Query psy12302
Match_columns 303
No_of_seqs 191 out of 529
Neff 2.0
Searched_HMMs 29240
Date Fri Aug 16 15:32:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12302.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12302hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoy_A Isocitrate dehydrogenas 100.0 1E-50 3.5E-55 379.8 17.4 200 34-302 1-200 (402)
2 3us8_A Isocitrate dehydrogenas 100.0 7.5E-45 2.6E-49 342.5 18.8 205 29-302 19-223 (427)
3 1lwd_A Isocitrate dehydrogenas 100.0 6.2E-43 2.1E-47 326.9 18.7 199 35-302 3-202 (413)
4 1zor_A Isocitrate dehydrogenas 100.0 5.6E-43 1.9E-47 325.6 17.9 198 34-302 1-198 (399)
5 2qfy_A Isocitrate dehydrogenas 100.0 7.3E-43 2.5E-47 327.9 18.5 202 32-302 14-218 (427)
6 2uxq_A Isocitrate dehydrogenas 100.0 8.4E-43 2.9E-47 325.1 18.4 198 36-302 2-199 (402)
7 1hqs_A Isocitrate dehydrogenas 99.9 6.5E-24 2.2E-28 200.2 1.5 151 138-302 55-210 (423)
8 2d1c_A Isocitrate dehydrogenas 99.8 2E-19 6.8E-24 173.6 11.8 159 34-302 9-180 (496)
9 3blx_B Isocitrate dehydrogenas 99.8 9.4E-19 3.2E-23 162.2 9.8 127 138-302 50-178 (354)
10 2e0c_A 409AA long hypothetical 99.7 2.8E-19 9.6E-24 168.0 3.5 149 138-302 60-212 (409)
11 1tyo_A Isocitrate dehydrogenas 99.7 9.6E-20 3.3E-24 172.6 -0.1 151 137-302 70-222 (435)
12 1w0d_A 3-isopropylmalate dehyd 99.7 1E-18 3.5E-23 160.7 6.0 135 138-302 30-169 (337)
13 2iv0_A Isocitrate dehydrogenas 99.7 1.4E-18 4.8E-23 163.6 3.4 149 138-302 60-212 (412)
14 1x0l_A Homoisocitrate dehydrog 99.7 1.9E-17 6.6E-22 152.3 6.5 128 137-302 29-159 (333)
15 3blx_A Isocitrate dehydrogenas 99.7 4.6E-17 1.6E-21 150.7 8.8 126 137-302 45-172 (349)
16 2d4v_A Isocitrate dehydrogenas 99.7 3.1E-18 1.1E-22 162.0 0.8 153 137-302 61-219 (429)
17 2y3z_A 3-isopropylmalate dehyd 99.7 2E-17 6.9E-22 153.6 4.7 135 137-302 35-178 (359)
18 1wpw_A 3-isopropylmalate dehyd 99.7 9E-17 3.1E-21 148.0 7.3 125 137-302 33-159 (336)
19 3flk_A Tartrate dehydrogenase/ 99.6 2E-16 6.7E-21 147.1 5.3 135 137-302 37-181 (364)
20 1cnz_A IPMDH, IMDH, protein (3 99.6 6.4E-16 2.2E-20 143.4 5.5 140 137-302 36-185 (363)
21 1vlc_A 3-isopropylmalate dehyd 99.6 1.1E-15 3.7E-20 142.5 6.3 137 137-302 44-189 (366)
22 3ty4_A Probable homoisocitrate 99.6 1.9E-15 6.6E-20 140.8 7.7 134 137-302 42-177 (366)
23 1a05_A IPMDH, IMDH, 3-isopropy 99.6 1.4E-15 4.8E-20 140.7 6.2 139 137-302 33-180 (358)
24 3dms_A Isocitrate dehydrogenas 99.5 1.4E-14 4.9E-19 137.0 5.3 150 137-302 71-229 (427)
25 3vmk_A 3-isopropylmalate dehyd 99.4 2.8E-13 9.5E-18 126.7 5.1 140 137-302 45-194 (375)
26 3r8w_A 3-isopropylmalate dehyd 99.1 5.6E-11 1.9E-15 112.4 4.8 140 137-302 74-222 (405)
27 3u1h_A 3-isopropylmalate dehyd 98.8 5.1E-09 1.7E-13 98.8 7.5 138 137-302 55-201 (390)
28 3udu_A 3-isopropylmalate dehyd 98.7 8.1E-09 2.8E-13 96.4 4.8 136 137-302 38-182 (361)
29 1s3c_A Arsenate reductase; ARS 50.3 10 0.00035 30.2 2.8 66 152-218 33-100 (141)
30 3st7_A Capsular polysaccharide 33.7 1.1E+02 0.0038 25.7 6.8 55 230-286 283-343 (369)
31 3rdw_A Putative arsenate reduc 32.9 46 0.0016 25.5 4.0 68 149-217 33-103 (121)
32 1tks_A 3,4-dihydroxy-2-butanon 31.4 21 0.00071 31.4 2.0 94 156-259 40-134 (204)
33 3mio_A DHBP synthase, 3,4-dihy 30.3 29 0.00098 30.6 2.7 53 156-215 39-91 (206)
34 3fcg_A F1 capsule-anchoring pr 24.8 69 0.0024 24.7 3.7 23 249-271 57-79 (90)
35 1g57_A DHBP synthase, 3,4-dihy 24.4 45 0.0015 29.4 2.8 90 156-255 48-138 (217)
36 1k4i_A 3,4-dihydroxy-2-butanon 23.5 45 0.0015 30.0 2.7 52 156-214 47-98 (233)
37 2oxg_Z SOXZ protein; immunoglo 21.3 1.2E+02 0.0041 23.6 4.4 29 239-267 72-100 (108)
38 3l78_A Regulatory protein SPX; 21.2 70 0.0024 24.2 3.1 66 151-217 30-97 (120)
39 3gkx_A Putative ARSC family re 20.9 80 0.0027 24.1 3.4 67 150-217 33-103 (120)
40 2ky8_A Methyl-CPG-binding doma 20.3 1.4E+02 0.0048 22.0 4.4 35 219-265 10-44 (72)
No 1
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A
Probab=100.00 E-value=1e-50 Score=379.85 Aligned_cols=200 Identities=56% Similarity=0.916 Sum_probs=188.9
Q ss_pred ccceeecCCeEEecCcchhHHHHHHHHhhhcccchhhhhhhhhhhhhhhhhcCcchhhhhhhhhhhccccccchhhhhhh
Q psy12302 34 DSRIVAKNPVVEMDGDEMTRIIWENIKEKLIFPYVKVCMSIIIFNKFQAFLLFPEKSEEMNLEWIKIPCLQCSDKAKMFF 113 (303)
Q Consensus 34 ~~kI~v~nPvVemdGDEMTRiiw~~IkekLI~Pyv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (303)
|+||+|++|||+|+||||+|++|+.||+.++.|++
T Consensus 1 ~~~i~~~~~i~~i~GDei~~e~~~~i~~v~~~~~~--------------------------------------------- 35 (402)
T 4aoy_A 1 MSKIKMKVPLVEMDGDEMTRIIWRLIKENLLEPYI--------------------------------------------- 35 (402)
T ss_dssp -CCEECSSCEEEEECCHHHHHHHHHHHHHHTTTTE---------------------------------------------
T ss_pred CCcccccCcEEEECCCchHHHHHHHHHHHHHhcCC---------------------------------------------
Confidence 57999999999999999999999999999999999
Q ss_pred hhcccccchhhhhhhhhhhhccccccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccc
Q psy12302 114 LSSSLKHGFMYFMASRIQIISNIIDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKM 193 (303)
Q Consensus 114 ~~~~~~~~~~~~~~~~~q~i~~~iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkm 193 (303)
+++++|||||.++||+|+++++.|+++|+|+++|++|||++||+.+|++||+|+++
T Consensus 36 ------------------------~i~~~~~d~G~~~~~~tg~~lp~etl~aik~~~v~lkGa~~tP~~~~~~~~~l~~~ 91 (402)
T 4aoy_A 36 ------------------------ELNTEYYDLGLENRDKTEDQVTIDAARAIQKYGVGVKCATITPNAQRVEEYNLKKM 91 (402)
T ss_dssp ------------------------ECCEEEEECCHHHHHHHTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHTTCSSC
T ss_pred ------------------------CeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECcccCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcCCeEeecceeecCCCCCCCCcccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEee
Q psy12302 194 WLSPNGTIRNILGGTVFREPIICKNIPKIVPGWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEF 273 (303)
Q Consensus 194 w~SPNGtIRniLgGTVFRePIi~knIp~iVpgW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~f 273 (303)
|+|||++||+.||++++|+|+.++++|..+++|..+|+|.||+.||+|.+.|+.++++|+++++|++.+|..++..+++|
T Consensus 92 ~~s~n~~LR~~Ldlyan~rPv~~~~i~~~~~~~~~DivIvREnteg~Y~g~e~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (402)
T 4aoy_A 92 WKSPNGTIRAILDGTVFRAPIVVNSIKPFVKGWKKPISIARHAYGDVYKNVEYYVPSAGKAELVFTSENGEVSRQTIHEF 171 (402)
T ss_dssp CCCHHHHHHHHHTCEEEEEECCCTTSCCSBTTCCBCCEEEEC------CCEEEEECSCEEEEEEEEETTSCEEEEEEEEE
T ss_pred ccChHHHHHHHhCCeEEeeeEeccCCCCcCCCCCCCEEEEEeccCCeecCceeeccCccceeeeeeccCCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997788889999
Q ss_pred cCCCeEEEeccChhhHHHHHHHhhhchhc
Q psy12302 274 KTPGVALAMYNTTESIESFAHSSFQVSFI 302 (303)
Q Consensus 274 k~~GVal~myNt~eSI~~FAhs~Fq~al~ 302 (303)
+++||+++|+||.++++.+||.+|++|+.
T Consensus 172 ~~~gv~~~~~~t~~~~eRiar~AF~~A~~ 200 (402)
T 4aoy_A 172 DGPGVIMGMHNTDKSIRSFARACFNYALD 200 (402)
T ss_dssp SSCEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred cCCeeEEEEEecHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999973
No 2
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.5e-45 Score=342.46 Aligned_cols=205 Identities=60% Similarity=1.047 Sum_probs=194.4
Q ss_pred eccccccceeecCCeEEecCcchhHHHHHHHHhhhcccchhhhhhhhhhhhhhhhhcCcchhhhhhhhhhhccccccchh
Q psy12302 29 FQDATDSRIVAKNPVVEMDGDEMTRIIWENIKEKLIFPYVKVCMSIIIFNKFQAFLLFPEKSEEMNLEWIKIPCLQCSDK 108 (303)
Q Consensus 29 ~~~~~~~kI~v~nPvVemdGDEMTRiiw~~IkekLI~Pyv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (303)
+-+++++||+|++||++|+||+|.+.||+.+++.|..|++
T Consensus 19 ~~~~~~~~i~~~~~I~vipGDGIGpEI~~~~~~vL~~~~~---------------------------------------- 58 (427)
T 3us8_A 19 YFQSMMAKIKVANPVVELDGDEMTRIIWQFIKDKLIHPYL---------------------------------------- 58 (427)
T ss_dssp ------CCEECCSCEEEEECCHHHHHHHHHHHHHHTTTTE----------------------------------------
T ss_pred EeecccccccccceEEEEcCCcccHHHHHHHHHHHHhcCC----------------------------------------
Confidence 3355779999999999999999999999999999999888
Q ss_pred hhhhhhhcccccchhhhhhhhhhhhccccccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhh
Q psy12302 109 AKMFFLSSSLKHGFMYFMASRIQIISNIIDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEF 188 (303)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~q~i~~~iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf 188 (303)
++++++||+|.++||+|+++++-|+++|+|+++|++|||+.||+.+||+||
T Consensus 59 -----------------------------~i~~~~~~~G~~~~~~tg~~lp~etl~aik~~da~LkGav~tP~~~~~~e~ 109 (427)
T 3us8_A 59 -----------------------------DLDLEYYDLGVENRDATDDQVTIDAANAIKKHGVGVKCATITPDEGRVEEF 109 (427)
T ss_dssp -----------------------------ECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHH
T ss_pred -----------------------------CeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCCccccccc
Confidence 999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCchhhhhhhcCCeEeecceeecCCCCCCCCcccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEE
Q psy12302 189 KLKKMWLSPNGTIRNILGGTVFREPIICKNIPKIVPGWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTF 268 (303)
Q Consensus 189 ~LKkmw~SPNGtIRniLgGTVFRePIi~knIp~iVpgW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~ 268 (303)
+|+++|+|||++||+.||++++++|++|+++|.++++|..||+|.||+.||+|.+.|+.+.++|+.++.|++++|+.+..
T Consensus 110 ~l~~~~~s~n~~LRk~LdlyanvRPv~~~~ip~~~~~~~~DivIvREnteg~Y~g~e~~~~~~~~~~l~~~~~~G~~~~~ 189 (427)
T 3us8_A 110 KLKKMWKSPNGTIRNILGGVIFREPIICKNVPRLVPGWTKPIIVGRHAFGDQYRATDFKFPGKGKLSIKFVGEDGQTIEH 189 (427)
T ss_dssp TCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEETTSCEEEE
T ss_pred cccccccCchHHHHHHhCCeEEecceeccCCCCCCCCCCCCEEEEEeCCCCccCCceeEEecCCcceeeeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987888
Q ss_pred EEEeecCCCeEEEeccChhhHHHHHHHhhhchhc
Q psy12302 269 KVFEFKTPGVALAMYNTTESIESFAHSSFQVSFI 302 (303)
Q Consensus 269 ~v~~fk~~GVal~myNt~eSI~~FAhs~Fq~al~ 302 (303)
.+++|+++||+.+|+||.++++.+||.+|++|+.
T Consensus 190 ~~~~~~~~~va~~~~~T~~~~eRiar~AFe~A~~ 223 (427)
T 3us8_A 190 DVYDAPGAGVALAMYNLDESITEFARASFNYGLQ 223 (427)
T ss_dssp EEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCcEEEEEeeCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999973
No 3
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=100.00 E-value=6.2e-43 Score=326.91 Aligned_cols=199 Identities=67% Similarity=1.131 Sum_probs=191.4
Q ss_pred cceeecCCeEEecCcchhHHHHHHHHhhhcccchhhhhhhhhhhhhhhhhcCcchhhhhhhhhhhccccccchhhhhhhh
Q psy12302 35 SRIVAKNPVVEMDGDEMTRIIWENIKEKLIFPYVKVCMSIIIFNKFQAFLLFPEKSEEMNLEWIKIPCLQCSDKAKMFFL 114 (303)
Q Consensus 35 ~kI~v~nPvVemdGDEMTRiiw~~IkekLI~Pyv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (303)
+||+|++||++|+||+|++.||+.+++.|+.|++
T Consensus 3 ~~i~~~~~i~~l~GDgiGpei~~~~~~vl~~~~~---------------------------------------------- 36 (413)
T 1lwd_A 3 QRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHV---------------------------------------------- 36 (413)
T ss_dssp CCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTE----------------------------------------------
T ss_pred CcceecccEEEecCCChhHHHHHHHHHHHHhCCC----------------------------------------------
Confidence 6999999999999999999999999999999998
Q ss_pred hcccccchhhhhhhhhhhhccccccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhccccc
Q psy12302 115 SSSLKHGFMYFMASRIQIISNIIDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMW 194 (303)
Q Consensus 115 ~~~~~~~~~~~~~~~~q~i~~~iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw 194 (303)
++++++||+|.+++|+|+++++-|+.+++|++++++|||+.||+.+||++++|+++|
T Consensus 37 -----------------------~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~da~LkGav~tP~~~~~~~~~~~~~~ 93 (413)
T 1lwd_A 37 -----------------------DVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEEFKLKKMW 93 (413)
T ss_dssp -----------------------ECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHHTCSSCC
T ss_pred -----------------------CeEEEEEecCHHHHhccCCcCcHHHHHHHHHCCEEEECCccCCCcccCccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhhcCCeEeecceeecCCCCCCCCcccceEEEeeccCccccceeeEecCCceEEEEEEcCCC-ceEEEEEEee
Q psy12302 195 LSPNGTIRNILGGTVFREPIICKNIPKIVPGWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQG-KVQTFKVFEF 273 (303)
Q Consensus 195 ~SPNGtIRniLgGTVFRePIi~knIp~iVpgW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g-~~~~~~v~~f 273 (303)
+|||++||+.||++++++|+.++++|+++|+|..||+|+||+.||+|.+.|+++.++|+.++.|++.+| ......+++|
T Consensus 94 ~s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divIvRe~t~g~Y~g~d~~~~~e~~~~~~~~~~~g~~~~~~~~~~~ 173 (413)
T 1lwd_A 94 KSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDGSSAKQWEVYNF 173 (413)
T ss_dssp CCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEETTCCCCEEEEEEEE
T ss_pred cCccHHHHHhcCCEEEEeeeeccCCCCCCCCCCCceEEEecccCCccCCceeEeccCCcceeeEeccCCccccccccccc
Confidence 999999999999999999998899999999999999999999999999999999999999999999877 4467788899
Q ss_pred cCCCeEEEeccChhhHHHHHHHhhhchhc
Q psy12302 274 KTPGVALAMYNTTESIESFAHSSFQVSFI 302 (303)
Q Consensus 274 k~~GVal~myNt~eSI~~FAhs~Fq~al~ 302 (303)
+.+|++.+|+||.++++.+||.+|++|..
T Consensus 174 ~~~~~~~~~~~T~~~~eRiar~AFe~A~~ 202 (413)
T 1lwd_A 174 PAGGVGMGMYNTDESISGFAHSCFQYAIQ 202 (413)
T ss_dssp SSCEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEEcHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999963
No 4
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima}
Probab=100.00 E-value=5.6e-43 Score=325.59 Aligned_cols=198 Identities=53% Similarity=0.911 Sum_probs=189.2
Q ss_pred ccceeecCCeEEecCcchhHHHHHHHHhhhcccchhhhhhhhhhhhhhhhhcCcchhhhhhhhhhhccccccchhhhhhh
Q psy12302 34 DSRIVAKNPVVEMDGDEMTRIIWENIKEKLIFPYVKVCMSIIIFNKFQAFLLFPEKSEEMNLEWIKIPCLQCSDKAKMFF 113 (303)
Q Consensus 34 ~~kI~v~nPvVemdGDEMTRiiw~~IkekLI~Pyv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (303)
++||+|++|||+|+||+|+++||+.+|++|+.|++
T Consensus 1 ~~~~~~~~~I~~l~GDgiG~ei~~~v~~~l~~~~~--------------------------------------------- 35 (399)
T 1zor_A 1 MEKVKVKNPIVELDGDEMARVMWKMIKEKLILPYL--------------------------------------------- 35 (399)
T ss_dssp CCCEECCSCEEEEECCHHHHHHHHHHHHHHTTTTE---------------------------------------------
T ss_pred CCcccccccEEEecCCcccHHHHHHHHHHHHhCCC---------------------------------------------
Confidence 46999999999999999999999999999999999
Q ss_pred hhcccccchhhhhhhhhhhhccccccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccc
Q psy12302 114 LSSSLKHGFMYFMASRIQIISNIIDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKM 193 (303)
Q Consensus 114 ~~~~~~~~~~~~~~~~~q~i~~~iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkm 193 (303)
++++++||+|.+++|+|+++++-|+.+++|+++|++|||+.||+.+||.+++|+++
T Consensus 36 ------------------------~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~da~lkGav~tP~~~~~~~~~~~~~ 91 (399)
T 1zor_A 36 ------------------------DIQLVYFDLGIKKRDETDDQITIEAAKAIKKYGVGVKCATITPDAERVKEYNLKKA 91 (399)
T ss_dssp ------------------------ECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHHTCSSC
T ss_pred ------------------------CeEEEEEeCCHHHHhccCCcCcHHHHHHHHHCCEEEEcCccCCCcccCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcCCeEeecceeecCCCCCCCCcccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEee
Q psy12302 194 WLSPNGTIRNILGGTVFREPIICKNIPKIVPGWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEF 273 (303)
Q Consensus 194 w~SPNGtIRniLgGTVFRePIi~knIp~iVpgW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~f 273 (303)
|+|||++||+.||++++++|+.++++|+++|+|+.||+|+||+.||+|.+.|+++.++|+.++.|+++ ......+++|
T Consensus 92 ~~s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divi~Re~t~g~Y~g~d~~~~~e~t~~~~y~~e--~~~~~~~~~~ 169 (399)
T 1zor_A 92 WKSPNATIRAYLDGTVFRKPIMVKNVPPLVKRWKKPIIIGRHAYGDIYNAVEAKVEGPAEVELVVRNK--ENKTLLVHKF 169 (399)
T ss_dssp CCCHHHHHHHHHTCEEEEEECCBTTBCCSBTTCCSCCEEEECCSSGGGGCEEEEECSSEEEEEEEESS--SCEEEEEEEE
T ss_pred ccCchHHHHHHhCCEEEEEEeecCCCCCcccCcCccceeeecccCCCcCCceeEecCCCcceeeEecc--ccccceeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 2235677888
Q ss_pred cCCCeEEEeccChhhHHHHHHHhhhchhc
Q psy12302 274 KTPGVALAMYNTTESIESFAHSSFQVSFI 302 (303)
Q Consensus 274 k~~GVal~myNt~eSI~~FAhs~Fq~al~ 302 (303)
+.+|++.+|+||.++++.+||.+|++|..
T Consensus 170 ~~~~~~~~~~~T~~~~eRiar~AFe~A~~ 198 (399)
T 1zor_A 170 EGNGVVMAMHNLEKSIRSFAQSCINYAIS 198 (399)
T ss_dssp SSCEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEecHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999963
No 5
>2qfy_A Isocitrate dehydrogenase [NADP]; rossmann fold, oxidoreductase; HET: AKG; 2.10A {Saccharomyces cerevisiae} PDB: 2qfw_A* 2qfx_A* 2qfv_A*
Probab=100.00 E-value=7.3e-43 Score=327.92 Aligned_cols=202 Identities=66% Similarity=1.078 Sum_probs=191.3
Q ss_pred ccccceeecCCeEEecCcchhHHHHHHHHhhhcccchhhhhhhhhhhhhhhhhcCcchhhhhhhhhhhccccccchhhhh
Q psy12302 32 ATDSRIVAKNPVVEMDGDEMTRIIWENIKEKLIFPYVKVCMSIIIFNKFQAFLLFPEKSEEMNLEWIKIPCLQCSDKAKM 111 (303)
Q Consensus 32 ~~~~kI~v~nPvVemdGDEMTRiiw~~IkekLI~Pyv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (303)
..++||+|++||++|+||||++.+|+.+++++++|++
T Consensus 14 ~~~~k~~~~~~I~~l~GDgig~evl~~~~~~~~~~~~------------------------------------------- 50 (427)
T 2qfy_A 14 HAFSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYL------------------------------------------- 50 (427)
T ss_dssp --CCCEECSSCEEEEECCHHHHHHHHHHHHHHTTTTE-------------------------------------------
T ss_pred cccccccceeeEEEecCCCHHHHHHHHHHHHhccCCC-------------------------------------------
Confidence 3457999999999999999999999999999999999
Q ss_pred hhhhcccccchhhhhhhhhhhhccccccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcc
Q psy12302 112 FFLSSSLKHGFMYFMASRIQIISNIIDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLK 191 (303)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~q~i~~~iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LK 191 (303)
++++.+||+|.+++|+|+++++-|+++|+|+++|++|||+.||+..|++|++|+
T Consensus 51 --------------------------~i~~~~~~~G~~~~~~~G~~lp~et~~ai~~~da~lkGav~tP~~~~~~e~~l~ 104 (427)
T 2qfy_A 51 --------------------------DVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDEARVKEFNLH 104 (427)
T ss_dssp --------------------------ECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHTTCS
T ss_pred --------------------------ceEEEEEecChHHHhccCCcCcHHHHHHHHHCCEEEECCcCCCCCcccchhhhc
Confidence 999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhhhhhhcCCeEeecceeecCCCCCCCCcccceEEEeeccCccccceeeEecCCceEEEEEEcCC--C-ceEEE
Q psy12302 192 KMWLSPNGTIRNILGGTVFREPIICKNIPKIVPGWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQ--G-KVQTF 268 (303)
Q Consensus 192 kmw~SPNGtIRniLgGTVFRePIi~knIp~iVpgW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~--g-~~~~~ 268 (303)
++|+|||++||+.||++++++|+.++|+|+++|||..|++|+||++||+|++.|+++..+++-.+.|++.+ | .....
T Consensus 105 ~~~~s~~~~lR~~ldlyan~RP~~~~~~~~l~~g~~~pl~i~R~~~g~~y~~~D~vivREnteg~Y~~~e~teG~~~~~~ 184 (427)
T 2qfy_A 105 KMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLIPGPGSLELVYKPSDPTTAQPQTL 184 (427)
T ss_dssp SCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCEEEEEEEECSSGGGGCEEEEECSSEEEEEEEEESCTTTSCCEEE
T ss_pred ccccchHHHHHHhcCCEEEecccccccchhhccCCCCCeeEeecccCCccCCeeEEEeccCccceeeeccccCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998766 6 44566
Q ss_pred EEEeecCCCeEEEeccChhhHHHHHHHhhhchhc
Q psy12302 269 KVFEFKTPGVALAMYNTTESIESFAHSSFQVSFI 302 (303)
Q Consensus 269 ~v~~fk~~GVal~myNt~eSI~~FAhs~Fq~al~ 302 (303)
.+++|+++||+++||||.++++.+||.+|++|..
T Consensus 185 ~~~~~~~~~v~~~~~~T~~~ieRIar~AFe~A~~ 218 (427)
T 2qfy_A 185 KVYDYKGSGVAMAMYNTDESIEGFAHSSFKLAID 218 (427)
T ss_dssp EEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCceEEEEEEEcHHHHHHHHHHHHHHHHH
Confidence 7788888999999999999999999999999963
No 6
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A*
Probab=100.00 E-value=8.4e-43 Score=325.06 Aligned_cols=198 Identities=49% Similarity=0.854 Sum_probs=192.7
Q ss_pred ceeecCCeEEecCcchhHHHHHHHHhhhcccchhhhhhhhhhhhhhhhhcCcchhhhhhhhhhhccccccchhhhhhhhh
Q psy12302 36 RIVAKNPVVEMDGDEMTRIIWENIKEKLIFPYVKVCMSIIIFNKFQAFLLFPEKSEEMNLEWIKIPCLQCSDKAKMFFLS 115 (303)
Q Consensus 36 kI~v~nPvVemdGDEMTRiiw~~IkekLI~Pyv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (303)
||+|++||++|+||+|++.+|+.+|+.|+.|++
T Consensus 2 ~~~~~~~i~~i~GDgig~ei~~~~~~vl~~~~~----------------------------------------------- 34 (402)
T 2uxq_A 2 KIQMKTPLVELDGDEMTRVLWPLIKDKLLLPFI----------------------------------------------- 34 (402)
T ss_dssp CBCCSSCEEEEECCHHHHHHHHHHHHHHTTTTB-----------------------------------------------
T ss_pred ceeeecceEEecCCCccHHHHHHHHHHHHhCCC-----------------------------------------------
Confidence 699999999999999999999999999999999
Q ss_pred cccccchhhhhhhhhhhhccccccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccC
Q psy12302 116 SSLKHGFMYFMASRIQIISNIIDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWL 195 (303)
Q Consensus 116 ~~~~~~~~~~~~~~~q~i~~~iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~ 195 (303)
+++++|||+|.+++|+|+++++-|+.+++|+++|++|||+.||+.+||++++|+++|+
T Consensus 35 ----------------------~~~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~LkGav~tP~~~~~~~~~~~~~~~ 92 (402)
T 2uxq_A 35 ----------------------DLQTEYYDLGIEERDRTNDQITIDAAEAIKKYGVGVKNATITPNQDRVEEYGLKEQWK 92 (402)
T ss_dssp ----------------------CCCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHHTCSSCCC
T ss_pred ----------------------CeEEEEEecCHHHHHhhCCcCCHHHHHHHHhCCEEEECCccCCCcccCcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhhhcCCeEeecceeecCCCCCCCCcccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecC
Q psy12302 196 SPNGTIRNILGGTVFREPIICKNIPKIVPGWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKT 275 (303)
Q Consensus 196 SPNGtIRniLgGTVFRePIi~knIp~iVpgW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~ 275 (303)
|||++||+.||++++++|+.++++|+.+|+|..||+|.||+.||+|.+.|+++.++|+++++|++.+|......+++|+.
T Consensus 93 s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divIvRE~teg~Y~g~e~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~ 172 (402)
T 2uxq_A 93 SPNATVRAMLDGTVFRKPIMVKNIKPSVRSWQKPIVVGRHAYGDFYKNAEIFAEAGGKLEIVVTDKNGKETRQTIMEVDE 172 (402)
T ss_dssp CHHHHHHHHHCCEEEEEECCCTTCCCSBTTCCSCCEEEEECSCGGGGCEEEEETTCEEEEEEEECTTSCEEEEEEEEESS
T ss_pred CchHHHHHHhCCeEEEEEEEcCCCCCCCCCCCCCeEEEeccCCCcccCcceeeccCCcceeeeeccCCccccccccccCC
Confidence 99999999999999999998999999999999999999999999999999999999999999999889878888999988
Q ss_pred CCeEEEeccChhhHHHHHHHhhhchhc
Q psy12302 276 PGVALAMYNTTESIESFAHSSFQVSFI 302 (303)
Q Consensus 276 ~GVal~myNt~eSI~~FAhs~Fq~al~ 302 (303)
+|++.+|+||.++++.+||.+|++|..
T Consensus 173 ~~~~~~~~~T~~~~eRiar~AFe~A~~ 199 (402)
T 2uxq_A 173 PAIVQGIHNTVASIGHFARACFEYSLD 199 (402)
T ss_dssp CEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEECHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999963
No 7
>1hqs_A Isocitrate dehydrogenase; glyoxylate bypass, bsidh, tricarboxylic acid cycle, oxidoreductase, protein phosphorylation, NADP; HET: CME CIT; 1.55A {Bacillus subtilis} SCOP: c.77.1.1
Probab=99.87 E-value=6.5e-24 Score=200.15 Aligned_cols=151 Identities=14% Similarity=0.096 Sum_probs=124.4
Q ss_pred ccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceeec
Q psy12302 138 DVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIICK 217 (303)
Q Consensus 138 Dv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~k 217 (303)
++++++||+|.+++|+|++.++-|+.+++|+++|++|||+.||+ +++|+|||.+||+.||+.++++|+.
T Consensus 55 ~i~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~lkGav~tP~---------~~~~~s~nl~LRk~LdlyanvRPv~-- 123 (423)
T 1hqs_A 55 KITWKEVYAGEKAYNKTGEWLPAETLDVIREYFIAIKGPLTTPV---------GGGIRSLNVALRQELDLFVCLRPVR-- 123 (423)
T ss_dssp CCEEEECCCTHHHHHHHSCSSCHHHHHHHHHHCEEEECCCCCCS---------SSSSCCHHHHHHHHTTCCEEEEEEE--
T ss_pred ceEEEEEecCHHHHHhhCCcCcHHHHHHHHHCCEEEECCccCCC---------CcCcCChhHHHHHHcCCEEEEEEEe--
Confidence 89999999999999999999999999999999999999999994 4689999999999999999999965
Q ss_pred CCCCCCCCc----ccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEEE-eccChhhHHHH
Q psy12302 218 NIPKIVPGW----TNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVALA-MYNTTESIESF 292 (303)
Q Consensus 218 nIp~iVpgW----~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal~-myNt~eSI~~F 292 (303)
.+|.+...| .-+|+|.||..+|+|...++. .|+|.++.+++.. ++...+..+.|. .++|++ ++||.++++.+
T Consensus 124 ~~pg~~splk~~~~vDivIvREnteg~Y~G~e~~-~g~~~~~~v~~~~-~~~~~~~~~~~~-~~~a~~~~~~T~~~~eRi 200 (423)
T 1hqs_A 124 YFTGVPSPVKRPEDTDMVIFRENTEDIYAGIEYA-KGSEEVQKLISFL-QNELNVNKIRFP-ETSGIGIKPVSEEGTSRL 200 (423)
T ss_dssp CCTTCCCSBSCGGGCEEEEEEECSCGGGGCCEEC-TTCHHHHHHHHHH-HHHSCCCCCSCG-GGEEEEEEEEEHHHHHHH
T ss_pred ccCCCCCCCCCCCCCcEEEEecCCCCeecccccc-cCCccccceeccc-cccccccccccC-CceEEEEEEEcHHHHHHH
Confidence 666665554 457999999999999998876 5666555555432 122223334454 367765 99999999999
Q ss_pred HHHhhhchhc
Q psy12302 293 AHSSFQVSFI 302 (303)
Q Consensus 293 Ahs~Fq~al~ 302 (303)
||.+|++|..
T Consensus 201 ar~AFe~A~~ 210 (423)
T 1hqs_A 201 VRAAIDYAIE 210 (423)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999973
No 8
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus}
Probab=99.80 E-value=2e-19 Score=173.57 Aligned_cols=159 Identities=17% Similarity=0.177 Sum_probs=130.1
Q ss_pred ccceeec----CCeEEecCc----chhHHHHHHHHhhhcccchhhhhhhhhhhhhhhhhcCcchhhhhhhhhhhcccccc
Q psy12302 34 DSRIVAK----NPVVEMDGD----EMTRIIWENIKEKLIFPYVKVCMSIIIFNKFQAFLLFPEKSEEMNLEWIKIPCLQC 105 (303)
Q Consensus 34 ~~kI~v~----nPvVemdGD----EMTRiiw~~IkekLI~Pyv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (303)
.+||.++ -+|+.+.|| ||++..|+-++.. .+
T Consensus 9 ~~~i~~~~~g~~~IavipGDGIGpEV~~~a~~VL~a~----~~------------------------------------- 47 (496)
T 2d1c_A 9 GKKMHVLEDGRKLITVIPGDGIGPECVEATLKVLEAA----KA------------------------------------- 47 (496)
T ss_dssp SCEEEECTTSCEEEEEECCSTTHHHHHHHHHHHHHHT----TC-------------------------------------
T ss_pred CceeEeccCCCEEEEEEcCCCCCHHHHHHHHHHHHhc----CC-------------------------------------
Confidence 5677776 579999999 9999999998864 44
Q ss_pred chhhhhhhhhcccccchhhhhhhhhhhhccccccccceeeCCCCccccCC-ChhHHHHHHHHHHhcccccccccCchhhH
Q psy12302 106 SDKAKMFFLSSSLKHGFMYFMASRIQIISNIIDVECLYYDLGLPHRDATE-DQVTVDAAVAIKKHNVGIKCATITPDEAR 184 (303)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~q~i~~~iDv~~~yyDLgl~~RD~T~-DqVtvDAA~Aikk~~VgiKCATITPdeaR 184 (303)
++++++||+|.+++|+|+ ++++-|+.+++|++++++|||+.||+.
T Consensus 48 --------------------------------~ie~~~~~~G~~~~~~~G~~~lp~etle~ik~~daiLkGavgtP~~-- 93 (496)
T 2d1c_A 48 --------------------------------PLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPVG-- 93 (496)
T ss_dssp --------------------------------CEEEEECCCSHHHHTTTCTTSCCHHHHHHHHHHCEEEECCCCCCSS--
T ss_pred --------------------------------CeEEEEEecCHHHHhccCCCcCcHHHHHHHHHCCEEEECCccCCCc--
Confidence 899999999999999999 999999999999999999999999963
Q ss_pred HHhhhcccccCCchhhhhhhcCCeEeecceeecCCCCCCCCc---ccceEEEeeccCccccceeeEecCCceEEEEEEcC
Q psy12302 185 VKEFKLKKMWLSPNGTIRNILGGTVFREPIICKNIPKIVPGW---TNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDN 261 (303)
Q Consensus 185 VkEf~LKkmw~SPNGtIRniLgGTVFRePIi~knIp~iVpgW---~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~ 261 (303)
++|+|||.+||+.||+.++++| |+++|.+.... .-.++|-|..-+|.|-.
T Consensus 94 -------~~~~s~~l~LRk~LdLyaNlRP--~k~~pgl~splk~~~vD~vIVREnTEG~Y~G------------------ 146 (496)
T 2d1c_A 94 -------YGEKSANVTLRKLFETYANVRP--VREFPNVPTPYAGRGIDLVVVRENVEDLYAG------------------ 146 (496)
T ss_dssp -------SSSCCHHHHHHHHTTCCEEEEE--EECBTTBCCTTTTSCCEEEEEEECSSBGGGC------------------
T ss_pred -------ccccChHHHHHHHhCCEEEEEE--EeecCCCCccccCCCccEEEEeeCcCceEec------------------
Confidence 4899999999999999999999 77888874221 22344444444444432
Q ss_pred CCceEEEEEEeecCCCeEEEec-cChhhHHHHHHHhhhchhc
Q psy12302 262 QGKVQTFKVFEFKTPGVALAMY-NTTESIESFAHSSFQVSFI 302 (303)
Q Consensus 262 ~g~~~~~~v~~fk~~GVal~my-Nt~eSI~~FAhs~Fq~al~ 302 (303)
...+ + ++|+|++++ ||.++++.+||.+|++|..
T Consensus 147 --~e~~--~----~~~va~~~~v~Tr~~ieRIar~AFe~A~~ 180 (496)
T 2d1c_A 147 --IEHM--Q----TPSVAQTLKLISWKGSEKIVRFAFELARA 180 (496)
T ss_dssp --CEEE--E----ETTEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred --eeEe--c----CCCeEEEEEEecHHHHHHHHHHHHHHHHh
Confidence 1111 1 468999977 9999999999999999974
No 9
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B
Probab=99.76 E-value=9.4e-19 Score=162.21 Aligned_cols=127 Identities=22% Similarity=0.195 Sum_probs=109.3
Q ss_pred ccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceeec
Q psy12302 138 DVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIICK 217 (303)
Q Consensus 138 Dv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~k 217 (303)
++++++||+|.++ |+|++.++-|+.+++|++++++|||+.||+. .+|+|||.+||+.||+.++++|+.
T Consensus 50 ~i~~~~~~~G~~~-~~~g~~lp~~tl~~~~~~da~l~Gav~~P~~---------~~~~s~~l~lR~~ldlyan~RP~~-- 117 (354)
T 3blx_B 50 PIEWESCDVSPIF-VNGLTTIPDPAVQSITKNLVALKGPLATPIG---------KGHRSLNLTLRKTFGLFANVRPAK-- 117 (354)
T ss_dssp SEECCCCCCCCEE-ETTEEECCHHHHHHHHHHSEEEECCCCCC-------------CCCHHHHHHHHHTEEEEEEEEE--
T ss_pred CeEEEEEEechhh-hhhCCCCCHHHHHHHHHCCEEEECCccCCCC---------ccccCchHHHHHHcCCEEEEEEec--
Confidence 8899999999999 9999999999999999999999999999974 279999999999999999999954
Q ss_pred CCCCCCCCcc-cceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEE-EeccChhhHHHHHHH
Q psy12302 218 NIPKIVPGWT-NSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVAL-AMYNTTESIESFAHS 295 (303)
Q Consensus 218 nIp~iVpgW~-~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal-~myNt~eSI~~FAhs 295 (303)
++|.+.+.|. -.++|.|+..+|.|...+..+ .+++|. .+++|.++++.+||.
T Consensus 118 ~~pg~~s~~~~vD~vivREnteg~Y~g~e~~~--------------------------~~~~a~~~~~~T~~~~eRiar~ 171 (354)
T 3blx_B 118 SIEGFKTTYENVDLVLIRENTEGEYSGIEHIV--------------------------CPGVVQSIKLITRDASERVIRY 171 (354)
T ss_dssp CCTTCCCSSCSCEEEEEEECSSEEEEEEEEEC--------------------------STTEEEEEEEEEHHHHHHHHHH
T ss_pred ccCCCCCCCCCccEEEEecCcCCcccCCcccc--------------------------cCCEEEEEEEEcHHHHHHHHHH
Confidence 7887776664 689999999999997654322 235664 799999999999999
Q ss_pred hhhchhc
Q psy12302 296 SFQVSFI 302 (303)
Q Consensus 296 ~Fq~al~ 302 (303)
+|++|..
T Consensus 172 AFe~A~~ 178 (354)
T 3blx_B 172 AFEYARA 178 (354)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999964
No 10
>2e0c_A 409AA long hypothetical NADP-dependent isocitrate dehydrogenase; homedimer, oxidoreductase; 2.00A {Sulfolobus tokodaii str} PDB: 2dht_A 2e5m_A*
Probab=99.75 E-value=2.8e-19 Score=167.97 Aligned_cols=149 Identities=16% Similarity=0.200 Sum_probs=113.1
Q ss_pred ccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeeccee-e
Q psy12302 138 DVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPII-C 216 (303)
Q Consensus 138 Dv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi-~ 216 (303)
++++.++|+|.+++|+|++.++-|+.+++|++++++|||+.||. .++|+|||.+||+.||+.++.+|+. +
T Consensus 60 ~i~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~LkGav~tP~---------~~~~~s~~l~LR~~LdlyanvRPv~~~ 130 (409)
T 2e0c_A 60 EIKWLEVYAGEKAEKLVNDRFPKETQEMLLKYRVVLKGPLETPI---------GKGWKSVNVAIRLMLDLYANIRPVKYI 130 (409)
T ss_dssp CCEEEECCCTHHHHHHHSCSSCHHHHHHHHHHCEEEECCCC-----------------CHHHHHHHHTTCCEEEEEEECC
T ss_pred ceEEEEEechHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCC---------cccccChhHHHHHHcCCEEEEEEEecc
Confidence 88999999999999999999999999999999999999999994 3579999999999999999999987 5
Q ss_pred cCCCCCCCCccc-ceEEEeeccCccccceeeEecCCceEEEE-EEcCCCceEEEEEEeecC-CCeEEEeccChhhHHHHH
Q psy12302 217 KNIPKIVPGWTN-SIVIGRHAHGDQYKATDLIVDKPGKVELV-YTDNQGKVQTFKVFEFKT-PGVALAMYNTTESIESFA 293 (303)
Q Consensus 217 knIp~iVpgW~~-pIvIgRHA~GDQYKAtD~vV~GpGk~eLV-yt~~~g~~~~~~v~~fk~-~GVal~myNt~eSI~~FA 293 (303)
+++|..++.|.+ +|+|.||..+|+|...++....++..+++ |+++.. . +.|.. .++.+.+| |.+.++.+|
T Consensus 131 ~g~~splk~~~~vDivIvREnteg~Y~g~e~~~~~~~~~~v~~f~~~~~-----~-~~~~~~~a~~~~~~-t~~~~eRia 203 (409)
T 2e0c_A 131 EGLESPLKHPEKVDMIIFRENTDDLYRGIEYPFNSEEAKKIRDFLRKEL-----K-VEIEDDTGIGIKVM-SKYKTQRIT 203 (409)
T ss_dssp TTCCCSBSCCTTCEEEEEEECSSGGGGCCEECTTSHHHHHHHHHHHHHS-----C-CCCCSSEEEEEEEE-EHHHHHHHH
T ss_pred CCCCCCCCCccCCcEEEEEcCCCCEeCCcccccCCCcccchhhccchhc-----c-ccCCCceEEEEEEe-cHHHHHHHH
Confidence 788877777876 99999999999999988764333322221 332211 1 23332 23444444 577899999
Q ss_pred HHhhhchhc
Q psy12302 294 HSSFQVSFI 302 (303)
Q Consensus 294 hs~Fq~al~ 302 (303)
|.+|++|..
T Consensus 204 r~AFe~A~~ 212 (409)
T 2e0c_A 204 RLAIQYAIE 212 (409)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999974
No 11
>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A*
Probab=99.74 E-value=9.6e-20 Score=172.58 Aligned_cols=151 Identities=13% Similarity=0.058 Sum_probs=121.1
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++.+||+|.+++|+|++.++-|+.+++|+++|++|||+.||. .++|+|||.+||+.||+.++.+|+.+
T Consensus 70 ~~i~~~~~~~G~~~~~~~G~~lp~etl~~~k~~da~LkGav~tP~---------~~~~~s~~l~LRk~LdlyanlRPv~~ 140 (435)
T 1tyo_A 70 RRIVWWELLAGHLAREKCGELLPKATLEGIRLARVALKGPLETPV---------GTGYRSLNVAIRQALDLYANIRPVRY 140 (435)
T ss_dssp CCCEEEECCCSHHHHHHHSSSSCHHHHHHHHHHSEEEECCCCCCT---------TSCTTHHHHHHHHHHTCCEEEEEEEC
T ss_pred cceEEEEEechHHHHHhhCCcCCHHHHHHHHhCCeEEECCccCCC---------cccccChhHHHHHHcCCEEEeEEEEe
Confidence 589999999999999999999999999999999999999999994 35899999999999999999999987
Q ss_pred cCCCCCCC-CcccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEE-EeccChhhHHHHHH
Q psy12302 217 KNIPKIVP-GWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVAL-AMYNTTESIESFAH 294 (303)
Q Consensus 217 knIp~iVp-gW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal-~myNt~eSI~~FAh 294 (303)
-++|..++ .|.-+++|.||..+|+|...++. .++|..+.++..-..+ . ...+ ..++|+ .+++|.++++.+||
T Consensus 141 ~gv~splk~~~~vDivIvREnTeg~Y~G~e~~-~~~~~~~~v~~~~~~~---~-~~~~-~~~~a~~~~~~T~~~~eRIar 214 (435)
T 1tyo_A 141 YGQPAPHKYADRVDMVIFRENTEDVYAGIEWP-HDSPEAARIRRFLAEE---F-GISI-REDAGIGVKPISRFATRRLME 214 (435)
T ss_dssp CSCCCSBTTGGGCEEEEEEECSSSGGGCCEEC-TTSHHHHHHHHHHHHH---H-CCCC-CTTEEEEEEEEEHHHHHHHHH
T ss_pred cCCCCCCCCcCCCcEEEEecCCCCeecccccc-cCCccccceeccchhh---c-cccC-CCCeEEEEEEecHHHHHHHHH
Confidence 77776654 38899999999999999998865 3444221111110000 0 0112 245665 49999999999999
Q ss_pred Hhhhchhc
Q psy12302 295 SSFQVSFI 302 (303)
Q Consensus 295 s~Fq~al~ 302 (303)
.+|++|..
T Consensus 215 ~AFe~A~~ 222 (435)
T 1tyo_A 215 RALEWALR 222 (435)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999963
No 12
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=99.74 E-value=1e-18 Score=160.73 Aligned_cols=135 Identities=17% Similarity=0.178 Sum_probs=115.5
Q ss_pred ccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceeec
Q psy12302 138 DVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIICK 217 (303)
Q Consensus 138 Dv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~k 217 (303)
++++++||+|.+++|+|++.++-|+.+++|++++++|||+.||+..+ ..+|+|||.+||+.||+.++.+|+ +
T Consensus 30 ~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~da~l~Gav~~P~~~~------~~~~~s~~l~lR~~ldlyan~RP~--~ 101 (337)
T 1w0d_A 30 GVQKTSYDLGARRFHATGEVLPDSVVAELRNHDAILLGAIGDPSVPS------GVLERGLLLRLRFELDHHINLRPA--R 101 (337)
T ss_dssp TCEEEECCCSHHHHHHHSCSSCHHHHHHHTTSSEEEEEECCCTTSCT------THHHHHTHHHHHHHTTCCEEEEEE--E
T ss_pred CcEEEEEecchHHHhhhCCcCCHHHHHHHHHCCEEEECCccCCCCCC------cccccchHHHHHHHcCCEEEEEEe--e
Confidence 38999999999999999999999999999999999999999996322 126899999999999999999996 4
Q ss_pred CCCCCCCCccc----ceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEE-EeccChhhHHHH
Q psy12302 218 NIPKIVPGWTN----SIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVAL-AMYNTTESIESF 292 (303)
Q Consensus 218 nIp~iVpgW~~----pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal-~myNt~eSI~~F 292 (303)
.+|.+...|++ +|+|.||..+|.|...+..+ .+|. ++++|. .+++|.+.++.+
T Consensus 102 ~~pg~~s~l~~~~~~DivivREnteg~Y~g~e~~~-~~g~---------------------~~~~a~~~~~~T~~~~eRi 159 (337)
T 1w0d_A 102 LYPGVASPLSGNPGIDFVVVREGTEGPYTGNGGAI-RVGT---------------------PNEVATEVSVNTAFGVRRV 159 (337)
T ss_dssp CCTTCCCSBTTCCCCEEEEEEECSCSGGGCCEEEE-STTS---------------------TTCEEEEEEEEEHHHHHHH
T ss_pred cCCCCCCcccCCCCCcEEEEecCCCCeecCCccee-cCCC---------------------CCCeEEEEEEEcHHHHHHH
Confidence 78888777874 99999999999998876654 2221 235554 799999999999
Q ss_pred HHHhhhchhc
Q psy12302 293 AHSSFQVSFI 302 (303)
Q Consensus 293 Ahs~Fq~al~ 302 (303)
||.+|++|..
T Consensus 160 ar~AFe~A~~ 169 (337)
T 1w0d_A 160 VADAFERARR 169 (337)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999964
No 13
>2iv0_A Isocitrate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, domain swapping, phosphorylation, aromatic cluster, NADP; 2.5A {Archaeoglobus fulgidus}
Probab=99.72 E-value=1.4e-18 Score=163.57 Aligned_cols=149 Identities=18% Similarity=0.187 Sum_probs=118.3
Q ss_pred ccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee-
Q psy12302 138 DVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC- 216 (303)
Q Consensus 138 Dv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~- 216 (303)
++++.++|+|.+++|+|++.++-|+.+++|++++++|||+.||. .++|+|||.+||+.||..++.+|+..
T Consensus 60 ~i~~~~~~~G~~~~~~~G~~lp~etl~~~k~~da~LkGav~tP~---------~~~~~s~~l~LR~~Ldlyan~RPv~~~ 130 (412)
T 2iv0_A 60 EVVWFQVYAGEDAYKLYGNYLPDDTLNAIKEFRVALKGPLTTPV---------GGGYRSLNVTIRQVLDLYANVRPVYYL 130 (412)
T ss_dssp CCEEEECCCSHHHHHHHSCSSCHHHHHHHHHHCEEEECCCCCCS---------SSSSSHHHHHHHHHTTCCEEEEEEECC
T ss_pred CeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCC---------CccccChhHHHHHHcCCeEEEEEEEec
Confidence 88999999999999999999999999999999999999999994 36899999999999999999999884
Q ss_pred cCCCCCCCCccc-ceEEEeeccCccccceeeEecCCceEEE-EEEcCCCceEEEEEEeec-CCCeEEEeccChhhHHHHH
Q psy12302 217 KNIPKIVPGWTN-SIVIGRHAHGDQYKATDLIVDKPGKVEL-VYTDNQGKVQTFKVFEFK-TPGVALAMYNTTESIESFA 293 (303)
Q Consensus 217 knIp~iVpgW~~-pIvIgRHA~GDQYKAtD~vV~GpGk~eL-Vyt~~~g~~~~~~v~~fk-~~GVal~myNt~eSI~~FA 293 (303)
+++|..++.|.+ .++|.||..+|+|...++....++..++ .|++.+.. +.|. +.++.+.+| |.+.++.+|
T Consensus 131 ~g~~splk~~~~vDivIvREnTeg~Y~G~e~~~~~~~~~~v~~~~~~~~~------~~~~~~~a~~~~~~-t~~~~eRia 203 (412)
T 2iv0_A 131 KGVPSPIKHPEKVNFVIFRENTEDVYAGIEWPRGSEEALKLIRFLKNEFG------VTIREDSGIGIKPI-SEFATKRLV 203 (412)
T ss_dssp TTSCCSBSCGGGCEEEEEEECSSSGGGCCEECTTCHHHHHHHHHHHHHHC------CCCCTTEEEEEEEE-EHHHHHHHH
T ss_pred CCCCCCCCCcCCCCEEEEecCCCCEeCCcccccCCccccchhhccccccc------ccCCCceEEEEEEe-cHHHHHHHH
Confidence 788877777876 8999999999999998876422222221 12222110 2333 234555565 455799999
Q ss_pred HHhhhchhc
Q psy12302 294 HSSFQVSFI 302 (303)
Q Consensus 294 hs~Fq~al~ 302 (303)
|.+|++|..
T Consensus 204 r~AFe~A~~ 212 (412)
T 2iv0_A 204 RMAIRYAIE 212 (412)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999974
No 14
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A
Probab=99.69 E-value=1.9e-17 Score=152.29 Aligned_cols=128 Identities=16% Similarity=0.173 Sum_probs=112.6
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++++||+|.+++|+|++.++-|+.+++|++++++|||+.||+..+ ++|+|||.+||+.||+.++.+|+
T Consensus 29 ~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~~-------~~~~s~~l~lR~~ldlyan~RP~-- 99 (333)
T 1x0l_A 29 LPLEFVEAEAGWETFERRGTSVPEETVEKILSCHATLFGAATSPTRKV-------PGFFGAIRYLRRRLDLYANVRPA-- 99 (333)
T ss_dssp CCEEEEEECCSHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCCSSCC-------TTCCCHHHHHHHHTTCCEEEEEE--
T ss_pred CCeEEEEEecchHHHHhhCCcCcHHHHHHHHHCCEEEECCccCCCCCC-------cCccChhHHHHHHcCCEEEEEEE--
Confidence 488999999999999999999999999999999999999999997543 48999999999999999999995
Q ss_pred cCCCCCCCCccc--ceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEE-EeccChhhHHHHH
Q psy12302 217 KNIPKIVPGWTN--SIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVAL-AMYNTTESIESFA 293 (303)
Q Consensus 217 knIp~iVpgW~~--pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal-~myNt~eSI~~FA 293 (303)
+++| + +.|.+ .++|.|+..+|.|...+.. ++++|. .+++|.+.++.+|
T Consensus 100 ~~~p-~-~s~~~~vD~vivREnteg~Y~g~~~~---------------------------~~~~a~~~~~~T~~~~eRia 150 (333)
T 1x0l_A 100 KSRP-V-PGSRPGVDLVIVRENTEGLYVEQERR---------------------------YLDVAIADAVISKKASERIG 150 (333)
T ss_dssp ECCS-S-TTCCSSCEEEEEEECGGGTCCCCEEE---------------------------ETTEEEEEEEEEHHHHHHHH
T ss_pred eecc-C-CCCCCCCCEEEEecCccceecccccc---------------------------CCCeEEEEEEecHHHHHHHH
Confidence 5888 4 77765 9999999999999764321 146665 7999999999999
Q ss_pred HHhhhchhc
Q psy12302 294 HSSFQVSFI 302 (303)
Q Consensus 294 hs~Fq~al~ 302 (303)
|.+|++|..
T Consensus 151 r~AF~~A~~ 159 (333)
T 1x0l_A 151 RAALRIAEG 159 (333)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999999974
No 15
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A*
Probab=99.68 E-value=4.6e-17 Score=150.72 Aligned_cols=126 Identities=16% Similarity=0.168 Sum_probs=109.0
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++++||+|. +|++.++-|+.+++|++++++|||+.||+. +++|+|||.+||+.||+.++.+|+
T Consensus 45 ~~i~~~~~~~G~----~~g~~lp~~tl~~~~~~da~l~Gav~~P~~--------~~~~~s~~l~lR~~ldlyan~RP~-- 110 (349)
T 3blx_A 45 IPIDWETINIKQ----TDHKEGVYEAVESLKRNKIGLKGLWHTPAD--------QTGHGSLNVALRKQLDIYANVALF-- 110 (349)
T ss_dssp CSEEEEECCCSS----TTCHHHHHHHHHHHHHHSEEEEEECCSHHH--------HHTCHHHHHHHHHTSCEEEEEEEE--
T ss_pred CCeEEEEEecCc----ccCCcCcHHHHHHHHHCCEEEECCccCCCC--------CCCccCchHHHHHHcCCEEEEEEE--
Confidence 488999999998 799999999999999999999999999964 238999999999999999999995
Q ss_pred cCCCCCCCCcc-cceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEE-EeccChhhHHHHHH
Q psy12302 217 KNIPKIVPGWT-NSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVAL-AMYNTTESIESFAH 294 (303)
Q Consensus 217 knIp~iVpgW~-~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal-~myNt~eSI~~FAh 294 (303)
+++|.+.+.+. -.++|.|+..+|.|...+..+ .+|+++ .++||.++++.+||
T Consensus 111 ~~~pg~~~~~~~vD~vivREnteg~Y~g~e~~~--------------------------~~gva~~~~~~T~~~~eRiar 164 (349)
T 3blx_A 111 KSLKGVKTRIPDIDLIVIRENTEGEFSGLEHES--------------------------VPGVVESLKVMTRPKTERIAR 164 (349)
T ss_dssp ECCTTCCCSSCSCEEEEEEECSSGGGGCEEEEC--------------------------STTEEEEEEEEEHHHHHHHHH
T ss_pred eccCCCCCCCCCcCEEEEecCCCCcEeCCceec--------------------------cCCeEEEEEEeCHHHHHHHHH
Confidence 47887766664 689999999999998755432 135665 69999999999999
Q ss_pred Hhhhchhc
Q psy12302 295 SSFQVSFI 302 (303)
Q Consensus 295 s~Fq~al~ 302 (303)
.+|++|..
T Consensus 165 ~AF~~A~~ 172 (349)
T 3blx_A 165 FAFDFAKK 172 (349)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999974
No 16
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans}
Probab=99.68 E-value=3.1e-18 Score=162.04 Aligned_cols=153 Identities=17% Similarity=0.164 Sum_probs=121.1
Q ss_pred cccccceeeCCCCccccCCC--hhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecce
Q psy12302 137 IDVECLYYDLGLPHRDATED--QVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPI 214 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~D--qVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePI 214 (303)
+++++.++|+|..++|+|++ .++-|+.+++|+++|++|||+.||.. ++|+|||.+||+.||+.++.+|+
T Consensus 61 ~~i~~~~~~~G~~~~~~~G~~~~lp~etl~~~k~~da~lkGav~tP~~---------~~~~s~~l~LRk~LdLyanvRPv 131 (429)
T 2d4v_A 61 RQIAWMELFAGQKAVQLYGEGQYLPDETMAAIREYKVAIKGPLETPVG---------GGIRSLNVAMRQDLDLYVCLRPV 131 (429)
T ss_dssp CCCEEEEECCTHHHHHHHCTTCSSCHHHHHHHHHHCEEEECCCCCCSS---------SSSCCHHHHHHHHTTCCEEEEEE
T ss_pred CceEEEEEeeehhhhhccCCCCCCcHHHHHHHHHCCEEEECCccCCCc---------ccccChhHHHHHHcCCEEEEEEE
Confidence 37899999999999999999 99999999999999999999999943 58999999999999999999998
Q ss_pred e-ecCCCCCCCCccc-ceEEEeeccCccccceeeEecCCceEEE-EEEcCCCceEEEEEEeec-CCCeEEEeccChhhHH
Q psy12302 215 I-CKNIPKIVPGWTN-SIVIGRHAHGDQYKATDLIVDKPGKVEL-VYTDNQGKVQTFKVFEFK-TPGVALAMYNTTESIE 290 (303)
Q Consensus 215 i-~knIp~iVpgW~~-pIvIgRHA~GDQYKAtD~vV~GpGk~eL-Vyt~~~g~~~~~~v~~fk-~~GVal~myNt~eSI~ 290 (303)
. ++++|..+..|.+ +|+|.||..+|+|...++....++..++ .|++.+.. ++.+.|. +.++.+.+| |.+.++
T Consensus 132 ~~~~gv~splk~~~~vDivIvREnTeg~Y~G~e~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~a~~~~~~-T~~~~e 207 (429)
T 2d4v_A 132 RYFEGTPSPMRHPEKVDMVIFRENSEDIYAGIEWPAGSPEAEKIIRFLREEMG---VTKIRFPDSSAIGIKPV-STEGSE 207 (429)
T ss_dssp ECCTTCCCSBSCGGGCEEEEEEECSCGGGGCCEECTTCHHHHHHHHHHHHTSC---CCCCSCGGGEEEEEEEE-EHHHHH
T ss_pred EecCCCCCCCCCcCCCCEEEEEeCCCCeecCcccccCCcccccceeccccccc---cccccCCCceEEEEEEe-cHHHHH
Confidence 6 5888877777866 9999999999999998876433332221 23333221 2234444 234555566 456679
Q ss_pred HHHHHhhhchhc
Q psy12302 291 SFAHSSFQVSFI 302 (303)
Q Consensus 291 ~FAhs~Fq~al~ 302 (303)
.+||.+|++|..
T Consensus 208 RIar~AFe~A~~ 219 (429)
T 2d4v_A 208 RLIRRTIQYALE 219 (429)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999974
No 17
>2y3z_A 3-isopropylmalate dehydrogenase; oxidoreductase, LEUB, leucine biosynthesis; HET: 2PE; 1.83A {Thermus thermophilus} PDB: 2y40_A 2y41_A* 2y42_A* 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1g2u_A 1gc9_A 1osj_A 1ipd_A 1gc8_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=99.67 E-value=2e-17 Score=153.59 Aligned_cols=135 Identities=13% Similarity=0.081 Sum_probs=116.2
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++++||+|.+++|+|++.++-|+.+++|++++++|||+.||+..+|.+ +++ +|+| |.+||+.||..++.+|+
T Consensus 35 ~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gavg~P~~~~~~~-~~~-~~~~-~l~LR~~ldlyanvRP~-- 109 (359)
T 2y3z_A 35 LGLAYEVFPFGGAAIDAFGEPFPEPTRKGVEEAEAVLLGSVGGPKWDGLPR-KIR-PETG-LLSLRKSQDLFANLRPA-- 109 (359)
T ss_dssp CCEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEECCCCCGGGTTSCG-GGC-HHHH-HHHHHHHTTEEEEEEEE--
T ss_pred CCeEEEEEeccHHHHHhhCCcCCHHHHHHHHHCCEEEEccccCCccccCCc-ccc-cchh-HHHHHHHhCCEEEEEEe--
Confidence 589999999999999999999999999999999999999999999888876 555 6878 99999999999999995
Q ss_pred cCCCCCCC--Cc------ccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeE-EEeccChh
Q psy12302 217 KNIPKIVP--GW------TNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVA-LAMYNTTE 287 (303)
Q Consensus 217 knIp~iVp--gW------~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVa-l~myNt~e 287 (303)
+.+|.+++ .| .-.++|.|+..+|.|...+..+ +.++| ..+++|.+
T Consensus 110 ~~~pgl~~~splk~~~~~~iD~vivREnteg~Y~g~e~~~--------------------------~~~~a~~~~~~T~~ 163 (359)
T 2y3z_A 110 KVFPGLERLSPLKEEIARGVDVLIVRELTGGIYFGEPRGM--------------------------SEAEAWNTERYSKP 163 (359)
T ss_dssp ECCTTCGGGSSSCHHHHTTCEEEEEEECSCSTTTCSSCEE--------------------------CSSCEECCCCCCHH
T ss_pred eccCCCCCCCCcccccCCCceEEEEecCccceEecCCCcC--------------------------CCceEEEEEEEcHH
Confidence 57888852 33 4689999999999997643210 23555 56999999
Q ss_pred hHHHHHHHhhhchhc
Q psy12302 288 SIESFAHSSFQVSFI 302 (303)
Q Consensus 288 SI~~FAhs~Fq~al~ 302 (303)
.++.+||.+|++|..
T Consensus 164 ~~eRIar~AFe~A~~ 178 (359)
T 2y3z_A 164 EVERVARVAFEAARK 178 (359)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999974
No 18
>1wpw_A 3-isopropylmalate dehydrogenase; oxidoreductase; 2.80A {Sulfolobus tokodaii} SCOP: c.77.1.1
Probab=99.66 E-value=9e-17 Score=147.98 Aligned_cols=125 Identities=22% Similarity=0.218 Sum_probs=108.9
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++++||+|.+++|+|++.++-|+.+++|++++++|||+.||. |. ||.+||+.||+.++++|+
T Consensus 33 ~~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~da~l~Gav~tP~------------~~-~~l~lR~~ldlyan~RP~-- 97 (336)
T 1wpw_A 33 LPIEYIEVEAGDRALARYGEALPKDSLKIIDKADIILKGPVGESA------------AD-VVVKLRQIYDMYANIRPA-- 97 (336)
T ss_dssp CCEEEEEECCSHHHHHHSSSSSCHHHHHHHHTCSEEEECCCCTTH------------HH-HHHHHHHTTTCCEEEEEE--
T ss_pred CCeEEEEEecchHHHHhhCCcCCHHHHHHHHHCCEEEECCcCCCC------------cc-hHHHHHHHhCCEEEEEEE--
Confidence 488999999999999999999999999999999999999999994 33 999999999999999996
Q ss_pred cCCCCCCCCcc-cceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEEEe-ccChhhHHHHHH
Q psy12302 217 KNIPKIVPGWT-NSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVALAM-YNTTESIESFAH 294 (303)
Q Consensus 217 knIp~iVpgW~-~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal~m-yNt~eSI~~FAh 294 (303)
+.+|.+.+.+. -.++|-|+..+|.|...+..+ .+|+|+.+ +||.++++.+||
T Consensus 98 ~~~pg~~~~~~~~D~vivREnteg~Y~g~~~~~--------------------------~~~va~~~~~~T~~~~eRiar 151 (336)
T 1wpw_A 98 KSIPGIDTKYGNVDILIVRENTEDLYKGFEHIV--------------------------SDGVAVGMKIITRFASERIAK 151 (336)
T ss_dssp ECCTTTCCSCSCCEEEEEEECSSBTTTCCEEEE--------------------------ETTEEEEEEEEEHHHHHHHHH
T ss_pred eccCCCCCCCCCCcEEEEecCccCeEcCCcccc--------------------------CCCeEEEEEEecHHHHHHHHH
Confidence 57777766664 689999999999996543220 35788775 999999999999
Q ss_pred Hhhhchhc
Q psy12302 295 SSFQVSFI 302 (303)
Q Consensus 295 s~Fq~al~ 302 (303)
.+|++|..
T Consensus 152 ~AF~~A~~ 159 (336)
T 1wpw_A 152 VGLNFALR 159 (336)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99999974
No 19
>3flk_A Tartrate dehydrogenase/decarboxylase; cytoplasm, lyase, magnesium, manganese, NAD, oxidoreductase; HET: NAD; 2.00A {Pseudomonas putida} PDB: 3fmx_X*
Probab=99.62 E-value=2e-16 Score=147.07 Aligned_cols=135 Identities=14% Similarity=0.107 Sum_probs=114.3
Q ss_pred cccccceeeCCC-CccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhccccc--CCchhhhhhhcCCeEeecc
Q psy12302 137 IDVECLYYDLGL-PHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMW--LSPNGTIRNILGGTVFREP 213 (303)
Q Consensus 137 iDv~~~yyDLgl-~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw--~SPNGtIRniLgGTVFReP 213 (303)
+++++++||+|. +++|+|.+.++-|+.+++|++++++|||+.||+. ++..| .|+|.+||+.||..+..+|
T Consensus 37 ~~~~~~~~~~G~~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~P~~-------~~~~~~~~s~~l~LR~~ldlyanvRP 109 (364)
T 3flk_A 37 LALEFDTFEWASCDYYLQHGKMMPDDWAEQLKQYDAIYFGAVGWPDK-------VPDHISLWGSLLKFRREFDQYVNIRP 109 (364)
T ss_dssp CCEEEEECCCSSHHHHHHHSSSSCTTHHHHHTTSSEEEEEECCBTTT-------BCHHHHHHTTHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEEeCCcHHHHhccCCcCCHHHHHHHHHCCEEEECCccCccc-------CCCCcCcccchHHHHHHhCCeEEEEE
Confidence 489999999999 9999999999999999999999999999999975 34445 8999999999999999999
Q ss_pred eeecCCCCCCCCc------ccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEE-EeccCh
Q psy12302 214 IICKNIPKIVPGW------TNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVAL-AMYNTT 286 (303)
Q Consensus 214 Ii~knIp~iVpgW------~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal-~myNt~ 286 (303)
|+.+|.+...+ .-.++|.|+..+|.|...+... +...++++|. .+++|.
T Consensus 110 --~~~~pg~~splk~~~~~~vD~vivREnteG~Y~g~~~~~----------------------~~~~~~~~a~~~~~~T~ 165 (364)
T 3flk_A 110 --VRLFPGVPCALANRKVGDIDFVVVRENTEGEYSSLGGIM----------------------FENTENEIVIQESIFTR 165 (364)
T ss_dssp --EECCTTCCCSBTTCCTTSSEEEEEEECSSBTCCCCEEEE----------------------STTSTTCEEEEEEEEEH
T ss_pred --EeccCCcccccccccCCCCCEEEEeeCCCceecCcCcee----------------------ccCCCCCEEEEEEEECH
Confidence 56777765444 4589999999999998864322 0112467777 599999
Q ss_pred hhHHHHHHHhhhchhc
Q psy12302 287 ESIESFAHSSFQVSFI 302 (303)
Q Consensus 287 eSI~~FAhs~Fq~al~ 302 (303)
+.++.+||.+|++|..
T Consensus 166 ~~~eRIar~AFe~A~~ 181 (364)
T 3flk_A 166 RGVDRILKYAFDLAEK 181 (364)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999963
No 20
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=99.59 E-value=6.4e-16 Score=143.42 Aligned_cols=140 Identities=11% Similarity=-0.005 Sum_probs=116.1
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++++||+|.+++|+|++.++-|+.+++|++++++|+|.-||..+++.. +++ .|.|||.++|+.||..++.+|+.
T Consensus 36 ~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~p~~~~~~~-~~~-~e~~~~l~LR~~ldlyanvRP~~- 112 (363)
T 1cnz_A 36 MRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPKWENLPP-ESQ-PERGALLPLRKHFKLFSNLRPAK- 112 (363)
T ss_dssp CCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTTSCG-GGS-TTHHHHHHHHHHHTCCEEEEEEE-
T ss_pred CceEEEEEeCChHHHhhcCCcCcHHHHHHHHHCCEEEEccccCCccccCCc-ccC-cccchHHHHHHHcCCEEEEEEEE-
Confidence 589999999999999999999999999999999999999999998777665 333 67899999999999999999955
Q ss_pred cCCCCCCC--Cccc-------ceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeE-EEeccCh
Q psy12302 217 KNIPKIVP--GWTN-------SIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVA-LAMYNTT 286 (303)
Q Consensus 217 knIp~iVp--gW~~-------pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVa-l~myNt~ 286 (303)
.+|.+++ .|++ .|+|.|+..+|.|...+ +.. +.. .+.++| ..+++|.
T Consensus 113 -~~pgl~~~splk~~~~~~~vDivivREnteg~Y~g~~------~~~----~~~------------~~~~~a~~~~~~T~ 169 (363)
T 1cnz_A 113 -LYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQP------KGR----EGS------------GQYEKAFDTEVYHR 169 (363)
T ss_dssp -CCTTCGGGCSBCHHHHHHCCEEEEEEECSSGGGTCSS------CEE----ECC------------GGGCEEEEEEEEEH
T ss_pred -ecCCccCCCCCcccccCCCCCEEEEecccCCeecCCc------Ccc----ccC------------CCCceEEEEEEEcH
Confidence 6788863 7865 49999999999997642 211 111 123444 5689999
Q ss_pred hhHHHHHHHhhhchhc
Q psy12302 287 ESIESFAHSSFQVSFI 302 (303)
Q Consensus 287 eSI~~FAhs~Fq~al~ 302 (303)
+.++.+||.+|++|..
T Consensus 170 ~~~eRiar~AFe~A~~ 185 (363)
T 1cnz_A 170 FEIERIARIAFESARK 185 (363)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999964
No 21
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI, protein structure initiative, joint center for structu genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1
Probab=99.58 E-value=1.1e-15 Score=142.52 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=115.3
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++++||+|.+++|+|.+.++-|+.+++|++++++|||+.||+..++. ++++.+|. ||.+||+.||..+..+|+.
T Consensus 44 ~~i~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~P~~~~~~-~~~r~~~~-~~l~LRk~ldlyaN~RP~~- 120 (366)
T 1vlc_A 44 KTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSVGGPKWDDLP-PEKRPEIG-GLLALRKMLNLYANIRPIK- 120 (366)
T ss_dssp CEEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEEEECCCGGGTTSC-STTSHHHH-THHHHHHHTTCCEEEEEEE-
T ss_pred CCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCccccCC-cccCcccc-hhHHHHHHhCCEEEEEEcc-
Confidence 48899999999999999999999999999999999999999999877665 55555422 5999999999999999965
Q ss_pred cCCCCCC--CCcc-------cceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEEEeccChh
Q psy12302 217 KNIPKIV--PGWT-------NSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVALAMYNTTE 287 (303)
Q Consensus 217 knIp~iV--pgW~-------~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal~myNt~e 287 (303)
.+|.+. ..|+ -+++|.|+..+|.|...+..+ + ..-+...+.+|.+
T Consensus 121 -~~pgl~~~splk~~~~~~~vDivIvREnteG~Y~g~~~~~-~------------------------~~~a~~~~~~Tr~ 174 (366)
T 1vlc_A 121 -VYRSLVHVSPLKEKVIGSGVDLVTVRELSYGVYYGQPRGL-D------------------------EEKGFDTMIYDRK 174 (366)
T ss_dssp -CCGGGGGGSSSCHHHHTTCCEEEEEEECSSGGGTEEEEEE-C------------------------SSCEEEECCCCHH
T ss_pred -ccCCCCCcCCCcccccCCCceEEEEEeCCCCeecCCcccc-C------------------------CCeEEEEEEEcHH
Confidence 578877 3665 489999999999998866542 0 1223466899999
Q ss_pred hHHHHHHHhhhchhc
Q psy12302 288 SIESFAHSSFQVSFI 302 (303)
Q Consensus 288 SI~~FAhs~Fq~al~ 302 (303)
.++.+||.+|++|..
T Consensus 175 ~~eRIar~AFe~A~~ 189 (366)
T 1vlc_A 175 TVERIARTAFEIAKN 189 (366)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999974
No 22
>3ty4_A Probable homoisocitrate dehydrogenase; B-hydroxyacid oxidative decarboxylase, amino-acid biosynthes lysine biosynthesis; 1.55A {Schizosaccharomyces pombe} SCOP: c.77.1.0 PDB: 3ty3_A
Probab=99.58 E-value=1.9e-15 Score=140.82 Aligned_cols=134 Identities=16% Similarity=0.163 Sum_probs=112.5
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHh-cccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeeccee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKH-NVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPII 215 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~-~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi 215 (303)
+++++.++|+|.+++|+|.+.++-|+.+++|++ ++++|||+.||...++ .|+|||.+||+.||..+..+|+
T Consensus 42 ~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~~da~L~Gavg~P~~~~~-------~~~s~~l~LRk~ldlyaNvRP~- 113 (366)
T 3ty4_A 42 LKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVA-------GYSSPIVALRKKMGLYANVRPV- 113 (366)
T ss_dssp CEEEEEECCCSHHHHHHHSCSSCHHHHHHHHHHCSEEEEEECCCCSSCCT-------TCCCHHHHHHHHTTCCEEEEEE-
T ss_pred CceEEEEecchHHHHHhhCCCCCHHHHHHHHHhCCEEEECCccCCCCCCc-------ccccchHHHHHHhCCeEEEEEE-
Confidence 588999999999999999999999999999996 9999999999975443 6899999999999999999994
Q ss_pred ecCCCCCCCCcccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEE-EeccChhhHHHHHH
Q psy12302 216 CKNIPKIVPGWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVAL-AMYNTTESIESFAH 294 (303)
Q Consensus 216 ~knIp~iVpgW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal-~myNt~eSI~~FAh 294 (303)
+.+|.+.+. .-.++|.|+..+|.|...+..+ ++..++++|. .+++|.+.++.+||
T Consensus 114 -~~~~g~~~~-~vD~vivREnTeG~Y~g~e~~~----------------------~~~~~~~~a~~~~~~Tr~~~eRIar 169 (366)
T 3ty4_A 114 -KSLDGAKGK-PVDLVIVRENTECLYVKEERMV----------------------QNTPGKRVAEAIRRISEEASTKIGK 169 (366)
T ss_dssp -ECCTTCSSS-CCEEEEEEECSCBGGGCCEEEE----------------------ECCTTCCEEEEEEEEEHHHHHHHHH
T ss_pred -eccCCCCCC-CCcEEEEeeCCCCEeecCccee----------------------ccCCCCceEEEEEEecHHHHHHHHH
Confidence 567665310 1349999999999999876543 1123457777 48999999999999
Q ss_pred Hhhhchhc
Q psy12302 295 SSFQVSFI 302 (303)
Q Consensus 295 s~Fq~al~ 302 (303)
.+|++|..
T Consensus 170 ~AFe~A~~ 177 (366)
T 3ty4_A 170 MAFEIAKS 177 (366)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999863
No 23
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, leucine biosynthesis; HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP: c.77.1.1
Probab=99.57 E-value=1.4e-15 Score=140.74 Aligned_cols=139 Identities=17% Similarity=0.109 Sum_probs=112.3
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++++||+|.+++|+|++.++-|+.+++|++++++|+|.-||..+.+. .+++. +.+ |.+||+.||+.++.+|+.
T Consensus 33 ~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gavg~p~~~~~~-~~~~~-e~~-ll~lRk~ldlyanvRP~~- 108 (358)
T 1a05_A 33 LGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDAYP-PAKRP-EQG-LLRLRKGLDLYANLRPAQ- 108 (358)
T ss_dssp CCCEEEECCCHHHHHHHHSSSSCHHHHHHHHHCSEEEEEECCCGGGTTSC-GGGSH-HHH-HHHHHHHHTCCEEEEEEE-
T ss_pred CceEEEEEeCCcHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCCcccCC-ccccc-hhh-HHHHHHHcCCEEEEEEEE-
Confidence 58999999999999999999999999999999999999999999866554 23332 344 999999999999999965
Q ss_pred cCCCCCC-CCccc-------ceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeE-EEeccChh
Q psy12302 217 KNIPKIV-PGWTN-------SIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVA-LAMYNTTE 287 (303)
Q Consensus 217 knIp~iV-pgW~~-------pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVa-l~myNt~e 287 (303)
.+|.++ ++|.+ +|+|.||..+|+|...+ +.. .+.+| .++| ..|+||.+
T Consensus 109 -~~pgl~~~splk~~~~~~vDivIvREnteg~Y~g~~------~~~----~~~~~------------~~~a~~~~~~T~~ 165 (358)
T 1a05_A 109 -IFPQLLDASPLRPELVRDVDILVVRELTGDIYFGQP------RGL----EVIDG------------KRRGFNTMVYDED 165 (358)
T ss_dssp -CCTTSGGGCSBCHHHHTTCEEEEEEECSSSTTTCSS------CEE----EEETT------------EEEEEEEEEEEHH
T ss_pred -ecCCccCCCCCccccCCCceEEEEEecCCCcccCCc------Ccc----ccCCC------------CceEEEEEEEcHH
Confidence 579986 47765 79999999999997642 221 11111 2233 45999999
Q ss_pred hHHHHHHHhhhchhc
Q psy12302 288 SIESFAHSSFQVSFI 302 (303)
Q Consensus 288 SI~~FAhs~Fq~al~ 302 (303)
+++.+||.+|++|..
T Consensus 166 ~~eRiar~AFe~A~~ 180 (358)
T 1a05_A 166 EIRRIAHVAFRAAQG 180 (358)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999974
No 24
>3dms_A Isocitrate dehydrogenase [NADP]; struc genomics, seattle structural genomics center for infectious ssgcid, glyoxylate bypass, manganese; 1.65A {Burkholderia pseudomallei} SCOP: c.77.1.1 PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 3lcb_C* 4aj3_A* 4aja_A* 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A ...
Probab=99.49 E-value=1.4e-14 Score=136.97 Aligned_cols=150 Identities=16% Similarity=0.154 Sum_probs=110.6
Q ss_pred cccccceeeCCCCccccCCC--hhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecce
Q psy12302 137 IDVECLYYDLGLPHRDATED--QVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPI 214 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~D--qVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePI 214 (303)
+++++.++|+|..++|+|.+ .++-|+.+++|++++++|||+.||.. ..|+|+|.+||+.||..+..+|+
T Consensus 71 ~~i~~~~~~~G~~a~~~~G~~~~lp~etl~~~k~~da~l~G~~~tP~~---------~~~~s~~l~LRk~LdLyaNlRPv 141 (427)
T 3dms_A 71 KKIHWMEIYAGEKATKVYGPDVWLPEETLQVLKEYVVSIKGPLTTPVG---------GGIRSLNVALRQELDLYVCLRPI 141 (427)
T ss_dssp CCCEEEEECCTHHHHHHHCTTCSSCHHHHHHHHHTCEEEECCCCCCC-------------CCHHHHHHHHTTCCEEEEEE
T ss_pred CceEEEEEeCCHHHHHhcCCCCCCCHHHHHHHHhcCEEEECCCCCCCC---------cccCChhHHHHHHhCCeEEEEEe
Confidence 48999999999999999999 99999999999999999999999964 36899999999999999999995
Q ss_pred eecCCCCCCCC----cccceEEEeeccCccccceeeEecCCceEEEE-E-EcCCCceEEEEEEeecCCCeEEE-eccChh
Q psy12302 215 ICKNIPKIVPG----WTNSIVIGRHAHGDQYKATDLIVDKPGKVELV-Y-TDNQGKVQTFKVFEFKTPGVALA-MYNTTE 287 (303)
Q Consensus 215 i~knIp~iVpg----W~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLV-y-t~~~g~~~~~~v~~fk~~GVal~-myNt~e 287 (303)
+.+|.+... +.-.++|.|+..||.|...++....++..+++ | +...|- . ...|. .++|++ +.+|.+
T Consensus 142 --~~~pg~~splk~~~~vDivIvREnTeG~Y~G~e~~~~~~~~~~~~~~~~~~~g~-~---~~~~~-~~~a~~~~~~Tr~ 214 (427)
T 3dms_A 142 --QYFKGVPSPVREPEKTNMVIFRENSEDIYAGIEWAAESEQAKKVIKFLQEEMGV-K---KIRFP-QTSGIGIKPVSKE 214 (427)
T ss_dssp --CCCTTCCCSSSCGGGCCEEEEEECSSGGGGCCEECTTCHHHHHHHHHHHHTSCC-C---CCSCG-GGCCEECCCCCHH
T ss_pred --ecCCCCCCCCCCCCCceEEEEEECCCCEecCcccccCCcccccccccccccccc-c---ccccC-CcceEEEEEecHH
Confidence 566665433 44559999999999999988764221100000 0 011111 0 01222 233433 578999
Q ss_pred hHHHHHHHhhhchhc
Q psy12302 288 SIESFAHSSFQVSFI 302 (303)
Q Consensus 288 SI~~FAhs~Fq~al~ 302 (303)
.++.+||.+|++|..
T Consensus 215 ~~eRIar~AFe~A~~ 229 (427)
T 3dms_A 215 GTERLVRKAIQYAID 229 (427)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999964
No 25
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase; HET: IPM; 1.48A {Shewanella benthica} PDB: 3vml_A* 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A* 3vl3_A*
Probab=99.37 E-value=2.8e-13 Score=126.71 Aligned_cols=140 Identities=14% Similarity=0.042 Sum_probs=115.0
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++.++|+|..+.|+|.+.++-|+.+++|++.+++|+|.-||...++. ..++.|.+||.+||+.||..+..+|+
T Consensus 45 ~~~~~~~~~~G~~~~~~~G~~lp~etl~~~~~~da~L~Gavg~P~~~~~~--~~~~~~~~~~l~LRk~ldLyaNvRP~-- 120 (375)
T 3vmk_A 45 LSIEYSEYDVGGAAIDNHGCPLPEATLKGCEAADAVLFGSVGGPKWEHLP--PNDQPERGALLPLRGHFELFCNMRPA-- 120 (375)
T ss_dssp CCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTTSC--STTSHHHHHHHHHHHHTTCCEEEEEE--
T ss_pred CCEEEEEEECCHHHHHhhCCcCCHHHHHHHHHCCeEEECCcCCCCccCCC--ccccccccchHHHHHHcCCeEEEEEE--
Confidence 58999999999999999999999999999999999999999999866554 34567889999999999999999995
Q ss_pred cCCCCCC---C------CcccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeE-EEeccCh
Q psy12302 217 KNIPKIV---P------GWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVA-LAMYNTT 286 (303)
Q Consensus 217 knIp~iV---p------gW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVa-l~myNt~ 286 (303)
+.+|.+. | .|.-.++|-|+..+|.|...+..+.. . .+.++| -.+.+|.
T Consensus 121 ~~~pg~~~~splk~~~~~~~vD~vIvREnTeG~Y~g~~~~~~~----------~------------~~~~~a~~~~~~Tr 178 (375)
T 3vmk_A 121 KLHPGLEHMSPLRSDISEKGFDILCVRELTGGIYFGKPKGRQG----------E------------GENEEAFDTMRYSR 178 (375)
T ss_dssp ECCTTCGGGSSBCHHHHTTCCEEEEEEECSSBTTTCSSCEEEC----------C------------GGGCEEEEEEEEEH
T ss_pred eccCCCcccCCCCcccccCCCCEEEEeeCCCCEecCCcccccc----------C------------CCCceEEEEEEEcH
Confidence 5566653 2 47789999999999999875332210 0 122344 3578999
Q ss_pred hhHHHHHHHhhhchhc
Q psy12302 287 ESIESFAHSSFQVSFI 302 (303)
Q Consensus 287 eSI~~FAhs~Fq~al~ 302 (303)
+.++.+||.+|++|..
T Consensus 179 ~~~eRIar~AFe~A~~ 194 (375)
T 3vmk_A 179 KEIRRIAKIAFESAQG 194 (375)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999964
No 26
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate and isopropylmalate dehydrogenases family, biosynthesis; 2.25A {Arabidopsis thaliana}
Probab=99.08 E-value=5.6e-11 Score=112.38 Aligned_cols=140 Identities=14% Similarity=0.085 Sum_probs=111.1
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++.++|+|..+.|+|.+.++-|+.+++|++++.+|+|.-||...++.. ...+.|+|.+||+.||..+..+| |
T Consensus 74 ~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~k~~daiL~Gavg~P~~~~~~~---~~~p~~~ll~LRk~ldLyaNlRP--~ 148 (405)
T 3r8w_A 74 VEFNFREMPIGGAALDLVGVPLPEETISAAKESDAVLLGAIGGYKWDNNEK---HLRPEKGLLQIRAALKVFANLRP--A 148 (405)
T ss_dssp CEEEEEECCCHHHHHHHHSSSSCHHHHHHHHHSSEEEEEECCCGGGTTSCG---GGSHHHHHHHHHHHHTCCEEEEE--E
T ss_pred CceEEEEEEcCHHHHHhhCCcCCHHHHHHHHHCCEEEEccccCCCccCCcc---ccCcccchHHHHHHhCCeEEEEE--e
Confidence 488999999999999999999999999999999999999999997655443 22345679999999999999999 4
Q ss_pred cCCCCCC--CCc------ccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCe-EEEeccChh
Q psy12302 217 KNIPKIV--PGW------TNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGV-ALAMYNTTE 287 (303)
Q Consensus 217 knIp~iV--pgW------~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GV-al~myNt~e 287 (303)
+.+|.++ ..+ .-.++|-|+..+|.|...+.... +..+|+ .+ ...+.+|.+
T Consensus 149 k~~~gl~~~splk~~~~~~vD~vIvREnTeG~Y~G~e~~~~---------~~~~~~------------~~a~~~~~~Tr~ 207 (405)
T 3r8w_A 149 TVLPQLVDASTLKREVAEGVDLMVVRELTGGIYFGEPRGIK---------TNENGE------------EVGFNTEVYAAH 207 (405)
T ss_dssp ECCGGGGGGSSBCHHHHTTCEEEEEEECSCSTTTCSSCEEE---------ECSSSC------------EEEEEEEEEEHH
T ss_pred eccCCccccCccccccCCCceEEEEeeCCCCeecCCccccc---------cCCCCc------------eEEEEEEEecHH
Confidence 5777774 233 34799999999999988654321 111121 12 235889999
Q ss_pred hHHHHHHHhhhchhc
Q psy12302 288 SIESFAHSSFQVSFI 302 (303)
Q Consensus 288 SI~~FAhs~Fq~al~ 302 (303)
.++.+||.+|++|..
T Consensus 208 ~~eRIar~AFe~A~~ 222 (405)
T 3r8w_A 208 EIDRIARVAFETARK 222 (405)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999963
No 27
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A
Probab=98.82 E-value=5.1e-09 Score=98.81 Aligned_cols=138 Identities=16% Similarity=0.081 Sum_probs=108.1
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++.++|+|....|+|.+.++-|+.+++|++.+.+|+|.-||....+.. ...+.|+|-+||+-||-.+.-+| |
T Consensus 55 ~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~daiL~Gavg~P~~~~~~~---~~~~~~~ll~LRk~ldLyANvRP--~ 129 (390)
T 3u1h_A 55 HEFEFEYGLIGGAAIDEAGTPLPEETLDVCRGSDAILLGAVGGPKWDQNPS---ELRPEKGLLGIRKGLDLFANLRP--V 129 (390)
T ss_dssp CCCEEEECCCTHHHHHSSSSSSCHHHHHHHHTSSEEEEEECCCSTTTSSCC---SSSSSCCHHHHHHHTTEEEEEEE--E
T ss_pred CCeEEEEEEcCHHHHHhhCCcCCHHHHHHHHHCCEEEECCcCCCCcCCCCc---ccCccchHHHHHHHhCCeEEEEE--e
Confidence 389999999999999999999999999999999999999999997543321 33466899999999999999999 6
Q ss_pred cCCCCCC--CCccc------ceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEE-EeccChh
Q psy12302 217 KNIPKIV--PGWTN------SIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVAL-AMYNTTE 287 (303)
Q Consensus 217 knIp~iV--pgW~~------pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal-~myNt~e 287 (303)
+.+|.+. ..++. .++|-|...+|.|-..+.....+ +..+|. .+.+|.+
T Consensus 130 k~~pg~~~~splk~~~~~~vD~vIVREnTeG~Y~g~~~~~~~~-----------------------g~~~a~~~~~~Tr~ 186 (390)
T 3u1h_A 130 KVYDSLADASPLKKEVIEGVDLVIVRELTGGLYFGEPSERYEE-----------------------GEEAAVDTLLYTRE 186 (390)
T ss_dssp ECCGGGTTSSSBCHHHHSSCEEEEEEECSSBSCC-------CT-----------------------TCSEEEEEEEEEHH
T ss_pred eccCCccccCCcccccccCCcEEEEeeCCCCeecCccccccCC-----------------------CCceEEEEEEecHH
Confidence 6788876 44543 57999999999998755443211 123343 5789999
Q ss_pred hHHHHHHHhhhchhc
Q psy12302 288 SIESFAHSSFQVSFI 302 (303)
Q Consensus 288 SI~~FAhs~Fq~al~ 302 (303)
.++..||..|++|..
T Consensus 187 ~~eRIar~AFe~A~~ 201 (390)
T 3u1h_A 187 EIERIIRKAFELALT 201 (390)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHhHHHHHHHHHHHH
Confidence 999999999999964
No 28
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.85A {Campylobacter jejuni} SCOP: c.77.1.1 PDB: 3udo_A
Probab=98.71 E-value=8.1e-09 Score=96.35 Aligned_cols=136 Identities=15% Similarity=0.073 Sum_probs=107.2
Q ss_pred cccccceeeCCCCccccCCChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceee
Q psy12302 137 IDVECLYYDLGLPHRDATEDQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIIC 216 (303)
Q Consensus 137 iDv~~~yyDLgl~~RD~T~DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~ 216 (303)
+++++.++|+|....++|.+.+.-|+.+++|++.+.+|+|.-||.-.++.. + .+.|.+||.+||+-||..+.-+| |
T Consensus 38 ~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~da~L~Gavg~P~~~~~~~-~-~~~~~~~~l~LRk~ldLyaNvRP--~ 113 (361)
T 3udu_A 38 FSFELNEAKIGGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNLPI-D-QRPERASLLPLRKHFNLFANLRP--C 113 (361)
T ss_dssp CEEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTTSCG-G-GSHHHHHHHHHHHHHTCCEEEEE--E
T ss_pred CCEEEEEEeccHHHHHhhCCcCCHHHHHHHHHCCcEEECCcCCCCcCCCCC-C-cCccccchHHHHHHcCCEEEEEE--e
Confidence 488999999999999999999999999999999999999999996544432 1 34566679999999999999999 5
Q ss_pred cCCCCCC---C------CcccceEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEeecCCCeEEEeccChh
Q psy12302 217 KNIPKIV---P------GWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFEFKTPGVALAMYNTTE 287 (303)
Q Consensus 217 knIp~iV---p------gW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~fk~~GVal~myNt~e 287 (303)
+.+|.+. | .-.-.++|-|...+|.|-..+..+ ...+.-.+.+|.+
T Consensus 114 ~~~pg~~~~splk~~~~~~~vD~vivREnTeG~Y~g~~~~~--------------------------~~~a~~~~~~Tr~ 167 (361)
T 3udu_A 114 KIYESLTHASPLKNEIIQKGVDILCVRELTGGIYFGKQDLG--------------------------KESAYDTEIYTKK 167 (361)
T ss_dssp ECCGGGGGGSSBCHHHHTTCCEEEEEEECSSGGGTSCEEEC--------------------------SSEEEEEEEEEHH
T ss_pred eccCCccccCCCccccccCCCcEEEEcccCCCeecCccCCc--------------------------CceEEEEEeccHH
Confidence 6777663 1 124468999999999997743211 0111124678999
Q ss_pred hHHHHHHHhhhchhc
Q psy12302 288 SIESFAHSSFQVSFI 302 (303)
Q Consensus 288 SI~~FAhs~Fq~al~ 302 (303)
.++.+||..|++|..
T Consensus 168 ~~eRIar~AFe~A~~ 182 (361)
T 3udu_A 168 EIERIARIAFESARI 182 (361)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999863
No 29
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=50.28 E-value=10 Score=30.15 Aligned_cols=66 Identities=12% Similarity=0.175 Sum_probs=44.2
Q ss_pred ccCCChhHHHHH-HHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhc-CCeEeecceeecC
Q psy12302 152 DATEDQVTVDAA-VAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNIL-GGTVFREPIICKN 218 (303)
Q Consensus 152 D~T~DqVtvDAA-~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniL-gGTVFRePIi~kn 218 (303)
|-.+|..+.+-- +.+.+.|++++.. +...+...++.+|+.-=.|.+..+.-++ .++.+++||++.+
T Consensus 33 di~~~~~~~~eL~~~~~~~g~p~~~l-~n~~~~~yk~l~l~~~~ls~~~~~~lm~~~P~LikRPiv~~~ 100 (141)
T 1s3c_A 33 LYLENPPSRDELVKLIADMGISVRAL-LRKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTP 100 (141)
T ss_dssp CTTTSCCCHHHHHHHHHHHTSCHHHH-BCSSSHHHHHTTTTSSCCCHHHHHHHHHHSGGGBCSCEEEET
T ss_pred ECCCCCccHHHHHHHhcccCCCHHHh-ccCCchhHHhcCCccccCCHHHHHHHHHhCccceEccEEEEC
Confidence 334444444433 3456677776544 4677788888888764446777766666 7899999999763
No 30
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=33.74 E-value=1.1e+02 Score=25.69 Aligned_cols=55 Identities=20% Similarity=0.207 Sum_probs=35.0
Q ss_pred eEEEeeccCccccceeeEecCCceEEEEEEcCCCceEEEEEEe------ecCCCeEEEeccCh
Q psy12302 230 IVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKVQTFKVFE------FKTPGVALAMYNTT 286 (303)
Q Consensus 230 IvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~~~~~v~~------fk~~GVal~myNt~ 286 (303)
++.|.|.|-++-. .-.++.|.+++.|- .+..|+...+.+-. +-.+|++-+|+|+.
T Consensus 283 ~~rg~h~h~~~~e-~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~ 343 (369)
T 3st7_A 283 ITKGNHWHHTKNE-KFLVVSGKGVIRFR-HVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLG 343 (369)
T ss_dssp CEEEEEECSSCCE-EEEEEESEEEEEEE-ETTCCCCEEEEEETTBCCEEEECTTEEEEEEECS
T ss_pred ceeccccccCcce-EEEEEeeeEEEEEE-cCCCCcEEEEEecCCcceEEEeCCCceEEeEEcC
Confidence 5678888865322 22334555555554 55577877777622 23689999999976
No 31
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=32.86 E-value=46 Score=25.55 Aligned_cols=68 Identities=13% Similarity=0.183 Sum_probs=48.3
Q ss_pred CccccCCChhHHHHHHH-HHHhcc-cccccccCchhhHHHhhhcccccCCchhhhhhhc-CCeEeecceeec
Q psy12302 149 PHRDATEDQVTVDAAVA-IKKHNV-GIKCATITPDEARVKEFKLKKMWLSPNGTIRNIL-GGTVFREPIICK 217 (303)
Q Consensus 149 ~~RD~T~DqVtvDAA~A-ikk~~V-giKCATITPdeaRVkEf~LKkmw~SPNGtIRniL-gGTVFRePIi~k 217 (303)
+.+|-.+|..+.+--.+ +.+.|+ +++ .=+...+...+|.+|+.--.|.+..+.-++ +++.+++||++.
T Consensus 33 ~~~di~~~~~~~~eL~~~l~~~g~~~~~-~l~n~~~~~~k~l~l~~~~ls~~~~~~lm~~~p~LikRPIv~~ 103 (121)
T 3rdw_A 33 QVVLYLETPPSVDKLKELLQQLGFSDAR-QLMRTKEDLYKTLNLDDRGLTQDQLLQAMADNPKLIERPIVVT 103 (121)
T ss_dssp EEECTTTSCCCHHHHHHHHHHTTCSSGG-GGBCTTSHHHHHTTTTCTTCCHHHHHHHHHHCGGGBCCCEEEE
T ss_pred EEEeeccCCCcHHHHHHHHHhcCCcCHH-HHhcCCChhhhhcCcccccCCHHHHHHHHHhCccceeCCEEEE
Confidence 34555666666665544 456676 654 346788889999999875557777777665 889999999975
No 32
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=31.42 E-value=21 Score=31.45 Aligned_cols=94 Identities=17% Similarity=0.297 Sum_probs=54.0
Q ss_pred ChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceeec-CCCCCCCCcccceEEEe
Q psy12302 156 DQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIICK-NIPKIVPGWTNSIVIGR 234 (303)
Q Consensus 156 DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~k-nIp~iVpgW~~pIvIgR 234 (303)
+.+|.++..-+.+|+=|+=|+.+|+ +|.++.+|..|... | +-+ .||-|.-+|=-+ .+.-=++.-...-.| |
T Consensus 40 e~~T~e~i~fm~~~~~GliC~~lt~--~~~~~L~Lp~mv~~-n-~~~---~~taFtVsVda~~g~tTGISA~DRa~Ti-~ 111 (204)
T 1tks_A 40 ELITQEKMAFLVRYSSGYVCVPLSE--ERANQLELPPMLAN-R-SDR---HGTAYTITCDFAEGTTTGISAHDRALTT-R 111 (204)
T ss_dssp GGCCHHHHHHHHHTBCSCCEEEEEH--HHHHHTTCCBSCC-----------CCCBBCCEEESTTCSSSCSHHHHHHHH-H
T ss_pred hhCCHHHHHHHHHhCCCcEEEEcCH--HHHhhCCCchhccc-c-CCC---CCCCeEEEEeccCCCCCCcCHHHHHHHH-H
Confidence 6789999999999999999999994 57789999999742 1 111 166666554422 111111111111122 3
Q ss_pred eccCccccceeeEecCCceEEEEEE
Q psy12302 235 HAHGDQYKATDLIVDKPGKVELVYT 259 (303)
Q Consensus 235 HA~GDQYKAtD~vV~GpGk~eLVyt 259 (303)
-+....=++.||+ .||.+-..--
T Consensus 112 ~l~~~~~~p~df~--rPGHvfPL~A 134 (204)
T 1tks_A 112 SLANPNSKPQDFI--KPGHILPLRA 134 (204)
T ss_dssp HHHCTTCCGGGEE--EEEEEEEEEE
T ss_pred HHhCCCCCHHHcC--CCCCcceeee
Confidence 3323335667776 4676554333
No 33
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=30.34 E-value=29 Score=30.56 Aligned_cols=53 Identities=17% Similarity=0.251 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeeccee
Q psy12302 156 DQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPII 215 (303)
Q Consensus 156 DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi 215 (303)
+.+|.+....+.+|+=|+=|+.+| ++|.++.+|..|... |. --.||-|--+|=
T Consensus 39 e~~T~e~i~fm~~~~~GliC~~lt--~~~a~~L~Lp~mv~~-n~----~~~~taftvsvd 91 (206)
T 3mio_A 39 EKATPEMVAFMVRYTSGYLCVPLD--GAICDRLGLLPMYAV-NQ----DKHGTAYTVTVD 91 (206)
T ss_dssp GGCCHHHHHHHHHHBCSCCEEEEC--HHHHHHTTCSCCC----------------CCCEE
T ss_pred HhCCHHHHHHHHHhCCCceEEECC--HHHHhhCCCCccccc-CC----CCCCCCeEEEEe
Confidence 678999999999999999999999 467789999999752 22 124566665543
No 34
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=24.82 E-value=69 Score=24.72 Aligned_cols=23 Identities=22% Similarity=0.479 Sum_probs=19.6
Q ss_pred cCCceEEEEEEcCCCceEEEEEE
Q psy12302 249 DKPGKVELVYTDNQGKVQTFKVF 271 (303)
Q Consensus 249 ~GpGk~eLVyt~~~g~~~~~~v~ 271 (303)
.+.|.++++-++.+|..+++.|=
T Consensus 57 ~~~Gdl~V~v~eadG~~~~~~vp 79 (90)
T 3fcg_A 57 GGSGELKVIIHESDGTKQVFTVP 79 (90)
T ss_dssp -CCEEEEEEEECTTSCEEEEEEE
T ss_pred CCceeEEEEEEECCCCEEEEEEC
Confidence 58899999999999998888763
No 35
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=24.41 E-value=45 Score=29.45 Aligned_cols=90 Identities=32% Similarity=0.368 Sum_probs=53.7
Q ss_pred ChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecceeec-CCCCCCCCcccceEEEe
Q psy12302 156 DQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPIICK-NIPKIVPGWTNSIVIGR 234 (303)
Q Consensus 156 DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePIi~k-nIp~iVpgW~~pIvIgR 234 (303)
+.+|.+....+.+|+-|+=|..|| ++|.++.+|..|... | +-+ .||-|.-||=-+ .+.-=+..+...-.| |
T Consensus 48 e~~T~e~i~fm~~~~~GliCl~lt--~~ra~~L~Lp~mv~~-n-~~~---~~taftVsvda~~g~tTGISa~DRa~Ti-~ 119 (217)
T 1g57_A 48 ETMTVEQMALTIRHGSGIVCLCIT--EDRRKQLDLPMMVEN-N-TSA---YGTGFTVTIEAAEGVTTGVSAADRITTV-R 119 (217)
T ss_dssp TTCCHHHHHHHHHHBCSCCEEEEC--HHHHHHTTCCBSCSS-C-CCT---TCCCBBSCEEESSSCSSSCSHHHHHHHH-H
T ss_pred hhCCHHHHHHHHHhCCCceEEECC--HHHHhhCCCcccccc-C-CCc---CCCceEEeeccccCCCCCcCHHHHHHHH-H
Confidence 678999999999999999999999 467788999988642 1 111 166666554422 121111122222222 2
Q ss_pred eccCccccceeeEecCCceEE
Q psy12302 235 HAHGDQYKATDLIVDKPGKVE 255 (303)
Q Consensus 235 HA~GDQYKAtD~vV~GpGk~e 255 (303)
-+-...=++.||+- ||.+-
T Consensus 120 ~lad~~~~~~Df~~--PGHvf 138 (217)
T 1g57_A 120 AAIADGAKPSDLNR--PGHVF 138 (217)
T ss_dssp HHHSTTCCGGGEEE--EEEEE
T ss_pred HHhCCCCCHHHcCC--CCCcc
Confidence 22233445677764 66643
No 36
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=23.47 E-value=45 Score=29.99 Aligned_cols=52 Identities=27% Similarity=0.521 Sum_probs=40.0
Q ss_pred ChhHHHHHHHHHHhcccccccccCchhhHHHhhhcccccCCchhhhhhhcCCeEeecce
Q psy12302 156 DQVTVDAAVAIKKHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNILGGTVFREPI 214 (303)
Q Consensus 156 DqVtvDAA~Aikk~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniLgGTVFRePI 214 (303)
+.+|.+...-+.+|+=|+=|+.+|+ +|.++.+|..|... |.. -.||-|.-.|
T Consensus 47 e~~T~e~i~fm~r~~~GliC~~lt~--e~~~~L~Lp~Mv~~-n~~----~~~TaFTVsV 98 (233)
T 1k4i_A 47 ESVTTEQMAFMVRHSSGLICAPLTP--ERTTALDLPQMVTH-NAD----PRGTAYTVSV 98 (233)
T ss_dssp GGCCHHHHHHHHHHBCSCCEEEECH--HHHHHTTCCBSCSS-CCC----SSCCCBBCCE
T ss_pred hhCCHHHHHHHHHcCCCCEEEEcCH--HHHhhCCCcccccc-cCC----CCCCCeEEEE
Confidence 6789999999999999999999995 56778999999753 221 2466666554
No 37
>2oxg_Z SOXZ protein; immunoglobulin-like beta-sandwich fold, transport protein; 1.40A {Paracoccus denitrificans} PDB: 2ox5_Z 2oxh_Z*
Probab=21.27 E-value=1.2e+02 Score=23.60 Aligned_cols=29 Identities=28% Similarity=0.496 Sum_probs=21.1
Q ss_pred ccccceeeEecCCceEEEEEEcCCCceEE
Q psy12302 239 DQYKATDLIVDKPGKVELVYTDNQGKVQT 267 (303)
Q Consensus 239 DQYKAtD~vV~GpGk~eLVyt~~~g~~~~ 267 (303)
+-|=.=.+...++|++++++++++|...+
T Consensus 72 NP~~~F~~~~~~~g~l~v~~~Dn~G~~~~ 100 (108)
T 2oxg_Z 72 NPYFEFDAKVDAAGEFKFTWYDDDGSVYE 100 (108)
T ss_dssp SCEEEEEEEECSSEEEEEEEEETTSCEEE
T ss_pred CCeEEEEEecCCCcEEEEEEEECCCCEEE
Confidence 44444556667789999999999996443
No 38
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=21.23 E-value=70 Score=24.24 Aligned_cols=66 Identities=18% Similarity=0.218 Sum_probs=44.0
Q ss_pred cccCCChhHHHHHHHHH-HhcccccccccCchhhHHHhhhcccccCCchhhhhhhc-CCeEeecceeec
Q psy12302 151 RDATEDQVTVDAAVAIK-KHNVGIKCATITPDEARVKEFKLKKMWLSPNGTIRNIL-GGTVFREPIICK 217 (303)
Q Consensus 151 RD~T~DqVtvDAA~Aik-k~~VgiKCATITPdeaRVkEf~LKkmw~SPNGtIRniL-gGTVFRePIi~k 217 (303)
+|-.+|..+.+--.++. +.|+|++- =+...+...++.+++.-=.|.+..+.-++ +++.+++||++.
T Consensus 30 ~di~~~~~~~~el~~~l~~~~~~~~~-l~n~~~~~~k~l~~~~~~ls~~~~~~~m~~~p~LikRPiv~~ 97 (120)
T 3l78_A 30 HNIMTSPLSRDELLKILSYTENGTED-IISTRSKVFQKLDIDVDELSVSELINLISKNPSLLRRPIIMD 97 (120)
T ss_dssp EETTTSCCCHHHHHHHHHHCSSTHHH-HBCTTCHHHHHTTCCGGGCCHHHHHHHHHHCGGGBCSCEEEC
T ss_pred EecccCCCcHHHHHHHHhhcCCCHHH-hhcCCcHHHHHcCCCcccCCHHHHHHHHHhCccceeccEEEE
Confidence 44455666666555544 45888763 35667888888887643236666666665 789999999975
No 39
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=20.91 E-value=80 Score=24.14 Aligned_cols=67 Identities=19% Similarity=0.276 Sum_probs=45.9
Q ss_pred ccccCCChhHHHHHH-HHHHhcccccccccCchhhHHHhhhccc--ccCCchhhhhhhc-CCeEeecceeec
Q psy12302 150 HRDATEDQVTVDAAV-AIKKHNVGIKCATITPDEARVKEFKLKK--MWLSPNGTIRNIL-GGTVFREPIICK 217 (303)
Q Consensus 150 ~RD~T~DqVtvDAA~-Aikk~~VgiKCATITPdeaRVkEf~LKk--mw~SPNGtIRniL-gGTVFRePIi~k 217 (303)
.+|-.+|..+.+--. .+.+.|++++ .=+...+...++.+|+. --.|.+..+.-++ .++.+++||++.
T Consensus 33 ~~di~~~~~~~~eL~~~l~~~g~~~~-~l~n~~~~~~k~l~l~~k~~~ls~~~~~~lm~~~p~LikRPiv~~ 103 (120)
T 3gkx_A 33 NRLIVDDNPTVEELKAWIPLSGLPVK-KFFNTSGVVYKELKLSSKLPTMTEEEQIALLATNGKLVKRPLVVT 103 (120)
T ss_dssp EEETTTTCCCHHHHHHHHHHHTSCGG-GGBCTTSHHHHHTTHHHHGGGSCHHHHHHHHTTCGGGBCSCEEEC
T ss_pred EEecccCcCCHHHHHHHHHHcCCCHH-HeEeCCCchhhhcCcchhcccCCHHHHHHHHHhChhheECcEEEE
Confidence 345556666665544 4566787766 34677788888888863 2347777777665 789999999975
No 40
>2ky8_A Methyl-CPG-binding domain protein 2; DNA binding domain, transcription-DNA complex; HET: DNA 5CM TED; NMR {Gallus gallus}
Probab=20.26 E-value=1.4e+02 Score=21.95 Aligned_cols=35 Identities=37% Similarity=0.728 Sum_probs=25.5
Q ss_pred CCCCCCCcccceEEEeeccCccccceeeEecCCceEEEEEEcCCCce
Q psy12302 219 IPKIVPGWTNSIVIGRHAHGDQYKATDLIVDKPGKVELVYTDNQGKV 265 (303)
Q Consensus 219 Ip~iVpgW~~pIvIgRHA~GDQYKAtD~vV~GpGk~eLVyt~~~g~~ 265 (303)
+|.+-+||+.-+++ |.. | ..+|+..+.|....|+.
T Consensus 10 ~p~Lp~GW~R~~~~-R~~-g----------~s~~k~DvyY~sP~Gkr 44 (72)
T 2ky8_A 10 CPALPPGWKKEEVI-RKS-G----------LSAGKSDVYYFSPSGKK 44 (72)
T ss_dssp CSSSCTTCEEEEEE-CCS-S----------TTTTCEEEEEECTTCCE
T ss_pred CCCCCCCCEEEEEE-ecC-C----------CCCCceEEEEECCCCCE
Confidence 67888999988776 331 1 13588889998888864
Done!