RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12301
(632 letters)
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation,
hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo
sapiens} SCOP: c.76.1.2
Length = 492
Score = 518 bits (1337), Expect = e-180
Identities = 173/540 (32%), Positives = 262/540 (48%), Gaps = 63/540 (11%)
Query: 92 GWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQPVCTPSRASLMTGKYPIHTGMQGPPI 151
GWND+ FHGS I TP++DALA G++L+N Y QP+ TPSR+ L+TG+Y I TG+Q I
Sbjct: 15 GWNDVGFHGS-RIRTPHLDALAAGGVLLDNYYTQPLXTPSRSQLLTGRYQIRTGLQHQII 73
Query: 152 WGAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVIS 211
W +P VPL E+ LP+ L+E GY+T +GKWHLG +R+E P RGF+++FGYL G
Sbjct: 74 WPCQPSCVPLDEKLLPQLLKEAGYTTHMVGKWHLGMYRKECLPTRRGFDTYFGYLLGSED 133
Query: 212 YYDHILSDQY-SRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFL 270
YY H + V D R A Y+T++FTK A+ LI + P +KPLFL
Sbjct: 134 YYSHERCTLIDALNVTRCALDFRDGEEVATGYKNMYSTNIFTKRAIALITNHPPEKPLFL 193
Query: 271 YLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGM 330
YLA + H L+ P+E + + +I D NR YA MV +D++VG V +AL+ G+
Sbjct: 194 YLALQSVHE-----PLQVPEEYLKPYDFIQDKNRHHYAGMVSLMDEAVGNVTAALKSSGL 248
Query: 331 LENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQN 390
N++ IF +DNG T G+N+P RG K +LWEGGV+ + SP ++Q
Sbjct: 249 WNNTVFIFSTDNGGQT---------LAGGNNWPLRGRKWSLWEGGVRGVGFVASPLLKQK 299
Query: 391 PRVSLQMMHISDWLPTLYTAAGGDTSRLPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWS 450
+ +++HISDWLPTL A G T+ +DG D W
Sbjct: 300 GVKNRELIHISDWLPTLVKLARGHTNG----------------------TKPLDGFDVWK 337
Query: 451 SLLLNTPSRRNSVLINIDEKKRTAAVRLDSWKLVLGTQENGTMDGYYGQTRSNKVPLLNF 510
++ +PS R +L NID ++ + + + +
Sbjct: 338 TISEGSPSPRIELLHNIDPNFVDSSPCPRNSMAPAKDDSSLPEYSAFNTSVH-------- 389
Query: 511 NAIVESKTYQSLQQLSQNIFLPISNIDKMRSTRQQATIHCGANPAPMTPSPCTNGPCYLF 570
A + ++ L + + P+ P +LF
Sbjct: 390 -AAIRHGNWKLLT----------GYPGCGYWFPPPSQYNVSEIPSSDPP----TKTLWLF 434
Query: 571 NLGNDPCEQNNIASSRPDISSQLYELLKYHRRTLVPQSHEQPDLVQADPKRFNDTWSPWI 630
++ DP E+++++ P I ++L L+++ + VP + DPK W PW+
Sbjct: 435 DIDRDPEERHDLSREYPHIVTKLLSRLQFYHKHSVPVYF-PAQDPRCDPK-ATGVWGPWM 492
Score = 90.6 bits (225), Expect = 3e-19
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 1 MRRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQE 60
R A Y+T++FTK A+ LI + P +KPLFLYLA + H L+ P+E
Sbjct: 155 FRDGEEVATGYKNMYSTNIFTKRAIALITNHPPEKPLFLYLALQSVHE-----PLQVPEE 209
Query: 61 TINQFQYITDPNRRTYAA 78
+ + +I D NR YA
Sbjct: 210 YLKPYDFIQDKNRHHYAG 227
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI
NEW YORK structural genomix research consortium,
NYSGXRC, transferase; 1.70A {Escherichia coli}
Length = 502
Score = 354 bits (911), Expect = e-116
Identities = 102/423 (24%), Positives = 166/423 (39%), Gaps = 49/423 (11%)
Query: 92 GWNDLSFHGSNEIPTPNIDALAYNGIILNNMYA-QPVCTPSRASLMTGKYPIHTGMQGPP 150
G+ DL+ +G + TPNID LA G+ + YA P+ +PSRA L+TG+ P TG++
Sbjct: 39 GYGDLATYGHQIVKTPNIDRLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSW- 97
Query: 151 IWGAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGF---FRREYTPLYRGFESHFGYLN 207
I + + E + L+ GY T +GK HL + GF+
Sbjct: 98 IPSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLANTA 157
Query: 208 GVISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKP 267
G ++ + + R + RN + + + + E V ++++ KP
Sbjct: 158 GFVTDATLDNAKERPRYGMVYPTGWLRNGQPTPRA-DKMSGEYVSSEVVNWLDNKKDSKP 216
Query: 268 LFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRR-------------------TYA 308
FLY+A H+ L +P++ ++ + ++ Y
Sbjct: 217 FFLYVAFTEVHS-----PLASPKKYLDMYSQYMSAYQKQHPDLFYGDWADKPWRGVGEYY 271
Query: 309 AMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVK 368
A + LD VG V+ ++ G +N+I+IF SDNG T E R+ G RG K
Sbjct: 272 ANISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDNGPVTREARKVYELNLAGETDGLRGRK 331
Query: 369 NTLWEGGVKVPAILWSP-QIQQNPRVSLQMMHISDWLPTLYTAAGGDTSRLPLNIDGLDQ 427
+ LWEGG++VPAI+ + Q VS ++ DW+PTL DG
Sbjct: 332 DNLWEGGIRVPAIIKYGKHLPQG-MVSDTPVYGLDWMPTLAKMMNFKLPT-DRTFDGESL 389
Query: 428 WSSLLLNTPSRRNSNIDGLDQWSSLLLNTPSRRNSVLINIDEKKRTAAVRLDSWKLVLGT 487
L R L+ D+ A+R WK+++
Sbjct: 390 VPVLEQKALKREK----------PLIFGIDMPFQ------DDPTDEWAIRDGDWKMIIDR 433
Query: 488 QEN 490
Sbjct: 434 NNK 436
Score = 59.7 bits (145), Expect = 2e-09
Identities = 11/62 (17%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 13 GEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPN 72
+ + + + E V ++++ KP FLY+A H+ L +P++ ++ +
Sbjct: 193 DKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTEVHS-----PLASPKKYLDMYSQYMSAY 247
Query: 73 RR 74
++
Sbjct: 248 QK 249
Score = 49.3 bits (118), Expect = 3e-06
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 564 NGPCYLFNLGNDPCEQNNIASSRPDISSQLYELLKYHRRTLVPQSHEQP 612
N P YL+NL +D E N+ +PDI Q+Y ++ + S +
Sbjct: 435 NKPKYLYNLKSDRYETLNLIGKKPDIEKQMYGKFLKYKTDIDNDSLMKA 483
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal
enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens}
SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P*
1e3c_P* 1e33_P*
Length = 489
Score = 327 bits (841), Expect = e-105
Identities = 114/442 (25%), Positives = 171/442 (38%), Gaps = 65/442 (14%)
Query: 92 GWNDLSFHGSNEIPTPNIDALAYNGIILNNMYA-QPVCTPSRASLMTGKYPIHTGMQGPP 150
G+ DL +G TPN+D LA G+ + Y + TPSRA+L+TG+ P+ GM
Sbjct: 14 GYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLXTPSRAALLTGRLPVRMGMYPGV 73
Query: 151 IWGAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGF-FRREYTPLYRGFESHFGYLNG- 208
+ + G+PL E + E L GY T GKWHLG + P ++GF G
Sbjct: 74 LVPSSRGGLPLEEVTVAEVLAARGYLTGMAGKWHLGVGPEGAFLPPHQGFHRFLGIPYSH 133
Query: 209 -------VISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIED 261
+ + D + + A + A L+ D
Sbjct: 134 DQGPCQNLTCFPPATPCDGGCDQGLVPIPLLANLSVEAQPPWLPGLEARYMAFAHDLMAD 193
Query: 262 QPV-DKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGT 320
D+P FLY A H + Q + R + + +LD +VGT
Sbjct: 194 AQRQDRPFFLYYASHHTHY-----PQFSGQSFAERSG------RGPFGDSLMELDAAVGT 242
Query: 321 VISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPA 380
+++A+ G+LE +++IF +DNG ET G + R K T +EGGV+ PA
Sbjct: 243 LMTAIGDLGLLEETLVIFTADNGP------ETMRMSRGGCSGLLRCGKGTTYEGGVREPA 296
Query: 381 ILWSP-QIQQNPRVSLQMMHISDWLPTLYTAAGGDTSRLPLNIDGLDQWSSLLLNTPSRR 439
+ + P I P V+ ++ D LPTL AG
Sbjct: 297 LAFWPGHIA--PGVTHELASSLDLLPTLAALAGAPLP----------------------- 331
Query: 440 NSNIDGLDQWSSLLLNTPSRRNSVL---INIDEKKRTAAVRLDSWKLVLGTQENGTMDGY 496
N +DG D LL S R S+ DE + AVR +K TQ + D
Sbjct: 332 NVTLDGFDLSPLLLGTGKSPRQSLFFYPSYPDEVRGVFAVRTGKYKAHFFTQGSAHSDTT 391
Query: 497 YGQ-------TRSNKVPLLNFN 511
+++ PLL ++
Sbjct: 392 ADPACHASSSLTAHEPPLL-YD 412
Score = 44.2 bits (105), Expect = 9e-05
Identities = 12/66 (18%), Positives = 18/66 (27%), Gaps = 12/66 (18%)
Query: 14 EYATDLFTKEAVQLIEDQPV-DKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPN 72
+ A L+ D D+P FLY A H + Q +
Sbjct: 177 PGLEARYMAFAHDLMADAQRQDRPFFLYYASHHTHY-----PQFSGQSFAERSG------ 225
Query: 73 RRTYAA 78
R +
Sbjct: 226 RGPFGD 231
Score = 40.8 bits (96), Expect = 0.001
Identities = 13/72 (18%), Positives = 23/72 (31%), Gaps = 18/72 (25%)
Query: 566 PCYLFNLGNDPCEQNNI----ASSRPDISSQLYELLKY---HRRTLVPQSHEQPDLVQAD 618
P L++L DP E N+ A + P++ L +L +
Sbjct: 407 PPLLYDLSKDPGENYNLLGGVAGATPEVLQALKQLQLLKAQLDAAVTF-----------G 455
Query: 619 PKRFNDTWSPWI 630
P + P +
Sbjct: 456 PSQVARGEDPAL 467
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG,
structural genomics, PSI-2, protein structure
initiative; 1.70A {Bacteroides fragilis}
Length = 491
Score = 272 bits (697), Expect = 2e-84
Identities = 88/428 (20%), Positives = 160/428 (37%), Gaps = 75/428 (17%)
Query: 92 GWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPP 150
+ + G + TP++D LA GI N + PV +P+R LMTG YPI + + G
Sbjct: 39 RGDAIGCIGKEPVKTPHLDKLASEGINFTNAISSYPVSSPARGMLMTGMYPIGSKVTGNC 98
Query: 151 IWGAEPRGVPL--TERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLY--RGFESHFGYL 206
P GV L R + L++ GY+ IGKWHL + Y Y RG + +
Sbjct: 99 NSETAPYGVELSQNARCWSDVLKDQGYNMGYIGKWHLDAPYKPYVDTYNNRGKVAWNEWC 158
Query: 207 NGVISY-YDHILS----DQYSRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIED 261
+ +DH ++ D + + + N R + + V ++ + +A++ I
Sbjct: 159 PPERRHGFDHWIAYGTYDYHLKPMYWNTTAPRDS----FYYVNQWGPEYEASKAIEYING 214
Query: 262 Q-PVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDP------------------ 302
Q +P L ++ H G P ++ +
Sbjct: 215 QKDQKQPFALVVSMNPPHTGYEL----VPDRYKEIYKDLDVEALCKGRPDIPAKGTEMGD 270
Query: 303 ----NRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNW 358
N R Y A + +D++VG +I AL++ + +N+I++F SD+G
Sbjct: 271 YFRNNIRNYYACITGVDENVGRIIEALKQNNLFDNTIVVFTSDHGICM------------ 318
Query: 359 GSNYPYRGVKNTLWEGGVKVPAILWSP-QIQQNPRVSLQMMHISDWLPTLYTAAGGDTSR 417
K+ +E +++P IL P QI+ + M+ +D PTL + G
Sbjct: 319 --GAHENAGKDIFYEESMRIPMILSWPDQIKPR-KSDPLMIAFADLYPTLLSMMGFSKE- 374
Query: 418 LPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLLNTPSRRNSVLINIDEKKRTAAVR 477
+P + D + +L + + + + +R
Sbjct: 375 IPETVQTFDLSNEVLTGKNKKD-----------------LVQPYYFVKFDNHATGYRGLR 417
Query: 478 LDSWKLVL 485
D + +
Sbjct: 418 TDRYTYAV 425
Score = 46.5 bits (111), Expect = 2e-05
Identities = 7/41 (17%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 9 WDTVGEYATDLFTKEAVQLIEDQ-PVDKPLFLYLAHLAAHA 48
+ V ++ + +A++ I Q +P L ++ H
Sbjct: 193 FYYVNQWGPEYEASKAIEYINGQKDQKQPFALVVSMNPPHT 233
Score = 43.1 bits (102), Expect = 2e-04
Identities = 14/59 (23%), Positives = 19/59 (32%)
Query: 564 NGPCYLFNLGNDPCEQNNIASSRPDISSQLYELLKYHRRTLVPQSHEQPDLVQADPKRF 622
LF+ NDP E NNIAS + ++ LK + L
Sbjct: 432 IDNVILFDRTNDPHEMNNIASQQLKLTHTFNRQLKTWLEKTNDPFAQYIKLKLEHHHHH 490
>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A {Pseudomonas
aeruginosa} SCOP: c.76.1.2
Length = 536
Score = 257 bits (657), Expect = 4e-78
Identities = 117/486 (24%), Positives = 183/486 (37%), Gaps = 105/486 (21%)
Query: 87 LLIVY---GWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQPVCTPSRASLMTGKYPIH 143
L+IV G++D+ G EI TPN+DALA G+ L + + +P+R+ L+TG
Sbjct: 8 LVIVADDLGFSDIGAFGG-EIATPNLDALAIAGLRLTDFHTASTXSPTRSMLLTGTDHHI 66
Query: 144 TGM-QGPPIWGAEPRGVP-----LTER--FLPEYLRELGYSTKAIGKWHLGFFRREYTPL 195
G+ E G P L ER LPE LRE GY T GKWHLG + E TP
Sbjct: 67 AGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLG-LKPEQTPH 125
Query: 196 YRGFESHFGYLNGVISYY--DHILSDQYSRTVELNGHDMRRN-LSTAWDTVGEYATDLFT 252
RGFE F L G ++Y + + R ++ + G Y++D F
Sbjct: 126 ARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFG 185
Query: 253 KEAVQLIEDQPVDKPLFLYLAHLAAHAGN----------AGKHLEAPQ------------ 290
+ +Q ++++ +P F YL A H G++ P+
Sbjct: 186 DKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKE 245
Query: 291 --------------ETINQFQYITDPNRR-------TYAAMVKKLDDSVGTVISALQRKG 329
+++ + D R YAAMV+++D ++G V+ L+R+G
Sbjct: 246 LGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQG 305
Query: 330 MLENSIIIFMSDNGAPTVEYRETSNYRN-------------------------------W 358
L+N+ ++FMSDNGA +
Sbjct: 306 ELDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQ 365
Query: 359 GSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHISDWLPTLYTAAGGDTSRL 418
+ P R K +GG++VPA++ P++ + +S + D PTL AG
Sbjct: 366 AATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHP-- 423
Query: 419 PLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLLNTPSRRNSVLINIDEKKRTAAVRL 478
G + G L T + + + E A+R
Sbjct: 424 GKRWRGREIAE-------------PRGRSWLGWLSGETEAAHDENTVTGWELFGMRAIRQ 470
Query: 479 DSWKLV 484
WK V
Sbjct: 471 GDWKAV 476
Score = 46.0 bits (109), Expect = 3e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 13 GEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQF 65
G Y++D F + +Q ++++ +P F YL A H L+AP+E + ++
Sbjct: 177 GFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHW-----PLQAPREIVEKY 224
Score = 39.8 bits (93), Expect = 0.003
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 555 APMTPSPCTNGPCYLFNLGNDPCEQNNIASSRPDISSQLYELL-KYHRRTLV 605
A P+P L++L DP E +++A S+P ++L E +Y T V
Sbjct: 475 AVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHWKRYVSETGV 526
>1p49_A Steryl-sulfatase; steroid biosynthesis, steroid sulfatase, estrone
sulfate, dehydroepiandrosterone sulfate, human placental
enzyme; HET: ALS BOG NAG; 2.60A {Homo sapiens} SCOP:
c.76.1.2
Length = 562
Score = 241 bits (615), Expect = 8e-72
Identities = 122/604 (20%), Positives = 199/604 (32%), Gaps = 147/604 (24%)
Query: 92 GWNDLSFHGSNEIPTPNIDALAYNGIILNNMYA-QPVCTPSRASLMTGKYPIHTGMQ--- 147
G D +G+ I TPNID LA G+ L A P+ TPSRA+ MTG+YP+ +GM
Sbjct: 17 GIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLXTPSRAAFMTGRYPVRSGMASWS 76
Query: 148 --GPPIWGAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGF-----FRREYTPLYRGFE 200
G ++ A G+P E + L++ GYST IGKWHLG + PL+ GF
Sbjct: 77 RTGVFLFTASSGGLPTDEITFAKLLKDQGYSTALIGKWHLGMSCHSKTDFCHHPLHHGFN 136
Query: 201 SHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVGE--------------- 245
+G + ++ + + + T+
Sbjct: 137 YFYGISLTNLRDCKPGEGSVFTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFF 196
Query: 246 ---YATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHAGNAGKHL-----EAPQETINQ-- 295
+ L + + F+ + + +L + I +
Sbjct: 197 SLLFLAALILTLFLGFLHYFR-PLNCFMMRNYEIIQQPMSYDNLTQRLTVEAAQFIQRNT 255
Query: 296 ----FQYITDP----------------NRRTYAAMVKKLDDSVGTVISALQRKGMLENSI 335
++ Y V+++D SVG +++ L + +++
Sbjct: 256 ETPFLLVLSYLHVHTALFSSKDFAGKSQHGVYGDAVEEMDWSVGQILNLLDELRLANDTL 315
Query: 336 IIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSL 395
I F SD G VE + + GSN Y+G K WEGG++VP IL P++ Q +
Sbjct: 316 IYFTSDQG-AHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRVIQAGQKID 374
Query: 396 QMMHISDWLPTLYTAAGGDTSRLPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLLN 455
+ D PT+ AG LP + IDG D L
Sbjct: 375 EPTSNMDIFPTVAKLAGAP---LP-------------------EDRIIDGRDLMPLLEGK 412
Query: 456 TPSRRNSVLINIDEKKRTA-----AVRLDSWKLVLGTQENGTMDGYYGQTRSNKVPLLNF 510
+ + L + A WK T
Sbjct: 413 SQRSDHEFLFHYCNAYLNAVRWHPQNSTSIWKAFFFTP---------------------- 450
Query: 511 NAIVESKTYQSLQQLSQNIFLPISNIDKMRSTRQQATIHCGANPAPMTPSPCTNGPCYLF 570
N + + S AT C + +T + P LF
Sbjct: 451 ------------------------NFNPVGSNGCFATHVCFCFGSYVT----HHDPPLLF 482
Query: 571 NLGNDPCEQNNIASSRPDISSQLYELLKY----HRRTLVPQSHEQPDLVQADPKRFNDTW 626
++ DP E+N + + ++ ++++ H +TL V N W
Sbjct: 483 DISKDPRERNPLTPASEPRFYEILKVMQEAADRHTQTLPE--------VPDQFSWNNFLW 534
Query: 627 SPWI 630
PW+
Sbjct: 535 KPWL 538
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint
center for structural genomics, JCSG; HET: EPE; 2.40A
{Bacteroides thetaiotaomicron vpi-5482}
Length = 482
Score = 193 bits (493), Expect = 4e-55
Identities = 71/438 (16%), Positives = 121/438 (27%), Gaps = 112/438 (25%)
Query: 92 GWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPP 150
+ +G + T ID +A G+I +N Y P+ PSRA+L +G P T ++
Sbjct: 28 TQRVVGAYGQTQGCTLPIDEVASRGVIFSNAYVGCPLSQPSRAALWSGMMPHQTNVRS-- 85
Query: 151 IWGAEPRGVPL--TERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNG 208
+EP L L E GY GK H G F +
Sbjct: 86 -NSSEPVNTRLPENVPTLGSLFSESGYEAVHFGKTHDM-----------GSLRGFKHKEP 133
Query: 209 VISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPL 268
V + + ++AV + + P +P
Sbjct: 134 VAKPFTDP---------------------EFPVNNDSFLDVGTCEDAVAYLSNPP-KEPF 171
Query: 269 FLYLAHLAAH------------------------------------AGNAGKHLEAPQET 292
H +++
Sbjct: 172 ICIADFQNPHNICGFIGENAGVHTDRPISGPLPELPDNFDVEDWSNIPTPVQYICCSHRR 231
Query: 293 INQFQYITDPN----RRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVE 348
+ Q + + N + K + V +V+ AL N+I++ M+D+G
Sbjct: 232 MTQAAHWNEENYRHYIAAFQHYTKMVSKQVDSVLKALYSTPAGRNTIVVIMADHGD---- 287
Query: 349 YRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHIS--DWLPT 406
S + + ++ VP I P I+Q + ++ D LPT
Sbjct: 288 --------GMAS-HRMVTKHISFYDEMTNVPFIFAGPGIKQQKKPVDHLLTQPTLDLLPT 338
Query: 407 LYTAAGGDTSRLPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLLNTPSRRNSVLIN 466
L AG P G+ +L + + + + TP R
Sbjct: 339 LCDLAGIAV---PAEKAGISLAPTLRGEKQKKSHPYVVSEWHSEYEYVTTPGR------- 388
Query: 467 IDEKKRTAAVRLDSWKLV 484
VR +K
Sbjct: 389 --------MVRGPRYKYT 398
Score = 34.6 bits (80), Expect = 0.094
Identities = 5/35 (14%), Positives = 11/35 (31%), Gaps = 1/35 (2%)
Query: 13 GEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAH 47
+ ++AV + + P +P H
Sbjct: 148 DSFLDVGTCEDAVAYLSNPP-KEPFICIADFQNPH 181
Score = 34.6 bits (80), Expect = 0.10
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 562 CTNGPCYLFNLGNDPCEQNNIASSR--PDISSQLYELLKYHRRTLVPQSHEQPDLVQADP 619
L+++ DP E+ N+A I ++ LL + +S + ++ D
Sbjct: 401 LEGNGEELYDMKKDPGERKNLAKDPKYSKILAEHRALLDDYIT----RSKDDYRSLKVDA 456
Query: 620 KRFNDTWSPW 629
+P
Sbjct: 457 DPRCRNHTPG 466
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase,
plasmid, formylglycine, phosphodiesterase; 1.42A
{Rhizobium leguminosarum BV} PDB: 2w8s_A
Length = 543
Score = 167 bits (426), Expect = 3e-45
Identities = 80/453 (17%), Positives = 140/453 (30%), Gaps = 91/453 (20%)
Query: 96 LSFHGSNE-IPTPNIDALAYNGIILNNMYAQ-PVCTPSRASLMTGKYPIHTGMQGPPIWG 153
L G + + TPN+D L G+ N P+RASL+TG Y ++ +
Sbjct: 52 LRADGKIDFLKTPNLDRLCREGVTFRNHVTTCVPXGPARASLLTGLYLMNHRA----VQN 107
Query: 154 AEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGV---- 209
P + L + LR +GY IG R +P F ++G
Sbjct: 108 TVP--LDQRHLNLGKALRGVGYDPALIGYTTTVPDPRTTSPNDPRFRVLGDLMDGFHPVG 165
Query: 210 -----ISYYDHILSDQYSRTVELN---GHDMRRNLSTAWDTVG------EYATDLFTKEA 255
+ Y ++ E + + FT+ A
Sbjct: 166 AFEPNMEGYFGWVAQNGFDLPEHRPDIWLPEGEDAVAGATDRPSRIPKEFSDSTFFTERA 225
Query: 256 VQLIEDQPVDKPLFLYLAHLAAH---------------------AGNAGKHLEAPQETIN 294
+ ++ + KP FL+L + H A +EA Q +
Sbjct: 226 LTYLKGRD-GKPFFLHLGYYRPHPPFVASAPYHAMYRPEDMPAPIRAANPDIEAAQHPLM 284
Query: 295 QFQYITDPN----------------------RRTYAAMVKKLDDSVGTVISALQRKGMLE 332
+F + R TY ++ ++DD +G V S L G +
Sbjct: 285 KFYVDSIRRGSFFQGAEGSGATLDEAELRQMRATYCGLITEVDDCLGRVFSYLDETGQWD 344
Query: 333 NSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNP- 391
+++IIF SD+G E G ++ K + ++P ++
Sbjct: 345 DTLIIFTSDHG----EQ--------LGDHHLLG--KIGYNDPSFRIPLVIKDAGENARAG 390
Query: 392 RVSLQMMHISDWLPTLYTAAGGDTSRLPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSS 451
+ D +PT+ GG P DGL L P + + +
Sbjct: 391 AIESGFTESIDVMPTILDWLGGKI---PHACDGLSLLPFLSEGRPQDWRTELHYEYDFRD 447
Query: 452 LLLNTPSRRNSVLINIDEKKRTAAVRLDSWKLV 484
+ + P L ++ + +K V
Sbjct: 448 VYYSEPQSF---LGLGMNDCSLCVIQDERYKYV 477
Score = 31.2 bits (71), Expect = 1.0
Identities = 9/43 (20%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Query: 562 CTNGPCYLFNLGNDPCEQNNIASSR--PDISSQLYELLKYHRR 602
P F+L +DP E N+A + + R
Sbjct: 479 FAALPPLFFDLRHDPNEFTNLADDPAYAALVRDYAQKALSWRL 521
Score = 30.1 bits (68), Expect = 2.9
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 14 EYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAH 47
+ FT+ A+ ++ + KP FL+L + H
Sbjct: 215 FSDSTFFTERALTYLKGRD-GKPFFLHLGYYRPH 247
>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB,
sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio
parahaemolyticus}
Length = 450
Score = 73.3 bits (180), Expect = 7e-14
Identities = 63/328 (19%), Positives = 103/328 (31%), Gaps = 68/328 (20%)
Query: 92 GWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQPVCTPSRASLMTGKYPIHTGMQGPPI 151
G + G + TPN+D L G MYA T S + + TG P
Sbjct: 97 GAQFVGSLGGLPL-TPNLDELMQEGWQFTQMYAT--GTRSVRGIEA----VTTGFPPSPS 149
Query: 152 WGAEPRGVPLTERF-LPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVI 210
T F + + L+E GY T+ I F + F G+
Sbjct: 150 RAVVKLSKSQTGFFTIADLLKEQGYHTQFIYGGEANFDNM------KTFFFGNGF----- 198
Query: 211 SYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFL 270
D I+ ++ G +W G DL+ K + DKP F
Sbjct: 199 ---DQIVEEKNYTNPGFVG---------SW---GVSDEDLYNKADEEFERLSKGDKPFFS 243
Query: 271 YLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGM 330
+ + H+ P E D T VK D ++GT ++
Sbjct: 244 LVFTSSNHS---------PYEYPEGKIEQYDSEHMTRNNAVKYSDYALGTFFDKAKKSSY 294
Query: 331 LENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQI--Q 388
+++I I ++D+ A +PA++ I +
Sbjct: 295 WDDTIFIVIADHDARVFGANLVPVKHF-------------------HIPALIIGKDIQPR 335
Query: 389 QNPRVSLQMMHISDWLPTLYTAAGGDTS 416
++ R++ + D PTL + G D
Sbjct: 336 KDDRIANNI----DMPPTLLSLIGVDAK 359
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 72.8 bits (178), Expect = 2e-13
Identities = 84/556 (15%), Positives = 151/556 (27%), Gaps = 196/556 (35%)
Query: 15 YATDL---FTKEAVQLIE-----DQPVDKP-LFL-YLAHLA--AHAGNAGKHLEAPQETI 62
A+ L F K + E D+P L +L +++ G+ + +
Sbjct: 29 IASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCL 88
Query: 63 NQFQYITDPNRRTYAALTKSTTLTLLIVYGWNDL-----SFHGSNEIPTPNIDALA---Y 114
+F+ Y L ND+ N+ L
Sbjct: 89 TEFE-------NCY--LEG------------NDIHALAAKLLQENDTTLVKTKELIKNYI 127
Query: 115 NGIILNNMYAQPVCTPSRASLM----TGKYPIHT--GMQGPPIWGAEPRGVPLTERFLPE 168
I+ +P S ++L G + G QG T+ + E
Sbjct: 128 TARIMAK---RPFDKKSNSALFRAVGEGNAQLVAIFGGQGN------------TDDYFEE 172
Query: 169 YLRELGYSTKAIGKWHLGFFRREYTPLYRGF-ESHFGYLNGVISYYDHILSDQYSRTVEL 227
LR+L Y T Y L + L+ +I +++
Sbjct: 173 -LRDL-YQT--------------YHVLVGDLIKFSAETLSELIRTTLDA-EKVFTQ---- 211
Query: 228 NGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPL-FLY-LAHLAAHAGNAGKH 285
G ++ L +T + + P+ PL + LAH A G
Sbjct: 212 -GLNILEWLENPSNTPDKD----YLLSI-------PISCPLIGVIQLAHYVVTAKLLGFT 259
Query: 286 LEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAP 345
P E + + T +++A+ I +D+
Sbjct: 260 ---PGELRSYLKGATG---------------HSQGLVTAV----------AIAETDSWE- 290
Query: 346 TVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNPRVSLQMMHISDWLP 405
+ + + + + G + P SL + D
Sbjct: 291 --SFFVSV----------RKAITVLFFIG--------VRCY-EAYPNTSLPPSILED--- 326
Query: 406 TLYTAAGGDTSRLP-LNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLLNTPSRRNSVL 464
+ + P L+I L Q + + ++ NS++ Q L+N +N V
Sbjct: 327 ---SLENNEGVPSPMLSISNLTQ--EQVQDYVNKTNSHLPAGKQVEISLVNGA--KNLV- 378
Query: 465 INIDEKKRTAAVRLDSWKLVLGTQENGTMDGYYGQTRSNKVPLLNFNAIVESKTYQSLQQ 524
V G + ++ G R K P S QS
Sbjct: 379 -------------------VSGPPQ--SLYGLNLTLRKAKAP---------SGLDQSRIP 408
Query: 525 LSQ------NIFLPIS 534
S+ N FLP++
Sbjct: 409 FSERKLKFSNRFLPVA 424
Score = 55.8 bits (134), Expect = 4e-08
Identities = 74/475 (15%), Positives = 137/475 (28%), Gaps = 161/475 (33%)
Query: 227 LNGHDMRR------NLSTAWD---TVGEYATDL---FTKEAVQLIE-----DQPVDKP-L 268
++ + R +L A+ L F K + E D+P L
Sbjct: 1 MDAYSTRPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAEL 60
Query: 269 FL-YLAHLA--AHAGNAGKHLEAPQETINQF--QYITDPNRRTYAAMVKKLDDSVGTVIS 323
+L +++ G+ + + +F Y+ + AA KL T +
Sbjct: 61 VGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAA---KLLQENDTTL- 116
Query: 324 ALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPY-RGVKNTLWE----GGVKV 378
++ K +++N Y + P+ + + L+ G ++
Sbjct: 117 -VKTKELIKN---------------YITARIM----AKRPFDKKSNSALFRAVGEGNAQL 156
Query: 379 PAILWSPQIQQNPRVSLQMMHISDWLP---TLYTAAGGDTSRLPLNIDGLDQWSSLLLNT 435
AI Q N D+ LY T L + L ++S+ L+
Sbjct: 157 VAIFGG---QGN---------TDDYFEELRDLY-----QTYH-VL-VGDLIKFSAETLSE 197
Query: 436 PSRRNSNID-----GLD--QWSSLLLNTPSRR--NSVLINIDEKKRTAAVRLDSWKLVLG 486
R + + GL+ +W L PS L+ + + S L+
Sbjct: 198 LIRTTLDAEKVFTQGLNILEW----LENPSNTPDKDYLL-------SIPI---SCPLIGV 243
Query: 487 TQENGTMDGYY------GQTRSNKVPLLN-----FNAIV------ESKTYQSLQQL---- 525
Q + Y G T L +V E+ +++S
Sbjct: 244 IQ----LAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKA 299
Query: 526 ----------SQNIFLPISNIDKMRSTRQQATIHCGANPAPM-----TPSPC-------T 563
+ P +++ S + + + P+PM T
Sbjct: 300 ITVLFFIGVRCYEAY-PNTSLPP--SILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKT 356
Query: 564 NGPCYLFN-------LGNDPCEQNNIASSRPDISSQLYELLKYHRRTLVPQSHEQ 611
N +L L N +N + S P LY L R+ P +Q
Sbjct: 357 NS--HLPAGKQVEISLVNGA--KNLVVSGPP---QSLYGLNLTLRKAKAPSGLDQ 404
Score = 50.0 bits (119), Expect = 2e-06
Identities = 51/299 (17%), Positives = 84/299 (28%), Gaps = 109/299 (36%)
Query: 32 PVDKPL-FLY-LAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAL--TKSTT--- 84
P+ PL + LAH A G P E + + T ++ A+ ++ +
Sbjct: 235 PISCPLIGVIQLAHYVVTAKLLGFT---PGELRSYLKGATGHSQGLVTAVAIAETDSWES 291
Query: 85 --------LTLLIVYGW---------------NDLSFHGSNEIPTP-------------- 107
+T+L G + S + +P+P
Sbjct: 292 FFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQD 351
Query: 108 NIDALAYNG---------IILNNMYAQPVCTPSRASLMTGKYPIHTGMQGPPIWGAEPRG 158
++ N I L N V + SL + + P G +
Sbjct: 352 YVNKT--NSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLR-KAKAPS--GLDQSR 406
Query: 159 VPLTER-------FLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVIS 211
+P +ER FLP + +P F SH L
Sbjct: 407 IPFSERKLKFSNRFLP------------VA-----------SP----FHSH--LLVPAS- 436
Query: 212 YYDHILSDQYSRTVELNGHDMRRNLSTAWDTV-G----EYATDLFTKEAVQLIEDQPVD 265
D I D V N D++ +DT G + + ++ V I PV
Sbjct: 437 --DLINKDLVKNNVSFNAKDIQ---IPVYDTFDGSDLRVLSGSI-SERIVDCIIRLPVK 489
Score = 34.6 bits (79), Expect = 0.13
Identities = 55/362 (15%), Positives = 102/362 (28%), Gaps = 154/362 (42%)
Query: 8 AWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAH-AGNAGKHLEAPQETINQFQ 66
W+ + D + + ++ + PV +L H G GK + + F+
Sbjct: 1645 VWNRADNHFKDTYGFSILDIVINNPV---------NLTIHFGGEKGKRIRENYSAM-IFE 1694
Query: 67 YITDPNRRT---YAALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNN-M 122
I D +T + + + +T +F +L+
Sbjct: 1695 TIVDGKLKTEKIFKEINEHST----------SYTFRSEKG--------------LLSATQ 1730
Query: 123 YAQP-VCTPSRASLMTGKYPIHTGMQGPPIWGAEPRGVPLTERFLPEYLRELGY----ST 177
+ QP + +A + E L+ G +T
Sbjct: 1731 FTQPALTLMEKA-----------------AF---------------EDLKSKGLIPADAT 1758
Query: 178 KAIGKWH-LGFFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNG----HDM 232
A G H LG EY L + V+S + V G +
Sbjct: 1759 FA-G--HSLG----EYAAL-----ASLA---DVMSIESLV------EVVFYRGMTMQVAV 1797
Query: 233 RRNLSTAWDTVGEYATD------LFTKEAVQLIEDQPVDKPLFLYLAHLAAHAG------ 280
R+ G A + F++EA+Q + ++ + G
Sbjct: 1798 PRD-ELGRSNYGMIAINPGRVAASFSQEALQYVVER------------VGKRTGWLVEIV 1844
Query: 281 N----------AGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGM 330
N AG L A ++ + + + ++K+D I LQ+
Sbjct: 1845 NYNVENQQYVAAG-DLRA----LDTVTNVLNFIK------LQKID------IIELQKSLS 1887
Query: 331 LE 332
LE
Sbjct: 1888 LE 1889
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase,
phosphatase, cell membrane, transmembrane, LTA,
membrane, secreted, cell WALL; HET: TPO PG4; 2.35A
{Bacillus subtilis}
Length = 436
Score = 69.9 bits (171), Expect = 6e-13
Identities = 46/325 (14%), Positives = 95/325 (29%), Gaps = 49/325 (15%)
Query: 96 LSFHGSNEIPTPNIDALAYN--GIILNNMYAQPVCTPSRASLMTGKYPIHTGMQGPPIWG 153
+ + + TP ++ LA++ +N + Q + + + + P G
Sbjct: 47 IDYKIDGKEVTPFLNKLAHDNETFYFDNFFHQTGQGKTSDAEFM----MENSLY-PLAQG 101
Query: 154 AEPRGVPLTERF-LPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISY 212
+ +P L+ Y++ F+ R G
Sbjct: 102 SVFVNKAQNTLQSVPAILKSKNYTSATFHGNTQTFWNR------NEMYKAEGI------- 148
Query: 213 YDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYL 272
D Y +DM + + G F KE++ L+E +P +
Sbjct: 149 -DKFFDSAY--------YDMNEENTKNY---GMKDKPFF-KESMPLLESL--PQPFYTKF 193
Query: 273 AHLAAHAGNAGKHLEAPQETIN-QFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGML 331
L+ H + + D Y LD S+ + L++ G+
Sbjct: 194 ITLSNHFPF-----GMDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLY 248
Query: 332 ENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQQNP 391
+ SII+ D+ + + + + +VP + + ++
Sbjct: 249 DKSIIVMYGDHYGISENHNKAMAKVLGKDEIT-----DYDNAQLQRVPLFIHAAGVK--G 301
Query: 392 RVSLQMMHISDWLPTLYTAAGGDTS 416
+ D PT+ G DT
Sbjct: 302 EKVHKYAGDVDVAPTILHLLGVDTK 326
>2w5q_A Processed glycerol phosphate lipoteichoic acid synthase;
transmembrane, cell WALL biogenesis/degradation, LTAS,
membrane, secreted; 1.20A {Staphylococcus aureus} PDB:
2w5s_A* 2w5t_A* 2w5r_A*
Length = 424
Score = 61.4 bits (149), Expect = 3e-10
Identities = 53/328 (16%), Positives = 101/328 (30%), Gaps = 54/328 (16%)
Query: 96 LSFHGSNEIPTPNIDALA---YNGIILNNMYAQPVCTPSRASLMTGKYPIHTGMQGPPIW 152
++ + + TP ++ L+ N + Q + S T + + G P
Sbjct: 45 INKKVNGKEVTPFLNKLSSGKEQFTYFPNFFHQTGQGKTSDSEFT----MDNSLYGLPQG 100
Query: 153 GAEPRGVPLTERFLPEYLRE-LGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVIS 211
A T + LP L + GY + + H G F + V
Sbjct: 101 SAFSLKGDNTYQSLPAILDQKQGYKSDVM---H-------------GDYKTFWNRDQVYK 144
Query: 212 Y--YDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLF 269
+ D Y +DM G F K++ P +
Sbjct: 145 HFGIDKFYDATY--------YDMSDKNVVNL---GLKDKIFF-KDSANYQAKM--KSPFY 190
Query: 270 LYLAHLAAHAGNAGKHLEAPQETINQFQYIT-DPNRRTYAAMVKKLDDSVGTVISALQRK 328
+L L H ++ + T D Y + LD+++ I+ L++K
Sbjct: 191 SHLITLTNHYP-----FTLDEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKK 245
Query: 329 GMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGVKNTLWEGGVKVPAILWSPQIQ 388
G+ +NS+I+ D+ + + P + + + + P
Sbjct: 246 GLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAK------FTDLNRTGFWIKIPGKS 299
Query: 389 QNPRVSLQMMHISDWLPTLYTAAGGDTS 416
++ + D +PT+ AG DT
Sbjct: 300 --GGINNEYAGQVDVMPTILHLAGIDTK 325
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 50.6 bits (120), Expect = 1e-06
Identities = 56/446 (12%), Positives = 126/446 (28%), Gaps = 120/446 (26%)
Query: 202 HFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQ--LI 259
H +++ + + QY + + N V + + +KE + ++
Sbjct: 3 HHHHMDFETGEHQY----QYKDILSVFEDAFVDNFDC--KDVQDMPKSILSKEEIDHIIM 56
Query: 260 EDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVG 319
V L L+ L +E + +F + + L +
Sbjct: 57 SKDAVSGTLRLF-----------WTLLSKQEEMVQKF-------------VEEVLRINYK 92
Query: 320 TVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRN--WGSNYPYRGVKNTLWEGGVK 377
++S ++ ++ P++ R R+ + N +
Sbjct: 93 FLMSPIK-------------TEQRQPSMMTRMYIEQRDRLYNDNQVFA------------ 127
Query: 378 VPAILWSPQIQQNPRVSLQMMHISDWLPTLYTAAG-GDTS-------------RLPLNI- 422
+ Q R +L + + + + G G T ++ I
Sbjct: 128 -KYNVSRLQPYLKLRQALLELRPAKNV-LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF 185
Query: 423 -----------DGLDQWSSLLL----------NTPSRRNSNIDGLDQWSSLLLNTPSRRN 461
L+ LL + S I + LL + N
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN 245
Query: 462 SVLI--NIDEKKRTAAVRLDSWKLVLGTQENGTMDGYYGQTRSNKVPLLNFNAIVESKTY 519
+L+ N+ K A L K++L T+ D T L+ +++ +
Sbjct: 246 CLLVLLNVQNAKAWNAFNLSC-KILLTTRFKQVTDFLSAATT--THISLDHHSMTLTPD- 301
Query: 520 QSLQQLSQNIFLPISNIDKMRSTRQQATIHCGANP--APMTPSPCTNGPCYLFNLGNDPC 577
+ L + + ++ ++ NP + +G N + C
Sbjct: 302 EVKSLLLKYLDCRPQDL------PREV---LTTNPRRLSIIAESIRDGLATWDNWKHVNC 352
Query: 578 EQ--NNIASS----RPDISSQLYELL 597
++ I SS P ++++ L
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRL 378
Score = 48.3 bits (114), Expect = 6e-06
Identities = 76/693 (10%), Positives = 167/693 (24%), Gaps = 249/693 (35%)
Query: 12 VGEYATDLFTKEAVQ--LIEDQPVDKPLFLYLAHLAAHAGNAGKHLEAPQETINQF-QYI 68
V + + +KE + ++ V L L+ L +E + +F + +
Sbjct: 38 VQDMPKSILSKEEIDHIIMSKDAVSGTLRLF-----------WTLLSKQEEMVQKFVEEV 86
Query: 69 TDPNRRTYAALTKSTTLTLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMY-AQPV 127
N Y + P+ + +Y V
Sbjct: 87 LRIN------------------YKFLMSPIKTEQRQPSMMTRMYIEQ---RDRLYNDNQV 125
Query: 128 CTP---SRASLMT-----------GKY-PIHTGMQG-------------PPIWGAEPRGV 159
SR K I G+ G + +
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLID-GVLGSGKTWVALDVCLSYKVQCKMDFKI 184
Query: 160 -------PLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISY 212
+ + E L++L Y + W L S L ++
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLY--QIDPNWTSRSDHSSNIKL--RIHSIQAELRRLLKS 240
Query: 213 YDH-----ILSDQYSRTVELNGHDMR-------RNLSTAWDTVGEYAT---------DLF 251
+ +L + + N ++ R D + T
Sbjct: 241 KPYENCLLVLLNVQNAKA-WNAFNLSCKILLTTRFKQVT-DFLSAATTTHISLDHHSMTL 298
Query: 252 TK-EAVQL--------IEDQPVDK----PLFLYLAHLAAHAGNAGKHLEAPQETINQFQY 298
T E L +D P + P L + + + T + +++
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII---------AESIRDGLATWDNWKH 349
Query: 299 ITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNW 358
+ + ++ S+ + A RK + + + +F
Sbjct: 350 VN------CDKLTTIIESSLNVLEPAEYRK--MFDRLSVFPPS----------------- 384
Query: 359 GSNYPYRGVKNTLWEGGVKVPA----ILWSPQIQQNPRVSLQMMHISDWLPTLYTAAGGD 414
+P ++W I+ + V + +H
Sbjct: 385 -----------------AHIPTILLSLIWFDVIKSDVMVVVNKLHK-------------- 413
Query: 415 TSRLPLNIDGLDQWSSLLLNTPSRRNSNIDGLDQWSSLLLNTPSRR--NSVLINIDEKKR 472
SL+ P +I + L + + + +++ +
Sbjct: 414 --------------YSLVEKQPKESTISIPSIYL--ELKVKLENEYALHRSIVDHYNIPK 457
Query: 473 TAAVRLDSWKLVLGTQENGTMDGYYGQTRSNKVPLLNFNAIV----ESKTYQSLQQLSQN 528
T DS L+ +D Y+ ++ I + + +
Sbjct: 458 T----FDSDDLIP-----PYLDQYF------------YSHIGHHLKNIEHPERMTLFRM- 495
Query: 529 IFLPISNID-KMRSTRQQATIHCGANPAPMTPSPCTNGPCYLFNLGNDPCE-QNNIASSR 586
+FL ++ K+R S N + N + I +
Sbjct: 496 VFLDFRFLEQKIRHD-----------------STAWNASGSILNTLQQLKFYKPYICDND 538
Query: 587 PDISSQLYELLKY---HRRTLVPQSHEQPDLVQ 616
P + +L + L+ + DL++
Sbjct: 539 PKYERLVNAILDFLPKIEENLI--CSKYTDLLR 569
Score = 31.4 bits (70), Expect = 1.2
Identities = 24/226 (10%), Positives = 55/226 (24%), Gaps = 65/226 (28%)
Query: 453 LLNTPSRRNSV--LINIDEKKRTAAVR--LDSWKLVLGTQENGTMDGYYGQTRSNKVPLL 508
++ + + L K+ V+ ++ VL M + R +
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE---VLRINYKFLMSPIKTEQRQPSMMTR 110
Query: 509 NFNAIVESKTYQSLQQLSQNIFLPISNIDKMRSTRQQA---------TIH----CG---- 551
+ + + Y Q ++ +S + RQ I G
Sbjct: 111 MYIEQRD-RLYNDNQVFAK---YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV 166
Query: 552 ANPAPMTPSPCTNGPCYLF--NLGNDPCEQNNIASSRPDISSQLYELLKYHRRTLVPQSH 609
A ++ +F NL N + + L +L ++ + P
Sbjct: 167 ALDVCLSYKVQCKMDFKIFWLNLKNCNSPE--------TVLEMLQKL--LYQ--IDPNWT 214
Query: 610 EQPDLVQADPKRFN-----------------------DTWSPWIYR 632
+ D R + + + +
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260
>1ei6_A Phosphonoacetate hydrolase; zinc,; HET: TLA; 2.10A {Pseudomonas
fluorescens} SCOP: c.76.1.4
Length = 406
Score = 41.7 bits (97), Expect = 6e-04
Identities = 33/206 (16%), Positives = 59/206 (28%), Gaps = 14/206 (6%)
Query: 72 NRRTYAALTKSTTLTLLIV-YGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQPVCT- 129
N R+Y L+ + T+ + + ++ P + L G +L P T
Sbjct: 7 NSRSYR-LSSAPTIVICVDGCEQEYIN-QAIQAGQAPFLAELTGFGTVLTGDCVVPSFTN 64
Query: 130 PSRASLMTGKYPIHTGMQGPPIWGAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFR 189
P+ S++TG P G I G E L + L T G
Sbjct: 65 PNNLSIVTGAPPSVHG-----ICGNFFFDQETQEEVLMNDAKYLRAPTILAEMAKAG-QL 118
Query: 190 REYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEYATD 249
+ G+ + E ++ + +V
Sbjct: 119 VAVVTAKDKLRNLLGH--QLKGICFSAEKADQVNLEEHGVENILARVGMPVPSVYSADLS 176
Query: 250 LFTKEAVQLIEDQPVDKPLFLYLAHL 275
F A + ++P F+YL+
Sbjct: 177 EFVFAAGLSLLTN--ERPDFMYLSTT 200
>2gso_A Phosphodiesterase-nucleotide pyrophosphatase; alpha beta, NPP,
hydrolase; 1.30A {Xanthomonas axonopodis PV} PDB: 2gsn_A
2gsu_A* 2rh6_A*
Length = 393
Score = 39.7 bits (92), Expect = 0.002
Identities = 42/242 (17%), Positives = 76/242 (31%), Gaps = 48/242 (19%)
Query: 102 NEIPTPNIDALAYNGIILNNMYAQ-PVCT-PSRASLMTGKYPIHTGMQGPPIWGAEPRGV 159
+ TPN+ LA G+ M P T P+ +L+TG P H G+ +
Sbjct: 23 DRGITPNLSHLAREGVRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDPT---- 78
Query: 160 PLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHFGYLNGVISYYDHILSD 219
L +L + +W G P++ G E+ G +
Sbjct: 79 -LGGFWLSK------SEAVGDARWWGGE------PVWVGVENT-----GQHAATWSWPGS 120
Query: 220 QYSRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHLAAHA 279
+ + DT + + Q + + L
Sbjct: 121 EAAIKGVRPSQWRHYQKGVRLDTRVDAVRGWLATDGAQ--------RNRLVTL------- 165
Query: 280 GNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVISALQRKGMLENSIIIFM 339
+ E E + + YA V+ +D ++G +++ +QR G + II +
Sbjct: 166 -----YFEHVDEAGHDHGPESRQ----YADAVRAVDAAIGRLLAGMQRDGTRARTNIIVV 216
Query: 340 SD 341
SD
Sbjct: 217 SD 218
>3szy_A Phosphonoacetate hydrolase; alkaline phosphatase superfamily; 1.35A
{Sinorhizobium meliloti} PDB: 3szz_A 3t00_A 3t01_A
3t02_A
Length = 427
Score = 36.3 bits (83), Expect = 0.029
Identities = 32/213 (15%), Positives = 52/213 (24%), Gaps = 23/213 (10%)
Query: 72 NRRTYAALTKSTTLTLLIVY---GWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQPVC 128
N R Y + + L + P + + G + P
Sbjct: 15 NGRRYPWPRVPA---IAVCLDGCEPAYLD-AAIDAGLMPALKRIKERGAVRLAHSVIPSF 70
Query: 129 T-PSRASLMTGKYPIHTGMQGPPIWGAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLG- 186
T P+ S+ TG P G I G E + + L T + G
Sbjct: 71 TNPNNLSIATGSPPAVHG-----ICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGA 125
Query: 187 ----FFRREYTPLYRGFESHFGYLNGVISYYDHILSDQYSRTVELNGHDMRRNLSTAWDT 242
++ G F V + + E + L
Sbjct: 126 RVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEK---SDKATRAEHGIDNASAWLGRPVPE 182
Query: 243 VGEYATDLFTKEAVQLIEDQPVDKPLFLYLAHL 275
V A F A + + +P +YL
Sbjct: 183 VYSAALSEFVFAAGVKLLRE--FRPDIMYLTTT 213
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent
enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A
{Thermus thermophilus}
Length = 376
Score = 35.6 bits (83), Expect = 0.041
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 2/30 (6%)
Query: 140 YPIHTGMQGPPIWGAEPRGVPLTERFLPEY 169
YP + G + +PL E L +
Sbjct: 121 YPSYFG--AARVASLRTFLIPLREDGLADL 148
>3q3q_A Alkaline phosphatase; hydrolase; 1.95A {Sphingomonas SP}
Length = 565
Score = 34.8 bits (78), Expect = 0.089
Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 8/88 (9%)
Query: 71 PNRRTYAALTKSTTLTLLIVY---GWNDLSFHGSNEIPTPNIDALAYNGIILNNM---YA 124
P + L + I + S + + T + L G + +A
Sbjct: 28 PAPAARSIAATPPKLIVAISVDQFSADLFSEY--RQYYTGGLKRLTSEGAVFPRGYQSHA 85
Query: 125 QPVCTPSRASLMTGKYPIHTGMQGPPIW 152
P ++++TG P TG+ +
Sbjct: 86 ATETCPGHSTILTGSRPSRTGIIANNWF 113
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK
family, structur genomics, structural genomics
consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo
sapiens} SCOP: c.37.1.8
Length = 211
Score = 33.1 bits (76), Expect = 0.20
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 210 ISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVG--EYATDLFTKEA 255
S + + D Y RT+ ++G L W+ G E+ D +
Sbjct: 65 DSDCEVLGEDTYERTLMVDGESATIILLDMWENKGENEWLHDHCMQVG 112
>3nkq_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2;
lysophospholipase D, autotaxin, ENPP2, lysophosphatidic
acid hydrolase; HET: NAG BMA MAN NKQ; 1.70A {Mus
musculus} PDB: 3nkm_A* 3nkn_A* 3nkp_A* 3nko_A* 3nkr_A*
2xrg_A* 2xr9_A*
Length = 831
Score = 32.6 bits (73), Expect = 0.47
Identities = 39/284 (13%), Positives = 75/284 (26%), Gaps = 66/284 (23%)
Query: 86 TLLIVYGWNDLSFHGSNEIPTPNIDALAYNGIILNNMYAQ-PVCT-PSRASLMTGKYPIH 143
++ S+ PNI+ L G M P T P+ +L TG YP
Sbjct: 130 LIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHAPYMRPVYPTKTFPNLYTLATGLYP-- 187
Query: 144 TGMQGPPIWGAEPRGVPLTERFLPEYLRELGYSTKAIGKWHLGFFRREYTPLYRGFESHF 203
E G+ + P + +
Sbjct: 188 -----------ESHGIVGNSMYDPVFDATFHLRGREKFNHR------------------- 217
Query: 204 GYLNGVISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVGEYATDLFTKEAVQLIEDQP 263
T G R + W + + T + P
Sbjct: 218 -----------WWGGQPLWITATKQG---VRAGTFFWSVSIPHERRILT---ILQWLSLP 260
Query: 264 VDKPLFLYLAHLAAHAGNAGKHLEAPQETINQFQYITDPNRRTYAAMVKKLDDSVGTVIS 323
++ +Y + E + + P ++++D +VG ++
Sbjct: 261 DNERPSVYAFYS---------------EQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMD 305
Query: 324 ALQRKGMLENSIIIFMSDNGAPTVEYRETSNYRNWGSNYPYRGV 367
L++ + +IF+ D+G V T N+ +N +
Sbjct: 306 GLKQLKLHRCVNVIFVGDHGMEDVTCDRTEFLSNYLTNVDDITL 349
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A
{Staphylococcus aureus}
Length = 404
Score = 31.8 bits (73), Expect = 0.63
Identities = 6/31 (19%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Query: 140 YPIHTGMQGPPIWGAEPRGVPLTER-FLPEY 169
Y + G + +P + L +LP++
Sbjct: 143 YTDYLA--GVLLADGKPVPLNLEPPHYLPDW 171
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas
aeruginosa}
Length = 412
Score = 31.8 bits (73), Expect = 0.72
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Query: 140 YPIHTGMQGPPIWGAEPRGVPLTE--RFLPEY 169
YPIH G I GA+ R VPL F E
Sbjct: 133 YPIHIY--GAVIAGAQVRSVPLVPGIDFFNEL 162
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for
structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter
pylori 26695}
Length = 376
Score = 30.2 bits (69), Expect = 1.9
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Query: 140 YPIHTGMQGPPIWGAEPRGVPLTE--RFLPEYLRELGYSTKAI 180
Y I+ G A+ +PLT+ F P + +
Sbjct: 118 YQIYEG--AAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLV 158
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase,
conformational change, cysteine-modified, G-protein
hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B*
2ht6_A*
Length = 192
Score = 29.6 bits (67), Expect = 2.0
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 210 ISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVG--EYATDLFTKEA 255
S + + D Y RT+ ++G L W+ G E+ D +
Sbjct: 34 DSDXEVLGEDTYERTLMVDGESATIILLDMWENKGENEWLHDHCMQVG 81
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.8 bits (63), Expect = 3.8
Identities = 11/48 (22%), Positives = 15/48 (31%), Gaps = 19/48 (39%)
Query: 469 EKKRTAAVRLD-SWKLVLGTQENGTMDGYYGQTRSNKVPLLNFNAIVE 515
EK+ +L S KL Y + P L A +E
Sbjct: 18 EKQALK--KLQASLKL-------------YA---DDSAPALAIKATME 47
Score = 27.6 bits (60), Expect = 7.8
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 24/44 (54%)
Query: 311 VKKLDDSVGTVISALQRKGMLENSIIIFMSDNGAP------TVE 348
+KKL ++L+ ++ D+ AP T+E
Sbjct: 22 LKKLQ-------ASLK----------LYADDS-APALAIKATME 47
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP
binding, GTP hydrolysis, structural genomics, structural
genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens}
SCOP: c.37.1.8
Length = 196
Score = 28.3 bits (64), Expect = 5.8
Identities = 8/41 (19%), Positives = 13/41 (31%), Gaps = 5/41 (12%)
Query: 210 ISYYDHILSDQYSRTVELNGHDMRRNLSTAWDTVG--EYAT 248
I YD L Y ++ + + DT G +
Sbjct: 54 IWEYDPTLESTYRHQATIDDEVVSMEI---LDTAGQEDTIQ 91
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.134 0.411
Gapped
Lambda K H
0.267 0.0492 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 9,610,663
Number of extensions: 572125
Number of successful extensions: 1229
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1155
Number of HSP's successfully gapped: 58
Length of query: 632
Length of database: 6,701,793
Length adjustment: 99
Effective length of query: 533
Effective length of database: 3,937,614
Effective search space: 2098748262
Effective search space used: 2098748262
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.5 bits)