (632)
.+..||.+-.||++=+..++++++ ..|.|.|--++||.- |.-.+-... ..............++++.|..+|-.
T Consensus 154 ~rqdip~~~alAd~ftLcD~Yf~s~~GgT~pNRly~~ta~~~P~g~~gdp~-~~~p~~~~~~~~w~~~pe~L~~agvS 230 (527)
T COG3511 154 DRQDIPIHWALADAFTLCDAYFCSLLGGTFPNRLYLITACADPDGADGDPS-IVNPSISPQTYDWSTYPERLQDAGVS 230 (527)
T ss_pred ccccchHHHHhhhhheehhhhcccccCCCCcceeeeEEeeccCCCCCCCcc-ccCCccCcccccccccHhhHhhcCCC
Confidence 356899999999999999999986 668899999999987 654321111 11111111233457899999999853
No 93
>KOG4513|consensus
Probab=20.12 E-value=89 Score=32.61 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=29.9
Q ss_pred CceEEEEEEccCCccccCCCCC--CCCCCcHHHHHHcc
Q psy12301 81 KSTTLTLLIVYGWNDLSFHGSN--EIPTPNIDALAYNG 116 (632)
Q Consensus 81 pNIvlI~~D~~r~d~l~~~G~~--~~~TPnld~La~~G 116 (632)
.-|-+|++|+++-+....||+- ...||.+|+|...-
T Consensus 19 ~sv~liViDGWG~se~d~ygNai~~a~tp~Md~L~~g~ 56 (531)
T KOG4513|consen 19 KSVALIVIDGWGESEPDQYGNAIHNAPTPAMDSLKRGR 56 (531)
T ss_pred CeEEEEEEcccCCCCCccccchhhcCCChHHHHhhcCc
Confidence 4688999999999988889874 56899999997543
No 94
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=20.07 E-value=4.6e+02 Score=24.88 Aligned_cols=50 Identities=24% Similarity=0.378 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCCCCeEEeccCcCCCCCCCCCCCCCChHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q psy12301 253 KEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLE 332 (632)
Q Consensus 253 ~~a~~~i~~~~~~~Pffl~~~~~~~H~p~~~~P~~~p~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~d 332 (632)
+..++.+.+ .+|-++.++...++. . ..+.++++.|++.+..+
T Consensus 123 ~~l~~~~~~---~~~d~v~lS~~~~~~---------------------------~--------~~~~~~i~~lr~~~~~~ 164 (201)
T cd02070 123 EEFVEAVKE---HKPDILGLSALMTTT---------------------------M--------GGMKEVIEALKEAGLRD 164 (201)
T ss_pred HHHHHHHHH---cCCCEEEEecccccc---------------------------H--------HHHHHHHHHHHHCCCCc
Confidence 344455554 468888888877766 1 13688899999998666
Q ss_pred CEEEEEEc
Q psy12301 333 NSIIIFMS 340 (632)
Q Consensus 333 nTlII~tS 340 (632)
+..|++.+
T Consensus 165 ~~~i~vGG 172 (201)
T cd02070 165 KVKVMVGG 172 (201)
T ss_pred CCeEEEEC
Confidence 77777765
Done!